Psyllid ID: psy14567

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------24
Protein Sequence
MFIFAKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLNWEL
Secondary Structure (PSIPRED)
ccccccccccEEEEcccccccccHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHcccccEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccEEEccccccccccHHHHHHHHHccccccccccccHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHcccEEEEEccHHHccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHccccEEEEcccccHHHHHHHHcccccccEEEEcccccccEcHHHccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccEEEEEEccHHHccccccEHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEccEccHHHHHHcccHHHHHHHHHHccccccEcHHHHHHHHHHHHcccHccccc
Coil and Loop (DISEMBL)
mfifaklhpdrtntkggdypkpgigrCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAvarfdrfldideenlidsifdvnIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALelgpynirvnsvqPTVVMTqmgrtgwsdpakagpmlaktplgrfagklkpkpwnrwllpsvglnwel
Flexible Loop (DISEMBL)
mfifaklhpdrtntkggdypkpgIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAavskvgpvdvlinNAAVARFDRFLDIDEENLidsifdvniKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRfagklkpkpwnrwllpsvglnwel
Low Complexity Region (SEG)
MFIFAKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLNWEL
Disordered region (IsUnstruct)
*********************PGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS*******MLAKTPLGRFAGKLKPKPWNRWLLPSVGLNW**
Disordered Region (DISOPRED)
***FAKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLNWE*
Disordered Region (DISEMBL)
MFIFAKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLNWEL
Disordered Region (DISPRO)
MFIFAKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV*L****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFIFAKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLNWEL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	238	2.2.26 [Sep-21-2011]
Q91XV4	244	L-xylulose reductase OS=M	N/A	N/A	0.810	0.790	0.551	9e-54
Q91X52	244	L-xylulose reductase OS=M	yes	N/A	0.810	0.790	0.541	7e-53
Q920P0	244	L-xylulose reductase OS=R	yes	N/A	0.810	0.790	0.530	4e-52
Q1JP75	244	L-xylulose reductase OS=B	yes	N/A	0.810	0.790	0.530	6e-52
Q920N9	244	L-xylulose reductase OS=C	no	N/A	0.810	0.790	0.530	2e-51
Q7Z4W1	244	L-xylulose reductase OS=H	yes	N/A	0.810	0.790	0.510	6e-51
Q8JIS3	246	D-erythrulose reductase O	yes	N/A	0.810	0.784	0.479	9e-49
Q29529	244	Carbonyl reductase [NADPH	yes	N/A	0.810	0.790	0.458	6e-43
P08074	244	Carbonyl reductase [NADPH	no	N/A	0.810	0.790	0.422	1e-38
Q21929	251	Probable L-xylulose reduc	yes	N/A	0.810	0.768	0.432	5e-34

>sp|Q91XV4|DCXR_MESAU L-xylulose reductase OS=Mesocricetus auratus GN=DCXR PE=1 SV=1

 Score =  209 bits (533), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 107/194 (55%), Positives = 138/194 (71%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V  L    A ++A+S+TQA+LDSL    P V+TV VDL DW  T  A+S VGPV
Sbjct: 18  GIGRSTVLALQAAGAHVVAVSRTQADLDSLVSECPGVETVCVDLADWEATEQALSSVGPV 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAAVA    FL++ +E   D  F+VN++AVI +SQ+V++ MI     G+IVNVSS
Sbjct: 78  DLLVNNAAVALLQPFLEVTKEAF-DMSFNVNLRAVIQVSQIVARGMIARGAPGAIVNVSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A + AL  H++Y ++K ALD +T+ MALELGP+ IRVN+V PTVVMT MGRT WSDP K
Sbjct: 137 QASQRALANHSVYCSTKGALDMLTKMMALELGPHKIRVNAVNPTVVMTSMGRTNWSDPHK 196

Query: 203 AGPMLAKTPLGRFA 216
           A  ML + PLG+FA
Sbjct: 197 AKVMLDRIPLGKFA 210

Catalyzes the NADPH-dependent reduction of several pentoses, tetroses, trioses, alpha-dicarbonyl compounds and L-xylulose. Participates in the uronate cycle of glucose metabolism. May play a role in the water absorption and cellular osmoregulation in the proximal renal tubules by producing xylitol, an osmolyte, thereby preventing osmolytic stress from occurring in the renal tubules.
Mesocricetus auratus (taxid: 10036)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 0

>sp|Q91X52|DCXR_MOUSE L-xylulose reductase OS=Mus musculus GN=Dcxr PE=2 SV=2

 Score =  207 bits (526), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 105/194 (54%), Positives = 138/194 (71%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V  L    A ++A+S+T+ +LD L +  P V+ V VDL DW  T  A+S VGPV
Sbjct: 18  GIGRSTVLALKAAGAQVVAVSRTREDLDDLVRECPGVEPVCVDLADWEATEQALSNVGPV 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAAVA    FL++ +E   D+ F+VN++AVI +SQ+V+K MI   + G+IVNVSS
Sbjct: 78  DLLVNNAAVALLQPFLEVTKEA-CDTSFNVNLRAVIQVSQIVAKGMIARGVPGAIVNVSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A + AL  HT+Y ++K ALD +T+ MALELGP+ IRVN+V PTVVMT MGRT WSDP K
Sbjct: 137 QASQRALTNHTVYCSTKGALDMLTKMMALELGPHKIRVNAVNPTVVMTPMGRTNWSDPHK 196

Query: 203 AGPMLAKTPLGRFA 216
           A  ML + PLG+FA
Sbjct: 197 AKAMLDRIPLGKFA 210

Catalyzes the NADPH-dependent reduction of several pentoses, tetroses, trioses, alpha-dicarbonyl compounds and L-xylulose. Participates in the uronate cycle of glucose metabolism. May play a role in the water absorption and cellular osmoregulation in the proximal renal tubules by producing xylitol, an osmolyte, thereby preventing osmolytic stress from occurring in the renal tubules.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

>sp|Q920P0|DCXR_RAT L-xylulose reductase OS=Rattus norvegicus GN=Dcxr PE=1 SV=1

 Score =  204 bits (519), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 103/194 (53%), Positives = 137/194 (70%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V  L    A ++A+S+T+ +LDSL +  P V+ V VDL DW  T  A+S VGPV
Sbjct: 18  GIGRSTVLALQAAGAQVVAVSRTREDLDSLVRECPGVEPVCVDLADWEATEQALSNVGPV 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAAVA    FL++ +E   D+ F+VN +AV+ +SQ+V++ MI   + G+IVNVSS
Sbjct: 78  DLLVNNAAVATLQPFLEVTKEA-CDTSFNVNFRAVVQVSQIVARGMIARGVPGAIVNVSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A + AL  HT+Y ++K ALD +T+ MALELGP+ IRVN+V PTVVMT MGR  WSDP K
Sbjct: 137 QASQRALTNHTVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTPMGRANWSDPHK 196

Query: 203 AGPMLAKTPLGRFA 216
           A  ML + PLG+FA
Sbjct: 197 AKVMLDRIPLGKFA 210

Catalyzes the NADPH-dependent reduction of several pentoses, tetroses, trioses, alpha-dicarbonyl compounds and L-xylulose. Participates in the uronate cycle of glucose metabolism. May play a role in the water absorption and cellular osmoregulation in the proximal renal tubules by producing xylitol, an osmolyte, thereby preventing osmolytic stress from occurring in the renal tubules.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

>sp|Q1JP75|DCXR_BOVIN L-xylulose reductase OS=Bos taurus GN=DCXR PE=2 SV=1

 Score =  204 bits (518), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 103/194 (53%), Positives = 137/194 (70%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR IV+ L    A ++A+S+TQA+LDSL +  P V+TV VDL DW  T  A+  VGPV
Sbjct: 18  GIGRSIVKALHAAGARVVAVSRTQADLDSLVRECPGVETVCVDLADWEATEQALGGVGPV 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAAVA    FL++ +E   D  F VN++AVI +SQ+V++ +I     G IVNVSS
Sbjct: 78  DLLVNNAAVAFLQPFLEVTKEAY-DMSFSVNLRAVIQVSQIVARGLIARGAPGVIVNVSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A +  L  H++Y ++K ALD++T+ MA+ELGP+ IRVN+V PTVVMT MG+  WSDP K
Sbjct: 137 QASQRGLTNHSVYCSTKGALDTLTKVMAVELGPHKIRVNAVNPTVVMTPMGQAAWSDPQK 196

Query: 203 AGPMLAKTPLGRFA 216
           A  ML + PLGRFA
Sbjct: 197 AKAMLDRIPLGRFA 210

Catalyzes the NADPH-dependent reduction of several pentoses, tetroses, trioses, alpha-dicarbonyl compounds and L-xylulose. Participates in the uronate cycle of glucose metabolism. May play a role in the water absorption and cellular osmoregulation in the proximal renal tubules by producing xylitol, an osmolyte, thereby preventing osmolytic stress from occurring in the renal tubules.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

>sp|Q920N9|DCXR_CAVPO L-xylulose reductase OS=Cavia porcellus GN=DCXR PE=2 SV=1

 Score =  202 bits (514), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 103/194 (53%), Positives = 136/194 (70%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V  L    A ++A+S+T+ +LD L +  P V+ V VDL DW  T  A+S VGP 
Sbjct: 18  GIGRSTVLALKAAGAQVVAVSRTREDLDDLVRECPGVEPVCVDLADWEATEQALSNVGPA 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAAVA    FL++ +E  + S F+VN++AVI +SQ+V+K MI   + G+IVNVSS
Sbjct: 78  DLLVNNAAVALLQPFLEVTKEACVTS-FNVNLRAVIQVSQIVAKGMIARGVPGAIVNVSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A + AL  HT+Y ++K AL  +T+ MALELGP+ IRVN+V PTVVMT MGRT WSDP K
Sbjct: 137 QASQRALTNHTVYCSTKGALYMLTKMMALELGPHKIRVNAVNPTVVMTPMGRTNWSDPHK 196

Query: 203 AGPMLAKTPLGRFA 216
           A  ML + PLG+FA
Sbjct: 197 AKAMLDRIPLGKFA 210

Catalyzes the NADPH-dependent reduction of several pentoses, tetroses, trioses, alpha-dicarbonyl compounds and L-xylulose. Participates in the uronate cycle of glucose metabolism. May play a role in the water absorption and cellular osmoregulation in the proximal renal tubules by producing xylitol, an osmolyte, thereby preventing osmolytic stress from occurring in the renal tubules.

Cavia porcellus (taxid: 10141)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

>sp|Q7Z4W1|DCXR_HUMAN L-xylulose reductase OS=Homo sapiens GN=DCXR PE=1 SV=2

 Score =  200 bits (509), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 99/194 (51%), Positives = 137/194 (70%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V+ L    A ++A+S+TQA+LDSL +  P ++ V VDL DW  T  A+  VGPV
Sbjct: 18  GIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPV 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAAVA    FL++ +E   D  F+VN++AVI +SQ+V++ +I   + G+IVNVSS
Sbjct: 78  DLLVNNAAVALLQPFLEVTKEAF-DRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
              + A+  H++Y ++K ALD +T+ MALELGP+ IRVN+V PTVVMT MG+  WSDP K
Sbjct: 137 QCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK 196

Query: 203 AGPMLAKTPLGRFA 216
           A  ML + PLG+FA
Sbjct: 197 AKTMLNRIPLGKFA 210

Catalyzes the NADPH-dependent reduction of several pentoses, tetroses, trioses, alpha-dicarbonyl compounds and L-xylulose. Participates in the uronate cycle of glucose metabolism. May play a role in the water absorption and cellular osmoregulation in the proximal renal tubules by producing xylitol, an osmolyte, thereby preventing osmolytic stress from occurring in the renal tubules.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

>sp|Q8JIS3|DER_CHICK D-erythrulose reductase OS=Gallus gallus GN=DER PE=1 SV=1

 Score =  193 bits (490), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 93/194 (47%), Positives = 134/194 (69%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR +   L +  A + ALS+T A+L+SL +  P ++ + +DL DW  T AAV   GP 
Sbjct: 20  GIGRAVAVALCKAGARVTALSRTAADLESLVRECPGIEPLCLDLADWDATEAAVGAAGPF 79

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           ++L+NNAAVA    FL +  E  ++  FDVN +AV+++SQ+V++ MI   + G+IVNVSS
Sbjct: 80  ELLVNNAAVAMLQPFLQVTREA-VERSFDVNFRAVLHVSQIVARQMIAQGLPGAIVNVSS 138

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A + AL  H +Y ++K+ALD +++ MA+ELGP+ IRVN+V PTVVMT MGR  WSDP K
Sbjct: 139 QASQRALRDHAVYCSTKSALDMLSKVMAMELGPHKIRVNTVNPTVVMTDMGRINWSDPQK 198

Query: 203 AGPMLAKTPLGRFA 216
           +  M+ + PLG+FA
Sbjct: 199 SAAMINRIPLGKFA 212

Catalyzes the reduction of D-erythrulose to D-threitol with the concomitant oxidation of NAD(P)H to NAD(P)(+). NADH is less effective than NADPH. May also catalyze the reduction of L-xylulose.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

>sp|Q29529|CBR2_PIG Carbonyl reductase [NADPH] 2 OS=Sus scrofa GN=CBR2 PE=1 SV=1

 Score =  174 bits (440), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 89/194 (45%), Positives = 129/194 (66%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V+ L    A ++A+++T  +L SL Q  P ++ V VDL DW  T  A+  VGPV
Sbjct: 18  GIGRDTVKALHVSGARVVAVTRTNGDLVSLSQECPGIEPVCVDLGDWEATERALGGVGPV 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAAVA    FLD  +E + D  F+VN+++V  +SQ+V+++MI+  + GSIVNVSS
Sbjct: 78  DLLVNNAAVALMQPFLDTTKE-VFDRSFNVNLRSVFQVSQIVARSMIERGVPGSIVNVSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
           +       G   YS++K A+  +T++MA+ELGP+ IRVNSV PTVV+T MGR+  SDP  
Sbjct: 137 MVSHVTYPGLAAYSSTKGAMTMLTKSMAMELGPHKIRVNSVNPTVVLTAMGRSVTSDPEL 196

Query: 203 AGPMLAKTPLGRFA 216
           A  +  + P+ +FA
Sbjct: 197 ARKLKERHPMRKFA 210

May function in the pulmonary metabolism of endogenous carbonyl compounds, such as aliphatic aldehydes and ketones derived from lipid peroxidation, 3-ketosteroids and fatty aldehydes, as well as in xenobiotic metabolism.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|P08074|CBR2_MOUSE Carbonyl reductase [NADPH] 2 OS=Mus musculus GN=Cbr2 PE=1 SV=1

 Score =  159 bits (403), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 124/194 (63%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V+ L    A ++A+++T ++L SL +  P ++ V VDL DW  T  A+  +GPV
Sbjct: 18  GIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPV 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAA+     FL++ +E   D  F VN+++V  +SQ+V++ MI+  + GSIVNVSS
Sbjct: 78  DLLVNNAALVIMQPFLEVTKEAF-DRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
           +           YS++K A+  +T+ MA+ELGP+ IRVNSV PTVV+T MG+   +DP  
Sbjct: 137 MVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEF 196

Query: 203 AGPMLAKTPLGRFA 216
           A  +  + PL +FA
Sbjct: 197 ARKLKERHPLRKFA 210

May function in the pulmonary metabolism of endogenous carbonyl compounds, such as aliphatic aldehydes and ketones derived from lipid peroxidation, 3-ketosteroids and fatty aldehydes, as well as in xenobiotic metabolism.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q21929|DCXR_CAEEL Probable L-xylulose reductase OS=Caenorhabditis elegans GN=dhs-21 PE=3 SV=2

 Score =  144 bits (363), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 86/199 (43%), Positives = 124/199 (62%), Gaps = 6/199 (3%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQ-TVQVDLQDWARTRAAVSKV-- 79
           GIG+ I   L++  A +IA ++ +ANL SL +   +++ T+   + D +     + K+  
Sbjct: 20  GIGKEICLSLAKAGAQVIAFARNEANLLSLVKETTSLRYTIIPIVGDVSANEEVLFKLIV 79

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
              P+  L+NNA +A       I +++ ID  F VN++  I I+Q+V++  +D +I+GSI
Sbjct: 80  PHFPIHGLVNNAGIATNHAIGQITQQS-IDRTFAVNVRGPILIAQLVARNFVDRQIKGSI 138

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           VN+SS A    L+ HT+Y ASKAALD +TR +A ELG  NIRVNSV PTVVMT MGR  W
Sbjct: 139 VNISSQAAIRPLDNHTVYCASKAALDMVTRCLANELGSQNIRVNSVNPTVVMTDMGRDNW 198

Query: 198 SDPAKAGPMLAKTPLGRFA 216
           SDP K   ML + P+ RFA
Sbjct: 199 SDPDKKKKMLDRMPIKRFA 217

Catalyzes the NADPH-dependent reduction of L-xylulose, D-xylulose, D-fructose, and L-sorbose, with the highest affinity for L-xylulose.

Caenorhabditis elegans (taxid: 6239)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 0

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
307172668	243	L-xylulose reductase [Camponotus florida	0.806	0.790	0.569	7e-56
327265093	243	PREDICTED: d-erythrulose reductase-like	0.810	0.794	0.556	1e-55
156553661	244	PREDICTED: L-xylulose reductase [Nasonia	0.810	0.790	0.556	2e-55
357607458	244	L-xylulose reductase [Danaus plexippus]	0.806	0.786	0.564	5e-55
48139441	244	PREDICTED: l-xylulose reductase [Apis me	0.810	0.790	0.541	5e-55
321476922	244	hypothetical protein DAPPUDRAFT_305430 [	0.810	0.790	0.556	7e-55
380022687	244	PREDICTED: L-xylulose reductase-like [Ap	0.810	0.790	0.541	1e-54
383866021	244	PREDICTED: L-xylulose reductase-like [Me	0.810	0.790	0.530	2e-54
45360849	244	L-xylulose reductase [Xenopus (Silurana)	0.810	0.790	0.556	3e-54
340716447	244	PREDICTED: l-xylulose reductase-like [Bo	0.810	0.790	0.541	4e-54

>gi|307172668|gb|EFN64011.1| L-xylulose reductase [Camponotus floridanus]

 Score =  223 bits (567), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 110/193 (56%), Positives = 144/193 (74%), Gaps = 1/193 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIG+ +V +LS+++A + ALSKT+ NLDSL  A P +  + VDL+DW  TR AV  + P+
Sbjct: 18  GIGKELVLRLSKYKAEVFALSKTKKNLDSLVAADPKIHPICVDLRDWDATRKAVENILPI 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNA VA    FLD   E   D  FDVN+KAV+N+SQV++K MI+ K  G+IVN+SS
Sbjct: 78  DLLVNNAGVACLTPFLDATPEEF-DLTFDVNVKAVLNVSQVIAKNMIERKSGGNIVNISS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            AG+ AL+ H +Y ASK AL+ + +TMALELGPYNIRVN+V PTVVMT+MG+ GWSDP K
Sbjct: 137 QAGQAALKDHAVYCASKGALNMLFKTMALELGPYNIRVNAVGPTVVMTEMGKLGWSDPQK 196

Query: 203 AGPMLAKTPLGRF 215
           A  M++K PLGRF
Sbjct: 197 AQDMISKIPLGRF 209

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|327265093|ref|XP_003217343.1| PREDICTED: d-erythrulose reductase-like [Anolis carolinensis]

 Score =  222 bits (565), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 108/194 (55%), Positives = 146/194 (75%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR +   LS+  A ++A+S+TQA+LD LK+  P +QT+ VDL DW  T+AA+S+V  +
Sbjct: 17  GIGRALALALSRKGAQVLAVSRTQAHLDGLKEECPGIQTLCVDLGDWDATKAALSQVENI 76

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAAVA    FL + +E   D  FDVN++AV+ +SQ+V++ MI   + G+IVNVSS
Sbjct: 77  DLLVNNAAVAVLQPFLQVTKEAF-DRSFDVNLRAVLQVSQIVAQKMIARGVHGAIVNVSS 135

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A   AL+ HTIY ++K+ALD +T++MALELGPY IRVNSV PTVVMT MGR  W+DP K
Sbjct: 136 QASHRALKDHTIYCSTKSALDMLTKSMALELGPYGIRVNSVNPTVVMTDMGRLNWTDPEK 195

Query: 203 AGPMLAKTPLGRFA 216
           AGPML++ PLG+FA
Sbjct: 196 AGPMLSRIPLGKFA 209

Source: Anolis carolinensis

Species: Anolis carolinensis

Genus: Anolis

Family: Iguanidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|156553661|ref|XP_001601301.1| PREDICTED: L-xylulose reductase [Nasonia vitripennis]

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 108/194 (55%), Positives = 143/194 (73%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR    +LS+    +IALSKT+ANLDSL +  P +QTV  DLQDW + RAAV  V P+
Sbjct: 18  GIGRETALRLSKFGGTVIALSKTKANLDSLVKEDPKIQTVCADLQDWNKARAAVKSVLPI 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNA +A  D FL +  E+  D +F+VN+K++IN+SQVV++ MI  K+ GSIVN+SS
Sbjct: 78  DLLVNNAGIAILDPFLSLKPEDF-DQVFNVNLKSIINVSQVVAENMIQRKVAGSIVNLSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
           +A   A++ H IY ++KAALD +T+ MALELGP+NIRVN+V PT+VMT MG+  WSDPAK
Sbjct: 137 VASLVAVKDHAIYCSAKAALDMLTKVMALELGPHNIRVNTVNPTLVMTAMGKANWSDPAK 196

Query: 203 AGPMLAKTPLGRFA 216
           A  +  K PL RFA
Sbjct: 197 AATLREKIPLDRFA 210

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357607458|gb|EHJ65500.1| L-xylulose reductase [Danaus plexippus]

 Score =  220 bits (560), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 109/193 (56%), Positives = 143/193 (74%), Gaps = 1/193 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           G+GR I  +L +  A I+A+SKT+++L+SL+  +P++  V VD+ DW +TR  +  +G  
Sbjct: 18  GVGRGIAVELWRAGANIVAISKTRSHLESLQSEYPSIDIVDVDISDWEKTREVIDSLGHF 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D L+NNAAVA  + FL     N  D +FDVN+KAV+NISQVV+K MID+K QG+IVN+SS
Sbjct: 78  DALVNNAAVAICEPFLTC-SPNDFDRMFDVNVKAVLNISQVVAKKMIDNKTQGAIVNISS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A K AL+ H IYSASKAALDS+TR MALELG Y IRVN+V PTV+MT M + GWSDP K
Sbjct: 137 QASKAALKDHAIYSASKAALDSLTRVMALELGAYGIRVNAVNPTVIMTAMAKVGWSDPVK 196

Query: 203 AGPMLAKTPLGRF 215
           +  M++K PLGRF
Sbjct: 197 SSEMISKIPLGRF 209

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48139441|ref|XP_397008.1| PREDICTED: l-xylulose reductase [Apis mellifera]

 Score =  220 bits (560), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 105/194 (54%), Positives = 141/194 (72%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIG+ +  +LS++E  +IALSK + NLD L +  P +Q + VDL DW  TR AV  V P+
Sbjct: 18  GIGKDLALRLSKYEGQVIALSKKKENLDKLCKEDPRIQFICVDLSDWNATRKAVESVLPI 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNA VA  + F D   E+  D  F VN+KA++N+SQ+V+K MI+ K+ GSIVN+SS
Sbjct: 78  DLLVNNAGVAHLNSFFDATPEDF-DLTFTVNVKAILNVSQIVAKNMIERKVGGSIVNISS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A + AL+ H +Y ASK A+D +++TMALELGPYNIRVN+V PTV++T+MG+ GWSDP K
Sbjct: 137 QASQAALKDHVVYCASKGAVDMLSKTMALELGPYNIRVNTVNPTVILTEMGKLGWSDPKK 196

Query: 203 AGPMLAKTPLGRFA 216
           A  ML K PLGRF 
Sbjct: 197 ARTMLDKIPLGRFG 210

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321476922|gb|EFX87881.1| hypothetical protein DAPPUDRAFT_305430 [Daphnia pulex]

 Score =  219 bits (558), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 108/194 (55%), Positives = 140/194 (72%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR I ++L +H A + ALSKT  NL  L++  P + TV VDL+DW  T+ AV  +G +
Sbjct: 18  GIGRAIAKRLFEHGAKVYALSKTSENLRKLQEEAPGILTVIVDLEDWEATQKAVKDLGHI 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNA VA  + FLDI  E+  D +F+VN+KAV+N+SQ V K MI  K  GSIVNVSS
Sbjct: 78  DLLVNNAGVAILESFLDIKSESF-DKVFNVNLKAVVNVSQTVVKQMIADKTGGSIVNVSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A + AL  H IY ++K+ALD +++ MALELG + IRVN V PTVV+T+MG+ GWSDP K
Sbjct: 137 QASQAALRDHAIYCSTKSALDMLSKVMALELGQHKIRVNCVNPTVVLTEMGKLGWSDPLK 196

Query: 203 AGPMLAKTPLGRFA 216
           +GPMLA  PLGRFA
Sbjct: 197 SGPMLAGIPLGRFA 210

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380022687|ref|XP_003695170.1| PREDICTED: L-xylulose reductase-like [Apis florea]

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 105/194 (54%), Positives = 139/194 (71%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIG+ +  +LS++E  +IALSK + NLD L    P +Q + VDL DW  TR AV  V P+
Sbjct: 18  GIGKDLALRLSKYEGQVIALSKEKNNLDKLCTEDPRIQCICVDLSDWDATRKAVESVLPI 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNA VA  + F D   E+  D  F VN+KA++N+SQ+++K MI  K+ GSIVN+SS
Sbjct: 78  DLLVNNAGVAHLNSFFDATPEDF-DLTFTVNVKAILNVSQIIAKNMIQRKVGGSIVNISS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A + AL+ H IY ASK A+D +++TMALELGPYNIRVN+V PTV++T+MG+ GWSDP K
Sbjct: 137 QASQAALKDHVIYCASKGAVDMLSKTMALELGPYNIRVNTVNPTVILTEMGKLGWSDPEK 196

Query: 203 AGPMLAKTPLGRFA 216
           A  ML K PLGRF 
Sbjct: 197 ARTMLDKIPLGRFG 210

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383866021|ref|XP_003708470.1| PREDICTED: L-xylulose reductase-like [Megachile rotundata]

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 103/194 (53%), Positives = 144/194 (74%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR +  +LS+++  +IALS+T+ NLD L    P +++V VDL+DW  T+ AV  V P+
Sbjct: 18  GIGRDLALRLSEYKGEVIALSRTKKNLDKLCAEDPRIRSVCVDLRDWDATKKAVESVLPI 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNA VA    FLD   E+  D  F VN+K+++N+SQVV++ MI+ K+ GSIVN+SS
Sbjct: 78  DLLVNNAGVAHLKPFLDATAEDF-DETFAVNVKSILNVSQVVARNMIERKVAGSIVNISS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A + AL+ H +Y +SK A+D +++TMALELGP+NIRVN+V PTV+MT+MG+ GWSDP K
Sbjct: 137 QASQAALKDHAVYCSSKGAVDMLSKTMALELGPHNIRVNTVNPTVIMTEMGKLGWSDPDK 196

Query: 203 AGPMLAKTPLGRFA 216
           A  ML+K PLGRF 
Sbjct: 197 ARTMLSKIPLGRFG 210

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|45360849|ref|NP_989100.1| L-xylulose reductase [Xenopus (Silurana) tropicalis] gi|38566280|gb|AAH62504.1| diacetyl/L-xylulose reductase [Xenopus (Silurana) tropicalis] gi|89269097|emb|CAJ81504.1| dicarbonyl/L-xylulose reductase [Xenopus (Silurana) tropicalis]

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 108/194 (55%), Positives = 140/194 (72%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V+ L +  A ++ALS+T  +L+SL Q  P VQTV VDL DW+ T  A+S +GPV
Sbjct: 18  GIGRETVKALRKTGAEVVALSRTFEDLESLAQECPGVQTVCVDLADWSATEKALSSIGPV 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAAVA    FL + EE   D  F VN+KAV+++SQ+V   MI+  + G+IVNVSS
Sbjct: 78  DLLVNNAAVAVLQPFLAVTEEAF-DKSFAVNVKAVLHVSQIVVHQMIERGVPGAIVNVSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A + AL+ H++Y A+K ALD +T+ M LELGP  IRVNSV PTVVMT+MGR GWSDP K
Sbjct: 137 QASQCALQDHSVYCATKGALDMLTKVMTLELGPKKIRVNSVNPTVVMTEMGRIGWSDPQK 196

Query: 203 AGPMLAKTPLGRFA 216
           + PML + P+GRFA
Sbjct: 197 SEPMLKRIPMGRFA 210

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|340716447|ref|XP_003396709.1| PREDICTED: l-xylulose reductase-like [Bombus terrestris]

 Score =  217 bits (552), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 105/194 (54%), Positives = 142/194 (73%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIG+ +  +LS +   +IALSKT+ NL+ L    P +Q V VDL DW  TR AV  V P+
Sbjct: 18  GIGKELALRLSDYGGQVIALSKTKQNLEQLCAEDPRIQIVCVDLNDWNATRKAVENVLPI 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNA VAR + F D  EE+  D  F +N+K+++N+SQVV+K +I+ K+ GSIVNVSS
Sbjct: 78  DLLVNNAGVARLNPFFDATEEDF-DVTFAINVKSMLNVSQVVAKNLIERKVGGSIVNVSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A + AL  HT+Y +SK A+D +++TMALELGP+NIRVN+V PTV+MT+MG+ GWSDP K
Sbjct: 137 QASQAALLDHTVYCSSKGAVDMLSKTMALELGPHNIRVNTVNPTVIMTEMGKLGWSDPNK 196

Query: 203 AGPMLAKTPLGRFA 216
           A  M++K PLGRF 
Sbjct: 197 AQTMISKIPLGRFG 210

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	238
UNIPROTKB|Q91XV4	244	DCXR "L-xylulose reductase" [M	0.810	0.790	0.551	7.4e-50
MGI|MGI:1915130	244	Dcxr "dicarbonyl L-xylulose re	0.810	0.790	0.541	3.2e-49
RGD|620031	244	Dcxr "dicarbonyl L-xylulose re	0.810	0.790	0.530	1.4e-48
UNIPROTKB|J3QS36	225	DCXR "L-xylulose reductase" [H	0.869	0.92	0.490	2.3e-48
UNIPROTKB|Q1JP75	244	DCXR "L-xylulose reductase" [B	0.810	0.790	0.530	2.9e-48
ZFIN|ZDB-GENE-030131-7002	244	dcxr "dicarbonyl/L-xylulose re	0.810	0.790	0.510	3.7e-48
UNIPROTKB|Q920N9	244	DCXR "L-xylulose reductase" [C	0.810	0.790	0.530	7.7e-48
UNIPROTKB|Q7Z4W1	244	DCXR "L-xylulose reductase" [H	0.810	0.790	0.510	2e-47
UNIPROTKB|E2QY46	244	DCXR "Uncharacterized protein"	0.810	0.790	0.5	8.8e-47
UNIPROTKB|J3KS22	224	DCXR "L-xylulose reductase" [H	0.810	0.861	0.505	1.1e-46

UNIPROTKB|Q91XV4 DCXR "L-xylulose reductase" [Mesocricetus auratus (taxid:10036)]

 Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
 Identities = 107/194 (55%), Positives = 138/194 (71%)

Query:    23 GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
             GIGR  V  L    A ++A+S+TQA+LDSL    P V+TV VDL DW  T  A+S VGPV
Sbjct:    18 GIGRSTVLALQAAGAHVVAVSRTQADLDSLVSECPGVETVCVDLADWEATEQALSSVGPV 77

Query:    83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
             D+L+NNAAVA    FL++ +E   D  F+VN++AVI +SQ+V++ MI     G+IVNVSS
Sbjct:    78 DLLVNNAAVALLQPFLEVTKE-AFDMSFNVNLRAVIQVSQIVARGMIARGAPGAIVNVSS 136

Query:   143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
              A + AL  H++Y ++K ALD +T+ MALELGP+ IRVN+V PTVVMT MGRT WSDP K
Sbjct:   137 QASQRALANHSVYCSTKGALDMLTKMMALELGPHKIRVNAVNPTVVMTSMGRTNWSDPHK 196

Query:   203 AGPMLAKTPLGRFA 216
             A  ML + PLG+FA
Sbjct:   197 AKVMLDRIPLGKFA 210

GO:0005997 "xylulose metabolic process" evidence=IDA

GO:0006006 "glucose metabolic process" evidence=IDA

GO:0050038 "L-xylulose reductase (NADP+) activity" evidence=IDA

GO:0051289 "protein homotetramerization" evidence=IDA

MGI|MGI:1915130 Dcxr "dicarbonyl L-xylulose reductase" [Mus musculus (taxid:10090)]

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 105/194 (54%), Positives = 138/194 (71%)

Query:    23 GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
             GIGR  V  L    A ++A+S+T+ +LD L +  P V+ V VDL DW  T  A+S VGPV
Sbjct:    18 GIGRSTVLALKAAGAQVVAVSRTREDLDDLVRECPGVEPVCVDLADWEATEQALSNVGPV 77

Query:    83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
             D+L+NNAAVA    FL++ +E   D+ F+VN++AVI +SQ+V+K MI   + G+IVNVSS
Sbjct:    78 DLLVNNAAVALLQPFLEVTKE-ACDTSFNVNLRAVIQVSQIVAKGMIARGVPGAIVNVSS 136

Query:   143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
              A + AL  HT+Y ++K ALD +T+ MALELGP+ IRVN+V PTVVMT MGRT WSDP K
Sbjct:   137 QASQRALTNHTVYCSTKGALDMLTKMMALELGPHKIRVNAVNPTVVMTPMGRTNWSDPHK 196

Query:   203 AGPMLAKTPLGRFA 216
             A  ML + PLG+FA
Sbjct:   197 AKAMLDRIPLGKFA 210

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005881 "cytoplasmic microtubule" evidence=ISO

GO:0005886 "plasma membrane" evidence=IEA

GO:0005902 "microvillus" evidence=IDA

GO:0005903 "brush border" evidence=IDA

GO:0005975 "carbohydrate metabolic process" evidence=IEA

GO:0005997 "xylulose metabolic process" evidence=ISO;IDA

GO:0006006 "glucose metabolic process" evidence=ISO;IDA

GO:0006739 "NADP metabolic process" evidence=IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=IDA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=ISO

GO:0042732 "D-xylose metabolic process" evidence=IEA

GO:0050038 "L-xylulose reductase (NADP+) activity" evidence=ISO;IDA

GO:0051289 "protein homotetramerization" evidence=ISO;IDA

GO:0055114 "oxidation-reduction process" evidence=IEA;ISO;IDA

RGD|620031 Dcxr "dicarbonyl L-xylulose reductase" [Rattus norvegicus (taxid:10116)]

 Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
 Identities = 103/194 (53%), Positives = 137/194 (70%)

Query:    23 GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
             GIGR  V  L    A ++A+S+T+ +LDSL +  P V+ V VDL DW  T  A+S VGPV
Sbjct:    18 GIGRSTVLALQAAGAQVVAVSRTREDLDSLVRECPGVEPVCVDLADWEATEQALSNVGPV 77

Query:    83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
             D+L+NNAAVA    FL++ +E   D+ F+VN +AV+ +SQ+V++ MI   + G+IVNVSS
Sbjct:    78 DLLVNNAAVATLQPFLEVTKE-ACDTSFNVNFRAVVQVSQIVARGMIARGVPGAIVNVSS 136

Query:   143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
              A + AL  HT+Y ++K ALD +T+ MALELGP+ IRVN+V PTVVMT MGR  WSDP K
Sbjct:   137 QASQRALTNHTVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTPMGRANWSDPHK 196

Query:   203 AGPMLAKTPLGRFA 216
             A  ML + PLG+FA
Sbjct:   197 AKVMLDRIPLGKFA 210

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005881 "cytoplasmic microtubule" evidence=ISO

GO:0005902 "microvillus" evidence=IEA;ISO

GO:0005903 "brush border" evidence=IEA;ISO

GO:0005997 "xylulose metabolic process" evidence=ISO;IDA

GO:0006006 "glucose metabolic process" evidence=ISO;IDA

GO:0006739 "NADP metabolic process" evidence=IEA;ISO

GO:0016020 "membrane" evidence=IEA

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=ISO

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=IEA;ISO

GO:0042732 "D-xylose metabolic process" evidence=IEA

GO:0050038 "L-xylulose reductase (NADP+) activity" evidence=ISO;IDA

GO:0051289 "protein homotetramerization" evidence=ISO;IDA

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|J3QS36 DCXR "L-xylulose reductase" [Homo sapiens (taxid:9606)]

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 103/210 (49%), Positives = 146/210 (69%)

Query:    23 GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
             GIGR  V+ L    A ++A+S+TQA+LDSL +  P ++ V VDL DW  T  A+  VGPV
Sbjct:    17 GIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPV 76

Query:    83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
             D+L+NNAAVA    FL++ +E   D  F+VN++AVI +SQ+V++ +I   + G+IVNVSS
Sbjct:    77 DLLVNNAAVALLQPFLEVTKE-AFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS 135

Query:   143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
                + A+  H++Y ++K ALD +T+ MALELGP+ IRVN+V PTVVMT MG+  WSDP K
Sbjct:   136 QCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK 195

Query:   203 AGPMLAKTPLGRFAGKLKPKPWNRWLLPSV 232
             A  ML + PLG+FAG+    P +  ++P+V
Sbjct:   196 AKTMLNRIPLGKFAGESGGSPAS--VVPAV 223

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|Q1JP75 DCXR "L-xylulose reductase" [Bos taurus (taxid:9913)]

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 103/194 (53%), Positives = 137/194 (70%)

Query:    23 GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
             GIGR IV+ L    A ++A+S+TQA+LDSL +  P V+TV VDL DW  T  A+  VGPV
Sbjct:    18 GIGRSIVKALHAAGARVVAVSRTQADLDSLVRECPGVETVCVDLADWEATEQALGGVGPV 77

Query:    83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
             D+L+NNAAVA    FL++ +E   D  F VN++AVI +SQ+V++ +I     G IVNVSS
Sbjct:    78 DLLVNNAAVAFLQPFLEVTKE-AYDMSFSVNLRAVIQVSQIVARGLIARGAPGVIVNVSS 136

Query:   143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
              A +  L  H++Y ++K ALD++T+ MA+ELGP+ IRVN+V PTVVMT MG+  WSDP K
Sbjct:   137 QASQRGLTNHSVYCSTKGALDTLTKVMAVELGPHKIRVNAVNPTVVMTPMGQAAWSDPQK 196

Query:   203 AGPMLAKTPLGRFA 216
             A  ML + PLGRFA
Sbjct:   197 AKAMLDRIPLGRFA 210

GO:0016020 "membrane" evidence=IEA

GO:0051289 "protein homotetramerization" evidence=IEA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=IEA

GO:0006739 "NADP metabolic process" evidence=IEA

GO:0006006 "glucose metabolic process" evidence=IEA

GO:0005997 "xylulose metabolic process" evidence=IEA

GO:0005903 "brush border" evidence=IEA

GO:0005902 "microvillus" evidence=IEA

GO:0050038 "L-xylulose reductase (NADP+) activity" evidence=IEA

GO:0042732 "D-xylose metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

ZFIN|ZDB-GENE-030131-7002 dcxr "dicarbonyl/L-xylulose reductase" [Danio rerio (taxid:7955)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 99/194 (51%), Positives = 140/194 (72%)

Query:    23 GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
             GIGR     L++  + + A+++T+A+LDSL Q  P+++ V VDL DW  T+ A++ VGPV
Sbjct:    18 GIGRATALALARCGSEVTAVTRTKADLDSLVQECPSIKPVCVDLSDWDATKEALNNVGPV 77

Query:    83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
             D+L+NNAA A+   FLD+  +   D  F++N+KA ++++Q+V++ M      GSIVNVSS
Sbjct:    78 DLLVNNAACAKLQPFLDVTPDQF-DMSFNINVKAALHVAQIVARGMKARGTGGSIVNVSS 136

Query:   143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
              A + AL+ H +Y A+KAALD +TR MALELGP+ IRVNSV PTVVMT+MG+ GWSDP K
Sbjct:   137 QASQCALKDHAVYCATKAALDMLTRVMALELGPHQIRVNSVNPTVVMTEMGKIGWSDPEK 196

Query:   203 AGPMLAKTPLGRFA 216
             A  M ++ PLG+FA
Sbjct:   197 ARSMTSRIPLGKFA 210

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|Q920N9 DCXR "L-xylulose reductase" [Cavia porcellus (taxid:10141)]

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 103/194 (53%), Positives = 136/194 (70%)

Query:    23 GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
             GIGR  V  L    A ++A+S+T+ +LD L +  P V+ V VDL DW  T  A+S VGP 
Sbjct:    18 GIGRSTVLALKAAGAQVVAVSRTREDLDDLVRECPGVEPVCVDLADWEATEQALSNVGPA 77

Query:    83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
             D+L+NNAAVA    FL++ +E  + S F+VN++AVI +SQ+V+K MI   + G+IVNVSS
Sbjct:    78 DLLVNNAAVALLQPFLEVTKEACVTS-FNVNLRAVIQVSQIVAKGMIARGVPGAIVNVSS 136

Query:   143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
              A + AL  HT+Y ++K AL  +T+ MALELGP+ IRVN+V PTVVMT MGRT WSDP K
Sbjct:   137 QASQRALTNHTVYCSTKGALYMLTKMMALELGPHKIRVNAVNPTVVMTPMGRTNWSDPHK 196

Query:   203 AGPMLAKTPLGRFA 216
             A  ML + PLG+FA
Sbjct:   197 AKAMLDRIPLGKFA 210

GO:0005997 "xylulose metabolic process" evidence=IDA

GO:0006006 "glucose metabolic process" evidence=IDA

GO:0050038 "L-xylulose reductase (NADP+) activity" evidence=IDA

GO:0051289 "protein homotetramerization" evidence=IDA

UNIPROTKB|Q7Z4W1 DCXR "L-xylulose reductase" [Homo sapiens (taxid:9606)]

 Score = 496 (179.7 bits), Expect = 2.0e-47, P = 2.0e-47
 Identities = 99/194 (51%), Positives = 137/194 (70%)

Query:    23 GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
             GIGR  V+ L    A ++A+S+TQA+LDSL +  P ++ V VDL DW  T  A+  VGPV
Sbjct:    18 GIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPV 77

Query:    83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
             D+L+NNAAVA    FL++ +E   D  F+VN++AVI +SQ+V++ +I   + G+IVNVSS
Sbjct:    78 DLLVNNAAVALLQPFLEVTKE-AFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS 136

Query:   143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
                + A+  H++Y ++K ALD +T+ MALELGP+ IRVN+V PTVVMT MG+  WSDP K
Sbjct:   137 QCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK 196

Query:   203 AGPMLAKTPLGRFA 216
             A  ML + PLG+FA
Sbjct:   197 AKTMLNRIPLGKFA 210

GO:0000166 "nucleotide binding" evidence=IEA

GO:0042732 "D-xylose metabolic process" evidence=IEA

GO:0005902 "microvillus" evidence=IEA

GO:0005903 "brush border" evidence=IEA

GO:0006739 "NADP metabolic process" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0050038 "L-xylulose reductase (NADP+) activity" evidence=IDA

GO:0005997 "xylulose metabolic process" evidence=IDA

GO:0006006 "glucose metabolic process" evidence=IDA

GO:0051289 "protein homotetramerization" evidence=IDA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=IDA

GO:0055114 "oxidation-reduction process" evidence=IDA

GO:0005881 "cytoplasmic microtubule" evidence=IDA

UNIPROTKB|E2QY46 DCXR "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 97/194 (50%), Positives = 136/194 (70%)

Query:    23 GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
             GIGR  V+ L      ++A+S+TQA+LDSL +  P V+ V VDL DW  T  A+  VGPV
Sbjct:    18 GIGRSTVQALHAMGVQVVAVSRTQADLDSLVRECPGVEPVCVDLGDWEATERALGSVGPV 77

Query:    83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
             D+L+NNAAVA    FL++ +E   D+ F VN++A+I +SQ+V++ +I     GSIVN+SS
Sbjct:    78 DLLVNNAAVALLQPFLEVTKE-ACDTSFHVNLRAIIQVSQIVARGLIARGAPGSIVNISS 136

Query:   143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
              A + A+  H++Y ++K A+D +T+ MALELGP+ IRVN+V PTVVMT MG+  WS+P K
Sbjct:   137 QASQRAIANHSVYCSTKGAMDMLTKVMALELGPHKIRVNTVNPTVVMTPMGQANWSNPQK 196

Query:   203 AGPMLAKTPLGRFA 216
             A  ML + PLG+FA
Sbjct:   197 AKTMLDRIPLGKFA 210

GO:0051289 "protein homotetramerization" evidence=IEA

GO:0050038 "L-xylulose reductase (NADP+) activity" evidence=IEA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=IEA

GO:0006739 "NADP metabolic process" evidence=IEA

GO:0006006 "glucose metabolic process" evidence=IEA

GO:0005997 "xylulose metabolic process" evidence=IEA

GO:0005903 "brush border" evidence=IEA

GO:0005902 "microvillus" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|J3KS22 DCXR "L-xylulose reductase" [Homo sapiens (taxid:9606)]

 Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 98/194 (50%), Positives = 136/194 (70%)

Query:    23 GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
             G GR  V+ L    A ++A+S+TQA+LDSL +  P ++ V VDL DW  T  A+  VGPV
Sbjct:    16 GKGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPV 75

Query:    83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
             D+L+NNAAVA    FL++ +E   D  F+VN++AVI +SQ+V++ +I   + G+IVNVSS
Sbjct:    76 DLLVNNAAVALLQPFLEVTKE-AFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS 134

Query:   143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
                + A+  H++Y ++K ALD +T+ MALELGP+ IRVN+V PTVVMT MG+  WSDP K
Sbjct:   135 QCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK 194

Query:   203 AGPMLAKTPLGRFA 216
             A  ML + PLG+FA
Sbjct:   195 AKTMLNRIPLGKFA 208

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3703	0.8361	0.8089	yes	N/A
Q8WNV7	DHRS4_PIG	1, ., 1, ., 1, ., 1, 8, 4	0.3333	0.7478	0.6379	yes	N/A
P0A0H9	FABG_STAAM	1, ., 1, ., 1, ., 1, 0, 0	0.3168	0.7941	0.7682	yes	N/A
Q5HPW0	FABG_STAEQ	1, ., 1, ., 1, ., 1, 0, 0	0.3088	0.7941	0.7745	yes	N/A
Q8JIS3	DER_CHICK	1, ., 1, ., 1, ., 1, 0	0.4793	0.8109	0.7845	yes	N/A
Q5HGK2	FABG_STAAC	1, ., 1, ., 1, ., 1, 0, 0	0.3168	0.7941	0.7682	yes	N/A
P99093	FABG_STAAN	1, ., 1, ., 1, ., 1, 0, 0	0.3168	0.7941	0.7682	yes	N/A
Q7Z4W1	DCXR_HUMAN	1, ., 1, ., 1, ., 1, 0	0.5103	0.8109	0.7909	yes	N/A
P0A2D1	UCPA_SALTY	1, ., -, ., -, ., -	0.3409	0.8571	0.7756	yes	N/A
Q8CPI3	FABG_STAES	1, ., 1, ., 1, ., 1, 0, 0	0.3088	0.7941	0.7745	yes	N/A
Q49117	Y182_METEA	1, ., -, ., -, ., -	0.3316	0.7899	0.7580	yes	N/A
Q9GKX2	DHRS4_RABIT	1, ., 1, ., 1, ., 1, 8, 4	0.3219	0.7899	0.7230	yes	N/A
Q21929	DCXR_CAEEL	1, ., 1, ., 1, ., 1, 0	0.4321	0.8109	0.7689	yes	N/A
Q6GHK4	FABG_STAAR	1, ., 1, ., 1, ., 1, 0, 0	0.3168	0.7941	0.7682	yes	N/A
P0A0I0	FABG_STAAW	1, ., 1, ., 1, ., 1, 0, 0	0.3168	0.7941	0.7682	yes	N/A
Q920P0	DCXR_RAT	1, ., 1, ., 1, ., 1, 0	0.5309	0.8109	0.7909	yes	N/A
Q29529	CBR2_PIG	1, ., 1, ., 1, ., 1, 8, 4	0.4587	0.8109	0.7909	yes	N/A
Q6G9Y2	FABG_STAAS	1, ., 1, ., 1, ., 1, 0, 0	0.3168	0.7941	0.7682	yes	N/A
P50199	GNO_GLUOX	1, ., 1, ., 1, ., 6, 9	0.2624	0.8697	0.8085	yes	N/A
Q91X52	DCXR_MOUSE	1, ., 1, ., 1, ., 1, 0	0.5412	0.8109	0.7909	yes	N/A
Q1JP75	DCXR_BOVIN	1, ., 1, ., 1, ., 1, 0	0.5309	0.8109	0.7909	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.921
3rd Layer	1.3.1.28	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	238
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	5e-85
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-61
cd05233	234	cd05233, SDR_c, classical (c) SDRs	5e-53
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	3e-41
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-41
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-40
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	4e-40
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-39
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-38
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-38
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	4e-37
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	2e-35
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	5e-35
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-34
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-34
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	4e-32
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	5e-32
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-31
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	2e-31
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-31
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	5e-31
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	1e-30
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	2e-30
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	4e-30
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	9e-30
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-29
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	3e-29
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	5e-29
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	7e-29
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	7e-29
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	9e-29
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-28
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	3e-28
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	3e-28
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	7e-28
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	9e-28
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	2e-27
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	6e-27
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	9e-27
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	1e-26
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-26
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	2e-26
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	3e-26
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	4e-26
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	7e-26
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	8e-26
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-25
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	3e-25
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	4e-25
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	4e-25
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	5e-25
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	5e-25
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	6e-25
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	7e-25
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	8e-25
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-24
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	1e-24
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-24
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	1e-24
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-24
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	2e-24
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	2e-24
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-24
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	3e-24
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	3e-24
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	4e-24
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	7e-24
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	5e-23
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	6e-23
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	9e-23
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	1e-22
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-22
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	2e-22
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	3e-22
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	3e-22
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	3e-22
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-22
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-21
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	2e-21
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-21
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	3e-21
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	4e-21
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	4e-21
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-21
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	5e-21
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	8e-21
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	1e-20
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-20
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-20
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	2e-20
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	3e-20
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	4e-20
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	6e-20
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	8e-20
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	8e-20
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-19
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	3e-19
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	3e-19
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	4e-19
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	4e-19
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	7e-19
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	7e-19
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	7e-19
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	8e-19
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	9e-19
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-18
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	1e-18
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	1e-18
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-18
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-18
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-18
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	3e-18
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	3e-18
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	3e-18
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	4e-18
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	7e-18
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	8e-18
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	9e-18
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	9e-18
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-17
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-17
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	1e-17
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-17
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	1e-17
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	2e-17
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-17
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-17
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	3e-17
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	4e-17
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	5e-17
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	5e-17
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	5e-17
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	6e-17
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	8e-17
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	1e-16
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	2e-16
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	2e-16
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	2e-16
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-16
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-16
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	2e-16
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-16
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	3e-16
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	5e-16
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-15
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	1e-15
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	2e-15
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-15
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	2e-15
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	2e-15
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	3e-15
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	3e-15
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	3e-15
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	4e-15
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	5e-15
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	5e-15
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	6e-15
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	7e-15
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	8e-15
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	8e-15
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	1e-14
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	1e-14
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-14
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	2e-14
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	2e-14
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	3e-14
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	3e-14
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	3e-14
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	3e-14
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-14
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	3e-14
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	5e-14
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	5e-14
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	6e-14
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	6e-14
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	6e-14
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	1e-13
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	1e-13
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	1e-13
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	1e-13
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-13
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	2e-13
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	3e-13
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	3e-13
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	5e-13
PRK07578	199	PRK07578, PRK07578, short chain dehydrogenase; Pro	9e-13
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	1e-12
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-12
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-12
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-12
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	2e-12
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	3e-12
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	3e-12
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	4e-12
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	6e-12
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	1e-11
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	1e-11
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	2e-11
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	6e-11
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	9e-11
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-10
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-10
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-10
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	4e-10
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	2e-09
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	2e-09
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	3e-09
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	3e-09
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	3e-09
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	5e-09
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	5e-09
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	6e-09
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	6e-09
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	2e-08
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	4e-08
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	7e-08
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-07
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	3e-07
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	3e-07
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	3e-07
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	4e-07
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	5e-07
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-07
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	7e-07
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	9e-07
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	1e-06
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	1e-06
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	1e-06
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	2e-06
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	2e-06
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	4e-06
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	4e-06
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	5e-06
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	7e-06
PRK08862	227	PRK08862, PRK08862, short chain dehydrogenase; Pro	8e-06
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	9e-06
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	9e-06
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	1e-05
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	1e-05
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	4e-05
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	5e-05
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	6e-05
PRK05599	246	PRK05599, PRK05599, hypothetical protein; Provisio	6e-05
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	8e-05
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	3e-04
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	4e-04
pfam08659	181	pfam08659, KR, KR domain	4e-04
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	4e-04
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	5e-04
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	7e-04
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	8e-04
PRK07904	253	PRK07904, PRK07904, short chain dehydrogenase; Pro	0.001
PRK07889	256	PRK07889, PRK07889, enoyl-(acyl carrier protein) r	0.001
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	0.003
pfam03435	380	pfam03435, Saccharop_dh, Saccharopine dehydrogenas	0.003

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  252 bits (645), Expect = 5e-85
 Identities = 108/194 (55%), Positives = 142/194 (73%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V+ L++  A ++A+S+TQA+LDSL +  P ++ V VDL DW  T  A+  VGPV
Sbjct: 18  GIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGIEPVCVDLSDWDATEEALGSVGPV 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAAVA    FL++ +E   D  FDVN++AVI++SQ+V++ MI   + GSIVNVSS
Sbjct: 78  DLLVNNAAVAILQPFLEVTKEA-FDRSFDVNVRAVIHVSQIVARGMIARGVPGSIVNVSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A + AL  HT+Y ++KAALD +T+ MALELGP+ IRVNSV PTVVMT MGR  WSDP K
Sbjct: 137 QASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIRVNSVNPTVVMTDMGRDNWSDPEK 196

Query: 203 AGPMLAKTPLGRFA 216
           A  ML + PLG+FA
Sbjct: 197 AKKMLNRIPLGKFA 210

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  193 bits (491), Expect = 2e-61
 Identities = 86/194 (44%), Positives = 115/194 (59%), Gaps = 2/194 (1%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR     L+Q  A ++A ++  A LD L       + +++D+ D A  RAA++  G  
Sbjct: 20  GIGRACAVALAQRGARVVAAARNAAALDRLAGET-GCEPLRLDVGDDAAIRAALAAAGAF 78

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D L+N A +A  +  LD+  E   D +  VN +    +++ V++ MI     GSIVNVSS
Sbjct: 79  DGLVNCAGIASLESALDMTAEGF-DRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSS 137

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            A    L  H  Y ASKAALD+ITR + +ELGP+ IRVNSV PTV +T M    WSDP K
Sbjct: 138 QAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQK 197

Query: 203 AGPMLAKTPLGRFA 216
           +GPMLA  PLGRFA
Sbjct: 198 SGPMLAAIPLGRFA 211

Length = 245

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  170 bits (433), Expect = 5e-53
 Identities = 71/201 (35%), Positives = 106/201 (52%), Gaps = 10/201 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL---KQAFPNVQTVQVDLQDWARTRAAVSKV 79
           GIGR I  +L++  A ++   + +  L  L   +    N   VQ D+ D     A V + 
Sbjct: 9   GIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEEDVEALVEEA 68

Query: 80  ----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
               G +D+L+NNA +AR     ++ +E+  D + DVN+  V  +++     M      G
Sbjct: 69  LEEFGRLDILVNNAGIARPGPLEELTDED-WDRVLDVNLTGVFLLTRAALPHMKKQG-GG 126

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT 195
            IVN+SS+AG   L G   Y+ASKAAL+ +TR++ALEL PY IRVN+V P +V T M   
Sbjct: 127 RIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGLVDTPMLAK 186

Query: 196 GWSDPAKAGPMLAKTPLGRFA 216
              + A+   + A  PLGR  
Sbjct: 187 LGPEEAE-KELAAAIPLGRLG 206

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  140 bits (356), Expect = 3e-41
 Identities = 70/204 (34%), Positives = 100/204 (49%), Gaps = 14/204 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIAL----SKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIGR I  +L+   A +I +        A  + ++ A    +  QVD++D A  +AAV+ 
Sbjct: 17  GIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAA 76

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                G +D+L+ NA +     F ++D+E   + + DVN+     ++Q     +I     
Sbjct: 77  GVEDFGRLDILVANAGIFPLTPFAEMDDEQW-ERVIDVNLTGTFLLTQAALPALIR-AGG 134

Query: 135 GSIVNVSSIAG-KTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM- 192
           G IV  SS+AG +    G   Y+ASKA L   TR +ALEL   NI VNSV P  V T M 
Sbjct: 135 GRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMA 194

Query: 193 GRTGWSDPAKAGPMLAKTPLGRFA 216
           G  G  D   A  + A  PLGR  
Sbjct: 195 GNLG--DAQWAEAIAAAIPLGRLG 216

Length = 251

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  140 bits (356), Expect = 4e-41
 Identities = 66/201 (32%), Positives = 99/201 (49%), Gaps = 12/201 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIA----LSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIGR I  +L+   A ++         +A    L+ A    + +  D+ D A  RA +  
Sbjct: 16  GIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEA 75

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                G +D+L+NNA + R      + EE+  D + DVN+    N+ +     MI  +  
Sbjct: 76  AVEAFGALDILVNNAGITRDALLPRMSEED-WDRVIDVNLTGTFNVVRAALPPMIKAR-Y 133

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G IVN+SS++G T   G T YSA+KA +   T+ +ALEL    I VN+V P  + T M  
Sbjct: 134 GRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE 193

Query: 195 TGWSDPAKAGPMLAKTPLGRF 215
            G  +  KA  +L + PLGR 
Sbjct: 194 -GLPEEVKAE-ILKEIPLGRL 212

Length = 246

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  139 bits (353), Expect = 1e-40
 Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 13/202 (6%)

Query: 23  GIGRCIVEKLSQHEAIII-----ALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIGR I E+L+   A ++     + +  +A +  +         VQ D+ D      AV 
Sbjct: 16  GIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVD 75

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +     G VD+L+NNA + R +  + + EE+  D + D N+  V N+++ V++ M+  + 
Sbjct: 76  EAKAEFGGVDILVNNAGITRDNLLMRMKEEDW-DRVIDTNLTGVFNLTKAVARPMMK-QR 133

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N+SS+ G     G   Y+ASKA +   T+++A EL    I VN+V P  + T M 
Sbjct: 134 SGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMT 193

Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
                +  K   +LA+ PLGR 
Sbjct: 194 DAL-PEDVKEA-ILAQIPLGRL 213

Length = 248

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  138 bits (349), Expect = 4e-40
 Identities = 72/199 (36%), Positives = 106/199 (53%), Gaps = 8/199 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV-- 79
           GIG  I E  +   A +  L +++   +   Q    N + +  D+ D     AAV+ V  
Sbjct: 26  GIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVIS 85

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G +D+L+N+A VA      D+ EE+  D   D+N+K    ++Q V + MI     G I
Sbjct: 86  AFGRIDILVNSAGVALLAPAEDVSEEDW-DKTIDINLKGSFLMAQAVGRHMIAAG-GGKI 143

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           VN++S AG  ALE H  Y ASKA +  +T+ +ALE GPY I VN++ PTVV+T++G+  W
Sbjct: 144 VNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAW 203

Query: 198 SDPAKAGPMLAKTPLGRFA 216
           +   K        P GRFA
Sbjct: 204 AGE-KGERAKKLIPAGRFA 221

Length = 255

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  136 bits (345), Expect = 1e-39
 Identities = 64/207 (30%), Positives = 95/207 (45%), Gaps = 17/207 (8%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFP-----NVQTVQVDL-QDWARTRA 74
           GIGR I   L++  A  ++ A    +   ++L  A           V  D+  D     A
Sbjct: 16  GIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEA 75

Query: 75  AVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
            V+      G +D+L+NNA +A  D  L+   E   D + DVN+     +++      + 
Sbjct: 76  LVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAA----LP 131

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
              +  IVN+SS+AG     G   Y+ASKAAL  +T+ +ALEL P  IRVN+V P  + T
Sbjct: 132 LMKKQRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDT 191

Query: 191 QMGRTGWSDP-AKAGPMLAKTPLGRFA 216
            M     S        + A+ PLGR  
Sbjct: 192 PMTAALESAELEALKRLAARIPLGRLG 218

Length = 251

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  133 bits (338), Expect = 1e-38
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 13/203 (6%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVS 77
           G+GR I  +L++  A +++     +   + L +A        Q VQ D+ D A   AAV+
Sbjct: 17  GLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVA 76

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                 G +D+L+NNA +       D+ ++   D + DVN+  V ++ + V   M   + 
Sbjct: 77  AAVERFGRIDILVNNAGIFEDKPLADMSDD-EWDEVIDVNLSGVFHLLRAVVPPMR-KQR 134

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN+SS+AG     G + Y+A+KA L  +T+ +A EL  Y I VN V P  + T M 
Sbjct: 135 GGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMK 194

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
                +  +A    A+TPLGR  
Sbjct: 195 EATIEEAREA--KDAETPLGRSG 215

Length = 249

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  132 bits (334), Expect = 7e-38
 Identities = 67/203 (33%), Positives = 95/203 (46%), Gaps = 12/203 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD---SLKQAFPNVQTVQVDL---QDWART-RAA 75
           GIG  I  + +   A ++   + +   +   +   A      V  D+    D      AA
Sbjct: 16  GIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAA 75

Query: 76  VSKVGPVDVLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           + + G VD+L+NNA    R    LD+DE    D IF VN+K+    +Q     M      
Sbjct: 76  LERFGSVDILVNNAGTTHRNGPLLDVDEAEF-DRIFAVNVKSPYLWTQAAVPAMRGEG-G 133

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G+IVNV+S AG     G   Y+ASK A+ ++T+ +A ELGP  IRVN+V P VV T +  
Sbjct: 134 GAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLE 193

Query: 195 TGWSDPAKAG--PMLAKTPLGRF 215
               +P        LA  PLGR 
Sbjct: 194 AFMGEPTPENRAKFLATIPLGRL 216

Length = 251

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  129 bits (328), Expect = 4e-37
 Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 12/202 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIA----LSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIGR I  +L+   A +             ++ +K    N   ++ D+ D     A V K
Sbjct: 11  GIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSDREAVEALVEK 70

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           V    GPVD+L+NNA + R +  + + EE+  D++ +VN+  V N++Q V + MI  +  
Sbjct: 71  VEAEFGPVDILVNNAGITRDNLLMRMSEEDW-DAVINVNLTGVFNVTQAVIRAMIKRR-S 128

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G I+N+SS+ G     G   Y+ASKA +   T+++A EL    I VN+V P  + T M  
Sbjct: 129 GRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNAVAPGFIDTDMTD 188

Query: 195 TGWSDPAKAGPMLAKTPLGRFA 216
                  +   +L + PLGR  
Sbjct: 189 ALPEKVKEK--ILKQIPLGRLG 208

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  125 bits (316), Expect = 2e-35
 Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 8/174 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQ--TVQVDLQDWARTRAAVS--- 77
           GIG      L++  A ++  ++ +  L++L           + +D+ D A   AA+    
Sbjct: 17  GIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALP 76

Query: 78  -KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
            + G +D+L+NNA +A  D   + D ++  D + D N+K ++N ++ V   M++ K  G 
Sbjct: 77  EEFGRIDILVNNAGLALGDPLDEADLDD-WDRMIDTNVKGLLNGTRAVLPGMVERK-SGH 134

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
           I+N+ SIAG+    G  +Y A+KAA+ + +  +  EL    IRV  + P +V T
Sbjct: 135 IINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVET 188

Length = 246

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  124 bits (314), Expect = 5e-35
 Identities = 54/179 (30%), Positives = 91/179 (50%), Gaps = 7/179 (3%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV-- 79
           GIG  +   L+     +IA ++    L+SL +    N++ +++D+ D    +AAV +V  
Sbjct: 11  GIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLELDVTDEESIKAAVKEVIE 70

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G +DVL+NNA    F    +   E  +  +F+VN+   + +++     M      G I
Sbjct: 71  RFGRIDVLVNNAGYGLFGPLEETSIE-EVRELFEVNVFGPLRVTRAFLPLMRKQG-SGRI 128

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG 196
           VNVSS+AG         Y ASKAAL++++ ++ LEL P+ I+V  ++P  V T      
Sbjct: 129 VNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIEPGPVRTGFADNA 187

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  123 bits (310), Expect = 2e-34
 Identities = 67/203 (33%), Positives = 107/203 (52%), Gaps = 13/203 (6%)

Query: 23  GIGRCIVEKLSQHEAIII-----ALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIGR I  KL++  A +I     +    +  ++ LK        V  D+ D    +A V 
Sbjct: 9   GIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVE 68

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           ++    GP+D+L+NNA + R +  + + EE+  D++ D N+  V N++Q V + MI  + 
Sbjct: 69  EIEEELGPIDILVNNAGITRDNLLMRMKEEDW-DAVIDTNLTGVFNLTQAVLRIMIKQR- 126

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N+SS+ G     G   Y+ASKA +   T+++A EL   NI VN+V P  + T M 
Sbjct: 127 SGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMT 186

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
               S+  K   +L++ PLGRF 
Sbjct: 187 DK-LSEKVKKK-ILSQIPLGRFG 207

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  122 bits (308), Expect = 4e-34
 Identities = 68/204 (33%), Positives = 107/204 (52%), Gaps = 15/204 (7%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSK----TQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIGR I E L++  A ++IA        Q  L+ +K+   +   V+ D+         V 
Sbjct: 16  GIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVE 75

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           ++    G +D+L+NNA ++ F    D+ +E   D + DVN+  V+ +++     MI  K 
Sbjct: 76  QIVEKFGKIDILVNNAGISNFGLVTDMTDE-EWDRVIDVNLTGVMLLTRYALPYMIKRK- 133

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN+SSI G        +YSASK A+++ T+ +A EL P  IRVN+V P  + T+M 
Sbjct: 134 SGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMW 193

Query: 194 RTGWSDPAKAGPMLAKT-PLGRFA 216
            + +S+  K    LA+  PLGR  
Sbjct: 194 SS-FSEEDK--EGLAEEIPLGRLG 214

Length = 247

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  117 bits (295), Expect = 4e-32
 Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 10/200 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVSK 78
           GIG  I   L++  A I+  S+ +   +  +Q              D+ D    +AAV  
Sbjct: 16  GIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCDVSDEEAIKAAVEA 75

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           +    G +D+L+NNA + R     +  E    D I DVN+  V  +SQ V++ MI     
Sbjct: 76  IEEDFGKIDILVNNAGIIRRHPAEEFPEAEWRDVI-DVNLNGVFFVSQAVARHMIKQG-H 133

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G I+N+ S+  +        Y+ASK  +  +T+ +A E   + I+VN++ P    T+M  
Sbjct: 134 GKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVNAIAPGYFATEMTE 193

Query: 195 TGWSDPAKAGPMLAKTPLGR 214
              +DP     +L + P GR
Sbjct: 194 AVVADPEFNDDILKRIPAGR 213

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  116 bits (294), Expect = 5e-32
 Identities = 67/210 (31%), Positives = 98/210 (46%), Gaps = 18/210 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN----VQTVQVDLQDWARTRAAVSK 78
           GIG  +   L++  A + A+ +    L  L            T ++D+ D A     V +
Sbjct: 9   GIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSAAVDEVVQR 68

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           +    GP+DVL+N A + R      + +E+   + F VN   V N+SQ VS  M   +  
Sbjct: 69  LEREYGPIDVLVNVAGILRLGAIDSLSDED-WQATFAVNTFGVFNVSQAVSPRMKRRR-S 126

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G+IV V S A      G   Y+ASKAAL  +T+ + LEL PY IR N V P    T+M R
Sbjct: 127 GAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSPGSTDTEMQR 186

Query: 195 TGWSDPAKAGPMLAKT--------PLGRFA 216
             W+D      ++A +        PLG+ A
Sbjct: 187 QLWNDEYGEQQVIAGSPEQFRLGIPLGKIA 216

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  116 bits (292), Expect = 1e-31
 Identities = 72/208 (34%), Positives = 105/208 (50%), Gaps = 16/208 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALS---KTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS-- 77
           GIG  I    ++H A +I L    + +   D L         V  D++D A   AA+   
Sbjct: 17  GIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRA 76

Query: 78  --KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
             K G +D+L+NNA V R   FLD+ +E+  D   D+NIK V N+++ V   MI  K  G
Sbjct: 77  KEKEGRIDILVNNAGVCRLGSFLDMSDEDR-DFHIDINIKGVWNVTKAVLPEMIARK-DG 134

Query: 136 SIVNVSSIAGK-TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG- 193
            IV +SS+ G   A  G T Y+ +KAA+  +T+++A+E     IRVN++ P  V T M  
Sbjct: 135 RIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAE 194

Query: 194 ----RTGWSDPAKAGPMLAK-TPLGRFA 216
               ++   DP      +AK  PL R A
Sbjct: 195 SIARQSNPEDPESVLTEMAKAIPLRRLA 222

Length = 263

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  116 bits (292), Expect = 2e-31
 Identities = 47/191 (24%), Positives = 92/191 (48%), Gaps = 16/191 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN-----VQTVQVDL---QDWARTRA 74
           GIG  + ++L++    +I +++ +  L++L +   +     V+ +  DL   +   R   
Sbjct: 17  GIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLED 76

Query: 75  AV-SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            +  + GP+DVL+NNA    F  FL++  +   + +  +NI A+  +++ V   M++   
Sbjct: 77  ELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEE-MIQLNILALTRLTKAVLPGMVERG- 134

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N+ S AG        +YSA+KA + S +  +  EL    ++V +V P        
Sbjct: 135 AGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPT----- 189

Query: 194 RTGWSDPAKAG 204
           RT + D   + 
Sbjct: 190 RTEFFDAKGSD 200

Length = 265

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  114 bits (287), Expect = 5e-31
 Identities = 62/180 (34%), Positives = 105/180 (58%), Gaps = 14/180 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQA-----NLDSLKQAFPNVQTVQVDL--QDWART--R 73
           GIGR I  +L++  ++++  +K +A      L  +K+       V  D+  ++   T  +
Sbjct: 17  GIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAK 76

Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           A + + G  D+L+NNA +  F  FL++D++ LID     + K+VI  SQ ++K M +   
Sbjct: 77  ATIDRYGVADILVNNAGLGLFSPFLNVDDK-LIDKHISTDFKSVIYCSQELAKEMRE--- 132

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G+IVN++S+AG     G +IY A KAA+ ++T+ +ALEL P  IRVN++ P  V T++G
Sbjct: 133 GGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLG 191

Length = 252

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  114 bits (287), Expect = 5e-31
 Identities = 65/208 (31%), Positives = 97/208 (46%), Gaps = 20/208 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAA 75
           GIG       ++  A +    +    L+  +Q+          +  V  DL +       
Sbjct: 14  GIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVADLTEEEGQDRI 73

Query: 76  VSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
           +S      G +D+L+NNA +       D D E   D + ++N++AVI ++++    +I  
Sbjct: 74  ISTTLAKFGRLDILVNNAGILAKGGGEDQDIE-EYDKVMNLNLRAVIYLTKLAVPHLIKT 132

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
           K  G IVNVSS+AG  +  G   Y  SKAALD  TR  ALEL P  +RVNSV P V++T 
Sbjct: 133 K--GEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGVRVNSVSPGVIVTG 190

Query: 192 -MGRTGWSDPAKAGPMLAKT----PLGR 214
              R G  +       L++     PLGR
Sbjct: 191 FHRRMGMPEEQYIK-FLSRAKETHPLGR 217

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  113 bits (286), Expect = 1e-30
 Identities = 71/228 (31%), Positives = 106/228 (46%), Gaps = 44/228 (19%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG  IV++L  + A ++       +         N Q V  D+         V+++   
Sbjct: 20  GIGLAIVKELLANGANVVNADIHGGDGQ-----HENYQFVPTDVSSAEEVNHTVAEIIEK 74

Query: 80  -GPVDVLINNAAVARFDRFL----------DIDEENLIDSIFDVNIKAVINISQVVSKTM 128
            G +D L+NNA +    R L          +++E    D +F++N K V  +SQ V++ M
Sbjct: 75  FGRIDGLVNNAGI-NIPRLLVDEKDPAGKYELNEAAF-DKMFNINQKGVFLMSQAVARQM 132

Query: 129 IDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
           +     G IVN+SS AG    EG + Y+A+KAAL+S TR+ A ELG +NIRV  V P + 
Sbjct: 133 VKQH-DGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGI- 190

Query: 189 MTQMGRTGWSDPA----------------KAG-PMLAKTPLGRFAGKL 219
              +  TG   P                 +AG    +  PLGR +GKL
Sbjct: 191 ---LEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGR-SGKL 234

Length = 266

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  112 bits (283), Expect = 2e-30
 Identities = 66/201 (32%), Positives = 98/201 (48%), Gaps = 14/201 (6%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTR---- 73
           GIGR I ++L++  A ++   A SK  A   +  ++ A      VQ D+ D ++      
Sbjct: 14  GIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQADVSDPSQVARLFD 73

Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           AA    G VD+L+NNA V       +  EE   D +F VN K    + Q  +K +   + 
Sbjct: 74  AAEKAFGGVDILVNNAGVMLKKPIAETSEEEF-DRMFTVNTKGAFFVLQEAAKRL---RD 129

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N+SS         +  Y+ SKAA+++ TR +A ELG   I VN+V P  V T M 
Sbjct: 130 GGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGITVNAVAPGPVDTDMF 189

Query: 194 RTGWSDPAKAGPMLAKTPLGR 214
             G ++ A  G     +PLGR
Sbjct: 190 YAGKTEEAVEG-YAKMSPLGR 209

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score =  111 bits (281), Expect = 4e-30
 Identities = 52/178 (29%), Positives = 92/178 (51%), Gaps = 12/178 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANL----DSLKQAFPN-VQTVQVDLQDWARTRAAVS 77
           GIG     + ++  A +I   +    L    D L   FP  V  +Q+D+ D     AA+ 
Sbjct: 11  GIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVSDRESIEAALE 70

Query: 78  KV----GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            +      +D+L+NNA +A   D   + D E+  +++ D N+K ++N+++++   MI   
Sbjct: 71  NLPEEFRDIDILVNNAGLALGLDPAQEADLED-WETMIDTNVKGLLNVTRLILPIMIARN 129

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            QG I+N+ SIAG+    G  +Y A+KAA+   +  +  +L    IRV +++P +V T
Sbjct: 130 -QGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRVTNIEPGLVET 186

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  111 bits (279), Expect = 9e-30
 Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 11/183 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG  +     +  A +I   +     +          T  +D+ D A       ++   
Sbjct: 19  GIGYAVALAFVEAGAKVIGFDQAFLTQEDYP-----FATFVLDVSDAAAVAQVCQRLLAE 73

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            GP+DVL+N A + R      + +E+     F VN     N+ + V       +  G+IV
Sbjct: 74  TGPLDVLVNAAGILRMGATDSLSDED-WQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIV 131

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS 198
            V S A      G   Y ASKAAL S+ + + LEL PY +R N V P    T M RT W 
Sbjct: 132 TVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWV 191

Query: 199 DPA 201
           D  
Sbjct: 192 DED 194

Length = 252

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score =  109 bits (274), Expect = 2e-29
 Identities = 46/174 (26%), Positives = 87/174 (50%), Gaps = 6/174 (3%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAV----SK 78
           GIG  I   L++    +    +   +L +L  +  +V+ V  D +D    RA V     +
Sbjct: 11  GIGIEIARALARDGYRVSLGLRNPEDLAALSASGGDVEAVPYDARDPEDARALVDALRDR 70

Query: 79  VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            G +DVL++NA + R     +  +   +++ F +N+ A   +++ +   + +    G +V
Sbjct: 71  FGRIDVLVHNAGIGRPTTLREGSDA-ELEAHFSINVIAPAELTRALLPALRE-AGSGRVV 128

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            ++S++GK  L G+  YSASK AL ++   +  E   + +RV++V P  V T M
Sbjct: 129 FLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCPGFVDTPM 182

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  109 bits (274), Expect = 3e-29
 Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 8/199 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR I    ++  A +IA    +  L  L +  P + T  +D+ D  +  A   + G +
Sbjct: 13  GIGRAIALAFAREGANVIATDINEEKLKEL-ERGPGITTRVLDVTDKEQVAALAKEEGRI 71

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           DVL N A        LD ++++  D   ++N++++  + + V   M+  K  GSI+N+SS
Sbjct: 72  DVLFNCAGFVHHGSILDCEDDDW-DFAMNLNVRSMYLMIKAVLPKMLARK-DGSIINMSS 129

Query: 143 IAGK-TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT---GWS 198
           +A     +    +YS +KAA+  +T+++A +     IR N++ P  V T           
Sbjct: 130 VASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAICPGTVDTPSLEERIQAQP 189

Query: 199 DPAKA-GPMLAKTPLGRFA 216
           DP +A     A+ PLGR A
Sbjct: 190 DPEEALKAFAARQPLGRLA 208

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  109 bits (273), Expect = 5e-29
 Identities = 65/204 (31%), Positives = 102/204 (50%), Gaps = 17/204 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALS----KTQANLDSLKQAFP----NVQTVQVDLQDWARTRA 74
           G+GR I  +L+   A +I L     + +A  D++             +  D++D+A TRA
Sbjct: 17  GLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRA 76

Query: 75  AVS----KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
           A+     + G +D+L+NNA +A    F ++  E   D + DVN+    N++Q     MI 
Sbjct: 77  ALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEW-DDVIDVNLDGFFNVTQAALPPMIR 135

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            +  G IVN++S+AG     G   Y+ASKA L  +T+T+A EL P  I VN+V P  + T
Sbjct: 136 ARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINT 195

Query: 191 QMGRTGWSDPAKAGPMLAKTPLGR 214
            M      + A    +L   P+ R
Sbjct: 196 PMAD----NAAPTEHLLNPVPVQR 215

Length = 249

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  108 bits (273), Expect = 7e-29
 Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 17/208 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP--NVQTVQVDLQDWARTRA----AV 76
           GIGR I E  ++  A +     ++A L +     P   V     D+ D A+       AV
Sbjct: 22  GIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAV 81

Query: 77  SKVGPVDVLINNAAVARFD-RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
            + G +DVL+NNA +A       +I  E   +    VN+      ++     +      G
Sbjct: 82  ERFGGLDVLVNNAGIAGPTGGIDEITPEQ-WEQTLAVNLNGQFYFARAAVPLLKASGHGG 140

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT 195
            I+ +SS+AG+    G T Y+ASK A+  + +++A+ELGP  IRVN++ P +V     R 
Sbjct: 141 VIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRR 200

Query: 196 GWSDPAK-----AGPM----LAKTPLGR 214
                A+        M    L K  LGR
Sbjct: 201 VIEARAQQLGIGLDEMEQEYLEKISLGR 228

Length = 264

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  108 bits (272), Expect = 7e-29
 Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 11/203 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVSK 78
           GIG  IVE+L+   A +   ++ Q  LD     +      V+    D+   +  +  +  
Sbjct: 17  GIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVCDVSSRSERQELMDT 76

Query: 79  V-----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           V     G +++L+NNA         D  EE+    I   N +A  ++S++    +     
Sbjct: 77  VASHFGGKLNILVNNAGTNIRKEAKDYTEEDY-SLIMSTNFEAAYHLSRLAHPLLKASG- 134

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G+IV +SS+AG  A+     Y A+K AL+ +TR++A E    NIRVN+V P V+ T + 
Sbjct: 135 NGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIRVNAVAPWVIATPLV 194

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
                       ++ +TPL RF 
Sbjct: 195 EPVIQQKENLDKVIERTPLKRFG 217

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  108 bits (271), Expect = 9e-29
 Identities = 69/206 (33%), Positives = 92/206 (44%), Gaps = 17/206 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK---- 78
           GIGR +   L Q  A +IAL      L          +   +D+ D A  R   S+    
Sbjct: 9   GIGRAVARHLLQAGATVIALDLPFVLLLEYGDPL---RLTPLDVADAAAVREVCSRLLAE 65

Query: 79  VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            GP+D L+N A V R     D       +  F VN+  V N+ Q V+  M D +  G+IV
Sbjct: 66  HGPIDALVNCAGVLRPGAT-DPLSTEDWEQTFAVNVTGVFNLLQAVAPHMKDRR-TGAIV 123

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS 198
            V+S A          Y ASKAAL S+++ + LEL PY +R N V P    T M RT W 
Sbjct: 124 TVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSPGSTDTAMQRTLWH 183

Query: 199 DPAKAGPMLAKT--------PLGRFA 216
           D   A  ++A          PLG+ A
Sbjct: 184 DEDGAAQVIAGVPEQFRLGIPLGKIA 209

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  107 bits (269), Expect = 1e-28
 Identities = 54/178 (30%), Positives = 97/178 (54%), Gaps = 10/178 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIGR +   L++    +  L++T+ NL +    ++     V     D+ D+    AA+ +
Sbjct: 18  GIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQ 77

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           +    G +D+LINNA +++F +FL++D     + I  VN+  V   ++ V  +MI+ +  
Sbjct: 78  LKNELGSIDILINNAGISKFGKFLELDPAEW-EKIIQVNLMGVYYATRAVLPSMIERQ-S 135

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           G I+N+SS AG+      + YSASK  +  +T ++  E+  +NIRV ++ P+ V T M
Sbjct: 136 GDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDM 193

Length = 239

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  107 bits (268), Expect = 3e-28
 Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 10/202 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIA-----LSKTQANLDSLKQAFPNVQTVQVDLQDWARTRA--- 74
           GIG+ I  +L+   A ++          +  ++ +K        VQ D+       A   
Sbjct: 14  GIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQADVSKEEDVVALFQ 73

Query: 75  -AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            A+ + G +D+L+NNA +       ++  E+  + + DVN+      ++   K     KI
Sbjct: 74  SAIKEFGTLDILVNNAGLQGDASSHEMTLEDW-NKVIDVNLTGQFLCAREAIKRFRKSKI 132

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           +G I+N+SS+  K    GH  Y+ASK  +  +T+T+A E  P  IRVN++ P  + T + 
Sbjct: 133 KGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIRVNAIAPGAINTPIN 192

Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
              W DP +   +L+  P+GR 
Sbjct: 193 AEAWDDPEQRADLLSLIPMGRI 214

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  106 bits (268), Expect = 3e-28
 Identities = 55/210 (26%), Positives = 87/210 (41%), Gaps = 25/210 (11%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ----AFPNVQTVQVDLQDW---ARTRAA 75
           GIGR +  + ++  A ++ L   +   +        A   V   + D+            
Sbjct: 10  GIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKREEVYEAAKK 69

Query: 76  VSK-VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           + K VG V +LINNA V    + L++ +E  I+  F+VN  A    ++     M++    
Sbjct: 70  IKKEVGDVTILINNAGVVSGKKLLELPDEE-IEKTFEVNTLAHFWTTKAFLPDMLERN-H 127

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPY---NIRVNSVQPTVVMTQ 191
           G IV ++S+AG  +  G   Y ASKAA      ++ LEL  Y    I+   V P  + T 
Sbjct: 128 GHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTLVCPYFINTG 187

Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFAGKLKP 221
           M +              KTP    A  L+P
Sbjct: 188 MFQG------------VKTPRPLLAPILEP 205

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  106 bits (266), Expect = 7e-28
 Identities = 58/206 (28%), Positives = 100/206 (48%), Gaps = 17/206 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPN-VQTVQVDLQDWARTRAAVS 77
           GIG+ I +  ++  A +    +    L++    +  A       +Q D++D     AAV 
Sbjct: 14  GIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQCDVRDPEAVEAAVD 73

Query: 78  KV----GPVDVLINNAA---VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
           +     G +D+LINNAA   +A  +        N   ++ D+++    N ++ V K +I+
Sbjct: 74  ETLKEFGKIDILINNAAGNFLAPAESL----SPNGFKTVIDIDLNGTFNTTKAVGKRLIE 129

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            K  GSI+N+S+    T        +A+KA +D++TR++A+E GPY IRVN++ P  + T
Sbjct: 130 AKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWGPYGIRVNAIAPGPIPT 189

Query: 191 QMG-RTGWSDPAKAGPMLAKTPLGRF 215
             G             M+ + PLGR 
Sbjct: 190 TEGMERLAPSGKSEKKMIERVPLGRL 215

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score =  105 bits (264), Expect = 9e-28
 Identities = 57/175 (32%), Positives = 93/175 (53%), Gaps = 13/175 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG  +  +L+     +I ++++  +       FP  +    DL D  +T A ++++   
Sbjct: 14  GIGLALSLRLANLGHQVIGIARSAID------DFPG-ELFACDLADIEQTAATLAQINEI 66

Query: 80  GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVN 139
            PVD ++NN  +A       ID   L   ++D+N++A + ++Q   + M   + QG IVN
Sbjct: 67  HPVDAIVNNVGIALPQPLGKIDLAAL-QDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVN 124

Query: 140 VSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           + S A   AL+  T YSA+K+AL   TRT ALEL  Y I VN+V P  + T++ R
Sbjct: 125 ICSRAIFGALD-RTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFR 178

Length = 234

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  105 bits (263), Expect = 2e-27
 Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 19/211 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG  I   L++  A +   ++ + NL+     L+     V  V  DL D       V K
Sbjct: 12  GIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLTDPEDIDRLVEK 71

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                G VD+L+NNA       F ++ +E      FD+ + +VI I + V   M + +  
Sbjct: 72  AGDAFGRVDILVNNAGGPPPGPFAELTDE-DWLEAFDLKLLSVIRIVRAVLPGMKE-RGW 129

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ--- 191
           G IVN+SS+  K       + + ++A L  + +T++ EL P  + VNSV P  + T+   
Sbjct: 130 GRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSVLPGYIDTERVR 189

Query: 192 ------MGRTGWSDPAKAGPMLAKTPLGRFA 216
                   + G S       + ++ PLGR  
Sbjct: 190 RLLEARAEKEGISVEEAEKEVASQIPLGRVG 220

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  103 bits (260), Expect = 6e-27
 Identities = 57/177 (32%), Positives = 90/177 (50%), Gaps = 10/177 (5%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-- 79
           GIG  + E+     A ++IA  K      +  +  P    V +D+         V+    
Sbjct: 17  GIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVE 76

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G +D+L NNAA+      LDI  ++  D +F VN+K +  + Q V++ M++    G I
Sbjct: 77  RFGGIDILFNNAALFDMAPILDISRDSY-DRLFAVNVKGLFFLMQAVARHMVEQGRGGKI 135

Query: 138 VNVSSIAGK--TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           +N++S AG+   AL  H  Y A+KAA+ S T++ AL L  + I VN++ P VV T M
Sbjct: 136 INMASQAGRRGEALVSH--YCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPM 190

Length = 257

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  103 bits (258), Expect = 9e-27
 Identities = 70/204 (34%), Positives = 102/204 (50%), Gaps = 17/204 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDL----------QDWART 72
           GIG  I  +L+Q  A ++  S+ Q N+D   +A   +Q   + +          +D  R 
Sbjct: 21  GIGLAIARRLAQDGAHVVVSSRKQQNVD---RAVATLQGEGLSVTGTVCHVGKAEDRERL 77

Query: 73  RA-AVSKVGPVDVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
            A AV+  G VD+L++NAAV  F    LD  EE + D I DVN+KA   +++ V   M +
Sbjct: 78  VATAVNLHGGVDILVSNAAVNPFFGNILDSTEE-VWDKILDVNVKATALMTKAVVPEM-E 135

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            +  GS+V VSS+A      G   Y+ SK AL  +T+ +A EL P NIRVN + P ++ T
Sbjct: 136 KRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPRNIRVNCLAPGLIKT 195

Query: 191 QMGRTGWSDPAKAGPMLAKTPLGR 214
                 W D A    M     + R
Sbjct: 196 SFSSALWMDKAVEESMKETLRIRR 219

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  102 bits (257), Expect = 1e-26
 Identities = 63/184 (34%), Positives = 88/184 (47%), Gaps = 20/184 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQT----------VQVDLQDWART 72
           GIGR I E+L+  +   I L    A+L+  + A   +Q           V  D+ D    
Sbjct: 13  GIGRAIAERLAA-DGFNIVL----ADLNLEEAAKSTIQEISEAGYNAVAVGADVTDKDDV 67

Query: 73  RA----AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTM 128
            A    AV K G  DV++NNA +A     L I EE+L   ++ VN+  V+   Q  ++  
Sbjct: 68  EALIDQAVEKFGSFDVMVNNAGIAPITPLLTITEEDL-KKVYAVNVFGVLFGIQAAARQF 126

Query: 129 IDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
                 G I+N SSIAG         YSASK A+  +T+T A EL P  I VN+  P +V
Sbjct: 127 KKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNAYAPGIV 186

Query: 189 MTQM 192
            T+M
Sbjct: 187 KTEM 190

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  101 bits (255), Expect = 2e-26
 Identities = 61/200 (30%), Positives = 92/200 (46%), Gaps = 16/200 (8%)

Query: 24  IGRCIVEKL-SQHEAIIIALSKTQANLDSLKQ----AFPNVQTVQVDLQDWAR----TRA 74
           IGR I E L ++   +++  ++++A    LK        +   VQ DL D+A       A
Sbjct: 12  IGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLSDFAACADLVAA 71

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           A    G  DVL+NNA+           E+     +F +N+KA   + Q  ++  +     
Sbjct: 72  AFRAFGRCDVLVNNASAFYPTPLGQGSEDAW-AELFGINLKAPYLLIQAFAR-RLAGSRN 129

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           GSI+N+        L G+  Y  SKAAL+ +TR+ ALEL P NIRVN + P +++     
Sbjct: 130 GSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAP-NIRVNGIAPGLILLPEDM 188

Query: 195 TGWSDPAKAGPMLAKTPLGR 214
                   A   L K PL R
Sbjct: 189 D-AEYRENA---LRKVPLKR 204

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 2e-26
 Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 21/210 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRA---- 74
           G+G  I E L +  A ++  ++    L+     L+    +   +  D+ D A        
Sbjct: 23  GLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEE 82

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
            + + G VD+L+NNA         D   E   D + ++N++ +  +SQ V+K  +  +  
Sbjct: 83  TLERFGHVDILVNNAGATWGAPAEDHPVEA-WDKVMNLNVRGLFLLSQAVAKRSMIPRGY 141

Query: 135 GSIVNVSSIAGKTALEGH------TI-YSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
           G I+NV+S+AG   L G+      TI Y+ SK A+ + TR +A E GP+ IRVN++ P  
Sbjct: 142 GRIINVASVAG---LGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGF 198

Query: 188 VMTQMGRTGWSDPAKAGPMLAKTPLGRFAG 217
             T+M  T  +       +LA TPLGR   
Sbjct: 199 FPTKM--TRGTLERLGEDLLAHTPLGRLGD 226

Length = 259

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score =  102 bits (255), Expect = 3e-26
 Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 10/201 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQAN----LDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG  +   L+++ A II    T       +  L+Q          ++       AA+  
Sbjct: 20  GIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEH 79

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           +    GP+DVLINNA + R   F +  E+   + +  VN  AV  +SQ V++ M+  +  
Sbjct: 80  IEKDIGPIDVLINNAGIQRRHPFTEFPEQEW-NDVIAVNQTAVFLVSQAVARYMVKRQ-A 137

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G I+N+ S+  +   +  T Y+ASK A+  +TR M +EL  +NI+VN + P    T+M +
Sbjct: 138 GKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTK 197

Query: 195 TGWSDPAKAGPMLAKTPLGRF 215
               D A    +  +TP  R+
Sbjct: 198 ALVEDEAFTAWLCKRTPAARW 218

Length = 254

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  101 bits (254), Expect = 4e-26
 Identities = 66/210 (31%), Positives = 97/210 (46%), Gaps = 27/210 (12%)

Query: 23  GIGRCIVEKLSQHEAIIIAL-------------SKTQANLDS----LKQAFPNVQTVQVD 65
           G GR    +L+   A IIA+               T+ +LD     ++     V   + D
Sbjct: 14  GQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEALGRKVLARKAD 73

Query: 66  LQDWARTRAAV----SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINIS 121
           ++D A  RA V     + G +DV++ NA V  + R  ++ EE   D++ D+N+  V    
Sbjct: 74  VRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELSEEQW-DTVLDINLTGVWRTC 132

Query: 122 QVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVN 181
           + V   MI+    GSI+  SS+AG  AL G   Y+A+K  L  +T+T+A EL  Y IRVN
Sbjct: 133 KAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKTLANELAEYGIRVN 192

Query: 182 SVQPTVVMTQMGRTGWSDPAKAGPMLAKTP 211
           S+ P  V T M       P        K P
Sbjct: 193 SIHPYSVDTPM-----IAPEAMREAFLKYP 217

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  100 bits (252), Expect = 7e-26
 Identities = 58/204 (28%), Positives = 86/204 (42%), Gaps = 13/204 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP---NVQTVQVDLQDWARTRAAVSKV 79
           GIGR   +  ++  A ++   +     + +  A          Q D+       A V  V
Sbjct: 16  GIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFV 75

Query: 80  ----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
               G +DVL+NNA        +  DE +  D++  VN+  V   ++     M      G
Sbjct: 76  AARWGRLDVLVNNAGFGCGGTVVTTDEADW-DAVMRVNVGGVFLWAKYAIPIMQRQG-GG 133

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT 195
           SIVN +S        G   Y ASK A+ S+TR MAL+     IRVN+V P  + T   R 
Sbjct: 134 SIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRR 193

Query: 196 GWS---DPAKAGPML-AKTPLGRF 215
            ++   DP      L A+ P+ RF
Sbjct: 194 IFARHADPEALREALRARHPMNRF 217

Length = 252

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score =  100 bits (250), Expect = 8e-26
 Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 5/185 (2%)

Query: 23  GIGRCIVEKLSQHEAI-IIALSKTQANLDSL-KQAFPNVQTVQVDLQDWARTRAAVSKVG 80
           GIG+  VE L  H A  + A  +   +   L  +    V  +++D+ D    +AA ++  
Sbjct: 14  GIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVTDPESIKAAAAQAK 73

Query: 81  PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNV 140
            VDV+INNA V +    L+      +    DVN+  ++ ++Q  +  +  +   G+IVN+
Sbjct: 74  DVDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRLAQAFAPVLKANG-GGAIVNL 132

Query: 141 SSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP 200
           +S+A          YSASK+A  S+T+ +  EL      V SV P  + T+M     +  
Sbjct: 133 NSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVLSVHPGPIDTRM--AAGAGG 190

Query: 201 AKAGP 205
            K  P
Sbjct: 191 PKESP 195

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 99.8 bits (249), Expect = 2e-25
 Identities = 63/201 (31%), Positives = 96/201 (47%), Gaps = 10/201 (4%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQ---DWART-RAAVS 77
           G G  I  + +Q  A ++IA                    +Q D+    D      AA+S
Sbjct: 16  GFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADVTKRADVEAMVEAALS 75

Query: 78  KVGPVDVLINNAAVARFDR-FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
           K G +D+L+NNA +   ++  L++DEE   D +F VN+K++   +Q +   M + +  G 
Sbjct: 76  KFGRLDILVNNAGITHRNKPMLEVDEEEF-DRVFAVNVKSIYLSAQALVPHM-EEQGGGV 133

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT- 195
           I+N++S AG     G T Y+ASK  + + T+ MA+EL P NIRVN + P    T +    
Sbjct: 134 IINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRVNCLCPVAGETPLLSMF 193

Query: 196 GWSD-PAKAGPMLAKTPLGRF 215
              D P       A  PLGR 
Sbjct: 194 MGEDTPENRAKFRATIPLGRL 214

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 99.5 bits (248), Expect = 3e-25
 Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 18/209 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAV-- 76
           G+G    + L+Q  A ++  S+    L  L+            V +D+ D+   +AAV  
Sbjct: 20  GLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAH 79

Query: 77  --SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMI----- 129
             ++ G +D+L+NN+ V+   + +D+   +  D +FD N +    ++Q V+K MI     
Sbjct: 80  AETEAGTIDILVNNSGVSTTQKLVDVTPADF-DFVFDTNTRGAFFVAQEVAKRMIARAKG 138

Query: 130 --DHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
             + K  G I+N++S+AG   L    +Y  SKAA+  +TR MALE G + I VN++ P  
Sbjct: 139 AGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGY 198

Query: 188 VMTQMGRTGWSDPA--KAGPMLAKTPLGR 214
           + T++    W      K   ML +  +G+
Sbjct: 199 IDTEINHHHWETEQGQKLVSMLPRKRVGK 227

Length = 258

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 98.5 bits (246), Expect = 4e-25
 Identities = 58/203 (28%), Positives = 83/203 (40%), Gaps = 17/203 (8%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNVQT--VQVDLQDWARTRAAVSK 78
           GIG    + L +  A   I+  ++       L+   P V+   VQ D+  W +  AA  K
Sbjct: 11  GIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTSWEQLAAAFKK 70

Query: 79  V----GPVDVLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                G VD+LINNA +                +   DVN+  VIN + +    M D   
Sbjct: 71  AIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYLALHYM-DKNK 129

Query: 134 Q---GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL-GPYNIRVNSVQPTVVM 189
               G IVN+ S+AG        +YSASK  +   TR++A  L     +RVN++ P    
Sbjct: 130 GGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVRVNAICPGFTN 189

Query: 190 TQMGRTGWSDPAKAGPMLAKTPL 212
           T +        AK   ML   P 
Sbjct: 190 TPLLPD---LVAKEAEMLPSAPT 209

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 98.5 bits (246), Expect = 4e-25
 Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 10/178 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD----SLKQAFPNVQTVQVDLQDWARTR----A 74
           G+G    E L++  A +       A       +L+ A      +  DL D A  +    A
Sbjct: 18  GLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDA 77

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           A + +G +D L+NNA +       ++D +   D++ +VN++    + +     + D   +
Sbjct: 78  AAAALGGLDGLVNNAGITNSKSATELDIDTW-DAVMNVNVRGTFLMLRAALPHLRDSG-R 135

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           G IVN++S            Y ASK A+  +TR++A ELG   I VN++ P +  T+ 
Sbjct: 136 GRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEA 193

Length = 250

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 98.5 bits (246), Expect = 5e-25
 Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 14/175 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP--------NVQTVQVDLQDWARTRA 74
           GIG+ + ++L +  A +I ++++++ L+   +            V  +  DL D+     
Sbjct: 12  GIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISADLSDYEEVEQ 71

Query: 75  AVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
           A ++     GP D+++N A ++    F D+  E     + DVN    +N++  V   M +
Sbjct: 72  AFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGM-DVNYFGSLNVAHAVLPLMKE 130

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
            +  G IV VSS A    + G++ Y  SK AL  +  ++  EL PYNIRV+ V P
Sbjct: 131 QR-PGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIRVSVVYP 184

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 98.7 bits (246), Expect = 5e-25
 Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 18/205 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP--NVQTVQVDLQDWARTRAAVSK-- 78
           GIG+ +  +       ++AL    A L +   A        V  DL D A   AA++   
Sbjct: 13  GIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAA 72

Query: 79  --VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
              GPVDVL+ NA  AR     D    +       +N++A     + V + M+    +G+
Sbjct: 73  AERGPVDVLVANAGAARAASLHDTTPASWRADN-ALNLEAAYLCVEAVLEGMLKRS-RGA 130

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG 196
           +VN+ S+ G  AL GH  YSA+KA L   T+ +A+E G + IR N+V P  V TQ     
Sbjct: 131 VVNIGSVNGMAAL-GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQ----A 185

Query: 197 WSDPAKAGPML---AKT--PLGRFA 216
           W     A P +    K   PL  FA
Sbjct: 186 WEARVAANPQVFEELKKWYPLQDFA 210

Length = 257

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 98.1 bits (245), Expect = 6e-25
 Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 13/183 (7%)

Query: 22  PGIGRCIVEKLSQ--HEAIIIALSKTQANLDSLKQAFPN---VQTVQVDLQDWARTRAAV 76
            GIGR + E+L +    ++++ L++++  L  LK+       V TV+ DL D A     +
Sbjct: 9   RGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLRVTTVKADLSDAAGVEQLL 68

Query: 77  SKVGPVDV----LINNAAV-ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
             +  +D     LINNA       +   ID +  +   FD+N+ + + ++  + +     
Sbjct: 69  EAIRKLDGERDLLINNAGSLGPVSKIEFIDLDE-LQKYFDLNLTSPVCLTSTLLRAFKKR 127

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
            ++ ++VNVSS A     +G  +Y +SKAA D   R +A E    ++RV S  P VV T 
Sbjct: 128 GLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE--PDVRVLSYAPGVVDTD 185

Query: 192 MGR 194
           M R
Sbjct: 186 MQR 188

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  102 bits (256), Expect = 7e-25
 Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 16/177 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSKV 79
           GIG+   ++L+   A ++     +   ++             V  D+ D A  +AA  + 
Sbjct: 433 GIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEA 492

Query: 80  ----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
               G VD++++NA +A      +  +E+     FDVN      +++   + M    + G
Sbjct: 493 ALAFGGVDIVVSNAGIAISGPIEETSDEDW-RRSFDVNATGHFLVAREAVRIMKAQGLGG 551

Query: 136 SIVNVSS----IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
           SIV ++S      G         Y A+KAA   + R +ALELGP  IRVN V P  V
Sbjct: 552 SIVFIASKNAVNPGPNFGA----YGAAKAAELHLVRQLALELGPDGIRVNGVNPDAV 604

Length = 681

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 98.2 bits (245), Expect = 8e-25
 Identities = 55/160 (34%), Positives = 81/160 (50%), Gaps = 7/160 (4%)

Query: 59  VQTVQVDLQDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNI 114
            +  Q+DL D      A+ K+    G +DVL+NNA       FLD+D +     IF V++
Sbjct: 54  AEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEW-RKIFTVDV 112

Query: 115 KAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELG 174
                 SQ+ ++ M+     G I+N++S+   T L G + Y+A+K AL  +T+ MALEL 
Sbjct: 113 DGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELV 172

Query: 175 PYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGR 214
            + I VN+V P  + T M     SD  K        PLGR
Sbjct: 173 EHGILVNAVAPGAIATPMNGMDDSDV-KPDSR-PGIPLGR 210

Length = 256

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 97.7 bits (244), Expect = 1e-24
 Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 9/182 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQA---NLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV 79
           GIGR  VE+L    A     +K  A   + +S+    P V  +Q+D+ D A   AA    
Sbjct: 17  GIGRAFVEQLLARGA-----AKVYAAARDPESVTDLGPRVVPLQLDVTDPASVAAAAEAA 71

Query: 80  GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVN 139
             V +L+NNA + R    L   +E+ + +  + N    + +++  +  +  +   G+IVN
Sbjct: 72  SDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVN 130

Query: 140 VSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD 199
           V S+           YSASKAA  S+T+ +  EL P   RV  V P  + T M     + 
Sbjct: 131 VLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLDAP 190

Query: 200 PA 201
            A
Sbjct: 191 KA 192

Length = 238

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 97.7 bits (244), Expect = 1e-24
 Identities = 48/186 (25%), Positives = 71/186 (38%), Gaps = 17/186 (9%)

Query: 23  GIGRCIVEKLSQH--EAIIIALSKT---QANLDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG  I   L+    +  I          A    L+     V     D+ D +   A + 
Sbjct: 13  GIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLD 72

Query: 78  KV----GPVDVLINNAAVARFDR--FLDIDEENLIDSIFDVNIKAVINISQVVSKTMID- 130
                 G +D L+NNA V    R   LD+  E+  D +  +N++    ++Q V+K M+  
Sbjct: 73  AAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESF-DRVLAINLRGPFFLTQAVAKRMLAQ 131

Query: 131 ----HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 186
                    SIV VSS+           Y  SKA L    +  A  L    I V  V+P 
Sbjct: 132 PEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPG 191

Query: 187 VVMTQM 192
           ++ T M
Sbjct: 192 LIKTDM 197

Length = 256

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  101 bits (252), Expect = 1e-24
 Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 19/207 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           GIGR   ++ ++    ++   +          +  P+   + +D+ D A+ R    ++  
Sbjct: 16  GIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHR 75

Query: 80  --GPVDVLINNAAVARFDRF----LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
             G +DVL+NNA V   D      LD   E     +  +N+     +++   + MI+   
Sbjct: 76  EFGRIDVLVNNAGVT--DPTMTATLDTTLEE-FARLQAINLTGAYLVAREALRLMIEQGH 132

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM- 192
             +IVNV+S AG  AL   T YSASKAA+ S+TR++A E     IRVN+V P  V TQM 
Sbjct: 133 GAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMV 192

Query: 193 ---GRTGWSDPAKAGPMLAKTPLGRFA 216
               R G  DP+      ++ PLGR  
Sbjct: 193 AELERAGKLDPSAV---RSRIPLGRLG 216

Length = 520

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 96.9 bits (242), Expect = 1e-24
 Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 14/181 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN-----VQTVQVDL----QDWARTR 73
           GIG+   E+L++    +I +S+TQ  LD++ +          +T+  D       + R  
Sbjct: 12  GIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADFSAGDDIYERIE 71

Query: 74  AAVSKVGPVDVLINNAAVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
             +  +  + +L+NN  ++    + FL+  E+  +  I +VN+ A + +++++   M+  
Sbjct: 72  KELEGL-DIGILVNNVGISHSIPEYFLETPED-ELQDIINVNVMATLKMTRLILPGMVKR 129

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
           K +G+IVN+SS AG         YSASKA LD  +R +  E     I V S+ P +V T+
Sbjct: 130 K-KGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGIDVQSLLPYLVATK 188

Query: 192 M 192
           M
Sbjct: 189 M 189

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 96.8 bits (241), Expect = 2e-24
 Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 8/178 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTV--QVDLQDWARTRAAVSKV- 79
           G+GR     L+   A +  + +  A L       P        +DL D    R AV +V 
Sbjct: 18  GLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVN 77

Query: 80  ---GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
              G +D L+N A    +    D D +   D ++ VN+K  +N S+     +      G 
Sbjct: 78  RQFGRLDALVNIAGAFVWGTIADGDADT-WDRMYGVNVKTTLNASKAALPALTASG-GGR 135

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           IVN+ + A   A  G   Y+A+KA +  +T  +A EL    I VN+V P+++ T   R
Sbjct: 136 IVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNR 193

Length = 239

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 96.6 bits (241), Expect = 2e-24
 Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 15/202 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG  +  K  +    +I   + +  L   K+  PN+ T+ +D+ D     A    +   
Sbjct: 16  GIGLALARKFLEAGNTVIITGRREERLAEAKKELPNIHTIVLDVGDAESVEALAEALLSE 75

Query: 80  GP-VDVLINNAAVARFDRFLDIDEE-NLIDSIFDVNIKAVINISQVVSKTMIDH---KIQ 134
            P +D+LINNA + R     D   + +  D+  D N+   I +     K  + H   + +
Sbjct: 76  YPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIGPIRLI----KAFLPHLKKQPE 131

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
            +IVNVSS      +  + +Y A+KAAL S T  +  +L    + V  + P  V T++  
Sbjct: 132 ATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTGVEVVEIVPPAVDTELHE 191

Query: 195 TGWSDPAKAGPMLAKTPLGRFA 216
                    G    K PL  F 
Sbjct: 192 ---ERRNPDGGTPRKMPLDEFV 210

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 97.3 bits (243), Expect = 2e-24
 Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 18/180 (10%)

Query: 23  GIGRCIVEKLSQHEA------IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAV 76
           GIG      L+   A      +  AL+K  A           V    +D+ D A   A +
Sbjct: 16  GIGLATARALAALGARVAIGDLDEALAKETA------AELGLVVGGPLDVTDPASFAAFL 69

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
             V    GP+DVL+NNA V     FLD  +  +   I DVN+  VI  S++ +  M+  +
Sbjct: 70  DAVEADLGPIDVLVNNAGVMPVGPFLDEPDA-VTRRILDVNVYGVILGSKLAAPRMV-PR 127

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            +G +VNV+S+AGK  + G   Y ASK A+   T    LEL    + V+ V P+ V T++
Sbjct: 128 GRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTEL 187

Length = 273

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 96.2 bits (240), Expect = 2e-24
 Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 31/224 (13%)

Query: 23  GIGRCIVEKLSQHEAIIIALS-----KTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG  IV +L++     + L+     + QA ++ L+    +V+  Q+D+ D A   AA  
Sbjct: 11  GIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTDDASIEAAAD 70

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDE-ENLIDSIFDVNIKAVINISQVVSKTMID-- 130
            V    G +D+L+NNA +A F  F D              N    ++    V++ ++   
Sbjct: 71  FVEEKYGGLDILVNNAGIA-FKGFDDSTPTREQARETMKTNFFGTVD----VTQALLPLL 125

Query: 131 HKIQ-GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
            K   G IVNVSS  G       + Y  SKAAL+++TR +A EL    I+VN+  P  V 
Sbjct: 126 KKSPAGRIVNVSSGLGSLT----SAYGVSKAALNALTRILAKELKETGIKVNACCPGWVK 181

Query: 190 TQM-GRTGWSDPAKAGPMLA--------KTPLGRFAGKLKPKPW 224
           T M G      P +                P G+F    K  PW
Sbjct: 182 TDMGGGKAPKTPEEGAETPVYLALLPPDGEPTGKFFSDKKVVPW 225

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 96.5 bits (241), Expect = 3e-24
 Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 10/198 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG  I        A ++   +        + A    +    D++D  +  A V  +   
Sbjct: 17  GIGAGIARAFLAAGATVVVCGRRAPETVDGRPA----EFHAADVRDPDQVAALVDAIVER 72

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            G +DVL+NNA  + +    +       + I ++N+ A + ++Q  +  M      GSIV
Sbjct: 73  HGRLDVLVNNAGGSPYALAAEASP-RFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIV 131

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS 198
           N+ S++G+    G   Y A+KA L ++TR++A+E  P  +RVN+V   +V T+     + 
Sbjct: 132 NIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAP-KVRVNAVVVGLVRTEQSELHYG 190

Query: 199 DPAKAGPMLAKTPLGRFA 216
           D      + A  PLGR A
Sbjct: 191 DAEGIAAVAATVPLGRLA 208

Length = 252

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 96.8 bits (241), Expect = 3e-24
 Identities = 60/200 (30%), Positives = 99/200 (49%), Gaps = 13/200 (6%)

Query: 23  GIGRCIVEKLSQHE-AIIIALSKTQANLDS---LKQAFPNVQTVQVDLQD----WARTRA 74
           GIG+ I E+L++   A+ +A    +   ++   + QA       ++D+ D    ++    
Sbjct: 11  GIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQ 70

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           A  K G  DV++NNA VA     L+I EE L   +++VN+K V+   Q  ++        
Sbjct: 71  AAEKFGGFDVMVNNAGVAPITPILEITEEEL-KKVYNVNVKGVLFGIQAAARQFKKQGHG 129

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G I+N +SIAG       + YS++K A+  +T+T A EL P  I VN+  P +V T M  
Sbjct: 130 GKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPM-- 187

Query: 195 TGWSDPAKAGPMLAKTPLGR 214
             W +  +    +A  P+G 
Sbjct: 188 --WEEIDEETSEIAGKPIGE 205

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 94.2 bits (235), Expect = 4e-24
 Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 17/162 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIAL-------SKTQANLDSLKQAFPNVQTVQVDLQDWARTRAA 75
           G+G  +   L+   A  + L             +  L+     V     D+ D     A 
Sbjct: 11  GLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDVADRDALAAL 70

Query: 76  VSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
           ++ +    GP+D +++NA V       ++  E   + +    +    N+ ++        
Sbjct: 71  LAALPAALGPLDGVVHNAGVLDDGPLEELTPERF-ERVLAPKVTGAWNLHELTR-----D 124

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL 173
              G+ V  SS+AG     G   Y+A+ AALD++      E 
Sbjct: 125 LDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 95.6 bits (238), Expect = 7e-24
 Identities = 54/181 (29%), Positives = 86/181 (47%), Gaps = 11/181 (6%)

Query: 21  KPGIGRCIVEKLSQHEAIIIA--LSKTQANLD--SLKQAFPN-VQTVQVDLQDWARTRAA 75
           K GIG  I  +L      +IA   S      D         + V+  ++D+ D      A
Sbjct: 11  KRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEA 70

Query: 76  VSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
           ++++    GPVD+L+NNA + R   F  +  +   D I + N+ +V N++Q +   M + 
Sbjct: 71  LAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVI-NTNLNSVFNVTQPLFAAMCEQ 129

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
              G I+N+SS+ G     G T YSA+KA +   T+ +A E   Y I VN + P  + T 
Sbjct: 130 G-YGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATP 188

Query: 192 M 192
           M
Sbjct: 189 M 189

Length = 245

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 93.2 bits (232), Expect = 5e-23
 Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 14/202 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK 78
           G+G  I   L+   A ++   +  A L++    L+ A    + +  D+ D     AA ++
Sbjct: 22  GLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFAR 81

Query: 79  VGP----VDVLINNAAVARFDR--FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           +      +D+L+NN   AR DR    ++D+  +   + + ++ A I +S++ ++ M    
Sbjct: 82  IDAEHGRLDILVNNVG-AR-DRRPLAELDDAAIRALL-ETDLVAPILLSRLAAQRMKRQG 138

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G I+ ++SIAG+ A  G  +Y A+K  L  + R +A E GP+ I  N++ P    T+ 
Sbjct: 139 -YGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATET 197

Query: 193 GRTGWSDPAKAGPMLAKTPLGR 214
                +DPA    +  +TPLGR
Sbjct: 198 NAAMAADPAVGPWLAQRTPLGR 219

Length = 256

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 92.9 bits (231), Expect = 6e-23
 Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 13/203 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIA-----LSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG  I ++L++    + A       + +A L        + + V+ D+  +   +AAV+
Sbjct: 11  GIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVA 70

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           KV    GP+DVL+NNA + R   F  +  E    ++ D N+ +V N++Q V   M +   
Sbjct: 71  KVEAELGPIDVLVNNAGITRDATFKKMTYEQW-SAVIDTNLNSVFNVTQPVIDGMRERGW 129

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N+SS+ G+    G T YSA+KA +   T+ +A E     + VN++ P  + T M 
Sbjct: 130 -GRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMV 188

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
                D   +  ++A+ P+GR  
Sbjct: 189 MAMREDVLNS--IVAQIPVGRLG 209

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 92.7 bits (231), Expect = 9e-23
 Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 18/187 (9%)

Query: 33  SQHEAIIIALSKTQANLDSLKQAFPN-VQTVQVDLQDWAR----TRAAVSKVGPVDVLIN 87
           S  EA         A    L    P     +Q DL D         A V+  G +D L+N
Sbjct: 40  SAAEA--------DALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLDALVN 91

Query: 88  NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT 147
           NA+         I E    D +F  N+KA   +SQ  +  +   K +G+IVN++ I  + 
Sbjct: 92  NASSFYPTPLGSITEAQW-DDLFASNLKAPFFLSQAAAPQL--RKQRGAIVNITDIHAER 148

Query: 148 ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPML 207
            L+G+ +Y A+KAAL+ +TR++ALEL P  +RVN+V P  ++       + + A+   +L
Sbjct: 149 PLKGYPVYCAAKAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFDEEARQA-IL 206

Query: 208 AKTPLGR 214
           A+TPL R
Sbjct: 207 ARTPLKR 213

Length = 249

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 93.0 bits (232), Expect = 1e-22
 Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 30/220 (13%)

Query: 24  IGRCIVEKLSQHEAIIIALSKTQANLD----SLKQAFPNVQTVQVDLQDWARTRAA---- 75
           +G  + ++L++  A +  L + Q   +     +K A      V+ D+ D      A    
Sbjct: 22  LGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQI 81

Query: 76  VSKVGPVDVLIN----NAAVARFDR-----------FLDIDEENLIDSIFDVNIKAVINI 120
           +   GP D+LIN    N   A  D            F D+DEE   + +FD+N+   +  
Sbjct: 82  LEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEG-FEFVFDLNLLGTLLP 140

Query: 121 SQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRV 180
           +QV +K M+  K  G+I+N+SS+   T L     YSA+KAA+ + T+ +A+      IRV
Sbjct: 141 TQVFAKDMVGRK-GGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRV 199

Query: 181 NSVQPTVVMTQMGRTGWSDP-----AKAGPMLAKTPLGRF 215
           N++ P   +T+  R    +       +A  +LA TP+GRF
Sbjct: 200 NAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRF 239

Length = 278

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 95.3 bits (237), Expect = 2e-22
 Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQ-TVQVDLQDWARTRAAVSKV-- 79
           GIGR + ++ +     ++ + +       L +A  +   +VQ D+ D A   +A +++  
Sbjct: 280 GIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQA 339

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENL--IDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
             G +DVL+NNA +A  + F    E++      ++DVN+      ++  ++ M   +  G
Sbjct: 340 RWGRLDVLVNNAGIA--EVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQ-GG 394

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT----Q 191
            IVN+ SIA   AL     Y ASKAA+  ++R++A E  P  IRVN+V P  + T     
Sbjct: 395 VIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLA 454

Query: 192 MGRTGWSDPAKAGPMLAKTPLGR 214
           +  +G +D      +  + PLGR
Sbjct: 455 LKASGRADFDS---IRRRIPLGR 474

Length = 520

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 91.6 bits (228), Expect = 2e-22
 Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 17/204 (8%)

Query: 23  GIGRCIVEKLSQHEAIII-----ALSKTQANLDSLKQAFPNVQTVQVDL---QDWARTRA 74
           GIG+ I  +L++  A ++     +          +++       V+ D+   QD     A
Sbjct: 9   GIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQPQDVEEMFA 68

Query: 75  AV-SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           AV  + G +DVL++NAA   F    ++   +  D+  + N+KA+++ +Q  +K M +   
Sbjct: 69  AVKERFGRLDVLVSNAAAGAFRPLSELTPAHW-DAKMNTNLKALVHCAQQAAKLMRERG- 126

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IV +SS+    AL  +     +KAAL+++ R +A+ELGP  IRVN+V P V+ T   
Sbjct: 127 GGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVSPGVIDTDAL 186

Query: 194 RTGWSDPAKAGPM---LAKTPLGR 214
                 P +   +    A TP GR
Sbjct: 187 A---HFPNREDLLEAAAANTPAGR 207

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 91.3 bits (227), Expect = 3e-22
 Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 12/156 (7%)

Query: 67  QDWART-RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLID--SIFDVNIKAVINISQV 123
             W      A    G +DVL+NNA +        ++   L +   + D+N+  V   ++ 
Sbjct: 64  DGWTAVVDTAREAFGRLDVLVNNAGILTGG---TVETTTLEEWRRLLDINLTGVFLGTRA 120

Query: 124 VSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP--YNIRVN 181
           V   M +    GSI+N+SSI G         Y+ASK A+  +T++ ALE     Y IRVN
Sbjct: 121 VIPPMKE-AGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIRVN 179

Query: 182 SVQPTVVMTQMGRTGWSDPAKAGP-MLAKTPLGRFA 216
           SV P  + T M  T     A+        TP+GR  
Sbjct: 180 SVHPGYIYTPM--TDELLIAQGEMGNYPNTPMGRAG 213

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 91.5 bits (228), Expect = 3e-22
 Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 8/176 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN---VQTVQVDL---QDWARTRAAV 76
           GIG+ + E L+   A ++ + +    L++L    P     + V  DL          A  
Sbjct: 16  GIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARA 75

Query: 77  SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
            ++G ++VLINNA V  F    D D E  I+ +  +N+ A + +++ +   ++  +    
Sbjct: 76  REMGGINVLINNAGVNHFALLEDQDPEA-IERLLALNLTAPMQLTRALL-PLLRAQPSAM 133

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           +VNV S  G     G+  Y ASK AL   +  +  EL    +RV  + P    T M
Sbjct: 134 VVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAM 189

Length = 263

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 91.2 bits (227), Expect = 3e-22
 Identities = 64/203 (31%), Positives = 98/203 (48%), Gaps = 11/203 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKT----QANLDSLKQAFPNVQTVQV---DLQDWARTRAA 75
           GIG  I + L+Q  A +I  S+     QA  D++  A    + +     +++      A 
Sbjct: 19  GIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAH 78

Query: 76  V-SKVGPVDVLINNAAV-ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +  + G +D+L+NNAA    F   LD D         DVNI+    +S    K M +   
Sbjct: 79  IRERHGRLDILVNNAAANPYFGHILDTDL-GAFQKTVDVNIRGYFFMSVEAGKLMKEQG- 136

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            GSIVNV+S+ G +  +   IYS +KAA+ S+T+  A E  P+ IRVN++ P +  T+  
Sbjct: 137 GGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFA 196

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
              + + A     LA  PL R A
Sbjct: 197 SALFKNDAILKQALAHIPLRRHA 219

Length = 252

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 90.6 bits (225), Expect = 6e-22
 Identities = 62/187 (33%), Positives = 96/187 (51%), Gaps = 18/187 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIAL---SKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV 79
           GIGR I E   +  A +  L   ++ +A    L++    V T++ D+ +  + + +   V
Sbjct: 18  GIGRAIAEAFLREGAKVAVLYNSAENEA--KELREK--GVFTIKCDVGNRDQVKKSKEVV 73

Query: 80  ----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ- 134
               G VDVL+NNA +     F + DEE   + +  +N+   I       + +   K+  
Sbjct: 74  EKEFGRVDVLVNNAGIMYLMPFEEFDEEK-YNKMIKINLNGAI---YTTYEFLPLLKLSK 129

Query: 135 -GSIVNVSSIAG-KTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            G+IVN++S AG  TA EG T Y+ +KA +  +TR +A ELG Y IRVN+V P  V T M
Sbjct: 130 NGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDM 189

Query: 193 GRTGWSD 199
             +G S 
Sbjct: 190 TLSGKSQ 196

Length = 255

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 89.8 bits (223), Expect = 2e-21
 Identities = 63/220 (28%), Positives = 101/220 (45%), Gaps = 29/220 (13%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAA--- 75
            +G  +   L+Q  A + AL + Q   D     +         +  D+ D A    A   
Sbjct: 16  VLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAADVLDRASLERAREE 75

Query: 76  -VSKVGPVDVLINNAA--------------VARFDRFLDIDEENLIDSIFDVNIKAVINI 120
            V++ G VD+LIN A                     F D+DEE   + +FD+N+      
Sbjct: 76  IVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEG-WEFVFDLNLNGSFLP 134

Query: 121 SQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRV 180
           SQV  K M++ K  GSI+N+SS+   + L     YSA+KAA+ + T+ +A+E     +RV
Sbjct: 135 SQVFGKDMLEQK-GGSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQWLAVEFATTGVRV 193

Query: 181 NSVQPTVVMTQMGRTGWSDP-----AKAGPMLAKTPLGRF 215
           N++ P   +T   R    +P      ++  +L +TP+GRF
Sbjct: 194 NAIAPGFFVTPQNRKLLINPDGSYTDRSNKILGRTPMGRF 233

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 89.2 bits (222), Expect = 2e-21
 Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 11/179 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVS 77
           GIG  +   L++  A ++  ++ +  L+ +K        P+   V +D+ D       V 
Sbjct: 14  GIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPLDMSDLEDAEQVVE 73

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +     G +D+LINNA ++    F D   +     I +VN    + +++     +I+   
Sbjct: 74  EALKLFGGLDILINNAGISMRSLFHDTSIDVDRK-IMEVNYFGPVALTKAALPHLIERS- 131

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           QGSIV VSSIAGK  +   T Y+ASK AL     ++  EL   NI V  V P ++ T +
Sbjct: 132 QGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNISVTVVCPGLIDTNI 190

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 88.9 bits (221), Expect = 3e-21
 Identities = 70/215 (32%), Positives = 104/215 (48%), Gaps = 39/215 (18%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQAN---LDSLKQAFPNVQTVQVDLQDWARTRAAVSKV 79
           GIG  I  +L++  AI +   ++  +    + L+   P  + VQVDL D A+ R AV + 
Sbjct: 18  GIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQT 77

Query: 80  ----GPVDVLINNAAV-------ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTM 128
               G +D L+NNA V       A  + F+   E NLI   +            V++   
Sbjct: 78  VAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLI-HYY------------VMAHYC 124

Query: 129 IDH--KIQGSIVNVSSIAGKTALEGH---TIYSASKAALDSITRTMALELGPYNIRVNSV 183
           + H    +G+IVN+SS   KTAL G    + Y+A+K A  ++TR  A+ L    +RVN+V
Sbjct: 125 LPHLKASRGAIVNISS---KTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAV 181

Query: 184 QPTVVMTQMGRT---GWSDP-AKAGPMLAKTPLGR 214
            P  VMT +       + DP AK   + AK PLG 
Sbjct: 182 IPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGH 216

Length = 258

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 88.7 bits (220), Expect = 3e-21
 Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 10/200 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRA---- 74
           G+G  I    ++  A ++  ++T++ LD     ++ A      V  DL     T      
Sbjct: 21  GLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQ 80

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           AV   G +D+++NN      +  L    ++L D+ F  N+     ++      M++H   
Sbjct: 81  AVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADA-FTFNVATAHALTVAAVPLMLEHSGG 139

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           GS++N+SS  G+ A  G   Y  +KAAL   TR  AL+L P  IRVN++ P  ++T    
Sbjct: 140 GSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALE 198

Query: 195 TGWSDPAKAGPMLAKTPLGR 214
              ++     PM   TPL R
Sbjct: 199 VVAANDELRAPMEKATPLRR 218

Length = 263

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 88.2 bits (219), Expect = 4e-21
 Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 24/184 (13%)

Query: 24  IGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRA--------- 74
           IG+   + L    A +I        L+ LK+   N+   +V   +   T           
Sbjct: 14  IGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELDITSKESIKELIES 73

Query: 75  AVSKVGPVDVLINNAAVARFD---RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
            + K G +D+LINNA  +      RF +   E   + + +VN+      SQ   K     
Sbjct: 74  YLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVL-NVNLGGAFLCSQAFIKLFKKQ 132

Query: 132 KIQGSIVNVSSIAG----------KTALEGHTIYSASKAALDSITRTMALELGPYNIRVN 181
             +GSI+N++SI G           T +     YS  KA +  +T+ +A       IRVN
Sbjct: 133 G-KGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKYLAKYYADTGIRVN 191

Query: 182 SVQP 185
           ++ P
Sbjct: 192 AISP 195

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 88.6 bits (220), Expect = 4e-21
 Identities = 60/208 (28%), Positives = 91/208 (43%), Gaps = 16/208 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAV 76
           GIG  I    ++  A +       A  +    A         V  V  D+ D A   AAV
Sbjct: 18  GIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAV 77

Query: 77  SK----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           +      GP+DVL+NNA +  F   L + +E+     F V++    N  + V   M++  
Sbjct: 78  AAAEEAFGPLDVLVNNAGINVFADPLAMTDEDW-RRCFAVDLDGAWNGCRAVLPGMVERG 136

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             GSIVN++S      + G   Y  +K  L  +TR + +E    N+RVN++ P  + TQ+
Sbjct: 137 R-GSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQL 195

Query: 193 GRTGWS---DPAKA-GPMLAKTPLGRFA 216
               W+   DPA A    LA  P+ R  
Sbjct: 196 TEDWWNAQPDPAAARAETLALQPMKRIG 223

Length = 260

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 88.1 bits (219), Expect = 4e-21
 Identities = 59/208 (28%), Positives = 95/208 (45%), Gaps = 19/208 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD----SLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           G+GR + E L+Q  A +  +   Q  L+            V+    ++ D     A  ++
Sbjct: 16  GLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQ 75

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLID--------SIFDVNIKAVINISQVVSK 126
           +    G ++ LINNA + R    +   +  +          S+ DVN+  V    +  + 
Sbjct: 76  IAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAA 135

Query: 127 TMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 186
            MI+   +G I+N+SSIA +    G T YSASKA + ++T T A EL  Y IRV ++ P 
Sbjct: 136 KMIESGSKGVIINISSIA-RAGNMGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPG 194

Query: 187 VVMTQMGRTGWSDPAKAGPMLAKTPLGR 214
           V+ T+M  T    P     +    P+GR
Sbjct: 195 VIETEM--TAAMKPEALERLEKMIPVGR 220

Length = 253

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 87.9 bits (218), Expect = 5e-21
 Identities = 58/206 (28%), Positives = 106/206 (51%), Gaps = 11/206 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD----SLKQAFPNVQTVQVDLQDWARTRAAV-- 76
           GIG  + E L+Q  A +I   +  A L     SLK    +   +  D+ D    RAA+  
Sbjct: 21  GIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDA 80

Query: 77  --SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
             +++GP+D+L+NNA + +F   L+    +  + +   NI +V  + Q V++ MI     
Sbjct: 81  FEAEIGPIDILVNNAGM-QFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-A 138

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G I+N++S+    A  G   Y+A+K A+ ++T+ MA +   + ++ N++ P    T +  
Sbjct: 139 GKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNA 198

Query: 195 TGWSDPAKAGPMLAKTPLGRFAGKLK 220
              +DP  +  +  +TP GR+ GK++
Sbjct: 199 ALVADPEFSAWLEKRTPAGRW-GKVE 223

Length = 255

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 87.4 bits (217), Expect = 8e-21
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 8/173 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD---SLKQAFPNVQTVQVDLQDWARTRAA---- 75
           GIG  I ++L+   A ++         +      Q  P    VQ D+   A+ ++A    
Sbjct: 12  GIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTSEAQVQSAFEQA 71

Query: 76  VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
           V + G +D++++NA +A      +   E+  +   D+N+     +S+   + M    I G
Sbjct: 72  VLEFGGLDIVVSNAGIATSSPIAETSLEDW-NRSMDINLTGHFLVSREAFRIMKSQGIGG 130

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
           +IV  +S            YSA+KAA   + R +ALE G   IRVN+V P  V
Sbjct: 131 NIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTVNPDAV 183

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 87.1 bits (216), Expect = 1e-20
 Identities = 55/205 (26%), Positives = 104/205 (50%), Gaps = 19/205 (9%)

Query: 23  GIGRCIVEKLSQHEAIII-----ALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRA--- 74
           G+G+ I   L++  A I+       S+TQ  +++L + F    ++  DL D    +A   
Sbjct: 16  GLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRF---LSLTADLSDIEAIKALVD 72

Query: 75  -AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            AV + G +D+L+NNA + R     +  E++  D + +VN+K+V  ++Q  +K  +    
Sbjct: 73  SAVEEFGHIDILVNNAGIIRRADAEEFSEKDW-DDVMNVNLKSVFFLTQAAAKHFLKQGR 131

Query: 134 QGSIVNVSSIAGKTALEGHTI---YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            G I+N++S+    + +G      Y+ASK A+  +T+ +A E     I VN++ P  + T
Sbjct: 132 GGKIINIASM---LSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGINVNAIAPGYMAT 188

Query: 191 QMGRTGWSDPAKAGPMLAKTPLGRF 215
              +   +D  +   +L + P GR+
Sbjct: 189 NNTQALRADEDRNAAILERIPAGRW 213

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 87.0 bits (216), Expect = 1e-20
 Identities = 53/186 (28%), Positives = 75/186 (40%), Gaps = 20/186 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALS-----KTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           G+G  I    ++  A  + +      K +A    L+        VQ DL D    R  V+
Sbjct: 17  GLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVA 76

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                 G +D L+N A +      LD   E L D  F VN++A   + Q   K M   K 
Sbjct: 77  AADEAFGRLDALVNAAGLTDRGTILDTSPE-LFDRHFAVNVRAPFFLMQEAIKLMRRRKA 135

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           +G+IVN+ S++          Y ASK AL ++TR  A  L    IRVN +          
Sbjct: 136 EGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNI-------- 187

Query: 194 RTGWSD 199
             GW  
Sbjct: 188 --GWMA 191

Length = 260

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 86.5 bits (215), Expect = 2e-20
 Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 20/191 (10%)

Query: 22  PGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRA--- 74
           PG+GR +  + ++  A ++  ++T   LD +             V  D+ D  +      
Sbjct: 15  PGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVA 74

Query: 75  -AVSKVGPVDVLINNA-AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            A+ + G VD L+NNA  V       D D  +      ++N+   + ++Q  +  + +  
Sbjct: 75  LALERFGRVDALVNNAFRVPSMKPLADADFAHWRAV-IELNVLGTLRLTQAFTPALAESG 133

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             GSIV ++S+  + +   +  Y  +K AL + ++++A ELGP  IRVNSV P  +    
Sbjct: 134 --GSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYI---- 187

Query: 193 GRTGWSDPAKA 203
               W DP K 
Sbjct: 188 ----WGDPLKG 194

Length = 258

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 86.3 bits (214), Expect = 2e-20
 Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 13/187 (6%)

Query: 23  GIGRCIVEKLSQHE-AIIIALSKTQANLD----SLKQAFPNVQTVQVDLQDWARTR---- 73
           GIG  I  +L+    A+ +  + + A  D     ++ A      VQ D+ D A       
Sbjct: 16  GIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFD 75

Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           AA +  G +DVL+NNA V       D D E   D     N++    + +  ++ +     
Sbjct: 76  AAETAFGRIDVLVNNAGVMPLGTIADFDLE-DFDRTIATNLRGAFVVLREAARHLGQ--- 131

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N+S+      L G+  Y+ASKAA++ +   +A EL    I VN+V P  V T++ 
Sbjct: 132 GGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELF 191

Query: 194 RTGWSDP 200
             G S  
Sbjct: 192 FNGKSAE 198

Length = 245

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 86.2 bits (214), Expect = 3e-20
 Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 17/202 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV-- 79
            IG  +   L    A +  +     N  ++  +     + +  D+ D A    AV+ V  
Sbjct: 17  LIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVA 76

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G VD+L+N A     D  L     + + +  DVN+ +   ++Q     +   +  G+I
Sbjct: 77  RFGRVDILVNLACT-YLDDGLASSRADWLAA-LDVNLVSAAMLAQAAHPHLA--RGGGAI 132

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP----TVVMTQMG 193
           VN +SI+ K A  G  +Y ASKAA+  +TR+MA++L P  IRVNSV P    + VM ++ 
Sbjct: 133 VNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELS 192

Query: 194 RTGWSDPAKAGPMLAKT-PLGR 214
                D AKA  + A    LGR
Sbjct: 193 G---GDRAKADRVAAPFHLLGR 211

Length = 261

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 85.6 bits (212), Expect = 4e-20
 Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 20/187 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANL-DSLKQAF------PNVQTVQVDLQDWARTRAA 75
           GIG       ++H A ++      A++ D   QA       P++  V  D+   A  RAA
Sbjct: 15  GIGEATARLFAKHGARVVI-----ADIDDDAGQAVAAELGDPDISFVHCDVTVEADVRAA 69

Query: 76  V----SKVGPVDVLINNAAV--ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMI 129
           V    ++ G +D++ NNA V  A     L+   E   + + DVN+      ++  ++ MI
Sbjct: 70  VDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEF-ERVLDVNVYGAFLGTKHAARVMI 128

Query: 130 DHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
             K +GSIV+V+S+AG     G   Y+ASK A+  +TR+ A ELG + IRVN V P  V 
Sbjct: 129 PAK-KGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVNCVSPYGVA 187

Query: 190 TQMGRTG 196
           T +   G
Sbjct: 188 TPLLTAG 194

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 84.7 bits (210), Expect = 6e-20
 Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 14/184 (7%)

Query: 23  GIGRCIVEKL-SQHEAIIIAL---SKTQANLDSLKQAFPNVQTVQVDLQD----WARTRA 74
           GIG  +V +L ++    +IA          L +L  +   +  +++D+ D     A   A
Sbjct: 9   GIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEIAESAEAVA 68

Query: 75  AVSKVGPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                  +DVLINNA +   +    ++D E+L   +F VN+   + ++Q     ++    
Sbjct: 69  ERLGDAGLDVLINNAGILHSYGPASEVDSEDL-LEVFQVNVLGPLLLTQAF-LPLLLKGA 126

Query: 134 QGSIVNVSSIAGK---TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
           +  I+N+SS  G        G   Y ASKAAL+ +T+++A+EL    I V S+ P  V T
Sbjct: 127 RAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGITVVSLHPGWVRT 186

Query: 191 QMGR 194
            MG 
Sbjct: 187 DMGG 190

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 84.8 bits (210), Expect = 8e-20
 Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 16/163 (9%)

Query: 62  VQVDLQDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAV 117
           V  D+   A  +A V +     G +D   NNA +      L    E   D+I  VN+K V
Sbjct: 61  VACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGV 120

Query: 118 -----INISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALE 172
                  I  ++++        G+IVN +S+AG  A    +IY+ASK A+  +T++ A+E
Sbjct: 121 WLCMKYQIPLMLAQG------GGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIE 174

Query: 173 LGPYNIRVNSVQPTVVMTQMGRTGW-SDPAKAGPMLAKTPLGR 214
                IRVN+V P V+ T M R  + +DP KA    A  P+GR
Sbjct: 175 YAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGR 217

Length = 253

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 85.0 bits (210), Expect = 8e-20
 Identities = 54/177 (30%), Positives = 91/177 (51%), Gaps = 10/177 (5%)

Query: 23  GIGRCIVEK-LSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWAR----TRAAVS 77
           GIGR   +  + +   + IA    +A   +  +  P    + +D+ D A       A V 
Sbjct: 14  GIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTDQASIDRCVAALVD 73

Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           + G +D+L+NNAA+      +DI  E+  D +F +N+   + + Q V++ MI     G I
Sbjct: 74  RWGSIDILVNNAALFDLAPIVDITRESY-DRLFAINVSGTLFMMQAVARAMIAQGRGGKI 132

Query: 138 VNVSSIAGK--TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           +N++S AG+   AL G   Y A+KAA+ S+T++  L L  + I VN++ P VV  + 
Sbjct: 133 INMASQAGRRGEALVGV--YCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEH 187

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 83.6 bits (207), Expect = 2e-19
 Identities = 54/234 (23%), Positives = 91/234 (38%), Gaps = 48/234 (20%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLK--------------------QAFPNVQTV 62
           GIGR I  +L++  A ++  +KT +  D+                      QA P    +
Sbjct: 14  GIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAGGQALP----I 69

Query: 63  QVDLQDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVI 118
            VD++D  + RA V       G +D+L+NNA         D   +   D +  VN++   
Sbjct: 70  VVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSLVEDTPAKRF-DLMQRVNLRG-- 126

Query: 119 NISQVVSKTMIDHKIQ---GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP 175
             + ++S+  + H ++   G I+N+S         G   Y+A KA +  +T  +A EL  
Sbjct: 127 --TYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLAAELRR 184

Query: 176 YNIRVNS-----VQPTVVMTQMGRTG----WSDP---AKAGPMLAKTPLGRFAG 217
           + I VNS        T   T++           P   + A   +   P     G
Sbjct: 185 HGIAVNSLWPSTAIETPAATELSGGSDPARARSPEILSDAVLAILSRPAAERTG 238

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 83.1 bits (206), Expect = 3e-19
 Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 15/205 (7%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQA--NLDSLKQAFP-NVQTVQVDLQDWARTRAAVS 77
           GIG  I   L++  A   II  S  +A    + L + +    +  + D+           
Sbjct: 19  GIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKCDVSSQESVEKTFK 78

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           ++    G +D+LI NA +      LD   E   + + DVN+  V N +Q  +K       
Sbjct: 79  QIQKDFGKIDILIANAGITVHKPALDYTYEQW-NKVIDVNLNGVFNCAQAAAKIFKKQG- 136

Query: 134 QGSIVNVSSIAGKTALEGHTI--YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
           +GS++  +S++G           Y+ASKAA+  + +++A+E   Y IRVNS+ P  + T 
Sbjct: 137 KGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYFIRVNSISPGYIDTD 196

Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFA 216
           +  T + D        +  PL R A
Sbjct: 197 L--TDFVDKELRKKWESYIPLKRIA 219

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 82.7 bits (205), Expect = 3e-19
 Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 5/172 (2%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIG  I  +L+     ++   +    LD L    P      VDL D     AAV ++G +
Sbjct: 14  GIGAAIARELAPTH-TLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRL 72

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           DVL++NA VA      +   +    +  +VN+ A   +++++   +      G +V ++S
Sbjct: 73  DVLVHNAGVADLGPVAESTVDEWRAT-LEVNVVAPAELTRLLLPAL--RAAHGHVVFINS 129

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
            AG  A  G   Y+ASK AL ++   +  E  P N+RV SV P    T M R
Sbjct: 130 GAGLRANPGWGSYAASKFALRALADALREE-EPGNVRVTSVHPGRTDTDMQR 180

Length = 227

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 83.1 bits (206), Expect = 4e-19
 Identities = 65/214 (30%), Positives = 97/214 (45%), Gaps = 25/214 (11%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVS---- 77
           GIGR +VE+     A +  L ++   L SL+Q F  +V  V+ D+  +A  + AV     
Sbjct: 17  GIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVD 76

Query: 78  KVGPVDVLINNAAVARFD---RFLDIDEENL---IDSIFDVNIKAVINISQVVSKTMIDH 131
             G +D  + NA +  +D     +DI  E L    D IF+VN+K  +  ++     +   
Sbjct: 77  AFGKLDCFVGNAGI--WDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALK-- 132

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
              GS++   S +      G  +Y+ASK A+  + R +A EL P  IRVN V P   +T 
Sbjct: 133 ASGGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK-IRVNGVAPGGTVTD 191

Query: 192 --------MGRTGWSD-PAKAGPMLAKTPLGRFA 216
                    G T  SD P  A  + A TPL    
Sbjct: 192 LRGPASLGQGETSISDSPGLADMIAAITPLQFAP 225

Length = 263

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 82.9 bits (205), Expect = 4e-19
 Identities = 53/225 (23%), Positives = 85/225 (37%), Gaps = 32/225 (14%)

Query: 23  GIGRCIVEKLSQ-HEAIIIALSKTQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVS 77
           GIGR I  +L+     I I           +      A       Q D+ + +   A + 
Sbjct: 12  GIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGELSDHEALLD 71

Query: 78  KV----GPVDVLINNAAVARFDR--FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
           +     G +D L+NNA +A   R   LD+ E++  D +  +N++    ++Q V++ M++ 
Sbjct: 72  QAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSF-DRLIAINLRGPFFLTQAVARRMVEQ 130

Query: 132 -----KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 186
                    SI+ V+SI           Y  SKA L   TR +A  L    I V+ ++P 
Sbjct: 131 PDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADEGIAVHEIRPG 190

Query: 187 VVMTQMGRTGWSDPAKAGPML-AKTPLGRFAGKLKPKPWNRWLLP 230
           ++ T M        A            G         P  RW  P
Sbjct: 191 LIHTDM-------TAPVKEKYDELIAAGLV-------PIRRWGQP 221

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 81.8 bits (202), Expect = 7e-19
 Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 7/173 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA-FPNVQTVQVDLQDWARTRAAVSKV-- 79
           GIG      L      +   ++ +A L +        V  +  D++D A  R AV  +  
Sbjct: 11  GIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLGLAGDVRDEADVRRAVDAMEE 70

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G +D L+NNA V       ++  E     +      A   I +     +   +  G+I
Sbjct: 71  AFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAPALLR--RGGGTI 128

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
           VNV S+AGK A +G   Y+ASK  L  ++    L+L   NIRV +V P  V T
Sbjct: 129 VNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMPGSVDT 181

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 82.0 bits (203), Expect = 7e-19
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 15/151 (9%)

Query: 36  EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFD 95
           + I  A  K  AN DS++     V+T             A+   G VD+L+NNA + R  
Sbjct: 56  DEIKAAGGKAVANYDSVEDGEKIVKT-------------AIDAFGRVDILVNNAGILRDR 102

Query: 96  RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIY 155
            F  + EE+  D +  V++K    +++     M   K  G I+N SS AG     G   Y
Sbjct: 103 SFAKMSEEDW-DLVMRVHLKGSFKVTRAAWPYMRKQK-FGRIINTSSAAGLYGNFGQANY 160

Query: 156 SASKAALDSITRTMALELGPYNIRVNSVQPT 186
           SA+K  L  ++ T+A+E   YNI  N++ P 
Sbjct: 161 SAAKLGLLGLSNTLAIEGAKYNITCNTIAPA 191

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 82.1 bits (203), Expect = 7e-19
 Identities = 51/177 (28%), Positives = 91/177 (51%), Gaps = 11/177 (6%)

Query: 23  GIGRCIVEKLSQ---HEAIIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG+ I  +L++     A+  A S+  A    + ++        V+ ++ D  + +   +
Sbjct: 15  GIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFA 74

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           ++    G +DV +NNAA       +++ EE+  D   ++N KA++  +Q  +K M     
Sbjct: 75  QIDEEFGRLDVFVNNAASGVLRPAMEL-EESHWDWTMNINAKALLFCAQEAAKLMEKVG- 132

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            G I+++SS+     LE +T    SKAAL+++TR +A+EL P  I VN+V    V T
Sbjct: 133 GGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDT 189

Length = 250

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 81.9 bits (202), Expect = 8e-19
 Identities = 54/204 (26%), Positives = 87/204 (42%), Gaps = 14/204 (6%)

Query: 23  GIGRCIVEKLSQHEAII----IALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG     + ++  A +    +     +     ++    N Q    D+ D      AV+ 
Sbjct: 14  GIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAA 73

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                GPVDVL+NNA   +F  F    E  L + +  +N+   +++   V   M++    
Sbjct: 74  AEQALGPVDVLVNNAGWDKFGPFTKT-EPPLWERLIAINLTGALHMHHAVLPGMVERG-A 131

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM-- 192
           G IVN++S A +    G  +Y+A K  L + ++TMA E   + I VN V P    T +  
Sbjct: 132 GRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLD 191

Query: 193 -GRTGWSDPAKAGPMLAKT-PLGR 214
               G  +P K      +  PLGR
Sbjct: 192 DICGGAENPEKLREAFTRAIPLGR 215

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 82.0 bits (202), Expect = 9e-19
 Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 23/185 (12%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN-VQTVQVDLQDWARTRAAVSKV-- 79
           GIG+ I   L+Q  A      K   N +S K+A  N V  +  +  D    +A VSKV  
Sbjct: 17  GIGKAITVALAQEGA------KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVED 70

Query: 80  ------------GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT 127
                       G VD+L+NNA + R   F  ++ E+  + + DVN+ +V N +  V   
Sbjct: 71  ANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDW-ERVIDVNLSSVFNTTSAVLPY 129

Query: 128 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
           + + + +G I+++SSI G+    G T YSA+KA +   T+++ALEL   N+ VN++ P  
Sbjct: 130 ITEAE-EGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGF 188

Query: 188 VMTQM 192
           + T+M
Sbjct: 189 IDTEM 193

Length = 247

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 81.5 bits (202), Expect = 1e-18
 Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 10/176 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN----VQTVQVDLQDWARTRAAV-- 76
           GIG+      ++    +  ++++Q  L++L     +         +DL +       +  
Sbjct: 17  GIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAE 76

Query: 77  --SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
              + G  DVLINNA +A     L++   +    +  +N+ +V      V   M   +  
Sbjct: 77  LLEQFGCPDVLINNAGMAYTGPLLEMPLSDW-QWVIQLNLTSVFQCCSAVLPGMRA-RGG 134

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
           G I+NVSSIA + A      Y  SKAAL + T+ +A E   + IRV ++    V T
Sbjct: 135 GLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNT 190

Length = 241

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 81.7 bits (202), Expect = 1e-18
 Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 19/205 (9%)

Query: 23  GIGRCIVEKLSQHEAII----IALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRA---- 74
           GIG+   E L++  A +    I     +     +         VQVD+ D    +A    
Sbjct: 17  GIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADA 76

Query: 75  AVSKVGPVDVLINNAAV---ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
            VS  G +D L+NNAA+    + D  + +  +        VN+   +  ++ V K M   
Sbjct: 77  TVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYY-KKFMSVNLDGALVCTRAVYKHMAKR 135

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
              G+IVN SS A   A      Y  +K  L+ +T+ +A ELG  NIRVN++ P  + T+
Sbjct: 136 G-GGAIVNQSSTA---AWLYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTE 191

Query: 192 MGRTGWSDPAK-AGPMLAKTPLGRF 215
             RT    P +    M+   PL R 
Sbjct: 192 ATRT--VTPKEFVADMVKGIPLSRM 214

Length = 250

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 81.8 bits (202), Expect = 1e-18
 Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 14/191 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKT---QANLDSLKQAFPNVQTVQVDLQDWART----RAA 75
           GIGR + E+L+   A ++ + ++      L  +  A         DL+ +A      RAA
Sbjct: 15  GIGRGVAERLAGEGARVLLVDRSELVHEVLAEILAAGDAAHVHTADLETYAGAQGVVRAA 74

Query: 76  VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
           V + G VDVLINN     + +  +  EE  I++    ++   +   + V   M++ + QG
Sbjct: 75  VERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCCRAVLPHMLERQ-QG 133

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT 195
            IVNVSSIA +        YSA+K  ++++T ++A E     IRVN+V P        + 
Sbjct: 134 VIVNVSSIATRGIY--RIPYSAAKGGVNALTASLAFEHARDGIRVNAVAPGGTEAPPRKI 191

Query: 196 GWSDPAKAGPM 206
               P  A PM
Sbjct: 192 ----PRNAAPM 198

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 81.3 bits (201), Expect = 1e-18
 Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 12/185 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIG  IV +     A +        +             VQ D  D       V K G +
Sbjct: 17  GIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGAL 76

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+ NA +A F   L++D ++ ID +F +NI A  + S   ++ M +    G I+ + S
Sbjct: 77  DILVVNAGIAVFGDALELDADD-IDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGS 132

Query: 143 IAG-KTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPA 201
           + G +  + G   Y+ASK+AL  + R +A + GP  I +N VQP  + T        +PA
Sbjct: 133 VNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDA------NPA 186

Query: 202 KAGPM 206
             GPM
Sbjct: 187 N-GPM 190

Length = 237

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 81.9 bits (203), Expect = 1e-18
 Identities = 44/144 (30%), Positives = 72/144 (50%), Gaps = 22/144 (15%)

Query: 73  RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSI---FDVNIKAVINISQVVSKTMI 129
             A +  GP+DVL+NNA            EE+ +  +   F+VN+   + +++ V   M 
Sbjct: 70  ADAEATFGPIDVLVNNAGYGHEGAI----EESPLAEMRRQFEVNVFGAVAMTKAVLPGMR 125

Query: 130 DHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
             + +G IVN++S+ G   + G   Y  SK AL+ I+ ++A E+ P+ I V +V+P    
Sbjct: 126 ARR-RGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEP---- 180

Query: 190 TQMG--RTGWSDPAKAGPMLAKTP 211
              G  RT W     AG  + +TP
Sbjct: 181 ---GSFRTDW-----AGRSMVRTP 196

Length = 277

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 81.3 bits (201), Expect = 1e-18
 Identities = 54/205 (26%), Positives = 89/205 (43%), Gaps = 14/205 (6%)

Query: 23  GIGRCIVEKLSQ--HEAIIIALSKT--QANLDSLKQAFPN--VQTVQVDLQDWARTRAAV 76
           GIG  I  +      + +I+A          D L + FP   V  +  D+ D    R A+
Sbjct: 20  GIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAI 78

Query: 77  -----SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
                     + +L+NNA        +D  E+     IF+ N+ +   +S+     +  H
Sbjct: 79  LDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEW-RGIFETNLFSAFELSRYAHPLLKQH 137

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
               +IVN+ S++G T +     Y  +KAAL  +TR +A+E     IRVN+V P  + T 
Sbjct: 138 A-SSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTP 196

Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFA 216
           +     SDP     ++ +TP+ R  
Sbjct: 197 LTSGPLSDPDYYEQVIERTPMRRVG 221

Length = 257

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 80.5 bits (199), Expect = 3e-18
 Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 12/179 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLK----QAFPNVQTVQVDLQDWARTRAAVSK 78
           GIGR +  + ++    +   ++    LD LK       P+V+   +D+ D  R +  +++
Sbjct: 9   GIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEERNQLVIAE 68

Query: 79  ----VGPVDVLINNAAVARFDRFLDID-EENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
               +G +D++I NA V +     D+  +        D N+     I +           
Sbjct: 69  LEAELGGLDLVIINAGVGKGTSLGDLSFKAFR--ETIDTNLLGAAAILEAALPQFRAKG- 125

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           +G +V +SS+A    L G   YSASKAAL S+  ++  ++    IRV  + P  + T +
Sbjct: 126 RGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGFIDTPL 184

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 80.5 bits (199), Expect = 3e-18
 Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 19/209 (9%)

Query: 20  PKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPN----VQTVQVDLQDWARTRA 74
              G+G+     L++  A III    T  N D  ++        V  VQVDL        
Sbjct: 23  GNTGLGQGYAVALAKAGADIIITTHGT--NWDETRRLIEKEGRKVTFVQVDLTKPESAEK 80

Query: 75  AVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
            V +     G +D+L+NNA   R    L+  +E+  +++ D+N+ +V ++SQ V+K M  
Sbjct: 81  VVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDW-NAVMDINLNSVYHLSQAVAKVMAK 139

Query: 131 HKIQGSIVNVSSIAGKTALEGHTI---YSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
               G I+N++S+    + +G      Y+ASK  +  +T+  A EL  YNI+VN++ P  
Sbjct: 140 QG-SGKIINIASM---LSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGY 195

Query: 188 VMTQMGRTGWSDPAKAGPMLAKTPLGRFA 216
           + T       +D  +   +L + P GR+ 
Sbjct: 196 IKTANTAPIRADKNRNDEILKRIPAGRWG 224

Length = 258

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 80.7 bits (199), Expect = 3e-18
 Identities = 56/205 (27%), Positives = 98/205 (47%), Gaps = 22/205 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQ-------------TVQVDLQDW 69
           GIG+ I    +   A ++    +  N D+       +Q             T + +L   
Sbjct: 22  GIGKEIAITFATAGASVVV---SDINADAANHVVDEIQQLGGQAFACRCDITSEQELS-- 76

Query: 70  ARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMI 129
           A    A+SK+G VD+L+NNA       F D+   +   + +++N+ +  ++SQ+V+  M 
Sbjct: 77  ALADFALSKLGKVDILVNNAGGGGPKPF-DMPMADFRRA-YELNVFSFFHLSQLVAPEM- 133

Query: 130 DHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
           +    G I+ ++S+A +      T Y++SKAA   + R MA +LG  NIRVN + P  ++
Sbjct: 134 EKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAIL 193

Query: 190 TQMGRTGWSDPAKAGPMLAKTPLGR 214
           T   ++  + P     ML  TP+ R
Sbjct: 194 TDALKSVIT-PEIEQKMLQHTPIRR 217

Length = 255

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 80.1 bits (197), Expect = 4e-18
 Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 11/179 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIA-----LSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG  I ++L +    ++A       +    L+  K    +    + ++ DW  T+AA  
Sbjct: 14  GIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFD 73

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           KV    G +DVL+NNA + R   F  +  E+   ++ D N+ ++ N+++ V   M++   
Sbjct: 74  KVKAEVGEIDVLVNNAGITRDVVFRKMTREDW-TAVIDTNLTSLFNVTKQVIDGMVERGW 132

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            G I+N+SS+ G+    G T YS +KA +   T ++A E+    + VN+V P  + T M
Sbjct: 133 -GRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 190

Length = 246

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 80.0 bits (198), Expect = 7e-18
 Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 35/218 (16%)

Query: 23  GIGRCIVEKLSQHEA-IIIA---LSKTQANLDSLKQAFPN--VQTVQVDLQDWARTRAAV 76
           GIG+    +L++  A +IIA     K +     +K+   N  V+ +Q+DL   A  R   
Sbjct: 12  GIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLDLSSLASVRQFA 71

Query: 77  ----SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTM--ID 130
               ++   +D+LINNA +    R L  D     +  F VN    +    + +  +  + 
Sbjct: 72  EEFLARFPRLDILINNAGIMAPPRRLTKDG---FELQFAVN---YLGHFLLTNLLLPVLK 125

Query: 131 HKIQGSIVNVSSIAGKTA--------------LEGHTIYSASKAALDSITRTMALELGPY 176
                 IVNVSSIA +                   +  Y  SK A    TR +A  L   
Sbjct: 126 ASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFTRELARRLEGT 185

Query: 177 NIRVNSVQPTVVMTQMGRTGWSDPAK---AGPMLAKTP 211
            + VN++ P VV T++ R   S         P L K+P
Sbjct: 186 GVTVNALHPGVVRTELLRRNGSFFLLYKLLRPFLKKSP 223

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 79.3 bits (196), Expect = 8e-18
 Identities = 48/209 (22%), Positives = 92/209 (44%), Gaps = 19/209 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           G+G   VE+L    A ++ L    +  +++ +   N + V VD+      +AA++     
Sbjct: 13  GLGLATVERLLAQGAKVVILDLPNSPGETVAKLGDNCRFVPVDVTSEKDVKAALALAKAK 72

Query: 80  -GPVDVLINNAAVARFDRFLDIDEEN-----LIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            G +D+++N A +A   +  +   +      L   + +VN+    N+ ++ +  M  ++ 
Sbjct: 73  FGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTFNVIRLAAGAMGKNEP 132

Query: 134 Q-----GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
                 G I+N +S+A      G   YSASK  +  +T  +A +L P  IRV ++ P + 
Sbjct: 133 DQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDLAPQGIRVVTIAPGLF 192

Query: 189 MTQMGRTGWSDPAKAGPMLAKT--PLGRF 215
            T +   G  +  +    LAK      R 
Sbjct: 193 DTPLL-AGLPEKVRDF--LAKQVPFPSRL 218

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 79.3 bits (196), Expect = 9e-18
 Identities = 52/197 (26%), Positives = 91/197 (46%), Gaps = 17/197 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN----VQTVQVDLQD----WARTRA 74
           GIGR +  +L++  A ++  ++ +  L SL Q   +       V  D+ D         A
Sbjct: 12  GIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEA 71

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI- 133
           AV++ G +D+L+NNA +  + RF ++ + ++ + +  VN       +   +   + H   
Sbjct: 72  AVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLG----AVYCTHAALPHLKA 127

Query: 134 -QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            +G IV VSS+AG T +   + Y+ASK AL     ++ +EL    + V  V P  V T +
Sbjct: 128 SRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDI 187

Query: 193 GRTGWS---DPAKAGPM 206
            +        P    PM
Sbjct: 188 RKRALDGDGKPLGKSPM 204

Length = 263

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 79.1 bits (195), Expect = 9e-18
 Identities = 43/141 (30%), Positives = 79/141 (56%), Gaps = 1/141 (0%)

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           AV++ G +D+L+NNA + R +  ++  E++  D + ++NIK+V  +SQ  +K  I     
Sbjct: 79  AVAEFGHIDILVNNAGLIRREDAIEFSEKDW-DDVMNLNIKSVFFMSQAAAKHFIAQGNG 137

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G I+N++S+           Y+ASK+ +  +TR MA E   +NI VN++ P  + T   +
Sbjct: 138 GKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQ 197

Query: 195 TGWSDPAKAGPMLAKTPLGRF 215
              +D  ++  +L + P GR+
Sbjct: 198 QLRADEQRSAEILDRIPAGRW 218

Length = 253

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 78.9 bits (195), Expect = 1e-17
 Identities = 55/197 (27%), Positives = 82/197 (41%), Gaps = 14/197 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIG           A +  + K      S      N   +Q+DL D          V  V
Sbjct: 16  GIGLAQARAFLAQGAQVYGVDKQDKPDLS-----GNFHFLQLDLSD--DLEPLFDWVPSV 68

Query: 83  DVLINNAAVARFDRF---LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVN 139
           D+L N A +   D +   LD   E     IFD N+ +   +++     M++ K  G I+N
Sbjct: 69  DILCNTAGI--LDDYKPLLDTSLE-EWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIIN 124

Query: 140 VSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD 199
           + SIA   A  G   Y+ASK AL   T+ +AL+     I+V  + P  V T M    +  
Sbjct: 125 MCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP 184

Query: 200 PAKAGPMLAKTPLGRFA 216
              A  +  +TP+ R+A
Sbjct: 185 GGLADWVARETPIKRWA 201

Length = 235

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 78.9 bits (195), Expect = 1e-17
 Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 24/213 (11%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           G+GR +VE+     A +  L ++   +  L+  F   V  V+ D++  A    AV++   
Sbjct: 15  GLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEGDVRSLADNERAVARCVE 74

Query: 80  --GPVDVLINNAAVARFDRFLDIDE------ENLIDSIFDVNIKAVINISQVVSKTMIDH 131
             G +D  I NA +  +D    + +      +   D +F +N+K  I  ++     +   
Sbjct: 75  RFGKLDCFIGNAGI--WDYSTSLVDIPEEKLDEAFDELFHINVKGYILGAKAALPALY-- 130

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
             +GS++   S AG     G  +Y+ASK A+  + + +A EL P+ IRVN V P  ++T 
Sbjct: 131 ATEGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPH-IRVNGVAPGGMVTD 189

Query: 192 --------MGRTGWSDPAKAGPMLAKTPLGRFA 216
                    G T  S P     + +  PLG   
Sbjct: 190 LRGPASLGQGETSISTPPLDDMLKSILPLGFAP 222

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 79.0 bits (195), Expect = 1e-17
 Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 9/178 (5%)

Query: 23  GIGRCIVEKLSQHE-AIIIA---LSKTQANLDSLKQAFPNVQTVQVDLQD----WARTRA 74
           GIG  I ++L +    + I        QA  D L +       V+ D+ D    +A  R 
Sbjct: 13  GIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQ 72

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
            V   G ++V++NNA VA       I EE   D ++++N+  VI   Q   +        
Sbjct: 73  VVDTFGDLNVVVNNAGVAPTTPIETITEE-QFDKVYNINVGGVIWGIQAAQEAFKKLGHG 131

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           G I+N +S AG        +YS++K A+  +T+T A +L    I VN+  P +V T M
Sbjct: 132 GKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPM 189

Length = 256

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 78.8 bits (194), Expect = 1e-17
 Identities = 62/201 (30%), Positives = 104/201 (51%), Gaps = 12/201 (5%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKT---QANLDSLKQAFPNVQTVQVD---LQDWAR-TRA 74
           GIG+ I   L++  A ++IA  K+   +A   +++QA      ++ +    QD     +A
Sbjct: 10  GIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSEQDLEAVVKA 69

Query: 75  AVSKVGPVDVLINNAAVARFDRF-LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            VS+ G + +L+NNA       F + + EE+     F +N+ +   +SQ+ +  M     
Sbjct: 70  TVSQFGGITILVNNAGGGGPKPFDMPMTEEDFE-WAFKLNLFSAFRLSQLCAPHMQKAG- 127

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G+I+N+SS++ +        Y +SKAA++ +TR +A +LGP  IRVN+V P  V T   
Sbjct: 128 GGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAPGAVKTDAL 187

Query: 194 RTGWSDPAKAGPMLAKTPLGR 214
            +  + P     ML  TPLGR
Sbjct: 188 ASVLT-PEIERAMLKHTPLGR 207

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 78.8 bits (194), Expect = 1e-17
 Identities = 58/215 (26%), Positives = 104/215 (48%), Gaps = 19/215 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALS-----KTQANLDSLKQAFPNVQTVQVDLQDWARTRA-AV 76
           G+G+ +   L++  A I+ +      +TQA +++L + F  +    +  +D     + AV
Sbjct: 19  GLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAV 78

Query: 77  SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
             +G +D+LINNA + R    L+   ++  D + ++N K V  +SQ V+K  +     G 
Sbjct: 79  EVMGHIDILINNAGIIRRQDLLEFGNKDW-DDVININQKTVFFLSQAVAKQFVKQGNGGK 137

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG 196
           I+N++S+           Y+ASK+A+  +TR +A EL  YNI VN++ P  + T      
Sbjct: 138 IINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL 197

Query: 197 WSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS 231
            +D A+   +L + P             +RW  P 
Sbjct: 198 RADTARNEAILERIPA------------SRWGTPD 220

Length = 251

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 77.2 bits (191), Expect = 2e-17
 Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 22/172 (12%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
            IG  + + LS H   +I   ++                 QVD+ D A  +A   KVG  
Sbjct: 9   TIGLAVAQLLSAHGHEVITAGRSSG-------------DYQVDITDEASIKALFEKVGHF 55

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAV--INISQVVSKTMIDHKIQGSIVNV 140
           D +++ A  A F    ++ + +    +     K +  IN+ +     + D    GSI   
Sbjct: 56  DAIVSTAGDAEFAPLAELTDADFQRGLNS---KLLGQINLVRHGLPYLNDG---GSITLT 109

Query: 141 SSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           S I  +  + G    +    AL+   R  A+EL P  IR+N+V P VV   +
Sbjct: 110 SGILAQRPIPGGAAAATVNGALEGFVRAAAIEL-PRGIRINAVSPGVVEESL 160

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 78.3 bits (193), Expect = 2e-17
 Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 22/215 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL-----KQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG  +   L QH   ++  ++    +++L        +P +   Q DL +  +  +  S
Sbjct: 17  GIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQCDLSNEEQILSMFS 76

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            +      VDV INNA +AR +  L    E     +FDVN+ A+   ++   ++M +  +
Sbjct: 77  AIRTQHQGVDVCINNAGLARPEPLLSGKTEG-WKEMFDVNVLALSICTREAYQSMKERNV 135

Query: 134 -QGSIVNVSSIAGKTALEGHT--IYSASKAALDSITRTMALEL--GPYNIRVNSVQPTVV 188
             G I+N++S++G           Y+A+K A+ ++T  +  EL     +IR  S+ P +V
Sbjct: 136 DDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELREAKTHIRATSISPGLV 195

Query: 189 MTQMG-RTGWSDPAKAGPMLAKTPLGRFAGKLKPK 222
            T+   +   +DP KA       P       LKP+
Sbjct: 196 ETEFAFKLHDNDPEKAAATYESIP------CLKPE 224

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 78.2 bits (193), Expect = 2e-17
 Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 43/219 (19%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ---AFP-NVQTVQVDLQDWARTRAAV-- 76
           G+G+ + ++ ++  A ++   +T+  L+  K     FP  V TVQ+D+++    +  V  
Sbjct: 12  GMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQ 71

Query: 77  --SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNI---KAVINI--------SQV 123
              K G +D LINNAA             N I    D+++    +VI+I        SQ 
Sbjct: 72  IDEKFGRIDALINNAA------------GNFICPAEDLSVNGWNSVIDIVLNGTFYCSQA 119

Query: 124 VSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS-KAALDSITRTMALELG-PYNIRVN 181
           V K  I+  I+G+I+N+ +     A  G  I+SA+ KA + ++TRT+A+E G  Y IRVN
Sbjct: 120 VGKYWIEKGIKGNIINMVATYAWDAGPG-VIHSAAAKAGVLAMTRTLAVEWGRKYGIRVN 178

Query: 182 SVQPTVVMTQMGRTG-----WSDPAKAGPMLAKTPLGRF 215
           ++ P  +     RTG     W     A   +   PLGR 
Sbjct: 179 AIAPGPI----ERTGGADKLWESEEAAKRTIQSVPLGRL 213

Length = 252

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 77.8 bits (192), Expect = 3e-17
 Identities = 43/141 (30%), Positives = 70/141 (49%), Gaps = 7/141 (4%)

Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           A   ++G   +LINNAA +   R  ++  E L D  + VN++A + +S   +K   D K 
Sbjct: 88  AVSERLGDPSILINNAAYSTHTRLEELTAEQL-DKHYAVNVRATMLLSSAFAKQY-DGKA 145

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N++S      +     Y+A+K A+++ T+++A EL    I VN+V P        
Sbjct: 146 GGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPT----- 200

Query: 194 RTGWSDPAKAGPMLAKTPLGR 214
            TGW        ++ K P GR
Sbjct: 201 DTGWITEELKHHLVPKFPQGR 221

Length = 256

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 77.4 bits (191), Expect = 4e-17
 Identities = 49/183 (26%), Positives = 85/183 (46%), Gaps = 14/183 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKT--QANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV- 79
           G+G  I  +L +    +I++S+T  +      +Q   N+    +DLQD        +++ 
Sbjct: 12  GLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEIL 71

Query: 80  GPVDV-------LINNAA-VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
             +         LINNA  VA        + E LI ++  +N+ A + ++    K   D 
Sbjct: 72  SSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNV-HLNLLAPMILTSTFMKHTKDW 130

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALE--LGPYNIRVNSVQPTVVM 189
           K+   ++N+SS A K    G + Y +SKA LD  T+T+A E     Y +++ +  P V+ 
Sbjct: 131 KVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMD 190

Query: 190 TQM 192
           T M
Sbjct: 191 TNM 193

Length = 251

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 77.1 bits (190), Expect = 5e-17
 Identities = 42/180 (23%), Positives = 80/180 (44%), Gaps = 8/180 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG  + ++  +    +I   + +  L   K   P + T   D+ D    R  V  +   
Sbjct: 16  GIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKE 75

Query: 80  -GPVDVLINNAAVARFDRFLDIDE--ENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
              ++VLINNA + R +     ++  ++    I   N+ A I ++ ++   ++    + +
Sbjct: 76  YPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEI-ATNLLAPIRLTALLLPHLLRQP-EAT 133

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG 196
           I+NVSS      +    +Y A+KAA+ S T  +  +L   ++ V  + P +V T  G T 
Sbjct: 134 IINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTTEGNTQ 193

Length = 245

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 77.6 bits (191), Expect = 5e-17
 Identities = 62/181 (34%), Positives = 90/181 (49%), Gaps = 15/181 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANL-----DSLKQAFPNVQTVQVDL---QDWART-R 73
           GIG  IV    +H A +  +   Q +L     DSL    PNV     D+    D +R   
Sbjct: 29  GIGESIVRLFHKHGAKV-CIVDLQDDLGQNVCDSLGGE-PNVCFFHCDVTVEDDVSRAVD 86

Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLID--SIFDVNIKAVINISQVVSKTMIDH 131
             V K G +D+++NNA +       DI    L +   +FDVN+K V    +  ++ MI  
Sbjct: 87  FTVDKFGTLDIMVNNAGLTG-PPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL 145

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
           K +GSIV++ S+A      G   Y+ SK A+  +TR++A ELG + IRVN V P  V T 
Sbjct: 146 K-KGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTA 204

Query: 192 M 192
           +
Sbjct: 205 L 205

Length = 280

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 77.4 bits (191), Expect = 5e-17
 Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 11/170 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSK--- 78
           G GR   E   +    ++A ++  A L  L + +   +  + +D+ D A   AAV     
Sbjct: 14  GFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVE 73

Query: 79  -VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS- 136
             G +D+++NNA    F    ++ E     +  D N    + ++Q V   +   + Q S 
Sbjct: 74  HFGRLDIVVNNAGYGLFGMIEEVTESE-ARAQIDTNFFGALWVTQAVLPYL---REQRSG 129

Query: 137 -IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
            I+ +SSI G +A     IY ASK AL+ ++  +A E+  + I+V  V+P
Sbjct: 130 HIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEP 179

Length = 275

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 77.2 bits (190), Expect = 6e-17
 Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 19/211 (9%)

Query: 23  GIGRCIVEKLSQ--HEAIIIALS--KTQANLDSLKQAFPNVQTVQVDLQDWARTRA---- 74
           GIG  I  +L +      + A         +  L++A         D++      A    
Sbjct: 14  GIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSVPEIEALVAA 73

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINIS-QVVSKTMIDHKI 133
           AV++ GP+DVL+NNA  +      ++ +E L   + + N+  V  ++ +V+    +  + 
Sbjct: 74  AVARYGPIDVLVNNAGRSGGGATAELADE-LWLDVVETNLTGVFRVTKEVLKAGGMLERG 132

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N++S  GK  +     YSASK  +   T+ + LEL    I VN+V P  V T M 
Sbjct: 133 TGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA 192

Query: 194 ---RTGWSDPAKAGP------MLAKTPLGRF 215
              R  ++D  +         + A+ PLGR+
Sbjct: 193 ASVREHYADIWEVSTEEAFDRITARVPLGRY 223

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 76.6 bits (189), Expect = 8e-17
 Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 12/143 (8%)

Query: 82  VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS 141
           VDVL+NNA +      +DI  E + +  F+ N+   + ++Q   + M+    +G +V  S
Sbjct: 74  VDVLLNNAGIGEAGAVVDIPVELVREL-FETNVFGPLELTQGFVRKMVARG-KGKVVFTS 131

Query: 142 SIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG----- 196
           S+AG         Y ASK AL++I   M  EL P+ I+V +V P   +T    T      
Sbjct: 132 SMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPK 191

Query: 197 -WSDPAKA---GPMLAKTPLGRF 215
            W DPA+       LA  PL +F
Sbjct: 192 RWYDPARNFTDPEDLA-FPLEQF 213

Length = 257

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 76.1 bits (187), Expect = 1e-16
 Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 11/198 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQA-NLDSLKQAFPN-VQTVQVDLQDWARTRA----AV 76
           GIG  I   L    AI+  L  T+   L++L       V+    +L D    +A    A 
Sbjct: 17  GIGEEIARLLHAQGAIV-GLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAE 75

Query: 77  SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
           + +  VD+L+NNA + +   F+ + +E+  DS+ +VN+ A   +++ ++  M+  +  G 
Sbjct: 76  ADLEGVDILVNNAGITKDGLFVRMSDEDW-DSVLEVNLTATFRLTRELTHPMMRRR-YGR 133

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG 196
           I+N++S+ G T   G   Y ASKA +   ++++A E+   N+ VN V P  + + M  TG
Sbjct: 134 IINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAM--TG 191

Query: 197 WSDPAKAGPMLAKTPLGR 214
             +  +   ++   P+ R
Sbjct: 192 KLNDKQKEAIMGAIPMKR 209

Length = 245

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 75.9 bits (187), Expect = 2e-16
 Identities = 48/201 (23%), Positives = 98/201 (48%), Gaps = 10/201 (4%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQAN----LDSLKQAFPNVQTVQVDLQDWART----R 73
           G+GR +  +  + +A ++I     +       + +K+A      V+ D+   +      +
Sbjct: 18  GLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQ 77

Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            AV + G +DV+INNA +       ++  E+  + + + N+      S+   K  ++H I
Sbjct: 78  TAVKEFGTLDVMINNAGIENAVPSHEMSLEDW-NKVINTNLTGAFLGSREAIKYFVEHDI 136

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           +G+I+N+SS+  +        Y+ASK  +  +T T+A+E  P  IRVN++ P  + T + 
Sbjct: 137 KGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPIN 196

Query: 194 RTGWSDPAKAGPMLAKTPLGR 214
              ++DP +   + +  P+G 
Sbjct: 197 AEKFADPKQRADVESMIPMGY 217

Length = 261

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 75.9 bits (187), Expect = 2e-16
 Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 18/207 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVSK 78
           GIG  I +  ++  A I+     Q  +D    A+            D+ D    +A VS+
Sbjct: 21  GIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQ 80

Query: 79  ----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
               VG +D+L+NNA + +    L++  E+    I D+++ A   +S+ V  +MI  K  
Sbjct: 81  IEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVI-DIDLNAPFIVSKAVIPSMIK-KGH 138

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG- 193
           G I+N+ S+  +   E  + Y+A+K  L  +T+ +A E G  NI+ N + P  + T    
Sbjct: 139 GKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTA 198

Query: 194 --RTGWSDPAKAGPM----LAKTPLGR 214
             R   +D ++  P     +AKTP  R
Sbjct: 199 PLRELQADGSR-HPFDQFIIAKTPAAR 224

Length = 265

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 75.6 bits (186), Expect = 2e-16
 Identities = 51/145 (35%), Positives = 82/145 (56%), Gaps = 6/145 (4%)

Query: 74  AAVSKVGPVDVLINNAA-VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           A  S  G +D L+NNA  VA      D+D   L   +FD N+      ++  ++ +   +
Sbjct: 73  AVQSAFGRLDALVNNAGIVAPSMPLADMDAARL-RRMFDTNVLGAYLCAREAARRLSTDR 131

Query: 133 --IQGSIVNVSSIAGKTALEGHTI-YSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
               G+IVNVSSIA +       + Y+ SK A+D++T  +A ELGP+ +RVN+V+P ++ 
Sbjct: 132 GGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIE 191

Query: 190 TQMGRTGWSDPAKAGPMLAKTPLGR 214
           T++  +G   P +A  + A+TPLGR
Sbjct: 192 TEIHASG-GQPGRAARLGAQTPLGR 215

Length = 248

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 75.6 bits (186), Expect = 2e-16
 Identities = 43/150 (28%), Positives = 77/150 (51%), Gaps = 12/150 (8%)

Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
               ++G   +L+NNAA +  + F ++  E  +D  + VN++A   +S   ++   D K 
Sbjct: 89  KVTEQLGYPHILVNNAAYSTNNDFSNLTAE-ELDKHYMVNVRATTLLSSQFAR-GFDKKS 146

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N++S   +  + G   Y+A+K A+D++T ++A E+    I VN++ P        
Sbjct: 147 GGRIINMTSGQFQGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPT----- 201

Query: 194 RTGW-SDPAKAGPMLAKTPLGRFAGKLKPK 222
            TGW ++  K G +L   P GR     +PK
Sbjct: 202 DTGWMTEEIKQG-LLPMFPFGRIG---EPK 227

Length = 256

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 75.6 bits (186), Expect = 2e-16
 Identities = 62/207 (29%), Positives = 100/207 (48%), Gaps = 20/207 (9%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQ--AFPNVQTVQVDLQDWARTRAAVSKV 79
           GIGR I +   +  A +II+  K +A  D+ ++  A+     +  DL       A V++V
Sbjct: 17  GIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAIPADLSSEEGIEALVARV 76

Query: 80  GPV----DVLINNAAV---ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
                  DVL+NNA     A  + F     E+  D + D+N+K+V  ++Q +   +    
Sbjct: 77  AERSDRLDVLVNNAGATWGAPLEAF----PESGWDKVMDINVKSVFFLTQALLPLLRAAA 132

Query: 133 IQG---SIVNVSSIAG--KTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
                  ++N+ SIAG   + LE ++ Y ASKAA+  +TR +A EL   +I VN++ P  
Sbjct: 133 TAENPARVINIGSIAGIVVSGLENYS-YGASKAAVHQLTRKLAKELAGEHITVNAIAPGR 191

Query: 188 VMTQMGRTGWSDPAKAGPMLAKTPLGR 214
             ++M     +DPA         PLGR
Sbjct: 192 FPSKMTAFLLNDPAALEAEEKSIPLGR 218

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 75.3 bits (186), Expect = 2e-16
 Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 30/215 (13%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQD----WARTRAAVSK 78
           GIG   V +L +  A ++  ++++            V+ V  DL       A  RA + +
Sbjct: 20  GIGAATVARLLEAGARVVTTARSR-----PDDLPEGVEFVAADLTTAEGCAAVARAVLER 74

Query: 79  VGPVDVLINNA--AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
           +G VD+L++    + A    F  + +E   D   ++N+ A + + + +   MI     G 
Sbjct: 75  LGGVDILVHVLGGSSAPAGGFAALTDEEWQDE-LNLNLLAAVRLDRALLPGMIARG-SGV 132

Query: 137 IVNVSSIAGKTALEGHTI-YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT----- 190
           I++V+SI  +  L   T  Y+A+KAAL + +++++ E+ P  +RVN+V P  + T     
Sbjct: 133 IIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVA 192

Query: 191 -------QMGRTGWSDPAKAGPM--LAKTPLGRFA 216
                    G     + AK   M  L   PLGR A
Sbjct: 193 LAERLAEAAGTD--YEGAKQIIMDSLGGIPLGRPA 225

Length = 260

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 75.4 bits (186), Expect = 2e-16
 Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 14/145 (9%)

Query: 75  AVSKVGPVDVLINNAA--VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            V + G +D+L+NNAA    +     DI  E L +  F  NI ++  +++     +   K
Sbjct: 99  VVKEFGKLDILVNNAAYQHPQES-IEDITTEQL-EKTFRTNIFSMFYLTKAALPHL---K 153

Query: 133 IQGSIVNVSSIAGKTALEGHTI---YSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
              SI+N +S+   TA +G      Y+A+K A+ + TR ++L+L    IRVN+V P  + 
Sbjct: 154 KGSSIINTTSV---TAYKGSPHLLDYAATKGAIVAFTRGLSLQLAEKGIRVNAVAPGPIW 210

Query: 190 TQMGRTGWSDPAKAGPMLAKTPLGR 214
           T +         K     ++ P+GR
Sbjct: 211 TPL-IPSSFPEEKVSEFGSQVPMGR 234

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 75.3 bits (185), Expect = 3e-16
 Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 14/174 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAV----SK 78
           GIG+ +V +L +  + +I       N D  + ++ +V   +VD+ +  +    +    SK
Sbjct: 17  GIGKAVVNRLKEEGSNVI-------NFDIKEPSYNDVDYFKVDVSNKEQVIKGIDYVISK 69

Query: 79  VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            G +D+L+NNA +  +     ++E+   D I +VN+  +  +S+     M+    +G I+
Sbjct: 70  YGRIDILVNNAGIESYGAIHAVEEDEW-DRIINVNVNGIFLMSKYTIPYMLKQD-KGVII 127

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           N++S+           Y  SK A+  +TR++A++  P  IR  +V P  + T +
Sbjct: 128 NIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAP-TIRCVAVCPGSIRTPL 180

Length = 258

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 74.4 bits (183), Expect = 5e-16
 Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 3/123 (2%)

Query: 74  AAVSKVGPVDVLINNAAVARFD-RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            AV + G +D+L+NNA         +D D     D    +N++      +  +  MI   
Sbjct: 70  RAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVW-DQTMAINLRGTFLCCRHAAPRMIARG 128

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             GSIVN+SSIAG++   G+  Y ASKAA+ ++TRT+A EL    IR N++ P ++ T +
Sbjct: 129 -GGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNALAPGLIDTPL 187

Query: 193 GRT 195
              
Sbjct: 188 LLA 190

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 74.0 bits (182), Expect = 1e-15
 Identities = 59/214 (27%), Positives = 105/214 (49%), Gaps = 20/214 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIAL---SKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV 79
           GIG+     L+Q  A ++A+         +D +K      +   VD+ D  + +   S++
Sbjct: 17  GIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEI 76

Query: 80  ----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
               G VDVL NNA V      +     ++ D I  V+++    +++++   M++    G
Sbjct: 77  KEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG--G 134

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM--G 193
           SI+N SS +G+ A    + Y+A+K A+ + T+++A+E G   IR N++ P  + T +   
Sbjct: 135 SIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDK 194

Query: 194 RTGWSDPAKAGPMLAK-----TPLGRFAGKLKPK 222
            TG S+  +AG    +     TPLGR     KP+
Sbjct: 195 LTGTSED-EAGKTFRENQKWMTPLGRLG---KPE 224

Length = 272

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 73.7 bits (181), Expect = 1e-15
 Identities = 53/176 (30%), Positives = 92/176 (52%), Gaps = 8/176 (4%)

Query: 46  QANLDSLKQAFPNVQTVQVDLQDWA---RTRAAVSK-VGPVDVLINNAAVARFDRFLDID 101
           +A + ++++       V  D+ D A   R   AV + +G +D L+NNA +      L+  
Sbjct: 41  EAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQM 100

Query: 102 EENLIDSIFDVNI-KAVINISQVVSKTMIDHK-IQGSIVNVSSIAGKTALEGHTI-YSAS 158
           +   +  IF  N+  + +   + V +    H    G+IVNVSS+A +    G  I Y+AS
Sbjct: 101 DAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS 160

Query: 159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGR 214
           K A+D++T  +A E+    IRVN+V+P V+ T++  +G  +P +   + A  P+GR
Sbjct: 161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG-GEPGRVDRVKAGIPMGR 215

Length = 248

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 73.0 bits (180), Expect = 2e-15
 Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 20/202 (9%)

Query: 24  IGRCIVEKLSQHE---AIIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           IGR I   L+ H    A+    S+ +A      ++        +Q DL D A  RA V++
Sbjct: 21  IGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVAR 80

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                GP+ +L+NNA++  +D        +  D     N++A   ++Q  ++ +     +
Sbjct: 81  ASAALGPITLLVNNASLFEYDSAASFTRASW-DRHMATNLRAPFVLAQAFARALPADA-R 138

Query: 135 GSIVNVSSIAGKT-ALEGHTI-YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           G +VN+  I  +   L    + Y+ SKAAL + TRT+A  L P  IRVN++ P   +   
Sbjct: 139 GLVVNM--IDQRVWNLNPDFLSYTLSKAALWTATRTLAQALAP-RIRVNAIGPGPTL-PS 194

Query: 193 GRTGWSDPAKAGPMLAKTPLGR 214
           GR    D A+     A TPLGR
Sbjct: 195 GRQSPEDFARQ---HAATPLGR 213

Length = 258

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 74.9 bits (184), Expect = 2e-15
 Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 13/208 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN------VQTVQVDLQDWARTRAAV 76
           GIGR    +L+   A ++         +++               +++D+ D    +AA 
Sbjct: 425 GIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAF 484

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           + V    G VD+++NNA +A    F +   +       D+       +++   + M +  
Sbjct: 485 ADVALAYGGVDIVVNNAGIATSSPFEETTLQEW-QLNLDILATGYFLVAREAFRQMREQG 543

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM--T 190
           + G+IV ++S     A +  + YSA+KAA   + R +A E G Y IRVN+V P  V+  +
Sbjct: 544 LGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGS 603

Query: 191 QMGRTGWSDPAKAGPMLAKTPLGRFAGK 218
            +    W +   A   +    L     K
Sbjct: 604 GIWDGEWREERAAAYGIPADELEEHYAK 631

Length = 676

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 73.3 bits (180), Expect = 2e-15
 Identities = 47/177 (26%), Positives = 86/177 (48%), Gaps = 9/177 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAA----VSK 78
           GIGR + +        + A ++   ++++L  A      VQ+D+ D A          ++
Sbjct: 12  GIGRALADAFKAAGYEVWATARKAEDVEALAAA--GFTAVQLDVNDGAALARLAEELEAE 69

Query: 79  VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            G +DVLINNA        LD   E +    F+ N+ AV+ +++ +   +   + +G +V
Sbjct: 70  HGGLDVLINNAGYGAMGPLLDGGVEAMRRQ-FETNVFAVVGVTRALFPLL--RRSRGLVV 126

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT 195
           N+ S++G         Y ASKAA+ +++  + LEL P+ ++V  VQP  + +Q    
Sbjct: 127 NIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASN 183

Length = 274

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 72.5 bits (178), Expect = 2e-15
 Identities = 42/144 (29%), Positives = 65/144 (45%), Gaps = 11/144 (7%)

Query: 80  GPVDVLINNAAVA-RFD-----RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           GPVD ++NNA +   FD      F  ID E+      +  +K  +N+ Q V     +   
Sbjct: 74  GPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQ-LEGAVKGALNLLQAVLPDFKERG- 131

Query: 134 QGSIVNVSS-IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            G ++N+ + +     +  H  Y+ +KAAL   TR MA ELGPY I VN V   ++    
Sbjct: 132 SGRVINIGTNLFQNPVVPYHD-YTTAKAALLGFTRNMAKELGPYGITVNMVSGGLLKVT- 189

Query: 193 GRTGWSDPAKAGPMLAKTPLGRFA 216
             +  +       +   TPLG+  
Sbjct: 190 DASAATPKEVFDAIAQTTPLGKVT 213

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 72.2 bits (178), Expect = 3e-15
 Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 75  AVSKVGPVDVLINNAAVARFDR----FLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
                G +D L+++ A++   R    +LD   E  + ++ D++  + I++++     M  
Sbjct: 66  VKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKAL-DISAYSFISLAKAAKPLM-- 122

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
               GSIV +S IA +    G+     +KAAL+S+ R +A ELG   IRVN++      T
Sbjct: 123 -NEGGSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRVNTISAGPTKT 181

Length = 239

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 72.5 bits (178), Expect = 3e-15
 Identities = 49/180 (27%), Positives = 84/180 (46%), Gaps = 24/180 (13%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKVGP 81
           G G CI  +  Q    +IA  + Q  L  LK     N+   Q+D+    R RAA+ ++  
Sbjct: 11  GFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDV----RNRAAIEEMLA 66

Query: 82  --------VDVLINNAAVA-----RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTM 128
                   +DVL+NNA +A          ++ D E +ID+    N K ++ +++ V   M
Sbjct: 67  SLPAEWRNIDVLVNNAGLALGLEPAHKASVE-DWETMIDT----NNKGLVYMTRAVLPGM 121

Query: 129 IDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
           ++    G I+N+ S AG     G  +Y A+KA +   +  +  +L    +RV  ++P +V
Sbjct: 122 VERNH-GHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLV 180

Length = 248

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 72.4 bits (178), Expect = 3e-15
 Identities = 41/130 (31%), Positives = 67/130 (51%), Gaps = 5/130 (3%)

Query: 60  QTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVIN 119
              QVD    A   AAV ++G +DVL+NNA +      +D+ ++     + DV +     
Sbjct: 80  SEAQVD----ALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEW-SRVLDVTLTGTFR 134

Query: 120 ISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIR 179
            ++   + M      G IVN +S+ G  A  G   Y+A+KA + ++TR  ALE   Y +R
Sbjct: 135 ATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVR 194

Query: 180 VNSVQPTVVM 189
           +N+V P++ M
Sbjct: 195 INAVAPSIAM 204

Length = 262

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 72.2 bits (178), Expect = 4e-15
 Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 20/179 (11%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIGR   EKL++    +   S+  A    +    P V+ +++D+ D A  +AAV +V   
Sbjct: 15  GIGRATAEKLARAGYRVFGTSRNPARAAPI----PGVELLELDVTDDASVQAAVDEVIAR 70

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLID---SIFDVNIKAVINISQVVSKTMIDHKIQG 135
            G +DVL+NNA V          EE+ I    ++FD N+  ++ +++ V   M   + QG
Sbjct: 71  AGRIDVLVNNAGVG----LAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHM---RAQG 123

Query: 136 S--IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           S  I+N+SS+ G        +Y+ASK A++  + ++  E+  + IRV+ V+P    T  
Sbjct: 124 SGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNF 182

Length = 270

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 72.0 bits (177), Expect = 5e-15
 Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 12/148 (8%)

Query: 46  QANLDSLKQAF---PNVQTVQVDLQDWA---RTRAAVSKVGPVDVLINNA--AVARFDRF 97
           Q NL S         N++  Q+D+ D       +  + ++G +D+L+NNA  A   F   
Sbjct: 40  QENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRIDLLVNNAGYANGGFVEE 99

Query: 98  LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSA 157
           + ++E       F+ N+   I+++Q V   M   K  G I+N+SSI+G+    G + Y +
Sbjct: 100 IPVEE---YRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGFPGLSPYVS 155

Query: 158 SKAALDSITRTMALELGPYNIRVNSVQP 185
           SK AL+  + ++ LEL P+ I V  ++P
Sbjct: 156 SKYALEGFSESLRLELKPFGIDVALIEP 183

Length = 280

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 71.5 bits (176), Expect = 5e-15
 Identities = 55/222 (24%), Positives = 89/222 (40%), Gaps = 42/222 (18%)

Query: 23  GIGRCIVEKLSQHEA-IIIA---LSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG  I   L++  A ++IA        A  ++L++A      V +D+ D     A +  
Sbjct: 15  GIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDY 74

Query: 79  V----GPVDVLINNA-----------AVARFDRFLDIDEENLIDSIFDVNIKAVINISQV 123
                G VD+L+NNA              ++ + + I    L D  F +  KA +     
Sbjct: 75  AVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAI---ML-DGAF-LTTKAAL----- 124

Query: 124 VSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSV 183
               M      G I+N++S+ G     G   Y ++K  L  +T+ +ALE   + + VN++
Sbjct: 125 --PIMKAQG-GGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAI 181

Query: 184 QPTVVMTQMGRTGWSDPAKAGP----------MLAKTPLGRF 215
            P  V T + R    D AK             +L   P  RF
Sbjct: 182 CPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRF 223

Length = 258

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 71.4 bits (175), Expect = 6e-15
 Identities = 53/206 (25%), Positives = 100/206 (48%), Gaps = 30/206 (14%)

Query: 36  EAIIIALSKTQANL--------DSLKQAFPNVQT-------VQVDLQDWARTRAAVSKV- 79
           + I I L++  A++        D L +   +++        +  D+   A  RAAV++  
Sbjct: 22  QRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTE 81

Query: 80  ---GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
              G + + +N A +A  +   +++EE    ++ D+N+  V    Q  ++ M+++   GS
Sbjct: 82  AELGALTLAVNAAGIANANPAEEMEEEQW-QTVMDINLTGVFLSCQAEARAMLENG-GGS 139

Query: 137 IVNVSSIAG----KTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           IVN++S++G    +  L+ H  Y+ASKA +  +++++A+E     IRVNS+ P    T M
Sbjct: 140 IVNIASMSGIIVNRGLLQAH--YNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPM 197

Query: 193 G-RTGWSDPAKAGPMLAKTPLGRFAG 217
             R       K      +TP+ R A 
Sbjct: 198 NTRPEMVHQTKL--FEEQTPMQRMAK 221

Length = 254

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 71.4 bits (175), Expect = 7e-15
 Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 19/210 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN------VQTVQVDLQDWARTRA-- 74
           G+G     +L++  A +  +   +  L++ K A         V  ++ D+ D A+  A  
Sbjct: 14  GLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDEAQVEAYV 73

Query: 75  --AVSKVGPVDVLINNAAV-ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
              V + G +D   NNA +  + +   D   +   D +  +N++ V    + V K M + 
Sbjct: 74  DATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEF-DKVVSINLRGVFYGLEKVLKVMREQ 132

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
              G IVN +S+ G   +   + Y+A+K  +  +TR  A+E G Y IR+N++ P  ++T 
Sbjct: 133 GS-GMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINAIAPGAILTP 191

Query: 192 M-----GRTGWSDPAKAGPMLAK-TPLGRF 215
           M      + G  +P +AG       P+ RF
Sbjct: 192 MVEGSLKQLGPENPEEAGEEFVSVNPMKRF 221

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 71.2 bits (175), Expect = 8e-15
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 5/132 (3%)

Query: 58  NVQTVQVDLQDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVN 113
                  D        A    V    G VD+L+ NA +A+     D    +   S+  VN
Sbjct: 54  MAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSL-QVN 112

Query: 114 IKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL 173
           +      ++  S+ MI   IQG I+ ++S +GK   + ++ YSA+K     +T+++AL+L
Sbjct: 113 LVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDL 172

Query: 174 GPYNIRVNSVQP 185
             Y I V+S+  
Sbjct: 173 AEYGITVHSLML 184

Length = 259

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 71.4 bits (175), Expect = 8e-15
 Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 14/200 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV-- 79
           G+GR IV++     A +  L K+ A L  L+ A    V  V+ D++     + AV++   
Sbjct: 16  GLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVA 75

Query: 80  --GPVDVLINNAAVARFDRFL-DIDEENL---IDSIFDVNIKAVINISQVVSKTMIDHKI 133
             G +D LI NA +  +   L DI ++ +    D +F +N+K  +   +     ++  + 
Sbjct: 76  AFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASR- 134

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            GS++   S AG     G  +Y+A+K A+  + + +A EL PY +RVN V P  + + + 
Sbjct: 135 -GSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDL- 191

Query: 194 RTGWSDPAKAGPMLAKTPLG 213
             G      A   ++  PLG
Sbjct: 192 -RGPKSLGMADKSISTVPLG 210

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 70.2 bits (172), Expect = 1e-14
 Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 15/193 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF--PNVQTVQVDLQDWARTRAAVSKVG 80
           GIGR      +++   +      +  L +L       NV    +D+ D A   AA++   
Sbjct: 11  GIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGALDVTDRAAWAAALADFA 70

Query: 81  P-----VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
                 +D L NNA V R   F D+      D + D+N+K V+N     +         G
Sbjct: 71  AATGGRLDALFNNAGVGRGGPFEDVPLAA-HDRMVDINVKGVLN--GAYAALPYLKATPG 127

Query: 136 S-IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM-- 192
           + ++N +S +         +YSA+K A+  +T  + +E   + IRV  V P  V T +  
Sbjct: 128 ARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWPWFVDTPILT 187

Query: 193 -GRTGWSDPAKAG 204
            G TG + P K  
Sbjct: 188 KGETG-AAPKKGL 199

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 70.7 bits (174), Expect = 1e-14
 Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 19/182 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP--NVQTVQVDLQD---WARTRAAVS 77
           GIGR      +     + A    +A L +L       N  T  +D+ D   W    A  +
Sbjct: 12  GIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFA 71

Query: 78  KV--GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQV----VSKTMIDH 131
               G +DVL NNA + R   F DI  E   D + D+N+K V+N +      +  T    
Sbjct: 72  AATGGRLDVLFNNAGILRGGPFEDIPLEA-HDRVIDINVKGVLNGAHAALPYLKAT---- 126

Query: 132 KIQGS-IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
              G+ ++N SS +      G  +YSA+K A+  +T  + LE   + IRV  V P  V T
Sbjct: 127 --PGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDT 184

Query: 191 QM 192
            M
Sbjct: 185 AM 186

Length = 260

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 70.8 bits (174), Expect = 1e-14
 Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 8/152 (5%)

Query: 65  DLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVV 124
            L   A+  A   K G +DV++NNA VA    F ++  E+  D    +N+  V+   +  
Sbjct: 63  QLTALAQ--ACEEKWGGIDVIVNNAGVASGGFFEELSLEDW-DWQIAINLMGVVKGCKAF 119

Query: 125 SKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQ 184
                  K  G IVN++S+AG       + Y+ +KA + +++ T+ +EL    I V+ V 
Sbjct: 120 LPLFKRQK-SGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVC 178

Query: 185 PTVVMTQMGRTGWS-DPA-KA--GPMLAKTPL 212
           P+   T +  +    +PA KA  G +L K+P+
Sbjct: 179 PSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPI 210

Length = 270

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 70.0 bits (172), Expect = 2e-14
 Identities = 50/177 (28%), Positives = 74/177 (41%), Gaps = 14/177 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTV---QVDLQDWARTRAAV--- 76
           GIG  I E L      +   ++ Q  L+       N   V     D++D A  + AV   
Sbjct: 17  GIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAI 76

Query: 77  -SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID--HKI 133
            +  G +DVLI NA V  F    ++  E     I D N+           K  +    + 
Sbjct: 77  VAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVI-DTNLTGAF----YTIKAAVPALKRG 131

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            G I+N+SS+AG     G   Y+ASK  L   +    L+L  Y I+V+++ P  V T
Sbjct: 132 GGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVAT 188

Length = 237

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 70.1 bits (172), Expect = 2e-14
 Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 15/181 (8%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQ----------AFPNVQTVQVDLQDWAR 71
           G+GR I  ++++  A + +      A LD+             AF  VQ V  + Q  A 
Sbjct: 10  GLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQAL 69

Query: 72  TRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
              A   +G + VL+NNA V  F     I+ +     +  +N++++    +     +   
Sbjct: 70  LAQAADAMGGLSVLVNNAGVGSFGAIEQIELD-EWRRVMAINVESIFLGCKHALPYLRAS 128

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP--YNIRVNSVQPTVVM 189
           +   SIVN+SS+A   A   +T Y+ASKAA+ S+T+++AL+      ++R NS+ PT + 
Sbjct: 129 Q-PASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIR 187

Query: 190 T 190
           T
Sbjct: 188 T 188

Length = 251

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 70.7 bits (174), Expect = 3e-14
 Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 12/178 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL----KQAFPNVQTVQVDLQDWARTRAAVSK 78
           G+GR      ++  A ++ L++ +  L++L    + A      V  D+ D    +AA  +
Sbjct: 19  GVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADR 78

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                GP+D  +NNA V  F  F D+  E     + +V    V++ +    + M   + +
Sbjct: 79  AEEELGPIDTWVNNAMVTVFGPFEDVTPEE-FRRVTEVTYLGVVHGTLAALRHMRP-RDR 136

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL--GPYNIRVNSVQPTVVMT 190
           G+I+ V S     ++   + Y A+K A+   T ++  EL      + V  VQP  V T
Sbjct: 137 GAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNT 194

Length = 334

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 71.2 bits (175), Expect = 3e-14
 Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 9/181 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIA----LSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIGR      ++  A ++A     +  +   + ++ A       +VD+ D     A    
Sbjct: 326 GIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEW 385

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           V    G  D+++NNA +     FLD   E+  D + DVN+  VI+  ++  + M++    
Sbjct: 386 VRAEHGVPDIVVNNAGIGMAGGFLDTSAED-WDRVLDVNLWGVIHGCRLFGRQMVERGTG 444

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G IVNV+S A          Y+ SKAA+  ++  +  EL    I V ++ P  V T +  
Sbjct: 445 GHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVA 504

Query: 195 T 195
           T
Sbjct: 505 T 505

Length = 582

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 69.6 bits (171), Expect = 3e-14
 Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 13/202 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           GIG     +     A +    +  A+L++ +     +   ++ D  D A  +A    +  
Sbjct: 17  GIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAE 76

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G +D +  NA VA+F    D DE  + D  F+ N+K    + Q +   + +     SI
Sbjct: 77  AFGRLDAVFINAGVAKFAPLEDWDEA-MFDRSFNTNVKGPYFLIQALLPLLAN---PASI 132

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ-MGRTG 196
           V   SI     +   ++Y+ASKAAL S+ +T++ EL P  IRVN+V P  V T   G+ G
Sbjct: 133 VLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLG 192

Query: 197 WSD---PAKAGPMLAKTPLGRF 215
             +    A A  + A  PLGRF
Sbjct: 193 LPEATLDAVAAQIQALVPLGRF 214

Length = 249

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 69.6 bits (171), Expect = 3e-14
 Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 17/185 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG+    +L+     +   ++    ++ L      V  + +D+ D A  +AAV  +   
Sbjct: 14  GIGKATARRLAAQGYTVYGAARRVDKMEDLASL--GVHPLSLDVTDEASIKAAVDTIIAE 71

Query: 80  -GPVDVLINNAAVARFDRFLD--IDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
            G +DVL+NNA    +    D  IDE       F+VN+     ++Q+V   M   +  G 
Sbjct: 72  EGRIDVLVNNAGYGSYGAIEDVPIDEAR---RQFEVNLFGAARLTQLVLPHM-RAQRSGR 127

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG 196
           I+N+SS+ GK        Y A+K AL+  +  + LE+ P+ I V  ++P  +     +T 
Sbjct: 128 IINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGI-----KTE 182

Query: 197 WSDPA 201
           W D A
Sbjct: 183 WGDIA 187

Length = 273

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 69.3 bits (170), Expect = 3e-14
 Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 15/174 (8%)

Query: 23  GIGRCIVEKLS-QHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV- 79
           G+G  I    + +   +++   +++   ++L          +Q D+ D  + +A  +   
Sbjct: 16  GLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATAT 75

Query: 80  ----GPVDVLINNAAVA-RFD-----RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMI 129
                P+  ++NNA     FD     +  DI  E+      + ++K  +N  Q     M 
Sbjct: 76  EHFGKPITTVVNNALADFSFDGDARKKADDITWEDF-QQQLEGSVKGALNTIQAALPGMR 134

Query: 130 DHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSV 183
           +    G I+N+ +   +  +  +  Y+ +KAAL  +TR +A ELGPY I VN V
Sbjct: 135 EQG-FGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMV 187

Length = 253

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 69.3 bits (169), Expect = 3e-14
 Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 10/143 (6%)

Query: 76  VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
            +++G +D+ + NA +      LD+  E     + + N+  V   +Q  +K M+     G
Sbjct: 81  TAELGGIDIAVCNAGIITVTPMLDMPLEEF-QRLQNTNVTGVFLTAQAAAKAMVKQGQGG 139

Query: 136 SIVNVSSIAGKT----ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
            I+N +S++G          H  Y ASKAA+  +T+ MA+EL P+ IRVNSV P  ++T+
Sbjct: 140 VIINTASMSGHIINVPQQVSH--YCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTE 197

Query: 192 MGRTGWSDPAKAGPMLAKTPLGR 214
           +            P   K PLGR
Sbjct: 198 LVEPYTEYQPLWEP---KIPLGR 217

Length = 253

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 70.4 bits (173), Expect = 5e-14
 Identities = 61/228 (26%), Positives = 87/228 (38%), Gaps = 43/228 (18%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVSK 78
           GIGR    K+++  A +  +++    LD L                DL D A     V  
Sbjct: 382 GIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKD 441

Query: 79  V----GPVDVLINNA-------AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT 127
           +    G VD L+NNA            DRF D +          VN    + +   +   
Sbjct: 442 ILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYER------TMAVNYFGAVRLILGLLPH 495

Query: 128 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
           M + +  G +VNVSSI  +T     + Y ASKAALD+ +   A E     I   ++   +
Sbjct: 496 MRERR-FGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPL 554

Query: 188 VMTQM---------GRTGWSDPAKAGPMLAK----------TPLGRFA 216
           V T M           T  S P +A  M+ +          TPLG FA
Sbjct: 555 VRTPMIAPTKRYNNVPT-IS-PEEAADMVVRAIVEKPKRIDTPLGTFA 600

Length = 657

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 69.3 bits (170), Expect = 5e-14
 Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 17/160 (10%)

Query: 65  DLQDWART----RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIK---AV 117
           D+ DW        AAV   G +DVL+NNA + R DR +    E   D++  V++K   A 
Sbjct: 72  DIADWDGAANLVDAAVETFGGLDVLVNNAGILR-DRMIANMSEEEWDAVIAVHLKGHFAT 130

Query: 118 INISQVV--SKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP 175
           +  +     +++     +   I+N SS AG     G   YSA+KA + ++T   A ELG 
Sbjct: 131 LRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLVAAAELGR 190

Query: 176 YNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRF 215
           Y + VN++ P        RT  ++   A  M+AK   G F
Sbjct: 191 YGVTVNAIAP------AARTRMTETVFAE-MMAKPEEGEF 223

Length = 286

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 68.9 bits (169), Expect = 6e-14
 Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 22/167 (13%)

Query: 61  TVQVDLQDWARTRAAVSK----VGPVDVLINNAAVARF-DRFLDIDEENLIDSIFDVNIK 115
            +  D+ D A  + AV +    +G +D+L+NNAA         DI  E L D  F  NI 
Sbjct: 100 LIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQL-DKTFKTNIY 158

Query: 116 AVINISQVVSKTMIDHKIQGS-IVNVSSIAGKTALEGHTI---YSASKAALDSITRTMAL 171
           +  +    ++K  + H  QGS I+N  SI   T  EG+     YSA+K A+ + TR++A 
Sbjct: 159 SYFH----MTKAALPHLKQGSAIINTGSI---TGYEGNETLIDYSATKGAIHAFTRSLAQ 211

Query: 172 ELGPYNIRVNSVQPTVVMTQMGRTGWS--DPAKAGPMLAKTPLGRFA 216
            L    IRVN+V P  + T +  + +     ++ G   + TP+ R  
Sbjct: 212 SLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFG---SNTPMQRPG 255

Length = 290

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 68.9 bits (169), Expect = 6e-14
 Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 16/185 (8%)

Query: 23  GIGRCIVEKLSQHEAIII-------ALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAA 75
           GIGR    +L+   A +         L++T A+  +L    P  + + +   D     AA
Sbjct: 11  GIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAA 70

Query: 76  --VSKVGPVDVLINNAAVARF---DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
              +  G +DV++N A ++ +   DR        ++D    VN+   I++ +     M+ 
Sbjct: 71  DIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVD----VNLMGPIHVIETFVPPMVA 126

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
               G +VNVSS AG  AL  H  YSASK  L  ++  +  +L  + I V+ V P  V T
Sbjct: 127 AGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKT 186

Query: 191 QMGRT 195
            +  T
Sbjct: 187 PLVNT 191

Length = 272

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 68.9 bits (169), Expect = 6e-14
 Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 18/174 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQ--TVQVDLQDWARTRAAV 76
           GIG   VE L +  A +    + +  L S    L++ FP  +    + D+ D A   A  
Sbjct: 19  GIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFA 78

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           + V    G VD+L+NNA   R   F D  ++   D   ++   +VIN ++     ++   
Sbjct: 79  AAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDE-LELKYFSVINPTRAF-LPLLRAS 136

Query: 133 IQGSIVNVSSIAGKTAL--EGHTI-YSASKAALDSITRTMALELGPYNIRVNSV 183
              SIV V+S+    AL  E H +  SA++A L ++ +++A EL P  +RVNS+
Sbjct: 137 AAASIVCVNSL---LALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRVNSI 187

Length = 265

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 68.0 bits (166), Expect = 1e-13
 Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 12/180 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIAL------SKTQANLDSLKQAFPNVQTVQVDLQDWARTRAA- 75
           GIGR I  +L+  +   I +      S  ++ + +++    N + +Q D+ D    R   
Sbjct: 9   GIGRAIANRLAA-DGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLL 67

Query: 76  ---VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
              +++ G    ++ NA + R   F  + EE+  D +   N+    N+    +  MI  +
Sbjct: 68  EADIAEHGAYYGVVLNAGITRDAAFPALSEEDW-DIVIHTNLDGFYNVIHPCTMPMIRAR 126

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G I+ ++S++G     G   YSA+KA L   T+ +A+EL    I VN + P ++ T+M
Sbjct: 127 QGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEM 186

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 68.0 bits (166), Expect = 1e-13
 Identities = 53/173 (30%), Positives = 86/173 (49%), Gaps = 13/173 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIG+ +    ++    +IA  + Q+ LD L     N+ T+  D+ D   T+AA+S++  +
Sbjct: 12  GIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFI 71

Query: 83  -DVLINNAAVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID--HKIQGSI 137
            ++ I NA    +  D  +D     L+  +F+VN+  V N  +   +  +   H++    
Sbjct: 72  PELWIFNAGDCEYMDDGKVDA---TLMARVFNVNVLGVANCIEG-IQPHLSCGHRV---- 123

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
           V V SIA + AL     Y ASKAA+    RT+ L+L P  I V +V P  V T
Sbjct: 124 VIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVAT 176

Length = 240

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 68.0 bits (166), Expect = 1e-13
 Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 16/164 (9%)

Query: 62  VQVDLQDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENL----IDSIFDVN 113
           +Q D+ D  +  A  + +     P+  L+NNA +     F     ENL    I+ +   N
Sbjct: 56  LQADISDENQVVAMFTAIDQHDEPLAALVNNAGIL----FTQCTVENLTAERINRVLSTN 111

Query: 114 IKA-VINISQVVSKTMIDHKIQG-SIVNVSSIAGKTALEGHTI-YSASKAALDSITRTMA 170
           +    +   + V +  + H   G +IVNVSS A +    G  + Y+ASK A+D++T  ++
Sbjct: 112 VTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLS 171

Query: 171 LELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGR 214
           LE+    IRVN V+P  + T+M  +G  +P +   + +  P+ R
Sbjct: 172 LEVAAQGIRVNCVRPGFIYTEMHASG-GEPGRVDRVKSNIPMQR 214

Length = 247

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 67.5 bits (165), Expect = 1e-13
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 58  NVQTVQVDLQDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVN 113
                  D  +     A    V      VD+L+ +A +A+  +  D +  +   S+  VN
Sbjct: 53  KAYGFGADATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKITDFELGDFDRSL-QVN 111

Query: 114 IKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL 173
           +      ++  SK MI   IQG I+ ++S +GK   + ++ YSA+K     +T+++AL+L
Sbjct: 112 LVGYFLCAREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDL 171

Query: 174 GPYNIRVNSVQP 185
             + I VNS+  
Sbjct: 172 AEHGITVNSLML 183

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 67.0 bits (164), Expect = 2e-13
 Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 12/178 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN----VQTVQVDLQDWARTRA---- 74
           GIGR      ++  A ++  +++   L  L +           V  D+ D A+       
Sbjct: 11  GIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADAAQVERAADT 70

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           AV + G +D  +NNA VA F RF D+  E     +FDVN    +  +      +   +  
Sbjct: 71  AVERFGRIDTWVNNAGVAVFGRFEDVTPEEF-RRVFDVNYLGHVYGTLAALPHL-RRRGG 128

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP--YNIRVNSVQPTVVMT 190
           G+++NV S+ G  +      YSASK A+   T ++  EL      I V  VQPT + T
Sbjct: 129 GALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLVQPTAMNT 186

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 66.8 bits (163), Expect = 2e-13
 Identities = 43/178 (24%), Positives = 88/178 (49%), Gaps = 10/178 (5%)

Query: 23  GIGRCIVEKL-SQHEAIIIA---LSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG      L ++  A+ IA   + + +A  D L+        +++D+ D  +  AAV +
Sbjct: 14  GIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELDVTDEQQVDAAVER 73

Query: 79  ----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
               +G +D+L+NNA +       D D  +    + D N+  ++  +       +    +
Sbjct: 74  TVEALGRLDILVNNAGIMLLGPVEDADTTDW-TRMIDTNLLGLMYTTHAALPHHLLRN-K 131

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           G+IVN+SS+AG+ A+    +Y+A+K  +++ +  +  E+    +RV  ++P  V T++
Sbjct: 132 GTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRVVVIEPGTVDTEL 189

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 66.7 bits (163), Expect = 3e-13
 Identities = 43/147 (29%), Positives = 74/147 (50%), Gaps = 4/147 (2%)

Query: 59  VQTVQVDLQDWARTRAAVSKV--GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKA 116
           ++T+Q+D+ D     AAV +V    VDVL+ NA V      L+   E+ + S+FDVN+  
Sbjct: 55  LETLQLDVCDSKSVAAAVERVTERHVDVLVCNAGVGLLGP-LEALSEDAMASVFDVNVFG 113

Query: 117 VINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPY 176
            + + Q     M      G I+  SS+ G   L  + +Y ASK AL+ +  ++A++L P+
Sbjct: 114 TVRMLQAFLPDMKRRG-SGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPF 172

Query: 177 NIRVNSVQPTVVMTQMGRTGWSDPAKA 203
           N+ ++ ++   V T         P + 
Sbjct: 173 NVHLSLIECGPVHTAFMEKVLGSPEEV 199

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 66.6 bits (163), Expect = 3e-13
 Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 34/164 (20%)

Query: 73  RAAVSKVGPVDVLINNAAV-----------ARFDRFLDIDEENLIDSIFDVNIKAVINIS 121
            AA ++ G +D+L+NNA +             +DR + +    ++ S F   I+A +   
Sbjct: 70  AAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAV----MLTSAF-HTIRAALPH- 123

Query: 122 QVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVN 181
                  +  +  G I+N++S  G  A    + Y A+K  L  +T+ +ALE+  + I VN
Sbjct: 124 -------MKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVN 176

Query: 182 SVQPTVVMTQMGRTGWSDPAKA----------GPMLAKTPLGRF 215
           ++ P  V T +     +D AK             ML   P  RF
Sbjct: 177 AICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRF 220

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 66.5 bits (163), Expect = 5e-13
 Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 10/196 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN---VQTVQVDLQDWARTRAAVSKV 79
           GIG  +  +L    A +  +   +A L +L         V TV  D+ D A  +AA  + 
Sbjct: 20  GIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEA 79

Query: 80  ----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
               G +DV++ NA +A       +D +     + DVN+  V +  +     +I+ +  G
Sbjct: 80  VERFGGIDVVVANAGIASGGSVAQVDPD-AFRRVIDVNLLGVFHTVRATLPALIERR--G 136

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT 195
            ++ VSS+A   A  G   Y ASKA +++    + LE+  + + V S   + + T + R 
Sbjct: 137 YVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRD 196

Query: 196 GWSDPAKAGPMLAKTP 211
             +D      + A+ P
Sbjct: 197 ADADLPAFRELRARLP 212

Length = 296

>gnl|CDD|236057 PRK07578, PRK07578, short chain dehydrogenase; Provisional

 Score = 64.4 bits (158), Expect = 9e-13
 Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 29/178 (16%)

Query: 24  IGRCIVEKLSQ-HEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           IGR +V +LS+ HE  +I   ++  +             VQVD+ D A  RA   KVG V
Sbjct: 12  IGRAVVAELSKRHE--VITAGRSSGD-------------VQVDITDPASIRALFEKVGKV 56

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKA----VINISQVVSKTMIDHKIQGSIV 138
           D +++ A    F    ++ +E+     F+V +++     +N+  +    + D    GS  
Sbjct: 57  DAVVSAAGKVHFAPLAEMTDED-----FNVGLQSKLMGQVNLVLIGQHYLNDG---GSFT 108

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG 196
             S I     + G    +    AL+   +  ALEL P  IR+N V PTV+   + + G
Sbjct: 109 LTSGILSDEPIPGGASAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESLEKYG 165

Length = 199

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 65.0 bits (159), Expect = 1e-12
 Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 28/179 (15%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKT---QANLDSLKQAFPNVQTVQVDLQDWARTR----AA 75
           GIGR +  + +   A ++ + ++         L+ A      +  DL+ +A  +    AA
Sbjct: 19  GIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAA 78

Query: 76  VSKVGPVDVLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINIS--------QVVSK 126
           V   G +DVLINN         F + +EE          I+A I  S        + V  
Sbjct: 79  VEAFGRIDVLINNVGGTIWAKPFEEYEEEQ---------IEAEIRRSLFPTLWCCRAVLP 129

Query: 127 TMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
            M+     G+IVNVSSIA  T       YSA+K  ++++T ++A E   + IRVN+V P
Sbjct: 130 HMLAQG-GGAIVNVSSIA--TRGINRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAP 185

Length = 260

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 64.7 bits (157), Expect = 2e-12
 Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 11/154 (7%)

Query: 47  ANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLI 106
           ANL+SL      V+ +   L +  + R   +K    D+LINNA +     F++   E   
Sbjct: 61  ANLESLH----GVEALYSSLDNELQNRTGSTKF---DILINNAGIGP-GAFIEETTEQFF 112

Query: 107 DSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT 166
           D +  VN KA   I Q     + D+     I+N+SS A + +L     YS +K A++++T
Sbjct: 113 DRMVSVNAKAPFFIIQQALSRLRDNS---RIINISSAATRISLPDFIAYSMTKGAINTMT 169

Query: 167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP 200
            T+A +LG   I VN++ P  + T M     SDP
Sbjct: 170 FTLAKQLGARGITVNAILPGFIKTDMNAELLSDP 203

Length = 252

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 64.5 bits (157), Expect = 2e-12
 Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 45/220 (20%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVS 77
           GIGR IV    ++ A ++  ++ +A   +L+         + + V  D+      +  +S
Sbjct: 20  GIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCDVTKEEDIKTLIS 79

Query: 78  KV----GPVDVLINNAAV---------ARFDRFLDIDEENLIDSIFDVNIKAVINISQVV 124
                 G +D L+NNA                F D+   NLI S F            + 
Sbjct: 80  VTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLI-SYF------------LA 126

Query: 125 SKTMIDH--KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNS 182
           SK  + H  K QG+I+N+SS+ G    +    Y A+K A+ ++T+ +A++   Y +RVN 
Sbjct: 127 SKYALPHLRKSQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVRVNC 186

Query: 183 VQPTVVMTQMGRTGWSDPAKAGPMLAKT--------PLGR 214
           + P  + T +    W + A   P    T         LGR
Sbjct: 187 ISPGNIWTPL----WEELAAQTPDTLATIKEGELAQLLGR 222

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 65.6 bits (161), Expect = 2e-12
 Identities = 52/184 (28%), Positives = 88/184 (47%), Gaps = 25/184 (13%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQA--NLDSLKQAFPNVQTVQVD---------LQDWAR 71
           GIG  I E L++  A ++ L    A   L ++         + +D         + +   
Sbjct: 221 GIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-GGTALALDITAPDAPARIAEHLA 279

Query: 72  TRAAVSKVGPVDVLINNAAVARFDRFL-DIDEENLIDSIFDVNIKAVINISQVV--SKTM 128
            R      G +D++++NA + R D+ L ++DE    DS+  VN+ A + I++ +  +  +
Sbjct: 280 ERH-----GGLDIVVHNAGITR-DKTLANMDEARW-DSVLAVNLLAPLRITEALLAAGAL 332

Query: 129 IDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
            D    G IV VSSI+G     G T Y+ASKA +  + + +A  L    I +N+V P  +
Sbjct: 333 GD---GGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFI 389

Query: 189 MTQM 192
            TQM
Sbjct: 390 ETQM 393

Length = 450

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 2e-12
 Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 12/188 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL----KQAFPNVQTVQVDLQDWARTRA---- 74
           GIGR   +  ++  A ++  ++ QA LD L    +        +  D++D A  +A    
Sbjct: 17  GIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVAL 76

Query: 75  AVSKVGPVDVLINNA-AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           AV + G +D+  NNA  +       ++  E   +++   N+ +    ++     M+    
Sbjct: 77  AVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETL-ATNLTSAFLGAKHQIPAMLARG- 134

Query: 134 QGSIVNVSSIAGKTA-LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            GS++  S+  G TA   G   Y+ASKA L  +T+ +A E G   IRVN++ P    T M
Sbjct: 135 GGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPM 194

Query: 193 GRTGWSDP 200
           GR     P
Sbjct: 195 GRAMGDTP 202

Length = 254

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 3e-12
 Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 18/184 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQV---DLQDWARTRAA---- 75
           GIG+ +  + ++  A +  +++    L +     P    V V   D++D     AA    
Sbjct: 13  GIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADF 72

Query: 76  VSKVGPVDVLINNAAVARFDRFLDIDEENLID-----SIFDVNIKAVINISQVVSKTMID 130
           ++  G  DV+I NA ++          E   D      + D N   ++   Q     M  
Sbjct: 73  IAAHGLPDVVIANAGISV-----GTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRA 127

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            + +G++V ++S+AG   L G   YSASKAA      ++ +EL P  +RV ++ P  + T
Sbjct: 128 AR-RGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRT 186

Query: 191 QMGR 194
            M  
Sbjct: 187 PMTA 190

Length = 257

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 63.9 bits (156), Expect = 3e-12
 Identities = 45/188 (23%), Positives = 84/188 (44%), Gaps = 31/188 (16%)

Query: 24  IGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQT---------VQVDLQDWARTRA 74
           IG  +V+ + +   I+IA      + ++L +   ++           V++D+ D      
Sbjct: 16  IGSALVKAILEAGGIVIA---ADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEE 72

Query: 75  AVSKV----GPVDVLINNAAVARFD---RFLDIDEENLIDSIFDVNIKAVINISQVVSKT 127
            +SK     G +D  +N A     D   +F D+  ++  +++  +++ +    SQ  +K 
Sbjct: 73  FLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENL-SLHLGSSFLFSQQFAKY 131

Query: 128 MIDHKIQGSIVNVSSIAGKTA-----LEGHTI-----YSASKAALDSITRTMALELGPYN 177
                  G++VN+SSI G  A      EG ++     Y+A KA +  +T+ +A      N
Sbjct: 132 FKKQG-GGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSN 190

Query: 178 IRVNSVQP 185
           IRVN V P
Sbjct: 191 IRVNCVSP 198

Length = 256

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 63.4 bits (154), Expect = 4e-12
 Identities = 48/168 (28%), Positives = 77/168 (45%), Gaps = 9/168 (5%)

Query: 23  GIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWART----RAAVS 77
           GIG+ I     +  + ++ A    +   D  +   PN+  V  D+ D         A + 
Sbjct: 12  GIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNLFFVHGDVADETLVKFVVYAMLE 71

Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           K+G +DVL+NNAA         +  E   D I  VN+     +S+     +I +K  G I
Sbjct: 72  KLGRIDVLVNNAARGSKGILSSLLLEEW-DRILSVNLTGPYELSRYCRDELIKNK--GRI 128

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
           +N++S     +      Y+ASK  L ++T  +A+ LGP  IRVN + P
Sbjct: 129 INIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCISP 175

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 63.1 bits (154), Expect = 6e-12
 Identities = 51/173 (29%), Positives = 84/173 (48%), Gaps = 15/173 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GI   I +  ++  A +   S++Q  +D+    L+QA P    V  D++D+A   AA ++
Sbjct: 20  GINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQ 79

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH--K 132
           +    GP+DVL++ AA   F         N   ++ D+++    N    V K       +
Sbjct: 80  IADEFGPIDVLVSGAA-GNFPAPAAGMSANGFKTVVDIDLLGTFN----VLKAAYPLLRR 134

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
              SI+ +S+      +       A+KA +D +TRT+ALE GP  IRVNS+ P
Sbjct: 135 PGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVP 187

Length = 264

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 62.1 bits (151), Expect = 1e-11
 Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 19/206 (9%)

Query: 23  GIGRCIVEKLSQHEAII----IALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRA---- 74
           GIG     +L+   A +    I     +A  D +   F     V  D+ D     A    
Sbjct: 18  GIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLF-----VPTDVTDEDAVNALFDT 72

Query: 75  AVSKVGPVDVLINNAAVA--RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           A    G VD+  NNA ++    D  L+   +     + DVN+ +V    +     M+   
Sbjct: 73  AAETYGSVDIAFNNAGISPPEDDSILNTGLDAW-QRVQDVNLTSVYLCCKAALPHMVRQG 131

Query: 133 IQGSIVNVSS-IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
            +GSI+N +S +A   +      Y+ASK  + +++R + ++     IRVN++ P  V T 
Sbjct: 132 -KGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTP 190

Query: 192 MGRTGWS-DPAKAGPMLAKTPLGRFA 216
           + +  ++ DP +A   L   P+GRFA
Sbjct: 191 LLQELFAKDPERAARRLVHVPMGRFA 216

Length = 255

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 62.0 bits (151), Expect = 1e-11
 Identities = 49/195 (25%), Positives = 90/195 (46%), Gaps = 11/195 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           G+G  + E+L Q    ++ ++++  +      A   +  V++DL D A   A ++     
Sbjct: 12  GLGAALAEQLLQPGIAVLGVARS-RHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLA 70

Query: 80  GPVD-----VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
             VD     +LINNA        L   +   I     +N+ A + ++  +++       +
Sbjct: 71  AFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQA-ASDAAE 129

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
             I+++SS A + A  G ++Y A+KAALD   R +AL+     +R+ S+ P VV T M  
Sbjct: 130 RRILHISSGAARNAYAGWSVYCATKAALDHHARAVALD-ANRALRIVSLAPGVVDTGMQA 188

Query: 195 TGWSDPAKAGPMLAK 209
           T  +   +  PM  +
Sbjct: 189 TIRATDEERFPMRER 203

Length = 243

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 60.6 bits (147), Expect = 2e-11
 Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 16/160 (10%)

Query: 71  RTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
           R    V  V   DV+++NAA+    R +D+     I+     N+     + +   + M  
Sbjct: 21  RGSPKVLVVSRRDVVVHNAAILDDGRLIDLTGSR-IERAIRANVVGTRRLLEAARELM-K 78

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            K  G  + +SS+AG     G   Y+ASKAALD + +  A E     +   +V       
Sbjct: 79  AKRLGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVAC----- 133

Query: 191 QMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLP 230
                G      AG  +AK P+         +   R + P
Sbjct: 134 -----GTW----AGSGMAKGPVAPEEILGNRRHGVRTMPP 164

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 60.5 bits (147), Expect = 6e-11
 Identities = 54/201 (26%), Positives = 93/201 (46%), Gaps = 15/201 (7%)

Query: 23  GIGRCIVEKL-SQHEAIIIALSKTQANLDSLKQAFPN-VQTVQVDLQDWARTRAAVSK-- 78
           G GR + E+L ++ + +   + +  A LD LK  + + +  +Q+D+ D A  RA V +  
Sbjct: 13  GFGRGMTERLLARGDRVAATVRRPDA-LDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAF 71

Query: 79  --VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ-- 134
             +G +DV+++NA    F    ++ +  +   I D N+   I   QV+   +   + Q  
Sbjct: 72  AALGRIDVVVSNAGYGLFGAAEELSDAQIRRQI-DTNLIGSI---QVIRAALPHLRRQGG 127

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G IV VSS  G+ A  G ++Y A+K  ++     +A E+ P+ I    V+P    T  G 
Sbjct: 128 GRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGA 187

Query: 195 TGWSDPAKAGPMLAKTPLGRF 215
               D          TP+G  
Sbjct: 188 G--LDRGAPLDAYDDTPVGDL 206

Length = 276

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 59.7 bits (144), Expect = 9e-11
 Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 25/196 (12%)

Query: 23  GIGRCIVEKLSQHEAIII------------ALSKTQAN------LDSLKQAFPNVQTVQV 64
           GIGR I  +L+   A++              + + ++N      +++   +   V+ +  
Sbjct: 17  GIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVE 76

Query: 65  DLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVV 124
            L++  + R   S++   D+L+NNA +       +  EE + D I  VNIKA   + Q  
Sbjct: 77  QLKNELQIRVGTSEI---DILVNNAGIGTQGTIENTTEE-IFDEIMAVNIKAPFFLIQ-- 130

Query: 125 SKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQ 184
            +T+   + +G ++N+SS   +    G   Y  SK AL+++T  +A  LG   I VN++ 
Sbjct: 131 -QTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIM 189

Query: 185 PTVVMTQMGRTGWSDP 200
           P    T +      DP
Sbjct: 190 PGYTKTDINAKLLDDP 205

Length = 254

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 59.9 bits (145), Expect = 1e-10
 Identities = 49/211 (23%), Positives = 86/211 (40%), Gaps = 19/211 (9%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG+ I  +L++  A   I  L++  AN   D + +A      V +D+ +     A + K
Sbjct: 18  GIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDK 77

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           V    G VD+L++NA +   +   +    +    +  +++      ++   K M      
Sbjct: 78  VAERFGSVDILVSNAGIQIVNPIENYSFADW-KKMQAIHVDGAFLTTKAALKHMYKDDRG 136

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT---- 190
           G ++ + S+    A    + Y  +K  L  + R +A E   +N+R + V P  V T    
Sbjct: 137 GVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVD 196

Query: 191 -----QMGRTGWS-DPAKAGPMLAKTPLGRF 215
                Q    G S +      ML KT  G F
Sbjct: 197 KQIPEQAKELGISEEEVVKKVMLGKTVDGVF 227

Length = 262

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 59.9 bits (145), Expect = 1e-10
 Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 22/190 (11%)

Query: 20  PKPGIGRCIVEKLSQHEAIIIALSKTQANL----DSLKQAFPNVQ--TVQVDL-----QD 68
           P  GIG+    +L++    ++ +++    L    DS++  +   Q  TV VD      + 
Sbjct: 61  PTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEG 120

Query: 69  WARTRAAVSKVGPVDVLINNAAV----ARFDRFLDIDEENLIDSIFDVNIKAVINISQVV 124
             R +  +  +  V VLINN  V    ARF  F ++DEE L+ ++  VN++    ++Q V
Sbjct: 121 VKRIKETIEGLD-VGVLINNVGVSYPYARF--FHEVDEE-LLKNLIKVNVEGTTKVTQAV 176

Query: 125 SKTMIDHKIQGSIVNVSSIAGKTALEG--HTIYSASKAALDSITRTMALELGPYNIRVNS 182
              M+  K +G+I+N+ S A         + +Y+A+KA +D  +R + +E     I V  
Sbjct: 177 LPGMLKRK-KGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQC 235

Query: 183 VQPTVVMTQM 192
             P  V T+M
Sbjct: 236 QVPLYVATKM 245

Length = 320

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 59.4 bits (144), Expect = 1e-10
 Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 27/188 (14%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLK----QAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG    E+ ++  A ++A+++ +  LD++     +A  +   V  DL D     A V+ 
Sbjct: 51  GIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVAD 110

Query: 79  V----GPVDVLINNAA--VAR-----FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT 127
           V    G VD+LINNA   + R      DR+ D++          +N  A + + + ++  
Sbjct: 111 VEKRIGGVDILINNAGRSIRRPLAESLDRWHDVER------TMVLNYYAPLRLIRGLAPG 164

Query: 128 MIDHKIQGSIVNVSS---IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQ 184
           M++    G I+NV++   ++  + L    +Y+ASKAAL +++R +  E G   +   ++ 
Sbjct: 165 MLERG-DGHIINVATWGVLSEASPLFS--VYNASKAALSAVSRVIETEWGDRGVHSTTLY 221

Query: 185 PTVVMTQM 192
             +V T M
Sbjct: 222 YPLVATPM 229

Length = 293

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 58.3 bits (141), Expect = 4e-10
 Identities = 28/81 (34%), Positives = 41/81 (50%)

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           GS V +SSIA          Y  +K+A+D + +  A ELGP  +RVNS++P ++ T +  
Sbjct: 139 GSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVA 198

Query: 195 TGWSDPAKAGPMLAKTPLGRF 215
                P  +    A TPL R 
Sbjct: 199 PITESPELSADYRACTPLPRV 219

Length = 276

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 55.9 bits (135), Expect = 2e-09
 Identities = 48/192 (25%), Positives = 82/192 (42%), Gaps = 12/192 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD-SLKQAFPNVQTVQV-----DLQDWARTRAAV 76
           GIG  I   L+   A I+      A    +++        V+V     DL   A     V
Sbjct: 13  GIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGADLSKPAAIEDMV 72

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           +      G VD+L+NNA +       D   E   D+I  +N+ AV + +++    M   +
Sbjct: 73  AYAQRQFGGVDILVNNAGIQHVAPIEDFPTEKW-DAIIALNLSAVFHTTRLALPHM-KKQ 130

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G I+N++S+ G  A    + Y A+K  +  +T+ +ALE     +  N++ P  V+T +
Sbjct: 131 GWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTCNAICPGWVLTPL 190

Query: 193 GRTGWSDPAKAG 204
                S  A+  
Sbjct: 191 VEKQISALAQKN 202

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 11/178 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVG-- 80
           G+G  +V++L +    + A  +      +L QA P V   ++D+ D A     + ++   
Sbjct: 12  GLGLGLVDRLLERGWQVTATVRGPQQDTAL-QALPGVHIEKLDMNDPASLDQLLQRLQGQ 70

Query: 81  PVDVLINNAAVA--RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
             D+L  NA ++        D      I  +F  N  A I +++ +   +     QG + 
Sbjct: 71  RFDLLFVNAGISGPAHQSAADATAAE-IGQLFLTNAIAPIRLARRLLGQV--RPGQGVLA 127

Query: 139 NVSSIAGKTALE---GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            +SS  G   L       +Y ASKAAL+S+TR+   ELG   + V S+ P  V T MG
Sbjct: 128 FMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMG 185

Length = 225

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 55.7 bits (135), Expect = 3e-09
 Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 20/141 (14%)

Query: 57  PNVQTVQVDLQDWARTRAAV----SKVGPVDV--LINNAAVARFDRFLDIDEENLIDSIF 110
             ++T+Q+D+    + + A       VG   +  L+NNA +  F      DEE L    +
Sbjct: 48  DRLRTLQLDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFG----GDEELLPMDDY 103

Query: 111 ----DVNIKAVINISQVVSKTMID--HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS 164
               +VN+   +     V+K  +    + +G +VNVSS+ G+        Y ASKAA+++
Sbjct: 104 RKCMEVNLFGTVE----VTKAFLPLLRRAKGRVVNVSSMGGRVPFPAGGAYCASKAAVEA 159

Query: 165 ITRTMALELGPYNIRVNSVQP 185
            + ++  EL P+ ++V+ ++P
Sbjct: 160 FSDSLRRELQPWGVKVSIIEP 180

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 55.3 bits (133), Expect = 3e-09
 Identities = 46/192 (23%), Positives = 78/192 (40%), Gaps = 8/192 (4%)

Query: 29  VEKLSQHEAIIIALSKTQANLDSLKQAFP--NVQTVQVDLQDWARTRAAV-SKVGPVDVL 85
            E L++    ++    + A+     QAF   N  T  +  Q       AV    G +DVL
Sbjct: 18  AEALTEDGYTVVCHDASFADAAER-QAFESENPGTKALSEQKPEELVDAVLQAGGAIDVL 76

Query: 86  INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAG 145
           ++N  + R    +D   E  I   F+        + Q     M      GSI+ ++S   
Sbjct: 77  VSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAIAQMKKAG-GGSIIFITSAVP 135

Query: 146 KTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM--TQMGRTGW-SDPAK 202
           K  L  +++Y  ++AA  ++  ++A EL   NI V ++ P      T    + W ++P  
Sbjct: 136 KKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGPNFFNSPTYFPTSDWENNPEL 195

Query: 203 AGPMLAKTPLGR 214
              +    PLGR
Sbjct: 196 RERVKRDVPLGR 207

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 55.1 bits (133), Expect = 3e-09
 Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 24/189 (12%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQ-------TVQVDLQDWARTRAA 75
           GIGR I  +L +  A +    +T   L  L      ++        V+ D  D     A 
Sbjct: 14  GIGRGIALQLGEAGATVYITGRTI--LPQLPGTAEEIEARGGKCIPVRCDHSDDDEVEAL 71

Query: 76  VSKV-----GPVDVLINNA-------AVARFDRFLDIDEENLIDSIFDVNIKAVINISQV 123
             +V     G +D+L+NNA        V     F +       D I +V ++A    S  
Sbjct: 72  FERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIW-DDINNVGLRAHYACSVY 130

Query: 124 VSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSV 183
            +  M+    +G IV +SS  G   L     Y   KAA+D +   MA EL P+ + V S+
Sbjct: 131 AAPLMVKAG-KGLIVIISSTGGLEYLFN-VAYGVGKAAIDRMAADMAHELKPHGVAVVSL 188

Query: 184 QPTVVMTQM 192
            P  V T++
Sbjct: 189 WPGFVRTEL 197

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 5e-09
 Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 15/184 (8%)

Query: 44  KTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDE 102
             +A    L+ A   +V    +DL          ++ G +D+L+NNA         D+D+
Sbjct: 43  ALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDILVNNAGAIPGGGLDDVDD 102

Query: 103 ENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS--IVNVSSIAGKTALEGHTIYSASKA 160
                + +++ +   I+++++    M   K +GS  IVNV   AG+     +   SA  A
Sbjct: 103 AAW-RAGWELKVFGYIDLTRLAYPRM---KARGSGVIVNVIGAAGENPDADYICGSAGNA 158

Query: 161 ALDSITRTMALELGPYNIRVNSVQPTVVMT--------QMGRTGWSDPAKAGPMLAKTPL 212
           AL + TR +  +     +RV  V P  V T           R    D ++   +LA  PL
Sbjct: 159 ALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPL 218

Query: 213 GRFA 216
           GR A
Sbjct: 219 GRPA 222

Length = 259

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 54.9 bits (132), Expect = 5e-09
 Identities = 39/176 (22%), Positives = 82/176 (46%), Gaps = 10/176 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----NVQTVQVDL---QDWARTRA 74
           GIG  +   L++  A +I LS+ + NL   ++        +V  +  DL   +D  RT  
Sbjct: 19  GIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVK 78

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
            +  +G  D+   +    +   F+++  E+  +    + +   + +++ +   M + K  
Sbjct: 79  ELKNIGEPDIFFFSTGGPKPGYFMEMSMEDW-EGAVKLLLYPAVYLTRALVPAM-ERKGF 136

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
           G I+  +S+A K  +    + +  + ++  + RT+A ELGP  I VN + P ++ T
Sbjct: 137 GRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRT 192

Length = 263

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 54.7 bits (132), Expect = 6e-09
 Identities = 45/175 (25%), Positives = 71/175 (40%), Gaps = 18/175 (10%)

Query: 24  IGRCIVEKLSQHEAIIIAL------SKTQAN--LDSLKQAFPNVQTVQVDLQDWARTR-- 73
           +G  I   L+   A  +A+      SK  A   + ++K A       Q DL   A     
Sbjct: 20  LGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKL 79

Query: 74  --AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
              A +  G  D+ IN          ++I E    D +F VN K+     +   + + D+
Sbjct: 80  FDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEY-DEMFAVNSKSAFFFIKEAGRHLNDN 138

Query: 132 KIQGSIVN-VSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
              G IV  V+S+ G      ++ Y+ SKA ++  TR  + E G   I V +V P
Sbjct: 139 ---GKIVTLVTSLLGAFT-PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGP 189

Length = 257

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 54.5 bits (132), Expect = 6e-09
 Identities = 20/49 (40%), Positives = 31/49 (63%)

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSV 183
           GSIV +S +  +  + G+ +   +KAAL+S  R +A ELG   IRVN++
Sbjct: 134 GSIVTLSYLGSERVVPGYNVMGVAKAALESSVRYLAYELGRKGIRVNAI 182

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 52.9 bits (127), Expect = 2e-08
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 7/144 (4%)

Query: 73  RAAVSKVGPVDVLINNAA--VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
             AV ++G +D+L+N A    A  D   DI  E   D+ F  N+ A+  + +     +  
Sbjct: 126 ERAVKELGGLDILVNIAGKQTAVKD-IADITTEQF-DATFKTNVYAMFWLCKAAIPHL-- 181

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
                SI+N  SI           Y+++KAA+ + T+ +A ++    IRVN+V P  V T
Sbjct: 182 -PPGASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWT 240

Query: 191 QMGRTGWSDPAKAGPMLAKTPLGR 214
            +  +G   P K     ++TP+ R
Sbjct: 241 PLQPSGGQPPEKIPDFGSETPMKR 264

Length = 300

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 52.2 bits (125), Expect = 4e-08
 Identities = 49/193 (25%), Positives = 74/193 (38%), Gaps = 29/193 (15%)

Query: 24  IGRCIVEKLSQHEAIII-----ALSKTQANLDSLKQAFPNVQ-TVQVDLQDWARTRAAVS 77
           IG  I   L Q    ++     + +        L    PN   T Q DL + A   +   
Sbjct: 13  IGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCE 72

Query: 78  KV--------GPVDVLINNAAVARFDRFLDIDEENL----------IDSIFDVNIKAVIN 119
            +        G  DVL+NNA+       L  D              +  +F  N  A   
Sbjct: 73  AIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYF 132

Query: 120 ISQVVSKTMIDHKIQG-----SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELG 174
           + +  ++     + +      SIVN+        L G T+Y+ +K AL+ +TR+ ALEL 
Sbjct: 133 LIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHALEGLTRSAALELA 192

Query: 175 PYNIRVNSVQPTV 187
           P  IRVN V P +
Sbjct: 193 PLQIRVNGVAPGL 205

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 51.0 bits (123), Expect = 7e-08
 Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 35/210 (16%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA-----FPNVQTVQVDL--------QDW 69
           GIGR      ++H A +I L +T+  L+++         P    + +DL        Q  
Sbjct: 23  GIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQL 82

Query: 70  ARTRAAVSKVGPVDVLINNA----AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVS 125
           A T     + G +D +++NA     +   ++    D E     +  VN+ A   ++Q + 
Sbjct: 83  ADTIE--EQFGRLDGVLHNAGLLGELGPMEQ---QDPEVW-QDVMQVNVNATFMLTQALL 136

Query: 126 KTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
             ++      S+V  SS  G+        Y+ SK A + + + +A E    N+RVN + P
Sbjct: 137 PLLLKSP-AASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINP 195

Query: 186 TVVMTQMGRTGWSDPAKA----GPMLAKTP 211
               T M R      A A     P   KTP
Sbjct: 196 GGTRTAM-R------ASAFPGEDPQKLKTP 218

Length = 247

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 10/146 (6%)

Query: 49  LDSLKQAFPNVQTVQVDLQDWARTRAAVS---KVGPVDVLINNAAVARFDRFLDIDEENL 105
           LD ++ A      V  D+   A     V+    +G +D+++NNA + R DR L    +  
Sbjct: 54  LDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDIVVNNAGITR-DRMLFNMSDEE 112

Query: 106 IDSIFDVNIKAVINISQVVS------KTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK 159
            D++  V+++    +++  +             + G IVN SS AG     G   Y A+K
Sbjct: 113 WDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAK 172

Query: 160 AALDSITRTMALELGPYNIRVNSVQP 185
           A + ++T + A  LG Y +R N++ P
Sbjct: 173 AGITALTLSAARALGRYGVRANAICP 198

Length = 306

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 49.8 bits (119), Expect = 3e-07
 Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 6/135 (4%)

Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            A   +G ++VL++ A    F +  +I  E     +  +++     ++  V   MI+ + 
Sbjct: 80  QAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQV-QIHLVGANRLATAVLPGMIERR- 137

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           +G ++ V S            Y A+KA L+++   + +EL    +R + V P   +T M 
Sbjct: 138 RGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGM- 196

Query: 194 RTGWSDPA-KAGPML 207
             GWS PA   GPML
Sbjct: 197 --GWSLPAEVIGPML 209

Length = 274

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 49.5 bits (119), Expect = 3e-07
 Identities = 45/194 (23%), Positives = 78/194 (40%), Gaps = 36/194 (18%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLK---------------QAFPNVQTVQVDLQ 67
           GIG  I  + ++  A I+  +KT      L                QA P    +  D++
Sbjct: 17  GIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALP----LVGDVR 72

Query: 68  DWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQV 123
           D  +  AAV+K     G +D+ +NNA+        D       D +  +N++       +
Sbjct: 73  DEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPM-KRFDLMQQINVRGTF----L 127

Query: 124 VSKTMIDHKIQGS---IVNVS---SIAGKTALEGHTIYSASKAALDSITRTMALELGPYN 177
           VS+  + H  +     I+ +S   ++  K     HT Y+ +K  +   T  +A E     
Sbjct: 128 VSQACLPHLKKSENPHILTLSPPLNLDPKW-FAPHTAYTMAKYGMSLCTLGLAEEFRDDG 186

Query: 178 IRVNSVQP-TVVMT 190
           I VN++ P T + T
Sbjct: 187 IAVNALWPRTTIAT 200

Length = 273

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 49.6 bits (119), Expect = 3e-07
 Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 13/138 (9%)

Query: 41  ALSKTQANLDSLKQAFPNVQTVQVDLQDWAR----TRAAVSKVGPVDVLINNAAVARFDR 96
           AL +  A    L+     V  V+ D+ D A+      AA+ + G V +L NNA V     
Sbjct: 42  ALDRAVA---ELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGL 98

Query: 97  FLDIDEENLIDSIFDVNIKAVINISQVVSKTMI-----DHKIQGSIVNVSSIAGKTALEG 151
             +    +  + +  VN+  VI+  +  +  M+     D   +G IVN +S+AG  A   
Sbjct: 99  VWENSLADW-EWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPA 157

Query: 152 HTIYSASKAALDSITRTM 169
             IY+ SK A+ S+T T+
Sbjct: 158 MGIYNVSKHAVVSLTETL 175

Length = 287

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 49.1 bits (117), Expect = 4e-07
 Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 32/207 (15%)

Query: 23  GIGRCIVEKLSQ---HEAIIIALSKTQANLDSLKQAFPN---------VQTVQVDLQDWA 70
           G GR I ++L++       ++ LS    N ++L+Q             V  V +DL   A
Sbjct: 11  GFGRTIAQELAKCLKSPGSVLVLSAR--NDEALRQLKAEIGAERSGLRVVRVSLDLGAEA 68

Query: 71  ----RTRAAVSKVGPVD----VLINNAA----VARFDRFLDIDEENLIDSIFDVNIKAVI 118
                 +A      P      +LINNA     V++   F+D+ +   + + + +N+ +++
Sbjct: 69  GLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSK--GFVDLSDSTQVQNYWALNLTSML 126

Query: 119 NI-SQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYN 177
            + S V+        +  ++VN+SS+      +G  +Y A KAA D + + +ALE    N
Sbjct: 127 CLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLALEEKNPN 186

Query: 178 IRVNSVQPTVV---MTQMGRTGWSDPA 201
           +RV +  P V+   M Q  R    DP 
Sbjct: 187 VRVLNYAPGVLDTDMQQQVREESVDPD 213

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 48.7 bits (117), Expect = 5e-07
 Identities = 15/49 (30%), Positives = 30/49 (61%)

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSV 183
           GSI+ ++ +  +  +  + +   +KAAL++  R +A +LG   IRVN++
Sbjct: 138 GSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAI 186

Length = 259

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.6 bits (116), Expect = 6e-07
 Identities = 43/190 (22%), Positives = 74/190 (38%), Gaps = 11/190 (5%)

Query: 22  PGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWART---RAAVSK 78
            G+G  +     +  A +   S+ +  L  +K+       +   + D + T   R  + K
Sbjct: 15  EGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEK 74

Query: 79  VGPVDVLINNAAVARFDRFLD-IDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
              V   I+   V       D ++E + ++ +   +IK  +       + +   K   SI
Sbjct: 75  AAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFL---KEGSSI 131

Query: 138 VNVSSIAG-KTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT--QMGR 194
           V VSS++G   A      Y+ +KA L      +A EL    IRVN + PT +    +  R
Sbjct: 132 VLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER 191

Query: 195 TGWSDPAKAG 204
             W    K G
Sbjct: 192 N-WKKLRKLG 200

Length = 238

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 48.6 bits (116), Expect = 7e-07
 Identities = 32/166 (19%), Positives = 73/166 (43%), Gaps = 30/166 (18%)

Query: 26  RCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVL 85
           R + + L   E++++    T  + + +   F  ++                 +VG +  +
Sbjct: 50  RELADTLEGQESLLLPCDVT--SDEEITACFETIK----------------EEVGVIHGV 91

Query: 86  INNAAVARFD----RFLDIDEEN--LIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVN 139
            +  A A  +     FL+   +   L  +I   ++ AV   ++   K M +    GSIV 
Sbjct: 92  AHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAV---AREAKKLMTE---GGSIVT 145

Query: 140 VSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
           ++ + G+  ++ + +   +KA+L++  + +A +LG   IRVN++  
Sbjct: 146 LTYLGGERVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISA 191

Length = 257

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 48.5 bits (116), Expect = 9e-07
 Identities = 35/155 (22%), Positives = 66/155 (42%), Gaps = 20/155 (12%)

Query: 23  GIGRCIVEKL-SQHEAIIIALSKTQAN---------LDSLKQAFPNVQTVQVDLQDWART 72
           GIGR +   L  ++ A ++ L ++            L +L+     V  +  D+ D A  
Sbjct: 216 GIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISADVTDAAAV 275

Query: 73  RAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTM 128
           R  + KV    G +D +I+ A V R         E+  +++    +  ++N++Q ++   
Sbjct: 276 RRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDF-EAVLAPKVDGLLNLAQALADEP 334

Query: 129 IDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD 163
           +D       V  SS++      G   Y+A+ A LD
Sbjct: 335 LDF-----FVLFSSVSAFFGGAGQADYAAANAFLD 364

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 44/191 (23%), Positives = 88/191 (46%), Gaps = 13/191 (6%)

Query: 32  LSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLIN 87
           L+Q + +I++       +D L+QA    Q +Q D    A   A + ++      +  +I+
Sbjct: 23  LAQGQPVIVSYRTHYPAIDGLRQA--GAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80

Query: 88  NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS-IVNVSSIAGK 146
           NA+             +++  +  +++ A   ++  +   +  H    S I++++    +
Sbjct: 81  NAS-DWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVE 139

Query: 147 TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPM 206
              + H  Y+ASKAALD++T + A +L P  ++VNS+ P +++   G     D A     
Sbjct: 140 KGSDKHIAYAASKAALDNMTLSFAAKLAP-EVKVNSIAPALILFNEG----DDAAYRQKA 194

Query: 207 LAKTPLGRFAG 217
           LAK+ L    G
Sbjct: 195 LAKSLLKIEPG 205

Length = 236

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 47.6 bits (113), Expect = 1e-06
 Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 27/171 (15%)

Query: 58  NVQTVQVDLQDWARTRAAVSKV----GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDV 112
           N   + +D+ D A+  A V++V    G +D L+ NAA+A   +  L+       + +  V
Sbjct: 57  NAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAV 116

Query: 113 NIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALE 172
           N+   + +++  +  +  H   G+IVN++S   + +      Y+ASK  L ++T  +A+ 
Sbjct: 117 NLTGPMLLAKHCAPYLRAHN--GAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAIS 174

Query: 173 LGPYNIRVNSVQPTVVMTQMGRTGW---SDPA--KAGPML----AKTPLGR 214
           LGP  IRVN+V P          GW    DP+  +A P+     A+ P GR
Sbjct: 175 LGP-EIRVNAVSP----------GWIDARDPSQRRAEPLSEADHAQHPAGR 214

Length = 255

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 47.5 bits (113), Expect = 1e-06
 Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 44/190 (23%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIG+ IV + +Q   + IA +              NV+      +D  +     +K  P+
Sbjct: 19  GIGKAIVYEFAQ-SGVNIAFTYNS-----------NVEEANKIAEDLEQKYGIKAKAYPL 66

Query: 83  DVL----------------------INNA------AVARFDRFLDIDEENLIDSIFDVNI 114
           ++L                      I+NA       V  + +F+ +  + L ++I+   +
Sbjct: 67  NILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGL-NNIYTATV 125

Query: 115 KAVINISQVVSKTMIDHKI-QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL 173
            A +  +Q  +K M   K+  GSI+++SS      +E +  +  SKAA++++ +  A EL
Sbjct: 126 NAFVVGAQEAAKRM--EKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATEL 183

Query: 174 GPYNIRVNSV 183
           G  NIRVN+V
Sbjct: 184 GEKNIRVNAV 193

Length = 260

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 47.2 bits (113), Expect = 2e-06
 Identities = 20/56 (35%), Positives = 33/56 (58%)

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
           GS++ +S    +  +E + +    KAAL+S  R +A ELGP  IRV+++ P  + T
Sbjct: 142 GSLLTMSYYGAEKVVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKT 197

Length = 258

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 46.5 bits (111), Expect = 2e-06
 Identities = 22/95 (23%), Positives = 40/95 (42%), Gaps = 5/95 (5%)

Query: 107 DSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT 166
           D ++  N+      S + +K ++     G +V   + A      G   Y A+KAA+  +T
Sbjct: 94  DLMWKQNLWTSFIASHLATKHLLSG---GLLVLTGAKAALEPTPGMIGYGAAKAAVHQLT 150

Query: 167 RTMALELG--PYNIRVNSVQPTVVMTQMGRTGWSD 199
           +++A E    P     N++ P  + T   R    D
Sbjct: 151 QSLAAENSGLPAGSTANAILPVTLDTPANRKAMPD 185

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 46.3 bits (110), Expect = 4e-06
 Identities = 36/152 (23%), Positives = 73/152 (48%), Gaps = 31/152 (20%)

Query: 80  GPVDVLINNAAVARFD----RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
           G +D ++++ A A  +     FL+  +E   +   ++++ ++I +++ +   + D     
Sbjct: 82  GKIDFIVHSVAFAPKEALEGSFLETSKEAF-NIAMEISVYSLIELTRALLPLLND---GA 137

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT 195
           S++ +S + G   +  + +   +KAAL+S  R +A++LG   IRVN++            
Sbjct: 138 SVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAIS----------- 186

Query: 196 GWSDPAKAGPM--LAKTPLGRFAGKLKPKPWN 225
                  AGP+  LA + +G F   LK   WN
Sbjct: 187 -------AGPIKTLAASGIGDFRMILK---WN 208

Length = 274

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 45.9 bits (109), Expect = 4e-06
 Identities = 56/230 (24%), Positives = 79/230 (34%), Gaps = 61/230 (26%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG    E L      +I +         L++A      V  DL       AA++ V   
Sbjct: 10  GIGAATAELLEDAGHTVIGID--------LREAD-----VIADLSTPEGRAAAIADVLAR 56

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G +D L+N A V             +   +  VN   +  + + +   +       + 
Sbjct: 57  CSGVLDGLVNCAGVG---------GTTVAGLVLKVNYFGLRALMEALLPRL-RKGHGPAA 106

Query: 138 VNVSSIAG----------KTALE-----------------GHTIYSASKAALDSITRTMA 170
           V VSSIAG            AL                  G+  Y+ SK AL   TR  A
Sbjct: 107 VVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSKEALTVWTRRRA 166

Query: 171 LE-LGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAK---TPLGRFA 216
              L    +RVN+V P  V T + +    DP   G        TP+GR A
Sbjct: 167 ATWLYGAGVRVNTVAPGPVETPILQAFLQDP--RGGESVDAFVTPMGRRA 214

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 45.9 bits (109), Expect = 5e-06
 Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%)

Query: 62  VQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDR----FLDIDEENLIDSIFDVNIKAV 117
           VQ D Q          K G +D+L++  A A  +     F     E    ++ +++  ++
Sbjct: 68  VQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARAL-EISAYSL 126

Query: 118 INISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYN 177
             + +     M +    GSIV ++ + G  A+  + +   +KAAL++  R +A ELGP N
Sbjct: 127 APLCKAAKPLMSE---GGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGPKN 183

Query: 178 IRVNSV 183
           IRVN++
Sbjct: 184 IRVNAI 189

Length = 258

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 45.5 bits (108), Expect = 7e-06
 Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 13/169 (7%)

Query: 22  PGIGRCIVEKLSQHEAIIIAL-----SKTQANLDSLKQAFPNVQT-VQVDLQDWARTRAA 75
            G+G  I  + +  E   +AL     +K +A L  + +        V  D +D     A 
Sbjct: 9   DGLGAAIARRFAA-EGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARDEDEVIAL 67

Query: 76  VSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
              +    GP++VL+ NA    +   L+     + + ++++        ++  +K M+  
Sbjct: 68  FDLIEEEIGPLEVLVYNAGANVWFPILETTPR-VFEKVWEMAAFGGFLAAREAAKRMLAR 126

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRV 180
             +G+I+   + A      G   ++ +K AL ++ ++MA ELGP  I V
Sbjct: 127 G-RGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|236342 PRK08862, PRK08862, short chain dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 8e-06
 Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 11/121 (9%)

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKA---VINISQVVSKTMIDHKIQGSIVN 139
           DVL+NN   +      D   E   +S           +    QV ++ M     +G IVN
Sbjct: 85  DVLVNNWTSSPLPSLFD---EQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVN 141

Query: 140 VSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT--QMGRTGW 197
           V S       +  T   +S A +   T + A EL P+NIRV  V P++     ++    W
Sbjct: 142 VIS---HDDHQDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELDAVHW 198

Query: 198 S 198
           +
Sbjct: 199 A 199

Length = 227

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 44.4 bits (106), Expect = 9e-06
 Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 18/157 (11%)

Query: 23  GIGRCIVEKLSQHEAIIIAL--------SKTQANLDSLKQAFPNVQTVQVDLQDWARTRA 74
           G+GR +   L++  A  + L            A L  L+ A   V  V  D+ D     A
Sbjct: 11  GLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGARVTVVACDVADRDALAA 70

Query: 75  AVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
            ++ +    GP+  +I+ A V        +  E    ++         N+ ++ +   +D
Sbjct: 71  VLAAIPAVEGPLTGVIHAAGVLDDGVLASLTPERF-AAVLAPKAAGAWNLHELTADLPLD 129

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITR 167
                  V  SSIAG     G   Y+A+ A LD++  
Sbjct: 130 F-----FVLFSSIAGVLGSPGQANYAAANAFLDALAE 161

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 9e-06
 Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 9/174 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG      L      + A  + + ++ +L+     ++  Q+D  +     A V++V   
Sbjct: 15  GIGAYCARALQSDGWRVFATCRKEEDVAALEAE--GLEAFQLDYAEPESIAALVAQVLEL 72

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G +D L NN A  +     D+  E L    F+ N     ++++ V   M     QG I
Sbjct: 73  SGGRLDALFNNGAYGQPGAVEDLPTEALRAQ-FEANFFGWHDLTRRVIPVMRKQG-QGRI 130

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
           V  SSI G   ++    Y+ASK A++ ++ T+ +EL    I V+ ++P  + T+
Sbjct: 131 VQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETR 184

Length = 277

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 44.7 bits (106), Expect = 1e-05
 Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 34/195 (17%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLK---------------QAFPNVQTVQVDLQ 67
           GIG+ I  K ++  A ++  +KT      L                +A P +    VD++
Sbjct: 14  GIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGKALPCI----VDIR 69

Query: 68  DWARTRAAVS----KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQV 123
           D  + RAAV     K G +D+L+NNA+       LD   +   D +  VN +     + +
Sbjct: 70  DEDQVRAAVEKAVEKFGGIDILVNNASAISLTGTLDTPMKRY-DLMMGVNTRG----TYL 124

Query: 124 VSKTMIDHKIQGSIVNVSSIAGKTALE-----GHTIYSASKAALDSITRTMALELGPYNI 178
            SK  + +  +    ++ +++    L       HT Y+ +K  +      MA E  P  I
Sbjct: 125 CSKACLPYLKKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCVLGMAEEFKPGGI 184

Query: 179 RVNSVQP-TVVMTQM 192
            VN++ P T + T  
Sbjct: 185 AVNALWPRTAIATAA 199

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.6 bits (105), Expect = 1e-05
 Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 28/149 (18%)

Query: 78  KVGPVDVLINNAAVARFD----RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           K G  D L++  A A  +    R++D   EN  +S+  ++  +++ +S+     M D   
Sbjct: 83  KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSL-HISCYSLLELSRSAEALMHD--- 138

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            GSIV ++    +  +  + +   +KAAL++  + +A ++G  NIRVN++          
Sbjct: 139 GGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAIS--------- 189

Query: 194 RTGWSDPAKAGPM--LAKTPLGRFAGKLK 220
                    AGP+  LA + +G F+  LK
Sbjct: 190 ---------AGPIKTLASSAIGDFSTMLK 209

Length = 260

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 43.3 bits (102), Expect = 4e-05
 Identities = 36/181 (19%), Positives = 70/181 (38%), Gaps = 12/181 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANL-------DSLKQAFPNVQTVQVDLQDWARTRAA 75
           GIGR      +++ A +I L + +  L       +      P    + +        +  
Sbjct: 15  GIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLTCTSENCQQL 74

Query: 76  VSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
             ++      +D +++NA +      L      +   +  VN+ A   ++Q +   ++  
Sbjct: 75  AQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQALLP-LLLK 133

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
              GS+V  SS  G+        Y+ SK A + + + +A E    N+RVN + P    T 
Sbjct: 134 SDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNLRVNCINPGGTRTA 193

Query: 192 M 192
           M
Sbjct: 194 M 194

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 5e-05
 Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 21/176 (11%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSKV 79
           GIG  +    +   A +   S+++  L +  +A      V+T  +D+ D A   A  ++ 
Sbjct: 8   GIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA 67

Query: 80  GPVDVLINNAAVARFD--RFLDI-DEENLIDSIF--DVNIKAVINISQVVSKTMIDHKIQ 134
           GP D ++  AA       R L +   +  +DS F     +     I+             
Sbjct: 68  GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-----------G 116

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
           GS+  VS  A         +  A  AAL+++ R +ALEL P  +RVN+V P +V T
Sbjct: 117 GSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSPGLVDT 170

Length = 230

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 40/159 (25%), Positives = 76/159 (47%), Gaps = 31/159 (19%)

Query: 78  KVGPVDVLINNAAVARFD----RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           K G +D +++    +  D    R++D   +N   ++ D+++ +   ++Q   K M D   
Sbjct: 85  KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTM-DISVYSFTAVAQRAEKLMTD--- 140

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            GSI+ ++    +  +  + +   +KAAL++  + +A++LGP NIRVN++          
Sbjct: 141 GGSILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAIS--------- 191

Query: 194 RTGWSDPAKAGPM--LAKTPLGRFAGKLKPKPWNRWLLP 230
                    AGP+  LA + +G F   LK   WN +  P
Sbjct: 192 ---------AGPIKTLAASGIGDFRYILK---WNEYNAP 218

Length = 272

>gnl|CDD|235527 PRK05599, PRK05599, hypothetical protein; Provisional

 Score = 42.6 bits (100), Expect = 6e-05
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 7/141 (4%)

Query: 59  VQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLD-----IDEENLIDSIFDVN 113
           V  +  D QD    R  V +   +   I+ A VA F    D      DE + ++ I  V+
Sbjct: 51  VHVLSFDAQDLDTHRELVKQTQELAGEISLAVVA-FGILGDQERAETDEAHAVE-IATVD 108

Query: 114 IKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL 173
             A +++  V++  +       +IV  SSIAG  A   + +Y ++KA LD+  + +A  L
Sbjct: 109 YTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDAFCQGLADSL 168

Query: 174 GPYNIRVNSVQPTVVMTQMGR 194
              ++R+   +P  V+  M  
Sbjct: 169 HGSHVRLIIARPGFVIGSMTT 189

Length = 246

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 46/165 (27%), Positives = 62/165 (37%), Gaps = 51/165 (30%)

Query: 62  VQVDLQDWARTRAAVSKV-GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINI 120
           +Q DL D A   AAV+ + G +D L N A V                    V + A +N 
Sbjct: 28  IQADLGDPASIDAAVAALPGRIDALFNIAGVP---------------GTAPVELVARVNF 72

Query: 121 --SQVVSKTMIDHKIQG-SIVNVSSIAG---KTALEGH---------------------- 152
              + +++ ++     G +IVNV+S+AG      LE H                      
Sbjct: 73  LGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVA 132

Query: 153 --TIYSASKAALDSITRTM---ALELGPYNIRVNSVQPTVVMTQM 192
             T Y  SK AL  I  TM       G   IRVN V P  V T +
Sbjct: 133 LATGYQLSKEAL--ILWTMRQAQPWFGARGIRVNCVAPGPVFTPI 175

Length = 241

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%)

Query: 135 GSIVNVSSIAGKTALEGH-TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           G +V +SS++    L G    Y+ASKA + S+   +  EL    I+V++++P  + ++M 
Sbjct: 133 GHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEM- 191

Query: 194 RTGWSDPAKAGPMLAKTPLG 213
               +  AK+ P +  T  G
Sbjct: 192 ----NAKAKSTPFMVDTETG 207

Length = 248

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 9/168 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG     +L +    ++A  +   ++  +         + +DL D      A  +V   
Sbjct: 13  GIGLEAALELKRRGYRVLAACRKPDDVARMNSL--GFTGILLDLDDPESVERAADEVIAL 70

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
               +  L NNA    +     I  + + +  F  N      ++ ++   M+ H  +G I
Sbjct: 71  TDNRLYGLFNNAGFGVYGPLSTISRQQM-EQQFSTNFFGTHQLTMLLLPAMLPHG-EGRI 128

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
           V  SS+ G  +  G   Y+ASK AL++ +  + +EL    I+V+ ++P
Sbjct: 129 VMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEP 176

Length = 256

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 39.4 bits (93), Expect = 4e-04
 Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 18/154 (11%)

Query: 23  GIGRCIVEKLSQHEAIIIAL--------SKTQANLDSLKQAFPNVQTVQVDLQDWARTRA 74
           G+G  +   L++  A  + L         + +A L  L+     V  V  D+ D    RA
Sbjct: 11  GLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGAEVTVVACDVSDRDAVRA 70

Query: 75  AVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
            ++++     P+  +I+ A V R     ++  E+    +    +    N+ +      +D
Sbjct: 71  LLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDF-ARVLAPKVTGAWNLHEATRDRPLD 129

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS 164
                  V  SSIAG     G   Y+A+ A LD+
Sbjct: 130 F-----FVLFSSIAGVLGSPGQANYAAANAFLDA 158

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 34/176 (19%), Positives = 64/176 (36%), Gaps = 28/176 (15%)

Query: 24  IGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVD 83
           IG  +V +L Q    +I L   +   +SL      ++  + DL D       +++V P D
Sbjct: 10  IGSHLVRRLLQEGYEVIVLG-RRRRSESL--NTGRIRFHEGDLTDPDALERLLAEVQP-D 65

Query: 84  VLINNAAVARFDRFLDIDEE----------NLIDSIFDVNIKAVINISQVVSKTM-IDHK 132
            +I+ AA +      +   +           L+++     +K  +  S   S  +  D  
Sbjct: 66  AVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGVKRFVFAS---SSEVYGDVA 122

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
                     I   T L   + Y+A+K A + +    A     Y +R   ++   V
Sbjct: 123 DP-------PITEDTPLGPLSPYAAAKLAAERLVEAYARA---YGLRAVILRLFNV 168

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 32/149 (21%), Positives = 63/149 (42%), Gaps = 26/149 (17%)

Query: 57  PNVQTVQVDLQDWARTRAA----VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDV 112
                V+ D+        A      +VG +D +++  A A         +E L  ++ D 
Sbjct: 55  EEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYA--------KKEELGGNVTDT 106

Query: 113 NIKAVINISQVVS-----------KTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA 161
           + +    ++Q +S           + +++     SIV ++    + A+  + +   +KAA
Sbjct: 107 S-RDGYALAQDISAYSLIAVAKYARPLLNPG--ASIVTLTYFGSERAIPNYNVMGIAKAA 163

Query: 162 LDSITRTMALELGPYNIRVNSVQPTVVMT 190
           L+S  R +A +LG   IRVN++    V T
Sbjct: 164 LESSVRYLARDLGKKGIRVNAISAGAVKT 192

Length = 252

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 49/188 (26%), Positives = 75/188 (39%), Gaps = 31/188 (16%)

Query: 22  PGIGRCIVEKLSQHEA-IIIALSKTQA---NLDSLKQAFPNVQTVQVDLQDWARTRA--- 74
            GIG+   E  ++  A +++A    +A     +  +     V  V  D+ D  + +A   
Sbjct: 17  SGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALAT 76

Query: 75  -AVSKVGPVDVLINNAAVARFDRFLDIDEE--------NLIDSIFDVNIKAVINISQVVS 125
            A S  G +DV +NN  V    RF +   E        NLI  + D +  A + I     
Sbjct: 77  QAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAH--AALPI----- 129

Query: 126 KTMIDHKIQGS--IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPY-NIRVNS 182
                 K QG    +N+ S+ G  A      YSASK  L   +  +  EL  + +I V  
Sbjct: 130 -----FKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCD 184

Query: 183 VQPTVVMT 190
           V P  + T
Sbjct: 185 VYPAFMDT 192

Length = 330

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 30/132 (22%)

Query: 82  VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS----I 137
           +DVLINNA V R         E+  +  F VN     ++   +   ++   ++ S    I
Sbjct: 81  LDVLINNAGVMRCPYSK---TEDGFEMQFGVN-----HLGHFLLTNLLLDLLKKSAPSRI 132

Query: 138 VNVSSIAGKTALEGHT---------------IYSASKAALDSITRTMALELGPYNIRVNS 182
           VNVSS+A K    G                  Y  SK A    TR +A  L    + VN+
Sbjct: 133 VNVSSLAHKA---GKINFDDLNSEKSYNTGFAYCQSKLANVLFTRELARRLQGTGVTVNA 189

Query: 183 VQPTVVMTQMGR 194
           + P VV T++GR
Sbjct: 190 LHPGVVRTELGR 201

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|181162 PRK07904, PRK07904, short chain dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 20/58 (34%), Positives = 32/58 (55%)

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           G I+ +SS+AG+     + +Y ++KA LD     +   L  Y +RV  V+P  V T+M
Sbjct: 139 GQIIAMSSVAGERVRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRM 196

Length = 253

>gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 38.8 bits (91), Expect = 0.001
 Identities = 15/26 (57%), Positives = 19/26 (73%)

Query: 158 SKAALDSITRTMALELGPYNIRVNSV 183
           +KAAL+S  R +A +LGP  IRVN V
Sbjct: 161 AKAALESTNRYLARDLGPRGIRVNLV 186

Length = 256

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 47/231 (20%), Positives = 90/231 (38%), Gaps = 51/231 (22%)

Query: 23  GIGRCIVEKLSQHEAIIIA---LSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK- 78
           GIG+ I  ++   + +++A       +A   +L++A  +V T +VD+      +A  +  
Sbjct: 12  GIGQAIARRVGAGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA 71

Query: 79  --VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
             +GPV  L++ A V+          +   ++I  V++     + +   K +      G+
Sbjct: 72  QTLGPVTGLVHTAGVS--------PSQASPEAILKVDLYGTALVLEEFGKVI---APGGA 120

Query: 137 IVNVSSIAGK---------------TALE----------------GHTIYSASKAALDSI 165
            V ++S +G                T  E                 H  Y  +K A    
Sbjct: 121 GVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHA-YQIAKRANALR 179

Query: 166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAG--PMLAKTPLGR 214
               A++ G    R+NS+ P ++ T + +   + P   G   M AK+P GR
Sbjct: 180 VMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGR 230

Length = 275

>gnl|CDD|217556 pfam03435, Saccharop_dh, Saccharopine dehydrogenase

 Score = 37.7 bits (88), Expect = 0.003
 Identities = 12/68 (17%), Positives = 28/68 (41%), Gaps = 6/68 (8%)

Query: 23 GIGRCIVEKLSQHEAI-IIALSKTQANLDSLKQAF--PNVQTVQVDLQDWARTRAAVSKV 79
          G+G+ +   L++H  + I    ++     +L           + VD  ++    A + + 
Sbjct: 8  GVGQGVAPLLARHGDLEITVADRSLEKAQALAAPKLGLRFIAIAVDADNYEALVALLKE- 66

Query: 80 GPVDVLIN 87
             D++IN
Sbjct: 67 --GDLVIN 72

This family comprised of three structural domains that can not be separated in the linear sequence. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase. The saccharopine dehydrogenase can also function as a saccharopine reductase. Length = 380

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	238
KOG1200|consensus	256		100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
KOG1207|consensus	245		100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1205|consensus	282		100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG0725|consensus	270		100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
KOG1201|consensus	300		100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1610|consensus	322		100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1209|consensus	289		100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK12829	264	short chain dehydrogenase; Provisional	99.98
PRK08251	248	short chain dehydrogenase; Provisional	99.98
PRK08324	681	short chain dehydrogenase; Validated	99.98
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.98
KOG1208|consensus	314		99.98
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.97
PRK06197	306	short chain dehydrogenase; Provisional	99.97
KOG1611|consensus	249		99.97
PRK09135	249	pteridine reductase; Provisional	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK07326	237	short chain dehydrogenase; Provisional	99.97
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK07806	248	short chain dehydrogenase; Provisional	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.97
PRK07201	657	short chain dehydrogenase; Provisional	99.97
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.97
PRK12828	239	short chain dehydrogenase; Provisional	99.97
KOG4169|consensus	261		99.97
KOG1210|consensus	331		99.97
PRK08264	238	short chain dehydrogenase; Validated	99.97
KOG1014|consensus	312		99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
KOG1199|consensus	260		99.96
PRK06953	222	short chain dehydrogenase; Provisional	99.96
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.96
KOG1204|consensus	253		99.94
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.94
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.92
PLN03209	576	translocon at the inner envelope of chloroplast su	99.91
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.9
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.88
KOG1478|consensus	341		99.87
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.85
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.85
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.84
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.82
PLN02650	351	dihydroflavonol-4-reductase	99.82
PLN00198	338	anthocyanidin reductase; Provisional	99.81
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.81
PLN02583	297	cinnamoyl-CoA reductase	99.8
PLN02653	340	GDP-mannose 4,6-dehydratase	99.79
PLN02572	442	UDP-sulfoquinovose synthase	99.78
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.78
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.76
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.76
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.76
PLN02214	342	cinnamoyl-CoA reductase	99.75
PRK06720	169	hypothetical protein; Provisional	99.75
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.73
KOG1502|consensus	327		99.73
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.72
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.72
PLN02686	367	cinnamoyl-CoA reductase	99.72
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.69
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.69
PLN02240	352	UDP-glucose 4-epimerase	99.67
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.67
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.67
PLN02427	386	UDP-apiose/xylose synthase	99.66
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.66
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.65
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.64
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.64
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.62
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.62
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.62
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.61
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.58
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.55
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.55
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.54
PLN02260	668	probable rhamnose biosynthetic enzyme	99.54
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.53
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.53
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.52
KOG4022|consensus	236		99.51
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.51
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.5
KOG1371|consensus	343		99.49
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.48
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.46
CHL00194	317	ycf39 Ycf39; Provisional	99.44
PLN02206	442	UDP-glucuronate decarboxylase	99.43
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.43
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.39
PRK07201	657	short chain dehydrogenase; Provisional	99.37
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.33
PRK05865	854	hypothetical protein; Provisional	99.32
PLN02996	491	fatty acyl-CoA reductase	99.3
PLN02778	298	3,5-epimerase/4-reductase	99.29
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.28
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.15
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.15
KOG1430|consensus	361		99.14
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.11
PLN02260	668	probable rhamnose biosynthetic enzyme	99.09
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.06
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.05
PLN02503	605	fatty acyl-CoA reductase 2	99.04
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.01
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.96
PRK08309	177	short chain dehydrogenase; Provisional	98.9
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.9
KOG0747|consensus	331		98.89
PLN00016	378	RNA-binding protein; Provisional	98.84
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.83
KOG1429|consensus	350		98.82
PRK12320	699	hypothetical protein; Provisional	98.77
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.72
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.69
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.53
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.52
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.49
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.49
KOG1372|consensus	376		98.41
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.39
KOG1202|consensus	2376		98.39
KOG1203|consensus	411		98.38
COG2910	211	Putative NADH-flavin reductase [General function p	98.37
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.35
KOG1431|consensus	315		98.23
KOG2865|consensus	391		98.21
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.17
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.11
KOG1221|consensus	467		98.08
PLN00106	323	malate dehydrogenase	98.02
PRK09620	229	hypothetical protein; Provisional	97.91
PTZ00325	321	malate dehydrogenase; Provisional	97.77
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.77
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.77
PRK14982	340	acyl-ACP reductase; Provisional	97.72
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.64
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.57
KOG2774|consensus	366		97.56
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.51
KOG2733|consensus	423		97.48
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.37
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.32
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.31
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.22
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.21
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.2
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.16
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.16
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.15
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.14
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.11
PRK06849	389	hypothetical protein; Provisional	97.1
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.08
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.04
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.04
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.03
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.03
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	97.0
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.0
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.99
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.92
KOG1198|consensus	347		96.9
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.89
PRK05086	312	malate dehydrogenase; Provisional	96.87
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.87
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.84
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.82
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.78
KOG4039|consensus	238		96.77
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	96.74
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.72
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.71
COG3268	382	Uncharacterized conserved protein [Function unknow	96.7
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.7
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.62
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.61
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.59
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.59
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.53
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.5
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.5
PLN00112	444	malate dehydrogenase (NADP); Provisional	96.48
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.46
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.44
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.43
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.4
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.4
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.38
PRK09496	453	trkA potassium transporter peripheral membrane com	96.37
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.37
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.37
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.27
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.27
PRK09496	453	trkA potassium transporter peripheral membrane com	96.26
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.24
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.22
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.05
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.01
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	96.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.0
PLN00203	519	glutamyl-tRNA reductase	95.95
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	95.95
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.94
PRK08306	296	dipicolinate synthase subunit A; Reviewed	95.94
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.93
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.91
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.91
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	95.9
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.89
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.88
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	95.87
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	95.87
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	95.86
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.86
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	95.84
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.75
PLN02602	350	lactate dehydrogenase	95.73
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.66
COG2130	340	Putative NADP-dependent oxidoreductases [General f	95.66
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.66
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.66
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.63
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.6
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.58
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.55
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.52
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.51
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	95.48
KOG0023|consensus	360		95.47
PRK05442	326	malate dehydrogenase; Provisional	95.44
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.44
PRK04148	134	hypothetical protein; Provisional	95.44
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.41
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	95.39
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.36
PLN02740	381	Alcohol dehydrogenase-like	95.33
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	95.26
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.24
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	95.23
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.21
PTZ00354	334	alcohol dehydrogenase; Provisional	95.2
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.17
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	95.11
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.11
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.08
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.08
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	95.07
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.03
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.02
PRK10669	558	putative cation:proton antiport protein; Provision	94.99
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	94.94
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	94.94
PRK13771	334	putative alcohol dehydrogenase; Provisional	94.93
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	94.92
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.91
PTZ00117	319	malate dehydrogenase; Provisional	94.9
PLN02178	375	cinnamyl-alcohol dehydrogenase	94.87
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.83
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	94.76
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	94.69
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.68
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	94.65
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	94.63
PLN02827	378	Alcohol dehydrogenase-like	94.57
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	94.57
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	94.56
KOG4288|consensus	283		94.52
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	94.52
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	94.5
PRK08655	437	prephenate dehydrogenase; Provisional	94.44
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	94.41
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.41
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	94.39
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	94.35
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	94.32
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	94.29
PRK08223	287	hypothetical protein; Validated	94.24
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	94.18
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	94.08
PRK06223	307	malate dehydrogenase; Reviewed	94.08
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	94.05
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.04
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	94.03
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.03
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.95
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	93.94
PRK14968	188	putative methyltransferase; Provisional	93.94
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	93.83
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	93.83
COG5322	351	Predicted dehydrogenase [General function predicti	93.8
KOG1196|consensus	343		93.8
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	93.79
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	93.75
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	93.72
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	93.7
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	93.65
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	93.63
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	93.63
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	93.57
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	93.45
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	93.39
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	93.35
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	93.32
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.28
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	93.24
cd08252	336	AL_MDR Arginate lyase and other MDR family members	93.23
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	93.17
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	93.1
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	93.09
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	93.08
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	93.06
COG4123	248	Predicted O-methyltransferase [General function pr	92.98
KOG0409|consensus	327		92.97
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	92.94
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	92.89
PRK03659	601	glutathione-regulated potassium-efflux system prot	92.88
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	92.84
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	92.83

>KOG1200|consensus

Probab=100.00  E-value=8.9e-47  Score=278.36  Aligned_cols=221  Identities=27%  Similarity=0.347  Sum_probs=198.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC---CceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP---NVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      +.++..+|||++|||++++..|+++|++|++.+++.+..++....++   +...+.||++++++++..+++    +|+|+
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps   92 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS   92 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence            56688899999999999999999999999999999988887776664   467789999999999886655    48999


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK-IQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      +++||||+....-+..+..++ |+..+.+|+.+.|.++|++.+.+...+ .+.+||++||+.+..+.-++..|+++|+++
T Consensus        93 vlVncAGItrD~~Llrmkq~q-wd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~Gv  171 (256)
T KOG1200|consen   93 VLVNCAGITRDGLLLRMKQEQ-WDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGV  171 (256)
T ss_pred             EEEEcCccccccceeeccHHH-HHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCce
Confidence            999999999888888888887 999999999999999999999865543 245999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGL  234 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~  234 (238)
                      .+|+|+.++|++.+|||||.|.||++.|||++..  ++...+.+....|++|++++||+|+.++||+|+...
T Consensus       172 IgftktaArEla~knIrvN~VlPGFI~tpMT~~m--p~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ss  241 (256)
T KOG1200|consen  172 IGFTKTAARELARKNIRVNVVLPGFIATPMTEAM--PPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASS  241 (256)
T ss_pred             eeeeHHHHHHHhhcCceEeEeccccccChhhhhc--CHHHHHHHHccCCccccCCHHHHHHHHHHHhccccc
Confidence            9999999999999999999999999999999873  566777888999999999999999999999998543

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=1.5e-45  Score=283.70  Aligned_cols=220  Identities=24%  Similarity=0.302  Sum_probs=192.5

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC--CceEEEeecCCHHHHHHHH----HhcCCcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP--NVQTVQVDLQDWARTRAAV----SKVGPVD   83 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~----~~~g~id   83 (238)
                      .+.++++|||||||||.++|++|++.|++|+++.|+.++++++..+++  .+.....|++|.+++++++    ++++++|
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence            344899999999999999999999999999999999999999999987  4888999999999976666    4569999


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||....+++.+.+.++ |++|+++|++|.++.+++.+|.|.+++ .|.||++||++|..++++...|+++|+++.
T Consensus        84 iLvNNAGl~~g~~~~~~~~~d-w~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~  161 (246)
T COG4221          84 ILVNNAGLALGDPLDEADLDD-WDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPYPGGAVYGATKAAVR  161 (246)
T ss_pred             EEEecCCCCcCChhhhCCHHH-HHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccCCCCccchhhHHHHH
Confidence            999999988778999999998 999999999999999999999999988 789999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .|.+.|+.|+..++|||..|+||.+.|+........ ...+.+.+..--....+|+|||+++.|.++++
T Consensus       162 ~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~-g~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P  229 (246)
T COG4221         162 AFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFE-GDDERADKVYKGGTALTPEDIAEAVLFAATQP  229 (246)
T ss_pred             HHHHHHHHHhcCCCeeEEEecCceecceecccccCC-chhhhHHHHhccCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999988765432211 11112222222345679999999999999885

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-44  Score=289.32  Aligned_cols=220  Identities=19%  Similarity=0.266  Sum_probs=191.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeecCCHHHHHHHHHhc---CCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVSKV---GPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~---g~i   82 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.++++++.++.     .++.++++|++|+++++++++++   |++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            4578899999999999999999999999999999988876655432     35788999999999998888654   889


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||+|.....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|+++|+|+
T Consensus        87 D~lv~nag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~~~~~~~y~asKaal  164 (263)
T PRK08339         87 DIFFFSTGGPKPGYFMEMSMED-WEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEPIPNIALSNVVRISM  164 (263)
T ss_pred             cEEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCCCCcchhhHHHHHHH
Confidence            9999999987767778888888 999999999999999999999998776 68999999999988888899999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC---------CCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW---------SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+|+++++.|++++|||||+|+||+++|++.....         ..++..+.+....|++|+++|+|+|+++.||+|+.
T Consensus       165 ~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~~  243 (263)
T PRK08339        165 AGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASDL  243 (263)
T ss_pred             HHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcch
Confidence            99999999999999999999999999999854311         11222233456689999999999999999999974

>KOG1207|consensus

Probab=100.00  E-value=1.1e-44  Score=262.83  Aligned_cols=221  Identities=43%  Similarity=0.603  Sum_probs=209.5

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCC-ceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN-VQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      .+++++||+..|||+++++.|+..|++|+++.|+++++.++.++++. +..++.|+++++.+.+.+..++++|.++||||
T Consensus         7 G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNAg   86 (245)
T KOG1207|consen    7 GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNAG   86 (245)
T ss_pred             ceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccch
Confidence            34567799999999999999999999999999999999999999987 88889999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHH
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMA  170 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~  170 (238)
                      +....++.+.+.++ |++.+++|+++.+.+.|.....+..+..+|.||++||.++..+..++..||++|+|+++++|+++
T Consensus        87 vA~~~pf~eiT~q~-fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~lA  165 (245)
T KOG1207|consen   87 VATNHPFGEITQQS-FDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKCLA  165 (245)
T ss_pred             hhhcchHHHHhHHh-hcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHHHHH
Confidence            99888999999998 99999999999999999987777777668999999999999999999999999999999999999


Q ss_pred             HHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        171 LELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       171 ~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      .|+++++||||++.|-.+.|.|.++.|.++...+++..+.|++|+.+.+|+.+++.||+|+..
T Consensus       166 lELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  166 LELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNS  228 (245)
T ss_pred             HhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCc
Confidence            999999999999999999999999999999999999999999999999999999999999953

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.3e-43  Score=285.30  Aligned_cols=218  Identities=20%  Similarity=0.210  Sum_probs=181.7

Q ss_pred             CcCCCCCCCCCC--chHHHHHHHHhhCCCEEEEecCChHh---HHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKP--GIGRCIVEKLSQHEAIIIALSKTQAN---LDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~--gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||++  |||+++|++|+++|++|++++|+.+.   .+++.+..+....+++|++|++++++++++    +|+
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            457899999997  99999999999999999999988643   334433333345789999999999888765    489


Q ss_pred             ccEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhH
Q psy14567         82 VDVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSA  157 (238)
Q Consensus        82 id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~  157 (238)
                      +|++|||||+...    .++.+.+.++ |++++++|+.+++.++++++|+|.+   +|+||++||..+..+.+++.+|++
T Consensus        86 iD~lVnnAG~~~~~~~~~~~~~~~~~~-~~~~~~vn~~~~~~l~~~~~~~m~~---~G~Iv~isS~~~~~~~~~~~~Y~a  161 (271)
T PRK06505         86 LDFVVHAIGFSDKNELKGRYADTTREN-FSRTMVISCFSFTEIAKRAAKLMPD---GGSMLTLTYGGSTRVMPNYNVMGV  161 (271)
T ss_pred             CCEEEECCccCCCccccCChhhcCHHH-HHHHHhhhhhhHHHHHHHHHHhhcc---CceEEEEcCCCccccCCccchhhh
Confidence            9999999998643    3566778887 9999999999999999999999963   489999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+|+.+|+++++.|++++|||||+|+||+++|++........+.........|++|+++|+|+|++++||+|+.
T Consensus       162 sKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~  236 (271)
T PRK06505        162 AKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDL  236 (271)
T ss_pred             hHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999986432111111222334579999999999999999999974

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=1.2e-42  Score=274.89  Aligned_cols=217  Identities=23%  Similarity=0.318  Sum_probs=193.3

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCC-----ceEEEeecCCHHHHHHHHHhc---
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN-----VQTVQVDLQDWARTRAAVSKV---   79 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~D~~~~~~v~~~~~~~---   79 (238)
                      ..++.++++|||||+|||.++|+.|+++|++|+++.|++++++++.++..+     +.++++|+++++++..+.+++   
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence            456788999999999999999999999999999999999999988877753     678999999999998887654   


Q ss_pred             -CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHH
Q psy14567         80 -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        80 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                       +.+|++|||||+..++++.+.+.++ .++++++|+.+...++++++|.|.+++ .|.||+|+|.++..+.|....|++|
T Consensus        82 ~~~IdvLVNNAG~g~~g~f~~~~~~~-~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~p~~avY~AT  159 (265)
T COG0300          82 GGPIDVLVNNAGFGTFGPFLELSLDE-EEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPTPYMAVYSAT  159 (265)
T ss_pred             CCcccEEEECCCcCCccchhhCChHH-HHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCcchHHHHHH
Confidence             5799999999999999999999998 899999999999999999999999988 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++.+|.++|+.|++++||+|..++||++.|++....      ........|...+.+|+++|+..++.+...
T Consensus       160 Ka~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~------~~~~~~~~~~~~~~~~~~va~~~~~~l~~~  227 (265)
T COG0300         160 KAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAK------GSDVYLLSPGELVLSPEDVAEAALKALEKG  227 (265)
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccc------ccccccccchhhccCHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999997521      111122335667889999999988887663

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.2e-43  Score=282.62  Aligned_cols=218  Identities=18%  Similarity=0.142  Sum_probs=183.8

Q ss_pred             CcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         11 RTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      +.++++||||+  +|||+++|++|+++|++|++++|+....+.+.+.. ..+..+++|++|++++++++++    +|++|
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD   85 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID   85 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            45689999999  89999999999999999999999854333333222 2477899999999999887755    48999


Q ss_pred             EEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         84 VLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        84 ~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      ++|||||+..+    .++.+.+.++ |++.+++|+.+++.++++++|.|.+   +|+||++||..+..+.+++.+|+++|
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~~~~~-~~~~~~in~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~~~~~~~~Y~asK  161 (252)
T PRK06079         86 GIVHAIAYAKKEELGGNVTDTSRDG-YALAQDISAYSLIAVAKYARPLLNP---GASIVTLTYFGSERAIPNYNVMGIAK  161 (252)
T ss_pred             EEEEcccccccccccCCcccCCHHH-HHHHhCcccHHHHHHHHHHHHhccc---CceEEEEeccCccccCCcchhhHHHH
Confidence            99999998653    5667788888 9999999999999999999999963   47999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+.+|+++++.|++++|||||+|+||+++|++.......++..+......|++|+++|+|+|+++.||+|+.
T Consensus       162 aal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~  234 (252)
T PRK06079        162 AALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDL  234 (252)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999986543222233334456679999999999999999999874

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-43  Score=280.69  Aligned_cols=222  Identities=25%  Similarity=0.332  Sum_probs=189.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh--HHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      ..++++||||++|||+++|++|+++|++|++++|+...  .+++.+...++.++++|+++++++++++++    +|++|+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            45788999999999999999999999999999887532  223333334678899999999999888865    489999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++.+|+||++||..+..+.++...|++||+++++
T Consensus        87 lv~~ag~~~~~~~~~~~~~~-~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~  165 (251)
T PRK12481         87 LINNAGIIRRQDLLEFGNKD-WDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMG  165 (251)
T ss_pred             EEECCCcCCCCCcccCCHHH-HHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHH
Confidence            99999988777777788887 99999999999999999999999876545899999999998888888999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      ++++++.|++++|||||+|+||+++|++.......++..+......|++|+++|+|+|+++.||+|+..
T Consensus       166 l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~  234 (251)
T PRK12481        166 LTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSAS  234 (251)
T ss_pred             HHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999876533222223344566799999999999999999999743

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9e-43  Score=283.67  Aligned_cols=218  Identities=16%  Similarity=0.189  Sum_probs=181.6

Q ss_pred             CcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCCh---HhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         11 RTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKTQ---ANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        11 ~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      +.++++||||+  +|||+++|++|+++|++|++++|+.   +.++++.++.+....+++|++|+++++++++++    |+
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            45789999997  8999999999999999999999985   345555544432267899999999998887654    89


Q ss_pred             ccEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhH
Q psy14567         82 VDVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSA  157 (238)
Q Consensus        82 id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~  157 (238)
                      +|++|||||+...    .++.+.+.++ |++++++|+.+++.+++.++|.|.+   +|+||++||..+..+.+....|++
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv~isS~~~~~~~~~~~~Y~a  159 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEA-FNIAMEISVYSLIELTRALLPLLND---GASVLTLSYLGGVKYVPHYNVMGV  159 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHH-HHHHhhhhhHHHHHHHHHHHHHhcc---CCcEEEEecCCCccCCCcchhhhh
Confidence            9999999998642    4567778887 9999999999999999999999964   479999999998888888899999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ||+|+.+|+++++.|++++|||||+|+||+++|++..................|++|+++|+|+|+++.||+|+.
T Consensus       160 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~  234 (274)
T PRK08415        160 AKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDL  234 (274)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhh
Confidence            999999999999999999999999999999999875432111111111234569999999999999999999973

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2e-42  Score=279.82  Aligned_cols=218  Identities=18%  Similarity=0.211  Sum_probs=181.7

Q ss_pred             CcCCCCCCCCCC--chHHHHHHHHhhCCCEEEEecCChH---hHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKP--GIGRCIVEKLSQHEAIIIALSKTQA---NLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~--gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||++  |||+++|+.|+++|++|++.+|+..   .++++.++.+....+++|++|++++++++++    +|+
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457899999998  9999999999999999999988742   3444544433334678999999999888754    489


Q ss_pred             ccEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhH
Q psy14567         82 VDVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSA  157 (238)
Q Consensus        82 id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~  157 (238)
                      +|++|||||+...    .++.+.+.++ |++.+++|+.+++.+++++.|.|.+   +|+||++||..+..+.+....|++
T Consensus        87 iDilVnnag~~~~~~~~~~~~~~~~~~-~~~~~~vn~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~~~~~~~~Y~a  162 (260)
T PRK06603         87 FDFLLHGMAFADKNELKGRYVDTSLEN-FHNSLHISCYSLLELSRSAEALMHD---GGSIVTLTYYGAEKVIPNYNVMGV  162 (260)
T ss_pred             ccEEEEccccCCcccccCccccCCHHH-HHHHHHHHHHHHHHHHHHHHhhhcc---CceEEEEecCccccCCCcccchhh
Confidence            9999999997642    4566778887 9999999999999999999999953   489999999998888888899999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ||+|+.+|+++++.|++++|||||+|+||+++|++.......++..+......|++|+++|+|+|+++.||+|+.
T Consensus       163 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~  237 (260)
T PRK06603        163 AKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSEL  237 (260)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999986432111222233445679999999999999999999974

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-42  Score=280.26  Aligned_cols=220  Identities=15%  Similarity=0.119  Sum_probs=181.8

Q ss_pred             CCcCCCCCCCC--CCchHHHHHHHHhhCCCEEEEecCCh---HhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         10 DRTNTKGGDYP--KPGIGRCIVEKLSQHEAIIIALSKTQ---ANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        10 ~~~~v~~itG~--s~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      .+.++++||||  ++|||+++|++|+++|++|++++|+.   +.++++.+..+....++||++|++++++++++    +|
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            34568899997  67999999999999999999987764   33445544444556789999999999888754    48


Q ss_pred             CccEEEEccCCCCCC----C-CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchh
Q psy14567         81 PVDVLINNAAVARFD----R-FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIY  155 (238)
Q Consensus        81 ~id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y  155 (238)
                      ++|++|||||+....    + +.+.+.++ |+.++++|+.++++++++++|.|.++  +|+||++||..+..+.++...|
T Consensus        84 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~-~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~iss~~~~~~~~~~~~Y  160 (261)
T PRK08690         84 GLDGLVHSIGFAPKEALSGDFLDSISREA-FNTAHEISAYSLPALAKAARPMMRGR--NSAIVALSYLGAVRAIPNYNVM  160 (261)
T ss_pred             CCcEEEECCccCCccccccchhhhcCHHH-HHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEEEcccccccCCCCcccc
Confidence            999999999987432    1 23456666 99999999999999999999998654  4899999999988888889999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+|+.+|+++++.|++++|||||+|+||+++|++.......++..+.+....|++|+++|+|+|+++.||+++.
T Consensus       161 ~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~  237 (261)
T PRK08690        161 GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDL  237 (261)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999999986543222233333455679999999999999999999974

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=2.3e-42  Score=279.18  Aligned_cols=218  Identities=21%  Similarity=0.240  Sum_probs=183.8

Q ss_pred             CcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCC------hHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc---
Q psy14567         11 RTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKT------QANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV---   79 (238)
Q Consensus        11 ~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~------~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~---   79 (238)
                      +.++++||||+  +|||+++|++|++.|++|++..|+      ++.++++.+......++++|++|+++++++++++   
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            45788999986  899999999999999999887543      3445556555455678899999999998887654   


Q ss_pred             -CCccEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCch
Q psy14567         80 -GPVDVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTI  154 (238)
Q Consensus        80 -g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  154 (238)
                       |++|++|||||+...    .++.+.+.++ |++++++|+.+++.++++++|.|.+   +|+||++||..+..+.++...
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~-~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~  160 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREG-FARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGGVRAIPNYNV  160 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHH-HHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEeccccccCCcccch
Confidence             899999999997642    4567778887 9999999999999999999999964   479999999999888889999


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++|+|+.+|+++++.|++++||+||+|+||+++|++.......++..+......|++|+++|+|+++++.||+|+.
T Consensus       161 Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~  238 (258)
T PRK07370        161 MGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDL  238 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChh
Confidence            999999999999999999999999999999999999986432212233344455679999999999999999999974

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.7e-42  Score=277.44  Aligned_cols=219  Identities=19%  Similarity=0.225  Sum_probs=184.8

Q ss_pred             CCcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCChHh---HHHHHhhCCCceEEEeecCCHHHHHHHHHhc----C
Q psy14567         10 DRTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKTQAN---LDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----G   80 (238)
Q Consensus        10 ~~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g   80 (238)
                      .+.++++||||+  +|||+++|++|+++|++|++++|+.+.   ++++.++.+...+++||++|+++++++++++    |
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   87 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG   87 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence            356789999998  599999999999999999999998643   4555555555668899999999998887654    8


Q ss_pred             CccEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         81 PVDVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        81 ~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                      ++|++|||||+...    .++.+.+.++ |++++++|+.+++.+++.++|.|.+   +|+|+++||..+..+.+....|+
T Consensus        88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~-~~~~~~vN~~~~~~~~~~~~p~m~~---~g~Ii~iss~~~~~~~~~~~~Y~  163 (258)
T PRK07533         88 RLDFLLHSIAFAPKEDLHGRVVDCSREG-FALAMDVSCHSFIRMARLAEPLMTN---GGSLLTMSYYGAEKVVENYNLMG  163 (258)
T ss_pred             CCCEEEEcCccCCcccccCCcccCCHHH-HHHHHhhhhHHHHHHHHHHHHHhcc---CCEEEEEeccccccCCccchhhH
Confidence            99999999998643    4566777887 9999999999999999999999953   47999999998888888889999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++|+|+.+|+++++.|++++||+||+|+||+++|+|.+.....++..+......|++|+++|+|+|++++||+|+.
T Consensus       164 asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~~  239 (258)
T PRK07533        164 PVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASDA  239 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhChh
Confidence            9999999999999999999999999999999999986542211222233445679999999999999999999974

>KOG1205|consensus

Probab=100.00  E-value=5.9e-42  Score=272.85  Aligned_cols=186  Identities=27%  Similarity=0.390  Sum_probs=164.6

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CC-ceEEEeecCCHHHHHHHH----
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PN-VQTVQVDLQDWARTRAAV----   76 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~-~~~~~~D~~~~~~v~~~~----   76 (238)
                      +...+.+|++|||||+|||.++|++|++.|++++++.|+..+++.+.+++     +. +..++||++|++++++++    
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            34457889999999999999999999999999999988887777663333     24 889999999999998887    


Q ss_pred             HhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         77 SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        77 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                      +++|++|+||||||+.......+.+.++ +..+|++|++|++.++++++|+|++++ .|+||++||++|+.+.|....|+
T Consensus        87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~-~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P~~~~Y~  164 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLVGFLEDTDIED-VRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLPFRSIYS  164 (282)
T ss_pred             HhcCCCCEEEecCccccccccccCcHHH-HHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCCcccccc
Confidence            4569999999999999855555566666 999999999999999999999999987 79999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCC--eEEEEEeCCceecCcccC
Q psy14567        157 ASKAALDSITRTMALELGPYN--IRVNSVQPTVVMTQMGRT  195 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~--i~v~~i~PG~v~t~~~~~  195 (238)
                      +||+|+++|+.+|+.|+.+++  |++ .|+||+|+|++...
T Consensus       165 ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  165 ASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGK  204 (282)
T ss_pred             hHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccch
Confidence            999999999999999999877  666 99999999997654

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.6e-42  Score=276.13  Aligned_cols=218  Identities=15%  Similarity=0.132  Sum_probs=180.0

Q ss_pred             CcCCCCCCCC--CCchHHHHHHHHhhCCCEEEEecCC---hHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYP--KPGIGRCIVEKLSQHEAIIIALSKT---QANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~--s~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||  ++|||+++|++|+++|++|++++|.   .+.++++.++.+....+++|++|++++++++++    +|+
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            4578899996  6899999999999999999987643   455666655555555789999999999888865    489


Q ss_pred             ccEEEEccCCCCCC----C-CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         82 VDVLINNAAVARFD----R-FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        82 id~li~~ag~~~~~----~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                      +|++|||||+....    + +.+.+.++ |++.+++|+.+++.++++++|+|.+   +|+||++||..+..+.++..+|+
T Consensus        85 iD~lvnnAG~~~~~~~~~~~~~~~~~~~-~~~~~~iN~~~~~~l~~~~lp~m~~---~g~Ii~iss~~~~~~~~~~~~Y~  160 (260)
T PRK06997         85 LDGLVHSIGFAPREAIAGDFLDGLSREN-FRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAERVVPNYNTMG  160 (260)
T ss_pred             CcEEEEccccCCccccccccchhcCHHH-HHHHHHhhhHHHHHHHHHHHHhcCC---CceEEEEeccccccCCCCcchHH
Confidence            99999999986432    2 23466677 9999999999999999999999942   47999999999888888889999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +||+|+.+|+++++.|++++|||||+|+||+++|++.......++..+......|++|+++|+|+++++.||+|+.
T Consensus       161 asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~  236 (260)
T PRK06997        161 LAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDL  236 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999876432211222223345679999999999999999999974

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-41  Score=276.82  Aligned_cols=217  Identities=18%  Similarity=0.193  Sum_probs=181.3

Q ss_pred             cCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCCh---HhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         12 TNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKTQ---ANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        12 ~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      .++++||||+  +|||+++|+.|+++|++|++++|+.   ++++++.++.+....+++|++|++++++++++    +|++
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   89 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKL   89 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            3689999997  8999999999999999999998874   44555655555566789999999999888765    4899


Q ss_pred             cEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHH
Q psy14567         83 DVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        83 d~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      |++|||||+...    .++.+.+.++ |++++++|+.+++.++++++|.|.+   +|+||++||..+..+.++...|++|
T Consensus        90 D~lv~nAG~~~~~~~~~~~~~~~~~~-~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~~~p~~~~Y~as  165 (272)
T PRK08159         90 DFVVHAIGFSDKDELTGRYVDTSRDN-FTMTMDISVYSFTAVAQRAEKLMTD---GGSILTLTYYGAEKVMPHYNVMGVA  165 (272)
T ss_pred             cEEEECCcccCccccccCcccCCHHH-HHHHHhHHHHHHHHHHHHHHHhcCC---CceEEEEeccccccCCCcchhhhhH
Confidence            999999998642    4566778887 9999999999999999999999853   4899999999888888889999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+|+.+|+++++.|++++|||||+|+||+++|++..................|++|+++|+|+|+++.||+|+.
T Consensus       166 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~  239 (272)
T PRK08159        166 KAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDL  239 (272)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999886432111111111223579999999999999999999974

>KOG0725|consensus

Probab=100.00  E-value=4.1e-41  Score=271.32  Aligned_cols=223  Identities=29%  Similarity=0.377  Sum_probs=186.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-------CCceEEEeecCCHHHHHHHH----Hh
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAAV----SK   78 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~----~~   78 (238)
                      ...+|++|||+++|||+++|++|++.|++|++++|+++.+++.....       +.+..+.||+++++++++++    ++
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            46778999999999999999999999999999999999877765542       24788999999999887766    44


Q ss_pred             -cCCccEEEEccCCCCCC-CCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccCCceEEEEccccccccCCCC-ch
Q psy14567         79 -VGPVDVLINNAAVARFD-RFLDIDEENLIDSIFDVNIKA-VINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGH-TI  154 (238)
Q Consensus        79 -~g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-~~  154 (238)
                       +|++|++|||||..... +..+.+.++ |++++++|+.+ .+.+.+.+.|.+.+++ +|.|+++||..+..+..+. .+
T Consensus        86 ~~GkidiLvnnag~~~~~~~~~~~s~e~-~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-gg~I~~~ss~~~~~~~~~~~~~  163 (270)
T KOG0725|consen   86 FFGKIDILVNNAGALGLTGSILDLSEEV-FDKIMATNLRGSAFCLKQAARPMLKKSK-GGSIVNISSVAGVGPGPGSGVA  163 (270)
T ss_pred             hCCCCCEEEEcCCcCCCCCChhhCCHHH-HHHHHhhhchhHHHHHHHHHHHHHHhcC-CceEEEEeccccccCCCCCccc
Confidence             58999999999988655 688899998 99999999995 6666666777776655 7999999999988775555 79


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC---CCccCC--cccCCCCCCcCCCCCccccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD---PAKAGP--MLAKTPLGRFAGKLKPKPWNRWLL  229 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~---~~~~~~--~~~~~~~~r~~~~~~ia~~~~~l~  229 (238)
                      |+++|+|+++|+|+++.|+.++|||||+|.||++.|++.......   +++.+.  .....|++|+++|+|+++.+.||+
T Consensus       164 Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla  243 (270)
T KOG0725|consen  164 YGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLA  243 (270)
T ss_pred             chhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhhc
Confidence            999999999999999999999999999999999999983222222   223332  445679999999999999999999


Q ss_pred             ccccc
Q psy14567        230 PSVGL  234 (238)
Q Consensus       230 s~~~~  234 (238)
                      ++...
T Consensus       244 ~~~as  248 (270)
T KOG0725|consen  244 SDDAS  248 (270)
T ss_pred             Ccccc
Confidence            99654

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-41  Score=275.18  Aligned_cols=220  Identities=27%  Similarity=0.380  Sum_probs=189.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      +.++++||||++|||++++++|+++|++|++++|+.++.+++.++.      .++.++++|+++++++++++++    ++
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3467899999999999999999999999999999988877665443      2477899999999999887765    48


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||.....+..+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++..+|+++|+
T Consensus        86 ~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sKa  163 (260)
T PRK07063         86 PLDVLVNNAGINVFADPLAMTDED-WRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKIIPGCFPYPVAKH  163 (260)
T ss_pred             CCcEEEECCCcCCCCChhhCCHHH-HHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccCCCCchHHHHHHH
Confidence            899999999987666666777777 999999999999999999999998766 689999999999888888899999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC---CCC-ccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS---DPA-KAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~---~~~-~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++++.+++++|||||+|+||+++|++....+.   .++ .........|++|+++|+|+|++++||+++.
T Consensus       164 a~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~  239 (260)
T PRK07063        164 GLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDE  239 (260)
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999998754321   111 2223445679999999999999999999974

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-41  Score=274.37  Aligned_cols=218  Identities=14%  Similarity=0.137  Sum_probs=179.7

Q ss_pred             CcCCCCCCCCCC--chHHHHHHHHhhCCCEEEEecCCh---HhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKP--GIGRCIVEKLSQHEAIIIALSKTQ---ANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~--gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||++  |||+++|++|+++|++|++++|+.   +.++++....+....++||++|++++++++++    +|+
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            457899999986  999999999999999999998873   34555555555667889999999999888754    488


Q ss_pred             ccEEEEccCCCCCCC-----CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         82 VDVLINNAAVARFDR-----FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        82 id~li~~ag~~~~~~-----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                      +|++|||||+....+     +.+.+.++ |++++++|+.+++.+++.+.|.+. +  +|+|+++||..+..+.++..+|+
T Consensus        85 iD~linnAg~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~-~--~g~Iv~iss~~~~~~~~~~~~Y~  160 (262)
T PRK07984         85 FDGFVHSIGFAPGDQLDGDYVNAVTREG-FKIAHDISSYSFVAMAKACRSMLN-P--GSALLTLSYLGAERAIPNYNVMG  160 (262)
T ss_pred             CCEEEECCccCCccccCCcchhhcCHHH-HHHHhhhhhHHHHHHHHHHHHHhc-C--CcEEEEEecCCCCCCCCCcchhH
Confidence            999999999864322     34556677 999999999999999999998664 2  47999999998888888889999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +||+|+++|+++++.|++++|||||+|+||+++|++........+..+......|++|+++|+|++++++||+|+.
T Consensus       161 asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~  236 (262)
T PRK07984        161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDL  236 (262)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999875432111112223344679999999999999999999974

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.9e-41  Score=272.61  Aligned_cols=219  Identities=16%  Similarity=0.197  Sum_probs=183.6

Q ss_pred             CcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCC---hHhHHHHHhhC--CCceEEEeecCCHHHHHHHHHh----c
Q psy14567         11 RTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKT---QANLDSLKQAF--PNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus        11 ~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      +.++++||||+  +|||+++|++|+++|++|++++|+   .+.++++.++.  .++..+++|++|++++++++++    +
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            45788999997  899999999999999999998765   34566666654  3577889999999999888754    4


Q ss_pred             CCccEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchh
Q psy14567         80 GPVDVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIY  155 (238)
Q Consensus        80 g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y  155 (238)
                      |++|++|||||+...    .++.+.+.++ |+..+++|+.+++.++++++|.|.+   +|+||++||..+..+.+...+|
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~Y  161 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDG-FLLAQNISAYSLTAVAREAKKLMTE---GGSIVTLTYLGGERVVQNYNVM  161 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHH-HHHHHhhhHHHHHHHHHHHHHhccc---CceEEEEcccCCccCCCCCchh
Confidence            899999999997642    4556777787 9999999999999999999999954   4899999999998888888999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      ++||+|+.+|+++++.|++++|||||+|+||+++|++.......++..+......|++|+.+|+|+|+.+.||+|+..
T Consensus       162 ~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~~  239 (257)
T PRK08594        162 GVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDLS  239 (257)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999999999999999754321111222234456789999999999999999999753

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-41  Score=272.57  Aligned_cols=219  Identities=24%  Similarity=0.327  Sum_probs=186.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      .+.++++||||++|||++++++|+++|++|++++|+.++++++.++.    .++..+++|+++++++++++++    +|+
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG   86 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            34578999999999999999999999999999999988877665443    4577889999999999888765    489


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-C-CCchhhHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-E-GHTIYSASK  159 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~-~~~~y~~sK  159 (238)
                      +|++|||||.....++.+.+.++ |++++++|+.+++.+++++.|.|.+++.+|+|+++||..+.... + ....|+++|
T Consensus        87 id~lv~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asK  165 (253)
T PRK05867         87 IDIAVCNAGIITVTPMLDMPLEE-FQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASK  165 (253)
T ss_pred             CCEEEECCCCCCCCChhhCCHHH-HHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHH
Confidence            99999999988777777777887 99999999999999999999999876545799999998876532 3 457899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+++++++++.+++++||+||+|+||+++|++....   ++..+.+....|++|+++|+|+|++++||+|+.
T Consensus       166 aal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~  235 (253)
T PRK05867        166 AAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY---TEYQPLWEPKIPLGRLGRPEELAGLYLYLASEA  235 (253)
T ss_pred             HHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc---hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999986542   122233445678999999999999999999873

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.7e-40  Score=269.11  Aligned_cols=219  Identities=24%  Similarity=0.296  Sum_probs=183.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      .+.++++||||++|||+++++.|+++|++|++++|+ +.++++.++    ..++..+++|+++++++++++++    +|+
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            345688999999999999999999999999999999 555444333    33578899999999999887765    488


Q ss_pred             ccEEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         82 VDVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        82 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      +|++|||||+... .++.+.+.++ |++++++|+.+++.++++++|.+.+++  |+||++||..+..+.++..+|++||+
T Consensus        83 id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~asKa  159 (272)
T PRK08589         83 VDVLFNNAGVDNAAGRIHEYPVDV-FDKIMAVDMRGTFLMTKMLLPLMMEQG--GSIINTSSFSGQAADLYRSGYNAAKG  159 (272)
T ss_pred             cCEEEECCCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEeCchhhcCCCCCCchHHHHHH
Confidence            9999999998643 4566677777 999999999999999999999997653  89999999999888888899999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCC------ccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPA------KAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~------~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++|+++++.+++++||+||+|+||+++|++.+......+      +........|++|+.+|+|+|+++.||+++.
T Consensus       160 al~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  237 (272)
T PRK08589        160 AVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDD  237 (272)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCch
Confidence            99999999999999999999999999999998754322111      1112223568999999999999999999874

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-40  Score=267.14  Aligned_cols=221  Identities=24%  Similarity=0.279  Sum_probs=187.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      +.++++||||++|||.+++++|+++|++|++++|++++++++.++    ..++.++.+|+++++++++++++    ++++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            346889999999999999999999999999999998887765543    34578899999999998887765    4889


Q ss_pred             cEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-ccCCCCchhhHHHH
Q psy14567         83 DVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-TALEGHTIYSASKA  160 (238)
Q Consensus        83 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~~y~~sK~  160 (238)
                      |++|||||+.. ..++.+.+.++ |++.+++|+.+++.++++++|.+.+++ .++||++||..+. .+.++...|++||+
T Consensus        85 d~li~~ag~~~~~~~~~~~~~~~-~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  162 (254)
T PRK07478         85 DIAFNNAGTLGEMGPVAEMSLEG-WRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAGFPGMAAYAASKA  162 (254)
T ss_pred             CEEEECCCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccCCCCcchhHHHHH
Confidence            99999999864 35666777787 999999999999999999999998776 6899999999886 46788899999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      ++++++++++.+++++||+||+|+||+++|++.+.....++.........|++|+.+|+|+|+.++||+++..
T Consensus       163 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  235 (254)
T PRK07478        163 GLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAA  235 (254)
T ss_pred             HHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            9999999999999999999999999999999876432222222233455688999999999999999998753

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-40  Score=268.05  Aligned_cols=223  Identities=25%  Similarity=0.319  Sum_probs=186.6

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH-hHHH----HHhhCCCceEEEeecCCHHHHHHHHHh---
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA-NLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK---   78 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~----~~~~~~~~~~~~~D~~~~~~v~~~~~~---   78 (238)
                      +...+.++++||||++|||+++|++|+++|++|++++|+.+ .+++    +.+...++..+++|++|++++++++++   
T Consensus         3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   82 (254)
T PRK06114          3 LFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEA   82 (254)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            34456678999999999999999999999999999998753 2333    333334577899999999999887765   


Q ss_pred             -cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCC--Cchh
Q psy14567         79 -VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEG--HTIY  155 (238)
Q Consensus        79 -~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~y  155 (238)
                       ++++|++|||||.....++.+.+.++ |++++++|+.+++.++++++|.+.+++ .++||++||..+..+.++  ...|
T Consensus        83 ~~g~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~Y  160 (254)
T PRK06114         83 ELGALTLAVNAAGIANANPAEEMEEEQ-WQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRGLLQAHY  160 (254)
T ss_pred             HcCCCCEEEECCCCCCCCChHhCCHHH-HHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCCCcchH
Confidence             48899999999988767777788888 999999999999999999999998766 689999999988765543  6899


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+|+++++++++.++.++||+||.|+||+++|++.... ...+..+.+....|++|+++|+|++++++||+|+.
T Consensus       161 ~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~  236 (254)
T PRK06114        161 NASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDA  236 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999986531 11122233456789999999999999999999874

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=8.2e-41  Score=274.02  Aligned_cols=219  Identities=18%  Similarity=0.189  Sum_probs=176.2

Q ss_pred             CCcCCCCCCCC--CCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-----------------CceEEEeec--CC
Q psy14567         10 DRTNTKGGDYP--KPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----------------NVQTVQVDL--QD   68 (238)
Q Consensus        10 ~~~~v~~itG~--s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------------~~~~~~~D~--~~   68 (238)
                      .+.++++||||  |+|||+++|+.|+++|++|++ +|+.++++++.....                 ....+++|+  ++
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            46789999999  899999999999999999998 777666555432221                 135788898  33


Q ss_pred             ------------------HHHHHHHHHh----cCCccEEEEccCCCC--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHH
Q psy14567         69 ------------------WARTRAAVSK----VGPVDVLINNAAVAR--FDRFLDIDEENLIDSIFDVNIKAVINISQVV  124 (238)
Q Consensus        69 ------------------~~~v~~~~~~----~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  124 (238)
                                        ++++++++++    +|++|++|||||...  ..++.+.+.++ |++++++|+.+++.+++++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~-~~~~~~vN~~~~~~l~~~~  164 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKG-YLAAISASSYSFVSLLQHF  164 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHH
Confidence                              3367666654    589999999998643  36778888888 9999999999999999999


Q ss_pred             HHHHHhccCCceEEEEccccccccCCCC-chhhHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCCceecCcccCCCCCCCc
Q psy14567        125 SKTMIDHKIQGSIVNVSSIAGKTALEGH-TIYSASKAALDSITRTMALELGP-YNIRVNSVQPTVVMTQMGRTGWSDPAK  202 (238)
Q Consensus       125 ~~~~~~~~~~g~iv~isS~~~~~~~~~~-~~y~~sK~al~~l~~~l~~~~~~-~~i~v~~i~PG~v~t~~~~~~~~~~~~  202 (238)
                      +|.|.+   .|+||++||..+..+.++. ..|++||+|+++|+++++.|+++ +|||||+|+||+++|+|.......++.
T Consensus       165 ~p~m~~---~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~  241 (303)
T PLN02730        165 GPIMNP---GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDM  241 (303)
T ss_pred             HHHHhc---CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHH
Confidence            999965   3899999999988877765 48999999999999999999986 799999999999999997642111222


Q ss_pred             cCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        203 AGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       203 ~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      .+......|++|+.+|+|+++++.||+|+..
T Consensus       242 ~~~~~~~~pl~r~~~peevA~~~~fLaS~~a  272 (303)
T PLN02730        242 IEYSYANAPLQKELTADEVGNAAAFLASPLA  272 (303)
T ss_pred             HHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            2222345688999999999999999999753

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1.9e-40  Score=267.32  Aligned_cols=223  Identities=22%  Similarity=0.308  Sum_probs=188.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH--hHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA--NLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVD   83 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id   83 (238)
                      .+.++++||||++|||.+++++|++.|++|++++++..  ..+++.+....+..+++|++|+++++++++++    +++|
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            44578899999999999999999999999998877542  23344433345778899999999998888654    8899


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||+....++.+.+.++ |++++++|+.+++.+++++.|.|.+++.+|+||++||..+..+.+....|+++|+|++
T Consensus        88 ~li~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  166 (253)
T PRK08993         88 ILVNNAGLIRREDAIEFSEKD-WDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVM  166 (253)
T ss_pred             EEEECCCCCCCCCcccCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHH
Confidence            999999987767777888887 9999999999999999999999987654589999999998888888899999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      +++++++.++.++||+||.|+||+++|++.......+.....+.+..|++|+.+|+|+|+.+.||+|+..
T Consensus       167 ~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~  236 (253)
T PRK08993        167 GVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSAS  236 (253)
T ss_pred             HHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            9999999999999999999999999999875432222222344567899999999999999999999853

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-40  Score=268.69  Aligned_cols=222  Identities=20%  Similarity=0.226  Sum_probs=185.7

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHHhh-----CCCceEEEeecCCHHHHHHHHHhc---
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLKQA-----FPNVQTVQVDLQDWARTRAAVSKV---   79 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~---   79 (238)
                      ..+.++++||||++|||+++|++|++.|++|++++| +++.++++.+.     ..++.++++|++|+++++++++++   
T Consensus         5 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (260)
T PRK08416          5 EMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDED   84 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            345678899999999999999999999999988865 55555443322     235788999999999998888654   


Q ss_pred             -CCccEEEEccCCCC------CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCC
Q psy14567         80 -GPVDVLINNAAVAR------FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGH  152 (238)
Q Consensus        80 -g~id~li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  152 (238)
                       +++|++|||||+..      ..++.+.+.++ +++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.++.
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~  162 (260)
T PRK08416         85 FDRVDFFISNAIISGRAVVGGYTKFMRLKPKG-LNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVYIENY  162 (260)
T ss_pred             cCCccEEEECccccccccccccCChhhCCHHH-HHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccCCCCc
Confidence             88999999998653      24555667777 999999999999999999999998765 6899999999988888889


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ..|++||+++++++++++.|++++|||||+|+||+++|++.......++..+.+....|++|+.+|+|+|++++||+++.
T Consensus       163 ~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~~~  242 (260)
T PRK08416        163 AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCSEK  242 (260)
T ss_pred             ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChh
Confidence            99999999999999999999999999999999999999986543322333344556679999999999999999999874

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.1e-40  Score=267.49  Aligned_cols=217  Identities=18%  Similarity=0.178  Sum_probs=178.7

Q ss_pred             CcCCCCCCCC--CCchHHHHHHHHhhCCCEEEEecCCh--HhHHHHHhhCC-CceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYP--KPGIGRCIVEKLSQHEAIIIALSKTQ--ANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~--s~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||  ++|||.++|++|+++|++|++++|+.  +..+++.++.+ .+.++++|++|++++++++++    +|+
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4568999999  89999999999999999999998764  44566655543 467899999999999888755    489


Q ss_pred             ccEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhH
Q psy14567         82 VDVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSA  157 (238)
Q Consensus        82 id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~  157 (238)
                      +|++|||||+...    .++.+.+.++ |++++++|+.+++.+++.++|.|.+   +|+||++++.. ..+.+.+..|++
T Consensus        86 iD~li~nAG~~~~~~~~~~~~~~~~~~-~~~~~~vN~~~~~~l~~~~~~~m~~---~g~Iv~is~~~-~~~~~~~~~Y~a  160 (256)
T PRK07889         86 LDGVVHSIGFAPQSALGGNFLDAPWED-VATALHVSAYSLKSLAKALLPLMNE---GGSIVGLDFDA-TVAWPAYDWMGV  160 (256)
T ss_pred             CcEEEEccccccccccCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHhccc---CceEEEEeecc-cccCCccchhHH
Confidence            9999999998643    3456667777 9999999999999999999999963   47999998653 455667788999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCC-CcCCCCCcccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLG-RFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~ia~~~~~l~s~~  232 (238)
                      ||+|+.+|+++++.|++++|||||+|+||+++|++.+.....++..+.+.+..|++ |+++|+|+|++++||+++.
T Consensus       161 sKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~  236 (256)
T PRK07889        161 AKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDW  236 (256)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999998654322222222334567888 6899999999999999974

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-40  Score=265.92  Aligned_cols=221  Identities=26%  Similarity=0.335  Sum_probs=191.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      .+.++++||||++|||++++++|+++|++|++++|+.++++++.++.    ..+..+++|++|++++++++++    +++
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            34568899999999999999999999999999999987766554432    3567889999999999887755    478


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||+|.....++.+.+.++ |++++++|+.+++.+++++.+.+.+++ .++||++||..+..+.++...|+++|++
T Consensus        87 id~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a  164 (254)
T PRK08085         87 IDVLINNAGIQRRHPFTEFPEQE-WNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSELGRDTITPYAASKGA  164 (254)
T ss_pred             CCEEEECCCcCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhccCCCCCcchHHHHHH
Confidence            99999999987767777888887 999999999999999999999997765 6899999999988888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++++.+++++||++|+|+||+++|++.......++.........|++|+++|+|+|+++.||+++.
T Consensus       165 ~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~  235 (254)
T PRK08085        165 VKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKA  235 (254)
T ss_pred             HHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999987654333333344556789999999999999999999864

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-40  Score=266.26  Aligned_cols=220  Identities=24%  Similarity=0.268  Sum_probs=187.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CC--CceEEEeecCCHHHHHHHHHh----cC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FP--NVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      +.++++||||++|||++++++|+++|++|++++|+.+++++..++    .+  .+..+++|++|++++++++++    ++
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            457899999999999999999999999999999998876654433    22  467889999999999887765    48


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||.....++.+.+.++ |++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.++...|+++|+
T Consensus        87 ~id~li~~Ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~y~asKa  164 (265)
T PRK07062         87 GVDMLVNNAGQGRVSTFADTTDDA-WRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPEPHMVATSAARA  164 (265)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCCCCchHhHHHHH
Confidence            899999999988777777888887 999999999999999999999998766 689999999999888888899999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC----CCCccC----C--cccCCCCCCcCCCCCcccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS----DPAKAG----P--MLAKTPLGRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~----~~~~~~----~--~~~~~~~~r~~~~~~ia~~~~~l~s  230 (238)
                      ++.+++++++.|+.++||+||+|+||+++|++......    ..+...    .  .....|++|+++|+|+|+++.||++
T Consensus       165 al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~s  244 (265)
T PRK07062        165 GLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLAS  244 (265)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999998643211    001011    1  1356799999999999999999998


Q ss_pred             cc
Q psy14567        231 SV  232 (238)
Q Consensus       231 ~~  232 (238)
                      +.
T Consensus       245 ~~  246 (265)
T PRK07062        245 PL  246 (265)
T ss_pred             ch
Confidence            74

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-40  Score=266.19  Aligned_cols=218  Identities=20%  Similarity=0.210  Sum_probs=183.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHh----cCCccEEE
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSK----VGPVDVLI   86 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~----~g~id~li   86 (238)
                      .++||||++|||++++++|+++|++|++++|+++.+++..++.   +++.++++|++|++++++++++    ++++|++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            4789999999999999999999999999999988776654433   3578899999999999888764    48999999


Q ss_pred             EccCCCC--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         87 NNAAVAR--FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        87 ~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      ||||...  ..++.+.+.++ |.+.+++|+.+++++++.++|.+.++..+|+||++||..+..+.++...|+++|+++.+
T Consensus        82 ~naG~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~  160 (259)
T PRK08340         82 WNAGNVRCEPCMLHEAGYSD-WLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQ  160 (259)
T ss_pred             ECCCCCCCCccccccccHHH-HHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHH
Confidence            9999753  23456677777 89999999999999999999998754336899999999998888889999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCC---------CCCC-ccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW---------SDPA-KAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~---------~~~~-~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++.+++++||+||+|+||+++|++.+...         ..++ ..+......|++|+++|+|+|+++.||+|+.
T Consensus       161 ~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~  238 (259)
T PRK08340        161 LAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSEN  238 (259)
T ss_pred             HHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999864211         1111 1233456779999999999999999999974

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.5e-40  Score=270.11  Aligned_cols=222  Identities=16%  Similarity=0.150  Sum_probs=177.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh----------HhHHHHHhh----CCCceEEEeecCCHHHHHHH
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ----------ANLDSLKQA----FPNVQTVQVDLQDWARTRAA   75 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~----------~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~   75 (238)
                      .+.++++||||++|||+++|++|++.|++|++++|+.          ++++++.++    ...+.++++|++++++++++
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            3567899999999999999999999999999999973          233333222    23467889999999999888


Q ss_pred             HHh----cCCccEEEEcc-CCCC----CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc
Q psy14567         76 VSK----VGPVDVLINNA-AVAR----FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK  146 (238)
Q Consensus        76 ~~~----~g~id~li~~a-g~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  146 (238)
                      +++    +|++|++|||| |...    ..++.+.+.++ |++++++|+.+++.++++++|.|.+++ +|+||++||..+.
T Consensus        86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~~~~  163 (305)
T PRK08303         86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDK-GLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDGTAE  163 (305)
T ss_pred             HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHH-HHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCcccc
Confidence            765    48999999999 7531    14566677777 999999999999999999999998765 6899999997664


Q ss_pred             c---cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC-CCCccCCcccCCC-CCCcCCCCCc
Q psy14567        147 T---ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-DPAKAGPMLAKTP-LGRFAGKLKP  221 (238)
Q Consensus       147 ~---~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~-~~r~~~~~~i  221 (238)
                      .   +.++...|++||+|+.+|+++++.|++++|||||+|+||+++|+|...... .++.........| ++|..+|+|+
T Consensus       164 ~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~peev  243 (305)
T PRK08303        164 YNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPHFAISETPRYV  243 (305)
T ss_pred             ccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccccccCCCHHHH
Confidence            3   234567899999999999999999999999999999999999998543211 1111111223456 5788899999


Q ss_pred             cccccccccccc
Q psy14567        222 KPWNRWLLPSVG  233 (238)
Q Consensus       222 a~~~~~l~s~~~  233 (238)
                      |+++.||+|+..
T Consensus       244 A~~v~fL~s~~~  255 (305)
T PRK08303        244 GRAVAALAADPD  255 (305)
T ss_pred             HHHHHHHHcCcc
Confidence            999999999864

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=4.4e-41  Score=269.19  Aligned_cols=209  Identities=32%  Similarity=0.471  Sum_probs=185.1

Q ss_pred             CCC--CchHHHHHHHHhhCCCEEEEecCChHh----HHHHHhhCCCceEEEeecCCHHHHHHHHHh----c-CCccEEEE
Q psy14567         19 YPK--PGIGRCIVEKLSQHEAIIIALSKTQAN----LDSLKQAFPNVQTVQVDLQDWARTRAAVSK----V-GPVDVLIN   87 (238)
Q Consensus        19 G~s--~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~-g~id~li~   87 (238)
                      |++  +|||+++|++|+++|++|++++|+.++    ++++.++.+ ..++++|+++++++++++++    + |++|++||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~   79 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AEVIQCDLSDEESVEALFDEAVERFGGRIDILVN   79 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-CceEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence            455  999999999999999999999999987    566666665 44799999999999888754    6 89999999


Q ss_pred             ccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         88 NAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        88 ~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      |+|....    .++.+.+.++ |+..+++|+.+++.+++++.|+|.++   |+||++||..+..+.+++..|+++|+|++
T Consensus        80 ~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---gsii~iss~~~~~~~~~~~~y~~sKaal~  155 (241)
T PF13561_consen   80 NAGISPPSNVEKPLLDLSEED-WDKTFDINVFSPFLLAQAALPLMKKG---GSIINISSIAAQRPMPGYSAYSASKAALE  155 (241)
T ss_dssp             EEESCTGGGTSSSGGGSHHHH-HHHHHHHHTHHHHHHHHHHHHHHHHE---EEEEEEEEGGGTSBSTTTHHHHHHHHHHH
T ss_pred             cccccccccCCCChHhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhC---CCcccccchhhcccCccchhhHHHHHHHH
Confidence            9998765    5667777777 99999999999999999999988763   79999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGP-YNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~-~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+|+++.|+++ +|||||+|+||+++|++.+.....++..+.....+|++|+++|+|||++++||+|+.
T Consensus       156 ~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~  225 (241)
T PF13561_consen  156 GLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDA  225 (241)
T ss_dssp             HHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999 999999999999999986554334566677788899999999999999999999985

...

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=9.4e-40  Score=264.01  Aligned_cols=213  Identities=21%  Similarity=0.347  Sum_probs=183.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVL   85 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~l   85 (238)
                      .+.++++||||++|||++++++|+++|++|++++|+.+..       ..+.+++||++++++++++++++    +++|++
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~l   76 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDIL   76 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3457899999999999999999999999999999987542       25778999999999998877654    789999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||+....++.+.+.++ |++++++|+.+++.++++++|+|.+++ .|+||++||..+..+.++..+|+++|++++++
T Consensus        77 i~~Ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~  154 (258)
T PRK06398         77 VNNAGIESYGAIHAVEEDE-WDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFAVTRNAAAYVTSKHAVLGL  154 (258)
T ss_pred             EECCCCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhccCCCCCchhhhhHHHHHHH
Confidence            9999988777788888888 999999999999999999999998766 68999999999988888999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCC-----CCCc----cCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-----DPAK----AGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-----~~~~----~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++.|+.++ |+||+|+||+++|++......     .++.    ...+....|++|+.+|+|+|++++||+|+.
T Consensus       155 ~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~  229 (258)
T PRK06398        155 TRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDL  229 (258)
T ss_pred             HHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence            99999999986 999999999999998654211     1111    112345578999999999999999999974

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-39  Score=261.00  Aligned_cols=219  Identities=26%  Similarity=0.276  Sum_probs=185.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      .+.++++||||++|||++++++|+++|++|++++|+.+.++++.++.+ .+.++++|+++++++++++++    ++++|+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            345789999999999999999999999999999999988777766543 578899999999999887765    489999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||||...... .+.+.++ |++.+++|+.+++.+++++.|.|. ++ .|+||++||..+..+.++...|+++|+++++
T Consensus        84 lv~~ag~~~~~~-~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~-~~-~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~  159 (261)
T PRK08265         84 LVNLACTYLDDG-LASSRAD-WLAALDVNLVSAAMLAQAAHPHLA-RG-GGAIVNFTSISAKFAQTGRWLYPASKAAIRQ  159 (261)
T ss_pred             EEECCCCCCCCc-CcCCHHH-HHHHHhHhhHHHHHHHHHHHHHHh-cC-CcEEEEECchhhccCCCCCchhHHHHHHHHH
Confidence            999999865433 3456676 999999999999999999999997 44 6899999999998888889999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-CCccCCc-ccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-PAKAGPM-LAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-~~~~~~~-~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++.++.++||++|+|+||+++|++....... .+..... ....|++|+++|+|+|+++.||+++.
T Consensus       160 ~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~  229 (261)
T PRK08265        160 LTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDA  229 (261)
T ss_pred             HHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999986543211 1111111 23468999999999999999999874

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-39  Score=263.33  Aligned_cols=221  Identities=26%  Similarity=0.353  Sum_probs=187.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh----hCCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      .+.++++||||++|||.+++++|+++|++|++++|+ ++.+++.+    ...++.++++|++++++++++++++    |+
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            456899999999999999999999999999999988 33333322    2235788999999999998877654    78


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||+|.....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+|+++||..+..+.++...|+++|++
T Consensus        92 id~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a  169 (258)
T PRK06935         92 IDILVNNAGTIRRAPLLEYKDED-WNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGGKFVPAYTASKHG  169 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHH-HHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCCCCchhhHHHHHH
Confidence            99999999987767777777777 999999999999999999999998876 6899999999988888888999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      +++++++++.++.++||+||.|+||+++|++.......+...+......|.+|+.+|+|+|+++.||+|+..
T Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  241 (258)
T PRK06935        170 VAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRAS  241 (258)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhh
Confidence            999999999999999999999999999999865432222222334456789999999999999999999753

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-39  Score=260.71  Aligned_cols=217  Identities=24%  Similarity=0.281  Sum_probs=179.6

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEec-CChHhHHHHHh----hCCCceEEEeecCCHHHHHHHHHhc-------
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALS-KTQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSKV-------   79 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~-------   79 (238)
                      .++++||||++|||.+++++|++.|++|++.. |+.+..++...    .......+++|+++.+++..+++++       
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNR   83 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhh
Confidence            46889999999999999999999999998875 55555544332    2345678899999998887766432       


Q ss_pred             -C--CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         80 -G--PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        80 -g--~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                       +  ++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+   .|+||++||..+..+.++..+|+
T Consensus        84 ~g~~~id~lv~~Ag~~~~~~~~~~~~~~-~~~~~~vN~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~  159 (252)
T PRK12747         84 TGSTKFDILINNAGIGPGAFIEETTEQF-FDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRISLPDFIAYS  159 (252)
T ss_pred             cCCCCCCEEEECCCcCCCCCcccCCHHH-HHHHHHHhhhHHHHHHHHHHHHhhc---CCeEEEECCcccccCCCCchhHH
Confidence             3  799999999987666677777787 9999999999999999999999964   47999999999998888899999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +||+++++++++++.++.++|||+|+|+||+++|++.......+..........|++|+.+|+|+|+++.||+++.
T Consensus       160 ~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  235 (252)
T PRK12747        160 MTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPD  235 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999987553322221111223347899999999999999999864

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=4e-39  Score=262.98  Aligned_cols=224  Identities=28%  Similarity=0.406  Sum_probs=189.1

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHh---
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK---   78 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~---   78 (238)
                      .+...+.++++||||++|||++++++|+++|++|++++|+.+..+++.++.    .++.++++|+++++++.+++++   
T Consensus         4 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (278)
T PRK08277          4 NLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILE   83 (278)
T ss_pred             ceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            334456688999999999999999999999999999999987766654432    3578899999999999887754   


Q ss_pred             -cCCccEEEEccCCCCC---------------CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         79 -VGPVDVLINNAAVARF---------------DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        79 -~g~id~li~~ag~~~~---------------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                       ++++|++|||||...+               .++.+.+.++ |++.+++|+.+++.++++++|.+.+++ .|+||++||
T Consensus        84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS  161 (278)
T PRK08277         84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEG-FEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISS  161 (278)
T ss_pred             HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcc
Confidence             4899999999996533               2345666777 999999999999999999999998776 689999999


Q ss_pred             ccccccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-----CCccCCcccCCCCCCcCC
Q psy14567        143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-----PAKAGPMLAKTPLGRFAG  217 (238)
Q Consensus       143 ~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~r~~~  217 (238)
                      ..+..+.++...|+++|+|+++++++++.+++++|||+|+|+||+++|++.+.....     .+..+......|++|+++
T Consensus       162 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  241 (278)
T PRK08277        162 MNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGK  241 (278)
T ss_pred             chhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCC
Confidence            999988889999999999999999999999999999999999999999986543211     122233456789999999


Q ss_pred             CCCccccccccccc
Q psy14567        218 KLKPKPWNRWLLPS  231 (238)
Q Consensus       218 ~~~ia~~~~~l~s~  231 (238)
                      |+|+|++++||+|+
T Consensus       242 ~~dva~~~~~l~s~  255 (278)
T PRK08277        242 PEELLGTLLWLADE  255 (278)
T ss_pred             HHHHHHHHHHHcCc
Confidence            99999999999998

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-39  Score=259.90  Aligned_cols=220  Identities=27%  Similarity=0.342  Sum_probs=184.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      .+.++++||||++|||++++++|+++|++|++++|+.+.++++.++.+ ++.++++|+++++++++++++    ++++|+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            345688999999999999999999999999999999988888776654 478899999999998887755    488999


Q ss_pred             EEEccCCCCC-CCCCCCChHH---HHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         85 LINNAAVARF-DRFLDIDEEN---LIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        85 li~~ag~~~~-~~~~~~~~~~---~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      +|||||+... .++.+.+.++   .|++++++|+.+++.++++++|.+.++  +|+||+++|..+..+.++...|+++|+
T Consensus        84 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~~sK~  161 (263)
T PRK06200         84 FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS--GGSMIFTLSNSSFYPGGGGPLYTASKH  161 (263)
T ss_pred             EEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCCchhHHHHH
Confidence            9999998642 3444444432   288899999999999999999998754  489999999999888888899999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC---------CCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW---------SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++++++++++.++++. ||||+|+||+++|+|.....         ..++..+......|++|+++|+|+|+++.||+|+
T Consensus       162 a~~~~~~~la~el~~~-Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~s~  240 (263)
T PRK06200        162 AVVGLVRQLAYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASR  240 (263)
T ss_pred             HHHHHHHHHHHHHhcC-cEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhheecc
Confidence            9999999999999885 99999999999999864211         0112233455678999999999999999999987


Q ss_pred             c
Q psy14567        232 V  232 (238)
Q Consensus       232 ~  232 (238)
                      .
T Consensus       241 ~  241 (263)
T PRK06200        241 R  241 (263)
T ss_pred             c
Confidence            5

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-39  Score=260.41  Aligned_cols=220  Identities=22%  Similarity=0.237  Sum_probs=190.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      +.++++||||++|||+++++.|++.|++|++++|+.++.+++.++.     .++.++.+|+++++++++++++++++|++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l   85 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL   85 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            3578999999999999999999999999999999988776654432     24778999999999999999999999999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||+|.....++.+.+.++ |+.++++|+.+++.++++++|.|.+++ .|+||++||..+..+.+++..|+++|+++.++
T Consensus        86 v~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~ask~al~~~  163 (259)
T PRK06125         86 VNNAGAIPGGGLDDVDDAA-WRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGENPDADYICGSAGNAALMAF  163 (259)
T ss_pred             EECCCCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccCCCCCchHhHHHHHHHHHH
Confidence            9999987767788888888 999999999999999999999998765 58999999999888888888999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCC--------CCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGW--------SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++.|+.++||+||+|+||+++|++.....        ..++..+.+....|++|+.+|+|+|+++.||+++.
T Consensus       164 ~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  238 (259)
T PRK06125        164 TRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLASPR  238 (259)
T ss_pred             HHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcCch
Confidence            99999999999999999999999999743211        12222334455678999999999999999999863

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=3.9e-39  Score=258.76  Aligned_cols=222  Identities=22%  Similarity=0.317  Sum_probs=186.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh--HHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDV   84 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~   84 (238)
                      +.++++||||++|||.+++++|+++|++|++++|++..  .+.+.+....+.++++|+++++++.++++++    +++|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            45788999999999999999999999999999997632  2233333345788999999999998877654    78999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||||.....++.+.+.++ |++++++|+.+++.++++++|.|.+++..|+||++||..+..+.+....|+++|+++++
T Consensus        84 li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~  162 (248)
T TIGR01832        84 LVNNAGIIRRADAEEFSEKD-WDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAG  162 (248)
T ss_pred             EEECCCCCCCCChhhCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHH
Confidence            99999988766777777777 99999999999999999999999775435899999999888777888999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      ++++++.++.++||++|+|+||+++|++.+.....++.........|.+|+.+|+|+|+++.||+++..
T Consensus       163 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (248)
T TIGR01832       163 LTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSAS  231 (248)
T ss_pred             HHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999999875432222222233456788999999999999999998743

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=7.9e-39  Score=263.15  Aligned_cols=219  Identities=21%  Similarity=0.218  Sum_probs=182.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh--HhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ--ANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      +.++++||||++|||++++++|+++|++|++.+|+.  +..+++.+.    ...+.++++|+++++++.+++++    +|
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            346899999999999999999999999999987653  334443322    23577889999999999887754    48


Q ss_pred             CccEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         81 PVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        81 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      ++|++|||||... ..++.+.+.++ |++++++|+.+++.+++++.|.|.+   .++||++||..+..+.++..+|+++|
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~iSS~~~~~~~~~~~~Y~asK  203 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQ-FQKTFAINVFALFWLTQEAIPLLPK---GASIITTSSIQAYQPSPHLLDYAATK  203 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHhhhc---CCEEEEECCchhccCCCCcchhHHHH
Confidence            8999999999753 35567777887 9999999999999999999999864   47999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      +|+++++++++.+++++||++|+|+||+++|++.......++....+....|++|+++|+|+|++++||+|+..
T Consensus       204 aal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~  277 (294)
T PRK07985        204 AAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQES  277 (294)
T ss_pred             HHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhc
Confidence            99999999999999999999999999999999864321122223345567899999999999999999999753

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=1.5e-38  Score=257.49  Aligned_cols=218  Identities=25%  Similarity=0.392  Sum_probs=180.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      +.++++||||++|||++++++|+++|++|++++|+.+.++++.+.. .++..+++|+++++++.+++++    ++++|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4578899999999999999999999999999999998888876654 3578899999999998877755    4899999


Q ss_pred             EEccCCCCC-CCCCCCCh----HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         86 INNAAVARF-DRFLDIDE----ENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        86 i~~ag~~~~-~~~~~~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      |||||.... .++.+.+.    ++ |++.+++|+.+++.++++++|.|.++  +|++|+++|..+..+.++...|+++|+
T Consensus        84 i~~Ag~~~~~~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~~sKa  160 (262)
T TIGR03325        84 IPNAGIWDYSTALVDIPDDRIDEA-FDEVFHINVKGYLLAVKAALPALVAS--RGSVIFTISNAGFYPNGGGPLYTAAKH  160 (262)
T ss_pred             EECCCCCccCCccccCCchhhhHH-HHHhheeecHhHHHHHHHHHHHHhhc--CCCEEEEeccceecCCCCCchhHHHHH
Confidence            999997532 23333332    34 89999999999999999999999764  378999999998888888889999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC---CCC-----CccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW---SDP-----AKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~---~~~-----~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++|+++++.+++++ ||||+|+||+++|+|.....   ...     +..+......|++|+++|+|+|+++.||+|+.
T Consensus       161 a~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~  239 (262)
T TIGR03325       161 AVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATRG  239 (262)
T ss_pred             HHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecCC
Confidence            9999999999999987 99999999999999864311   010     11122334579999999999999999999874

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-38  Score=256.32  Aligned_cols=221  Identities=28%  Similarity=0.352  Sum_probs=189.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      +.++++||||++|||.+++++|+++|++|++++|+.++++++.++    ..+..++++|+++.+++++++++    ++++
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            456889999999999999999999999999999998876665544    23577899999999998877755    4789


Q ss_pred             cEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         83 DVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        83 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      |++|||||... ..+..+.+.++ ++..+++|+.+++.++++++|++.+++ .++|+++||..+..+.++...|++||++
T Consensus        87 d~li~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  164 (252)
T PRK07035         87 DILVNNAAANPYFGHILDTDLGA-FQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPGDFQGIYSITKAA  164 (252)
T ss_pred             CEEEECCCcCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCCCCCCcchHHHHHH
Confidence            99999999753 34556667777 999999999999999999999998765 6899999999988888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      +++++++++.++.++||++|+|+||+++|++.......++..+......|.+|+.+|+|+|+.+.||+++..
T Consensus       165 l~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  236 (252)
T PRK07035        165 VISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDAS  236 (252)
T ss_pred             HHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999876544333444445567789999999999999999999853

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=7e-39  Score=258.40  Aligned_cols=220  Identities=24%  Similarity=0.367  Sum_probs=190.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      ..++++||||++|||++++++|+++|++|++++|+++..+++.+..    .++..+++|++|++++++++++    ++++
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4567999999999999999999999999999999988766544432    3477889999999999888765    4789


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||+|.....++.+.+.++ |++++++|+.+++.+++++.+.|.+++ .|+||++||..+..+.++...|+++|+++
T Consensus        89 d~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~~sK~a~  166 (255)
T PRK07523         89 DILVNNAGMQFRTPLEDFPADA-FERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSALARPGIAPYTATKGAV  166 (255)
T ss_pred             CEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhccCCCCCccHHHHHHHH
Confidence            9999999988777777788887 999999999999999999999998766 68999999999888888899999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++.+++++||+||+|.||+++|++.......+.....+....|++|+++|+|+|++++||+++.
T Consensus       167 ~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  236 (255)
T PRK07523        167 GNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDA  236 (255)
T ss_pred             HHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            9999999999999999999999999999987654333333334456779999999999999999999874

>KOG1201|consensus

Probab=100.00  E-value=1.5e-38  Score=251.24  Aligned_cols=188  Identities=25%  Similarity=0.329  Sum_probs=169.1

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHh----
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSK----   78 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~----   78 (238)
                      +++.-...+++||||++|||+++|.+|+++|+++++.+.|.+..++..++.   +.++.+.||+++.+++.+..++    
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            445556779999999999999999999999999999999887655544433   3689999999999999887755    


Q ss_pred             cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHH
Q psy14567         79 VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      +|++|++|||||+....++.+++.++ +++++++|+.++++++++|+|.|.+.+ .|.||.|+|.+|..+.++..+|++|
T Consensus       112 ~G~V~ILVNNAGI~~~~~ll~~~d~e-i~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g~~gl~~YcaS  189 (300)
T KOG1201|consen  112 VGDVDILVNNAGIVTGKKLLDCSDEE-IQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFGPAGLADYCAS  189 (300)
T ss_pred             cCCceEEEeccccccCCCccCCCHHH-HHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccCCccchhhhhh
Confidence            49999999999999989999999888 999999999999999999999999887 7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHh---CCCCeEEEEEeCCceecCcccC
Q psy14567        159 KAALDSITRTMALEL---GPYNIRVNSVQPTVVMTQMGRT  195 (238)
Q Consensus       159 K~al~~l~~~l~~~~---~~~~i~v~~i~PG~v~t~~~~~  195 (238)
                      |+|+.+|.++|..|+   .++||+...|+|++++|+|...
T Consensus       190 K~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  190 KFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG  229 (300)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence            999999999999988   4568999999999999999764

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-38  Score=257.61  Aligned_cols=221  Identities=22%  Similarity=0.310  Sum_probs=189.2

Q ss_pred             CcCCCCCCCCCC-chHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CC--CceEEEeecCCHHHHHHHHHhc----
Q psy14567         11 RTNTKGGDYPKP-GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FP--NVQTVQVDLQDWARTRAAVSKV----   79 (238)
Q Consensus        11 ~~~v~~itG~s~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~~----   79 (238)
                      +.++++||||+| |||+++++.|+++|++|++++|+.+++++..+.    .+  ++.++++|++++++++++++++    
T Consensus        16 ~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   95 (262)
T PRK07831         16 AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL   95 (262)
T ss_pred             CCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            457899999985 999999999999999999999998776654432    22  4778999999999998887654    


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      |++|++|||+|.....++.+.+.++ |++.+++|+.+++.+++.++|.|..+...|+|++++|..+..+.++...|+++|
T Consensus        96 g~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  174 (262)
T PRK07831         96 GRLDVLVNNAGLGGQTPVVDMTDDE-WSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAK  174 (262)
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHH
Confidence            8899999999987667777888887 999999999999999999999998764358999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      +++++++++++.+++++||+||.|+||+++|++..... .++..+.+....|++|+++|+|+|++++||+|+..
T Consensus       175 aal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~  247 (262)
T PRK07831        175 AGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT-SAELLDELAAREAFGRAAEPWEVANVIAFLASDYS  247 (262)
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            99999999999999999999999999999999865432 23333344556789999999999999999999753

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-38  Score=254.66  Aligned_cols=219  Identities=26%  Similarity=0.364  Sum_probs=185.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHhc----CCccE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSKV----GPVDV   84 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~----g~id~   84 (238)
                      ++++||||++|||++++++|+++|++|++++|+.++.+++.+..    ..+.++++|++++++++++++++    +++|+
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            57889999999999999999999999999999988766654432    35788999999999998877654    88999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||+|.....++.+.+.++ |++++++|+.+++.++++++|.|.+++..|+|+++||..+..+.++..+|+++|+++++
T Consensus        82 lI~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~  160 (252)
T PRK07677         82 LINNAAGNFICPAEDLSVNG-WNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLA  160 (252)
T ss_pred             EEECCCCCCCCCcccCCHHH-HHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHH
Confidence            99999976556677788888 99999999999999999999998765436899999999988887888999999999999


Q ss_pred             HHHHHHHHhCC-CCeEEEEEeCCceecCc-ccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGP-YNIRVNSVQPTVVMTQM-GRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~-~~i~v~~i~PG~v~t~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++.++.+ +||++|.|+||+++|+. ....+..++..+...+..|++|+.+|+|+++.+.||+++.
T Consensus       161 ~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  230 (252)
T PRK07677        161 MTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDE  230 (252)
T ss_pred             HHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCcc
Confidence            99999999974 69999999999999643 3222223333444556778999999999999999999874

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-38  Score=260.90  Aligned_cols=215  Identities=25%  Similarity=0.299  Sum_probs=178.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh---------HhHHHHHhh----CCCceEEEeecCCHHHHHHHH
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ---------ANLDSLKQA----FPNVQTVQVDLQDWARTRAAV   76 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~---------~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~   76 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.         +.++++.++    ..++..+.+|++|++++++++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            3457889999999999999999999999999998765         444444333    345778899999999998877


Q ss_pred             Hh----cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-----CceEEEEccccccc
Q psy14567         77 SK----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI-----QGSIVNVSSIAGKT  147 (238)
Q Consensus        77 ~~----~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~  147 (238)
                      ++    +|++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|+|.++..     .|+||++||..+..
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~  162 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEE-WDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQ  162 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCCcccCCHHH-HHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCc
Confidence            55    48999999999988767777888888 9999999999999999999999976421     37999999999999


Q ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCC--CcCCCCCccccc
Q psy14567        148 ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLG--RFAGKLKPKPWN  225 (238)
Q Consensus       148 ~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--r~~~~~~ia~~~  225 (238)
                      +.++...|+++|+|+++|+++++.|++++|||||+|+|| ++|+|.....      .......+.+  +..+|+|+|+++
T Consensus       163 ~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~------~~~~~~~~~~~~~~~~pedva~~~  235 (286)
T PRK07791        163 GSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF------AEMMAKPEEGEFDAMAPENVSPLV  235 (286)
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH------HHHHhcCcccccCCCCHHHHHHHH
Confidence            989999999999999999999999999999999999999 7898864311      1111222333  467999999999


Q ss_pred             ccccccc
Q psy14567        226 RWLLPSV  232 (238)
Q Consensus       226 ~~l~s~~  232 (238)
                      +||+|+.
T Consensus       236 ~~L~s~~  242 (286)
T PRK07791        236 VWLGSAE  242 (286)
T ss_pred             HHHhCch
Confidence            9999873

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=2.5e-38  Score=255.46  Aligned_cols=220  Identities=24%  Similarity=0.309  Sum_probs=191.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      +.++++||||++|||+++++.|+++|++|++++|+.+..+++.++.      .++.++.+|+++++++++++++    ++
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4568899999999999999999999999999999988776655432      3577889999999998887754    48


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++||++|.....+..+.+.++ |++.+++|+.+++.++++++|+|.+++ .++||++||..+..+.++...|+++|+
T Consensus        88 ~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~  165 (257)
T PRK09242         88 GLHILVNNAGGNIRKAAIDYTEDE-WRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHVRSGAPYGMTKA  165 (257)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCCCCCcchHHHHH
Confidence            899999999987666677778887 999999999999999999999998766 689999999999888888899999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++.++++++.++.++||++|+|+||+++|++.......++..+....+.|++|+++|+|+++++.||+++.
T Consensus       166 a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  237 (257)
T PRK09242        166 ALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPA  237 (257)
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999997655444444444556789999999999999999999864

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-38  Score=255.29  Aligned_cols=217  Identities=29%  Similarity=0.364  Sum_probs=181.9

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh-HhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ-ANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLI   86 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~li   86 (238)
                      .++++||||++|||+++|++|+++|++|+++.|+. +..+++.+.  ++.++++|++|+++++++++++    +++|++|
T Consensus         7 ~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          7 GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK--GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            46889999999999999999999999998876654 444455433  5788999999999998887654    8899999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-cCCCCchhhHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-ALEGHTIYSASKAALDSI  165 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~~~y~~sK~al~~l  165 (238)
                      ||||+....++.+.+.++ |++++++|+.+++.+++.++|.+.+++ .|+||++||..+.. +.++...|++||+|++++
T Consensus        85 ~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~  162 (255)
T PRK06463         85 NNAGIMYLMPFEEFDEEK-YNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTAAEGTTFYAITKAGIIIL  162 (255)
T ss_pred             ECCCcCCCCChhhCCHHH-HHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHH
Confidence            999987666677777787 999999999999999999999998766 68999999988764 446778899999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC---CccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP---AKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++.|++++||+||.|+||+++|++.......+   +..+.+..+.|++|+.+|+|+|+.++||+++.
T Consensus       163 ~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  232 (255)
T PRK06463        163 TRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDD  232 (255)
T ss_pred             HHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChh
Confidence            99999999999999999999999999875422221   12223445678999999999999999999874

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=3.6e-38  Score=254.35  Aligned_cols=219  Identities=24%  Similarity=0.269  Sum_probs=186.8

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      ++++||||+||||++++++|+++|++|++++|+.+..+++..+    ..++.++++|+++++++++++++    ++++|+
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV   82 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999998776655443    23577899999999998887765    478999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||||+....++.+.+.++ ++.++++|+.+++.+++.+++.+.+.+..++||++||..+..+.++...|+++|++++.
T Consensus        83 vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  161 (256)
T PRK08643         83 VVNNAGVAPTTPIETITEEQ-FDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRG  161 (256)
T ss_pred             EEECCCCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHHH
Confidence            99999987766777777787 99999999999999999999999776535799999999988888888999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC-------CCC-c-cCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-------DPA-K-AGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-------~~~-~-~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++.++.++.++||+||+|+||+++|++..+...       .++ + ...+....|.+|+.+|+|+|+++.||+++.
T Consensus       162 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~  238 (256)
T PRK08643        162 LTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPD  238 (256)
T ss_pred             HHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999998654211       111 1 123445678999999999999999999874

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-38  Score=254.59  Aligned_cols=216  Identities=25%  Similarity=0.314  Sum_probs=186.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~li   86 (238)
                      +.++++||||++|||++++++|+++|++|++++|+.+.    ......+.++++|++++++++++++++    +++|++|
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   80 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLV   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45788999999999999999999999999999998765    122345788999999999998887654    8899999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||.....+..+.+.++ |++++++|+.+++.+++++.|.|.+++..|+||++||..+..+.++...|+++|+++++|+
T Consensus        81 ~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~  159 (252)
T PRK07856         81 NNAGGSPYALAAEASPRF-HEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLT  159 (252)
T ss_pred             ECCCCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHHH
Confidence            999987666677777777 9999999999999999999999987543589999999999888889999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.++.++ |++|.|+||+++|++.......++....+....|++|+++|+|+|++++||+++.
T Consensus       160 ~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~  224 (252)
T PRK07856        160 RSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDL  224 (252)
T ss_pred             HHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999988 9999999999999986543333333334456679999999999999999999874

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-38  Score=255.20  Aligned_cols=222  Identities=22%  Similarity=0.333  Sum_probs=187.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh-HhHHH----HHhhCCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ-ANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~----~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      .+.++++||||++|||+++|++|+++|++|+++.|+. +..+.    +.+...++.++++|++|.+++++++++    ++
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   84 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG   84 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3567889999999999999999999999999888854 33333    322234577899999999998887754    48


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||.....++.+.+.++ |++.+++|+.+++.+++.++++|.+++..|+||++||..+..+.++..+|+++|+
T Consensus        85 ~id~lv~~ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa  163 (261)
T PRK08936         85 TLDVMINNAGIENAVPSHEMSLED-WNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKG  163 (261)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHH
Confidence            899999999987767777778887 9999999999999999999999987654689999999998888888999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++++++.++.+.||+||+|+||+++|++.......++.........|++|+.+|+|+++.+.||+++.
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  235 (261)
T PRK08936        164 GVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSE  235 (261)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999986543323333333445678999999999999999999874

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-38  Score=255.67  Aligned_cols=228  Identities=23%  Similarity=0.295  Sum_probs=193.6

Q ss_pred             eeeeeeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHH
Q psy14567          2 FIFAKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVS   77 (238)
Q Consensus         2 ~~~~~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~   77 (238)
                      |++++++- +.++++||||++|||.+++++|+++|++|++++|+.+++++..+..    .++.++++|++++++++++++
T Consensus         1 ~~~~~~~~-~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   79 (265)
T PRK07097          1 MSENLFSL-KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVS   79 (265)
T ss_pred             CCccccCC-CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            35666643 5578999999999999999999999999999999988766554432    358889999999999988886


Q ss_pred             h----cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCc
Q psy14567         78 K----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHT  153 (238)
Q Consensus        78 ~----~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  153 (238)
                      +    ++++|++|||||+....++.+.+.++ |++++++|+.+++.+.+.++|+|.+++ .++||++||..+..+.++..
T Consensus        80 ~~~~~~~~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~  157 (265)
T PRK07097         80 QIEKEVGVIDILVNNAGIIKRIPMLEMSAED-FRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGRETVS  157 (265)
T ss_pred             HHHHhCCCCCEEEECCCCCCCCCcccCCHHH-HHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCCCCCc
Confidence            5    47899999999998777777888887 999999999999999999999998766 78999999999888888899


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC------CCCccCCcccCCCCCCcCCCCCccccccc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS------DPAKAGPMLAKTPLGRFAGKLKPKPWNRW  227 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~r~~~~~~ia~~~~~  227 (238)
                      .|+++|+++++++++++.++.++||+||+|.||+++|++......      ...+........|.+|+.+|+|+|+.+.|
T Consensus       158 ~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  237 (265)
T PRK07097        158 AYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVF  237 (265)
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999999998654321      11112223446688999999999999999


Q ss_pred             ccccc
Q psy14567        228 LLPSV  232 (238)
Q Consensus       228 l~s~~  232 (238)
                      |+++.
T Consensus       238 l~~~~  242 (265)
T PRK07097        238 LASDA  242 (265)
T ss_pred             HhCcc
Confidence            99873

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=2.9e-38  Score=260.66  Aligned_cols=218  Identities=23%  Similarity=0.274  Sum_probs=182.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH--hHHHH----HhhCCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA--NLDSL----KQAFPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      +.++++||||++|||++++++|+++|++|+++.++.+  ..+++    .+....+.++++|+++++++++++++    ++
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            3468999999999999999999999999998876542  22222    22334577899999999999888765    48


Q ss_pred             CccEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         81 PVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        81 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      ++|++|||||... ..++.+.+.++ |++++++|+.+++.++++++|+|.+   +++||++||..+..+.++...|++||
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~Y~asK  209 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQ-FDATFKTNVYAMFWLCKAAIPHLPP---GASIINTGSIQSYQPSPTLLDYASTK  209 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHhcCc---CCEEEEECCccccCCCCCchhHHHHH
Confidence            8999999999763 34566777887 9999999999999999999999864   47999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++|+++++.++.++||+||+|.||+++|++.......++....+....|++|+++|+|+|++++||+++.
T Consensus       210 ~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~  282 (300)
T PRK06128        210 AAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQE  282 (300)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999986432212233334556789999999999999999999874

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-38  Score=260.51  Aligned_cols=220  Identities=24%  Similarity=0.267  Sum_probs=188.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC---CceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP---NVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      .+.++++||||+||||+++++.|+++|++|++++|+.++++++.++.+   .+..+++|++|+++++++++++    +++
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI   86 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            355688999999999999999999999999999999998888766553   3556679999999998887654    899


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.++  .|+||++||..+..+.++...|++||+++
T Consensus        87 d~vI~nAG~~~~~~~~~~~~~~-~~~~~~vn~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaal  163 (296)
T PRK05872         87 DVVVANAGIASGGSVAQVDPDA-FRRVIDVNLLGVFHTVRATLPALIER--RGYVLQVSSLAAFAAAPGMAAYCASKAGV  163 (296)
T ss_pred             CEEEECCCcCCCcCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCHhhcCCCCCchHHHHHHHHH
Confidence            9999999998777888888888 99999999999999999999999764  48999999999988889999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCccc--CCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLA--KTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~--~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++.+++++||++|+++||+++|+|........+....+..  ..|+++..+|+|+++.+.+++++.
T Consensus       164 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        164 EAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERR  235 (296)
T ss_pred             HHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999997653222111111222  247889999999999999999873

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-38  Score=253.16  Aligned_cols=220  Identities=28%  Similarity=0.310  Sum_probs=189.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      ..++++||||+||||.+++++|+++|++|++++|+.+..++..+.    ..++..+++|+++.++++++++++    |++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            357889999999999999999999999999999998775544332    345888999999999998877654    899


Q ss_pred             cEEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         83 DVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        83 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      |++|||+|.... .++.+.+.++ +++++++|+.+++.++++++|.+.+++ .++++++||..+..+.++...|+++|++
T Consensus        86 d~li~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sKaa  163 (253)
T PRK06172         86 DYAFNNAGIEIEQGRLAEGSEAE-FDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAAPKMSIYAASKHA  163 (253)
T ss_pred             CEEEECCCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCCCCCchhHHHHHH
Confidence            999999998643 3466777787 999999999999999999999998766 6899999999998888999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC-CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++++.++.++||++|+|+||+++|++.+.... .++....+....|.+|+.+|+|+++.+.||+++.
T Consensus       164 ~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~  235 (253)
T PRK06172        164 VIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDG  235 (253)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999765432 2333444566789999999999999999999975

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.5e-38  Score=252.33  Aligned_cols=217  Identities=23%  Similarity=0.295  Sum_probs=182.3

Q ss_pred             CCCcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCC-----------hHhHHH----HHhhCCCceEEEeecCCHHH
Q psy14567          9 PDRTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKT-----------QANLDS----LKQAFPNVQTVQVDLQDWAR   71 (238)
Q Consensus         9 ~~~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~-----------~~~~~~----~~~~~~~~~~~~~D~~~~~~   71 (238)
                      ....++++||||+  +|||.++|++|+++|++|++++|+           .+..++    +.+...++..+++|++++++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            3455788999999  499999999999999999987542           122222    23333457889999999999


Q ss_pred             HHHHHHh----cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc
Q psy14567         72 TRAAVSK----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT  147 (238)
Q Consensus        72 v~~~~~~----~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  147 (238)
                      +++++++    +|++|++|||||.....++.+.+.++ |++++++|+.+++.+.++++|.+.+++ .|+||++||..+..
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~  160 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEE-LDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQG  160 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccCC
Confidence            9888854    47899999999987767788888888 999999999999999999999998766 68999999999988


Q ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccc
Q psy14567        148 ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRW  227 (238)
Q Consensus       148 ~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~  227 (238)
                      +.++...|+++|+++++|+++++.+++++||++|+|+||+++|++...     +....+....|++++.+|+|+|+.+.|
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~-----~~~~~~~~~~~~~~~~~~~d~a~~~~~  235 (256)
T PRK12859        161 PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE-----EIKQGLLPMFPFGRIGEPKDAARLIKF  235 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH-----HHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            888999999999999999999999999999999999999999986432     222233456688999999999999999


Q ss_pred             ccccc
Q psy14567        228 LLPSV  232 (238)
Q Consensus       228 l~s~~  232 (238)
                      |+++.
T Consensus       236 l~s~~  240 (256)
T PRK12859        236 LASEE  240 (256)
T ss_pred             HhCcc
Confidence            99884

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-38  Score=252.71  Aligned_cols=221  Identities=26%  Similarity=0.310  Sum_probs=190.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhc----CCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV----GPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~----g~id~l   85 (238)
                      ..++++||||+||||.++++.|+++|++|++++|+.+..+++.+.. ..+.++++|++|+++++++++++    +++|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3567899999999999999999999999999999998887766554 35788999999999998887654    789999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||.....++.+.+.++ ++..+++|+.+++.+++++.+.+.+++.+++||++||..+..+.++...|++||++++.+
T Consensus        85 i~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  163 (257)
T PRK07067         85 FNNAALFDMAPILDISRDS-YDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISY  163 (257)
T ss_pred             EECCCcCCCCCcccCCHHH-HHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHHH
Confidence            9999988767777778887 999999999999999999999997764357999999998888888999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCC---------CCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGW---------SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++.++.++||++|.|.||+++|++.+...         ...+.........|++|+.+|+|+|+++.||+++.
T Consensus       164 ~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  239 (257)
T PRK07067        164 TQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASAD  239 (257)
T ss_pred             HHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999854321         01112223445679999999999999999999985

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=5e-38  Score=277.38  Aligned_cols=218  Identities=27%  Similarity=0.392  Sum_probs=188.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      ..++++||||++|||+++|++|+++|++|++++|+++.++++.++. .....+++|++|++++++++++    +|++|++
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4578899999999999999999999999999999998888877654 3567789999999999887765    4899999


Q ss_pred             EEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         86 INNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        86 i~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      |||||+.. ..++.+.+.++ |++++++|+.+++.++++++|.|.  + .|+||++||..+..+.++...|+++|+++++
T Consensus       348 i~nAg~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~--~-~g~iv~isS~~~~~~~~~~~~Y~asKaal~~  423 (520)
T PRK06484        348 VNNAGIAEVFKPSLEQSAED-FTRVYDVNLSGAFACARAAARLMS--Q-GGVIVNLGSIASLLALPPRNAYCASKAAVTM  423 (520)
T ss_pred             EECCCCcCCCCChhhCCHHH-HHHHHHhCcHHHHHHHHHHHHHhc--c-CCEEEEECchhhcCCCCCCchhHHHHHHHHH
Confidence            99999863 35667777887 999999999999999999999993  2 5899999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-CCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++.++.++||+||+|+||+++|+|....... .+..+.+.+..|++|+.+|+|+|+.+.||+++.
T Consensus       424 l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~  492 (520)
T PRK06484        424 LSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPA  492 (520)
T ss_pred             HHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999987543211 112233445678999999999999999999874

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-37  Score=252.51  Aligned_cols=215  Identities=30%  Similarity=0.380  Sum_probs=179.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~li   86 (238)
                      ..++++||||+||||++++++|+++|++|++++|+.+..+     ..++..+++|++++++++++++++    +++|++|
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li   82 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLV   82 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4567899999999999999999999999999999876542     135778999999999998877654    8999999


Q ss_pred             EccCCCCCCC---------CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhH
Q psy14567         87 NNAAVARFDR---------FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSA  157 (238)
Q Consensus        87 ~~ag~~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~  157 (238)
                      ||||......         ..+.+.++ |++++++|+.+++.+++++.++|.+++ .|+||++||..+..+.++...|++
T Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  160 (266)
T PRK06171         83 NNAGINIPRLLVDEKDPAGKYELNEAA-FDKMFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEAGLEGSEGQSCYAA  160 (266)
T ss_pred             ECCcccCCccccccccccccccCCHHH-HHHHHhhhchhHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCCCCchhHH
Confidence            9999764322         23456777 999999999999999999999998766 689999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCcee-cCcccCCCC----------CCCccCCccc--CCCCCCcCCCCCcccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVM-TQMGRTGWS----------DPAKAGPMLA--KTPLGRFAGKLKPKPW  224 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~-t~~~~~~~~----------~~~~~~~~~~--~~~~~r~~~~~~ia~~  224 (238)
                      +|+++++++++++.+++++||++|.|+||+++ |++....+.          ..+..+.+..  ..|++|+++|+|+|++
T Consensus       161 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~  240 (266)
T PRK06171        161 TKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADL  240 (266)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhh
Confidence            99999999999999999999999999999997 665432110          1112223333  6799999999999999


Q ss_pred             cccccccc
Q psy14567        225 NRWLLPSV  232 (238)
Q Consensus       225 ~~~l~s~~  232 (238)
                      +.||+|+.
T Consensus       241 ~~fl~s~~  248 (266)
T PRK06171        241 VCYLLSDR  248 (266)
T ss_pred             eeeeeccc
Confidence            99999974

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-37  Score=255.17  Aligned_cols=218  Identities=17%  Similarity=0.194  Sum_probs=167.1

Q ss_pred             CcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCCh---------Hh--HH-----------------HHHhhCCCce
Q psy14567         11 RTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKTQ---------AN--LD-----------------SLKQAFPNVQ   60 (238)
Q Consensus        11 ~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~~---------~~--~~-----------------~~~~~~~~~~   60 (238)
                      ..++++|||++  +|||+++|+.|+++|++|++.++.+         +.  ..                 .+.....+.+
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~   86 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPE   86 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCE
Confidence            56789999995  9999999999999999999976541         00  00                 0000111222


Q ss_pred             EEEeecCC--------HHHHHHHH----HhcCCccEEEEccCCCC--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14567         61 TVQVDLQD--------WARTRAAV----SKVGPVDVLINNAAVAR--FDRFLDIDEENLIDSIFDVNIKAVINISQVVSK  126 (238)
Q Consensus        61 ~~~~D~~~--------~~~v~~~~----~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  126 (238)
                      -+.+|+++        .+++++++    +++|++|++|||||...  ..++.+.+.++ |++++++|+.+++.++++++|
T Consensus        87 ~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~-~~~~~~vNl~g~~~l~~a~~p  165 (299)
T PRK06300         87 DVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKG-YLAALSTSSYSFVSLLSHFGP  165 (299)
T ss_pred             EeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHH
Confidence            33333333        12455544    45699999999998753  46778888888 999999999999999999999


Q ss_pred             HHHhccCCceEEEEccccccccCCCCc-hhhHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCCceecCcccCCCCCCCccC
Q psy14567        127 TMIDHKIQGSIVNVSSIAGKTALEGHT-IYSASKAALDSITRTMALELGP-YNIRVNSVQPTVVMTQMGRTGWSDPAKAG  204 (238)
Q Consensus       127 ~~~~~~~~g~iv~isS~~~~~~~~~~~-~y~~sK~al~~l~~~l~~~~~~-~~i~v~~i~PG~v~t~~~~~~~~~~~~~~  204 (238)
                      +|.+   +|+|++++|..+..+.++.. .|++||+|+.+|+++++.|+++ +|||||+|+||+++|++.......++..+
T Consensus       166 ~m~~---~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~  242 (299)
T PRK06300        166 IMNP---GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVD  242 (299)
T ss_pred             Hhhc---CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHH
Confidence            9964   47899999999888877765 8999999999999999999987 59999999999999998654211122222


Q ss_pred             CcccCCCCCCcCCCCCcccccccccccc
Q psy14567        205 PMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       205 ~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ......|++|..+|+|+++.+.||+|+.
T Consensus       243 ~~~~~~p~~r~~~peevA~~v~~L~s~~  270 (299)
T PRK06300        243 YYQDWAPLPEPMEAEQVGAAAAFLVSPL  270 (299)
T ss_pred             HHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            2334578999999999999999999974

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=2.8e-37  Score=246.32  Aligned_cols=214  Identities=26%  Similarity=0.357  Sum_probs=181.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      ..++++||||+||||++++++|+++|++|+++.| +.+..+++.++. +..++.+|++|++++.+++++++++|++||||
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a   83 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-GATAVQTDSADRDAVIDVVRKSGALDILVVNA   83 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-CCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence            4568899999999999999999999999988765 556666665544 36678999999999999998888999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-ccCCCCchhhHHHHHHHHHHHH
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-TALEGHTIYSASKAALDSITRT  168 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~~y~~sK~al~~l~~~  168 (238)
                      |.....+..+.+.++ |+..+++|+.+++.+++.+.+.+.+   .+++|++||..+. .+.++...|+++|++++.+++.
T Consensus        84 g~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~  159 (237)
T PRK12742         84 GIAVFGDALELDADD-IDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARG  159 (237)
T ss_pred             CCCCCCCcccCCHHH-HHHHHhHHHHHHHHHHHHHHHHHhc---CCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHH
Confidence            987666666777777 9999999999999999999999853   4799999998874 4677889999999999999999


Q ss_pred             HHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        169 MALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       169 l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++.+++++||+||.|+||+++|++.....   +..+......|++|+.+|+|+++.+.||+|+.
T Consensus       160 la~~~~~~gi~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~  220 (237)
T PRK12742        160 LARDFGPRGITINVVQPGPIDTDANPANG---PMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPE  220 (237)
T ss_pred             HHHHHhhhCeEEEEEecCcccCCcccccc---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999864321   12222334568899999999999999999874

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=2.4e-37  Score=249.65  Aligned_cols=218  Identities=28%  Similarity=0.368  Sum_probs=183.9

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHHh----hCCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      .++++||||++|||++++++|+++|++|+++.| +.+..+.+.+    ...++.++++|+++++++++++++    ++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            357899999999999999999999999988754 5554444333    234688999999999998887765    4889


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||+|.....++.+.+.++ |++++++|+.+++.+++++.++|.+++.+|+||++||..+..+.++...|+++|+++
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  160 (256)
T PRK12743         82 DVLVNNAGAMTKAPFLDMDFDE-WRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHAL  160 (256)
T ss_pred             CEEEECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHH
Confidence            9999999988766667777787 999999999999999999999997765458999999999988888999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++.++.++||++|.|+||+++|++....  .++.........|++|+.+|+|+++++.||+++.
T Consensus       161 ~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  228 (256)
T PRK12743        161 GGLTKAMALELVEHGILVNAVAPGAIATPMNGMD--DSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEG  228 (256)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999986532  2222223345678899999999999999999874

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=2.9e-37  Score=249.00  Aligned_cols=218  Identities=23%  Similarity=0.311  Sum_probs=186.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      ..++++||||++|||.+++++|+++|++|++++|+.+..+++.++    ..++.++.+|+++++++++++++    ++++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999998776655433    23577889999999999887655    4889


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||.....++ +.+.++ |+..+++|+.+++.+++++.|+|.+.+ .+++|++||..+..+.++...|+++|+++
T Consensus        90 d~li~~ag~~~~~~~-~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  166 (255)
T PRK06113         90 DILVNNAGGGGPKPF-DMPMAD-FRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSKAAA  166 (255)
T ss_pred             CEEEECCCCCCCCCC-CCCHHH-HHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCCCcchhHHHHHHH
Confidence            999999998755444 566676 999999999999999999999997655 67999999999988888899999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++.++.++||+||.|+||+++|++..... .++.........|++++++|+|++++++||+++.
T Consensus       167 ~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  235 (255)
T PRK06113        167 SHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPA  235 (255)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEeccccccccccccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999876432 2233333456678899999999999999999875

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-37  Score=255.25  Aligned_cols=216  Identities=21%  Similarity=0.237  Sum_probs=184.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      ...++++|||||+|||++++++|+++|++|++++|+++.++++.+++    .++.++.+|++|+++++++++++    |+
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            45578999999999999999999999999999999998887665543    35778899999999998887654    88


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||+....++.+.+.++ +++++++|+.+++.+++.++|+|.+++ .|+||+++|..+..+.++...|++||++
T Consensus        85 iD~lVnnAG~~~~~~~~~~~~e~-~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~p~~~~Y~asKaa  162 (330)
T PRK06139         85 IDVWVNNVGVGAVGRFEETPIEA-HEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQPYAAAYSASKFG  162 (330)
T ss_pred             CCEEEECCCcCCCCCcccCCHHH-HHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCCCCchhHHHHHHH
Confidence            99999999988777888888888 999999999999999999999998876 6899999999998888899999999999


Q ss_pred             HHHHHHHHHHHhCCC-CeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPY-NIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~-~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.+|+++++.|+.++ ||+|+.|+||+++|++........   .  ....+...+.+|+++|+.+++++.+.
T Consensus       163 l~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~---~--~~~~~~~~~~~pe~vA~~il~~~~~~  229 (330)
T PRK06139        163 LRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYT---G--RRLTPPPPVYDPRRVAKAVVRLADRP  229 (330)
T ss_pred             HHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccc---c--ccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999875 999999999999999864321110   0  11123344679999999999998664

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=2.8e-37  Score=246.33  Aligned_cols=212  Identities=21%  Similarity=0.227  Sum_probs=176.8

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEEEEc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLINN   88 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~li~~   88 (238)
                      ++++||||++|||++++++|+++|++|++++|+++...+..+.. ++.++.+|++++++++++++++    +++|++|||
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQA-GAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc-CCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            57899999999999999999999999999999876533322222 3678999999999998887654    789999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEEccccccccCCCCchhhHHHHHHHHHHH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK-IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITR  167 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~  167 (238)
                      ||........+.+.++ |++++++|+.+++.+++.++|.|.+++ ..++||++||..+..+.++...|+++|+++++|++
T Consensus        82 ag~~~~~~~~~~~~~~-~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~  160 (236)
T PRK06483         82 ASDWLAEKPGAPLADV-LARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTL  160 (236)
T ss_pred             CccccCCCcCccCHHH-HHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHH
Confidence            9986555555666777 999999999999999999999997653 14799999999988888889999999999999999


Q ss_pred             HHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        168 TMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       168 ~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +++.++++ +||||+|+||++.|+...    .++..+....+.|++|.++|+|+++++.||++.
T Consensus       161 ~~a~e~~~-~irvn~v~Pg~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  219 (236)
T PRK06483        161 SFAAKLAP-EVKVNSIAPALILFNEGD----DAAYRQKALAKSLLKIEPGEEEIIDLVDYLLTS  219 (236)
T ss_pred             HHHHHHCC-CcEEEEEccCceecCCCC----CHHHHHHHhccCccccCCCHHHHHHHHHHHhcC
Confidence            99999988 599999999999876421    222223344567899999999999999999974

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=6.5e-38  Score=252.98  Aligned_cols=217  Identities=24%  Similarity=0.318  Sum_probs=178.8

Q ss_pred             CCCCCCCCCchHHHHHHHHhh----CCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHhc----
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQ----HEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSKV----   79 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~----~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~----   79 (238)
                      +++||||++|||+++|++|++    .|++|++++|+.+.++++.++.      ..+.++++|++++++++++++++    
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            578999999999999999997    7999999999998877665432      24778899999999998887654    


Q ss_pred             CC----ccEEEEccCCCCCC--CCCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEEccccccccCCC
Q psy14567         80 GP----VDVLINNAAVARFD--RFLDI-DEENLIDSIFDVNIKAVINISQVVSKTMIDHK-IQGSIVNVSSIAGKTALEG  151 (238)
Q Consensus        80 g~----id~li~~ag~~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~  151 (238)
                      |+    .|++|||||.....  ...+. +.++ |++++++|+.+++.+++.++|.|.+++ ..++||++||..+..+.++
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~-~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~  160 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQ-VQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKG  160 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHH-HHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCC
Confidence            32    36999999976432  22223 3455 999999999999999999999998653 2479999999999888888


Q ss_pred             CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC---CCCCccCCcccCCCCCCcCCCCCcccccccc
Q psy14567        152 HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW---SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWL  228 (238)
Q Consensus       152 ~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l  228 (238)
                      ..+|++||+|+++|+++++.|++++||+||+|+||+++|+|.+...   ..++..+.+....|++|+.+|+|+|+.+.||
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l  240 (256)
T TIGR01500       161 WALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSL  240 (256)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999875321   1223333445667999999999999999999


Q ss_pred             ccc
Q psy14567        229 LPS  231 (238)
Q Consensus       229 ~s~  231 (238)
                      +++
T Consensus       241 ~~~  243 (256)
T TIGR01500       241 LEK  243 (256)
T ss_pred             Hhc
Confidence            964

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-37  Score=252.52  Aligned_cols=207  Identities=20%  Similarity=0.277  Sum_probs=170.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHh---cCCccEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK---VGPVDVL   85 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~---~g~id~l   85 (238)
                      ++++|||+ ||||+++|++|+ +|++|++++|+.++++++.++.    .++.++++|++|++++++++++   ++++|++
T Consensus         3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l   80 (275)
T PRK06940          3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL   80 (275)
T ss_pred             CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence            57889998 699999999997 8999999999987766554332    3577899999999999888765   4789999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC----------------
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL----------------  149 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------  149 (238)
                      |||||+...       .++ |++++++|+.+++.+++.+.|.|.+   +|++++++|..+..+.                
T Consensus        81 i~nAG~~~~-------~~~-~~~~~~vN~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  149 (275)
T PRK06940         81 VHTAGVSPS-------QAS-PEAILKVDLYGTALVLEEFGKVIAP---GGAGVVIASQSGHRLPALTAEQERALATTPTE  149 (275)
T ss_pred             EECCCcCCc-------hhh-HHHHHHHhhHHHHHHHHHHHHHHhh---CCCEEEEEecccccCcccchhhhccccccccc
Confidence            999997521       244 8999999999999999999999965   3678999998876542                


Q ss_pred             --------------CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC--CCccCCcccCCCCC
Q psy14567        150 --------------EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD--PAKAGPMLAKTPLG  213 (238)
Q Consensus       150 --------------~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~  213 (238)
                                    ++...|++||+|+.+++++++.+++++|||||+|+||+++|++....+..  ++..+.+....|++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~  229 (275)
T PRK06940        150 ELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAG  229 (275)
T ss_pred             cccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCcc
Confidence                          24678999999999999999999999999999999999999986542221  12223344567999


Q ss_pred             CcCCCCCcccccccccccc
Q psy14567        214 RFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       214 r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++|+|+|+++.||+|+.
T Consensus       230 r~~~peeia~~~~fL~s~~  248 (275)
T PRK06940        230 RPGTPDEIAALAEFLMGPR  248 (275)
T ss_pred             cCCCHHHHHHHHHHHcCcc
Confidence            9999999999999999874

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-37  Score=248.03  Aligned_cols=218  Identities=24%  Similarity=0.288  Sum_probs=176.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhH---HHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANL---DSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      +.++++||||++|||++++++|+++|++|++++|+....   +++.....++.++++|+++++++.+++++    ++++|
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence            457889999999999999999999999999999985321   22222234577899999999998877765    48899


Q ss_pred             EEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         84 VLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        84 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      ++|||||... ..++.+.+.++ |+..+++|+.+++.+++.++|.|.+++ .|+||++||..+.  ..+..+|+++|+++
T Consensus        87 ~lv~nAg~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~--~~~~~~Y~~sK~a~  162 (260)
T PRK12823         87 VLINNVGGTIWAKPFEEYEEEQ-IEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATR--GINRVPYSAAKGGV  162 (260)
T ss_pred             EEEECCccccCCCChhhCChHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCcccc--CCCCCccHHHHHHH
Confidence            9999999652 35667777787 999999999999999999999998766 6899999998764  23457899999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCC-----CCCC------CccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG-----WSDP------AKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~-----~~~~------~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++|+++++.+++++||++|+|+||+++|++....     ....      +.........|++|+++|+|+|+++.||+|+
T Consensus       163 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  242 (260)
T PRK12823        163 NALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILFLASD  242 (260)
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999863210     0010      1122334567999999999999999999987


Q ss_pred             c
Q psy14567        232 V  232 (238)
Q Consensus       232 ~  232 (238)
                      .
T Consensus       243 ~  243 (260)
T PRK12823        243 E  243 (260)
T ss_pred             c
Confidence            4

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.6e-36  Score=247.95  Aligned_cols=220  Identities=25%  Similarity=0.281  Sum_probs=181.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      +.++++||||++|||++++++|+++|++|++++|+.+..+++.+..   .++.++++|++|++++++++++    +|++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            4568999999999999999999999999999999887766665543   2578899999999999887754    48899


Q ss_pred             EEEEccCCCCC--CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         84 VLINNAAVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        84 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      ++|||||....  .++.+.+.++ |+.++++|+.+++.+++++.|.|.+++ .|+|++++|..+..+.++..+|+++|++
T Consensus        97 ~li~~Ag~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~~~~Y~~sK~a  174 (280)
T PLN02253         97 IMVNNAGLTGPPCPDIRNVELSE-FEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASAIGGLGPHAYTGSKHA  174 (280)
T ss_pred             EEEECCCcCCCCCCCcccCCHHH-HHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhcccCCCCcccHHHHHH
Confidence            99999997643  3466777787 999999999999999999999998765 6899999999988887778899999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccC--------CcccCCCC-CCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAG--------PMLAKTPL-GRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~--------~~~~~~~~-~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++++.+++++||+||+|+||.++|++........+...        ......++ ++..+|+|+|+++.||+|+.
T Consensus       175 ~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~  254 (280)
T PLN02253        175 VLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDE  254 (280)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCcc
Confidence            9999999999999999999999999999998543221111100        11122333 56789999999999999874

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-37  Score=247.03  Aligned_cols=219  Identities=33%  Similarity=0.486  Sum_probs=186.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhc----CCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV----GPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~----g~id~l   85 (238)
                      +.++++||||++|||.+++++|+++|++|++++|+.+..+...+.. .....+++|++++++++++++++    +++|++
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v   93 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDIL   93 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4568899999999999999999999999999999876433222211 24668999999999998887654    789999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||+|.....+..+.+.++ +++.+++|+.+++.+++.+.|.|.+++ .++||++||..+..+.+....|+++|++++++
T Consensus        94 i~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  171 (255)
T PRK06841         94 VNSAGVALLAPAEDVSEED-WDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVALERHVAYCASKAGVVGM  171 (255)
T ss_pred             EECCCCCCCCChhhCCHHH-HHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccCCCCCchHHHHHHHHHHH
Confidence            9999988766677777777 999999999999999999999998766 68999999999888889999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++.+++++||++|.|+||+++|++....+.. +.........|.+|+.+|+|++++++||+++.
T Consensus       172 ~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  237 (255)
T PRK06841        172 TKVLALEWGPYGITVNAISPTVVLTELGKKAWAG-EKGERAKKLIPAGRFAYPEEIAAAALFLASDA  237 (255)
T ss_pred             HHHHHHHHHhhCeEEEEEEeCcCcCcccccccch-hHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999987654322 12223445678999999999999999999874

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.9e-37  Score=246.90  Aligned_cols=221  Identities=24%  Similarity=0.362  Sum_probs=191.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      ...++++||||++|||++++++|+++|++|++++|+.+.++++.++    ..++.++++|+++++++.++++++    ++
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR   88 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            3567889999999999999999999999999999998776655433    335888999999999998877654    88


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||+|.....++.+.+.++ |++.+++|+.+++.+.+++++.+.+++ .+++|++||..+..+.++..+|+++|++
T Consensus        89 id~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a  166 (256)
T PRK06124         89 LDILVNNVGARDRRPLAELDDAA-IRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVARAGDAVYPAAKQG  166 (256)
T ss_pred             CCEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCCCCccHhHHHHHH
Confidence            99999999987767777788887 999999999999999999999998766 6899999999998888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++.++.+++++||++|.|+||+++|++.......++....+....|++++.+|+|++++++||+++.
T Consensus       167 ~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  237 (256)
T PRK06124        167 LTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPA  237 (256)
T ss_pred             HHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999986543333443444556678999999999999999999874

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=7e-37  Score=245.58  Aligned_cols=204  Identities=19%  Similarity=0.181  Sum_probs=172.9

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----C-CceEEEeecCCHHHHHHHHHhc----CCccE
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----P-NVQTVQVDLQDWARTRAAVSKV----GPVDV   84 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~D~~~~~~v~~~~~~~----g~id~   84 (238)
                      +++||||++|||+++|++|+ .|++|++++|+.++++++.++.    + .+.+++||++|+++++++++++    |++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            57899999999999999999 5999999999998877665443    2 3678999999999998887654    89999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||||.....+..+.+.++ +.+++++|+.+++.+++.++|.|.+++.+|+||++||..+..+.++...|+++|+|+++
T Consensus        81 lv~nag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~  159 (246)
T PRK05599         81 AVVAFGILGDQERAETDEAH-AVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDA  159 (246)
T ss_pred             EEEecCcCCCchhhhcCcHH-HHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHH
Confidence            99999987655555555565 78889999999999999999999876435899999999998888889999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++.|++++||+||+|+||+++|++.....             |.....+|+|+|+.+++++++.
T Consensus       160 ~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~-------------~~~~~~~pe~~a~~~~~~~~~~  214 (246)
T PRK05599        160 FCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK-------------PAPMSVYPRDVAAAVVSAITSS  214 (246)
T ss_pred             HHHHHHHHhcCCCceEEEecCCcccchhhcCCC-------------CCCCCCCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999864321             1111358999999999999874

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-37  Score=247.70  Aligned_cols=220  Identities=32%  Similarity=0.405  Sum_probs=183.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHH---HHHhhCCCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLD---SLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      ..++++||||++|||++++++|+++|++|++++|+.+..+   ++.+...++.++++|+++++++++++++    ++++|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4468899999999999999999999999999999875322   2322234577899999999999888765    48899


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-ccCCCCchhhHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-TALEGHTIYSASKAAL  162 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~~y~~sK~al  162 (238)
                      ++|||||.....++.+.+.++ +++.+++|+.+++.+++.++|.+.+++ .++||++||..+. .+.++...|+.+|+++
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~  162 (263)
T PRK08226         85 ILVNNAGVCRLGSFLDMSDED-RDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDMVADPGETAYALTKAAI  162 (263)
T ss_pred             EEEECCCcCCCCCcccCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcccCCCCcchHHHHHHHH
Confidence            999999987767777777777 999999999999999999999987665 6799999998874 4567788999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC------CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS------DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++.+++++||+||+|+||+++|++.+....      .++.........|++|+.+|+|+|+.+.||+++.
T Consensus       163 ~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~  238 (263)
T PRK08226        163 VGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDE  238 (263)
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCch
Confidence            999999999999999999999999999998754211      1112233445679999999999999999999874

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.7e-36  Score=244.07  Aligned_cols=218  Identities=21%  Similarity=0.258  Sum_probs=181.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHhc----CC-ccE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV----GP-VDV   84 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~----g~-id~   84 (238)
                      .++++||||+||||+++++.|++.|++|+++.+ +.+..+++....+ .+.++++|++++++++++++++    ++ +|+
T Consensus         5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~   84 (253)
T PRK08642          5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT   84 (253)
T ss_pred             CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence            367899999999999999999999999988654 5555655555443 5778999999999998888654    65 999


Q ss_pred             EEEccCCCC------CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHH
Q psy14567         85 LINNAAVAR------FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        85 li~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      +|||||...      ..++.+.+.++ |++.+++|+.+++.++++++|.+.+++ .|+|+++||..+..+..+...|+++
T Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~s  162 (253)
T PRK08642         85 VVNNALADFSFDGDARKKADDITWED-FQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQNPVVPYHDYTTA  162 (253)
T ss_pred             EEECCCccccccccCCCCcccCCHHH-HHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCCCCccchHHH
Confidence            999998632      13455667777 999999999999999999999997765 6899999998877777778899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++++++++.+++++||+||+|+||+++|++.... ..++..+.+....|++|+.+|+|+|+++.||+++.
T Consensus       163 K~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  235 (253)
T PRK08642        163 KAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA-TPDEVFDLIAATTPLRKVTTPQEFADAVLFFASPW  235 (253)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc-CCHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCch
Confidence            99999999999999999999999999999999865432 12333334456779999999999999999999874

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-36  Score=244.70  Aligned_cols=221  Identities=24%  Similarity=0.342  Sum_probs=188.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      .+.++++||||+||||.+++++|+++|++|++++|+.+..+++.+..    ..+.++.+|+++++++.+++++    +++
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR   87 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            34578899999999999999999999999999999988776655442    3578889999999999877754    488


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++||+||......+.+.+.++ ++.++++|+.+++.+.+++.|.|.+....+++|++||..+..+.++...|+++|++
T Consensus        88 id~vi~~Ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a  166 (263)
T PRK07814         88 LDIVVNNVGGTMPNPLLSTSTKD-LADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAA  166 (263)
T ss_pred             CCEEEECCCCCCCCChhhCCHHH-HHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHH
Confidence            99999999987666677777787 99999999999999999999999874336899999999998888999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++++.++.+ +|++|+|+||+++|++.......++....+....|+.+..+|+|+|+.++|++++.
T Consensus       167 ~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  236 (263)
T PRK07814        167 LAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPA  236 (263)
T ss_pred             HHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999999987 69999999999999986532222333334445678889999999999999999874

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.9e-36  Score=245.50  Aligned_cols=217  Identities=24%  Similarity=0.355  Sum_probs=185.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~li   86 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++++++...  ++.++.+|++|+++++++++++    +++|++|
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li   79 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASL--GVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLV   79 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            356889999999999999999999999999999999888776542  5788999999999998887654    7899999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||.....++.+.+.++ ++..+++|+.+++.+++.++|.+++++ .|+||++||..+..+.+....|+++|+++++++
T Consensus        80 ~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~  157 (273)
T PRK06182         80 NNAGYGSYGAIEDVPIDE-ARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYTPLGAWYHATKFALEGFS  157 (273)
T ss_pred             ECCCcCCCCchhhCCHHH-HHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCCCCccHhHHHHHHHHHHH
Confidence            999998777788888887 999999999999999999999998776 689999999988887788889999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCC-------CCC-------ccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-------DPA-------KAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-------~~~-------~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++++.++.+.||+++.|+||+++|++......       ...       ..+.+....+.+++.+|+|+|+.+.+++++
T Consensus       158 ~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~~  236 (273)
T PRK06182        158 DALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVTA  236 (273)
T ss_pred             HHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999998532110       000       011233445778999999999999999985

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-36  Score=243.38  Aligned_cols=220  Identities=17%  Similarity=0.158  Sum_probs=179.8

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHh----cC
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      ....++++||||++|||++++++|+++|++|++++|+.+.++++.++.    ..+.++++|++|++++.+++++    +|
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   82 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG   82 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            345678999999999999999999999999999999988776654432    3577889999999999888765    48


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++.+|+||++||..+..+.++...|+++|+
T Consensus        83 ~id~li~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  161 (275)
T PRK05876         83 HVDVVFSNAGIVVGGPIVEMTHDD-WRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKY  161 (275)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHH
Confidence            899999999988777788888888 9999999999999999999999987654689999999999989899999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCC--cc-----CCcccCCCCCCcCCCCCccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPA--KA-----GPMLAKTPLGRFAGKLKPKPWNRWLL  229 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~--~~-----~~~~~~~~~~r~~~~~~ia~~~~~l~  229 (238)
                      ++.+|+++++.+++++||+++.|+||+++|++.........  ..     ...........+.+|+|+|+.++-.+
T Consensus       162 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai  237 (275)
T PRK05876        162 GVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAI  237 (275)
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999998643211000  00     00111112234678999998876544

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=4.8e-36  Score=241.93  Aligned_cols=217  Identities=23%  Similarity=0.302  Sum_probs=181.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      ..++++||||+||||+++|++|+++|++|++++|++++.+++.+.. ..+.++++|+++++++++++++    +|++|++
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   88 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL   88 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4578999999999999999999999999999999987766665544 3577899999999998776654    4889999


Q ss_pred             EEccCCCCC--CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         86 INNAAVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        86 i~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      |||||....  .++.+.+.++ |+..+++|+.+++.+++++.|.|.++  .|+||++||..+..+.+....|+++|++++
T Consensus        89 i~~ag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~  165 (255)
T PRK05717         89 VCNAAIADPHNTTLESLSLAH-WNRVLAVNLTGPMLLAKHCAPYLRAH--NGAIVNLASTRARQSEPDTEAYAASKGGLL  165 (255)
T ss_pred             EECCCcccCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHc--CcEEEEEcchhhcCCCCCCcchHHHHHHHH
Confidence            999998743  4556677777 99999999999999999999999765  479999999999888888899999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++.++.+ +|++|+|+||+++|++..... ............|.+|.++|+|+++++.|++++.
T Consensus       166 ~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  232 (255)
T PRK05717        166 ALTHALAISLGP-EIRVNAVSPGWIDARDPSQRR-AEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQ  232 (255)
T ss_pred             HHHHHHHHHhcC-CCEEEEEecccCcCCcccccc-chHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            999999999987 499999999999999754321 1111122223568899999999999999999864

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-36  Score=244.48  Aligned_cols=215  Identities=23%  Similarity=0.300  Sum_probs=178.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~li   86 (238)
                      +.++++||||++|||++++++|+++|++|++++|+++..     ....+.++++|++|++++++++++    ++++|++|
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   82 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILV   82 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            346789999999999999999999999999999987542     123577899999999998877654    48899999


Q ss_pred             EccCCCC--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCC-CCchhhHHHHHHH
Q psy14567         87 NNAAVAR--FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALE-GHTIYSASKAALD  163 (238)
Q Consensus        87 ~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~~~~y~~sK~al~  163 (238)
                      ||||...  ..++.+.+.++ |++.+++|+.+++.++++++|.+.+++ .|+||++||..+..+.+ +...|+++|++++
T Consensus        83 ~~ag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~  160 (260)
T PRK06523         83 HVLGGSSAPAGGFAALTDEE-WQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPLPESTTAYAAAKAALS  160 (260)
T ss_pred             ECCcccccCCCCcccCCHHH-HHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCCCCcchhHHHHHHHH
Confidence            9999753  34556677777 999999999999999999999998776 68999999999887754 7889999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC---------CCCccC---CcccCCCCCCcCCCCCccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS---------DPAKAG---PMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~---------~~~~~~---~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +++++++.+++++||++|.|+||+++|++......         .++..+   ......|++|+++|+|+|+++.||+|+
T Consensus       161 ~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~  240 (260)
T PRK06523        161 TYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASD  240 (260)
T ss_pred             HHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999998642110         011111   112457999999999999999999987


Q ss_pred             c
Q psy14567        232 V  232 (238)
Q Consensus       232 ~  232 (238)
                      .
T Consensus       241 ~  241 (260)
T PRK06523        241 R  241 (260)
T ss_pred             c
Confidence            4

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2e-36  Score=241.16  Aligned_cols=213  Identities=26%  Similarity=0.313  Sum_probs=181.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ..++++||||++|||.+++++|+++|++|++++|+....     ...++..+++|++++  ++++.+.++++|++|||||
T Consensus         4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~D~~~~--~~~~~~~~~~id~lv~~ag   76 (235)
T PRK06550          4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----LSGNFHFLQLDLSDD--LEPLFDWVPSVDILCNTAG   76 (235)
T ss_pred             CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----cCCcEEEEECChHHH--HHHHHHhhCCCCEEEECCC
Confidence            346789999999999999999999999999999986432     123577899999987  7777788889999999999


Q ss_pred             CCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHH
Q psy14567         91 VAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTM  169 (238)
Q Consensus        91 ~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l  169 (238)
                      ... ..++.+.+.++ +++++++|+.+++.++++++|.+.+++ .++||++||..+..+.++...|+.+|++++++++++
T Consensus        77 ~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l  154 (235)
T PRK06550         77 ILDDYKPLLDTSLEE-WQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQL  154 (235)
T ss_pred             CCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHH
Confidence            763 24566677777 999999999999999999999998766 689999999999888888899999999999999999


Q ss_pred             HHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        170 ALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       170 ~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.++.++||++|.|+||+++|++....+.............|++|+.+|+|+|++++||+|+.
T Consensus       155 a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~  217 (235)
T PRK06550        155 ALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGK  217 (235)
T ss_pred             HHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChh
Confidence            999999999999999999999987543332222233445679999999999999999999874

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7e-36  Score=243.32  Aligned_cols=212  Identities=20%  Similarity=0.192  Sum_probs=179.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-------HHH----HHhhCCCceEEEeecCCHHHHHHHHHhc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-------LDS----LKQAFPNVQTVQVDLQDWARTRAAVSKV   79 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~----~~~~~~~~~~~~~D~~~~~~v~~~~~~~   79 (238)
                      +.++++||||++|||.++++.|+++|++|++++|+.+.       +++    +.....++.++++|+++++++.++++++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            44688999999999999999999999999999997642       222    2233346788999999999998877654


Q ss_pred             ----CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC--CCCc
Q psy14567         80 ----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL--EGHT  153 (238)
Q Consensus        80 ----g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~  153 (238)
                          +++|++|||||.....+..+.+.++ |++++++|+.+++.++++++|.|.+++ +|+|+++||..+..+.  ++..
T Consensus        85 ~~~~g~id~li~~ag~~~~~~~~~~~~~~-~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~~  162 (273)
T PRK08278         85 VERFGGIDICVNNASAINLTGTEDTPMKR-FDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLDPKWFAPHT  162 (273)
T ss_pred             HHHhCCCCEEEECCCCcCCCCcccCCHHH-HHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEECCchhccccccCCcc
Confidence                7899999999987777777788887 999999999999999999999998776 6899999998877665  7789


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCC-ceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPT-VVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|++||+++++++++++.|++++||+||+|+|| +++|++.+....         ...++++..+|+++|+.+++++++.
T Consensus       163 ~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~---------~~~~~~~~~~p~~va~~~~~l~~~~  233 (273)
T PRK08278        163 AYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLG---------GDEAMRRSRTPEIMADAAYEILSRP  233 (273)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccc---------ccccccccCCHHHHHHHHHHHhcCc
Confidence            999999999999999999999999999999999 689987554221         1235677899999999999999875


Q ss_pred             c
Q psy14567        233 G  233 (238)
Q Consensus       233 ~  233 (238)
                      .
T Consensus       234 ~  234 (273)
T PRK08278        234 A  234 (273)
T ss_pred             c
Confidence            3

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-36  Score=245.09  Aligned_cols=219  Identities=20%  Similarity=0.196  Sum_probs=184.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----C--CCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----F--PNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~--~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      ++++||||+|+||.+++++|++.|++|++++|+.+..+++.+.    .  ..+.++.+|+++++++.++++++    +++
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   82 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV   82 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999998776555433    2  25788999999999998877654    889


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||.....++.+.+.++ |+..+++|+.+++.+.+++.+.|.+++..+++|++||..+..+.+...+|+++|+++
T Consensus        83 d~vv~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~  161 (259)
T PRK12384         83 DLLVYNAGIAKAAFITDFQLGD-FDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG  161 (259)
T ss_pred             CEEEECCCcCCCCCcccCCHHH-HHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHH
Confidence            9999999988777777888887 999999999999999999999998765357999999998888878889999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCce-ecCcccCCCC---------CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVV-MTQMGRTGWS---------DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v-~t~~~~~~~~---------~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++.+++++||++|.|.||.+ .|++......         .++..+......|++|+.+++|++++++||+++.
T Consensus       162 ~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~  241 (259)
T PRK12384        162 VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK  241 (259)
T ss_pred             HHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999975 6666432211         1222233445679999999999999999999864

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=3.8e-36  Score=240.12  Aligned_cols=213  Identities=23%  Similarity=0.312  Sum_probs=178.9

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCC-hHhHHHHH----hhCCCceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKT-QANLDSLK----QAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~----~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      ++||||++|||.++|++|+++|++|++++|+ .+..++..    +...++.++++|+++++++.+++++    ++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5789999999999999999999999888765 34443333    3334688999999999999887754    4889999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVS-KTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      |||+|.....++.+.+.++ |+.++++|+.+++.++++++ |.+.+++ .+++|++||..+..+.++...|+++|+++++
T Consensus        81 i~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  158 (239)
T TIGR01831        81 VLNAGITRDAAFPALSEED-WDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGNRGQVNYSAAKAGLIG  158 (239)
T ss_pred             EECCCCCCCCchhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCCCCCcchHHHHHHHHH
Confidence            9999988766666777787 99999999999999999875 5544444 6899999999998888899999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++.++.++||++|.|+||+++|++..+.   ++..+......|++|+++|+|+++++.||+++.
T Consensus       159 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  223 (239)
T TIGR01831       159 ATKALAVELAKRKITVNCIAPGLIDTEMLAEV---EHDLDEALKTVPMNRMGQPAEVASLAGFLMSDG  223 (239)
T ss_pred             HHHHHHHHHhHhCeEEEEEEEccCccccchhh---hHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCch
Confidence            99999999999999999999999999997643   122223445689999999999999999999874

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.6e-36  Score=241.12  Aligned_cols=219  Identities=25%  Similarity=0.286  Sum_probs=185.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEE-ecCChHhHHHHHh----hCCCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIA-LSKTQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      .++++||||+||||++++++|+++|++|++ ..|+.+..+++.+    ...++.++.+|++|++++.++++++    +++
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRL   83 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999876 5787766554433    3346888999999999998887655    789


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||+|.....++.+.+.++ ++..+++|+.+++.++++++|.+.+++ .|+||++||..+..+.++...|+++|+++
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~~sK~a~  161 (250)
T PRK08063         84 DVFVNNAASGVLRPAMELEESH-WDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIRYLENYTTVGVSKAAL  161 (250)
T ss_pred             CEEEECCCCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCCCccHHHHHHHHH
Confidence            9999999987767777888887 999999999999999999999998766 68999999998877888889999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++.++.+.||++|+|.||+++|++........+.........|.+++.+++|+|+.+.+++++.
T Consensus       162 ~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~  231 (250)
T PRK08063        162 EALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPE  231 (250)
T ss_pred             HHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCch
Confidence            9999999999999999999999999999986543222233333445567888999999999999999864

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-36  Score=242.82  Aligned_cols=220  Identities=23%  Similarity=0.277  Sum_probs=183.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      ...++++||||+||||.+++++|++.|++|++++|+.+.+++..+.    ..+..++++|++++++++++++++    ++
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3456889999999999999999999999999999998776554332    235678899999999998887654    78


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||.....++.+.+.++ |++.+++|+.+++.++++++|.+.++  +|+|+++||..+..+.++...|+++|++
T Consensus        87 iD~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~g~~~l~~~~~~~l~~~--~g~iv~iss~~~~~~~~~~~~Y~asK~a  163 (264)
T PRK07576         87 IDVLVSGAAGNFPAPAAGMSANG-FKTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQISAPQAFVPMPMQAHVCAAKAG  163 (264)
T ss_pred             CCEEEECCCCCCCCccccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhC--CCEEEEECChhhccCCCCccHHHHHHHH
Confidence            99999999977666677777787 99999999999999999999998754  4799999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCcee-cCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVM-TQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+++++.++.++||+++.|+||+++ |+........+.....+....|++|+.+|+|+|+.+.||+++.
T Consensus       164 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  235 (264)
T PRK07576        164 VDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDM  235 (264)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChh
Confidence            9999999999999999999999999997 5543332222222223334568899999999999999999874

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=5.4e-36  Score=241.27  Aligned_cols=219  Identities=25%  Similarity=0.301  Sum_probs=186.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      ++++||||+|+||.+++++|++.|++|++++|+.+..+++.++    ..++.++.+|++|++++.+++++    ++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999999999999999999999999999998766554433    33578899999999999887654    478999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||+|.....++.+.+.++ |++.+++|+.+++.+++.+++.+.+.+.+++++++||..+..+.+....|+.+|+++++
T Consensus        81 vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  159 (254)
T TIGR02415        81 MVNNAGVAPITPILEITEEE-LKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG  159 (254)
T ss_pred             EEECCCcCCCCCcccCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence            99999987777777888888 99999999999999999999999886545899999999998888899999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC---------CCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD---------PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++.++.++++.||+++.++||+++|++.+.....         ....+.+....|.+|+.+|+|+++++.||+++.
T Consensus       160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  236 (254)
T TIGR02415       160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASED  236 (254)
T ss_pred             HHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccc
Confidence            99999999999999999999999999986432211         011222345678999999999999999999875

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-36  Score=236.55  Aligned_cols=207  Identities=20%  Similarity=0.182  Sum_probs=169.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cC-C
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VG-P   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g-~   81 (238)
                      +.++++||||++|||++++++|+++|++|++++|++++++++.++    ...+..+.+|+++++++++++++    +| +
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            346889999999999999999999999999999999887766443    34577789999999999887754    47 8


Q ss_pred             ccEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         82 VDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        82 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      +|++|||||... ..++.+.+.++ |.+.+++|+.+++.+++.++|+|.+++.+|+||++||..+.   ++...|+++|+
T Consensus        84 iD~li~nag~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~asKa  159 (227)
T PRK08862         84 PDVLVNNWTSSPLPSLFDEQPSES-FIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESSNA  159 (227)
T ss_pred             CCEEEECCccCCCCCccccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHHHH
Confidence            999999998643 34667777777 89999999999999999999999876446899999997653   45678999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLNW  236 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~~~  236 (238)
                      |+.+|+++++.|++++|||||+|+||+++|+....    ++.+..          . .+|++.++.||+|..-+-|
T Consensus       160 al~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~----~~~~~~----------~-~~~~~~~~~~l~~~~~~tg  220 (227)
T PRK08862        160 LVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELD----AVHWAE----------I-QDELIRNTEYIVANEYFSG  220 (227)
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccC----HHHHHH----------H-HHHHHhheeEEEecccccc
Confidence            99999999999999999999999999999984211    110000          0 1799999999998754443

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-35  Score=240.79  Aligned_cols=208  Identities=26%  Similarity=0.246  Sum_probs=183.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLIN   87 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~li~   87 (238)
                      .++++|||||||||++++++|+++|++|++++|+.+.++++.+..+.+.++.+|++|+++++++++++    +++|++||
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46789999999999999999999999999999999988887766666888999999999988877654    78999999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHH
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITR  167 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~  167 (238)
                      |||+....++.+.+.++ +++++++|+.+++.+++.++|.+.+++ .|+||++||..+..+.++...|+++|+++.++++
T Consensus        85 ~ag~~~~~~~~~~~~~~-~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  162 (273)
T PRK07825         85 NAGVMPVGPFLDEPDAV-TRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIPVPGMATYCASKHAVVGFTD  162 (273)
T ss_pred             CCCcCCCCccccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCCCCCCcchHHHHHHHHHHHH
Confidence            99998777777888887 999999999999999999999998877 6899999999999999999999999999999999


Q ss_pred             HHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        168 TMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       168 ~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++.++.+.||+++.|+||+++|++......           ....+..+|+|+|+.+.+++.+.
T Consensus       163 ~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~-----------~~~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        163 AARLELRGTGVHVSVVLPSFVNTELIAGTGG-----------AKGFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             HHHHHhhccCcEEEEEeCCcCcchhhccccc-----------ccCCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999998643210           01123678999999999888764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=8e-36  Score=239.26  Aligned_cols=218  Identities=26%  Similarity=0.375  Sum_probs=182.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEec-CChHhHH----HHHhhCCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALS-KTQANLD----SLKQAFPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~----~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||++|||++++++|+++|++|++.. |+....+    ++......+..+.+|++|.+++.+++++    +++
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE   81 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            357889999999999999999999999988754 4443332    3333334577789999999999887765    488


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||.....++.+.+.++ |++++++|+.+++.++++++|.+.+++ .++||++||..+..+.++...|+++|++
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sK~a  159 (246)
T PRK12938         82 IDVLVNNAGITRDVVFRKMTRED-WTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQFGQTNYSTAKAG  159 (246)
T ss_pred             CCEEEECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCCCCCChhHHHHHHH
Confidence            99999999987666677777887 999999999999999999999998765 6899999999988888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++++.++.+.||++|.|+||+++|++.+..  .++.........|.+++.++++++++++||+++.
T Consensus       160 ~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~  228 (246)
T PRK12938        160 IHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEE  228 (246)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc--ChHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999987542  2222233344568889999999999999999874

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-35  Score=247.63  Aligned_cols=218  Identities=21%  Similarity=0.255  Sum_probs=185.3

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----c
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      +..+.++++||||+||||++++++|+++|++|++++|+.++++++.++    ..++.++++|++|++++++++++    +
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            345567899999999999999999999999999999999877665443    34678899999999999887754    5


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      |++|++|||||.....++.+.+.++ +++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.+....|+++|
T Consensus        84 g~iD~lInnAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~asK  161 (334)
T PRK07109         84 GPIDTWVNNAMVTVFGPFEDVTPEE-FRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSIPLQSAYCAAK  161 (334)
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCCCcchHHHHHH
Confidence            8999999999987777778888888 999999999999999999999998876 68999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHhCC--CCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGP--YNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~--~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++|+++++.|+..  .+|+++.|+||.++|++.....  .. ..  ....|..++.+|+|+|+.+++++++.
T Consensus       162 ~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~--~~-~~--~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        162 HAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWAR--SR-LP--VEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhh--hh-cc--ccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999975  4799999999999999754311  00 10  12235567889999999999999875

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.7e-36  Score=263.47  Aligned_cols=221  Identities=27%  Similarity=0.340  Sum_probs=188.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.++++++.++. .++.++++|+++++++++++++    ++++|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4578999999999999999999999999999999999888776654 3577899999999999888765    4899999


Q ss_pred             EEccCCCC--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         86 INNAAVAR--FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        86 i~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      |||||+..  ..++.+.+.++ |++++++|+.+++.++++++|+|.+++.+++||++||..+..+.++...|+++|++++
T Consensus        84 i~nag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~  162 (520)
T PRK06484         84 VNNAGVTDPTMTATLDTTLEE-FARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVI  162 (520)
T ss_pred             EECCCcCCCCCcccccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHH
Confidence            99999843  24566777887 9999999999999999999999987653349999999999999899999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCc-cCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK-AGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++.|+.++||+||.|+||+++|++.......... ........|++++.+|+|+++.+.||+++.
T Consensus       163 ~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~  232 (520)
T PRK06484        163 SLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQ  232 (520)
T ss_pred             HHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999987543221111 122334568889999999999999999864

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-35  Score=239.79  Aligned_cols=221  Identities=26%  Similarity=0.397  Sum_probs=188.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      ...++++||||+||||+++++.|+++|++|++++|+.++++++...    ..++.++.+|+++++++++++++    +++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            3457889999999999999999999999999999999887766543    24578899999999999887765    478


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-------CceEEEEccccccccCCCCch
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI-------QGSIVNVSSIAGKTALEGHTI  154 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-------~g~iv~isS~~~~~~~~~~~~  154 (238)
                      +|++|||+|.....++.+.+.++ |+.++++|+.+++.+++++.|.+.++..       .+++|++||..+..+.+...+
T Consensus        87 ~d~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  165 (258)
T PRK06949         87 IDILVNNSGVSTTQKLVDVTPAD-FDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGL  165 (258)
T ss_pred             CCEEEECCCCCCCCCcccCCHHH-HHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccH
Confidence            99999999987666677777777 9999999999999999999999876541       479999999998888888899


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++|++++.++++++.+++++||++|.|+||+++|++....+.. +.........|.+|++.|+|+++.+.||+++.
T Consensus       166 Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~  242 (258)
T PRK06949        166 YCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET-EQGQKLVSMLPRKRVGKPEDLDGLLLLLAADE  242 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh-HHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh
Confidence            999999999999999999999999999999999999997654332 22233455678899999999999999999864

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-36  Score=241.23  Aligned_cols=219  Identities=22%  Similarity=0.288  Sum_probs=185.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      ..++++||||++|||++++++|+++|++|++++|+++..+++..+.    .++.++.+|++++++++++++++    +++
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV   83 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence            3467899999999999999999999999999999988776665443    35788999999999998877554    889


Q ss_pred             cEEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         83 DVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        83 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      |++|||||...+ .++.+.+.++ |++.+++|+.+++.+++++.+.+.+.  +++||++||..+..+.++...|+++|++
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~~~~~~~~Y~~sK~a  160 (258)
T PRK07890         84 DALVNNAFRVPSMKPLADADFAH-WRAVIELNVLGTLRLTQAFTPALAES--GGSIVMINSMVLRHSQPKYGAYKMAKGA  160 (258)
T ss_pred             cEEEECCccCCCCCCcccCCHHH-HHHHHHhhhHHHHHHHHHHHHHHHhC--CCEEEEEechhhccCCCCcchhHHHHHH
Confidence            999999998643 5566677777 99999999999999999999998765  3799999999988888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC---------CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS---------DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++.++++++.+++++||++|.|+||++.|++......         .++.........|++++.+|+|+++++.|++++.
T Consensus       161 ~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~  240 (258)
T PRK07890        161 LLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDL  240 (258)
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHh
Confidence            9999999999999999999999999999997543211         1222333445678899999999999999999863

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=1.5e-35  Score=238.37  Aligned_cols=215  Identities=28%  Similarity=0.378  Sum_probs=184.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~li   86 (238)
                      +.++++||||+|+||++++++|+++|++|++++|+.     .......+.++++|+++++++++++++    ++++|++|
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLV   81 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            456889999999999999999999999999999987     222234678899999999999888765    47899999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||+|.....+..+.+.++ +++.+++|+.+++.+++++.|.+.+++ .++|+++||..+..+.++...|+++|+++++++
T Consensus        82 ~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~  159 (252)
T PRK08220         82 NAAGILRMGATDSLSDED-WQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHVPRIGMAAYGASKAALTSLA  159 (252)
T ss_pred             ECCCcCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhccCCCCCchhHHHHHHHHHHH
Confidence            999988777777777777 999999999999999999999998766 689999999998888888899999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCC--------ccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPA--------KAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~--------~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.++.++||++|.|.||+++|++....+..+.        ..+.+....|++++.+|+|+|++++||+++.
T Consensus       160 ~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  233 (252)
T PRK08220        160 KCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLASDL  233 (252)
T ss_pred             HHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhcch
Confidence            99999999999999999999999998654322211        1123345678899999999999999999864

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-35  Score=238.17  Aligned_cols=217  Identities=28%  Similarity=0.309  Sum_probs=184.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHhc----CCccEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV----GPVDVLI   86 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~----g~id~li   86 (238)
                      .++++||||+||||++++++|+++|++|++++|+.+.++++.++.+ .+.++++|+++.+++.++++.+    +++|++|
T Consensus         6 ~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   85 (249)
T PRK06500          6 GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVF   85 (249)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            4578999999999999999999999999999999888777766543 5778899999999987776543    7899999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||.....++.+.+.++ ++..+++|+.+++.+++++.|.|..   .+++++++|..+..+.+...+|+.+|+++++++
T Consensus        86 ~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~  161 (249)
T PRK06500         86 INAGVAKFAPLEDWDEAM-FDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGSINAHIGMPNSSVYAASKAALLSLA  161 (249)
T ss_pred             ECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEechHhccCCCCccHHHHHHHHHHHHH
Confidence            999987666666777787 9999999999999999999999854   468999999888888888999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC----CccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP----AKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.++.++||+++.|+||+++|++.+.....+    .....+....|++++.+|+|+++++.||+++.
T Consensus       162 ~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  231 (249)
T PRK06500        162 KTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDE  231 (249)
T ss_pred             HHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999865321111    11223345568899999999999999999864

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-35  Score=238.87  Aligned_cols=220  Identities=22%  Similarity=0.287  Sum_probs=182.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~li   86 (238)
                      ..++++||||+||||.+++++|+++|++|++++|+....++..+.... .++++|++++++++++++++    +++|++|
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   84 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGG-LFVPTDVTDEDAVNALFDTAAETYGSVDIAF   84 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC-cEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            346789999999999999999999999999999998887776655433 67899999999998888754    7899999


Q ss_pred             EccCCCCC--CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-CCCchhhHHHHHHH
Q psy14567         87 NNAAVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-EGHTIYSASKAALD  163 (238)
Q Consensus        87 ~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~~y~~sK~al~  163 (238)
                      ||||...+  .++.+.+.++ ++..+++|+.+++.+++.++|.+.+++ .++||++||..+..+. ++...|+.+|++++
T Consensus        85 ~~ag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~  162 (255)
T PRK06057         85 NNAGISPPEDDSILNTGLDA-WQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGSATSQISYTASKGGVL  162 (255)
T ss_pred             ECCCcCCCCCCCcccCCHHH-HHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCCCCCCcchHHHHHHHH
Confidence            99997643  3455666777 999999999999999999999998766 6899999998776655 46788999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-CCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      ++++.++.++.++||+++.|+||+++|++....+.. ++.........|.+++.+|+|+++++.||+++..
T Consensus       163 ~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  233 (255)
T PRK06057        163 AMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDA  233 (255)
T ss_pred             HHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999986543221 1111222335688899999999999999999864

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-35  Score=236.12  Aligned_cols=221  Identities=40%  Similarity=0.547  Sum_probs=192.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      .+.++++||||+||||+++++.|+++|++|++++|+.++.+++.+.. +..++.+|++++++++++++..+++|++|||+
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~a   85 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-GCEPLRLDVGDDAAIRAALAAAGAFDGLVNCA   85 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-CCeEEEecCCCHHHHHHHHHHhCCCCEEEECC
Confidence            34567899999999999999999999999999999998887776654 36678999999999999998888999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHH
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTM  169 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l  169 (238)
                      |.....+..+.+.++ +++.+++|+.+++.+++++.+.+.+++..++||++||..+..+.++...|+.+|++++.+++.+
T Consensus        86 g~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~  164 (245)
T PRK07060         86 GIASLESALDMTAEG-FDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVL  164 (245)
T ss_pred             CCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHH
Confidence            987766666777777 9999999999999999999999876543479999999998888888899999999999999999


Q ss_pred             HHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        170 ALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       170 ~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.++.+.||+++.++||++.|++....+..+.....+....|.+++.+++|+++++.+++++.
T Consensus       165 a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  227 (245)
T PRK07060        165 CVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDA  227 (245)
T ss_pred             HHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            999998999999999999999986544444434444556678899999999999999999875

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=2e-35  Score=239.88  Aligned_cols=216  Identities=26%  Similarity=0.275  Sum_probs=169.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHHhhC-----CCceEEEeecCCHHHHH----HHH----Hh
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLKQAF-----PNVQTVQVDLQDWARTR----AAV----SK   78 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~----~~~----~~   78 (238)
                      ++++||||++|||++++++|+++|++|+++.| +++.++++.++.     ....++++|++|++++.    +++    +.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            57899999999999999999999999998765 455665554433     24667899999987653    333    34


Q ss_pred             cCCccEEEEccCCCCCCCCCCCChH----------HHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCceEEEEccc
Q psy14567         79 VGPVDVLINNAAVARFDRFLDIDEE----------NLIDSIFDVNIKAVINISQVVSKTMIDHK-----IQGSIVNVSSI  143 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~~~~~~~~----------~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~  143 (238)
                      +|++|+||||||...+.++.+.+.+          +.|.+++++|+.+++.+++++.|.+....     ..++|++++|.
T Consensus        82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~  161 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA  161 (267)
T ss_pred             cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence            5889999999998655444333321          13889999999999999999999986531     24689999999


Q ss_pred             cccccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCC-CcCCCCCcc
Q psy14567        144 AGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLG-RFAGKLKPK  222 (238)
Q Consensus       144 ~~~~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~ia  222 (238)
                      .+..+.++..+|++||+++++++++++.|+.++||++|.|+||+++|+...    ..+....+....|++ |+.+|+|++
T Consensus       162 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va  237 (267)
T TIGR02685       162 MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM----PFEVQEDYRRKVPLGQREASAEQIA  237 (267)
T ss_pred             hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc----chhHHHHHHHhCCCCcCCCCHHHHH
Confidence            988888889999999999999999999999999999999999999876321    112222233445665 789999999


Q ss_pred             cccccccccc
Q psy14567        223 PWNRWLLPSV  232 (238)
Q Consensus       223 ~~~~~l~s~~  232 (238)
                      +.++||+++.
T Consensus       238 ~~~~~l~~~~  247 (267)
T TIGR02685       238 DVVIFLVSPK  247 (267)
T ss_pred             HHHHHHhCcc
Confidence            9999999874

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.3e-35  Score=236.24  Aligned_cols=216  Identities=24%  Similarity=0.319  Sum_probs=182.6

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCC-hHhHHHHHhhCC------CceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKT-QANLDSLKQAFP------NVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      ++||||+||||.++++.|+++|++|++++|+ .+.++++.+...      ....+++|+++++++++++++    ++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            6889999999999999999999999999998 666665544331      244678999999999887755    48899


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||.....++.+.+.++ +++++++|+.+++.+++.++|.+.+.+ .++|+++||..+..+.++...|+++|++++
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~  159 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQIELDE-WRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAEPDYTAYNASKAAVA  159 (251)
T ss_pred             EEEECCCcCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCCCCCchhHHHHHHHH
Confidence            999999988777777778887 999999999999999999999998766 689999999999888888999999999999


Q ss_pred             HHHHHHHHHhCCCC--eEEEEEeCCceecCcccCCC---CCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYN--IRVNSVQPTVVMTQMGRTGW---SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~--i~v~~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .++++++.++.+++  |+++.|+||+++|++.....   ..++.........|.+++.+|+|++++++||+++.
T Consensus       160 ~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        160 SLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             HHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999997665  99999999999999875321   12223334445678899999999999999998874

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-35  Score=231.67  Aligned_cols=194  Identities=18%  Similarity=0.149  Sum_probs=162.9

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEEccCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLINNAAVAR   93 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~~ag~~~   93 (238)
                      ++||||++|||+++++.|+++|++|++++|+.++++++.++. +...+++|++++++++++++++ +++|++|||+|...
T Consensus         3 vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~~~   81 (223)
T PRK05884          3 VLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-DVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAPSW   81 (223)
T ss_pred             EEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCccc
Confidence            689999999999999999999999999999998887776554 4678899999999999998876 46999999998531


Q ss_pred             C------CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHH
Q psy14567         94 F------DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITR  167 (238)
Q Consensus        94 ~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~  167 (238)
                      .      .++.+ +.++ |++++++|+.+++.++++++|.|.+   +|+||++||..    .+....|+++|+|+.+|++
T Consensus        82 ~~~~~~~~~~~~-~~~~-~~~~~~~N~~~~~~~~~~~~~~~~~---~g~Iv~isS~~----~~~~~~Y~asKaal~~~~~  152 (223)
T PRK05884         82 DAGDPRTYSLAD-TANA-WRNALDATVLSAVLTVQSVGDHLRS---GGSIISVVPEN----PPAGSAEAAIKAALSNWTA  152 (223)
T ss_pred             cCCCCcccchhc-CHHH-HHHHHHHHHHHHHHHHHHHHHHhhc---CCeEEEEecCC----CCCccccHHHHHHHHHHHH
Confidence            1      12223 3455 9999999999999999999999964   48999999876    2456799999999999999


Q ss_pred             HHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        168 TMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       168 ~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++.|++++|||||+|+||+++|++....           ...|.   .+|+|+++.+.||+|+.
T Consensus       153 ~la~e~~~~gI~v~~v~PG~v~t~~~~~~-----------~~~p~---~~~~~ia~~~~~l~s~~  203 (223)
T PRK05884        153 GQAAVFGTRGITINAVACGRSVQPGYDGL-----------SRTPP---PVAAEIARLALFLTTPA  203 (223)
T ss_pred             HHHHHhhhcCeEEEEEecCccCchhhhhc-----------cCCCC---CCHHHHHHHHHHHcCch
Confidence            99999999999999999999999874321           11233   38999999999999874

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.6e-35  Score=261.40  Aligned_cols=221  Identities=24%  Similarity=0.210  Sum_probs=186.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      .+..+++||||+||||++++++|+++|++|++++|+.++++++.+.    ..++.++++|++|++++.++++++    |+
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4567889999999999999999999999999999998877665443    346788999999999998887654    78


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||+....++.+.+.++ +++++++|+.+++.++++++|.|.+++.+|+||++||.++..+.++...|++||++
T Consensus       393 id~lv~~Ag~~~~~~~~~~~~~~-~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa  471 (582)
T PRK05855        393 PDIVVNNAGIGMAGGFLDTSAED-WDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAA  471 (582)
T ss_pred             CcEEEECCccCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHH
Confidence            99999999998777778888887 99999999999999999999999887645899999999999988999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC---Cc---cCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP---AK---AGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~---~~---~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +++++++++.|++++||+|++|+||+++|+|.....-..   +.   ........+..+..+|+++|+.++++++.
T Consensus       472 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~  547 (582)
T PRK05855        472 VLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKR  547 (582)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHc
Confidence            999999999999999999999999999999876532110   00   00111222334556899999999999876

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=6.9e-35  Score=233.49  Aligned_cols=218  Identities=24%  Similarity=0.375  Sum_probs=186.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      +.++++||||+||||++++++|+++|+.|++.+|+.+.++++.+.. .++.++.+|+++.+++++++++    ++++|++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4568999999999999999999999999999999988887765543 3578889999999999887755    4889999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||.....+..+.+.++ |++++++|+.+++.+++++.+.+.+++ .+++|++||..+..+.++...|+.+|+++.++
T Consensus        85 i~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~  162 (245)
T PRK12936         85 VNNAGITKDGLFVRMSDED-WDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGNPGQANYCASKAGMIGF  162 (245)
T ss_pred             EECCCCCCCCccccCCHHH-HHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcCCCCCcchHHHHHHHHHH
Confidence            9999987666666777777 999999999999999999999887655 68999999998888888889999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++.++.++.+.|+++++|+||+++|++....  .+...+......|.+|+++|+|+++++.||+++.
T Consensus       163 ~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~  227 (245)
T PRK12936        163 SKSLAQEIATRNVTVNCVAPGFIESAMTGKL--NDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSE  227 (245)
T ss_pred             HHHHHHHhhHhCeEEEEEEECcCcCchhccc--ChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999986442  1222222334568899999999999999999864

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-35  Score=237.83  Aligned_cols=218  Identities=29%  Similarity=0.343  Sum_probs=178.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhH---HHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANL---DSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id   83 (238)
                      ..++++||||+||||++++++|++.|++|++++|+++..   +++.+...++.++++|++++++++++++++    +++|
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID   85 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            446889999999999999999999999999999988765   223333456889999999999998877654    7899


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||......+.+.+ ++ |+..+++|+.+++.+.+.+.|.+.++  .++|+++||..+..+.++..+|+++|++++
T Consensus        86 ~vi~~ag~~~~~~~~~~~-~~-~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~  161 (258)
T PRK08628         86 GLVNNAGVNDGVGLEAGR-EA-FVASLERNLIHYYVMAHYCLPHLKAS--RGAIVNISSKTALTGQGGTSGYAAAKGAQL  161 (258)
T ss_pred             EEEECCcccCCCcccCCH-HH-HHHHHhhhhHHHHHHHHHHHHHhhcc--CcEEEEECCHHhccCCCCCchhHHHHHHHH
Confidence            999999976544444444 66 99999999999999999999988654  479999999999888888999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC---CCC-CccCCcccCCCCC-CcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW---SDP-AKAGPMLAKTPLG-RFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~---~~~-~~~~~~~~~~~~~-r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++.++.++||++|.|+||.++|++.+...   ..+ ..........|.+ ++.+|+|+|+++.|++++.
T Consensus       162 ~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  235 (258)
T PRK08628        162 ALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSER  235 (258)
T ss_pred             HHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChh
Confidence            9999999999999999999999999999854321   111 1111222344654 8899999999999999874

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=231.73  Aligned_cols=216  Identities=22%  Similarity=0.203  Sum_probs=183.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      .+++++||||+||||++++++|+++|++|++++|+.+..+++.+.    ..++.++++|+++++++.++++.    ++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999999998876665443    24678899999999998777755    4789


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||+|.....+..+.+.++ ++.++++|+.+++.+++.+++.+.+++ .+++|++||..+..+.++...|+.+|+++
T Consensus        85 d~lv~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~~~  162 (241)
T PRK07454         85 DVLINNAGMAYTGPLLEMPLSD-WQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAFPQWGAYCVSKAAL  162 (241)
T ss_pred             CEEEECCCccCCCchhhCCHHH-HHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCCCCccHHHHHHHHH
Confidence            9999999988766667777777 999999999999999999999998766 68999999999888888889999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLNW  236 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~~~  236 (238)
                      +.++++++.+++++||+++.|.||+++|++....    ....    .....+..+++|+|+.+.+++++..-.|
T Consensus       163 ~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~----~~~~----~~~~~~~~~~~~va~~~~~l~~~~~~~~  228 (241)
T PRK07454        163 AAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE----TVQA----DFDRSAMLSPEQVAQTILHLAQLPPSAV  228 (241)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCcccCCccccc----cccc----ccccccCCCHHHHHHHHHHHHcCCccce
Confidence            9999999999999999999999999999985431    1111    1122456899999999999999875444

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=6.6e-35  Score=242.21  Aligned_cols=218  Identities=19%  Similarity=0.176  Sum_probs=175.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~li   86 (238)
                      +.++++||||+||||.+++++|+++|++|++++|+.++.++..++...+.++++|++|.++++++++++    +++|++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            457899999999999999999999999999999999888777666656889999999999998888654    7899999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc------------cCCCCch
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT------------ALEGHTI  154 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~  154 (238)
                      ||||+....  .+.+.++ |+..+++|+.+++.+++.++|.+.+++ .++||++||..+..            +.++...
T Consensus       105 ~nAg~~~~~--~~~~~~~-~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~  180 (315)
T PRK06196        105 NNAGVMACP--ETRVGDG-WEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWDDPHFTRGYDKWLA  180 (315)
T ss_pred             ECCCCCCCC--CccCCcc-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCccccCccCCCChHHH
Confidence            999976432  2344555 899999999999999999999998765 58999999976532            2334568


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcc--cCCCCC-CcCCCCCccccccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPML--AKTPLG-RFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~--~~~~~~-r~~~~~~ia~~~~~l~s~  231 (238)
                      |+.||++++.+++.++.+++++||++|+|+||+++|++...............  ...|++ ++.+|+|+|..++||+++
T Consensus       181 Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  260 (315)
T PRK06196        181 YGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAATS  260 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999998654321111100011  112343 678999999999999976


Q ss_pred             c
Q psy14567        232 V  232 (238)
Q Consensus       232 ~  232 (238)
                      .
T Consensus       261 ~  261 (315)
T PRK06196        261 P  261 (315)
T ss_pred             C
Confidence            4

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-35  Score=238.50  Aligned_cols=219  Identities=22%  Similarity=0.275  Sum_probs=186.9

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHhc----CCccEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV----GPVDVLI   86 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~----g~id~li   86 (238)
                      .++++||||+||||++++++|+++|++|++++|+.+.++++.+..+ .+..+++|++|+++++++++++    +++|++|
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3578999999999999999999999999999999988877766543 5778899999999998877654    7899999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||.....++.+.+.++ |++.+++|+.+++.+++.++|.+++++ .+++|++||..+..+.++...|+.+|+++++++
T Consensus        83 ~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~  160 (275)
T PRK08263         83 NNAGYGLFGMIEEVTESE-ARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAFPMSGIYHASKWALEGMS  160 (275)
T ss_pred             ECCCCccccccccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCCCCccHHHHHHHHHHHHH
Confidence            999998777888888887 999999999999999999999998776 689999999999888888999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC-------CccCCcccCCCCCCc-CCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP-------AKAGPMLAKTPLGRF-AGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~r~-~~~~~ia~~~~~l~s~~  232 (238)
                      +.++.++++.||+++.++||+++|++........       .....+....+.+++ ++|+|+++.+.++++..
T Consensus       161 ~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~  234 (275)
T PRK08263        161 EALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAE  234 (275)
T ss_pred             HHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCC
Confidence            9999999999999999999999999874221111       111122333466777 99999999999998863

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-35  Score=235.97  Aligned_cols=222  Identities=28%  Similarity=0.341  Sum_probs=184.1

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHh----c
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      ...+.++++||||+||||.+++++|+++|++|++++|+.++.+...+..    .++.++++|++|++++++++++    +
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            3445678999999999999999999999999999999988766554332    3577899999999999777655    4


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHH-HHhccCCceEEEEccccccccCCC----Cch
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT-MIDHKIQGSIVNVSSIAGKTALEG----HTI  154 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~~g~iv~isS~~~~~~~~~----~~~  154 (238)
                      +++|++|||||.....+..+.+.++ |++.+++|+.+++.+++++.+. +.+++ .+++|++||..+..+.++    ..+
T Consensus        88 ~~id~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~~~~~~~~~~  165 (259)
T PRK08213         88 GHVDILVNNAGATWGAPAEDHPVEA-WDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGNPPEVMDTIA  165 (259)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHH-HHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCccccCcch
Confidence            7899999999986555666667777 9999999999999999999998 66554 579999999876654433    489


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      |+.+|+++++++++++.+++++||++|.++||+++|++.....  +...+.+....|.+++++|+|+++++.||+++.+
T Consensus       166 Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  242 (259)
T PRK08213        166 YNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTL--ERLGEDLLAHTPLGRLGDDEDLKGAALLLASDAS  242 (259)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhh--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence            9999999999999999999999999999999999999865432  2222334567788999999999999999998753

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-35  Score=238.95  Aligned_cols=217  Identities=26%  Similarity=0.306  Sum_probs=181.3

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH-hHHHHHh----hCCCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA-NLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      .++++||||++|||.+++++|+++|++|++++|+.+ ..+.+.+    ...++.++.+|++++++++++++++    +++
T Consensus        46 ~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~i  125 (290)
T PRK06701         46 GKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRL  125 (290)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            467899999999999999999999999999998753 2333222    2235778999999999998877654    789


Q ss_pred             cEEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         83 DVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        83 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      |++|||||.... .++.+.+.++ |...+++|+.+++.+++++++.|.+   .+++|++||..+..+.+....|+++|++
T Consensus       126 D~lI~~Ag~~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~a~~~~~~~---~g~iV~isS~~~~~~~~~~~~Y~~sK~a  201 (290)
T PRK06701        126 DILVNNAAFQYPQQSLEDITAEQ-LDKTFKTNIYSYFHMTKAALPHLKQ---GSAIINTGSITGYEGNETLIDYSATKGA  201 (290)
T ss_pred             CEEEECCcccCCCCCcccCCHHH-HHHHHhhhhHHHHHHHHHHHHHHhh---CCeEEEEecccccCCCCCcchhHHHHHH
Confidence            999999997643 4566777787 9999999999999999999999854   4799999999988888888999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      +++++++++.++.++||++++|+||+++|++..... .++....+....|++++.+++|+|++++||+++..
T Consensus       202 ~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~  272 (290)
T PRK06701        202 IHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF-DEEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDS  272 (290)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc-CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999999999865432 12222334456789999999999999999999853

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2e-34  Score=214.88  Aligned_cols=180  Identities=23%  Similarity=0.297  Sum_probs=163.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVL   85 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~l   85 (238)
                      .+..+++||||++|||+++|++|.+.|.+|++++|+++++++..++.+.+....||+.|.++++++++.+    ..++++
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl   82 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL   82 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence            3567899999999999999999999999999999999999999999999999999999999988877654    679999


Q ss_pred             EEccCCCCCCCCCC--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         86 INNAAVARFDRFLD--IDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        86 i~~ag~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      |||||+.....+..  ...++ .++-+++|+.+++.+++.++|++.++. .+.||++||..+..|....+.||++|+|+.
T Consensus        83 iNNAGIqr~~dlt~~e~~~~~-~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLafvPm~~~PvYcaTKAaiH  160 (245)
T COG3967          83 INNAGIQRNEDLTGAEDLLDD-AEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAFVPMASTPVYCATKAAIH  160 (245)
T ss_pred             eecccccchhhccCCcchhhH-HHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEeccccccCcccccccchhhHHHHH
Confidence            99999986544432  22344 677889999999999999999999987 799999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecC
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQ  191 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~  191 (238)
                      +++.+|+.+++..+|.|..+.|..|+|+
T Consensus       161 syt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         161 SYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHhhhcceEEEEecCCceecC
Confidence            9999999999999999999999999997

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=1.2e-34  Score=239.86  Aligned_cols=216  Identities=15%  Similarity=0.140  Sum_probs=171.9

Q ss_pred             CCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHhc----CCccEEE
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSKV----GPVDVLI   86 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~----g~id~li   86 (238)
                      +||||++|||.+++++|+++| ++|++++|+.+..+++.++.    ..+.++++|+++.++++++++++    +++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            589999999999999999999 99999999988777665543    24778899999999998888654    7899999


Q ss_pred             EccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CceEEEEcccccccc----------------
Q psy14567         87 NNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI-QGSIVNVSSIAGKTA----------------  148 (238)
Q Consensus        87 ~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~----------------  148 (238)
                      ||||+... .+..+.+.++ |++++++|+.+++.+++.++|.|.+++. +|+||++||..+..+                
T Consensus        81 nnAG~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADG-FELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            99998643 2455667777 9999999999999999999999987541 479999999876421                


Q ss_pred             -------------------CCCCchhhHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCCce-ecCcccCCCCCCCccCCcc
Q psy14567        149 -------------------LEGHTIYSASKAALDSITRTMALELGP-YNIRVNSVQPTVV-MTQMGRTGWSDPAKAGPML  207 (238)
Q Consensus       149 -------------------~~~~~~y~~sK~al~~l~~~l~~~~~~-~~i~v~~i~PG~v-~t~~~~~~~~~~~~~~~~~  207 (238)
                                         ..+..+|++||+|+..+++.++.++.+ .||++|+|+||+| .|+|...............
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~  239 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPF  239 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHH
Confidence                               123467999999988889999999975 6999999999999 7888654211100001112


Q ss_pred             cCCCCCCcCCCCCcccccccccccc
Q psy14567        208 AKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       208 ~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ...+.+++.+|++.|+.+++++++.
T Consensus       240 ~~~~~~~~~~pe~~a~~~~~l~~~~  264 (308)
T PLN00015        240 QKYITKGYVSEEEAGKRLAQVVSDP  264 (308)
T ss_pred             HHHHhcccccHHHhhhhhhhhcccc
Confidence            2345678899999999999999874

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-34  Score=235.00  Aligned_cols=220  Identities=21%  Similarity=0.285  Sum_probs=184.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHhc----CCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV----GPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~----g~id~l   85 (238)
                      ..++++||||+||||++++++|+++|++|++++|+.++++.+.+..+ ++..+.+|++|++++.++++++    +++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            35678999999999999999999999999999999988877766543 5778899999999998877654    789999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||.....+..+.+.++ |++++++|+.+++.++++++|.+++++ .++||++||..+..+.++...|+++|++++++
T Consensus        83 v~~ag~~~~~~~~~~~~~~-~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~  160 (277)
T PRK06180         83 VNNAGYGHEGAIEESPLAE-MRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITMPGIGYYCGSKFALEGI  160 (277)
T ss_pred             EECCCccCCcccccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCCCCcchhHHHHHHHHHH
Confidence            9999988767777778887 999999999999999999999998776 68999999999988888999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-----CCccC------CcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-----PAKAG------PMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-----~~~~~------~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++.++.+.|++++.|+||.++|++.......     ++...      ......+..++.+|+|+|+++.+++.+.
T Consensus       161 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        161 SESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            9999999999999999999999999875432111     11000      0111234567789999999999998764

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=235.96  Aligned_cols=219  Identities=22%  Similarity=0.285  Sum_probs=184.6

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      .++++||||+|+||.+++++|+++|++|++++|+.+..++..+..      .++.++++|+++++++.+++++    +++
T Consensus         7 ~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (276)
T PRK05875          7 DRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGR   86 (276)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467899999999999999999999999999999987766554432      3578889999999998887765    478


Q ss_pred             ccEEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         82 VDVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        82 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      +|++|||+|.... .+..+.+.++ +...+++|+.+++.+++++.+.+.+++ .++|+++||..+..+.++..+|+++|+
T Consensus        87 ~d~li~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sK~  164 (276)
T PRK05875         87 LHGVVHCAGGSETIGPITQIDSDA-WRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVGISSIAASNTHRWFGAYGVTKS  164 (276)
T ss_pred             CCEEEECCCcccCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcCCCCCCcchHHHHH
Confidence            9999999997633 4556677777 999999999999999999999998765 689999999998888788899999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++.++.++...+|+++.|.||+++|++.......+..........|++|+++++|+++++.||+++.
T Consensus       165 a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  236 (276)
T PRK05875        165 AVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDA  236 (276)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCch
Confidence            999999999999999999999999999999987543322222223345678899999999999999999874

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=235.89  Aligned_cols=216  Identities=23%  Similarity=0.288  Sum_probs=182.0

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLIN   87 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~li~   87 (238)
                      .++++||||+||||++++++|+++|++|++++|+.++.+.    ..++.++++|++|+++++++++.+    |++|++||
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----IPGVELLELDVTDDASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            4578999999999999999999999999999999766533    236789999999999998888654    88999999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHH
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITR  167 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~  167 (238)
                      |||.....+..+.+.++ +++++++|+.+++.+++.++|.|.+++ .++||++||..+..+.+....|+++|++++++++
T Consensus        80 ~ag~~~~~~~~~~~~~~-~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  157 (270)
T PRK06179         80 NAGVGLAGAAEESSIAQ-AQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPAPYMALYAASKHAVEGYSE  157 (270)
T ss_pred             CCCCCCCcCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCCCCccHHHHHHHHHHHHHH
Confidence            99998777777778887 999999999999999999999998876 6899999999998888888999999999999999


Q ss_pred             HHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCc---------ccCCCCCCcCCCCCccccccccccccc
Q psy14567        168 TMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPM---------LAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       168 ~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~---------~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      .++.++++.||+++.|+||+++|++..............         ....++.+..+|+++|+.++.++++..
T Consensus       158 ~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~~  232 (270)
T PRK06179        158 SLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGPW  232 (270)
T ss_pred             HHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCCC
Confidence            999999999999999999999999876432211111000         001245667899999999999988753

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=3.4e-34  Score=237.85  Aligned_cols=206  Identities=22%  Similarity=0.284  Sum_probs=168.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----C--CceEEEeecCC--HHHHHHHHHhcCC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----P--NVQTVQVDLQD--WARTRAAVSKVGP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~--~~~v~~~~~~~g~   81 (238)
                      +..++++|||||+|||+++|++|+++|++|++++|++++++++.++.    +  ++..+.+|+++  .+.++++.+.+++
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~  130 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG  130 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence            45689999999999999999999999999999999998877665432    2  46778999985  4556666666654


Q ss_pred             --ccEEEEccCCCCC--CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-c-CCCCchh
Q psy14567         82 --VDVLINNAAVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-A-LEGHTIY  155 (238)
Q Consensus        82 --id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~-~~~~~~y  155 (238)
                        +|++|||||+...  .++.+.+.++ +++++++|+.+++.+++.++|.|.+++ .|+||++||..+.. + .+....|
T Consensus       131 ~didilVnnAG~~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~p~~~~Y  208 (320)
T PLN02780        131 LDVGVLINNVGVSYPYARFFHEVDEEL-LKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPSDPLYAVY  208 (320)
T ss_pred             CCccEEEEecCcCCCCCcccccCCHHH-HHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCCccchHH
Confidence              6699999998643  3566777777 999999999999999999999998876 78999999998864 3 4778999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s  230 (238)
                      ++||+++++++++++.|++++||+|++|+||+++|+|....  ...          . ...+|+++|+.++..+.
T Consensus       209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~--~~~----------~-~~~~p~~~A~~~~~~~~  270 (320)
T PLN02780        209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR--RSS----------F-LVPSSDGYARAALRWVG  270 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc--CCC----------C-CCCCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999986421  000          0 03477888877766654

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=232.58  Aligned_cols=217  Identities=24%  Similarity=0.288  Sum_probs=182.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH-hHHH----HHhhCCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA-NLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~----~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||+||||++++++|+++|++|+++.|+.+ ..++    +.+...++.++++|+++++++++++++    +++
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3467899999999999999999999999988776543 2333    333334688899999999999888765    478


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||.....++.+.+.++ |+.++++|+.+++.++++++|.+.+   .++++++||..+..+.++...|+.+|++
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~~~~~~~~Y~~sK~a  159 (245)
T PRK12937         84 IDVLVNNAGVMPLGTIADFDLED-FDRTIATNLRGAFVVLREAARHLGQ---GGRIINLSTSVIALPLPGYGPYAASKAA  159 (245)
T ss_pred             CCEEEECCCCCCCCChhhCCHHH-HHHHHhhhchHHHHHHHHHHHHhcc---CcEEEEEeeccccCCCCCCchhHHHHHH
Confidence            99999999987666667777777 9999999999999999999999854   4799999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++.++++++.++.+.||+++.|+||+++|+|..... .++....+....|+++..+++|+++.+.||+++.
T Consensus       160 ~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  229 (245)
T PRK12937        160 VEGLVHVLANELRGRGITVNAVAPGPVATELFFNGK-SAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPD  229 (245)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccC-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999854321 2233344556779999999999999999999874

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-34  Score=234.08  Aligned_cols=216  Identities=21%  Similarity=0.231  Sum_probs=180.0

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-----CCccEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-----GPVDVLI   86 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-----g~id~li   86 (238)
                      .++++||||+||||++++++|++.|++|++++|+.+.++++...  .+.++.+|++|+++++++++++     +++|++|
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAE--GLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC--CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            35789999999999999999999999999999999888777653  5778999999999998888764     6899999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||+....++.+.+.++ ++.++++|+.+++.+++.++|.+.+++ .|+||++||..+..+.++...|++||+++++++
T Consensus        82 ~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~  159 (277)
T PRK05993         82 NNGAYGQPGAVEDLPTEA-LRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVPMKYRGAYNASKFAIEGLS  159 (277)
T ss_pred             ECCCcCCCCCcccCCHHH-HHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCCCCccchHHHHHHHHHHHH
Confidence            999988777777888887 999999999999999999999998876 689999999999888888999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCC-------CCC-ccC--------Cccc-CCCCCCcCCCCCccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-------DPA-KAG--------PMLA-KTPLGRFAGKLKPKPWNRWLL  229 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-------~~~-~~~--------~~~~-~~~~~r~~~~~~ia~~~~~l~  229 (238)
                      ++++.|++++||+++.|+||+++|++......       .+. ...        .... ..+.....+|+++|+.++..+
T Consensus       160 ~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~a~  239 (277)
T PRK05993        160 LTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLHAL  239 (277)
T ss_pred             HHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHH
Confidence            99999999999999999999999998653210       000 000        0000 112223458999999988877


Q ss_pred             cc
Q psy14567        230 PS  231 (238)
Q Consensus       230 s~  231 (238)
                      .+
T Consensus       240 ~~  241 (277)
T PRK05993        240 TA  241 (277)
T ss_pred             cC
Confidence            55

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.1e-34  Score=233.02  Aligned_cols=219  Identities=23%  Similarity=0.301  Sum_probs=187.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      .++++||||+|+||++++++|+++|++|++++|+.+..+++.+.    ..++.++++|++++++++++++.    ++++|
T Consensus         3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d   82 (250)
T TIGR03206         3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVD   82 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46789999999999999999999999999999998876655433    34688899999999999887754    47899


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||+|.....++.+.+.++ ++..+++|+.+++.+++++.+.|.+++ .++++++||..+..+.++...|+.+|++++
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~  160 (250)
T TIGR03206        83 VLVNNAGWDKFGPFTKTEPPL-WERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGSSGEAVYAACKGGLV  160 (250)
T ss_pred             EEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCCCCCchHHHHHHHHH
Confidence            999999987666667777777 899999999999999999999998766 689999999999888888999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC----CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS----DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .++++++.++.+.||+++.++||+++|++......    +.+....+....|.+++++++|+|+++.|++++.
T Consensus       161 ~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  233 (250)
T TIGR03206       161 AFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDD  233 (250)
T ss_pred             HHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcc
Confidence            99999999998889999999999999998654321    1122234456678999999999999999999874

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-34  Score=234.40  Aligned_cols=216  Identities=22%  Similarity=0.237  Sum_probs=178.4

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CC-ceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PN-VQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      +++||||+||||++++++|+++|++|++++|+.+..++..++.    .. ..++++|+++++++++++++    ++++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            5789999999999999999999999999999987766554332    22 45578999999998887765    478999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||+|.....+..+.+.++ ++..+++|+.+++.++++++|.|.+++..++||++||..+..+.++...|+++|+++++
T Consensus        82 lv~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~  160 (272)
T PRK07832         82 VMNIAGISAWGTVDRLTHEQ-WRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRG  160 (272)
T ss_pred             EEECCCCCCCCccccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHH
Confidence            99999987767777888888 99999999999999999999999775435899999999888888888999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC-----CCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-----DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++++++.++.+.||+++.|+||.++|++..+...     .++....... ...++..+|+|+|+.+++++++
T Consensus       161 ~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vA~~~~~~~~~  231 (272)
T PRK07832        161 LSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD-RFRGHAVTPEKAAEKILAGVEK  231 (272)
T ss_pred             HHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH-hcccCCCCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999998654210     0110111111 1346778999999999999875

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-34  Score=232.40  Aligned_cols=219  Identities=31%  Similarity=0.419  Sum_probs=186.9

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      .++++||||+|+||.+++++|+++|++|++++|+.+..+++....   .++.++++|+++++++++++++    ++++|+
T Consensus         5 ~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   84 (251)
T PRK07231          5 GKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDI   84 (251)
T ss_pred             CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            457899999999999999999999999999999998776655443   3477899999999999888754    478999


Q ss_pred             EEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         85 LINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        85 li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      +||++|.... .++.+.+.++ ++..+++|+.+++.+++.+++.+.+++ .+++|++||..+..+.++...|+.+|++++
T Consensus        85 vi~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~  162 (251)
T PRK07231         85 LVNNAGTTHRNGPLLDVDEAE-FDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRPRPGLGWYNASKGAVI  162 (251)
T ss_pred             EEECCCCCCCCCChhhCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCCCCCchHHHHHHHHHH
Confidence            9999998543 4455667777 999999999999999999999998766 689999999999888889999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC--CCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD--PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+++.++.+++++||+++.++||+++|++.......  ++....+....|.+++.+|+|+|+++.+|+++.
T Consensus       163 ~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  233 (251)
T PRK07231        163 TLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDE  233 (251)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999987653321  122334556678899999999999999999864

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-34  Score=231.82  Aligned_cols=219  Identities=22%  Similarity=0.236  Sum_probs=187.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      +.++++||||+||||+++++.|++.|++|++++|++++.++..+.    ..++.++++|++++++++++++++    +++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            346788999999999999999999999999999998876655433    346888999999999998887654    789


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||+|.....+..+.+.++ ++..++.|+.+++.+.+++.|.+.+++ .|++|++||..+..+.+....|+++|+++
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~y~~sK~~~  163 (250)
T PRK12939         86 DGLVNNAGITNSKSATELDIDT-WDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNLASDTALWGAPKLGAYVASKGAV  163 (250)
T ss_pred             CEEEECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEECchhhccCCCCcchHHHHHHHH
Confidence            9999999988777777777787 999999999999999999999998766 68999999999888888889999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++.++.++++.+|+++.|+||+++|++.+.... ...........|.+++.+++|+|+++.++++..
T Consensus       164 ~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  232 (250)
T PRK12939        164 IGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-DERHAYYLKGRALERLQVPDDVAGAVLFLLSDA  232 (250)
T ss_pred             HHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999998754321 123333445678899999999999999999763

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-34  Score=231.45  Aligned_cols=217  Identities=21%  Similarity=0.222  Sum_probs=169.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC----hHhHHHHHh----hCCCceEEEeecCCHHHHHHHHHh----
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT----QANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSK----   78 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~----   78 (238)
                      +.++++||||+||||.++|++|++.|++|+++.++    .+..+++.+    ...++.++++|+++++++++++++    
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            34678999999999999999999999997666543    233333322    223678899999999999888765    


Q ss_pred             cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHH
Q psy14567         79 VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      ++++|++|||||.....++.+.+.++ +++.+++|+.+++.+++++.|.+.+   .+++++++|.......+....|+++
T Consensus        87 ~~~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~~~~~~~~~~~~---~~~iv~~~ss~~~~~~~~~~~Y~~s  162 (257)
T PRK12744         87 FGRPDIAINTVGKVLKKPIVEISEAE-YDEMFAVNSKSAFFFIKEAGRHLND---NGKIVTLVTSLLGAFTPFYSAYAGS  162 (257)
T ss_pred             hCCCCEEEECCcccCCCCcccCCHHH-HHHHHhhhhhHHHHHHHHHHHhhcc---CCCEEEEecchhcccCCCcccchhh
Confidence            47899999999987666777777887 9999999999999999999999864   3677776433333445677899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC--CccCCcccCCCCC--CcCCCCCccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP--AKAGPMLAKTPLG--RFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~--r~~~~~~ia~~~~~l~s~  231 (238)
                      |+++++++++++.++.++||+||.++||+++|++........  ..........|+.  |+.+|+|+++++.||+++
T Consensus       163 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  239 (257)
T PRK12744        163 KAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD  239 (257)
T ss_pred             HHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcc
Confidence            999999999999999999999999999999999764321111  1111122233444  889999999999999995

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.7e-34  Score=231.84  Aligned_cols=215  Identities=21%  Similarity=0.283  Sum_probs=179.3

Q ss_pred             CcCCCCCCCCCC--chHHHHHHHHhhCCCEEEEecCC-----------hHhH----HHHHhhCCCceEEEeecCCHHHHH
Q psy14567         11 RTNTKGGDYPKP--GIGRCIVEKLSQHEAIIIALSKT-----------QANL----DSLKQAFPNVQTVQVDLQDWARTR   73 (238)
Q Consensus        11 ~~~v~~itG~s~--gIG~~ia~~l~~~G~~V~~~~r~-----------~~~~----~~~~~~~~~~~~~~~D~~~~~~v~   73 (238)
                      +.++++||||++  |||.+++++|++.|++|++++|+           ....    +++.....++.++++|+++++++.
T Consensus         4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   83 (256)
T PRK12748          4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPN   83 (256)
T ss_pred             CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            346789999994  99999999999999999999987           2221    122222335889999999999998


Q ss_pred             HHHHhc----CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC
Q psy14567         74 AAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL  149 (238)
Q Consensus        74 ~~~~~~----g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  149 (238)
                      ++++++    +++|++|||||+....+..+.+.++ ++..+++|+.+++.+.+++.+.|.++. .+++|++||..+..+.
T Consensus        84 ~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~  161 (256)
T PRK12748         84 RVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQ-LDKHYAVNVRATMLLSSAFAKQYDGKA-GGRIINLTSGQSLGPM  161 (256)
T ss_pred             HHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHhhhcC-CeEEEEECCccccCCC
Confidence            877654    8899999999987667777778887 999999999999999999999987655 6899999999888888


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccc
Q psy14567        150 EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLL  229 (238)
Q Consensus       150 ~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~  229 (238)
                      ++...|+++|+++++++++++.++.++||+++.|+||+++|++...     +.........|.+|+.+|+|+|+.+.||+
T Consensus       162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  236 (256)
T PRK12748        162 PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE-----ELKHHLVPKFPQGRVGEPVDAARLIAFLV  236 (256)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh-----hHHHhhhccCCCCCCcCHHHHHHHHHHHh
Confidence            8889999999999999999999999999999999999999987532     12222334557788999999999999999


Q ss_pred             ccc
Q psy14567        230 PSV  232 (238)
Q Consensus       230 s~~  232 (238)
                      ++.
T Consensus       237 ~~~  239 (256)
T PRK12748        237 SEE  239 (256)
T ss_pred             Ccc
Confidence            874

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-34  Score=227.46  Aligned_cols=212  Identities=17%  Similarity=0.174  Sum_probs=174.8

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeecCC--HHHHHHHHH---
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQD--WARTRAAVS---   77 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~--~~~v~~~~~---   77 (238)
                      ++.+.++++||||+||||.+++++|++.|++|++++|+.++.+++.++.     +....+++|+++  .+++.++++   
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence            3445578999999999999999999999999999999998776654432     246778999975  455655554   


Q ss_pred             -hc-CCccEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCch
Q psy14567         78 -KV-GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTI  154 (238)
Q Consensus        78 -~~-g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  154 (238)
                       ++ +++|++|||||... ..++.+.+.++ |++.+++|+.+++.++++++|.+.+.+ .++++++||..+..+.++..+
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~  159 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALSPLDFQTVAE-WVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGETPKAYWGG  159 (239)
T ss_pred             HHhCCCCCEEEEeccccccCCCccccCHHH-HHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccccCCCCccc
Confidence             34 78999999999753 34667777787 999999999999999999999998765 689999999998888888899


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCC-CeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPY-NIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~-~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      |++||++++.++++++.++.++ +|+|+.|.||+++|++..+......          ..+..+++|+++.+.|++++
T Consensus       160 Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        160 FGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA----------KSERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             hHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC----------ccccCCHHHHHHHHHHHhCc
Confidence            9999999999999999999877 6999999999999998654321111          12346999999999999985

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-34  Score=230.80  Aligned_cols=218  Identities=23%  Similarity=0.298  Sum_probs=182.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEe-cCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc------
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIAL-SKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV------   79 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~------   79 (238)
                      +.++++||||+||||.++|++|+++|++|++. .|+.+..++..+.    ...+.++++|++|++++.++++++      
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            34678999999999999999999999998774 7887666554433    235778999999999998888764      


Q ss_pred             ----CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchh
Q psy14567         80 ----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIY  155 (238)
Q Consensus        80 ----g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y  155 (238)
                          +++|++|||||........+.+.+. |+.++++|+.+++.+++.+++.+.+   .+++|++||..+..+.++...|
T Consensus        85 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~v~~sS~~~~~~~~~~~~Y  160 (254)
T PRK12746         85 RVGTSEIDILVNNAGIGTQGTIENTTEEI-FDEIMAVNIKAPFFLIQQTLPLLRA---EGRVINISSAEVRLGFTGSIAY  160 (254)
T ss_pred             ccCCCCccEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECCHHhcCCCCCCcch
Confidence                4699999999987666667777777 9999999999999999999999854   3699999999988888889999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+++++++++++.++.++|++++.++||+++|++.......++.........+.++..+++|+++++.+++++.
T Consensus       161 ~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  237 (254)
T PRK12746        161 GLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSD  237 (254)
T ss_pred             HhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999987553333333333334567788999999999999998864

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-34  Score=230.83  Aligned_cols=218  Identities=27%  Similarity=0.350  Sum_probs=176.8

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEe-cCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIAL-SKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      ++++||||++|||.++++.|+++|++|+++ .|+.+..+++..+    ..++.+++||+++++++++++++    ++++|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            578999999999999999999999998776 4665555443322    24688999999999999887765    47899


Q ss_pred             EEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCceEEEEccccccccCCC-CchhhHHH
Q psy14567         84 VLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK--IQGSIVNVSSIAGKTALEG-HTIYSASK  159 (238)
Q Consensus        84 ~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~-~~~y~~sK  159 (238)
                      ++|||||.... .+..+.+.++ ++.++++|+.+++.+++++++.+..++  ..+++|++||..+..+.+. ...|+++|
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06947         83 ALVNNAGIVAPSMPLADMDAAR-LRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK  161 (248)
T ss_pred             EEEECCccCCCCCChhhCCHHH-HHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence            99999998744 3456667777 999999999999999999999886543  1468999999988776553 56899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++++++.++.+.||+++.|+||+++|++.... ..++.........|++|..+++|+++.++|++++.
T Consensus       162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~  233 (248)
T PRK06947        162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG-GQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDA  233 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc-CCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999986432 11222223345668889999999999999999875

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-34  Score=233.35  Aligned_cols=216  Identities=19%  Similarity=0.177  Sum_probs=179.2

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      +++||||+||||++++++|+++|++|++++|+.+..+++.+.    ..++.++++|+++++++.++++.    ++++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            578999999999999999999999999999998876654433    34678899999999999887764    4789999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||+|......+.+.+.++ +++++++|+.+++.+++.++|.+.+++ .++||++||..+..+.++...|+++|++++++
T Consensus        82 I~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~  159 (270)
T PRK05650         82 VNNAGVASGGFFEELSLED-WDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQGPAMSSYNVAKAGVVAL  159 (270)
T ss_pred             EECCCCCCCCCcccCCHHH-HHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence            9999998777777788887 999999999999999999999998766 68999999999998989999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +++++.++.+.||+++.|+||+++|++....................+...+++|+|+.++..+.+
T Consensus       160 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        160 SETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAK  225 (270)
T ss_pred             HHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhC
Confidence            999999999999999999999999998754322211111111111123346899999988887766

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.6e-34  Score=230.45  Aligned_cols=214  Identities=26%  Similarity=0.227  Sum_probs=181.5

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC--CceEEEeecCCHHHHHHHHHh-----cCCccE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP--NVQTVQVDLQDWARTRAAVSK-----VGPVDV   84 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~-----~g~id~   84 (238)
                      +++++||||+||||++++++|+++|++|++++|+.+.++++.+..+  ++.++++|+++.+++.++++.     .+++|+
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            3678999999999999999999999999999999998888766543  688999999999999887764     478999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||||......+.+.+.++ +++.+++|+.+++.+++++.+.|.+++ .++||++||..+..+.++...|+.||+++++
T Consensus        81 vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  158 (260)
T PRK08267         81 LFNNAGILRGGPFEDIPLEA-HDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQPGLAVYSATKFAVRG  158 (260)
T ss_pred             EEECCCCCCCCccccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCCCCchhhHHHHHHHHH
Confidence            99999998777777777787 999999999999999999999998766 6899999999988888889999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++++++.++.++||++++|.||+++|++.....  .+.......  ..+...+|+++|+.+++++.+
T Consensus       159 ~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~--~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        159 LTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS--NEVDAGSTK--RLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHhcccCcEEEEEecCCcCCccccccc--chhhhhhHh--hccCCCCHHHHHHHHHHHHhC
Confidence            999999999999999999999999999865411  111111111  123346889999999999854

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=4.1e-34  Score=230.58  Aligned_cols=214  Identities=22%  Similarity=0.227  Sum_probs=173.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      +.++++||||+||||+++|+.|+++|++|++++|+.++++++.+..      ..+.++++|++|++++.+++++    ++
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3568899999999999999999999999999999988776654433      1355679999999999888765    47


Q ss_pred             CccEEEEccCCCC---CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC--------
Q psy14567         81 PVDVLINNAAVAR---FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL--------  149 (238)
Q Consensus        81 ~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  149 (238)
                      ++|++|||||...   ..++.+.+.++ +...+++|+.+++.++++++|.|.+++ .++||++||..+..+.        
T Consensus        83 ~id~vi~~A~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~  160 (256)
T PRK09186         83 KIDGAVNCAYPRNKDYGKKFFDVSLDD-FNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFEIYEGT  160 (256)
T ss_pred             CccEEEECCccccccccCccccCCHHH-HHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccchhcccc
Confidence            8999999997542   24566777777 999999999999999999999998776 6799999998764321        


Q ss_pred             --CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccc
Q psy14567        150 --EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRW  227 (238)
Q Consensus       150 --~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~  227 (238)
                        .....|+++|+++++++++++.++.++||++|.|+||.+.++...      .....+....+.+++.+|+|+|+.++|
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~------~~~~~~~~~~~~~~~~~~~dva~~~~~  234 (256)
T PRK09186        161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE------AFLNAYKKCCNGKGMLDPDDICGTLVF  234 (256)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH------HHHHHHHhcCCccCCCCHHHhhhhHhh
Confidence              122479999999999999999999999999999999998876421      111222233566788999999999999


Q ss_pred             ccccc
Q psy14567        228 LLPSV  232 (238)
Q Consensus       228 l~s~~  232 (238)
                      ++++.
T Consensus       235 l~~~~  239 (256)
T PRK09186        235 LLSDQ  239 (256)
T ss_pred             eeccc
Confidence            99875

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3.4e-34  Score=229.46  Aligned_cols=217  Identities=25%  Similarity=0.353  Sum_probs=183.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH-hHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA-NLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      ++++||||+||||.++|++|+++|++|++++|+.. ..++....    ..++.++++|+++++++.+++++    ++++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999853 22222222    23478899999999998887765    47899


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||+|.....++.+.+.++ |+..+++|+.+++.++++++|.+.+.+ .+++|++||..+..+.++...|+++|++++
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~  160 (245)
T PRK12824         83 ILVNNAGITRDSVFKRMSHQE-WNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQFGQTNYSAAKAGMI  160 (245)
T ss_pred             EEEECCCCCCCCccccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCCCCChHHHHHHHHHH
Confidence            999999988766777778887 999999999999999999999998766 689999999999888888999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      ++++.++.++.++||+++.+.||.++|++.+..  .+.....+....|+++..+++|+++++.||+++..
T Consensus       161 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  228 (245)
T PRK12824        161 GFTKALASEGARYGITVNCIAPGYIATPMVEQM--GPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAA  228 (245)
T ss_pred             HHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999999986542  12223334456688899999999999999998753

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-34  Score=228.46  Aligned_cols=209  Identities=22%  Similarity=0.243  Sum_probs=176.9

Q ss_pred             CCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      +||||++|||++++++|+++|++|++++|+.++.+++.+..   .++.++.+|+++++++.+++++++++|++|||+|..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            58999999999999999999999999999988776655433   457889999999999999999999999999999988


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHH
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALE  172 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~  172 (238)
                      ...++.+.+.++ +++++++|+.+++.+++  .+.+.  + .++||++||..+..+.++...|+.+|+++++++++++.+
T Consensus        81 ~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~--~~~~~--~-~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  154 (230)
T PRK07041         81 PGGPVRALPLAA-AQAAMDSKFWGAYRVAR--AARIA--P-GGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALE  154 (230)
T ss_pred             CCCChhhCCHHH-HHHHHHHHHHHHHHHHh--hhhhc--C-CeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence            766677777787 99999999999999999  34442  2 589999999999888888999999999999999999999


Q ss_pred             hCCCCeEEEEEeCCceecCcccCCCCC--CCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        173 LGPYNIRVNSVQPTVVMTQMGRTGWSD--PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       173 ~~~~~i~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.+  ||+|.++||+++|++.......  ...........|++|+.+|+|+|+++.||+++.
T Consensus       155 ~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  214 (230)
T PRK07041        155 LAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANG  214 (230)
T ss_pred             hhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCC
Confidence            976  9999999999999986432111  112223345568889999999999999999864

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-34  Score=229.43  Aligned_cols=205  Identities=22%  Similarity=0.264  Sum_probs=172.8

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC---CceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP---NVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      ++++||||+||||.+++++|++.|++|++++|+.+.++++.++.+   ++.++++|+++++++.+++++    .+++|++
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~l   82 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDVV   82 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            578999999999999999999999999999999988877766543   578899999999999887755    4789999


Q ss_pred             EEccCCCCCCCCCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         86 INNAAVARFDRFLD-IDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        86 i~~ag~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      |||+|........+ .+.++ ++.++++|+.+++.+++.++|.|.+++ .++||++||..+..+.+....|+++|+++++
T Consensus        83 v~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  160 (257)
T PRK07024         83 IANAGISVGTLTEEREDLAV-FREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGLPGAGAYSASKAAAIK  160 (257)
T ss_pred             EECCCcCCCccccccCCHHH-HHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence            99999865433333 55666 999999999999999999999998776 6899999999999888889999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++++++.|++++||++++|+||+++|++.....            .+.....+|+++++.++..+.+
T Consensus       161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~~~~~l~~  215 (257)
T PRK07024        161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP------------YPMPFLMDADRFAARAARAIAR  215 (257)
T ss_pred             HHHHHHHHhhccCcEEEEEecCCCcCchhhcCC------------CCCCCccCHHHHHHHHHHHHhC
Confidence            999999999999999999999999999854310            0111235788888777777665

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1.2e-33  Score=227.03  Aligned_cols=215  Identities=22%  Similarity=0.330  Sum_probs=176.4

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhc----CCccEEEEc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV----GPVDVLINN   88 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~----g~id~li~~   88 (238)
                      +++||||+||||.+++++|+++|++|++++|++++++++.+.. .++.++.+|++++++++++++++    +++|++||+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4689999999999999999999999999999998887776654 35788999999999998877654    789999999


Q ss_pred             cCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHH
Q psy14567         89 AAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITR  167 (238)
Q Consensus        89 ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~  167 (238)
                      +|... ..+..+.+.++ +++++++|+.+++.+++.++|.+.+++ .+++|++||..+..+.++...|+.+|++++++++
T Consensus        82 ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~  159 (248)
T PRK10538         82 AGLALGLEPAHKASVED-WETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSL  159 (248)
T ss_pred             CCccCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCCCCCCCchhHHHHHHHHHHHH
Confidence            99753 34556667777 999999999999999999999998766 6899999999988888888999999999999999


Q ss_pred             HHHHHhCCCCeEEEEEeCCceecCcccCC-CC-CCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        168 TMALELGPYNIRVNSVQPTVVMTQMGRTG-WS-DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       168 ~l~~~~~~~~i~v~~i~PG~v~t~~~~~~-~~-~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      .++.++.++||++|.|.||++.|++.... .. .+.......   ......+|+|+|++++|++++..
T Consensus       160 ~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        160 NLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTY---QNTVALTPEDVSEAVWWVATLPA  224 (248)
T ss_pred             HHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhc---cccCCCCHHHHHHHHHHHhcCCC
Confidence            99999999999999999999985543221 11 111111111   11234699999999999998653

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=4.3e-34  Score=228.49  Aligned_cols=217  Identities=26%  Similarity=0.365  Sum_probs=183.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHHh----hCCCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      ++++||||+||||.+++++|+++|++|+++.| +++..++...    ...++.++.+|+++++++++++++    .+++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            46789999999999999999999999998888 5554444322    234678899999999999887765    47899


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||+|......+.+.+.++ ++..+++|+.+++.++++++|.+.+.+ .++|+++||..+..+.++...|+++|++++
T Consensus        81 ~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~~sk~a~~  158 (242)
T TIGR01829        81 VLVNNAGITRDATFKKMTYEQ-WSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQFGQTNYSAAKAGMI  158 (242)
T ss_pred             EEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCCCcchhHHHHHHHH
Confidence            999999987766667777777 999999999999999999999998766 689999999998888888999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      .++++++.++.+.||+++.+.||+++|++....  .++....+....|.+++.+|+|+++.+.||+++..
T Consensus       159 ~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  226 (242)
T TIGR01829       159 GFTKALAQEGATKGVTVNTISPGYIATDMVMAM--REDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEA  226 (242)
T ss_pred             HHHHHHHHHhhhhCeEEEEEeeCCCcCcccccc--chHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            999999999999999999999999999986542  22333334456788999999999999999998854

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.6e-34  Score=234.83  Aligned_cols=215  Identities=21%  Similarity=0.288  Sum_probs=174.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh-HhHHH----HHhhCCCceEEEeecCCHHHHHHHHHh---cCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ-ANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK---VGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~----~~~~~~~~~~~~~D~~~~~~v~~~~~~---~g~i   82 (238)
                      ..++++||||++|||+++|++|+++|++|++.+++. +..++    +.+...++.++++|+++++++++++++   +|++
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i   90 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL   90 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence            456889999999999999999999999999988753 33333    333334678899999999999887754   5899


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------CCceEEEEccccccccCCCCchhh
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK------IQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                      |++|||||+.....+.+.+.++ |+..+++|+.+++.+++++.++|.++.      ..|+||++||..+..+.++...|+
T Consensus        91 D~li~nAG~~~~~~~~~~~~~~-~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  169 (306)
T PRK07792         91 DIVVNNAGITRDRMLFNMSDEE-WDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYG  169 (306)
T ss_pred             CEEEECCCCCCCCCcccCCHHH-HHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchHH
Confidence            9999999998776777788887 999999999999999999999997542      137999999999888888889999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++|++++++++.++.++.++||+||+|+||. .|+|...........  ..   ......+|+++++.+.||+++.
T Consensus       170 asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~~~--~~---~~~~~~~pe~va~~v~~L~s~~  239 (306)
T PRK07792        170 AAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAPDV--EA---GGIDPLSPEHVVPLVQFLASPA  239 (306)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccchh--hh---hccCCCCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999995 888864422111100  00   1112348999999999999873

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-34  Score=229.59  Aligned_cols=221  Identities=27%  Similarity=0.318  Sum_probs=186.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHhc----CCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSKV----GPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~----g~id   83 (238)
                      +.++++||||+|+||.+++++|+++|++|++++|+.+..++..+..   ..+.++++|++|+++++++++++    +++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3568899999999999999999999999999999987766554433   35788999999999998887654    7899


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||+|........+.+.++ ++..+++|+.+++.+++.+++.+++++ .++|+++||..+..+.++...|+.+|++++
T Consensus        84 ~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~  161 (252)
T PRK06138         84 VLVNNAGFGCGGTVVTTDEAD-WDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGGRGRAAYVASKGAIA  161 (252)
T ss_pred             EEEECCCCCCCCCcccCCHHH-HHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCCccHHHHHHHHHH
Confidence            999999987766677777787 999999999999999999999998766 689999999998888888899999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC---CC-CccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS---DP-AKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~---~~-~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      .++++++.+++++|++++.++||++.|++......   .+ ..........|.+++.+++|+++++.+++++..
T Consensus       162 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~  235 (252)
T PRK06138        162 SLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDES  235 (252)
T ss_pred             HHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchh
Confidence            99999999999999999999999999998654321   11 111122234577788999999999999998853

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-34  Score=228.55  Aligned_cols=218  Identities=26%  Similarity=0.326  Sum_probs=177.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEec-CChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALS-KTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      ++++||||+||||.+++++|+++|++|++.. |+++..+++.+.    ...+.++++|++|++++.+++++    ++++|
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLD   82 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999999999988876 444444443322    23577899999999999888764    47899


Q ss_pred             EEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCceEEEEccccccccCCC-CchhhHHH
Q psy14567         84 VLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK--IQGSIVNVSSIAGKTALEG-HTIYSASK  159 (238)
Q Consensus        84 ~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~-~~~y~~sK  159 (238)
                      ++|||||.... .++.+.+.++ |+.++++|+.+++.+++++++.+.++.  .+|+|+++||..+..+.++ ...|+++|
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06123         83 ALVNNAGILEAQMRLEQMDAAR-LTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK  161 (248)
T ss_pred             EEEECCCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence            99999998754 3456667777 999999999999999999999997642  2478999999988777665 36799999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++++++.++.++||+++.|.||.+.|++..... .++.........|++|.++|+|+++.+.|++++.
T Consensus       162 aa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~  233 (248)
T PRK06123        162 GAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDE  233 (248)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999864321 2222233445678999999999999999999864

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=5.4e-34  Score=228.78  Aligned_cols=217  Identities=27%  Similarity=0.365  Sum_probs=181.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHHh----hCCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      +.++++||||+||||.+++++|+++|++|++..+ +.+..+++.+    ...++.++++|+++++++.++++++    ++
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK   84 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4578999999999999999999999999987654 4454444432    2345888999999999998888664    88


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||......+.+.+.++ ++..+++|+.+++.++++++|.+.+++ .+++|++||..+..+.++...|+++|++
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  162 (247)
T PRK12935         85 VDILVNNAGITRDRTFKKLNRED-WERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAGGFGQTNYSAAKAG  162 (247)
T ss_pred             CCEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcCCCCCCcchHHHHHH
Confidence            99999999988766666777777 999999999999999999999998766 6899999999888888888999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +++++++++.++.+.||+++.++||+++|++....  +...........+.+++..|+|+++++.|++++
T Consensus       163 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~  230 (247)
T PRK12935        163 MLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV--PEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD  230 (247)
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc--cHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc
Confidence            99999999999998999999999999999886542  111222233455678899999999999999875

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-34  Score=229.37  Aligned_cols=222  Identities=24%  Similarity=0.260  Sum_probs=184.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCE-EEEecCChHhHHHHHh----hCCCceEEEeecCCHHHHHHHHHhc----C
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAI-IIALSKTQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSKV----G   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~----g   80 (238)
                      .+.++++||||+||||.+++++|++.|++ |++++|+.+..+...+    ....+.++.+|+++++++.++++.+    +
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            34567899999999999999999999998 9999998776554333    2235777899999999998877654    7


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||+|.....++.+.+.++ |+.++++|+.+++.+++++++.+.+++..+++|++||..+..+.++...|+.+|+
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~  162 (260)
T PRK06198         84 RLDALVNAAGLTDRGTILDTSPEL-FDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKG  162 (260)
T ss_pred             CCCEEEECCCcCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHH
Confidence            899999999987766677777777 9999999999999999999999987643589999999998877788899999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCC---C--CCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG---W--SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~---~--~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++++.++...||+++.|+||+++|++....   .  ....+........|.++..+++|+++.+.|++++.
T Consensus       163 a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  239 (260)
T PRK06198        163 ALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDE  239 (260)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChh
Confidence            999999999999999999999999999999974321   0  01112222334568899999999999999998763

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-33  Score=226.99  Aligned_cols=213  Identities=23%  Similarity=0.274  Sum_probs=181.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh---CCCceEEEeecCCHHHHHHHHHhc---CCccE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA---FPNVQTVQVDLQDWARTRAAVSKV---GPVDV   84 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~---g~id~   84 (238)
                      +.++++||||+||||.+++++|+++|++|++++|+.+.++++..+   ..++.++++|++|+++++++++.+   +++|+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            346799999999999999999999999999999999887776554   235788999999999998887654   78999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||||.....++.+.+.++ ++..+++|+.+++.+++.++|++.+++ .++++++||..+..+.++...|+.+|+++.+
T Consensus        84 lv~~ag~~~~~~~~~~~~~~-~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  161 (263)
T PRK09072         84 LINNAGVNHFALLEDQDPEA-IERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGSIGYPGYASYCASKFALRG  161 (263)
T ss_pred             EEECCCCCCccccccCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhCcCCCCccHHHHHHHHHHH
Confidence            99999987766777777787 899999999999999999999998765 5899999999988888889999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++.+++++||+++.++||+++|++......  +..     .....++.+|+|+|+.+.+++.+.
T Consensus       162 ~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~--~~~-----~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        162 FSEALRRELADTGVRVLYLAPRATRTAMNSEAVQ--ALN-----RALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHhcccCcEEEEEecCcccccchhhhcc--ccc-----ccccCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999998643211  111     111236789999999999998774

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-33  Score=227.39  Aligned_cols=220  Identities=20%  Similarity=0.223  Sum_probs=182.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      +.++++||||+|+||++++++|+++|++|++++|+++..++..+.    ..++.++++|++++++++++++++    +++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999999766554443    235778999999999998887654    789


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH-HhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTM-IDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      |++|||+|.....+..+.+.++ ++..+++|+.+++.+++.+++.+ .+.+ .++||++||..+..+.+....|+++|++
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~y~~sk~a  163 (262)
T PRK13394         86 DILVSNAGIQIVNPIENYSFAD-WKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEASPLKSAYVTAKHG  163 (262)
T ss_pred             CEEEECCccCCCCchhhCCHHH-HHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCCCCCCcccHHHHHH
Confidence            9999999987666666667777 89999999999999999999999 5544 6899999999888888888899999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC---------Ccc-CCcccCCCCCCcCCCCCccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP---------AKA-GPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~---------~~~-~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++++++.++.++.+.+|++|.|+||+++|++........         +.. ..+....+.+++.+++|++++++++++.
T Consensus       164 ~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~  243 (262)
T PRK13394        164 LLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSF  243 (262)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCc
Confidence            999999999999989999999999999999754322110         000 1122355678899999999999999986


Q ss_pred             c
Q psy14567        232 V  232 (238)
Q Consensus       232 ~  232 (238)
                      .
T Consensus       244 ~  244 (262)
T PRK13394        244 P  244 (262)
T ss_pred             c
Confidence            3

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-33  Score=227.02  Aligned_cols=179  Identities=26%  Similarity=0.397  Sum_probs=160.9

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLIN   87 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~li~   87 (238)
                      +++++||||+||||++++++|+++|++|++++|+.++.+++.+.  +..++.+|++++++++++++++    +++|++||
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAA--GFTAVQLDVNDGAALARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            36789999999999999999999999999999999887776543  4678899999999998887655    78999999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHH
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITR  167 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~  167 (238)
                      |||.....+..+.+.++ ++..+++|+.+++.++++++|.+.++  .|+||++||..+..+.+....|+++|++++.+++
T Consensus        79 ~ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~  155 (274)
T PRK05693         79 NAGYGAMGPLLDGGVEA-MRRQFETNVFAVVGVTRALFPLLRRS--RGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSD  155 (274)
T ss_pred             CCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHhhc--CCEEEEECCccccCCCCCccHHHHHHHHHHHHHH
Confidence            99987767777778887 99999999999999999999999754  4899999999998888888999999999999999


Q ss_pred             HHHHHhCCCCeEEEEEeCCceecCcccC
Q psy14567        168 TMALELGPYNIRVNSVQPTVVMTQMGRT  195 (238)
Q Consensus       168 ~l~~~~~~~~i~v~~i~PG~v~t~~~~~  195 (238)
                      +++.|+.++||+|+.|+||+++|++.+.
T Consensus       156 ~l~~e~~~~gi~v~~v~pg~v~t~~~~~  183 (274)
T PRK05693        156 ALRLELAPFGVQVMEVQPGAIASQFASN  183 (274)
T ss_pred             HHHHHhhhhCeEEEEEecCccccccccc
Confidence            9999999999999999999999998654

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-33  Score=219.96  Aligned_cols=189  Identities=24%  Similarity=0.309  Sum_probs=165.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      +++||||++|||+++++.|+++ ++|++++|+..             .+++|+++++++++++++++++|++|||||...
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~~   67 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------DVQVDITDPASIRALFEKVGKVDAVVSAAGKVH   67 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------ceEecCCChHHHHHHHHhcCCCCEEEECCCCCC
Confidence            4789999999999999999998 99999999753             368999999999999999999999999999876


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHHh
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL  173 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~  173 (238)
                      ..++.+.+.++ |++.+++|+.+++.+++.+.|+|.+   .++|+++||..+..+.++...|+++|+++++++++++.|+
T Consensus        68 ~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~  143 (199)
T PRK07578         68 FAPLAEMTDED-FNVGLQSKLMGQVNLVLIGQHYLND---GGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALEL  143 (199)
T ss_pred             CCchhhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhc---CCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHHc
Confidence            67777778887 9999999999999999999999964   4799999999998888899999999999999999999999


Q ss_pred             CCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        174 GPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       174 ~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                       ++||++|.|+||+++|++....    +       ..|..+..+|+|+|+.+..++++.
T Consensus       144 -~~gi~v~~i~Pg~v~t~~~~~~----~-------~~~~~~~~~~~~~a~~~~~~~~~~  190 (199)
T PRK07578        144 -PRGIRINVVSPTVLTESLEKYG----P-------FFPGFEPVPAARVALAYVRSVEGA  190 (199)
T ss_pred             -cCCeEEEEEcCCcccCchhhhh----h-------cCCCCCCCCHHHHHHHHHHHhccc
Confidence             8899999999999999874221    0       113344679999999998888764

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-33  Score=226.33  Aligned_cols=206  Identities=20%  Similarity=0.214  Sum_probs=167.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHh-HHHHHhh----CC-CceEEEeecCCHHHHHHHHHhc---C
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQAN-LDSLKQA----FP-NVQTVQVDLQDWARTRAAVSKV---G   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~-~~~~~~~----~~-~~~~~~~D~~~~~~v~~~~~~~---g   80 (238)
                      +.++++||||++|||+++|++|+++| ++|++++|+.+. ++++.++    .. +++++++|++|+++++++++++   +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g   86 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG   86 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence            56689999999999999999999985 899999998775 5443332    22 5889999999999987776544   7


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||+|..........+.++ ..+.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|++||+
T Consensus        87 ~id~li~~ag~~~~~~~~~~~~~~-~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~~~~~~~Y~~sKa  164 (253)
T PRK07904         87 DVDVAIVAFGLLGDAEELWQNQRK-AVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERVRRSNFVYGSTKA  164 (253)
T ss_pred             CCCEEEEeeecCCchhhcccCHHH-HHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCCCCcchHHHHH
Confidence            899999999986432211123333 567899999999999999999998877 689999999988777777889999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++.+|+++++.|+.++||+++.|+||+++|++......           .|  ...+|+|+|+.+...+.+
T Consensus       165 a~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~-----------~~--~~~~~~~~A~~i~~~~~~  222 (253)
T PRK07904        165 GLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE-----------AP--LTVDKEDVAKLAVTAVAK  222 (253)
T ss_pred             HHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC-----------CC--CCCCHHHHHHHHHHHHHc
Confidence            99999999999999999999999999999998653210           01  135889999998888765

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-33  Score=228.74  Aligned_cols=207  Identities=22%  Similarity=0.281  Sum_probs=169.9

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      .++++||||+||||+++|++|+++|++|++++|+.+.++++.++.    ..+.++++|++|++++.+++++    +|++|
T Consensus        40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id  119 (293)
T PRK05866         40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVD  119 (293)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            367899999999999999999999999999999998877665432    3577899999999999888874    58999


Q ss_pred             EEEEccCCCCCCCCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-cCCCCchhhHHHH
Q psy14567         84 VLINNAAVARFDRFLDI--DEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-ALEGHTIYSASKA  160 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~~~y~~sK~  160 (238)
                      ++|||||.....++.+.  +.++ ++..+++|+.+++.++++++|.|.+++ .|+||++||..+.. +.++...|+++|+
T Consensus       120 ~li~~AG~~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~p~~~~Y~asKa  197 (293)
T PRK05866        120 ILINNAGRSIRRPLAESLDRWHD-VERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEASPLFSVYNASKA  197 (293)
T ss_pred             EEEECCCCCCCcchhhccccHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCCCCcchHHHHHH
Confidence            99999998765555443  2355 899999999999999999999998776 68999999976654 3567789999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      |+++++++++.|++++||++++|+||+++|++.......          .+. ...+|+++|+.+...+.+
T Consensus       198 al~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~----------~~~-~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        198 ALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY----------DGL-PALTADEAAEWMVTAART  257 (293)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc----------cCC-CCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999986432100          011 135788888887766654

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-33  Score=227.90  Aligned_cols=219  Identities=23%  Similarity=0.316  Sum_probs=181.0

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHH----hcCC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVS----KVGP   81 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~----~~g~   81 (238)
                      .++++||||+||||.++++.|+++|++|++++|+.+..+++.++.      ..+.++.+|++|++++++ ++    .+++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~   81 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR   81 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence            457899999999999999999999999999999988766654432      257889999999999876 54    4589


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||+|........+.+.++ +++.+++|+.+++.+++.++|.+++.+ .+++|++||..+..+.++...|+.+|++
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~~  159 (280)
T PRK06914         82 IDLLVNNAGYANGGFVEEIPVEE-YRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGFPGLSPYVSSKYA  159 (280)
T ss_pred             eeEEEECCcccccCccccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCCCCCchhHHhHHH
Confidence            99999999988766677777777 999999999999999999999998766 6899999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCcc-----------CCccc--CCCCCCcCCCCCcccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKA-----------GPMLA--KTPLGRFAGKLKPKPWNRWL  228 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~-----------~~~~~--~~~~~r~~~~~~ia~~~~~l  228 (238)
                      +++++++++.++.++||+++.++||+++|++...........           .....  ..+.+++.+|+|+|+++.++
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~  239 (280)
T PRK06914        160 LEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEI  239 (280)
T ss_pred             HHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHH
Confidence            999999999999999999999999999999764321110000           00000  13457789999999999999


Q ss_pred             ccccc
Q psy14567        229 LPSVG  233 (238)
Q Consensus       229 ~s~~~  233 (238)
                      +++..
T Consensus       240 ~~~~~  244 (280)
T PRK06914        240 AESKR  244 (280)
T ss_pred             HcCCC
Confidence            98753

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-33  Score=225.66  Aligned_cols=216  Identities=25%  Similarity=0.314  Sum_probs=179.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      ..++++||||+||||.+++++|++.|++|++++|+.+..+++.+.    ..+..++.+|+++.++++++++++    +++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            346789999999999999999999999999999998766554433    235678899999999998877654    789


Q ss_pred             cEEEEccCCCC---CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         83 DVLINNAAVAR---FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        83 d~li~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      |++|||||+..   ..++.+.+.++ +++.+++|+.+++.++++++|.+.+++ .++||++||..+..   +...|+++|
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~---~~~~Y~~sK  159 (250)
T PRK07774         85 DYLVNNAAIYGGMKLDLLITVPWDY-YKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAWL---YSNFYGLAK  159 (250)
T ss_pred             CEEEECCCCcCCCCCCChhhCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEecccccC---CccccHHHH
Confidence            99999999864   23455666676 999999999999999999999998766 68999999987643   357899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++++++.++.+.||+++.++||.++|++..... ++........+.|..++.+|+|+++++++++++.
T Consensus       160 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~  231 (250)
T PRK07774        160 VGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT-PKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDE  231 (250)
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh
Confidence            99999999999999999999999999999999865432 2233334456667788899999999999998863

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=1.4e-33  Score=224.80  Aligned_cols=203  Identities=18%  Similarity=0.182  Sum_probs=167.7

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCC--CEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      .++||||+||||++++++|++.|  ..|+...|+....  .  ..+++.++++|++++++++++.++++++|++|||||.
T Consensus         2 ~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~--~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~   77 (235)
T PRK09009          2 NILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--F--QHDNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGM   77 (235)
T ss_pred             EEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--c--ccCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCcc
Confidence            57899999999999999999985  5676666655321  1  1346788999999999999998999999999999998


Q ss_pred             CCC------CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc---cCCCCchhhHHHHHH
Q psy14567         92 ARF------DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT---ALEGHTIYSASKAAL  162 (238)
Q Consensus        92 ~~~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---~~~~~~~y~~sK~al  162 (238)
                      ...      ..+.+.+.++ |++.+++|+.+++.+++.++|.|.+++ .++++++||..+..   +.++...|+++|+++
T Consensus        78 ~~~~~~~~~~~~~~~~~~~-~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~  155 (235)
T PRK09009         78 LHTQDKGPEKSLQALDADF-FLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSISDNRLGGWYSYRASKAAL  155 (235)
T ss_pred             ccccccCcccccccCCHHH-HHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccccCCCCCcchhhhhHHHH
Confidence            742      2345666676 999999999999999999999998765 57999999866533   245567999999999


Q ss_pred             HHHHHHHHHHhCC--CCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGP--YNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~--~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++|+++++.|+.+  ++|+||.|+||+++|++....          ....|.++..+|+|+|+.+++++++.
T Consensus       156 ~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~a~~~~~l~~~~  217 (235)
T PRK09009        156 NMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF----------QQNVPKGKLFTPEYVAQCLLGIIANA  217 (235)
T ss_pred             HHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch----------hhccccCCCCCHHHHHHHHHHHHHcC
Confidence            9999999999986  699999999999999986431          12346788899999999999999874

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-33  Score=223.56  Aligned_cols=206  Identities=18%  Similarity=0.133  Sum_probs=178.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh-----CCCceEEEeecCCHHHHHHHHHhc-CCccEEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA-----FPNVQTVQVDLQDWARTRAAVSKV-GPVDVLI   86 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li   86 (238)
                      ++++||||+||||.+++++|+++|++|++++|+.++.++..+.     ..++.++++|++++++++++++++ .++|++|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv   81 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVL   81 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEE
Confidence            5788999999999999999999999999999998876654432     236889999999999999998876 4589999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||+|.....+..+.+.++ +.+.+++|+.+++.+++++.|.|.+++ .++++++||..+..+.++...|+++|+++++++
T Consensus        82 ~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  159 (243)
T PRK07102         82 IAVGTLGDQAACEADPAL-ALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDRGRASNYVYGSAKAALTAFL  159 (243)
T ss_pred             ECCcCCCCcccccCCHHH-HHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccCCCCCCcccHHHHHHHHHHH
Confidence            999987766677777777 899999999999999999999998766 689999999998888888899999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.++.+.||++++|+||+++|++.....            .|.....+|+++++.+..++++.
T Consensus       160 ~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        160 SGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK------------LPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHhhccCcEEEEEecCcccChhhhccC------------CCccccCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999764311            13345678999999999888773

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-33  Score=222.30  Aligned_cols=204  Identities=25%  Similarity=0.257  Sum_probs=171.8

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEEccC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLINNAA   90 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~~ag   90 (238)
                      +++++||||+||||++++++|+++|++|++++|+++.++++.+...++.++++|++++++++++++++ ..+|.+|+|||
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag   80 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG   80 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence            35789999999999999999999999999999999988888776667889999999999999999887 35899999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHH
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMA  170 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~  170 (238)
                      .....+..+.+.++ |++++++|+.+++++++++.|.|.+   +++++++||..+..+.++...|+++|++++++++.++
T Consensus        81 ~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~  156 (240)
T PRK06101         81 DCEYMDDGKVDATL-MARVFNVNVLGVANCIEGIQPHLSC---GHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQ  156 (240)
T ss_pred             ccccCCCCCCCHHH-HHHHHHHHHHHHHHHHHHHHHhhhc---CCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHH
Confidence            75443444567777 9999999999999999999999854   4689999999998888889999999999999999999


Q ss_pred             HHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        171 LELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       171 ~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      .|+.++||+++++.||+++|++.....    .        ......+|+++++.+...+.+
T Consensus       157 ~e~~~~gi~v~~v~pg~i~t~~~~~~~----~--------~~~~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        157 LDLRPKGIEVVTVFPGFVATPLTDKNT----F--------AMPMIITVEQASQEIRAQLAR  205 (240)
T ss_pred             HHHHhcCceEEEEeCCcCCCCCcCCCC----C--------CCCcccCHHHHHHHHHHHHhc
Confidence            999999999999999999999864310    0        011235777777777655443

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-33  Score=225.95  Aligned_cols=219  Identities=21%  Similarity=0.264  Sum_probs=185.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CCcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GPVD   83 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~id   83 (238)
                      .++++||||+|+||.+++++|+++|++|++++|+.+..++...+    ..++..+.+|++++++++++++++    +++|
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d   83 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVD   83 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            46889999999999999999999999999999998876655443    346788999999999998887654    7899


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||+|.....+..+.+.++ ++..+++|+.+++.+++.+++.+.+++ .+++|++||..+..+.++...|+++|++++
T Consensus        84 ~vi~~a~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~~~k~a~~  161 (258)
T PRK12429         84 ILVNNAGIQHVAPIEDFPTEK-WKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGSAGKAAYVSAKHGLI  161 (258)
T ss_pred             EEEECCCCCCCCChhhCCHHH-HHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCCCcchhHHHHHHHH
Confidence            999999988777777777777 899999999999999999999998876 689999999999888899999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCC---------c-cCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPA---------K-AGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~---------~-~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.++.++.+.||+++.+.||+++|++.........         . ...+....+.+++.+++|+|+++.+++++.
T Consensus       162 ~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  240 (258)
T PRK12429        162 GLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFA  240 (258)
T ss_pred             HHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999988643211100         0 011223446788999999999999999763

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-34  Score=227.79  Aligned_cols=218  Identities=23%  Similarity=0.281  Sum_probs=178.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh-HhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhc----C--C--c
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ-ANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV----G--P--V   82 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~----g--~--i   82 (238)
                      ++++||||+||||++++++|+++|++|++++|+. +.++++.+.. .++.++++|++++++++++++++    +  .  .
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSS   81 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCc
Confidence            5789999999999999999999999999999987 4555554433 45788999999999998888654    2  1  2


Q ss_pred             cEEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         83 DVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        83 d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +++|+|+|...+ .++.+.+.++ |.+.+++|+.+++.+++.++|.+.+.+..++||++||..+..+.++...|+++|++
T Consensus        82 ~~~v~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  160 (251)
T PRK06924         82 IHLINNAGMVAPIKPIEKAESEE-LITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAG  160 (251)
T ss_pred             eEEEEcceecccCcccccCCHHH-HHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHH
Confidence            289999997643 5566777787 99999999999999999999999875435799999999988888889999999999


Q ss_pred             HHHHHHHHHHHhC--CCCeEEEEEeCCceecCcccCCCC-CCC---ccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        162 LDSITRTMALELG--PYNIRVNSVQPTVVMTQMGRTGWS-DPA---KAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       162 l~~l~~~l~~~~~--~~~i~v~~i~PG~v~t~~~~~~~~-~~~---~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++++++.++.+++  +.+|+|++|.||+++|++...... ..+   ..+.+....+.+|+.+|+|+|+.+++++++
T Consensus       161 ~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  236 (251)
T PRK06924        161 LDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLET  236 (251)
T ss_pred             HHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhc
Confidence            9999999999975  568999999999999998643211 111   112233445778999999999999999987

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=1.9e-33  Score=253.30  Aligned_cols=222  Identities=22%  Similarity=0.253  Sum_probs=185.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHh----c
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+.+.++++.+..      ..+..+++|++|++++++++++    +
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~  491 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY  491 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            35679999999999999999999999999999999988776654432      2467889999999999887765    4


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      |++|++|||||.....++.+.+.++ |+..+++|+.+++.+++.+++.|.+++.+++||++||..+..+.++..+|+++|
T Consensus       492 g~iDilV~nAG~~~~~~~~~~~~e~-~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSK  570 (676)
T TIGR02632       492 GGVDIVVNNAGIATSSPFEETTLQE-WQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAK  570 (676)
T ss_pred             CCCcEEEECCCCCCCCCcccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHH
Confidence            8899999999987666777777777 999999999999999999999998765457999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecC--cccCCCC----------CCCccCCcccCCCCCCcCCCCCccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQ--MGRTGWS----------DPAKAGPMLAKTPLGRFAGKLKPKPWNRW  227 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~--~~~~~~~----------~~~~~~~~~~~~~~~r~~~~~~ia~~~~~  227 (238)
                      +++++++++++.+++++||+||+|+||.+.++  +....+.          ..+....+..+.|++|..+|+|+|+++.|
T Consensus       571 aA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~  650 (676)
T TIGR02632       571 AAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFF  650 (676)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999753  3211111          01111224456799999999999999999


Q ss_pred             ccccc
Q psy14567        228 LLPSV  232 (238)
Q Consensus       228 l~s~~  232 (238)
                      |+++.
T Consensus       651 L~s~~  655 (676)
T TIGR02632       651 LASSK  655 (676)
T ss_pred             HhCCc
Confidence            99863

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.8e-33  Score=223.74  Aligned_cols=217  Identities=28%  Similarity=0.377  Sum_probs=179.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      +.++++||||+||||.++++.|+++|++|++++|+.++.++..++    ..++..+++|++++++++++++.+    +++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            345788999999999999999999999999999998766554433    345788999999999988877654    789


Q ss_pred             cEEEEccCCCCCCCC---------CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCc
Q psy14567         83 DVLINNAAVARFDRF---------LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHT  153 (238)
Q Consensus        83 d~li~~ag~~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  153 (238)
                      |++|||+|.......         .+.+.++ ++.++++|+.+++.+.+.+.|.+.++...++++++||.. ..+.++..
T Consensus        84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~~  161 (253)
T PRK08217         84 NGLINNAGILRDGLLVKAKDGKVTSKMSLEQ-FQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQT  161 (253)
T ss_pred             CEEEECCCccCcCcccccccccccccCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCCc
Confidence            999999997643221         3455666 899999999999999999999998764367899999874 45667789


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      .|+++|+++++++++++.++.++||++++++||+++|++....  .++....+....|.+++++++|+++.+.||+++
T Consensus       162 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~  237 (253)
T PRK08217        162 NYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM--KPEALERLEKMIPVGRLGEPEEIAHTVRFIIEN  237 (253)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc--CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHcC
Confidence            9999999999999999999998999999999999999987542  233334445567888999999999999999876

>KOG1610|consensus

Probab=100.00  E-value=7.8e-33  Score=219.69  Aligned_cols=186  Identities=23%  Similarity=0.331  Sum_probs=168.4

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC--CCceEEEeecCCHHHHHHHHHhc----
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF--PNVQTVQVDLQDWARTRAAVSKV----   79 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~----   79 (238)
                      .+.+...+.++|||+-+|+|+.+|++|.+.|++|++.+-+++..+++..+.  ++...++.|++++++++++.+.+    
T Consensus        23 ~~~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l  102 (322)
T KOG1610|consen   23 VLDSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHL  102 (322)
T ss_pred             cccccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence            456678889999999999999999999999999999999998888887766  56888899999999999988655    


Q ss_pred             --CCccEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         80 --GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        80 --g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                        ..+..||||||+.. ..+.+-.+.++ +++++++|+.|++.++++++|++++++  ||||++||..|..+.|...+|+
T Consensus       103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d-~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR~~~p~~g~Y~  179 (322)
T KOG1610|consen  103 GEDGLWGLVNNAGISGFLGPDEWLTVED-YRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGRVALPALGPYC  179 (322)
T ss_pred             ccccceeEEeccccccccCccccccHHH-HHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccCccCcccccch
Confidence              35999999999764 45555566777 999999999999999999999998875  9999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR  194 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~  194 (238)
                      +||+|++.++.+++.|+.+.||+|..|.||+++|++..
T Consensus       180 ~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  180 VSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             hhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            99999999999999999999999999999999999874

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4e-33  Score=224.84  Aligned_cols=217  Identities=22%  Similarity=0.234  Sum_probs=177.7

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH-hHHHH----HhhCCCceEEEeecCCHHHHHHHHHhc----CCcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA-NLDSL----KQAFPNVQTVQVDLQDWARTRAAVSKV----GPVD   83 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id   83 (238)
                      ++++||||+||||.+++++|+++|++|++++|+.. ..++.    .....++.++++|+++++++.++++++    +++|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            57899999999999999999999999999998643 32222    222345889999999999998887655    7899


Q ss_pred             EEEEccCCCCC--CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-----CceEEEEccccccccCCCCchhh
Q psy14567         84 VLINNAAVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI-----QGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        84 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                      ++|||+|....  .++.+.+.++ ++..+++|+.+++.+++++.+.|.++..     .+++|++||..+..+.++...|+
T Consensus        83 ~vi~~ag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         83 CLVNNAGVGVKVRGDLLDLTPES-FDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             EEEECCccCCCCCCChhhCCHHH-HHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            99999997632  3455667777 9999999999999999999999987542     35799999999988888889999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCc-ccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPM-LAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+|++++++++.++.++.++||+++.|+||+++|++.....  +.....+ ....|++++++++|+++++.+++++.
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~  236 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVT--AKYDALIAKGLVPMPRWGEPEDVARAVAALASGD  236 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccc--hhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCc
Confidence            99999999999999999989999999999999999865421  1111111 12458889999999999999998763

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-33  Score=222.07  Aligned_cols=211  Identities=28%  Similarity=0.374  Sum_probs=177.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc---CCccEEEEc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV---GPVDVLINN   88 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~---g~id~li~~   88 (238)
                      .++++||||+||||++++++|+++|++|++++|+.+..      . ...++.+|++++++++++++++   .++|++|||
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~   75 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F-PGELFACDLADIEQTAATLAQINEIHPVDAIVNN   75 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c-CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence            35688999999999999999999999999999987641      1 2357899999999998877654   368999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRT  168 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~  168 (238)
                      +|.....++.+.+.++ +++.+++|+.+++.+.++++|.+++++ .++||++||.. ..+.+...+|+++|+++++++++
T Consensus        76 ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~~~~~  152 (234)
T PRK07577         76 VGIALPQPLGKIDLAA-LQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRT  152 (234)
T ss_pred             CCCCCCCChHHCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcccc-ccCCCCchHHHHHHHHHHHHHHH
Confidence            9988777777777787 999999999999999999999998776 68999999985 34666788999999999999999


Q ss_pred             HHHHhCCCCeEEEEEeCCceecCcccCCCCC-CCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        169 MALELGPYNIRVNSVQPTVVMTQMGRTGWSD-PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       169 l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++.++.+.||++++|+||+++|++....... ++.........|+++..+|+|+|+++.+|+++.
T Consensus       153 ~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~  217 (234)
T PRK07577        153 WALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDD  217 (234)
T ss_pred             HHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999986543211 122223445678888999999999999999874

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-33  Score=223.28  Aligned_cols=215  Identities=26%  Similarity=0.320  Sum_probs=176.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      ..++++||||++|||++++++|++.|++|+++.+ +.+..+++.++    ..++.++++|++|.+++.+++++    +++
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4568899999999999999999999999988765 44444444332    34578899999999999888765    478


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||.....++.+.+.++ |++++++|+.+++.+++++.+.+.++. .+++++++|..+..+.+....|+++|++
T Consensus        88 iD~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~~s~~~~~~~p~~~~Y~~sK~a  165 (258)
T PRK09134         88 ITLLVNNASLFEYDSAASFTRAS-WDRHMATNLRAPFVLAQAFARALPADA-RGLVVNMIDQRVWNLNPDFLSYTLSKAA  165 (258)
T ss_pred             CCEEEECCcCCCCCccccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECchhhcCCCCCchHHHHHHHH
Confidence            99999999988766777777787 999999999999999999999998765 6899999988776666777899999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++++.++.+. |++|.|+||++.|+....    ...........+.++..+++|+|+++.++++..
T Consensus       166 ~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~~----~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~  231 (258)
T PRK09134        166 LWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQS----PEDFARQHAATPLGRGSTPEEIAAAVRYLLDAP  231 (258)
T ss_pred             HHHHHHHHHHHhcCC-cEEEEeecccccCCcccC----hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCC
Confidence            999999999999876 999999999998865221    111122234567788899999999999999864

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=9.3e-33  Score=226.40  Aligned_cols=221  Identities=21%  Similarity=0.180  Sum_probs=176.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+.+.+++..++.    .++.++++|++|.++++++++.    +++
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            34578899999999999999999999999999999987766554432    3577899999999999887765    478


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----ceEEEEccccccccCCCCchhh
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ-----GSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-----g~iv~isS~~~~~~~~~~~~y~  156 (238)
                      +|++|||||.....++.+.+.++ |+..+++|+.+++.++++++|.|.++..+     |++|++||..+..+.++...|+
T Consensus        84 id~vi~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  162 (287)
T PRK06194         84 VHLLFNNAGVGAGGLVWENSLAD-WEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYN  162 (287)
T ss_pred             CCEEEECCCCCCCCCcccCCHHH-HHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchH
Confidence            99999999998777777778887 99999999999999999999999876532     7999999999988888889999


Q ss_pred             HHHHHHHHHHHHHHHHhC--CCCeEEEEEeCCceecCcccCCCCCC-CccCC------------cccCCCCCCcCCCCCc
Q psy14567        157 ASKAALDSITRTMALELG--PYNIRVNSVQPTVVMTQMGRTGWSDP-AKAGP------------MLAKTPLGRFAGKLKP  221 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~--~~~i~v~~i~PG~v~t~~~~~~~~~~-~~~~~------------~~~~~~~~r~~~~~~i  221 (238)
                      ++|+++++++++++.++.  ..+||++.++||+++|++.......+ .....            ...........+++|+
T Consensus       163 ~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv  242 (287)
T PRK06194        163 VSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAEEV  242 (287)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHHHH
Confidence            999999999999999987  45799999999999999875432111 11100            0000001112588999


Q ss_pred             cccccccccc
Q psy14567        222 KPWNRWLLPS  231 (238)
Q Consensus       222 a~~~~~l~s~  231 (238)
                      |+.+..++.+
T Consensus       243 a~~i~~~~~~  252 (287)
T PRK06194        243 AQLVFDAIRA  252 (287)
T ss_pred             HHHHHHHHHc
Confidence            9988886643

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-33  Score=224.11  Aligned_cols=217  Identities=29%  Similarity=0.359  Sum_probs=181.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC--CceEEEeecCCHHHHHHHHHh----cCCccEEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP--NVQTVQVDLQDWARTRAAVSK----VGPVDVLI   86 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~----~g~id~li   86 (238)
                      ++++||||+||||.+++++|++.|++|++++|+.+..+++.+...  .+.++++|+++.+++.+++++    ++++|++|
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLV   82 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            578999999999999999999999999999999888777665442  477889999999999877755    47899999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      |++|.....++.+.+.++ |...+++|+.+++.+.+++.+.+.+++ .++++++||..+... .+...|+.+|+++++++
T Consensus        83 ~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~~~  159 (257)
T PRK07074         83 ANAGAARAASLHDTTPAS-WRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAA-LGHPAYSAAKAGLIHYT  159 (257)
T ss_pred             ECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCC-CCCcccHHHHHHHHHHH
Confidence            999987766677777777 899999999999999999999998766 689999999776533 45679999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCC-CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.+++++||+++.++||+++|++...... .++.........|++++..++|+++++++|+++.
T Consensus       160 ~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  226 (257)
T PRK07074        160 KLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPA  226 (257)
T ss_pred             HHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCch
Confidence            99999999999999999999999998543211 1222222334568899999999999999999864

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-32  Score=223.52  Aligned_cols=220  Identities=16%  Similarity=0.211  Sum_probs=180.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      ..++++||||+|+||++++++|+++|++|++++|+.+..+++...    ..++.++.+|+++++++.++++++    +++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI   88 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            446889999999999999999999999999999988776554432    245778899999999998888654    789


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||.....+..+.+.++ ++..+++|+.+++.++++++|.+.+++ .++||++||..+..+.++...|+.+|+++
T Consensus        89 d~vi~~Ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  166 (274)
T PRK07775         89 EVLVSGAGDTYFGKLHEISTEQ-FESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQRPHMGAYGAAKAGL  166 (274)
T ss_pred             CEEEECCCcCCCcccccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCCCcchHHHHHHHH
Confidence            9999999987766667777777 899999999999999999999998765 68999999998888878888999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC--CccCCcc--cCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP--AKAGPML--AKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~--~~~~~~~--~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++.++.+.||++++|+||+++|++........  .......  ...+.+++..++|+|++++++++..
T Consensus       167 ~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        167 EAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETP  240 (274)
T ss_pred             HHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence            99999999999988999999999999998754321110  0000000  1223467899999999999999864

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.3e-32  Score=238.74  Aligned_cols=217  Identities=23%  Similarity=0.273  Sum_probs=181.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC--hHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT--QANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDV   84 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~   84 (238)
                      +.++++||||+||||.+++++|+++|++|++++|.  .+.++++.++. +...+.+|++++++++++++.+    +++|+
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~-~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV-GGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            45789999999999999999999999999999884  34455555544 3467899999999998887654    68999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||||+.....+.+.+.++ |+.++++|+.+++.+.+++.+.+..++ .++||++||..+..+.++...|+++|+++++
T Consensus       288 vi~~AG~~~~~~~~~~~~~~-~~~~~~~n~~g~~~l~~~~~~~~~~~~-~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~  365 (450)
T PRK08261        288 VVHNAGITRDKTLANMDEAR-WDSVLAVNLLAPLRITEALLAAGALGD-GGRIVGVSSISGIAGNRGQTNYAASKAGVIG  365 (450)
T ss_pred             EEECCCcCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCCCCChHHHHHHHHHHH
Confidence            99999988777777888888 999999999999999999999765444 6899999999988888889999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++.++.++||++|.|+||+++|++.......  ..+......++++.+.|+|+++++.||+++.
T Consensus       366 ~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~--~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~  431 (450)
T PRK08261        366 LVQALAPLLAERGITINAVAPGFIETQMTAAIPFA--TREAGRRMNSLQQGGLPVDVAETIAWLASPA  431 (450)
T ss_pred             HHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchh--HHHHHhhcCCcCCCCCHHHHHHHHHHHhChh
Confidence            99999999999999999999999999987542111  1111122356788899999999999999863

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-32  Score=225.77  Aligned_cols=182  Identities=20%  Similarity=0.221  Sum_probs=152.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh----hCC--CceEEEeecCCHHHHHHHHHhc----
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ----AFP--NVQTVQVDLQDWARTRAAVSKV----   79 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~--~~~~~~~D~~~~~~v~~~~~~~----   79 (238)
                      .+.++++||||++|||.++|++|+++|++|++++|+.++.++..+    ..+  .+.++++|+++.++++++++++    
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~   91 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG   91 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            356789999999999999999999999999999999877655433    222  4788999999999999888664    


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-----------
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-----------  148 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------  148 (238)
                      +++|++|||||+... +..+.+.++ ++..+++|+.+++.+++.++|.|.++  .++||++||..+..+           
T Consensus        92 ~~iD~li~nAG~~~~-~~~~~t~~~-~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~~~~~~~  167 (313)
T PRK05854         92 RPIHLLINNAGVMTP-PERQTTADG-FELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDDLNWER  167 (313)
T ss_pred             CCccEEEECCccccC-CccccCccc-HHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCcccccccc
Confidence            789999999998753 333455666 99999999999999999999999764  479999999876543           


Q ss_pred             -CCCCchhhHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCCceecCcccC
Q psy14567        149 -LEGHTIYSASKAALDSITRTMALEL--GPYNIRVNSVQPTVVMTQMGRT  195 (238)
Q Consensus       149 -~~~~~~y~~sK~al~~l~~~l~~~~--~~~~i~v~~i~PG~v~t~~~~~  195 (238)
                       .++...|+.||+|+.++++.++.++  .+.||+||+++||+++|++...
T Consensus       168 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~  217 (313)
T PRK05854        168 SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAA  217 (313)
T ss_pred             cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcccc
Confidence             2446789999999999999998864  4678999999999999998643

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-32  Score=221.90  Aligned_cols=217  Identities=24%  Similarity=0.302  Sum_probs=178.0

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHh----cCCccEEEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSK----VGPVDVLIN   87 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~----~g~id~li~   87 (238)
                      ++++||||+||||++++++|++.|++|++++|+.+.++++.+..+ ++.++++|++|.+++++++++    ++++|++||
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            568999999999999999999999999999999988887766543 588899999999999887754    478999999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHH
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITR  167 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~  167 (238)
                      |||.....+..+.+.++ +++.+++|+.+++.++++++|++++++ .+++|++||..+..+.++...|+.+|++++.+++
T Consensus        83 ~ag~~~~~~~~~~~~~~-~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  160 (276)
T PRK06482         83 NAGYGLFGAAEELSDAQ-IRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVE  160 (276)
T ss_pred             CCCCCCCcccccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccCCCCCchhHHHHHHHHHHHH
Confidence            99988777777777777 999999999999999999999998765 6899999999888888889999999999999999


Q ss_pred             HHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCcc--C-----Cc---ccCCCCCCcCCCCCccccccccccc
Q psy14567        168 TMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKA--G-----PM---LAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       168 ~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~--~-----~~---~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +++.++++.||+++.+.||.+.|++...........  .     .+   ...-+..-.++++|++++++..+..
T Consensus       161 ~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~  234 (276)
T PRK06482        161 AVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQ  234 (276)
T ss_pred             HHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcC
Confidence            999999999999999999999998864321111000  0     00   0111122236889999988887754

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.3e-32  Score=228.13  Aligned_cols=219  Identities=16%  Similarity=0.139  Sum_probs=167.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      .++++||||++|||++++++|++.| ++|++++|+.++.+++.++.    ..+.++++|+++.++++++++++    +++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            4588999999999999999999999 99999999998877665544    24678899999999998888664    789


Q ss_pred             cEEEEccCCCCCC-CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEEcccccccc------------
Q psy14567         83 DVLINNAAVARFD-RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK-IQGSIVNVSSIAGKTA------------  148 (238)
Q Consensus        83 d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~------------  148 (238)
                      |++|||||+..+. +..+.+.++ |+.++++|+.+++.+++.++|.|.+++ ..++||++||..+...            
T Consensus        83 D~lI~nAG~~~~~~~~~~~~~~~-~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~  161 (314)
T TIGR01289        83 DALVCNAAVYFPTAKEPRFTADG-FELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL  161 (314)
T ss_pred             CEEEECCCccccCccccccCHHH-HHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence            9999999975432 233456676 999999999999999999999998753 1479999999876321            


Q ss_pred             ---------------------CCCCchhhHHHHHHHHHHHHHHHHhC-CCCeEEEEEeCCce-ecCcccCCCCCCCccCC
Q psy14567        149 ---------------------LEGHTIYSASKAALDSITRTMALELG-PYNIRVNSVQPTVV-MTQMGRTGWSDPAKAGP  205 (238)
Q Consensus       149 ---------------------~~~~~~y~~sK~al~~l~~~l~~~~~-~~~i~v~~i~PG~v-~t~~~~~~~~~~~~~~~  205 (238)
                                           ..+..+|++||+++..+++.+++++. ++||++++|+||++ +|+|.............
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~  241 (314)
T TIGR01289       162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFP  241 (314)
T ss_pred             cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHH
Confidence                                 12346799999999999999999985 46999999999999 69986532110000000


Q ss_pred             cccCCCCCCcCCCCCccccccccccc
Q psy14567        206 MLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       206 ~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      .......+++.++++.|+.+.+++.+
T Consensus       242 ~~~~~~~~~~~~~~~~a~~l~~~~~~  267 (314)
T TIGR01289       242 PFQKYITKGYVSEEEAGERLAQVVSD  267 (314)
T ss_pred             HHHHHHhccccchhhhhhhhHHhhcC
Confidence            00111123456788888887777665

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-32  Score=219.22  Aligned_cols=219  Identities=28%  Similarity=0.382  Sum_probs=184.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEe-cCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIAL-SKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      .+++++||||+|+||.++++.|++.|++|+++ +|+.+..+++.+.    ..++.++++|+++++++.++++.+    ++
T Consensus         4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK05565          4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK   83 (247)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            45688999999999999999999999999998 9988776555443    235788999999999998877544    78


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++||++|.....+..+.+.++ ++..+++|+.+++.+++.+.+.+.+++ .+++|++||..+..+.+....|+.+|++
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~~~~~y~~sK~a  161 (247)
T PRK05565         84 IDILVNNAGISNFGLVTDMTDEE-WDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGASCEVLYSASKGA  161 (247)
T ss_pred             CCEEEECCCcCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCCCCccHHHHHHHH
Confidence            99999999988656666777777 999999999999999999999998776 6899999999888888888999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      ++.++++++.++...|++++.++||+++|++.+...  +..........+.+++.+++++++.+.++++...
T Consensus       162 ~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~  231 (247)
T PRK05565        162 VNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS--EEDKEGLAEEIPLGRLGKPEEIAKVVLFLASDDA  231 (247)
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC--hHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcc
Confidence            999999999999989999999999999998865432  1122222234567788899999999999998753

>KOG1209|consensus

Probab=100.00  E-value=7e-33  Score=207.64  Aligned_cols=182  Identities=26%  Similarity=0.373  Sum_probs=164.0

Q ss_pred             CCcCCCCCCCC-CCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-----CCcc
Q psy14567         10 DRTNTKGGDYP-KPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-----GPVD   83 (238)
Q Consensus        10 ~~~~v~~itG~-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-----g~id   83 (238)
                      ...+.++|||+ +||||.+++++|+++|+.|+++.|+.+...++..+. ++..+..|+++++++.++..++     |++|
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-GLKPYKLDVSKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-CCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence            34567777775 578999999999999999999999999999998665 4888999999999998877554     8999


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      +++||||..=..|..+.+.++ .++.+++|+.|.+.+++++.-.+.+.  +|+||+++|..+..+.+....|++||+|+.
T Consensus        84 ~L~NNAG~~C~~Pa~d~~i~a-ve~~f~vNvfG~irM~~a~~h~lika--KGtIVnvgSl~~~vpfpf~~iYsAsKAAih  160 (289)
T KOG1209|consen   84 LLYNNAGQSCTFPALDATIAA-VEQCFKVNVFGHIRMCRALSHFLIKA--KGTIVNVGSLAGVVPFPFGSIYSASKAAIH  160 (289)
T ss_pred             EEEcCCCCCcccccccCCHHH-HHhhhccceeeeehHHHHHHHHHHHc--cceEEEecceeEEeccchhhhhhHHHHHHH
Confidence            999999987667788888888 99999999999999999999666655  599999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccC
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRT  195 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~  195 (238)
                      .+++.|+.|+++.||+|..+.||-+.|.+..+
T Consensus       161 ay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  161 AYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             HhhhhcEEeeeccccEEEEecccceecccccC
Confidence            99999999999999999999999999988765

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=3.3e-32  Score=218.22  Aligned_cols=218  Identities=24%  Similarity=0.316  Sum_probs=177.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEE-ecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CCcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIA-LSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GPVD   83 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~id   83 (238)
                      ++++||||+|+||++++++|+++|++|++ ..|+.+..++...+    ..++..+++|++|+++++++++++    +++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            57899999999999999999999999876 46776665544332    235788999999999998888654    7899


Q ss_pred             EEEEccCCC-CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCceEEEEccccccccCCC-CchhhHHH
Q psy14567         84 VLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK--IQGSIVNVSSIAGKTALEG-HTIYSASK  159 (238)
Q Consensus        84 ~li~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~-~~~y~~sK  159 (238)
                      ++|||+|.. ...+..+.+.++ |+.++++|+.+++.+++.+++.+.++.  .+|++|++||..+..+.++ ...|+++|
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAER-INRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            999999975 334556677777 999999999999999999999987652  2478999999988776664 46899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.+++.++.++.++||+++.++||.++|++..... .+..........|+++..+++|+|+.+.|++++.
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~  232 (247)
T PRK09730        161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG-EPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDK  232 (247)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChh
Confidence            99999999999999989999999999999999754321 2222223334568888889999999999999874

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.3e-32  Score=216.25  Aligned_cols=210  Identities=27%  Similarity=0.385  Sum_probs=178.0

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CCcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GPVD   83 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~id   83 (238)
                      .++++||||+||||.+++++|++.|++|++++|+.+..+++.++    ..++.++++|++++++++++++++    +++|
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID   86 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence            46789999999999999999999999999999998765554332    235778899999999998887654    7899


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||+|......+.+.+.++ +++.+++|+.+++.+++++.+.+.+++ .+++|++||..+..+.++...|+.+|++++
T Consensus        87 ~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~  164 (239)
T PRK07666         87 ILINNAGISKFGKFLELDPAE-WEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGAAVTSAYSASKFGVL  164 (239)
T ss_pred             EEEEcCccccCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCCCCCcchHHHHHHHH
Confidence            999999987666677777787 999999999999999999999998776 689999999999888888899999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.++.++.++||+++.|.||.+.|++.......        ...| .++.+++|+|+.+..+++..
T Consensus       165 ~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--------~~~~-~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        165 GLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT--------DGNP-DKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc--------ccCC-CCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999986432111        0112 34678999999999988773

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-33  Score=223.07  Aligned_cols=214  Identities=23%  Similarity=0.274  Sum_probs=173.8

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh-----c---CCccEE
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK-----V---GPVDVL   85 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-----~---g~id~l   85 (238)
                      +++||||+||||++++++|+++|++|++++|+.+... ......++.++++|+++++++++++++     +   +++|++
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL-AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLL   81 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh-hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEE
Confidence            5789999999999999999999999999999865421 122223578899999999999886543     2   479999


Q ss_pred             EEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         86 INNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        86 i~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      |||+|.... .+..+.+.++ ++..+++|+.+++.+++.+.+.+.+++ .++||++||..+..+.++...|+++|+++++
T Consensus        82 v~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  159 (243)
T PRK07023         82 INNAGTVEPIGPLATLDAAA-IARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARNAYAGWSVYCATKAALDH  159 (243)
T ss_pred             EEcCcccCCCCccccCCHHH-HHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcCCCCCchHHHHHHHHHHH
Confidence            999998654 4556667777 999999999999999999999998765 6899999999998888899999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC----CccCCcccCCCCCCcCCCCCccc-cccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP----AKAGPMLAKTPLGRFAGKLKPKP-WNRWLLPS  231 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~r~~~~~~ia~-~~~~l~s~  231 (238)
                      +++.++.+ .+.||+++.|+||+++|++........    .....+....|.+++.+|+|+|+ .+.+|+++
T Consensus       160 ~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~  230 (243)
T PRK07023        160 HARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSD  230 (243)
T ss_pred             HHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhcc
Confidence            99999999 788999999999999999854211111    11122344567899999999999 56677665

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.3e-32  Score=216.17  Aligned_cols=214  Identities=20%  Similarity=0.257  Sum_probs=177.6

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeecC--CHHHHHHHHHh--
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQ--DWARTRAAVSK--   78 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~--~~~~v~~~~~~--   78 (238)
                      ...+.++++||||+|+||.+++++|++.|++|++++|+.+..+++.++.     ..+.++.+|++  ++++++++++.  
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence            3456788999999999999999999999999999999988766554432     24667788886  67777666544  


Q ss_pred             --cCCccEEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchh
Q psy14567         79 --VGPVDVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIY  155 (238)
Q Consensus        79 --~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y  155 (238)
                        ++++|++|||||.... .++.+.+.++ +++.+++|+.+++.+++++.|.|.+++ .++|+++||..+..+.++..+|
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~-~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y  165 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEV-WQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGRANWGAY  165 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHH-HHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCCCCCccc
Confidence              4789999999997643 3455666777 999999999999999999999998776 6899999999988888889999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      +++|++++.+++.++.++...||+++.++||.++|++........          +..++.+|+|+++.+.|++++..
T Consensus       166 ~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~  233 (247)
T PRK08945        166 AVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE----------DPQKLKTPEDIMPLYLYLMGDDS  233 (247)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc----------cccCCCCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999999754332111          12457899999999999998743

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-32  Score=217.09  Aligned_cols=214  Identities=29%  Similarity=0.415  Sum_probs=177.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecC----ChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----C
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK----TQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----G   80 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g   80 (238)
                      ++++||||+||||+++++.|+++|++|++++|    +.+..+++.++    ..++.++.+|++++++++++++++    +
T Consensus         7 ~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (249)
T PRK12827          7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFG   86 (249)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            56889999999999999999999999988665    34444444333    245788999999999998887653    7


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVS-KTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      ++|++|||+|.....++.+.+.++ |++.+++|+.+++.+++++. +.+.+++ .+++|++||..+..+.++...|+.+|
T Consensus        87 ~~d~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y~~sK  164 (249)
T PRK12827         87 RLDILVNNAGIATDAAFAELSIEE-WDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGNRGQVNYAASK  164 (249)
T ss_pred             CCCEEEECCCCCCCCCcccCCHHH-HHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCCCCCchhHHHH
Confidence            899999999988777777788887 99999999999999999999 5555444 57999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.+++.++.++.+.|++++.++||+++|++.......    .......|.++..+++|+++.+++++++.
T Consensus       165 ~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~va~~~~~l~~~~  233 (249)
T PRK12827        165 AGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT----EHLLNPVPVQRLGEPDEVAALVAFLVSDA  233 (249)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH----HHHHhhCCCcCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999998899999999999999986543211    22334457777889999999999999763

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=3.4e-32  Score=218.86  Aligned_cols=217  Identities=29%  Similarity=0.382  Sum_probs=175.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh--HHHHHhhCC-----CceEEEeecCC-HHHHHHHHHh---
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN--LDSLKQAFP-----NVQTVQVDLQD-WARTRAAVSK---   78 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~-----~~~~~~~D~~~-~~~v~~~~~~---   78 (238)
                      ...++++||||++|||+++|+.|++.|++|+++.|+.+.  .+.+.+...     ...+.++|+++ .++++.++++   
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            456789999999999999999999999998888877553  344443333     57778899998 9988877754   


Q ss_pred             -cCCccEEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCC-Cchh
Q psy14567         79 -VGPVDVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEG-HTIY  155 (238)
Q Consensus        79 -~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~y  155 (238)
                       +|++|++|||||+... .++.+.+.++ |++++++|+.+++.+++.+.|.+.+   . +||++||..+. +.++ ..+|
T Consensus        83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~-~~~~~~~n~~g~~~~~~~~~~~~~~---~-~Iv~isS~~~~-~~~~~~~~Y  156 (251)
T COG1028          83 EFGRIDILVNNAGIAGPDAPLEELTEED-WDRVIDVNLLGAFLLTRAALPLMKK---Q-RIVNISSVAGL-GGPPGQAAY  156 (251)
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHH-HHHHHHHhHHHHHHHHHHHHHhhhh---C-eEEEECCchhc-CCCCCcchH
Confidence             4889999999999876 4788888887 9999999999999999988888873   3 99999999998 7777 4999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCC-ccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPA-KAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++||+|+.+|++.++.++.++||++|.|+||+++|++......... .........|.+|++.|.++++.+.|+.+..
T Consensus       157 ~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (251)
T COG1028         157 AASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDE  234 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999998764322210 0011111116668889999999988887664

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.8e-32  Score=217.07  Aligned_cols=216  Identities=28%  Similarity=0.389  Sum_probs=174.4

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC-hHhHH----HHHhhCCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT-QANLD----SLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~----~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      .++++||||+|+||++++++|+++|++|++..|+ .+...    .+.+...+..++.+|+++++++.+++++    ++++
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA   85 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            4688999999999999999999999998877654 33322    2222223567889999999998887765    4789


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||.....++.+.+.++ ++..+++|+.+.+.+++++.|.+.+   .+++|++||..+..+.++...|+++|+++
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~  161 (252)
T PRK06077         86 DILVNNAGLGLFSPFLNVDDKL-IDKHISTDFKSVIYCSQELAKEMRE---GGAIVNIASVAGIRPAYGLSIYGAMKAAV  161 (252)
T ss_pred             CEEEECCCCCCCCChhhCCHHH-HHHHHhHhCHHHHHHHHHHHHHhhc---CcEEEEEcchhccCCCCCchHHHHHHHHH
Confidence            9999999987777777777776 8999999999999999999999865   47999999999988888999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCc-cCC-cccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK-AGP-MLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~-~~~-~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++.++++ +|+++.+.||+++|++.......... .+. .....+.+++.+|+|+|++++++++..
T Consensus       162 ~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~  232 (252)
T PRK06077        162 INLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIE  232 (252)
T ss_pred             HHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCcc
Confidence            9999999999988 89999999999999986432211110 011 112245678899999999999999754

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=7.1e-32  Score=216.70  Aligned_cols=219  Identities=31%  Similarity=0.377  Sum_probs=183.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHH----HHhhCCCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      ..++++||||+|+||.+++++|+++|++|++++|+.++.++    +.....++.++.+|++|+++++++++++    +++
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            34578999999999999999999999999999999665443    3333445888999999999998888654    789


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-ccCCCCchhhHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-TALEGHTIYSASKAA  161 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~~y~~sK~a  161 (238)
                      |++||++|.....++.+.+.++ ++..++.|+.+++.++++++|.+.+++ .++++++||..+. .+.++...|+.+|++
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~~~~~y~~sK~a  162 (251)
T PRK12826         85 DILVANAGIFPLTPFAEMDDEQ-WERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRVGYPGLAHYAASKAG  162 (251)
T ss_pred             CEEEECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhccCCCCccHHHHHHHH
Confidence            9999999988776777777777 899999999999999999999998776 6899999999887 677888999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++.++.++.+.|++++.+.||.+.|++...... ...........|.+++.+++|+|+++.++++..
T Consensus       163 ~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  232 (251)
T PRK12826        163 LVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD-AQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDE  232 (251)
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999998889999999999999997643211 111223344568889999999999999998754

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=216.71  Aligned_cols=213  Identities=23%  Similarity=0.314  Sum_probs=177.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CCccE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GPVDV   84 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~id~   84 (238)
                      ++++||||+||||.++++.|++.|++|++++|+.+..+++.+.    ..++.++.+|++|+++++++++++    +++|+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999999999999999999999999999998776554332    335778899999999998877654    78999


Q ss_pred             EEEccCCCCCCCCCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDI-DEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        85 li~~ag~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      +|||+|.....++.+. +.++ +...+++|+.+++.+++.+.|.+.++  .+++|++||..+..+.++...|+.+|++++
T Consensus        82 vi~~ag~~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~  158 (263)
T PRK06181         82 LVNNAGITMWSRFDELTDLSV-FERVMRVNYLGAVYCTHAALPHLKAS--RGQIVVVSSLAGLTGVPTRSGYAASKHALH  158 (263)
T ss_pred             EEECCCcccccchhccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhc--CCEEEEEecccccCCCCCccHHHHHHHHHH
Confidence            9999998876667777 6776 89999999999999999999998654  479999999998888888899999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCC--CCCcCCCCCccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTP--LGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +++++++.++.+++++++++.||.+.|++..........   .....+  ..++.+|+|+|+.+.+++++
T Consensus       159 ~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        159 GFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGK---PLGKSPMQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             HHHHHHHHHhhhcCceEEEEecCccccCcchhhcccccc---ccccccccccCCCCHHHHHHHHHHHhhC
Confidence            999999999999999999999999999987643221110   011122  24788999999999999876

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.98  E-value=9.3e-32  Score=217.71  Aligned_cols=222  Identities=26%  Similarity=0.328  Sum_probs=184.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCC--ceEEEeecCCHHHHHHHHHhc----CCcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN--VQTVQVDLQDWARTRAAVSKV----GPVD   83 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~D~~~~~~v~~~~~~~----g~id   83 (238)
                      .+.++++||||+|+||++++++|+++|++|++++|+++..+++.+..++  +.++.+|++|++++.++++++    +++|
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   88 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD   88 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            4567899999999999999999999999999999998888777665544  488999999999998877654    7899


Q ss_pred             EEEEccCCC-CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         84 VLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        84 ~li~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      ++||++|.. ........+.++ +.+.+++|+.+++.+++.+++.+...+.+++++++||..+..+.++...|+.+|+++
T Consensus        89 ~vi~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~  167 (264)
T PRK12829         89 VLVNNAGIAGPTGGIDEITPEQ-WEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAV  167 (264)
T ss_pred             EEEECCCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHH
Confidence            999999987 444555667777 999999999999999999999887765237899999988888888888999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC---------CCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD---------PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.+++.++.+++..+++++.+.||++.|++.......         ...........|.+++.+++|+++++.+++++.
T Consensus       168 ~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  246 (264)
T PRK12829        168 VGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASPA  246 (264)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            9999999999988899999999999999986432210         011112234467788999999999999998763

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.98  E-value=6.4e-31  Score=211.07  Aligned_cols=205  Identities=17%  Similarity=0.204  Sum_probs=170.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      .++++||||+||||++++++|++.|++|++++|+.++.+++.+..      ..+.++++|+++++++.++++++    ++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            357899999999999999999999999999999998776664432      25788899999999998877654    78


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCC-CchhhHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEG-HTIYSASKA  160 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~y~~sK~  160 (238)
                      +|++|||||+....+..+.+.+. +++.+++|+.+++.+++.+.|.+.+.+ .+++|++||..+..+.++ ...|+.||+
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  159 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWA-NKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGLPGVKAAYAASKA  159 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCCCCCcccHHHHHH
Confidence            99999999998766666667776 899999999999999999999998766 679999999988777664 689999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +++++++.++.++...||+++.|+||+++|++.+....             .....++++.|+.+...+..
T Consensus       160 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------------~~~~~~~~~~a~~i~~~~~~  217 (248)
T PRK08251        160 GVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-------------TPFMVDTETGVKALVKAIEK  217 (248)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-------------CCccCCHHHHHHHHHHHHhc
Confidence            99999999999999889999999999999998754211             11245667776666554443

>PRK08324 short chain dehydrogenase; Validated

Probab=99.98  E-value=1.5e-31  Score=242.12  Aligned_cols=220  Identities=24%  Similarity=0.279  Sum_probs=188.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC---CceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP---NVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      ..++++||||+||||+++++.|+++|++|++++|+.+.++.+.+...   ++.++.+|+++++++++++++    +|++|
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD  500 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD  500 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            45789999999999999999999999999999999988776655442   678899999999998887765    47899


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||.....++.+.+.++ |+..+++|+.+++.+++++.+.+++++.+|+||++||..+..+.++...|+++|++++
T Consensus       501 vvI~~AG~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~  579 (681)
T PRK08324        501 IVVSNAGIAISGPIEETSDED-WRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAEL  579 (681)
T ss_pred             EEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHHH
Confidence            999999998777788888887 9999999999999999999999988663489999999999888888999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCce--ecCcccCCCCC----------CCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVV--MTQMGRTGWSD----------PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v--~t~~~~~~~~~----------~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +++++++.++.++||++|.|+||.+  .|++....+..          .+..+....+.+++++..++|+|+++.+++++
T Consensus       580 ~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~  659 (681)
T PRK08324        580 HLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLASG  659 (681)
T ss_pred             HHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999  88765432111          11111244567889999999999999999864

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.98  E-value=3.6e-31  Score=212.00  Aligned_cols=216  Identities=29%  Similarity=0.417  Sum_probs=180.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-HHHH----HhhCCCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-LDSL----KQAFPNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      .++++||||+|+||.+++++|+++|++|+++.|+... .+..    .....++..+++|+++++++.++++++    +++
T Consensus         5 ~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (248)
T PRK05557          5 GKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGV   84 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999999999999999999999999888776542 3332    223346788899999999998877654    689


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++||++|.....+..+.+.++ +++.+++|+.+++.+.+++.+.+.+.+ .++++++||..+..+.++...|+.+|+++
T Consensus        85 d~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~~~~~~~~y~~sk~a~  162 (248)
T PRK05557         85 DILVNNAGITRDNLLMRMKEED-WDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLMGNPGQANYAASKAGV  162 (248)
T ss_pred             CEEEECCCcCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCcCCCCCchhHHHHHHH
Confidence            9999999988766666777777 899999999999999999999997765 57999999998888888889999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +.+++.++.++...|++++.++||+++|++.+..  .+..........|.+++.+++|+++++.+|+++
T Consensus       163 ~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~  229 (248)
T PRK05557        163 IGFTKSLARELASRGITVNAVAPGFIETDMTDAL--PEDVKEAILAQIPLGRLGQPEEIASAVAFLASD  229 (248)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEecCccCCcccccc--ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCc
Confidence            9999999999998999999999999999886542  222333344556778889999999999999876

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.98  E-value=1.6e-31  Score=202.59  Aligned_cols=224  Identities=19%  Similarity=0.212  Sum_probs=194.9

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh---HhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc---
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ---ANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV---   79 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~---   79 (238)
                      .|++|+..+++| .-.+.|+..||+.|.++|+++..+..++   .+.+++.++.+...+++||++++++++++++++   
T Consensus         3 ~L~GK~~lI~Gv-an~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~   81 (259)
T COG0623           3 LLEGKRILIMGV-ANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKK   81 (259)
T ss_pred             ccCCceEEEEEe-cccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHh
Confidence            477888888777 5778899999999999999999988775   456667777767778999999999999988665   


Q ss_pred             -CCccEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCch
Q psy14567         80 -GPVDVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTI  154 (238)
Q Consensus        80 -g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  154 (238)
                       |++|.++|+.++.+.    +++.+.+.+. |...+++..++...+.+++.|.|..   +|.++.++-..+....|.+..
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~-f~~a~~IS~YS~~~lak~a~~lM~~---ggSiltLtYlgs~r~vPnYNv  157 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREG-FLIAMDISAYSFTALAKAARPLMNN---GGSILTLTYLGSERVVPNYNV  157 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHH-HHhHhhhhHhhHHHHHHHHHHhcCC---CCcEEEEEeccceeecCCCch
Confidence             899999999998753    5677778888 9999999999999999999999975   579999998888888899999


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGL  234 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~  234 (238)
                      .+.+|++|+.-+|.|+.+++++|||||.|+.|+++|--.........+.+......|++|..+++|+.+...||+||+..
T Consensus       158 MGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLss  237 (259)
T COG0623         158 MGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSS  237 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhc
Confidence            99999999999999999999999999999999999976655444455566677888999999999999999999999643

>KOG1208|consensus

Probab=99.98  E-value=1.1e-31  Score=219.63  Aligned_cols=181  Identities=24%  Similarity=0.308  Sum_probs=152.6

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----C--CceEEEeecCCHHHHHHHHHhc---
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----P--NVQTVQVDLQDWARTRAAVSKV---   79 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~v~~~~~~~---   79 (238)
                      ....+|++||||++|||.++|++|+.+|++|++.+|+.++.++..+..    +  ++.++++|+++.++|+++.+++   
T Consensus        32 ~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~  111 (314)
T KOG1208|consen   32 DLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK  111 (314)
T ss_pred             cCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence            345579999999999999999999999999999999987655544433    2  4778999999999999998776   


Q ss_pred             -CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc----------
Q psy14567         80 -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA----------  148 (238)
Q Consensus        80 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------  148 (238)
                       +++|++|||||+.....  ..+.+. ++..+++|+.|++.+++.++|.++.+. ++|||++||......          
T Consensus       112 ~~~ldvLInNAGV~~~~~--~~t~DG-~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~~~~~~~~~l~~~~  187 (314)
T KOG1208|consen  112 EGPLDVLINNAGVMAPPF--SLTKDG-LELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILGGGKIDLKDLSGEK  187 (314)
T ss_pred             CCCccEEEeCcccccCCc--ccCccc-hhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccccCccchhhccchh
Confidence             78999999999986544  444455 899999999999999999999999877 489999999875100          


Q ss_pred             ---CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecC-ccc
Q psy14567        149 ---LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ-MGR  194 (238)
Q Consensus       149 ---~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~-~~~  194 (238)
                         .....+|+.||.+...+++.|++++.+ ||.+++++||.+.|+ +.+
T Consensus       188 ~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r  236 (314)
T KOG1208|consen  188 AKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR  236 (314)
T ss_pred             ccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec
Confidence               222346999999999999999999998 999999999999999 444

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=7.9e-31  Score=210.06  Aligned_cols=218  Identities=29%  Similarity=0.395  Sum_probs=180.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH-hHHHHH----hhCCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA-NLDSLK----QAFPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~----~~~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      .+++++||||+|+||++++++|++.|++|++..|+.. ..+.+.    ....++.++.+|+++++++.++++++    ++
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   84 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence            3568899999999999999999999999877666543 333332    22345888999999999998887654    78


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++||++|.....++.+.+.++ ++..+++|+.+++.+++.+.+.+.+.+ .++++++||..+..+.++...|+.+|++
T Consensus        85 id~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~~~~~~y~~sK~~  162 (249)
T PRK12825         85 IDILVNNAGIFEDKPLADMSDDE-WDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGWPGRSNYAAAKAG  162 (249)
T ss_pred             CCEEEECCccCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCCCCchHHHHHHHH
Confidence            99999999987766766777777 999999999999999999999998766 6799999999988888888999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++.++.++...|++++.++||.+.|++........ .... ....|.+++.+++|+++.+.+++++.
T Consensus       163 ~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~dva~~~~~~~~~~  231 (249)
T PRK12825        163 LVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEA-REAK-DAETPLGRSGTPEDIARAVAFLCSDA  231 (249)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchh-HHhh-hccCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999988999999999999999865432111 1111 22467888999999999999999764

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.97  E-value=3.3e-31  Score=220.67  Aligned_cols=185  Identities=17%  Similarity=0.166  Sum_probs=152.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      .+.++++||||+||||.+++++|+++|++|++++|+.++.+++.++.    .++.++++|+++.++++++++++    ++
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            35678999999999999999999999999999999998877665543    35788999999999998888664    57


Q ss_pred             ccEEEEccCCCCCC-CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CceEEEEccccccc------------
Q psy14567         82 VDVLINNAAVARFD-RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI-QGSIVNVSSIAGKT------------  147 (238)
Q Consensus        82 id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------------  147 (238)
                      +|++|||||+.... ...+.+.++ ++..+++|+.+++.+++.++|.|.+++. .++||++||.....            
T Consensus        84 iD~li~nAg~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~  162 (322)
T PRK07453         84 LDALVCNAAVYMPLLKEPLRSPQG-YELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP  162 (322)
T ss_pred             ccEEEECCcccCCCCCCCCCCHHH-HHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc
Confidence            99999999976432 223456676 9999999999999999999999987652 26999999965421            


Q ss_pred             -----------------------cCCCCchhhHHHHHHHHHHHHHHHHhC-CCCeEEEEEeCCce-ecCcccC
Q psy14567        148 -----------------------ALEGHTIYSASKAALDSITRTMALELG-PYNIRVNSVQPTVV-MTQMGRT  195 (238)
Q Consensus       148 -----------------------~~~~~~~y~~sK~al~~l~~~l~~~~~-~~~i~v~~i~PG~v-~t~~~~~  195 (238)
                                             +..+..+|+.||.+...+++.+++++. .+||++++++||+| .|++.+.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~  235 (322)
T PRK07453        163 ADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRN  235 (322)
T ss_pred             cchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCccccc
Confidence                                   112346899999999999999999995 46999999999999 5887543

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.1e-31  Score=218.63  Aligned_cols=185  Identities=19%  Similarity=0.206  Sum_probs=151.8

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh----hC--CCceEEEeecCCHHHHHHHHHhc-
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ----AF--PNVQTVQVDLQDWARTRAAVSKV-   79 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~D~~~~~~v~~~~~~~-   79 (238)
                      +...+.++++||||+||||.++|++|+++|++|++++|+.+..++..+    ..  .++.++++|++|.++++++++++ 
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            344566889999999999999999999999999999999876554322    22  35778899999999998887654 


Q ss_pred             ---CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc---------
Q psy14567         80 ---GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT---------  147 (238)
Q Consensus        80 ---g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------  147 (238)
                         +++|++|||||+....  .+.+.++ ++..+++|+.+++.+++.++|.+.+.+ .++||++||..+..         
T Consensus        91 ~~~~~iD~li~nAg~~~~~--~~~~~~~-~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~  166 (306)
T PRK06197         91 AAYPRIDLLINNAGVMYTP--KQTTADG-FELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFDDL  166 (306)
T ss_pred             hhCCCCCEEEECCccccCC--CccCCCC-cchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCcccc
Confidence               7899999999986432  2344455 888999999999999999999998765 58999999987543         


Q ss_pred             ----cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEE--eCCceecCcccC
Q psy14567        148 ----ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSV--QPTVVMTQMGRT  195 (238)
Q Consensus       148 ----~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i--~PG~v~t~~~~~  195 (238)
                          +.++..+|+.||++++++++.++.+++++|++++++  +||+++|++.+.
T Consensus       167 ~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~  220 (306)
T PRK06197        167 QWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARN  220 (306)
T ss_pred             CcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccccc
Confidence                223456899999999999999999998888777655  799999998754

>KOG1611|consensus

Probab=99.97  E-value=1.3e-30  Score=197.42  Aligned_cols=183  Identities=25%  Similarity=0.312  Sum_probs=151.0

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhh-CCCEE-EEecCChHh-HHHHHhh---CCCceEEEeecCCHHHHHHHHHhc------
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQ-HEAII-IALSKTQAN-LDSLKQA---FPNVQTVQVDLQDWARTRAAVSKV------   79 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~-~G~~V-~~~~r~~~~-~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~------   79 (238)
                      .+.+.||||++|||..++++|.. .|-.+ +.+.|+.+. .+++...   -++++.++.|+++.+++.++++++      
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            34589999999999999999986 46654 556677777 3344332   368999999999999999999877      


Q ss_pred             CCccEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC----------CceEEEEcccccccc
Q psy14567         80 GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI----------QGSIVNVSSIAGKTA  148 (238)
Q Consensus        80 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----------~g~iv~isS~~~~~~  148 (238)
                      ..+|++|+|||+.. +....+.+.+. |-+.+++|..+++.++|+|+|++++...          ...||++||..+..+
T Consensus        83 ~GlnlLinNaGi~~~y~~~~~~~r~~-~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~  161 (249)
T KOG1611|consen   83 DGLNLLINNAGIALSYNTVLKPSRAV-LLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIG  161 (249)
T ss_pred             CCceEEEeccceeeecccccCCcHHH-HHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccC
Confidence            36899999999884 34444555555 8899999999999999999999988642          247999999887653


Q ss_pred             ---CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccC
Q psy14567        149 ---LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT  195 (238)
Q Consensus       149 ---~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~  195 (238)
                         ..+..+|..||+|+++|+|+++.|+++++|-|..+|||+|+|+|...
T Consensus       162 ~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~  211 (249)
T KOG1611|consen  162 GFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK  211 (249)
T ss_pred             CCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC
Confidence               34568999999999999999999999999999999999999999753

>PRK09135 pteridine reductase; Provisional

Probab=99.97  E-value=5.2e-31  Score=211.43  Aligned_cols=217  Identities=28%  Similarity=0.370  Sum_probs=176.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh-HhHHHHHhh----C-CCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ-ANLDSLKQA----F-PNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~----~-~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      +.++++||||+|+||++++++|++.|++|++++|+. +..+++...    . ..+.++.+|+++++++.+++++    ++
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            446899999999999999999999999999999864 334333221    1 2477889999999999888765    47


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||.....++.+.+.++ ++..+++|+.+++.+++++.|.+.++  .+.+++++|..+..+.++...|+.+|+
T Consensus        85 ~~d~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Y~~sK~  161 (249)
T PRK09135         85 RLDALVNNASSFYPTPLGSITEAQ-WDDLFASNLKAPFFLSQAAAPQLRKQ--RGAIVNITDIHAERPLKGYPVYCAAKA  161 (249)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHH-HHHHHHHhchhHHHHHHHHHHHHhhC--CeEEEEEeChhhcCCCCCchhHHHHHH
Confidence            899999999987666666667777 89999999999999999999998765  478898888877778888899999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++.+++.++.++.+ +++++.+.||++.|++....+. .........+.+..+.++++|+++++.+++.+.
T Consensus       162 ~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~  231 (249)
T PRK09135        162 ALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSFD-EEARQAILARTPLKRIGTPEDIAEAVRFLLADA  231 (249)
T ss_pred             HHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccCC-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999976 6999999999999998643222 222223334557788889999999998888753

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-30  Score=206.78  Aligned_cols=179  Identities=27%  Similarity=0.325  Sum_probs=154.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEccC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNAA   90 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~ag   90 (238)
                      ++++||||+||||.+++++|+++|++|++++|+.++.+++.+ ..++.++.+|++|+++++++++.+  +++|++|||||
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-LPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-ccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            578899999999999999999999999999999887766543 346788899999999999998877  57999999999


Q ss_pred             CCCC--CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC---CCCchhhHHHHHHHHH
Q psy14567         91 VARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL---EGHTIYSASKAALDSI  165 (238)
Q Consensus        91 ~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~y~~sK~al~~l  165 (238)
                      +...  .+..+.+.++ +++.+++|+.+++.+.++++|.+.+.  .+.++++||..+..+.   .+...|+++|++++++
T Consensus        81 ~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~  157 (225)
T PRK08177         81 ISGPAHQSAADATAAE-IGQLFLTNAIAPIRLARRLLGQVRPG--QGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSM  157 (225)
T ss_pred             ccCCCCCCcccCCHHH-HhhheeeeeeHHHHHHHHHHHhhhhc--CCEEEEEccCccccccCCCCCccchHHHHHHHHHH
Confidence            8643  3455667777 99999999999999999999998653  4789999998775543   3567899999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccC
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRT  195 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~  195 (238)
                      ++.++.+++++||++|+|+||+++|++...
T Consensus       158 ~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~  187 (225)
T PRK08177        158 TRSFVAELGEPTLTVLSMHPGWVKTDMGGD  187 (225)
T ss_pred             HHHHHHHhhcCCeEEEEEcCCceecCCCCC
Confidence            999999999999999999999999999653

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2e-30  Score=206.82  Aligned_cols=211  Identities=24%  Similarity=0.270  Sum_probs=177.6

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHhc----CCccE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSKV----GPVDV   84 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~----g~id~   84 (238)
                      .++++||||+|+||.+++++|++.|++|++++|++++.+++.+..   ..+.++++|+++++++.++++++    +++|+
T Consensus         6 ~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (237)
T PRK07326          6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDV   85 (237)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            478899999999999999999999999999999988776665444   46888999999999998877654    78999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +||++|.....++.+.+.++ ++..+++|+.+++.+++++++.+. ++ .+++|++||..+..+..+...|+.+|+++.+
T Consensus        86 vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~-~~-~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~  162 (237)
T PRK07326         86 LIANAGVGHFAPVEELTPEE-WRLVIDTNLTGAFYTIKAAVPALK-RG-GGYIINISSLAGTNFFAGGAAYNASKFGLVG  162 (237)
T ss_pred             EEECCCCCCCCchhhCCHHH-HHHHHhhccHHHHHHHHHHHHHHH-HC-CeEEEEECChhhccCCCCCchHHHHHHHHHH
Confidence            99999987666677777787 899999999999999999999983 33 5799999999887787888899999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLNW  236 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~~~  236 (238)
                      +++.++.++...|++++.|.||.+.|++...... .+          .....+++|+++.+.++++.....|
T Consensus       163 ~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~-~~----------~~~~~~~~d~a~~~~~~l~~~~~~~  223 (237)
T PRK07326        163 FSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS-EK----------DAWKIQPEDIAQLVLDLLKMPPRTL  223 (237)
T ss_pred             HHHHHHHHhcccCcEEEEEeeccccCcccccccc-hh----------hhccCCHHHHHHHHHHHHhCCcccc
Confidence            9999999999899999999999999987543211 00          0113689999999999998876544

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.97  E-value=1.1e-30  Score=208.94  Aligned_cols=217  Identities=29%  Similarity=0.404  Sum_probs=182.5

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CCcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GPVD   83 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~id   83 (238)
                      .++++||||+|+||.+++++|+++|++|++++|+++..+.+...    ..++.++.+|+++++++.++++++    +++|
T Consensus         5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (246)
T PRK05653          5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALD   84 (246)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            45789999999999999999999999999999998775544332    345788899999999998877653    7899


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++||++|.....+..+.+.++ ++..++.|+.+++.+++++.|.+.+.+ .+++|++||..+..+..+...|+.+|++++
T Consensus        85 ~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~  162 (246)
T PRK05653         85 ILVNNAGITRDALLPRMSEED-WDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTGNPGQTNYSAAKAGVI  162 (246)
T ss_pred             EEEECCCcCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccCCCCCcHhHhHHHHHH
Confidence            999999987666666677777 899999999999999999999997766 579999999988888888899999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .++++++.++.+.|++++.++||.+.+++....  .....+......|.+++.+++|+++.+.|+++..
T Consensus       163 ~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~  229 (246)
T PRK05653        163 GFTKALALELASRGITVNAVAPGFIDTDMTEGL--PEEVKAEILKEIPLGRLGQPEEVANAVAFLASDA  229 (246)
T ss_pred             HHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh--hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            999999999998899999999999999876431  1112222334567788999999999999999764

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.5e-31  Score=214.70  Aligned_cols=210  Identities=18%  Similarity=0.121  Sum_probs=163.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH-hHHHHH----hhCCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA-NLDSLK----QAFPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~----~~~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      ..++++||||+||||++++++|++.|++|++++|+.+ ..+.+.    ....++.++++|+++++++.++++++    ++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            3467899999999999999999999999999998753 333332    22335788999999999998877654    68


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-----ccCCCCchhh
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-----TALEGHTIYS  156 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----~~~~~~~~y~  156 (238)
                      +|++|||||.....   ..   + +...+++|+.+++.+++++.|.+.+   .+++|++||..+.     .+.+....|+
T Consensus        85 ~d~vi~~ag~~~~~---~~---~-~~~~~~vn~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~~~~~~Y~  154 (248)
T PRK07806         85 LDALVLNASGGMES---GM---D-EDYAMRLNRDAQRNLARAALPLMPA---GSRVVFVTSHQAHFIPTVKTMPEYEPVA  154 (248)
T ss_pred             CcEEEECCCCCCCC---CC---C-cceeeEeeeHHHHHHHHHHHhhccC---CceEEEEeCchhhcCccccCCccccHHH
Confidence            99999999865321   11   1 4556789999999999999998853   4699999996543     1234467899


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC--CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS--DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+|++++.+++.++.++++.||++|+|.||++.|++......  .+...  .....|.+++.+|+|+|++++|++++.
T Consensus       155 ~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~dva~~~~~l~~~~  230 (248)
T PRK07806        155 RSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAI--EARREAAGKLYTVSEFAAEVARAVTAP  230 (248)
T ss_pred             HHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHH--HHHHhhhcccCCHHHHHHHHHHHhhcc
Confidence            999999999999999999999999999999999987543211  11111  123467889999999999999999864

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=1.5e-30  Score=209.83  Aligned_cols=216  Identities=20%  Similarity=0.231  Sum_probs=177.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-----CCccEEEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-----GPVDVLIN   87 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-----g~id~li~   87 (238)
                      ++++||||+||||.++++.|+++|++|++++|+.++.+.+.+.  ++..+++|+++.++++++++++     +++|.+||
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSL--GFTGILLDLDDPESVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            4689999999999999999999999999999999887776543  4778999999999988877654     67999999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHH
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITR  167 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~  167 (238)
                      ++|...+.+..+.+.++ +++.+++|+.+++.+++.+++.+.+.+ .+++|++||..+..+.++...|+++|++++.+++
T Consensus        81 ~ag~~~~~~~~~~~~~~-~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~  158 (256)
T PRK08017         81 NAGFGVYGPLSTISRQQ-MEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLISTPGRGAYAASKYALEAWSD  158 (256)
T ss_pred             CCCCCCccchhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccCCCCccHHHHHHHHHHHHHH
Confidence            99987666677777787 899999999999999999999998776 5799999999888888889999999999999999


Q ss_pred             HHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        168 TMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       168 ~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++.++.+.+++++.+.||.++|++....................+.+..++|+++.+..++++.
T Consensus       159 ~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~  223 (256)
T PRK08017        159 ALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESP  223 (256)
T ss_pred             HHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999876542211100000000001123478999999998888764

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.97  E-value=1.7e-30  Score=209.26  Aligned_cols=218  Identities=22%  Similarity=0.257  Sum_probs=179.7

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHhc----CCccE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSKV----GPVDV   84 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~----g~id~   84 (238)
                      ++++||||+|+||++++++|+++|++|++++|+.+..+++.+..    .++.++.+|+++.++++++++.+    +++|+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            46899999999999999999999999999999988766655432    35788999999999998877554    77999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +||++|........+.+.++ ++.++++|+.+++.+++.+++.+.+.+ .+++|++||..+..+.+....|+.+|++++.
T Consensus        82 vi~~a~~~~~~~~~~~~~~~-~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~  159 (255)
T TIGR01963        82 LVNNAGIQHVAPIEEFPPED-WDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVASPFKSAYVAAKHGLIG  159 (255)
T ss_pred             EEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCCCCCchhHHHHHHHHH
Confidence            99999987666666667777 899999999999999999999997765 5799999999888888888999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC----CCc------cCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD----PAK------AGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~----~~~------~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++.++.++.+.+++++.++||.+.|++.......    ...      ...+....+.+.+.+++|+|+++++++++.
T Consensus       160 ~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~  237 (255)
T TIGR01963       160 LTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDA  237 (255)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCcc
Confidence            99999999988899999999999999875321110    000      001223445667899999999999999763

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=9.6e-31  Score=236.98  Aligned_cols=207  Identities=22%  Similarity=0.173  Sum_probs=172.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.+.++++.++    ..++.++++|++|++++++++++    +|++
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  449 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV  449 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            467899999999999999999999999999999999887766543    34588899999999999887765    4889


Q ss_pred             cEEEEccCCCCCCCCCCCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         83 DVLINNAAVARFDRFLDID--EENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      |++|||||........+..  .++ ++.++++|+.+++.+++.++|.|.+++ .|+||++||..+..+.++...|+++|+
T Consensus       450 d~li~~Ag~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  527 (657)
T PRK07201        450 DYLVNNAGRSIRRSVENSTDRFHD-YERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTNAPRFSAYVASKA  527 (657)
T ss_pred             CEEEECCCCCCCCChhhcCCCHHH-HHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCCCCcchHHHHHH
Confidence            9999999986444433322  355 899999999999999999999998776 689999999998888888899999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s  230 (238)
                      ++++++++++.|++++||++|+|+||+++|+|.....   . .       ......+|+++|+.++..+.
T Consensus       528 a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~---~-~-------~~~~~~~~~~~a~~i~~~~~  586 (657)
T PRK07201        528 ALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK---R-Y-------NNVPTISPEEAADMVVRAIV  586 (657)
T ss_pred             HHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc---c-c-------cCCCCCCHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999864311   0 0       11224588888888877653

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.97  E-value=1.8e-30  Score=207.13  Aligned_cols=214  Identities=31%  Similarity=0.455  Sum_probs=177.6

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCCh-HhHHH----HHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ-ANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVL   85 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~----~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~l   85 (238)
                      ++|||++|+||.+++++|+++|++|++++|+. +..+.    +.....++.++++|++|+++++++++.+    +++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            47899999999999999999999999998875 33332    3323335788999999999998887654    789999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      ||++|........+.+.++ +++.+++|+.+.+.+.+.+.+.+.+++ .++++++||..+..+.+....|+.+|++++.+
T Consensus        81 i~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~  158 (239)
T TIGR01830        81 VNNAGITRDNLLMRMKEED-WDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLMGNAGQANYAASKAGVIGF  158 (239)
T ss_pred             EECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCCCCCchhHHHHHHHHHH
Confidence            9999987655556666777 899999999999999999999987655 67999999998888888899999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++.++.++...|++++.+.||+++|++....  .+.....+....|.+++.+++|+++.+++++++.
T Consensus       159 ~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~  223 (239)
T TIGR01830       159 TKSLAKELASRNITVNAVAPGFIDTDMTDKL--SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDE  223 (239)
T ss_pred             HHHHHHHHhhcCeEEEEEEECCCCChhhhhc--ChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcc
Confidence            9999999988899999999999999875432  2222223345567888999999999999999664

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.8e-30  Score=204.53  Aligned_cols=214  Identities=24%  Similarity=0.272  Sum_probs=181.6

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      +++++||||+|+||.++++.|+++ ++|++++|+.+..+++.+..+++.++++|++|+++++++++.++++|++||++|.
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~   81 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAGV   81 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCCc
Confidence            467899999999999999999999 9999999998887777655567889999999999999999988889999999998


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHH
Q psy14567         92 ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMAL  171 (238)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~  171 (238)
                      ....+..+.+.++ +.+++++|+.+++.+.+.+++.+.++  .+++|++||..+..+.++...|+.+|.+++++++.++.
T Consensus        82 ~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~~~~  158 (227)
T PRK08219         82 ADLGPVAESTVDE-WRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSGAGLRANPGWGSYAASKFALRALADALRE  158 (227)
T ss_pred             CCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHHHHH
Confidence            7666666677777 99999999999999999999998765  47999999999888888889999999999999999999


Q ss_pred             HhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccccccc
Q psy14567        172 ELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLNW  236 (238)
Q Consensus       172 ~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~~~  236 (238)
                      ++... ++++.|+||.+++++........      ....+.+++.+++|+++.+++++++..-.+
T Consensus       159 ~~~~~-i~~~~i~pg~~~~~~~~~~~~~~------~~~~~~~~~~~~~dva~~~~~~l~~~~~~~  216 (227)
T PRK08219        159 EEPGN-VRVTSVHPGRTDTDMQRGLVAQE------GGEYDPERYLRPETVAKAVRFAVDAPPDAH  216 (227)
T ss_pred             HhcCC-ceEEEEecCCccchHhhhhhhhh------ccccCCCCCCCHHHHHHHHHHHHcCCCCCc
Confidence            88776 99999999999988654321111      112344678999999999999998754333

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.6e-30  Score=205.23  Aligned_cols=210  Identities=24%  Similarity=0.302  Sum_probs=176.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC--CCceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF--PNVQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      +.++++||||+|+||.+++++|+++|++|++++|+.+...+.....  .....+.+|++|.+++.+++++    ++++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            4568999999999999999999999999999999886644432222  2467788999999999887765    478999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +||++|.....+..+.+.++ +++.+++|+.+++.++++++|.+.+++ .+++|++||..+..+.++...|+.+|++++.
T Consensus        86 vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~  163 (239)
T PRK12828         86 LVNIAGAFVWGTIADGDADT-WDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAGPGMGAYAAAKAGVAR  163 (239)
T ss_pred             EEECCcccCcCChhhCCHHH-HHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCCCCcchhHHHHHHHHH
Confidence            99999987666666677777 899999999999999999999998766 6899999999988888888999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++.++.++.+.|++++.+.||++.|++......          ..++.++.+++|+++++.+++++.
T Consensus       164 ~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~----------~~~~~~~~~~~dva~~~~~~l~~~  221 (239)
T PRK12828        164 LTEALAAELLDRGITVNAVLPSIIDTPPNRADMP----------DADFSRWVTPEQIAAVIAFLLSDE  221 (239)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCcccCcchhhcCC----------chhhhcCCCHHHHHHHHHHHhCcc
Confidence            9999999998889999999999999986432211          112345788999999999999864

>KOG4169|consensus

Probab=99.97  E-value=1.3e-31  Score=202.82  Aligned_cols=176  Identities=26%  Similarity=0.356  Sum_probs=151.6

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHH---HHHhhCC--CceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLD---SLKQAFP--NVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~--~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      .+.++.||+.||||++++++|++.|..+.++..+.++.+   ++.+..|  .+.|++||+++..++++++++    +|.+
T Consensus         5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~i   84 (261)
T KOG4169|consen    5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTI   84 (261)
T ss_pred             CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCce
Confidence            556677999999999999999999998877776666544   4555554  488899999999999888765    4999


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCceEEEEccccccccCCCCchhhHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK--IQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      |++||+||+..        +.+ |++.+++|+.|.+.-+...+|+|.++.  .+|-||++||..|..|.+..+.|++||+
T Consensus        85 DIlINgAGi~~--------dkd-~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKa  155 (261)
T KOG4169|consen   85 DILINGAGILD--------DKD-WERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKA  155 (261)
T ss_pred             EEEEccccccc--------chh-HHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhccc
Confidence            99999999985        233 999999999999999999999998864  5789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHh--CCCCeEEEEEeCCceecCcccCC
Q psy14567        161 ALDSITRTMALEL--GPYNIRVNSVQPTVVMTQMGRTG  196 (238)
Q Consensus       161 al~~l~~~l~~~~--~~~~i~v~~i~PG~v~t~~~~~~  196 (238)
                      ++.+|+|+++...  ...||+++++|||+++|.+....
T Consensus       156 GVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~  193 (261)
T KOG4169|consen  156 GVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENI  193 (261)
T ss_pred             ceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHH
Confidence            9999999998754  45699999999999999986543

>KOG1210|consensus

Probab=99.97  E-value=3.9e-30  Score=203.89  Aligned_cols=181  Identities=23%  Similarity=0.301  Sum_probs=169.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC------CceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP------NVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      +-++|||+|+|||+++|.++..+|++|.++.|+..++.++.++..      ++.+..+|++|.+++...+++.    +++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            677899999999999999999999999999999999988877763      3568889999999999999887    899


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |.+|+|||..-++.+.+.+.++ ++..+++|+.++++++++.++.|++....|+|+.+||..+..+..++.+|+++|+|+
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~-v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al  192 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEV-VEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL  192 (331)
T ss_pred             ceEEEecCcccccccccCCHHH-HHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence            9999999999889999999998 999999999999999999999999887667999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGR  194 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~  194 (238)
                      .+|+..+++|+.++||+|...+|+.++||-.+
T Consensus       193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE  224 (331)
T KOG1210|consen  193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFE  224 (331)
T ss_pred             HHHHHHHHHHHhhcceEEEEEcCCCCCCCccc
Confidence            99999999999999999999999999999654

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=2.2e-29  Score=200.89  Aligned_cols=180  Identities=28%  Similarity=0.342  Sum_probs=161.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.++++||||+|+||+++|++|+++|+ +|++++|+.++.++   ...++.++.+|++++++++++++.++++|++||++
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~a   81 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNA   81 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECC
Confidence            456789999999999999999999999 99999999877654   33468889999999999999999988999999999


Q ss_pred             CC-CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHH
Q psy14567         90 AV-ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRT  168 (238)
Q Consensus        90 g~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~  168 (238)
                      |. ....++.+.+.++ +.+.+++|+.+++.+.+++.|.+.+.+ .++++++||..+..+.++...|+.+|++++.+++.
T Consensus        82 g~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~  159 (238)
T PRK08264         82 GIFRTGSLLLEGDEDA-LRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQA  159 (238)
T ss_pred             CcCCCCCccccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHH
Confidence            98 4455666777777 999999999999999999999998766 68999999998888888889999999999999999


Q ss_pred             HHHHhCCCCeEEEEEeCCceecCcccC
Q psy14567        169 MALELGPYNIRVNSVQPTVVMTQMGRT  195 (238)
Q Consensus       169 l~~~~~~~~i~v~~i~PG~v~t~~~~~  195 (238)
                      ++.++.+.|++++.+.||.++|++...
T Consensus       160 l~~~~~~~~i~~~~v~pg~v~t~~~~~  186 (238)
T PRK08264        160 LRAELAPQGTRVLGVHPGPIDTDMAAG  186 (238)
T ss_pred             HHHHhhhcCeEEEEEeCCccccccccc
Confidence            999999999999999999999998543

>KOG1014|consensus

Probab=99.97  E-value=9.6e-31  Score=207.69  Aligned_cols=187  Identities=27%  Similarity=0.394  Sum_probs=163.3

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-----CceEEEeecCCHHHH-HHHHHhc-
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----NVQTVQVDLQDWART-RAAVSKV-   79 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v-~~~~~~~-   79 (238)
                      +..+-..=++|||||-|||++.|++||++|.+|++++|++++++.+.++..     .+.++.+|+++.+++ +++.+.+ 
T Consensus        44 ~~~~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~  123 (312)
T KOG1014|consen   44 LKEKLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLA  123 (312)
T ss_pred             hHHhcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhc
Confidence            333334667899999999999999999999999999999999988877663     378889999998763 3333333 


Q ss_pred             -CCccEEEEccCCCC--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         80 -GPVDVLINNAAVAR--FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        80 -g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                       .++-++|||+|...  +..+.+.+.+. +++++.+|+.+...+++..+|.|.+++ +|-||++||.++..+.|....|+
T Consensus       124 ~~~VgILVNNvG~~~~~P~~f~~~~~~~-~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~p~p~~s~ys  201 (312)
T KOG1014|consen  124 GLDVGILVNNVGMSYDYPESFLKYPEGE-LQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLIPTPLLSVYS  201 (312)
T ss_pred             CCceEEEEecccccCCCcHHHHhCchhh-hhheeEEecchHHHHHHHhhhhhhcCC-CceEEEeccccccccChhHHHHH
Confidence             36899999999876  56677777665 899999999999999999999999877 89999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccC
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT  195 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~  195 (238)
                      ++|+.++.|+++|+.|++++||.|.++.|++|.|+|...
T Consensus       202 asK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~  240 (312)
T KOG1014|consen  202 ASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKY  240 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccccc
Confidence            999999999999999999999999999999999999754

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.5e-29  Score=202.82  Aligned_cols=178  Identities=27%  Similarity=0.356  Sum_probs=158.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      ++++||||+||||++++++|++.|++|++++|+.+..+++...    ..++.++.+|++|++++.++++  +++|++|||
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~id~vi~~   80 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE--WDVDVLLNN   80 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc--CCCCEEEEC
Confidence            4689999999999999999999999999999998776655433    2357889999999999888765  379999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRT  168 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~  168 (238)
                      ||.....+..+.+.++ ++..+++|+.+++.+++.+++.+.+++ .++||++||..+..+.++...|+++|++++.+++.
T Consensus        81 ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~  158 (257)
T PRK09291         81 AGIGEAGAVVDIPVEL-VRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEA  158 (257)
T ss_pred             CCcCCCcCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCCCCcchhHHHHHHHHHHHHH
Confidence            9998777778888887 999999999999999999999998877 58999999998888888889999999999999999


Q ss_pred             HHHHhCCCCeEEEEEeCCceecCccc
Q psy14567        169 MALELGPYNIRVNSVQPTVVMTQMGR  194 (238)
Q Consensus       169 l~~~~~~~~i~v~~i~PG~v~t~~~~  194 (238)
                      ++.++.+.||+++.|+||++.|++..
T Consensus       159 l~~~~~~~gi~~~~v~pg~~~t~~~~  184 (257)
T PRK09291        159 MHAELKPFGIQVATVNPGPYLTGFND  184 (257)
T ss_pred             HHHHHHhcCcEEEEEecCcccccchh
Confidence            99999999999999999999998754

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.97  E-value=1.9e-30  Score=207.63  Aligned_cols=186  Identities=27%  Similarity=0.245  Sum_probs=152.0

Q ss_pred             HHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEEccCCCCCCCCCCCChHHHH
Q psy14567         28 IVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLINNAAVARFDRFLDIDEENLI  106 (238)
Q Consensus        28 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~  106 (238)
                      +|++|+++|++|++++|+.++.+.       ..++++|++|.++++++++++ +++|++|||||....        .+ +
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~-------~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~--------~~-~   64 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL-------DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT--------AP-V   64 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh-------hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC--------CC-H
Confidence            478999999999999999876421       246789999999999999876 689999999997631        23 7


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc---------------------------cCCCCchhhHHH
Q psy14567        107 DSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT---------------------------ALEGHTIYSASK  159 (238)
Q Consensus       107 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------------------~~~~~~~y~~sK  159 (238)
                      +..+++|+.+++.+++.++|.|.+   .|+||++||..+..                           +.++...|++||
T Consensus        65 ~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  141 (241)
T PRK12428         65 ELVARVNFLGLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSK  141 (241)
T ss_pred             HHhhhhchHHHHHHHHHHHHhccC---CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHH
Confidence            888999999999999999999854   47999999988752                           455678999999


Q ss_pred             HHHHHHHHHHH-HHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMA-LELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~-~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++.++ .+++++||+||+|+||+++|+|..................|++|+.+|+|+|+++.||+++.
T Consensus       142 ~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~  215 (241)
T PRK12428        142 EALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDA  215 (241)
T ss_pred             HHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChh
Confidence            99999999999 99999999999999999999997543211100001113468899999999999999999864

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=1.7e-29  Score=190.92  Aligned_cols=155  Identities=34%  Similarity=0.496  Sum_probs=137.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCC--hHhHHHH----HhhCCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKT--QANLDSL----KQAFPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~--~~~~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      ++++||||++|||++++++|+++|. +|++++|+  .+..+++    .....++.++++|++++++++++++++    ++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4688999999999999999999966 78889999  5555544    333456899999999999999888765    79


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||+|.....++.+.+.++ |++++++|+.+++.+.+.++|    ++ .|+||++||..+..+.++..+|+++|+|
T Consensus        81 ld~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~----~~-~g~iv~~sS~~~~~~~~~~~~Y~askaa  154 (167)
T PF00106_consen   81 LDILINNAGIFSDGSLDDLSEEE-LERVFRVNLFGPFLLAKALLP----QG-GGKIVNISSIAGVRGSPGMSAYSASKAA  154 (167)
T ss_dssp             ESEEEEECSCTTSBSGGGSHHHH-HHHHHHHHTHHHHHHHHHHHH----HT-TEEEEEEEEGGGTSSSTTBHHHHHHHHH
T ss_pred             ccccccccccccccccccccchh-hhhccccccceeeeeeehhee----cc-ccceEEecchhhccCCCCChhHHHHHHH
Confidence            99999999999878888887777 999999999999999999999    33 6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHh
Q psy14567        162 LDSITRTMALEL  173 (238)
Q Consensus       162 l~~l~~~l~~~~  173 (238)
                      +++|+++++.|+
T Consensus       155 l~~~~~~la~e~  166 (167)
T PF00106_consen  155 LRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc
Confidence            999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.1e-29  Score=199.07  Aligned_cols=193  Identities=12%  Similarity=0.086  Sum_probs=146.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH-hHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA-NLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.. ..+. .... ....+.+|+++.+++.+.   ++++|++||||
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~-~~~~-~~~~~~~D~~~~~~~~~~---~~~iDilVnnA   87 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES-NDES-PNEWIKWECGKEESLDKQ---LASLDVLILNH   87 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh-hccC-CCeEEEeeCCCHHHHHHh---cCCCCEEEECC
Confidence            3468899999999999999999999999999999873 3222 1111 235789999999887654   56799999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCceEEEEccccccccCCCCchhhHHHHHHHHHH-
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK--IQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT-  166 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~-  166 (238)
                      |+...   .+.+.++ |++++++|+.+++.++++++|.|.+++  .++.++..+|..+..+ +....|++||+|+..+. 
T Consensus        88 G~~~~---~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aSKaal~~~~~  162 (245)
T PRK12367         88 GINPG---GRQDPEN-INKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEISKRLIGQLVS  162 (245)
T ss_pred             ccCCc---CCCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHHHHHHHHHHH
Confidence            97532   3455666 999999999999999999999997632  1233444455554433 45678999999986543 


Q ss_pred             --HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        167 --RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       167 --~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                        +.++.++...+++++.+.||+++|++..                  .+..+|+|+|+.+++.+++
T Consensus       163 l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~------------------~~~~~~~~vA~~i~~~~~~  211 (245)
T PRK12367        163 LKKNLLDKNERKKLIIRKLILGPFRSELNP------------------IGIMSADFVAKQILDQANL  211 (245)
T ss_pred             HHHHHHHhhcccccEEEEecCCCcccccCc------------------cCCCCHHHHHHHHHHHHhc
Confidence              4455566788999999999999998731                  1245889999998888866

>KOG1199|consensus

Probab=99.96  E-value=9.1e-32  Score=195.55  Aligned_cols=220  Identities=23%  Similarity=0.299  Sum_probs=180.4

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHH----hcCCc
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVS----KVGPV   82 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~----~~g~i   82 (238)
                      ...+..|.++|||.+|+|++.+++|+..|+.|++.+-.+++-++..++.+ ++.|.+.|++++++++.++.    ++|++
T Consensus         5 rs~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrl   84 (260)
T KOG1199|consen    5 RSTKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRL   84 (260)
T ss_pred             hhhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccce
Confidence            33466788999999999999999999999999999988887766666654 58899999999999988874    56999


Q ss_pred             cEEEEccCCCCC------CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCceEEEEccccccccCCC
Q psy14567         83 DVLINNAAVARF------DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK-----IQGSIVNVSSIAGKTALEG  151 (238)
Q Consensus        83 d~li~~ag~~~~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~  151 (238)
                      |.++||||+...      ++-...+.++ |++.+++|+.++|++++.-.-.|-.++     ..|.||+..|.++..+..+
T Consensus        85 d~~vncagia~a~ktyn~~k~~~h~led-fqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~g  163 (260)
T KOG1199|consen   85 DALVNCAGIAYAFKTYNVQKKKHHDLED-FQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTG  163 (260)
T ss_pred             eeeeeccceeeeeeeeeecccccccHHH-hhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccc
Confidence            999999997532      3344567788 999999999999999999888886643     2578999999999999999


Q ss_pred             CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCC-cccCCC-CCCcCCCCCccccccccc
Q psy14567        152 HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGP-MLAKTP-LGRFAGKLKPKPWNRWLL  229 (238)
Q Consensus       152 ~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~-~~~~~~-~~r~~~~~~ia~~~~~l~  229 (238)
                      +.+|++||.++.+|+.-++++++..|||++.|.||.++||+....   +|.... +.+..| -.|++.|.|.+..+-...
T Consensus       164 qaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllssl---pekv~~fla~~ipfpsrlg~p~eyahlvqaii  240 (260)
T KOG1199|consen  164 QAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSL---PEKVKSFLAQLIPFPSRLGHPHEYAHLVQAII  240 (260)
T ss_pred             hhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhh---hHHHHHHHHHhCCCchhcCChHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999997652   222222 223334 347888988887665544


Q ss_pred             cc
Q psy14567        230 PS  231 (238)
Q Consensus       230 s~  231 (238)
                      .+
T Consensus       241 en  242 (260)
T KOG1199|consen  241 EN  242 (260)
T ss_pred             hC
Confidence            43

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.7e-28  Score=190.98  Aligned_cols=177  Identities=23%  Similarity=0.253  Sum_probs=149.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNA   89 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~a   89 (238)
                      +++++||||+|+||++++++|++.|++|++++|+.+..+++...  +..++++|+++.++++++++++  +++|++|||+
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~a   78 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQAL--GAEALALDVADPASVAGLAWKLDGEALDAAVYVA   78 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhc--cceEEEecCCCHHHHHHHHHHhcCCCCCEEEECC
Confidence            35788999999999999999999999999999998887776643  4668999999999999988766  3699999999


Q ss_pred             CCCCC--CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCC---chhhHHHHHHHH
Q psy14567         90 AVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGH---TIYSASKAALDS  164 (238)
Q Consensus        90 g~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~---~~y~~sK~al~~  164 (238)
                      |....  .+..+.+.++ ++..+++|+.+++.+++++.|.+.++  .+++++++|..+..+....   ..|+.+|+++++
T Consensus        79 g~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~  155 (222)
T PRK06953         79 GVYGPRTEGVEPITRED-FDAVMHTNVLGPMQLLPILLPLVEAA--GGVLAVLSSRMGSIGDATGTTGWLYRASKAALND  155 (222)
T ss_pred             CcccCCCCCcccCCHHH-HHHHHhhhhhhHHHHHHHHHHhhhcc--CCeEEEEcCcccccccccCCCccccHHhHHHHHH
Confidence            98632  3445567777 99999999999999999999988653  4789999998776553322   369999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccC
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRT  195 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~  195 (238)
                      +++.++.++.  ++++|.|+||+++|++.+.
T Consensus       156 ~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~  184 (222)
T PRK06953        156 ALRAASLQAR--HATCIALHPGWVRTDMGGA  184 (222)
T ss_pred             HHHHHhhhcc--CcEEEEECCCeeecCCCCC
Confidence            9999998864  6999999999999998653

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.96  E-value=2.7e-28  Score=194.59  Aligned_cols=208  Identities=20%  Similarity=0.204  Sum_probs=167.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      +.++++||||+||||.++++.|++.|++|++++|+.+..+.+.+..   .++.++++|+++++++++++++    ++++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            3467899999999999999999999999999999998776664332   3578899999999999887765    37799


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-cCCCCchhhHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-ALEGHTIYSASKAAL  162 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~~~y~~sK~al  162 (238)
                      .+|+++|.....+..+  .++ ++.++++|+.+++.+.+.++|.+.+   .+++|++||..+.. +.+....|+.+|+++
T Consensus        84 ~ii~~ag~~~~~~~~~--~~~-~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~  157 (238)
T PRK05786         84 GLVVTVGGYVEDTVEE--FSG-LEEMLTNHIKIPLYAVNASLRFLKE---GSSIVLVSSMSGIYKASPDQLSYAVAKAGL  157 (238)
T ss_pred             EEEEcCCCcCCCchHH--HHH-HHHHHHHhchHHHHHHHHHHHHHhc---CCEEEEEecchhcccCCCCchHHHHHHHHH
Confidence            9999998764433322  355 8999999999999999999999854   47899999987643 456678899999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCC-CCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPL-GRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.++++++.++.+.||+++.|.||++.|++....    . ...   ..+. .+..+++|+++.+.+++++.
T Consensus       158 ~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~----~-~~~---~~~~~~~~~~~~~va~~~~~~~~~~  220 (238)
T PRK05786        158 AKAVEILASELLGRGIRVNGIAPTTISGDFEPER----N-WKK---LRKLGDDMAPPEDFAKVIIWLLTDE  220 (238)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh----h-hhh---hccccCCCCCHHHHHHHHHHHhccc
Confidence            9999999999999999999999999999874220    1 010   1111 24678999999999999874

>KOG1204|consensus

Probab=99.94  E-value=2.5e-28  Score=185.08  Aligned_cols=221  Identities=22%  Similarity=0.185  Sum_probs=165.6

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh--HHHHHhhCC-CceEEEeecCCHHHHHHHH----HhcCC
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN--LDSLKQAFP-NVQTVQVDLQDWARTRAAV----SKVGP   81 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~-~~~~~~~D~~~~~~v~~~~----~~~g~   81 (238)
                      .+..+++++||+|+|||..++..+.+++.......+++..  .+.+.-..+ .......|.+...-+.++.    ++.|+
T Consensus         3 ~~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gk   82 (253)
T KOG1204|consen    3 LNMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGK   82 (253)
T ss_pred             cccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence            4566788999999999999999988887755544444433  222222111 1222234444433334443    33478


Q ss_pred             ccEEEEccCCCCCCCCC---CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHH
Q psy14567         82 VDVLINNAAVARFDRFL---DIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        82 id~li~~ag~~~~~~~~---~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      .|++|||||...+-...   ..+.++ |++.++.|+++++.+.+.++|.++++...+.+|++||.++..++...++||++
T Consensus        83 r~iiI~NAG~lgdvsk~~~~~~D~~q-w~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~  161 (253)
T KOG1204|consen   83 RDIIIHNAGSLGDVSKGAVDLGDSDQ-WKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSS  161 (253)
T ss_pred             eeEEEecCCCccchhhccCCcccHHH-HHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhh
Confidence            99999999987653222   344455 99999999999999999999999887446899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC----CCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS----DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      |+|.+++++.++.|=. ++|++.++.||.+||+|+.....    .++..+.+.+....+++.+|...|+.+..|+..
T Consensus       162 KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~  237 (253)
T KOG1204|consen  162 KAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEK  237 (253)
T ss_pred             HHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHh
Confidence            9999999999998765 79999999999999999865322    234444555666778899999999998887654

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.94  E-value=1.7e-25  Score=189.47  Aligned_cols=192  Identities=17%  Similarity=0.124  Sum_probs=147.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh-hCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ-AFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.+++++... ....+..+.+|++|++++.+.+   +++|++||||
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l---~~IDiLInnA  253 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELL---EKVDILIINH  253 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHh---CCCCEEEECC
Confidence            45688999999999999999999999999999998876644322 2224667899999998877655   4799999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI---QGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      |....   .+.+.++ +++++++|+.+++.++++++|.|++++.   ++.++++|+ + ....+....|++||+|+.+++
T Consensus       254 Gi~~~---~~~s~e~-~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a-~~~~~~~~~Y~ASKaAl~~l~  327 (406)
T PRK07424        254 GINVH---GERTPEA-INKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-A-EVNPAFSPLYELSKRALGDLV  327 (406)
T ss_pred             CcCCC---CCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-c-cccCCCchHHHHHHHHHHHHH
Confidence            97643   2556676 9999999999999999999999987642   234566654 3 334345578999999999997


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      . +..+.  .++.+..+.||+++|++..                 .+ ..+|+++|+.+.+.+++.
T Consensus       328 ~-l~~~~--~~~~I~~i~~gp~~t~~~~-----------------~~-~~spe~vA~~il~~i~~~  372 (406)
T PRK07424        328 T-LRRLD--APCVVRKLILGPFKSNLNP-----------------IG-VMSADWVAKQILKLAKRD  372 (406)
T ss_pred             H-HHHhC--CCCceEEEEeCCCcCCCCc-----------------CC-CCCHHHHHHHHHHHHHCC
Confidence            4 44432  3577778899999888631                 11 358999999999888763

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.92  E-value=4.5e-24  Score=210.85  Aligned_cols=176  Identities=15%  Similarity=0.112  Sum_probs=151.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhC-CCEEEEecCCh-------------------------------------------
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQ-------------------------------------------   46 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~-------------------------------------------   46 (238)
                      +.++++||||++|||.++|++|+++ |++|++++|+.                                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5679999999999999999999988 69999999982                                           


Q ss_pred             ----H----hHHHHHhhCCCceEEEeecCCHHHHHHHHHhc---CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHH
Q psy14567         47 ----A----NLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV---GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIK  115 (238)
Q Consensus        47 ----~----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~---g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~  115 (238)
                          .    .++.+.+....+.++.||++|.++++++++++   +++|+||||||+.....+.+.+.++ |++++++|+.
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~-f~~v~~~nv~ 2154 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEE-FNAVYGTKVD 2154 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHH-HHHHHHHHHH
Confidence                0    01122223345788999999999999888765   5799999999998878888888898 9999999999


Q ss_pred             HHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCccc
Q psy14567        116 AVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR  194 (238)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~  194 (238)
                      +.+.+++++.+.+     .++||++||+.+..+.++...|+++|++++.+++.++.++..  +||++|+||+++|+|..
T Consensus      2155 G~~~Ll~al~~~~-----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~--irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2155 GLLSLLAALNAEN-----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPS--AKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHhC-----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCC--cEEEEEECCeecCCccc
Confidence            9999999887643     358999999999999999999999999999999999998754  89999999999999853

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.91  E-value=1.1e-23  Score=182.74  Aligned_cols=207  Identities=14%  Similarity=0.103  Sum_probs=157.0

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-------------CCceEEEeecCCHHHHH
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-------------PNVQTVQVDLQDWARTR   73 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~D~~~~~~v~   73 (238)
                      +.-+..++++||||+||||++++++|++.|++|++++|+.++++.+.+..             .++.++.+|++|.+++.
T Consensus        75 ~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~  154 (576)
T PLN03209         75 LDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIG  154 (576)
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHH
Confidence            33446678999999999999999999999999999999998876654321             24778999999998877


Q ss_pred             HHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-ccCCCC
Q psy14567         74 AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-TALEGH  152 (238)
Q Consensus        74 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~  152 (238)
                      +.+   +++|+||||+|....      ...+ +...+++|+.+..++++++.+.    + .++||++||..+. .+.+. 
T Consensus       155 ~aL---ggiDiVVn~AG~~~~------~v~d-~~~~~~VN~~Gt~nLl~Aa~~a----g-VgRIV~VSSiga~~~g~p~-  218 (576)
T PLN03209        155 PAL---GNASVVICCIGASEK------EVFD-VTGPYRIDYLATKNLVDAATVA----K-VNHFILVTSLGTNKVGFPA-  218 (576)
T ss_pred             HHh---cCCCEEEEccccccc------cccc-hhhHHHHHHHHHHHHHHHHHHh----C-CCEEEEEccchhcccCccc-
Confidence            654   468999999997532      1123 6777899999999999988643    3 4799999998763 23222 


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ..|. +|.++..+.+.+..++...||+++.|+||++.|++....  ............+++|.++.+|+|+.++|++++.
T Consensus       219 ~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~--~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~  295 (576)
T PLN03209        219 AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK--ETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNR  295 (576)
T ss_pred             cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc--cccceeeccccccCCCccCHHHHHHHHHHHHcCc
Confidence            1243 788888888888888888899999999999998864321  1111111223367788999999999999999964

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.90  E-value=9.2e-23  Score=154.80  Aligned_cols=166  Identities=20%  Similarity=0.236  Sum_probs=137.2

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhH-------HHHHhhCCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANL-------DSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~-------~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      +++||||+||||.+++++|+++|+ .|++++|+.+..       +++.....++.++++|++++++++++++++    ++
T Consensus         2 ~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (180)
T smart00822        2 TYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLGP   81 (180)
T ss_pred             EEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            568899999999999999999997 688888875432       333333446778999999999988877654    78


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|.+||++|.....+..+.+.++ ++.++++|+.+++.+.+++.+    .+ .++++++||..+..+.++...|+++|++
T Consensus        82 id~li~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~----~~-~~~ii~~ss~~~~~~~~~~~~y~~sk~~  155 (180)
T smart00822       82 LRGVIHAAGVLDDGLLANLTPER-FAAVLAPKVDGAWNLHELTRD----LP-LDFFVLFSSVAGVLGNPGQANYAAANAF  155 (180)
T ss_pred             eeEEEEccccCCccccccCCHHH-HHHhhchHhHHHHHHHHHhcc----CC-cceEEEEccHHHhcCCCCchhhHHHHHH
Confidence            99999999987666667777777 899999999999999998843    23 5799999999988888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCcee
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVM  189 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~  189 (238)
                      ++.+++.++.    .|+++..+.||+++
T Consensus       156 ~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      156 LDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHh----cCCceEEEeecccc
Confidence            9999977643    57889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.88  E-value=4.1e-21  Score=160.11  Aligned_cols=165  Identities=18%  Similarity=0.180  Sum_probs=132.9

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCC--CEEEEecCChHhHHHHHhhC--CCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANLDSLKQAF--PNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      .++++||||+|+||++++++|+++|  ++|++++|+.....++.+..  +++.++.+|++|++++.++++   .+|++||
T Consensus         4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~---~iD~Vih   80 (324)
T TIGR03589         4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR---GVDYVVH   80 (324)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh---cCCEEEE
Confidence            4568999999999999999999986  68999999876655554433  357889999999999988876   4899999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHH
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITR  167 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~  167 (238)
                      +||.... +..+.+    ....+++|+.++.++++++.+.    + .+++|++||.....   +...|+++|++.+.+++
T Consensus        81 ~Ag~~~~-~~~~~~----~~~~~~~Nv~g~~~ll~aa~~~----~-~~~iV~~SS~~~~~---p~~~Y~~sK~~~E~l~~  147 (324)
T TIGR03589        81 AAALKQV-PAAEYN----PFECIRTNINGAQNVIDAAIDN----G-VKRVVALSTDKAAN---PINLYGATKLASDKLFV  147 (324)
T ss_pred             CcccCCC-chhhcC----HHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEeCCCCCC---CCCHHHHHHHHHHHHHH
Confidence            9997532 222222    3457899999999999998752    2 46999999875433   35689999999999999


Q ss_pred             HHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        168 TMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       168 ~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      .++.+....|++++++.||.+..+.
T Consensus       148 ~~~~~~~~~gi~~~~lR~g~v~G~~  172 (324)
T TIGR03589       148 AANNISGSKGTRFSVVRYGNVVGSR  172 (324)
T ss_pred             HHHhhccccCcEEEEEeecceeCCC
Confidence            9988888889999999999999863

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1478|consensus

Probab=99.87  E-value=1.3e-21  Score=150.68  Aligned_cols=182  Identities=18%  Similarity=0.239  Sum_probs=150.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC-----EEEEecCChHhHHHHHhhC----C----CceEEEeecCCHHHHHHHHH-
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA-----IIIALSKTQANLDSLKQAF----P----NVQTVQVDLQDWARTRAAVS-   77 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~-----~V~~~~r~~~~~~~~~~~~----~----~~~~~~~D~~~~~~v~~~~~-   77 (238)
                      .+|++|||++||||.++|.+|.+...     ++++++|+.++++++.+..    +    +++++.+|+++..++.++.+ 
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            46889999999999999999987643     5788899999988765544    3    48889999999999877764 


Q ss_pred             ---hcCCccEEEEccCCCCCCCCC---------------------------CCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14567         78 ---KVGPVDVLINNAAVARFDRFL---------------------------DIDEENLIDSIFDVNIKAVINISQVVSKT  127 (238)
Q Consensus        78 ---~~g~id~li~~ag~~~~~~~~---------------------------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  127 (238)
                         ++.++|.+..|||+.....+.                           ..+.++ +..+++.|+.|++.+.+.+.|+
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~-lg~iFetnVFGhfyli~~l~pl  161 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADG-LGEIFETNVFGHFYLIRELEPL  161 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccc-hhhHhhhcccchhhhHhhhhhH
Confidence               457899999999987542221                           112344 7889999999999999999999


Q ss_pred             HHhccCCceEEEEcccccccc---------CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccC
Q psy14567        128 MIDHKIQGSIVNVSSIAGKTA---------LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT  195 (238)
Q Consensus       128 ~~~~~~~g~iv~isS~~~~~~---------~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~  195 (238)
                      +..+. ...+|++||..+...         ..+..+|..||.+.+-+.-.+-+.+.+.|+-.+.++||+.-|.+...
T Consensus       162 l~~~~-~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~  237 (341)
T KOG1478|consen  162 LCHSD-NPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSE  237 (341)
T ss_pred             hhcCC-CCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhh
Confidence            98776 459999999988542         35678999999999999999999999999999999999999988654

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.85  E-value=8.1e-21  Score=158.40  Aligned_cols=206  Identities=16%  Similarity=0.110  Sum_probs=147.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh------CCCceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA------FPNVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      +.++++||||+|+||++++++|++.|++|++++|+.+..+.....      .+++.++.+|++++++++++++   ++|+
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~   80 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID---GCET   80 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc---CCCE
Confidence            356889999999999999999999999999888886644332211      1357889999999999888887   4899


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCC--------------
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALE--------------  150 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--------------  150 (238)
                      +||+||....    ..+.++ +...+++|+.+++.+++++.+.+   + .++||++||..+..+..              
T Consensus        81 vih~A~~~~~----~~~~~~-~~~~~~~n~~g~~~ll~a~~~~~---~-~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~  151 (325)
T PLN02989         81 VFHTASPVAI----TVKTDP-QVELINPAVNGTINVLRTCTKVS---S-VKRVILTSSMAAVLAPETKLGPNDVVDETFF  151 (325)
T ss_pred             EEEeCCCCCC----CCCCCh-HHHHHHHHHHHHHHHHHHHHHcC---C-ceEEEEecchhheecCCccCCCCCccCcCCC
Confidence            9999996532    222333 67789999999999999987753   1 36999999976532210              


Q ss_pred             --------CCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-CCccCCc-ccCCC----CCCcC
Q psy14567        151 --------GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-PAKAGPM-LAKTP----LGRFA  216 (238)
Q Consensus       151 --------~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-~~~~~~~-~~~~~----~~r~~  216 (238)
                              ....|+.+|.+.+.+++.++.++   |+.++.+.|+.+..|........ ....... ....+    .+.+.
T Consensus       152 ~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i  228 (325)
T PLN02989        152 TNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFV  228 (325)
T ss_pred             CchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCee
Confidence                    02469999999999998887654   78999999999999865321100 0000000 01112    24577


Q ss_pred             CCCCccccccccccc
Q psy14567        217 GKLKPKPWNRWLLPS  231 (238)
Q Consensus       217 ~~~~ia~~~~~l~s~  231 (238)
                      ..+|+|++++.++..
T Consensus       229 ~v~Dva~a~~~~l~~  243 (325)
T PLN02989        229 DVRDVALAHVKALET  243 (325)
T ss_pred             EHHHHHHHHHHHhcC
Confidence            789999998877654

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.85  E-value=3.2e-20  Score=142.08  Aligned_cols=165  Identities=22%  Similarity=0.289  Sum_probs=126.6

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC-EEEEecCCh-------HhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQ-------ANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~-------~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      +++||||.||||..+++.|+++|. +|++++|+.       ..++++.+....+.+++||++|+++++++++++    ++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            568999999999999999999987 899999992       235566666667999999999999999999776    68


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      ++.+||+||......+.+.+.++ ++..+...+.+...+.+.+.+    .+ -..+|..||+++..+.++...|+++.+.
T Consensus        82 i~gVih~ag~~~~~~~~~~t~~~-~~~~~~~Kv~g~~~L~~~~~~----~~-l~~~i~~SSis~~~G~~gq~~YaaAN~~  155 (181)
T PF08659_consen   82 IDGVIHAAGVLADAPIQDQTPDE-FDAVLAPKVRGLWNLHEALEN----RP-LDFFILFSSISSLLGGPGQSAYAAANAF  155 (181)
T ss_dssp             EEEEEE-------B-GCC--HHH-HHHHHHHHHHHHHHHHHHHTT----TT-TSEEEEEEEHHHHTT-TTBHHHHHHHHH
T ss_pred             cceeeeeeeeecccccccCCHHH-HHHHHhhhhhHHHHHHHHhhc----CC-CCeEEEECChhHhccCcchHhHHHHHHH
Confidence            99999999998888888889888 999999999999999888754    22 4689999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCce
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVV  188 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v  188 (238)
                      ++.+++.....    |.++.+|+-|..
T Consensus       156 lda~a~~~~~~----g~~~~sI~wg~W  178 (181)
T PF08659_consen  156 LDALARQRRSR----GLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHHHHT----TSEEEEEEE-EB
T ss_pred             HHHHHHHHHhC----CCCEEEEEcccc
Confidence            99999876543    566777776654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.84  E-value=6.8e-20  Score=154.31  Aligned_cols=170  Identities=18%  Similarity=0.139  Sum_probs=132.3

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh---hCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ---AFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.++||||+|+||+++++.|+++|++|++++|+.........   ...++.++.+|+++.+++.++++.. ++|++||+|
T Consensus         5 k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~vih~A   83 (349)
T TIGR02622         5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-KPEIVFHLA   83 (349)
T ss_pred             CEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-CCCEEEECC
Confidence            468999999999999999999999999999988765333221   1235778899999999999998876 589999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc------------ccCCCCchhhH
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK------------TALEGHTIYSA  157 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~~~~~y~~  157 (238)
                      |....    ....++ +...+++|+.+++.+++++.+.   .. .+++|++||....            .+..+...|+.
T Consensus        84 ~~~~~----~~~~~~-~~~~~~~N~~g~~~ll~a~~~~---~~-~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~  154 (349)
T TIGR02622        84 AQPLV----RKSYAD-PLETFETNVMGTVNLLEAIRAI---GS-VKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSS  154 (349)
T ss_pred             ccccc----ccchhC-HHHHHHHhHHHHHHHHHHHHhc---CC-CCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchh
Confidence            95422    222333 5677899999999999987431   11 3589999985421            12345678999


Q ss_pred             HHHHHHHHHHHHHHHhCC----CCeEEEEEeCCceecCc
Q psy14567        158 SKAALDSITRTMALELGP----YNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~----~~i~v~~i~PG~v~t~~  192 (238)
                      +|.+.+.+++.++.++.+    ++++++.+.|+.+..|-
T Consensus       155 sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       155 SKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             HHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence            999999999999888754    48999999999998874

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.82  E-value=4.9e-19  Score=146.89  Aligned_cols=178  Identities=16%  Similarity=0.099  Sum_probs=130.5

Q ss_pred             CcCCCCCCCCCCchHHH--HHHHHhhCCCEEEEecCChH---------------hHHHHHhhC-CCceEEEeecCCHHHH
Q psy14567         11 RTNTKGGDYPKPGIGRC--IVEKLSQHEAIIIALSKTQA---------------NLDSLKQAF-PNVQTVQVDLQDWART   72 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~--ia~~l~~~G~~V~~~~r~~~---------------~~~~~~~~~-~~~~~~~~D~~~~~~v   72 (238)
                      ..++++|||+++|||.+  +|+.| ++|++|+++++..+               ..++..+.. .....++||+++++++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            35789999999999999  89999 99999888874321               123333332 3467889999999999


Q ss_pred             HHHHHh----cCCccEEEEccCCCCCCC-----------------C----CC-------------CChHHHHHHHHHHHH
Q psy14567         73 RAAVSK----VGPVDVLINNAAVARFDR-----------------F----LD-------------IDEENLIDSIFDVNI  114 (238)
Q Consensus        73 ~~~~~~----~g~id~li~~ag~~~~~~-----------------~----~~-------------~~~~~~~~~~~~~n~  114 (238)
                      ++++++    +|++|+||||+|......                 +    .+             .+.++ ++..  +++
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~e-i~~T--v~v  195 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEE-IADT--VKV  195 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHH-HHHH--HHh
Confidence            888755    489999999999763211                 1    11             11122 3332  333


Q ss_pred             HHH-----HHHHHHHHHHHHhccCCceEEEEccccccccCCCC--chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCc
Q psy14567        115 KAV-----INISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGH--TIYSASKAALDSITRTMALELGPYNIRVNSVQPTV  187 (238)
Q Consensus       115 ~~~-----~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~  187 (238)
                      .|.     |.-.+...+.|.+   +++++..|.+.+....|.+  ..-+.+|++|+.-++.|+.++++.|+|+|++.+|.
T Consensus       196 Mggedw~~Wi~al~~a~lla~---g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~  272 (398)
T PRK13656        196 MGGEDWELWIDALDEAGVLAE---GAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKA  272 (398)
T ss_pred             hccchHHHHHHHHHhcccccC---CcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCc
Confidence            333     2234445555533   5899999999988887776  48899999999999999999999999999999999


Q ss_pred             eecCcccC
Q psy14567        188 VMTQMGRT  195 (238)
Q Consensus       188 v~t~~~~~  195 (238)
                      +.|.-...
T Consensus       273 ~~T~Ass~  280 (398)
T PRK13656        273 VVTQASSA  280 (398)
T ss_pred             ccchhhhc
Confidence            99976543

>PLN02650 dihydroflavonol-4-reductase

Probab=99.82  E-value=5.6e-19  Score=148.87  Aligned_cols=205  Identities=18%  Similarity=0.151  Sum_probs=147.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      ...+.++||||+|.||++++++|+++|++|++++|+.+..+.+....      +.+.++.+|+++.+.+.++++   .+|
T Consensus         3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~---~~d   79 (351)
T PLN02650          3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR---GCT   79 (351)
T ss_pred             CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh---CCC
Confidence            44567899999999999999999999999999998876554432211      247788999999999888877   479


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC--------------
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL--------------  149 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------------  149 (238)
                      +|||+|+....   ...+  . ....+++|+.++..+++++.+...    .+++|++||.....+.              
T Consensus        80 ~ViH~A~~~~~---~~~~--~-~~~~~~~Nv~gt~~ll~aa~~~~~----~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~  149 (351)
T PLN02650         80 GVFHVATPMDF---ESKD--P-ENEVIKPTVNGMLSIMKACAKAKT----VRRIVFTSSAGTVNVEEHQKPVYDEDCWSD  149 (351)
T ss_pred             EEEEeCCCCCC---CCCC--c-hhhhhhHHHHHHHHHHHHHHhcCC----ceEEEEecchhhcccCCCCCCccCcccCCc
Confidence            99999986431   1111  1 345688999999999999876421    2589999987432110              


Q ss_pred             --------CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCcc-------C--CcccCCCC
Q psy14567        150 --------EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKA-------G--PMLAKTPL  212 (238)
Q Consensus       150 --------~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~-------~--~~~~~~~~  212 (238)
                              .+...|+.||.+.+.+++.++.+   +|++++.+.|+.+.+|....... ....       .  ........
T Consensus       150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  225 (351)
T PLN02650        150 LDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMP-PSLITALSLITGNEAHYSIIKQ  225 (351)
T ss_pred             hhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCC-ccHHHHHHHhcCCccccCcCCC
Confidence                    01237999999999999988776   37999999999999986432111 1110       0  00111123


Q ss_pred             CCcCCCCCccccccccccc
Q psy14567        213 GRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       213 ~r~~~~~~ia~~~~~l~s~  231 (238)
                      +.+...+|+++++.+++..
T Consensus       226 r~~v~V~Dva~a~~~~l~~  244 (351)
T PLN02650        226 GQFVHLDDLCNAHIFLFEH  244 (351)
T ss_pred             cceeeHHHHHHHHHHHhcC
Confidence            5788999999999988865

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.81  E-value=1.1e-18  Score=146.47  Aligned_cols=212  Identities=16%  Similarity=0.099  Sum_probs=149.2

Q ss_pred             eeeeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHH---h--hCCCceEEEeecCCHHHHHHHHHh
Q psy14567          4 FAKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLK---Q--AFPNVQTVQVDLQDWARTRAAVSK   78 (238)
Q Consensus         4 ~~~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~~~~~~~~D~~~~~~v~~~~~~   78 (238)
                      ++-|++.+.++++||||+|+||++++++|++.|++|+++.|+.+......   .  ..+++.++.+|++|++++.++++ 
T Consensus         1 ~~~~~~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   79 (338)
T PLN00198          1 MATLTPTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA-   79 (338)
T ss_pred             CCcccCCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh-
Confidence            35688888999999999999999999999999999988888765432221   1  12357889999999998888776 


Q ss_pred             cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc----------
Q psy14567         79 VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA----------  148 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------  148 (238)
                        ++|++||+|+...   ....  +. ....+++|+.++..+++++.+..   + .+++|++||.+....          
T Consensus        80 --~~d~vih~A~~~~---~~~~--~~-~~~~~~~nv~g~~~ll~a~~~~~---~-~~~~v~~SS~~~~g~~~~~~~~~~~  147 (338)
T PLN00198         80 --GCDLVFHVATPVN---FASE--DP-ENDMIKPAIQGVHNVLKACAKAK---S-VKRVILTSSAAAVSINKLSGTGLVM  147 (338)
T ss_pred             --cCCEEEEeCCCCc---cCCC--Ch-HHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEeecceeeeccCCCCCCcee
Confidence              4799999998532   1111  11 35567899999999999986531   2 369999999754321          


Q ss_pred             --------------CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-----------CCcc
Q psy14567        149 --------------LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-----------PAKA  203 (238)
Q Consensus       149 --------------~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-----------~~~~  203 (238)
                                    .++...|+.||.+.+.+++.++.+   +|+.+..+.|+.+..|........           ....
T Consensus       148 ~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~  224 (338)
T PLN00198        148 NEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFL  224 (338)
T ss_pred             ccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccc
Confidence                          123457999999999999888765   378999999999998864221100           0000


Q ss_pred             CCcccCCC----CCCcCCCCCccccccccccc
Q psy14567        204 GPMLAKTP----LGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       204 ~~~~~~~~----~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ..-....+    ..-+...+|+++++..++..
T Consensus       225 ~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        225 INGLKGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             cccccccccccCCcceeEHHHHHHHHHHHhhC
Confidence            00000111    13567888899888777654

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.81  E-value=4.1e-19  Score=147.97  Aligned_cols=205  Identities=15%  Similarity=0.098  Sum_probs=144.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh------CCCceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA------FPNVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      ..++++||||+|+||++++++|+++|++|+++.|+.+..+.+...      .+++.++.+|+++++++.++++   .+|+
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~   80 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE---GCDA   80 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh---CCCE
Confidence            346889999999999999999999999999888887654332221      1357889999999999888887   4899


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-cC--------------
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-AL--------------  149 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~--------------  149 (238)
                      +||+|+.....   ..+  . ....+++|+.++..+++++...   .+ -++||++||..+.. +.              
T Consensus        81 vih~A~~~~~~---~~~--~-~~~~~~~nv~gt~~ll~~~~~~---~~-v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~  150 (322)
T PLN02986         81 VFHTASPVFFT---VKD--P-QTELIDPALKGTINVLNTCKET---PS-VKRVILTSSTAAVLFRQPPIEANDVVDETFF  150 (322)
T ss_pred             EEEeCCCcCCC---CCC--c-hhhhhHHHHHHHHHHHHHHHhc---CC-ccEEEEecchhheecCCccCCCCCCcCcccC
Confidence            99999864321   111  1 3456889999999999987542   12 35899999976421 10              


Q ss_pred             -------CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC-CCCccCCccc-----CCCCCCcC
Q psy14567        150 -------EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-DPAKAGPMLA-----KTPLGRFA  216 (238)
Q Consensus       150 -------~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~-----~~~~~r~~  216 (238)
                             .....|+.||.+.+.+++.+..++   |+.++.+.|+.+.+|....... .......+..     ......+.
T Consensus       151 ~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v  227 (322)
T PLN02986        151 SDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFV  227 (322)
T ss_pred             CChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCccee
Confidence                   013569999999999998887654   7999999999999986432110 0000000000     11223577


Q ss_pred             CCCCccccccccccc
Q psy14567        217 GKLKPKPWNRWLLPS  231 (238)
Q Consensus       217 ~~~~ia~~~~~l~s~  231 (238)
                      ..+|+|++++.++..
T Consensus       228 ~v~Dva~a~~~al~~  242 (322)
T PLN02986        228 DVRDVALAHIKALET  242 (322)
T ss_pred             EHHHHHHHHHHHhcC
Confidence            889999998877654

>PLN02583 cinnamoyl-CoA reductase

Probab=99.80  E-value=2.1e-18  Score=142.17  Aligned_cols=200  Identities=11%  Similarity=0.027  Sum_probs=139.7

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH--hHHHHHhh----CCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA--NLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      .++++||||+|+||++++++|+++|++|+++.|+.+  ...+....    ..++.++.+|++|.+++.+++.   ..|.+
T Consensus         6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~---~~d~v   82 (297)
T PLN02583          6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK---GCSGL   82 (297)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc---CCCEE
Confidence            357899999999999999999999999999998633  22222222    2357889999999999887776   47888


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-C------------C-
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-E------------G-  151 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~------------~-  151 (238)
                      +|.++....     .. .+ ++.++++|+.+++.+++++.+.+   + .++||++||..+.... +            + 
T Consensus        83 ~~~~~~~~~-----~~-~~-~~~~~~~nv~gt~~ll~aa~~~~---~-v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~  151 (297)
T PLN02583         83 FCCFDPPSD-----YP-SY-DEKMVDVEVRAAHNVLEACAQTD---T-IEKVVFTSSLTAVIWRDDNISTQKDVDERSWS  151 (297)
T ss_pred             EEeCccCCc-----cc-cc-HHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEecchHheecccccCCCCCCCCcccCC
Confidence            887653321     11 22 57789999999999999997653   1 3699999998653210 0            0 


Q ss_pred             --------CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCC--CCCcCCCCCc
Q psy14567        152 --------HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTP--LGRFAGKLKP  221 (238)
Q Consensus       152 --------~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~r~~~~~~i  221 (238)
                              ...|+.||...+.++..++.+   .|++++.|.|+.+.+|......  + .........+  ...+...+|+
T Consensus       152 ~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~--~-~~~~~~~~~~~~~~~~v~V~Dv  225 (297)
T PLN02583        152 DQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHN--P-YLKGAAQMYENGVLVTVDVNFL  225 (297)
T ss_pred             CHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCch--h-hhcCCcccCcccCcceEEHHHH
Confidence                    015999999999998877655   3799999999999988643211  0 1110000001  1236788999


Q ss_pred             cccccccccc
Q psy14567        222 KPWNRWLLPS  231 (238)
Q Consensus       222 a~~~~~l~s~  231 (238)
                      |++.+..+..
T Consensus       226 a~a~~~al~~  235 (297)
T PLN02583        226 VDAHIRAFED  235 (297)
T ss_pred             HHHHHHHhcC
Confidence            9998877754

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.79  E-value=1.2e-18  Score=146.19  Aligned_cols=214  Identities=15%  Similarity=-0.007  Sum_probs=141.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-----HHHHHhh----CCCceEEEeecCCHHHHHHHHHhcCCc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-----LDSLKQA----FPNVQTVQVDLQDWARTRAAVSKVGPV   82 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~g~i   82 (238)
                      .++++||||+|+||++++++|++.|++|++++|+.+.     ++.+...    ...+.++.+|++|.+++.++++.+ ++
T Consensus         6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~   84 (340)
T PLN02653          6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI-KP   84 (340)
T ss_pred             CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc-CC
Confidence            4568999999999999999999999999999887542     3333211    134788999999999999999876 48


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc----------ccCCCC
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK----------TALEGH  152 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------~~~~~~  152 (238)
                      |+|||+|+......    ..++ .+..+++|+.++..+++++.+...+++.--++|++||....          .+..+.
T Consensus        85 d~Vih~A~~~~~~~----~~~~-~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~  159 (340)
T PLN02653         85 DEVYNLAAQSHVAV----SFEM-PDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPR  159 (340)
T ss_pred             CEEEECCcccchhh----hhhC-hhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCC
Confidence            99999999754321    1122 45567899999999999998876532111268888775321          112246


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCC---CCeEEEEEeCCceecCcccCC-------CCCCCccCCcccCCCCCCcCCCCCcc
Q psy14567        153 TIYSASKAALDSITRTMALELGP---YNIRVNSVQPTVVMTQMGRTG-------WSDPAKAGPMLAKTPLGRFAGKLKPK  222 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~---~~i~v~~i~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~r~~~~~~ia  222 (238)
                      ..|+.||.+.+.+++.++.+++-   .++.+|.+.|+.-.+.+....       .......-........+-+...+|++
T Consensus       160 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a  239 (340)
T PLN02653        160 SPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYV  239 (340)
T ss_pred             ChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHH
Confidence            78999999999999999887642   233445555654322110000       00000000011122334567888889


Q ss_pred             ccccccccc
Q psy14567        223 PWNRWLLPS  231 (238)
Q Consensus       223 ~~~~~l~s~  231 (238)
                      ++++.++..
T Consensus       240 ~a~~~~~~~  248 (340)
T PLN02653        240 EAMWLMLQQ  248 (340)
T ss_pred             HHHHHHHhc
Confidence            888877654

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.78  E-value=1.5e-17  Score=143.79  Aligned_cols=172  Identities=12%  Similarity=0.062  Sum_probs=126.9

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh----H----------------hHHHHHh-hCCCceEEEeecCCHH
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ----A----------------NLDSLKQ-AFPNVQTVQVDLQDWA   70 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~----~----------------~~~~~~~-~~~~~~~~~~D~~~~~   70 (238)
                      .+.++||||+|+||++++++|+++|++|++++|..    +                .++.+.. ...++.++.+|++|.+
T Consensus        47 ~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~  126 (442)
T PLN02572         47 KKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFE  126 (442)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHH
Confidence            34588999999999999999999999999876421    1                1111111 1235889999999999


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc---
Q psy14567         71 RTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT---  147 (238)
Q Consensus        71 ~v~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---  147 (238)
                      ++.++++.. ++|+|||+|+... .+....++++ ++..+++|+.+++++++++...-.    ..++|++||....-   
T Consensus       127 ~v~~~l~~~-~~D~ViHlAa~~~-~~~~~~~~~~-~~~~~~~Nv~gt~nlleaa~~~gv----~~~~V~~SS~~vYG~~~  199 (442)
T PLN02572        127 FLSEAFKSF-EPDAVVHFGEQRS-APYSMIDRSR-AVFTQHNNVIGTLNVLFAIKEFAP----DCHLVKLGTMGEYGTPN  199 (442)
T ss_pred             HHHHHHHhC-CCCEEEECCCccc-ChhhhcChhh-HHHHHHHHHHHHHHHHHHHHHhCC----CccEEEEecceecCCCC
Confidence            999999876 5899999997643 2233334444 677789999999999999865321    24899999865321   


Q ss_pred             ---------------------cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc
Q psy14567        148 ---------------------ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       148 ---------------------~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~  193 (238)
                                           +..+...|+.||.+.+.+++.++..   +|+.+..+.|+.+..|..
T Consensus       200 ~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~  263 (442)
T PLN02572        200 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRT  263 (442)
T ss_pred             CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCCC
Confidence                                 1123458999999999999887665   379999999999988753

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.78  E-value=2e-17  Score=139.49  Aligned_cols=173  Identities=24%  Similarity=0.161  Sum_probs=130.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      ...+++||||+|.||++++++|+++|++|++++|+.+..+.+....   .++.++.+|+++.+++.++++   .+|+|||
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~Vih   85 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK---GCDGVFH   85 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc---CCCEEEE
Confidence            3446899999999999999999999999999999876655544332   357889999999999888876   4799999


Q ss_pred             ccCCCCCCC-CCCCChHHH-HHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC----------------
Q psy14567         88 NAAVARFDR-FLDIDEENL-IDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL----------------  149 (238)
Q Consensus        88 ~ag~~~~~~-~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------  149 (238)
                      +|+...... ....+.++. ..+.++.|+.++..+++++.+..   + .+++|++||.+.....                
T Consensus        86 ~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~-~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~  161 (353)
T PLN02896         86 VAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---T-VKRVVFTSSISTLTAKDSNGRWRAVVDETCQT  161 (353)
T ss_pred             CCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---C-ccEEEEEechhhccccccCCCCCCccCcccCC
Confidence            999764322 122233321 24567888899999999986542   1 3589999996543210                


Q ss_pred             ---------CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc
Q psy14567        150 ---------EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       150 ---------~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~  193 (238)
                               +....|+.||.+.+.+++.++.++   ++++..+.|+.+..|..
T Consensus       162 p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~  211 (353)
T PLN02896        162 PIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFL  211 (353)
T ss_pred             cHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCc
Confidence                     112379999999999998887654   79999999999988864

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.76  E-value=1.6e-17  Score=139.67  Aligned_cols=154  Identities=15%  Similarity=0.052  Sum_probs=114.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH-----hHHHHHhh-----CCCceEEEeecCCHHHHHHHHHhcCCc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA-----NLDSLKQA-----FPNVQTVQVDLQDWARTRAAVSKVGPV   82 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~g~i   82 (238)
                      ++++||||+|+||++++++|++.|++|++++|+.+     .++.+.+.     ..++.++.+|++|.+++.++++.. ++
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-~~   79 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI-KP   79 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC-CC
Confidence            46789999999999999999999999999998753     22222211     135789999999999999999876 48


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-----------ccCCC
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-----------TALEG  151 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~  151 (238)
                      |+|||+|+.......    .+. -...+++|+.++..+++++.+.-.++  ..++|++||....           .+..+
T Consensus        80 d~ViH~Aa~~~~~~~----~~~-~~~~~~~n~~gt~~ll~a~~~~~~~~--~~~~v~~SS~~vyg~~~~~~~~E~~~~~p  152 (343)
T TIGR01472        80 TEIYNLAAQSHVKVS----FEI-PEYTADVDGIGTLRLLEAVRTLGLIK--SVKFYQASTSELYGKVQEIPQNETTPFYP  152 (343)
T ss_pred             CEEEECCcccccchh----hhC-hHHHHHHHHHHHHHHHHHHHHhCCCc--CeeEEEeccHHhhCCCCCCCCCCCCCCCC
Confidence            999999997643211    111 23456789999999999987642211  2378999885321           12235


Q ss_pred             CchhhHHHHHHHHHHHHHHHHhC
Q psy14567        152 HTIYSASKAALDSITRTMALELG  174 (238)
Q Consensus       152 ~~~y~~sK~al~~l~~~l~~~~~  174 (238)
                      ...|+.||.+.+.+++.++.++.
T Consensus       153 ~~~Y~~sK~~~e~~~~~~~~~~~  175 (343)
T TIGR01472       153 RSPYAAAKLYAHWITVNYREAYG  175 (343)
T ss_pred             CChhHHHHHHHHHHHHHHHHHhC
Confidence            67899999999999999887763

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.76  E-value=2.9e-17  Score=132.23  Aligned_cols=201  Identities=14%  Similarity=0.028  Sum_probs=132.7

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCH-HHHHHHHHhc-CCccEEE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDW-ARTRAAVSKV-GPVDVLI   86 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~-g~id~li   86 (238)
                      +.+.+.++||||+|+||++++++|++.|++|+++.|+.++..+......++.++++|+++. +++   .+.+ .++|++|
T Consensus        14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l---~~~~~~~~d~vi   90 (251)
T PLN00141         14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKL---VEAIGDDSDAVI   90 (251)
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHH---HHHhhcCCCEEE
Confidence            3456788999999999999999999999999999999887655443334688899999983 433   3444 3699999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc---cCCCCchhhHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT---ALEGHTIYSASKAALD  163 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---~~~~~~~y~~sK~al~  163 (238)
                      +++|......    ..+     .+++|..+...+++++.    +.+ .+++|++||.....   +.+....|...|....
T Consensus        91 ~~~g~~~~~~----~~~-----~~~~n~~~~~~ll~a~~----~~~-~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~  156 (251)
T PLN00141         91 CATGFRRSFD----PFA-----PWKVDNFGTVNLVEACR----KAG-VTRFILVSSILVNGAAMGQILNPAYIFLNLFGL  156 (251)
T ss_pred             ECCCCCcCCC----CCC-----ceeeehHHHHHHHHHHH----HcC-CCEEEEEccccccCCCcccccCcchhHHHHHHH
Confidence            9998642111    011     13577788888888864    333 47999999986321   2222345666665443


Q ss_pred             HH-HHHHHHH-hCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SI-TRTMALE-LGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l-~~~l~~~-~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+ .+..+.+ +...|++++.|.||++.++......   .. .  ....+.....+++|+|+.+..++.+.
T Consensus       157 ~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~---~~-~--~~~~~~~~~i~~~dvA~~~~~~~~~~  221 (251)
T PLN00141        157 TLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNI---VM-E--PEDTLYEGSISRDQVAEVAVEALLCP  221 (251)
T ss_pred             HHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceE---EE-C--CCCccccCcccHHHHHHHHHHHhcCh
Confidence            33 2333332 4567899999999999876432110   00 0  00111223578999999999987664

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.76  E-value=2.8e-17  Score=138.72  Aligned_cols=210  Identities=15%  Similarity=0.028  Sum_probs=139.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEE-EecCChH--hHHHHHh--hCCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIII-ALSKTQA--NLDSLKQ--AFPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~-~~~r~~~--~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      +.++||||+|+||+++++.|.++|++++ +.+|...  ....+..  ....+.++.+|++|.++++++++.. ++|+|||
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~D~Vih   80 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-QPDCVMH   80 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-CCCEEEE
Confidence            4689999999999999999999998654 4554422  1222222  1234778899999999999988864 5899999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh---c-cCCceEEEEcccccc-------------ccCC
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID---H-KIQGSIVNVSSIAGK-------------TALE  150 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~-~~~g~iv~isS~~~~-------------~~~~  150 (238)
                      +||....    +.+.++ ++..+++|+.++..+++++.+.+..   . ....++|++||....             .+..
T Consensus        81 ~A~~~~~----~~~~~~-~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~  155 (355)
T PRK10217         81 LAAESHV----DRSIDG-PAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYA  155 (355)
T ss_pred             CCcccCc----chhhhC-hHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCC
Confidence            9987532    122333 6778899999999999999875321   1 112489999985421             1223


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccC------C---cccCCCCCCcCCCCCc
Q psy14567        151 GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAG------P---MLAKTPLGRFAGKLKP  221 (238)
Q Consensus       151 ~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~------~---~~~~~~~~r~~~~~~i  221 (238)
                      +...|+.||.+.+.+++.++.++   ++++..+.|+.+..|-.......+.+..      .   ........-+...+|+
T Consensus       156 p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~  232 (355)
T PRK10217        156 PSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDH  232 (355)
T ss_pred             CCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHH
Confidence            56789999999999999987775   5677777888777664311000000000      0   0111123345778888


Q ss_pred             cccccccccc
Q psy14567        222 KPWNRWLLPS  231 (238)
Q Consensus       222 a~~~~~l~s~  231 (238)
                      ++++..++..
T Consensus       233 a~a~~~~~~~  242 (355)
T PRK10217        233 ARALYCVATT  242 (355)
T ss_pred             HHHHHHHHhc
Confidence            8887766544

>PLN02214 cinnamoyl-CoA reductase

Probab=99.75  E-value=4.7e-17  Score=136.71  Aligned_cols=200  Identities=13%  Similarity=0.109  Sum_probs=141.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHH-----HHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLD-----SLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      +.++++||||+|.||++++++|+++|++|++++|+.+...     .+....+.+.++.+|+++++++.++++   .+|+|
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~V   85 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID---GCDGV   85 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh---cCCEE
Confidence            4556899999999999999999999999999999865422     111111347788999999999888887   48999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC----------------
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL----------------  149 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------  149 (238)
                      ||+|+...         .+ ....+++|+.++..+++++.+.    + -+++|++||..+..+.                
T Consensus        86 ih~A~~~~---------~~-~~~~~~~nv~gt~~ll~aa~~~----~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~  150 (342)
T PLN02214         86 FHTASPVT---------DD-PEQMVEPAVNGAKFVINAAAEA----K-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSD  150 (342)
T ss_pred             EEecCCCC---------CC-HHHHHHHHHHHHHHHHHHHHhc----C-CCEEEEeccceeeeccCCCCCCcccCcccCCC
Confidence            99998541         12 4566899999999999998642    2 3589999996533210                


Q ss_pred             -----CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC--C----ccCCccc-CCCCCCcCC
Q psy14567        150 -----EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP--A----KAGPMLA-KTPLGRFAG  217 (238)
Q Consensus       150 -----~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~--~----~~~~~~~-~~~~~r~~~  217 (238)
                           .+...|+.+|.+.+.+++.++.++   |+++..+.|+.+-.|.........  .    ....... .....-+..
T Consensus       151 ~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~  227 (342)
T PLN02214        151 LDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVD  227 (342)
T ss_pred             hhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeE
Confidence                 023479999999999998887664   799999999999888533211000  0    0000000 011234567


Q ss_pred             CCCccccccccccc
Q psy14567        218 KLKPKPWNRWLLPS  231 (238)
Q Consensus       218 ~~~ia~~~~~l~s~  231 (238)
                      .+|+|++++.++..
T Consensus       228 V~Dva~a~~~al~~  241 (342)
T PLN02214        228 VRDVALAHVLVYEA  241 (342)
T ss_pred             HHHHHHHHHHHHhC
Confidence            88888888877654

>PRK06720 hypothetical protein; Provisional

Probab=99.75  E-value=2.9e-17  Score=123.91  Aligned_cols=133  Identities=15%  Similarity=0.114  Sum_probs=103.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHH----hcCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVS----KVGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~----~~g~i   82 (238)
                      +.++++||||++|||.++++.|++.|++|++++|+.+..++..++    .+...++++|++++++++++++    .+|++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            456889999999999999999999999999999998776544332    3456778999999999888764    45899


Q ss_pred             cEEEEccCCCCCC-CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC------CceEEEEccccccc
Q psy14567         83 DVLINNAAVARFD-RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI------QGSIVNVSSIAGKT  147 (238)
Q Consensus        83 d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~g~iv~isS~~~~~  147 (238)
                      |++|||||+.... ++++.+.++  ++  .+|+.+.+...+.+.+.+.+++.      .||+..|||.++..
T Consensus        95 DilVnnAG~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         95 DMLFQNAGLYKIDSIFSRQQEND--SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             CEEEECCCcCCCCCcccccchhH--hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            9999999987643 344434333  33  67888889999999999887642      57888888876543

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.73  E-value=8.3e-17  Score=133.37  Aligned_cols=165  Identities=19%  Similarity=0.142  Sum_probs=122.6

Q ss_pred             CCCCCCCCchHHHHHHHHhhCC--CEEEEecCCh--HhHHHHHhh--CCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQ--ANLDSLKQA--FPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~--~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      ++||||+|+||.+++++|++.|  .+|++++|..  .+.+.+...  .+++.++.+|++|++++.++++.+ ++|+|||+
T Consensus         2 ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~vi~~   80 (317)
T TIGR01181         2 ILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEH-QPDAVVHF   80 (317)
T ss_pred             EEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhc-CCCEEEEc
Confidence            6899999999999999999887  6888887632  122222211  236788999999999999998865 58999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc------------cCCCCchhh
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT------------ALEGHTIYS  156 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~y~  156 (238)
                      |+.....    .+.++ .+..+++|+.++..+++++.+.+.    +.+++++||.....            +..+...|+
T Consensus        81 a~~~~~~----~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~----~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~  151 (317)
T TIGR01181        81 AAESHVD----RSISG-PAAFIETNVVGTYTLLEAVRKYWH----EFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYS  151 (317)
T ss_pred             ccccCch----hhhhC-HHHHHHHHHHHHHHHHHHHHhcCC----CceEEEeeccceeCCCCCCCCcCCCCCCCCCCchH
Confidence            9875421    12233 567789999999999988765432    34899999854211            122345899


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      .+|.+.+.+++.++.+.   ++++..+.|+.+..+.
T Consensus       152 ~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~  184 (317)
T TIGR01181       152 ASKAASDHLVRAYHRTY---GLPALITRCSNNYGPY  184 (317)
T ss_pred             HHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCC
Confidence            99999999999887764   6888999999887764

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>KOG1502|consensus

Probab=99.73  E-value=1.1e-16  Score=129.94  Aligned_cols=206  Identities=17%  Similarity=0.099  Sum_probs=146.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHH------HHhhCCCceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDS------LKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      ...++.+|||||.||+++++.|+++||+|..+.|++++.+.      +.....+...+..|++++++.+++++   +.|+
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~---gcdg   81 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID---GCDG   81 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh---CCCE
Confidence            45677889999999999999999999999999999987433      32222358899999999999999988   4799


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-CC------------
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-EG------------  151 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~------------  151 (238)
                      |+|.|........   ++   -.++++..+.|+.++++++...-    .-.|||++||.++.... +.            
T Consensus        82 VfH~Asp~~~~~~---~~---e~~li~pav~Gt~nVL~ac~~~~----sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~w  151 (327)
T KOG1502|consen   82 VFHTASPVDFDLE---DP---EKELIDPAVKGTKNVLEACKKTK----SVKRVVYTSSTAAVRYNGPNIGENSVVDEESW  151 (327)
T ss_pred             EEEeCccCCCCCC---Cc---HHhhhhHHHHHHHHHHHHHhccC----CcceEEEeccHHHhccCCcCCCCCcccccccC
Confidence            9999986643221   12   24668899999999999986532    13589999999986543 11            


Q ss_pred             ---------CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC-----CccCC-cccCCCC-CCc
Q psy14567        152 ---------HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP-----AKAGP-MLAKTPL-GRF  215 (238)
Q Consensus       152 ---------~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~-----~~~~~-~~~~~~~-~r~  215 (238)
                               ...|+.||.-.+..+..++.+-   |+....|+|++|-.|.........     ++... ....... -.+
T Consensus       152 sd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~---~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~  228 (327)
T KOG1502|consen  152 SDLDFCRCKKLWYALSKTLAEKAAWEFAKEN---GLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAF  228 (327)
T ss_pred             CcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC---CccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceee
Confidence                     1257777766666665555553   789999999999998765522110     11111 1111111 126


Q ss_pred             CCCCCcccccccccccc
Q psy14567        216 AGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       216 ~~~~~ia~~~~~l~s~~  232 (238)
                      .+.+|+|++-++++.++
T Consensus       229 VdVrDVA~AHv~a~E~~  245 (327)
T KOG1502|consen  229 VDVRDVALAHVLALEKP  245 (327)
T ss_pred             EeHHHHHHHHHHHHcCc
Confidence            78899999888877664

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.72  E-value=1.9e-16  Score=125.36  Aligned_cols=197  Identities=19%  Similarity=0.157  Sum_probs=142.1

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC--EEEEecC-----ChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA--IIIALSK-----TQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      .++||||.|.||.++++++..+..  +|+.++.     |.+++..+. ..++..+++.|+.|.+.+.+++++. ++|+++
T Consensus         2 ~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~-~~~~~~fv~~DI~D~~~v~~~~~~~-~~D~Vv   79 (340)
T COG1088           2 KILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVE-DSPRYRFVQGDICDRELVDRLFKEY-QPDAVV   79 (340)
T ss_pred             cEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhh-cCCCceEEeccccCHHHHHHHHHhc-CCCeEE
Confidence            468899999999999999988764  4677664     344444443 2357999999999999999999987 689999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccc-------------ccccCCCCc
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIA-------------GKTALEGHT  153 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~-------------~~~~~~~~~  153 (238)
                      |-|+-....+...    + -...+++|+.|++.+++++..+..+    -++++||.-.             ...+..+..
T Consensus        80 hfAAESHVDRSI~----~-P~~Fi~TNv~GT~~LLEaar~~~~~----frf~HISTDEVYG~l~~~~~~FtE~tp~~PsS  150 (340)
T COG1088          80 HFAAESHVDRSID----G-PAPFIQTNVVGTYTLLEAARKYWGK----FRFHHISTDEVYGDLGLDDDAFTETTPYNPSS  150 (340)
T ss_pred             Eechhcccccccc----C-hhhhhhcchHHHHHHHHHHHHhccc----ceEEEeccccccccccCCCCCcccCCCCCCCC
Confidence            9998665433222    2 3445789999999999999877642    3788887621             234566789


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPW  224 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~  224 (238)
                      +|++|||+-++|++++.+.+   |+.+....+..-..|.+......|....+.....|+.-.++...+-++
T Consensus       151 PYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDW  218 (340)
T COG1088         151 PYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDW  218 (340)
T ss_pred             CcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeee
Confidence            99999999999999998887   688888888877777654322223333334444455555555555544

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.72  E-value=1.4e-16  Score=132.58  Aligned_cols=204  Identities=13%  Similarity=0.078  Sum_probs=141.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHH---Hhh---CCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSL---KQA---FPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~---~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      .+.++||||+|.||++++++|+++|++|++++|+.+.....   ...   .+++.++.+|+++++++.++++   ++|+|
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~d~V   80 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD---GCEGV   80 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc---CCCEE
Confidence            46789999999999999999999999999988876543222   111   2367889999999998888877   47999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-c-cC---C----------
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-T-AL---E----------  150 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~-~~---~----------  150 (238)
                      ||+|+.....   ..++   ....+++|+.++..+++++....   + ..++|++||..+. . +.   +          
T Consensus        81 ih~A~~~~~~---~~~~---~~~~~~~nv~gt~~ll~a~~~~~---~-~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~  150 (322)
T PLN02662         81 FHTASPFYHD---VTDP---QAELIDPAVKGTLNVLRSCAKVP---S-VKRVVVTSSMAAVAYNGKPLTPDVVVDETWFS  150 (322)
T ss_pred             EEeCCcccCC---CCCh---HHHHHHHHHHHHHHHHHHHHhCC---C-CCEEEEccCHHHhcCCCcCCCCCCcCCcccCC
Confidence            9999865311   1111   24568999999999999986431   2 3589999997531 1 10   0          


Q ss_pred             -C------CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC-CCCccCCcc---cCC--CCCCcCC
Q psy14567        151 -G------HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-DPAKAGPML---AKT--PLGRFAG  217 (238)
Q Consensus       151 -~------~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~---~~~--~~~r~~~  217 (238)
                       +      ...|+.+|.+.+.+++.+..+.   +++++.+.|+.+.+|....... .........   ...  ....+..
T Consensus       151 ~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  227 (322)
T PLN02662        151 DPAFCEESKLWYVLSKTLAEEAAWKFAKEN---GIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVD  227 (322)
T ss_pred             ChhHhhcccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEE
Confidence             1      1479999999999888776553   7999999999999886432110 000000000   011  1234678


Q ss_pred             CCCccccccccccc
Q psy14567        218 KLKPKPWNRWLLPS  231 (238)
Q Consensus       218 ~~~ia~~~~~l~s~  231 (238)
                      .+|+|++++.++..
T Consensus       228 v~Dva~a~~~~~~~  241 (322)
T PLN02662        228 VRDVANAHIQAFEI  241 (322)
T ss_pred             HHHHHHHHHHHhcC
Confidence            89999998887764

>PLN02686 cinnamoyl-CoA reductase

Probab=99.72  E-value=4.6e-16  Score=131.83  Aligned_cols=207  Identities=14%  Similarity=0.051  Sum_probs=140.9

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh---------CCCceEEEeecCCHHHHHHHHHhc
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA---------FPNVQTVQVDLQDWARTRAAVSKV   79 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---------~~~~~~~~~D~~~~~~v~~~~~~~   79 (238)
                      ..+.++++||||+|+||++++++|+++|++|+++.|+.+..+.+...         .+.+.++.+|++|.+++.++++. 
T Consensus        50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~-  128 (367)
T PLN02686         50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG-  128 (367)
T ss_pred             CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh-
Confidence            45667889999999999999999999999999988887765554332         12477889999999999888874 


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-c--------c--
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-T--------A--  148 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~--------~--  148 (238)
                        +|.+||.++.........  .   .....++|+.++..+++++...   .+ -.++|++||..+. .        +  
T Consensus       129 --~d~V~hlA~~~~~~~~~~--~---~~~~~~~nv~gt~~llea~~~~---~~-v~r~V~~SS~~~~vyg~~~~~~~~~~  197 (367)
T PLN02686        129 --CAGVFHTSAFVDPAGLSG--Y---TKSMAELEAKASENVIEACVRT---ES-VRKCVFTSSLLACVWRQNYPHDLPPV  197 (367)
T ss_pred             --ccEEEecCeeeccccccc--c---cchhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccHHHhcccccCCCCCCcc
Confidence              799999998764322111  1   1233567899998888887532   12 3489999996311 0        0  


Q ss_pred             ------------CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC--CCccCCcccCCC--C
Q psy14567        149 ------------LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD--PAKAGPMLAKTP--L  212 (238)
Q Consensus       149 ------------~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~--~  212 (238)
                                  ..+...|+.+|.+.+.+++.++.+   +|++++.+.|+.+.+|........  ...........+  .
T Consensus       198 i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g~  274 (367)
T PLN02686        198 IDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADGL  274 (367)
T ss_pred             cCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCCC
Confidence                        012347999999999999887765   489999999999999853211000  000000000011  1


Q ss_pred             CCcCCCCCcccccccccc
Q psy14567        213 GRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       213 ~r~~~~~~ia~~~~~l~s  230 (238)
                      .-+...+|++++++.++.
T Consensus       275 ~~~v~V~Dva~A~~~al~  292 (367)
T PLN02686        275 LATADVERLAEAHVCVYE  292 (367)
T ss_pred             cCeEEHHHHHHHHHHHHh
Confidence            125678888888776664

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.69  E-value=8.1e-16  Score=125.42  Aligned_cols=164  Identities=19%  Similarity=0.092  Sum_probs=124.4

Q ss_pred             CCCCCCCchHHHHHHHHhhCC--CEEEEecCChHhHH-HHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANLD-SLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      +||||+|.||.+++++|+++|  ++|.+++++..... ......+...++.+|++|++++.++++   ..|+|||+|+..
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~---g~d~V~H~Aa~~   77 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALE---GVDVVFHTAAPV   77 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhc---CCceEEEeCccc
Confidence            689999999999999999999  68888888765432 222233334489999999999999988   479999999976


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc---C--------------CCCchh
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA---L--------------EGHTIY  155 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---~--------------~~~~~y  155 (238)
                      ....     ... .+.++++|+.|+-++++++...    + -.++|++||......   .              .....|
T Consensus        78 ~~~~-----~~~-~~~~~~vNV~GT~nvl~aa~~~----~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y  146 (280)
T PF01073_consen   78 PPWG-----DYP-PEEYYKVNVDGTRNVLEAARKA----G-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPY  146 (280)
T ss_pred             cccC-----ccc-HHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCch
Confidence            4432     122 5778899999999999998643    3 458999999876433   0              134589


Q ss_pred             hHHHHHHHHHHHHHHH-HhC-CCCeEEEEEeCCceecCcc
Q psy14567        156 SASKAALDSITRTMAL-ELG-PYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~-~~~-~~~i~v~~i~PG~v~t~~~  193 (238)
                      +.||+..+.++..... ++. ...++..+|.|..|..|..
T Consensus       147 ~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d  186 (280)
T PF01073_consen  147 AESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGD  186 (280)
T ss_pred             HHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccc
Confidence            9999999999877554 222 1258999999999988854

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.69  E-value=1.4e-15  Score=128.30  Aligned_cols=169  Identities=17%  Similarity=0.107  Sum_probs=120.8

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCE-EEEecCCh--HhHHHHHhhC--CCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAI-IIALSKTQ--ANLDSLKQAF--PNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~-V~~~~r~~--~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      ++||||+|+||++++++|+++|.+ |+.+++..  ...+.+....  ..+.++.+|++|.+++.+++++. ++|++||+|
T Consensus         3 ilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vih~A   81 (352)
T PRK10084          3 ILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQH-QPDAVMHLA   81 (352)
T ss_pred             EEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhc-CCCEEEECC
Confidence            689999999999999999999975 55555432  2222332221  34678899999999999998764 599999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCceEEEEccccccc------------------
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH----KIQGSIVNVSSIAGKT------------------  147 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~g~iv~isS~~~~~------------------  147 (238)
                      |......    +..+ .+..+++|+.++..+++++.+++...    +...++|++||.....                  
T Consensus        82 ~~~~~~~----~~~~-~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~  156 (352)
T PRK10084         82 AESHVDR----SITG-PAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFT  156 (352)
T ss_pred             cccCCcc----hhcC-chhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCcc
Confidence            9753221    1122 45678999999999999998775321    1124899998853211                  


Q ss_pred             ---cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        148 ---ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       148 ---~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                         +..+...|+.+|.+.+.+++.++.++   |+++..+.|+.+..|.
T Consensus       157 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~  201 (352)
T PRK10084        157 ETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPY  201 (352)
T ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCC
Confidence               12345699999999999999988775   4555666777766654

>PLN02240 UDP-glucose 4-epimerase

Probab=99.67  E-value=3.2e-15  Score=125.94  Aligned_cols=163  Identities=18%  Similarity=0.132  Sum_probs=117.8

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh----HHHHHhh----CCCceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN----LDSLKQA----FPNVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      ++++||||+|+||++++++|++.|++|++++|....    ...+...    ..++.++.+|+++++++.++++.. ++|+
T Consensus         6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-~~d~   84 (352)
T PLN02240          6 RTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-RFDA   84 (352)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-CCCE
Confidence            568899999999999999999999999999865321    2222221    235788999999999999988764 6899


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-----------ccCCCCc
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-----------TALEGHT  153 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~~  153 (238)
                      |||+|+......    +.++ ....+++|+.++..+++++..    .+ .+++|++||....           .+..+..
T Consensus        85 vih~a~~~~~~~----~~~~-~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~  154 (352)
T PLN02240         85 VIHFAGLKAVGE----SVAK-PLLYYDNNLVGTINLLEVMAK----HG-CKKLVFSSSATVYGQPEEVPCTEEFPLSATN  154 (352)
T ss_pred             EEEccccCCccc----cccC-HHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCC
Confidence            999999753211    1223 567789999999999887632    22 3589999986421           1223457


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCce
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVV  188 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v  188 (238)
                      .|+.+|.+.+.+++.++.+.  .++.+..+.|+.+
T Consensus       155 ~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v  187 (352)
T PLN02240        155 PYGRTKLFIEEICRDIHASD--PEWKIILLRYFNP  187 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCc
Confidence            89999999999999887552  2455555555433

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.67  E-value=1.4e-15  Score=126.81  Aligned_cols=159  Identities=21%  Similarity=0.194  Sum_probs=122.2

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      +++||||+|+||.+++++|++.|++|++++|+.+....+..  ..+.++.+|+++++++.++++   ++|++||+|+...
T Consensus         2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~~~~~l~~~~~---~~d~vi~~a~~~~   76 (328)
T TIGR03466         2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEG--LDVEIVEGDLRDPASLRKAVA---GCRALFHVAADYR   76 (328)
T ss_pred             eEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccccc--CCceEEEeeCCCHHHHHHHHh---CCCEEEEeceecc
Confidence            47899999999999999999999999999998765433321  257889999999999888877   4799999998542


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-C--------------CCchhhHH
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-E--------------GHTIYSAS  158 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~--------------~~~~y~~s  158 (238)
                      .   .   .++ .+..+++|+.++..+++++.+    .+ .+++|++||....... .              ....|+.+
T Consensus        77 ~---~---~~~-~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~s  144 (328)
T TIGR03466        77 L---W---APD-PEEMYAANVEGTRNLLRAALE----AG-VERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRS  144 (328)
T ss_pred             c---C---CCC-HHHHHHHHHHHHHHHHHHHHH----hC-CCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHH
Confidence            1   1   122 456688999999999888754    22 3589999996543210 0              13479999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      |.+.+.+++.+..+   .++++..+.|+.+..+.
T Consensus       145 K~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~  175 (328)
T TIGR03466       145 KFLAEQAALEMAAE---KGLPVVIVNPSTPIGPR  175 (328)
T ss_pred             HHHHHHHHHHHHHh---cCCCEEEEeCCccCCCC
Confidence            99999999887665   37889999999887654

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.67  E-value=3.9e-16  Score=125.59  Aligned_cols=163  Identities=16%  Similarity=0.184  Sum_probs=120.2

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhC----C--CceE----EEeecCCHHHHHHHHHhcCCcc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAF----P--NVQT----VQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~----~--~~~~----~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      ++||||+|-||++++++|++.+. ++++++|++.++-++..++    +  ++.+    +.+|++|.+.+..+++++ ++|
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~-~pd   79 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY-KPD   79 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT---T-S
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc-CCC
Confidence            47899999999999999999885 8999999999988887777    2  2433    478999999999999877 699


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      +++|.|+.-+. ++.+..    ....+++|+.|+.++++++..+-     -.++|++|+--+..|   ...|++||...+
T Consensus        80 iVfHaAA~KhV-pl~E~~----p~eav~tNv~GT~nv~~aa~~~~-----v~~~v~ISTDKAv~P---tnvmGatKrlaE  146 (293)
T PF02719_consen   80 IVFHAAALKHV-PLMEDN----PFEAVKTNVLGTQNVAEAAIEHG-----VERFVFISTDKAVNP---TNVMGATKRLAE  146 (293)
T ss_dssp             EEEE------H-HHHCCC----HHHHHHHHCHHHHHHHHHHHHTT------SEEEEEEECGCSS-----SHHHHHHHHHH
T ss_pred             EEEEChhcCCC-ChHHhC----HHHHHHHHHHHHHHHHHHHHHcC-----CCEEEEccccccCCC---CcHHHHHHHHHH
Confidence            99999998654 233333    35568999999999999997643     358999998766544   689999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecC
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQ  191 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~  191 (238)
                      .++...+......+.++.+|.=|.|-.+
T Consensus       147 ~l~~~~~~~~~~~~t~f~~VRFGNVlgS  174 (293)
T PF02719_consen  147 KLVQAANQYSGNSDTKFSSVRFGNVLGS  174 (293)
T ss_dssp             HHHHHHCCTSSSS--EEEEEEE-EETTG
T ss_pred             HHHHHHhhhCCCCCcEEEEEEecceecC
Confidence            9999998887667788888888888654

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.66  E-value=3.3e-15  Score=127.52  Aligned_cols=170  Identities=15%  Similarity=0.145  Sum_probs=123.6

Q ss_pred             eeCCCCcC--CCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHHHhhC-----CCceEEEeecCCHHHHHHHHH
Q psy14567          6 KLHPDRTN--TKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVS   77 (238)
Q Consensus         6 ~l~~~~~~--v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~   77 (238)
                      .|.+++.+  .++||||+|.||++++++|+++ |++|++++|+.+..+.+....     ++++++.+|++|.+++.++++
T Consensus         6 ~~~~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~   85 (386)
T PLN02427          6 DLDGKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK   85 (386)
T ss_pred             cCCCCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh
Confidence            44555433  4899999999999999999998 589999998876655543321     358899999999999888877


Q ss_pred             hcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc----------
Q psy14567         78 KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT----------  147 (238)
Q Consensus        78 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------  147 (238)
                         .+|+|||+|+........ .++    ...+..|+.++..+++++..    .+  .++|++||....-          
T Consensus        86 ---~~d~ViHlAa~~~~~~~~-~~~----~~~~~~n~~gt~~ll~aa~~----~~--~r~v~~SS~~vYg~~~~~~~~e~  151 (386)
T PLN02427         86 ---MADLTINLAAICTPADYN-TRP----LDTIYSNFIDALPVVKYCSE----NN--KRLIHFSTCEVYGKTIGSFLPKD  151 (386)
T ss_pred             ---cCCEEEEcccccChhhhh-hCh----HHHHHHHHHHHHHHHHHHHh----cC--CEEEEEeeeeeeCCCcCCCCCcc
Confidence               379999999975432211 122    22356799999988887742    22  4899999864211          


Q ss_pred             -cC----------------------CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        148 -AL----------------------EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       148 -~~----------------------~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                       +.                      .+...|+.+|.+.+.+++.++..   .|+.+..+.|+.+..+.
T Consensus       152 ~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~  216 (386)
T PLN02427        152 HPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR  216 (386)
T ss_pred             cccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCC
Confidence             00                      01236999999999999876543   47899999999998875

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.66  E-value=6.3e-15  Score=123.51  Aligned_cols=164  Identities=12%  Similarity=0.061  Sum_probs=115.7

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhH----HHHHhh-CCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANL----DSLKQA-FPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~----~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      .++||||+|+||++++++|++.|++|++++|.....    ..+.+. ..+..++.+|++|.+++.++++.. ++|++||+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vvh~   80 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDH-AIDTVIHF   80 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcC-CCCEEEEC
Confidence            368999999999999999999999999887643221    122221 124677899999999998888753 59999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cC-CCCchhh
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------AL-EGHTIYS  156 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~-~~~~~y~  156 (238)
                      ||.......    .+. ....+++|+.++..+++++.    +.+ .+++|++||.....           +. .+...|+
T Consensus        81 a~~~~~~~~----~~~-~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~  150 (338)
T PRK10675         81 AGLKAVGES----VQK-PLEYYDNNVNGTLRLISAMR----AAN-VKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYG  150 (338)
T ss_pred             Cccccccch----hhC-HHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEeccHHhhCCCCCCccccccCCCCCCChhH
Confidence            987542211    122 34567899999999888764    333 45899999864321           11 2467999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceec
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMT  190 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t  190 (238)
                      .+|.+.+.+++.++.+..  ++++..+.|+.+..
T Consensus       151 ~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v~g  182 (338)
T PRK10675        151 KSKLMVEQILTDLQKAQP--DWSIALLRYFNPVG  182 (338)
T ss_pred             HHHHHHHHHHHHHHHhcC--CCcEEEEEeeeecC
Confidence            999999999999876543  35555555544443

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.65  E-value=5.4e-15  Score=124.52  Aligned_cols=164  Identities=16%  Similarity=0.133  Sum_probs=121.9

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh----HHHHHhh-----CCCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN----LDSLKQA-----FPNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      +.++||||+|-||.+++++|.++|++|++++|....    .......     ...+.++.+|++|.+++.++++   .+|
T Consensus        16 ~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~---~~d   92 (348)
T PRK15181         16 KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK---NVD   92 (348)
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh---CCC
Confidence            568999999999999999999999999999885432    2222111     1357789999999998888877   489


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCCC
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEGH  152 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  152 (238)
                      +|||.|+...... ...+    ....+++|+.++..+++++..    .+ -.++|++||.....           ...+.
T Consensus        93 ~ViHlAa~~~~~~-~~~~----~~~~~~~Nv~gt~nll~~~~~----~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~  162 (348)
T PRK15181         93 YVLHQAALGSVPR-SLKD----PIATNSANIDGFLNMLTAARD----AH-VSSFTYAASSSTYGDHPDLPKIEERIGRPL  162 (348)
T ss_pred             EEEECccccCchh-hhhC----HHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeechHhhCCCCCCCCCCCCCCCCC
Confidence            9999999754211 1112    234578999999999998753    22 34899999864321           11234


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      ..|+.+|.+.+.+++.++.+.   ++++..+.|+.+-.|-
T Consensus       163 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~vyGp~  199 (348)
T PRK15181        163 SPYAVTKYVNELYADVFARSY---EFNAIGLRYFNVFGRR  199 (348)
T ss_pred             ChhhHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCcC
Confidence            689999999999998876553   7899999999998875

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.64  E-value=7.4e-15  Score=122.18  Aligned_cols=165  Identities=16%  Similarity=0.112  Sum_probs=120.1

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-HHHHHhh--CCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-LDSLKQA--FPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      ++||||+|+||++++++|.++|++|++++|.... .+.+...  .+.+..+.+|+++++++.++++. +++|++||+||.
T Consensus         2 vlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~d~vv~~ag~   80 (328)
T TIGR01179         2 ILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE-HKIDAVIHFAGL   80 (328)
T ss_pred             EEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh-CCCcEEEECccc
Confidence            5789999999999999999999999888664322 1111111  12567889999999999998875 369999999997


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCCCchhhHHHH
Q psy14567         92 ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEGHTIYSASKA  160 (238)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~y~~sK~  160 (238)
                      .....    ...+ ....++.|+.++..+++++.+    .+ .+++|++||.....           +..+...|+.+|+
T Consensus        81 ~~~~~----~~~~-~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~  150 (328)
T TIGR01179        81 IAVGE----SVQD-PLKYYRNNVVNTLNLLEAMQQ----TG-VKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKL  150 (328)
T ss_pred             cCcch----hhcC-chhhhhhhHHHHHHHHHHHHh----cC-CCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHH
Confidence            64322    1122 345678999999999887643    22 35899998864321           1123468999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      +.+.+++.++.+.  .++++..+.|+.+..+.
T Consensus       151 ~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~  180 (328)
T TIGR01179       151 MSERILRDLSKAD--PGLSYVILRYFNVAGAD  180 (328)
T ss_pred             HHHHHHHHHHHhc--cCCCEEEEecCcccCCC
Confidence            9999999887652  36888999998887763

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.64  E-value=1e-14  Score=124.99  Aligned_cols=168  Identities=15%  Similarity=0.182  Sum_probs=137.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhC----C--CceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAF----P--NVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      +.++++||||+|-||+++++++++.+. ++++.+|++.++.++..++    +  ...++-+|+.|.+.+.++++.+ ++|
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-kvd  327 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-KVD  327 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-CCc
Confidence            567888899999999999999999886 8999999998866554444    2  4777889999999999999987 699


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      +++|.|+.-+. |..+.++    ...+.+|+.|+.++.+++...-     -.++|.+|+--+..|   ...|+++|...+
T Consensus       328 ~VfHAAA~KHV-Pl~E~nP----~Eai~tNV~GT~nv~~aa~~~~-----V~~~V~iSTDKAV~P---tNvmGaTKr~aE  394 (588)
T COG1086         328 IVFHAAALKHV-PLVEYNP----EEAIKTNVLGTENVAEAAIKNG-----VKKFVLISTDKAVNP---TNVMGATKRLAE  394 (588)
T ss_pred             eEEEhhhhccC-cchhcCH----HHHHHHhhHhHHHHHHHHHHhC-----CCEEEEEecCcccCC---chHhhHHHHHHH
Confidence            99999998753 4444443    4458999999999999997644     348999987666554   679999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      .++.+++......+=++..|.=|.|-.+.
T Consensus       395 ~~~~a~~~~~~~~~T~f~~VRFGNVlGSr  423 (588)
T COG1086         395 KLFQAANRNVSGTGTRFCVVRFGNVLGSR  423 (588)
T ss_pred             HHHHHHhhccCCCCcEEEEEEecceecCC
Confidence            99999988777656788889999887654

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.62  E-value=2.6e-14  Score=113.54  Aligned_cols=204  Identities=20%  Similarity=0.142  Sum_probs=144.4

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARF   94 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~   94 (238)
                      |+||||+|-||.+++++|.++|..|+.+.|+........... ++.++.+|+.+.++++++++.. ++|.+||+|+....
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~dl~~~~~~~~~~~~~-~~d~vi~~a~~~~~   78 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-NVEFVIGDLTDKEQLEKLLEKA-NIDVVIHLAAFSSN   78 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-TEEEEESETTSHHHHHHHHHHH-TESEEEEEBSSSSH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-eEEEEEeecccccccccccccc-CceEEEEeeccccc
Confidence            478999999999999999999999888877766543333222 7889999999999999999877 79999999987531


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-----------CCCchhhHHHHHHH
Q psy14567         95 DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-----------EGHTIYSASKAALD  163 (238)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~y~~sK~al~  163 (238)
                          ..+.++ ....++.|+.+...+++++..    .+ ..+++++||.......           .+...|+.+|...+
T Consensus        79 ----~~~~~~-~~~~~~~n~~~~~~ll~~~~~----~~-~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e  148 (236)
T PF01370_consen   79 ----PESFED-PEEIIEANVQGTRNLLEAARE----AG-VKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAE  148 (236)
T ss_dssp             ----HHHHHS-HHHHHHHHHHHHHHHHHHHHH----HT-TSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHH
T ss_pred             ----cccccc-ccccccccccccccccccccc----cc-ccccccccccccccccccccccccccccccccccccccccc
Confidence                111223 566678898888888888753    33 3589999996432211           23467999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC---CCccCC---------cccCCCCCCcCCCCCccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD---PAKAGP---------MLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~---~~~~~~---------~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      .+++.+....   ++++..+.|+.+-.+........   +.+...         ........-+...+|+|+++++++..
T Consensus       149 ~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~  225 (236)
T PF01370_consen  149 ELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALEN  225 (236)
T ss_dssp             HHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHH
T ss_pred             cccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhC
Confidence            9999988776   78999999999998871110000   001111         11222233456778888888877765


Q ss_pred             cc
Q psy14567        232 VG  233 (238)
Q Consensus       232 ~~  233 (238)
                      ..
T Consensus       226 ~~  227 (236)
T PF01370_consen  226 PK  227 (236)
T ss_dssp             SC
T ss_pred             CC
Confidence            43

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.62  E-value=1.5e-14  Score=123.36  Aligned_cols=159  Identities=17%  Similarity=0.194  Sum_probs=118.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHH------HHHhhCCCceEEEeecCCHHHHHHHHHhcC-Cc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLD------SLKQAFPNVQTVQVDLQDWARTRAAVSKVG-PV   82 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g-~i   82 (238)
                      .+...++||||+|+||++++++|+++|++|++++|+.+..+      +.....++++++.+|++|++++.++++..+ ++
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~  137 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV  137 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence            35567899999999999999999999999999999876432      222334578899999999999999998764 69


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |+||||+|.....     .     ...+++|+.+...+++++.    +.+ -+++|++||.....   +...|..+|...
T Consensus       138 D~Vi~~aa~~~~~-----~-----~~~~~vn~~~~~~ll~aa~----~~g-v~r~V~iSS~~v~~---p~~~~~~sK~~~  199 (390)
T PLN02657        138 DVVVSCLASRTGG-----V-----KDSWKIDYQATKNSLDAGR----EVG-AKHFVLLSAICVQK---PLLEFQRAKLKF  199 (390)
T ss_pred             cEEEECCccCCCC-----C-----ccchhhHHHHHHHHHHHHH----HcC-CCEEEEEeeccccC---cchHHHHHHHHH
Confidence            9999999853211     1     1124567778877777764    333 46899999986532   345788899888


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecC
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQ  191 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~  191 (238)
                      +...+.     ...+++...+.|+.+-.+
T Consensus       200 E~~l~~-----~~~gl~~tIlRp~~~~~~  223 (390)
T PLN02657        200 EAELQA-----LDSDFTYSIVRPTAFFKS  223 (390)
T ss_pred             HHHHHh-----ccCCCCEEEEccHHHhcc
Confidence            876654     235789999999877543

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.62  E-value=1.4e-14  Score=115.24  Aligned_cols=148  Identities=19%  Similarity=0.127  Sum_probs=112.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-HHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-LDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      .+++|||+|-||+|++.+|++.|++|++++.-... .+.+...  ...+++.|+.|.+.+++++++. +||.|||.||..
T Consensus         2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~--~~~f~~gDi~D~~~L~~vf~~~-~idaViHFAa~~   78 (329)
T COG1087           2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL--QFKFYEGDLLDRALLTAVFEEN-KIDAVVHFAASI   78 (329)
T ss_pred             eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc--cCceEEeccccHHHHHHHHHhc-CCCEEEECcccc
Confidence            46889999999999999999999999998865433 3233321  1689999999999999999887 799999999976


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccc-----------cccCCCCchhhHHHHH
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAG-----------KTALEGHTIYSASKAA  161 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-----------~~~~~~~~~y~~sK~a  161 (238)
                      ..+...    ++ -...++.|+.++..+++++...-     -.++||-||.+-           ..+..+..+|+.||..
T Consensus        79 ~VgESv----~~-Pl~Yy~NNv~gTl~Ll~am~~~g-----v~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm  148 (329)
T COG1087          79 SVGESV----QN-PLKYYDNNVVGTLNLIEAMLQTG-----VKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLM  148 (329)
T ss_pred             ccchhh----hC-HHHHHhhchHhHHHHHHHHHHhC-----CCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHH
Confidence            433222    22 35568899999999999886543     246777665432           1223456799999999


Q ss_pred             HHHHHHHHHHHhC
Q psy14567        162 LDSITRTMALELG  174 (238)
Q Consensus       162 l~~l~~~l~~~~~  174 (238)
                      .+.+.+.++....
T Consensus       149 ~E~iL~d~~~a~~  161 (329)
T COG1087         149 SEEILRDAAKANP  161 (329)
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999987764

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.61  E-value=1.6e-14  Score=122.01  Aligned_cols=158  Identities=18%  Similarity=0.224  Sum_probs=114.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCC--CEEEEecCChHhH---HHHHh---hC---------CCceEEEeecCCH------H
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANL---DSLKQ---AF---------PNVQTVQVDLQDW------A   70 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~---~~~~~---~~---------~~~~~~~~D~~~~------~   70 (238)
                      +++||||||+||++++++|++.|  ++|+.+.|+.+..   +.+.+   ..         +.+.++.+|++++      +
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            46899999999999999999998  7899999876521   12211   10         3688889999864      3


Q ss_pred             HHHHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-
Q psy14567         71 RTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-  149 (238)
Q Consensus        71 ~v~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  149 (238)
                      ....+.   ..+|++||+|+.....       .. ++...++|+.++..+++.+..    .+ ..+++++||....... 
T Consensus        81 ~~~~~~---~~~d~vih~a~~~~~~-------~~-~~~~~~~nv~g~~~ll~~a~~----~~-~~~~v~iSS~~v~~~~~  144 (367)
T TIGR01746        81 EWERLA---ENVDTIVHNGALVNWV-------YP-YSELRAANVLGTREVLRLAAS----GR-AKPLHYVSTISVLAAID  144 (367)
T ss_pred             HHHHHH---hhCCEEEeCCcEeccC-------Cc-HHHHhhhhhHHHHHHHHHHhh----CC-CceEEEEccccccCCcC
Confidence            333333   4689999999965321       11 455678999999998887753    22 3469999998654321 


Q ss_pred             ---------------CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecC
Q psy14567        150 ---------------EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ  191 (238)
Q Consensus       150 ---------------~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~  191 (238)
                                     .....|+.+|.+.+.+++.+...    |++++.+.||.+.++
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----g~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       145 LSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDR----GLPVTIVRPGRILGN  197 (367)
T ss_pred             CCCccccccccccccccCCChHHHHHHHHHHHHHHHhc----CCCEEEECCCceeec
Confidence                           11347999999999988765442    899999999999886

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.58  E-value=8.6e-14  Score=117.18  Aligned_cols=162  Identities=15%  Similarity=0.157  Sum_probs=117.3

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHHHhhCCCceEEEeecC-CHHHHHHHHHhcCCccEEEEccC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQ-DWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.++||||+|.||++++++|+++ |++|+.++|+......+.. .+.+.++.+|++ +.+.+.++++   ++|+|||+|+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~---~~d~ViH~aa   77 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN-HPRMHFFEGDITINKEWIEYHVK---KCDVILPLVA   77 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc-CCCeEEEeCCCCCCHHHHHHHHc---CCCEEEECcc
Confidence            35889999999999999999986 6899999987765444332 235889999998 6676666665   5899999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc------------C------CCC
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA------------L------EGH  152 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~------~~~  152 (238)
                      ...+.... .+    -+..+++|+.++..+++++..    .+  .++|++||....-.            .      ++.
T Consensus        78 ~~~~~~~~-~~----p~~~~~~n~~~~~~ll~aa~~----~~--~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~  146 (347)
T PRK11908         78 IATPATYV-KQ----PLRVFELDFEANLPIVRSAVK----YG--KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPR  146 (347)
T ss_pred             cCChHHhh-cC----cHHHHHHHHHHHHHHHHHHHh----cC--CeEEEEecceeeccCCCcCcCccccccccCcCCCcc
Confidence            75432211 11    244568999999988888753    22  48999999642110            0      122


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      ..|+.+|.+.+.+++.++...   ++.+..+.|+.+..+.
T Consensus       147 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilR~~~v~Gp~  183 (347)
T PRK11908        147 WIYACSKQLMDRVIWAYGMEE---GLNFTLFRPFNWIGPG  183 (347)
T ss_pred             chHHHHHHHHHHHHHHHHHHc---CCCeEEEeeeeeeCCC
Confidence            379999999999998876553   6777888888877664

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.55  E-value=9.2e-14  Score=126.14  Aligned_cols=164  Identities=17%  Similarity=0.150  Sum_probs=120.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHH-HHHHHHhcCCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWAR-TRAAVSKVGPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~g~id~li~~   88 (238)
                      +.+.++||||+|.||++++++|+++ |++|+.++|+......... .++++++.+|++|.++ ++++++   ++|+|||+
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~-~~~~~~~~gDl~d~~~~l~~~l~---~~D~ViHl  389 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG-HPRFHFVEGDISIHSEWIEYHIK---KCDVVLPL  389 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC-CCceEEEeccccCcHHHHHHHhc---CCCEEEEC
Confidence            4556899999999999999999985 7999999998765433322 2358889999998655 455554   58999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----cC-------------C
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----AL-------------E  150 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----~~-------------~  150 (238)
                      |+...+.... .+    ....+++|+.++..+++++...    +  .++|++||....-     +.             .
T Consensus       390 Aa~~~~~~~~-~~----~~~~~~~Nv~~t~~ll~a~~~~----~--~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~  458 (660)
T PRK08125        390 VAIATPIEYT-RN----PLRVFELDFEENLKIIRYCVKY----N--KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINK  458 (660)
T ss_pred             ccccCchhhc-cC----HHHHHHhhHHHHHHHHHHHHhc----C--CeEEEEcchhhcCCCCCCCcCccccccccCCCCC
Confidence            9976432211 11    2345789999999999988642    2  4899999954211     00             1


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        151 GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       151 ~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      +...|+.||.+.+.+++.++..+   |+++..+.|+.+..|.
T Consensus       459 p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~  497 (660)
T PRK08125        459 QRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGPR  497 (660)
T ss_pred             CccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCCC
Confidence            12369999999999998876654   6889999999988774

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.55  E-value=1.2e-13  Score=114.33  Aligned_cols=201  Identities=21%  Similarity=0.159  Sum_probs=139.1

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARF   94 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~   94 (238)
                      ++||||+|.||.+++++|.+.|++|+.++|.........   .++.++.+|+++.+...+.++...  |.+||+|+....
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~--d~vih~aa~~~~   77 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---SGVEFVVLDLTDRDLVDELAKGVP--DAVIHLAAQSSV   77 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---cccceeeecccchHHHHHHHhcCC--CEEEEccccCch
Confidence            789999999999999999999999999999876654433   567889999999877777766543  999999997643


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-------------CCCCchhhHHHHH
Q psy14567         95 DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-------------LEGHTIYSASKAA  161 (238)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------~~~~~~y~~sK~a  161 (238)
                      ..... +  + ....+++|+.++..+++++..    .+ ..++|+.||.....+             ..+...|+.+|.+
T Consensus        78 ~~~~~-~--~-~~~~~~~nv~gt~~ll~aa~~----~~-~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~  148 (314)
T COG0451          78 PDSNA-S--D-PAEFLDVNVDGTLNLLEAARA----AG-VKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLA  148 (314)
T ss_pred             hhhhh-h--C-HHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHH
Confidence            22111 1  2 345678999999999999865    22 458888666443221             1112259999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC---CCccCCcccCCC---C-------CCcCCCCCcccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD---PAKAGPMLAKTP---L-------GRFAGKLKPKPWNRWL  228 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~~---~-------~r~~~~~~ia~~~~~l  228 (238)
                      .+.+++....   ..|+.+..+.|+.+-.+........   ..+........|   .       .-+...+|+++++..+
T Consensus       149 ~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~  225 (314)
T COG0451         149 AEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLA  225 (314)
T ss_pred             HHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHH
Confidence            9999998887   4578999999998887765432111   000100111111   1       1245577788887777


Q ss_pred             cccc
Q psy14567        229 LPSV  232 (238)
Q Consensus       229 ~s~~  232 (238)
                      +...
T Consensus       226 ~~~~  229 (314)
T COG0451         226 LENP  229 (314)
T ss_pred             HhCC
Confidence            7654

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.54  E-value=2.6e-13  Score=115.20  Aligned_cols=164  Identities=15%  Similarity=0.044  Sum_probs=118.6

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      .+.++||||+|.||++++++|.++|++|+.++|.....  .........++.+|+++.+.+.++++   ++|+|||+|+.
T Consensus        21 ~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~D~Vih~Aa~   95 (370)
T PLN02695         21 KLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH--MSEDMFCHEFHLVDLRVMENCLKVTK---GVDHVFNLAAD   95 (370)
T ss_pred             CCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc--cccccccceEEECCCCCHHHHHHHHh---CCCEEEEcccc
Confidence            34678999999999999999999999999999865321  11111125678899999888777765   47999999986


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-----------------ccCCCCch
Q psy14567         92 ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-----------------TALEGHTI  154 (238)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------------~~~~~~~~  154 (238)
                      .........+    ....+..|+.++..+++++..    .+ ..++|++||....                 .+..+...
T Consensus        96 ~~~~~~~~~~----~~~~~~~N~~~t~nll~aa~~----~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~  166 (370)
T PLN02695         96 MGGMGFIQSN----HSVIMYNNTMISFNMLEAARI----NG-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA  166 (370)
T ss_pred             cCCccccccC----chhhHHHHHHHHHHHHHHHHH----hC-CCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCH
Confidence            5322221111    123356899999999888743    22 3589999986321                 02234568


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      |+.+|.+.+.+++.++..+   |+++..+.|+.+..|-
T Consensus       167 Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~  201 (370)
T PLN02695        167 YGLEKLATEELCKHYTKDF---GIECRIGRFHNIYGPF  201 (370)
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCCEEEEEECCccCCC
Confidence            9999999999998876653   7889999999988874

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.54  E-value=2.6e-13  Score=123.58  Aligned_cols=168  Identities=18%  Similarity=0.117  Sum_probs=121.7

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhC--CCEEEEecCCh--HhHHHHHh--hCCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQH--EAIIIALSKTQ--ANLDSLKQ--AFPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~--G~~V~~~~r~~--~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      .+.++||||+|.||++++++|.++  |++|+.++|..  +....+..  ..+++.++.+|++|.+.+.+++.. .++|+|
T Consensus         6 ~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-~~~D~V   84 (668)
T PLN02260          6 PKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT-EGIDTI   84 (668)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhh-cCCCEE
Confidence            456899999999999999999987  67899888753  23333322  134688999999999887776543 369999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc--------------cCCC
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT--------------ALEG  151 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------~~~~  151 (238)
                      ||+|+.......    ..+ ....+++|+.++..+++++...    +...++|++||....-              +..+
T Consensus        85 iHlAa~~~~~~~----~~~-~~~~~~~Nv~gt~~ll~a~~~~----~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p  155 (668)
T PLN02260         85 MHFAAQTHVDNS----FGN-SFEFTKNNIYGTHVLLEACKVT----GQIRRFIHVSTDEVYGETDEDADVGNHEASQLLP  155 (668)
T ss_pred             EECCCccCchhh----hhC-HHHHHHHHHHHHHHHHHHHHhc----CCCcEEEEEcchHHhCCCccccccCccccCCCCC
Confidence            999997643211    111 2445689999999998887532    2135899999964211              1123


Q ss_pred             CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        152 HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       152 ~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      ...|+.+|.+.+.+++.+..++   ++.+..+.|+.+..+-
T Consensus       156 ~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~  193 (668)
T PLN02260        156 TNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPN  193 (668)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcC
Confidence            5689999999999999877654   6888889999887764

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.53  E-value=1.4e-13  Score=113.89  Aligned_cols=156  Identities=17%  Similarity=0.149  Sum_probs=107.2

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh------cCCccEEEEc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK------VGPVDVLINN   88 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~------~g~id~li~~   88 (238)
                      ++||||+|.||++++++|++.|++++++.|+.+.....      .....+|+.|..+.+++++.      ++++|+|||+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~   75 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHE   75 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEEC
Confidence            68999999999999999999999766665554322111      11234566665544444432      3579999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCCCchhhH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEGHTIYSA  157 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~y~~  157 (238)
                      ||.....   +.+.    +..++.|+.++..+++++..    .+  .++|++||.....           +..+...|+.
T Consensus        76 A~~~~~~---~~~~----~~~~~~n~~~t~~ll~~~~~----~~--~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~  142 (308)
T PRK11150         76 GACSSTT---EWDG----KYMMDNNYQYSKELLHYCLE----RE--IPFLYASSAATYGGRTDDFIEEREYEKPLNVYGY  142 (308)
T ss_pred             ceecCCc---CCCh----HHHHHHHHHHHHHHHHHHHH----cC--CcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHH
Confidence            9865322   1121    33578999999999988753    22  3799999964311           1224468999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      +|.+.+.+++.+..+   .++.+..+.|+.+-.+-
T Consensus       143 sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~  174 (308)
T PRK11150        143 SKFLFDEYVRQILPE---ANSQICGFRYFNVYGPR  174 (308)
T ss_pred             HHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCC
Confidence            999999998877654   36888888888887764

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.53  E-value=4.5e-13  Score=109.75  Aligned_cols=142  Identities=23%  Similarity=0.254  Sum_probs=109.1

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARF   94 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~   94 (238)
                      ++||||+|.||.+++++|.+.|++|++++|+                 .+|+.++++++++++.. ++|++||+||....
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------~~d~~~~~~~~~~~~~~-~~d~vi~~a~~~~~   63 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------QLDLTDPEALERLLRAI-RPDAVVNTAAYTDV   63 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------ccCCCCHHHHHHHHHhC-CCCEEEECCccccc
Confidence            5789999999999999999999999999885                 47999999999988765 58999999986532


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCCCchhhHHHHHHH
Q psy14567         95 DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEGHTIYSASKAALD  163 (238)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~y~~sK~al~  163 (238)
                      ..    .... ....+++|+.++..+++++..    .+  .++|++||.....           +..+...|+.+|.+.+
T Consensus        64 ~~----~~~~-~~~~~~~n~~~~~~l~~~~~~----~~--~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E  132 (287)
T TIGR01214        64 DG----AESD-PEKAFAVNALAPQNLARAAAR----HG--ARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGE  132 (287)
T ss_pred             cc----cccC-HHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHH
Confidence            21    1112 455678999999999888743    22  4899999854211           1123568999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      .+++.+       +.++..+.|+.+..+.
T Consensus       133 ~~~~~~-------~~~~~ilR~~~v~G~~  154 (287)
T TIGR01214       133 QAIRAA-------GPNALIVRTSWLYGGG  154 (287)
T ss_pred             HHHHHh-------CCCeEEEEeeecccCC
Confidence            888765       3467888999887665

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.52  E-value=4.6e-13  Score=111.00  Aligned_cols=161  Identities=12%  Similarity=0.061  Sum_probs=111.5

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHH-hcCCccEEEEccCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS-KVGPVDVLINNAAVA   92 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~-~~g~id~li~~ag~~   92 (238)
                      ++||||+|.||.++++.|.+.|+ .|++++|..... .+.+. . ...+..|+.+++.++.+.+ .++++|+|||+|+..
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~-~-~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~   77 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNL-A-DLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACS   77 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhh-h-heeeeccCcchhHHHHHHhhccCCCCEEEECcccc
Confidence            57999999999999999999998 788887654321 12111 1 1345678888777776665 346799999999964


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc----------c-CCCCchhhHHHHH
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT----------A-LEGHTIYSASKAA  161 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~-~~~~~~y~~sK~a  161 (238)
                      ...      .++ .+..+++|+.++..+++++..    .+  .++|++||.....          + ..+...|+.+|.+
T Consensus        78 ~~~------~~~-~~~~~~~n~~~~~~ll~~~~~----~~--~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~  144 (314)
T TIGR02197        78 DTT------ETD-GEYMMENNYQYSKRLLDWCAE----KG--IPFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFL  144 (314)
T ss_pred             Ccc------ccc-hHHHHHHHHHHHHHHHHHHHH----hC--CcEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHH
Confidence            311      122 456678999999999988754    22  4799999964321          0 1245689999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      .+.+++....+.. .++++..+.|+.+..+-
T Consensus       145 ~e~~~~~~~~~~~-~~~~~~~lR~~~vyG~~  174 (314)
T TIGR02197       145 FDQYVRRRVLPEA-LSAQVVGLRYFNVYGPR  174 (314)
T ss_pred             HHHHHHHHhHhhc-cCCceEEEEEeeccCCC
Confidence            9999976432221 24677777887776654

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>KOG4022|consensus

Probab=99.51  E-value=7e-13  Score=96.23  Aligned_cols=180  Identities=14%  Similarity=0.092  Sum_probs=129.2

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc------CCccEEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV------GPVDVLI   86 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~------g~id~li   86 (238)
                      ..++|-||-|-+|.+++..|..+++.|.-++-.+....+      .-..+..|-+=-|+-+.+++++      .++|.++
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad------~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~   77 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD------SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF   77 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc------ceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence            345667999999999999999999999888766543111      1123334433334444455554      3699999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      +.||.+.-+.-...+.-...+-|++..++......+.+..+++.   +|.+-..+.-++.-+.|+...|+.+|+|+.+++
T Consensus        78 CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~---GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt  154 (236)
T KOG4022|consen   78 CVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP---GGLLQLTGAKAALGGTPGMIGYGMAKAAVHQLT  154 (236)
T ss_pred             EeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC---CceeeecccccccCCCCcccchhHHHHHHHHHH
Confidence            99998754433333321125667777777777666777777653   466666677777778999999999999999999


Q ss_pred             HHHHHHhC--CCCeEEEEEeCCceecCcccCCCCCCC
Q psy14567        167 RTMALELG--PYNIRVNSVQPTVVMTQMGRTGWSDPA  201 (238)
Q Consensus       167 ~~l~~~~~--~~~i~v~~i~PG~v~t~~~~~~~~~~~  201 (238)
                      ++|+.+-.  +.|-.+..|.|=..+|||++++.+..+
T Consensus       155 ~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~AD  191 (236)
T KOG4022|consen  155 SSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNAD  191 (236)
T ss_pred             HHhcccccCCCCCceeEEEeeeeccCccccccCCCCc
Confidence            99987653  568889999999999999998765544

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.51  E-value=7.1e-13  Score=109.46  Aligned_cols=187  Identities=17%  Similarity=0.057  Sum_probs=127.5

Q ss_pred             CCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCCC
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFD   95 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~~   95 (238)
                      +||||+|.||.++++.|.+.|++|+++.+.                ..+|+++.++++++++.. ++|+|||+|+.....
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------~~~Dl~~~~~l~~~~~~~-~~d~Vih~A~~~~~~   63 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------KELDLTRQADVEAFFAKE-KPTYVILAAAKVGGI   63 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------ccCCCCCHHHHHHHHhcc-CCCEEEEeeeeeccc
Confidence            589999999999999999999987765432                148999999999988875 479999999875311


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc---------------cCCC-CchhhHHH
Q psy14567         96 RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT---------------ALEG-HTIYSASK  159 (238)
Q Consensus        96 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------~~~~-~~~y~~sK  159 (238)
                      .....+    ....+++|+.++..+++++...    + -.++|++||..-..               +..+ ...|+.+|
T Consensus        64 ~~~~~~----~~~~~~~n~~~~~~ll~~~~~~----~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK  134 (306)
T PLN02725         64 HANMTY----PADFIRENLQIQTNVIDAAYRH----G-VKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAK  134 (306)
T ss_pred             chhhhC----cHHHHHHHhHHHHHHHHHHHHc----C-CCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHH
Confidence            111111    2344778999999998888542    2 35899998864211               1111 23599999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC----CCcc----------CC----cccCCCCCCcCCCCCc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD----PAKA----------GP----MLAKTPLGRFAGKLKP  221 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~----~~~~----------~~----~~~~~~~~r~~~~~~i  221 (238)
                      .+.+.+++.+..+.   ++++..+.|+.+-.+........    +...          ..    .....+...+...+|+
T Consensus       135 ~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  211 (306)
T PLN02725        135 IAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDL  211 (306)
T ss_pred             HHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHH
Confidence            99999888876554   68899999999987753110000    0000          00    1122334467888899


Q ss_pred             cccccccccc
Q psy14567        222 KPWNRWLLPS  231 (238)
Q Consensus       222 a~~~~~l~s~  231 (238)
                      +++++.++..
T Consensus       212 ~~~~~~~~~~  221 (306)
T PLN02725        212 ADAVVFLMRR  221 (306)
T ss_pred             HHHHHHHHhc
Confidence            9999888764

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.50  E-value=3.7e-13  Score=111.06  Aligned_cols=131  Identities=18%  Similarity=0.101  Sum_probs=97.6

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      .++||||+|.||++++++|.+.| +|+.++|...             .+..|++|.+++.++++.. ++|+|||+|+...
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------~~~~Dl~d~~~~~~~~~~~-~~D~Vih~Aa~~~   66 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------DYCGDFSNPEGVAETVRKI-RPDVIVNAAAHTA   66 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------cccCCCCCHHHHHHHHHhc-CCCEEEECCccCC
Confidence            37899999999999999999999 7888887531             2457999999999988865 5899999999764


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-----------ccCCCCchhhHHHHHH
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-----------TALEGHTIYSASKAAL  162 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~~~y~~sK~al  162 (238)
                      ... .+.+    -+..+++|+.++..+++++..    .+  .++|++||..-.           .+..+...|+.+|.+.
T Consensus        67 ~~~-~~~~----~~~~~~~N~~~~~~l~~aa~~----~g--~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~  135 (299)
T PRK09987         67 VDK-AESE----PEFAQLLNATSVEAIAKAANE----VG--AWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAG  135 (299)
T ss_pred             cch-hhcC----HHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHH
Confidence            321 1111    234467999999999988754    22  479999884321           1223456899999999


Q ss_pred             HHHHHHHH
Q psy14567        163 DSITRTMA  170 (238)
Q Consensus       163 ~~l~~~l~  170 (238)
                      +.+++...
T Consensus       136 E~~~~~~~  143 (299)
T PRK09987        136 EKALQEHC  143 (299)
T ss_pred             HHHHHHhC
Confidence            99887653

>KOG1371|consensus

Probab=99.49  E-value=9.9e-13  Score=105.76  Aligned_cols=152  Identities=21%  Similarity=0.182  Sum_probs=115.7

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC----ChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK----TQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      ...+++|||+|-||.|++.+|.+.|+.|++++-    ..+++..+++..   ..+.+++.|++|.+.++++++.+. +|.
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~-fd~   80 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVK-FDA   80 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcC-Cce
Confidence            346788999999999999999999999998863    233444444433   469999999999999999999884 999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-----------ccCC-CC
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-----------TALE-GH  152 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~-~~  152 (238)
                      |+|-|+........    ++ -...++.|+.+++.++..+..+-     -..+|+.||..-.           .+.. +.
T Consensus        81 V~Hfa~~~~vgeS~----~~-p~~Y~~nNi~gtlnlLe~~~~~~-----~~~~V~sssatvYG~p~~ip~te~~~t~~p~  150 (343)
T KOG1371|consen   81 VMHFAALAAVGESM----EN-PLSYYHNNIAGTLNLLEVMKAHN-----VKALVFSSSATVYGLPTKVPITEEDPTDQPT  150 (343)
T ss_pred             EEeehhhhccchhh----hC-chhheehhhhhHHHHHHHHHHcC-----CceEEEecceeeecCcceeeccCcCCCCCCC
Confidence            99999876433221    22 34457899999999998876544     3478888875531           1222 67


Q ss_pred             chhhHHHHHHHHHHHHHHHHhC
Q psy14567        153 TIYSASKAALDSITRTMALELG  174 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~  174 (238)
                      ..|+.+|.+++..+++....+.
T Consensus       151 ~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  151 NPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CcchhhhHHHHHHHHhhhcccc
Confidence            8999999999999999877665

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.48  E-value=2.6e-13  Score=103.84  Aligned_cols=173  Identities=16%  Similarity=0.106  Sum_probs=120.1

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARF   94 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~   94 (238)
                      |+|+||||.+|..++++|.++|++|.++.|++++.++    .++++++++|+.|++++.+.++   +.|.+|+++|....
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----~~~~~~~~~d~~d~~~~~~al~---~~d~vi~~~~~~~~   73 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----SPGVEIIQGDLFDPDSVKAALK---GADAVIHAAGPPPK   73 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----CTTEEEEESCTTCHHHHHHHHT---TSSEEEECCHSTTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----ccccccceeeehhhhhhhhhhh---hcchhhhhhhhhcc
Confidence            4689999999999999999999999999999998877    5689999999999999888887   57999999975432


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCC---------CchhhHHHHHHHHH
Q psy14567         95 DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEG---------HTIYSASKAALDSI  165 (238)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~---------~~~y~~sK~al~~l  165 (238)
                               +             ...++.++..+++.+ ..+++++|+.......+.         ...|...|...+.+
T Consensus        74 ---------~-------------~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~  130 (183)
T PF13460_consen   74 ---------D-------------VDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEA  130 (183)
T ss_dssp             ---------H-------------HHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHH
T ss_pred             ---------c-------------ccccccccccccccc-cccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHH
Confidence                     0             222234444444444 569999998876543322         12455666555443


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s  230 (238)
                      .       ...+++...+.|+.+..+...    .......  .........+.+|+|++++.++.
T Consensus       131 ~-------~~~~~~~~ivrp~~~~~~~~~----~~~~~~~--~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  131 L-------RESGLNWTIVRPGWIYGNPSR----SYRLIKE--GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             H-------HHSTSEEEEEEESEEEBTTSS----SEEEESS--TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             H-------HhcCCCEEEEECcEeEeCCCc----ceeEEec--cCCCCcCcCCHHHHHHHHHHHhC
Confidence            3       123799999999999887532    1111111  11122245677888887776553

...

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.46  E-value=4.4e-12  Score=102.57  Aligned_cols=179  Identities=15%  Similarity=0.108  Sum_probs=142.8

Q ss_pred             cCCCCCCCC-CCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhc----C-----
Q psy14567         12 TNTKGGDYP-KPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV----G-----   80 (238)
Q Consensus        12 ~~v~~itG~-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~----g-----   80 (238)
                      ..+++|-|. +-.|++.+|..|-++|+.|+++..+.++.+.++++. .++.....|..++.++...+.++    .     
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p   82 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVP   82 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCC
Confidence            346677774 789999999999999999999999999888877765 35777777886665555544433    1     


Q ss_pred             ---------CccEEEEccCC-CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCce-EEEEcccccccc
Q psy14567         81 ---------PVDVLINNAAV-ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK-IQGS-IVNVSSIAGKTA  148 (238)
Q Consensus        81 ---------~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~-iv~isS~~~~~~  148 (238)
                               .+..+|..... .+.+++.+++.++ |...++.|+..++.+++.++|+++.+. .+.+ |++.-|+.+...
T Consensus        83 ~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~-~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~  161 (299)
T PF08643_consen   83 FPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSS-WADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLN  161 (299)
T ss_pred             CCCCCCceeEEEEEEEecCCCCCCCCccccCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccC
Confidence                     24455544432 2557788888887 999999999999999999999998821 1345 455568888888


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecC
Q psy14567        149 LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ  191 (238)
Q Consensus       149 ~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~  191 (238)
                      .+.+..-....+++.+|+.+|++|+.+++|.|..+.-|.++-.
T Consensus       162 ~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  162 PPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            8999999999999999999999999999999999999999876

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.44  E-value=3.3e-12  Score=106.31  Aligned_cols=187  Identities=12%  Similarity=0.045  Sum_probs=123.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      .++||||||.||++++++|.+.|++|.+++|+.++...+..  .+++++.+|++|++++.++++   .+|++||+++...
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~--~~v~~v~~Dl~d~~~l~~al~---g~d~Vi~~~~~~~   76 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE--WGAELVYGDLSLPETLPPSFK---GVTAIIDASTSRP   76 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh--cCCEEEECCCCCHHHHHHHHC---CCCEEEECCCCCC
Confidence            36889999999999999999999999999999876544432  368899999999999888877   4799999876321


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHHh
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL  173 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~  173 (238)
                      .      +    .....++|+.++..+++++..    .+ -.++|++||..+..  .+...|..+|...+.+.+.     
T Consensus        77 ~------~----~~~~~~~~~~~~~~l~~aa~~----~g-vkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~l~~-----  134 (317)
T CHL00194         77 S------D----LYNAKQIDWDGKLALIEAAKA----AK-IKRFIFFSILNAEQ--YPYIPLMKLKSDIEQKLKK-----  134 (317)
T ss_pred             C------C----ccchhhhhHHHHHHHHHHHHH----cC-CCEEEEeccccccc--cCCChHHHHHHHHHHHHHH-----
Confidence            1      1    122346788888888887753    33 34899999865432  1235688888887766532     


Q ss_pred             CCCCeEEEEEeCCceecCcccCCCCCCCcc-CCc---ccCCCCCCcCCCCCccccccccccc
Q psy14567        174 GPYNIRVNSVQPTVVMTQMGRTGWSDPAKA-GPM---LAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       174 ~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~-~~~---~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                        .++....+.|+.+...+..... .+-.. ...   ....+. -+...+|+|+++..++.+
T Consensus       135 --~~l~~tilRp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~i~v~Dva~~~~~~l~~  192 (317)
T CHL00194        135 --SGIPYTIFRLAGFFQGLISQYA-IPILEKQPIWITNESTPI-SYIDTQDAAKFCLKSLSL  192 (317)
T ss_pred             --cCCCeEEEeecHHhhhhhhhhh-hhhccCCceEecCCCCcc-CccCHHHHHHHHHHHhcC
Confidence              3678888888865433211110 00000 000   011111 234568888888776653

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.43  E-value=3.2e-12  Score=110.66  Aligned_cols=158  Identities=12%  Similarity=0.103  Sum_probs=111.0

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-HHHHHhh--CCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-LDSLKQA--FPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.++||||+|.||++++++|.++|++|++++|.... .+.+...  .++++++..|+.++.     +.   .+|+|||+|
T Consensus       120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l~---~~D~ViHlA  191 (442)
T PLN02206        120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----LL---EVDQIYHLA  191 (442)
T ss_pred             CEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----hc---CCCEEEEee
Confidence            458999999999999999999999999998765321 1122111  235777888887652     22   489999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc----------------cCCCCc
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT----------------ALEGHT  153 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~~~~  153 (238)
                      +...+... +.+    -...+++|+.++..+++++..    .+  .++|++||.....                +.....
T Consensus       192 a~~~~~~~-~~~----p~~~~~~Nv~gt~nLleaa~~----~g--~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s  260 (442)
T PLN02206        192 CPASPVHY-KFN----PVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRS  260 (442)
T ss_pred             eecchhhh-hcC----HHHHHHHHHHHHHHHHHHHHH----hC--CEEEEECChHHhCCCCCCCCCccccccCCCCCccc
Confidence            86543211 112    245678999999999998853    22  3899999975321                112245


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      .|+.+|.+.+.+++.+...+   ++++..+.|+.+..+.
T Consensus       261 ~Y~~SK~~aE~~~~~y~~~~---g~~~~ilR~~~vyGp~  296 (442)
T PLN02206        261 CYDEGKRTAETLTMDYHRGA---NVEVRIARIFNTYGPR  296 (442)
T ss_pred             hHHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCC
Confidence            79999999999998776553   6777888887776653

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.43  E-value=3.4e-12  Score=110.33  Aligned_cols=159  Identities=11%  Similarity=0.087  Sum_probs=111.0

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-HHHHHhh--CCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-LDSLKQA--FPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      ...++||||+|.||++++++|.++|++|++++|.... .+.+...  .+.++++..|+.+..     +   .++|+|||+
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~---~~~D~ViHl  191 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----L---LEVDQIYHL  191 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----c---cCCCEEEEC
Confidence            3458999999999999999999999999999875321 1122111  235677888886542     2   258999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc----------------cCCCC
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT----------------ALEGH  152 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~~~  152 (238)
                      |+....... ..+    -...+++|+.++..+++++...    +  .++|++||....-                +..+.
T Consensus       192 Aa~~~~~~~-~~~----p~~~~~~Nv~gT~nLleaa~~~----g--~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~  260 (436)
T PLN02166        192 ACPASPVHY-KYN----PVKTIKTNVMGTLNMLGLAKRV----G--ARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGER  260 (436)
T ss_pred             ceeccchhh-ccC----HHHHHHHHHHHHHHHHHHHHHh----C--CEEEEECcHHHhCCCCCCCCCccccccCCCCCCC
Confidence            986543221 112    2455789999999999888542    2  3899998865211                11224


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      ..|+.+|.+.+.+++.+....   ++.+..+.|+.+..+.
T Consensus       261 s~Yg~SK~~aE~~~~~y~~~~---~l~~~ilR~~~vYGp~  297 (436)
T PLN02166        261 SCYDEGKRTAETLAMDYHRGA---GVEVRIARIFNTYGPR  297 (436)
T ss_pred             CchHHHHHHHHHHHHHHHHHh---CCCeEEEEEccccCCC
Confidence            579999999999998876553   6777777777776654

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.39  E-value=2.3e-11  Score=97.83  Aligned_cols=157  Identities=20%  Similarity=0.242  Sum_probs=98.1

Q ss_pred             CCCCCCchHHHHHHHHhhCCC--EEEEecCChHh---HHHHHh--------------hCCCceEEEeecCCH------HH
Q psy14567         17 GDYPKPGIGRCIVEKLSQHEA--IIIALSKTQAN---LDSLKQ--------------AFPNVQTVQVDLQDW------AR   71 (238)
Q Consensus        17 itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~---~~~~~~--------------~~~~~~~~~~D~~~~------~~   71 (238)
                      +|||||.||.++.++|++.+.  +|+.+.|..+.   .+.+.+              ....++++..|++++      ++
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            599999999999999998876  99999997632   223311              245799999999985      33


Q ss_pred             HHHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc--c-
Q psy14567         72 TRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT--A-  148 (238)
Q Consensus        72 v~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~-  148 (238)
                      .+.+.+   .+|++||||+......    +    ++...++|+.|+..+++.+.    ..+ ..+++++||.....  . 
T Consensus        81 ~~~L~~---~v~~IiH~Aa~v~~~~----~----~~~~~~~NV~gt~~ll~la~----~~~-~~~~~~iSTa~v~~~~~~  144 (249)
T PF07993_consen   81 YQELAE---EVDVIIHCAASVNFNA----P----YSELRAVNVDGTRNLLRLAA----QGK-RKRFHYISTAYVAGSRPG  144 (249)
T ss_dssp             HHHHHH---H--EEEE--SS-SBS-----S------EEHHHHHHHHHHHHHHHT----SSS----EEEEEEGGGTTS-TT
T ss_pred             hhcccc---ccceeeecchhhhhcc----c----chhhhhhHHHHHHHHHHHHH----hcc-CcceEEeccccccCCCCC
Confidence            444544   4799999998764322    1    34456799999999988875    222 33899999932110  1 


Q ss_pred             -----------------CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        149 -----------------LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       149 -----------------~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                                       ......|..||...|.+++..+.+   .|+.+..+.||.+-..-
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g~~  202 (249)
T PF07993_consen  145 TIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVGDS  202 (249)
T ss_dssp             T--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-SS
T ss_pred             cccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCcccccC
Confidence                             112359999999999999988766   36889999999998743

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.37  E-value=2.9e-11  Score=110.14  Aligned_cols=155  Identities=22%  Similarity=0.236  Sum_probs=112.0

Q ss_pred             CCCCCCCCCchHHHHHHHHh--hCCCEEEEecCChHh--HHHHHhhC--CCceEEEeecCCH------HHHHHHHHhcCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLS--QHEAIIIALSKTQAN--LDSLKQAF--PNVQTVQVDLQDW------ARTRAAVSKVGP   81 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~--~~G~~V~~~~r~~~~--~~~~~~~~--~~~~~~~~D~~~~------~~v~~~~~~~g~   81 (238)
                      +++||||||.||++++++|+  ..|.+|++++|+...  ++.+....  ++++++.+|++|+      +.++++    .+
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~~   77 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----GD   77 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----cC
Confidence            47899999999999999999  589999999996532  33333222  4688899999984      333333    46


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-------------
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-------------  148 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------  148 (238)
                      +|++||+||.....    .+    .....++|+.++..+++++..    .+ ..++|++||......             
T Consensus        78 ~D~Vih~Aa~~~~~----~~----~~~~~~~nv~gt~~ll~~a~~----~~-~~~~v~~SS~~v~g~~~~~~~e~~~~~~  144 (657)
T PRK07201         78 IDHVVHLAAIYDLT----AD----EEAQRAANVDGTRNVVELAER----LQ-AATFHHVSSIAVAGDYEGVFREDDFDEG  144 (657)
T ss_pred             CCEEEECceeecCC----CC----HHHHHHHHhHHHHHHHHHHHh----cC-CCeEEEEeccccccCccCccccccchhh
Confidence            89999999965321    11    234567899999888888753    22 358999998754211             


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecC
Q psy14567        149 LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ  191 (238)
Q Consensus       149 ~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~  191 (238)
                      ......|+.+|...+.+++.      ..++++..+.|+.+-.+
T Consensus       145 ~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~  181 (657)
T PRK07201        145 QGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGD  181 (657)
T ss_pred             cCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeec
Confidence            11235799999999988753      24789999999999765

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.33  E-value=2.8e-11  Score=97.14  Aligned_cols=126  Identities=21%  Similarity=0.253  Sum_probs=101.1

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARF   94 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~   94 (238)
                      ++|||++|-+|.++++.|. .+..|+.++|.+                 +|++|++.+.+++.+. +||+|||+|++...
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------~Ditd~~~v~~~i~~~-~PDvVIn~AAyt~v   63 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------LDITDPDAVLEVIRET-RPDVVINAAAYTAV   63 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------ccccChHHHHHHHHhh-CCCEEEECcccccc
Confidence            7899999999999999999 778999888876                 8999999999999887 79999999998754


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccc---ccc--------cCCCCchhhHHHHHHH
Q psy14567         95 DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIA---GKT--------ALEGHTIYSASKAALD  163 (238)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~---~~~--------~~~~~~~y~~sK~al~  163 (238)
                      ..- +.+    -+..+.+|..++.++.+++...      +..+|++|+-.   |..        ...+...|+.||.+.+
T Consensus        64 D~a-E~~----~e~A~~vNa~~~~~lA~aa~~~------ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE  132 (281)
T COG1091          64 DKA-ESE----PELAFAVNATGAENLARAAAEV------GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGE  132 (281)
T ss_pred             ccc-cCC----HHHHHHhHHHHHHHHHHHHHHh------CCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHH
Confidence            322 222    3566899999999999998532      46899998733   222        2345679999999999


Q ss_pred             HHHHHHH
Q psy14567        164 SITRTMA  170 (238)
Q Consensus       164 ~l~~~l~  170 (238)
                      ..++...
T Consensus       133 ~~v~~~~  139 (281)
T COG1091         133 EAVRAAG  139 (281)
T ss_pred             HHHHHhC
Confidence            9887654

>PRK05865 hypothetical protein; Provisional

Probab=99.32  E-value=3.8e-11  Score=110.14  Aligned_cols=169  Identities=12%  Similarity=0.081  Sum_probs=115.4

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      .++||||+|+||++++++|+++|++|++++|+....  .   ..++.++.+|++|.+++.++++   ++|++||+|+...
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~--~---~~~v~~v~gDL~D~~~l~~al~---~vD~VVHlAa~~~   73 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS--W---PSSADFIAADIRDATAVESAMT---GADVVAHCAWVRG   73 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh--c---ccCceEEEeeCCCHHHHHHHHh---CCCEEEECCCccc
Confidence            368999999999999999999999999999975431  1   1257889999999999988887   4899999997542


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHHh
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL  173 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~  173 (238)
                      .              .+++|+.++..+++++.    +.+ .+++|++||..              |.+.+.+++.     
T Consensus        74 ~--------------~~~vNv~GT~nLLeAa~----~~g-vkr~V~iSS~~--------------K~aaE~ll~~-----  115 (854)
T PRK05865         74 R--------------NDHINIDGTANVLKAMA----ETG-TGRIVFTSSGH--------------QPRVEQMLAD-----  115 (854)
T ss_pred             c--------------hHHHHHHHHHHHHHHHH----HcC-CCeEEEECCcH--------------HHHHHHHHHH-----
Confidence            1              24688999887776654    333 46899999863              7777766632     


Q ss_pred             CCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCC--CCcCCCCCcccccccccc
Q psy14567        174 GPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPL--GRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       174 ~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~ia~~~~~l~s  230 (238)
                        .++.+..+.|+.+..+-.......-............  .-+...+|+++++..++.
T Consensus       116 --~gl~~vILRp~~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~  172 (854)
T PRK05865        116 --CGLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALL  172 (854)
T ss_pred             --cCCCEEEEEeceEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHh
Confidence              3788888899888766311100000000000000111  125677888888877664

>PLN02996 fatty acyl-CoA reductase

Probab=99.30  E-value=4.8e-11  Score=104.71  Aligned_cols=163  Identities=18%  Similarity=0.232  Sum_probs=113.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCC---CEEEEecCChH------hHH-HH---------HhhC---------CCceEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHE---AIIIALSKTQA------NLD-SL---------KQAF---------PNVQTV   62 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G---~~V~~~~r~~~------~~~-~~---------~~~~---------~~~~~~   62 (238)
                      +.++++||||||.||.+++..|++.+   .+|+++.|...      +++ ++         .+..         ..+.++
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i   89 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV   89 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence            45678999999999999999998754   26788888653      111 11         1111         357889


Q ss_pred             EeecC-------CHHHHHHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Q psy14567         63 QVDLQ-------DWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG  135 (238)
Q Consensus        63 ~~D~~-------~~~~v~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g  135 (238)
                      ..|++       +.+.++++++   .+|+|||+|+.....       ++ .+..+++|+.++..+++++...-   + -.
T Consensus        90 ~GDl~~~~LGLs~~~~~~~l~~---~vD~ViH~AA~v~~~-------~~-~~~~~~~Nv~gt~~ll~~a~~~~---~-~k  154 (491)
T PLN02996         90 PGDISYDDLGVKDSNLREEMWK---EIDIVVNLAATTNFD-------ER-YDVALGINTLGALNVLNFAKKCV---K-VK  154 (491)
T ss_pred             ecccCCcCCCCChHHHHHHHHh---CCCEEEECccccCCc-------CC-HHHHHHHHHHHHHHHHHHHHhcC---C-CC
Confidence            99998       4444556655   589999999876421       12 45678899999999998875421   1 24


Q ss_pred             eEEEEcccccccc---------C-----------------------------------------------------CCCc
Q psy14567        136 SIVNVSSIAGKTA---------L-----------------------------------------------------EGHT  153 (238)
Q Consensus       136 ~iv~isS~~~~~~---------~-----------------------------------------------------~~~~  153 (238)
                      ++|++||....-.         .                                                     ....
T Consensus       155 ~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn  234 (491)
T PLN02996        155 MLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPN  234 (491)
T ss_pred             eEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCC
Confidence            7899888653211         0                                                     0123


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~  193 (238)
                      .|+.||+..+.+++..+     .++.+..+.|+.+..+..
T Consensus       235 ~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~  269 (491)
T PLN02996        235 TYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYK  269 (491)
T ss_pred             chHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCc
Confidence            59999999999996543     279999999999988764

>PLN02778 3,5-epimerase/4-reductase

Probab=99.29  E-value=9e-11  Score=96.81  Aligned_cols=131  Identities=15%  Similarity=0.060  Sum_probs=88.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ..+.++||||+|.||++++++|.++|++|+...                    .|+++.+.+...++.. ++|+|||+||
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------~~~~~~~~v~~~l~~~-~~D~ViH~Aa   66 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------GRLENRASLEADIDAV-KPTHVFNAAG   66 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------CccCCHHHHHHHHHhc-CCCEEEECCc
Confidence            334689999999999999999999999887431                    3455666666666654 5899999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccc--cc------------c----cCCCC
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIA--GK------------T----ALEGH  152 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~--~~------------~----~~~~~  152 (238)
                      ....... +...++ -...+++|+.++..+++++...    + - +.+++||..  +.            .    +.+..
T Consensus        67 ~~~~~~~-~~~~~~-p~~~~~~Nv~gt~~ll~aa~~~----g-v-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~  138 (298)
T PLN02778         67 VTGRPNV-DWCESH-KVETIRANVVGTLTLADVCRER----G-L-VLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTG  138 (298)
T ss_pred             ccCCCCc-hhhhhC-HHHHHHHHHHHHHHHHHHHHHh----C-C-CEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCC
Confidence            7643211 111122 3556789999999999998643    2 1 334444321  10            0    11123


Q ss_pred             chhhHHHHHHHHHHHHHH
Q psy14567        153 TIYSASKAALDSITRTMA  170 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~  170 (238)
                      ..|+.+|.+.+.+++.++
T Consensus       139 s~Yg~sK~~~E~~~~~y~  156 (298)
T PLN02778        139 SFYSKTKAMVEELLKNYE  156 (298)
T ss_pred             CchHHHHHHHHHHHHHhh
Confidence            589999999999998765

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.28  E-value=9e-12  Score=102.13  Aligned_cols=141  Identities=19%  Similarity=0.229  Sum_probs=96.7

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARF   94 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~   94 (238)
                      ++||||+|-||.++.++|.+.|+.|+.++|+                 .+|++|.+++.++++++ ++|+|||+|++...
T Consensus         3 iLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------~~dl~d~~~~~~~~~~~-~pd~Vin~aa~~~~   64 (286)
T PF04321_consen    3 ILITGASGFLGSALARALKERGYEVIATSRS-----------------DLDLTDPEAVAKLLEAF-KPDVVINCAAYTNV   64 (286)
T ss_dssp             EEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------CS-TTSHHHHHHHHHHH---SEEEE------H
T ss_pred             EEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------hcCCCCHHHHHHHHHHh-CCCeEeccceeecH
Confidence            6789999999999999999999999999887                 68999999999999887 59999999998643


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccc---c--------ccCCCCchhhHHHHHHH
Q psy14567         95 DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAG---K--------TALEGHTIYSASKAALD  163 (238)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~---~--------~~~~~~~~y~~sK~al~  163 (238)
                      ..    ...+ -+..+.+|+.++..+.+.+..    .  +.++|++||..-   .        ....+...|+.+|...+
T Consensus        65 ~~----ce~~-p~~a~~iN~~~~~~la~~~~~----~--~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E  133 (286)
T PF04321_consen   65 DA----CEKN-PEEAYAINVDATKNLAEACKE----R--GARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGE  133 (286)
T ss_dssp             HH----HHHS-HHHHHHHHTHHHHHHHHHHHH----C--T-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHH
T ss_pred             Hh----hhhC-hhhhHHHhhHHHHHHHHHHHH----c--CCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHH
Confidence            21    1111 355688999999998888753    2  469999999532   1        12234679999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecC
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQ  191 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~  191 (238)
                      ..++...    +   ....+.++++-.+
T Consensus       134 ~~v~~~~----~---~~~IlR~~~~~g~  154 (286)
T PF04321_consen  134 QAVRAAC----P---NALILRTSWVYGP  154 (286)
T ss_dssp             HHHHHH-----S---SEEEEEE-SEESS
T ss_pred             HHHHHhc----C---CEEEEecceeccc
Confidence            8887632    1   2344555555544

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.15  E-value=1.4e-10  Score=91.79  Aligned_cols=167  Identities=15%  Similarity=0.079  Sum_probs=121.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHH----HHh----hCCCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQ----AFPNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~----~~~----~~~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      .++++|||-||.-|.-+|+.|++.|+.|.-+.|..+..+.    +..    ..+++..+.+|++|..++.++++++ .||
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v-~Pd   80 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV-QPD   80 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc-Cch
Confidence            4688999999999999999999999999999887543221    111    1134788999999999999999988 589


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccc-----------ccccCCCC
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIA-----------GKTALEGH  152 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~-----------~~~~~~~~  152 (238)
                      -+.|.|+.....-..+.+.     ...+++-.|+..++.+..-+-.+   +-++..-||..           ...|+.+.
T Consensus        81 EIYNLaAQS~V~vSFe~P~-----~T~~~~~iGtlrlLEaiR~~~~~---~~rfYQAStSE~fG~v~~~pq~E~TPFyPr  152 (345)
T COG1089          81 EIYNLAAQSHVGVSFEQPE-----YTADVDAIGTLRLLEAIRILGEK---KTRFYQASTSELYGLVQEIPQKETTPFYPR  152 (345)
T ss_pred             hheeccccccccccccCcc-----eeeeechhHHHHHHHHHHHhCCc---ccEEEecccHHhhcCcccCccccCCCCCCC
Confidence            9999998665433333332     23577888999998887644321   34555555432           13355678


Q ss_pred             chhhHHHHHHHHHHHHHHHHh---CCCCeEEEEEeCCc
Q psy14567        153 TIYSASKAALDSITRTMALEL---GPYNIRVNSVQPTV  187 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~---~~~~i~v~~i~PG~  187 (238)
                      .+|+++|.....++...+..|   +..||-+|.=+|.=
T Consensus       153 SPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~R  190 (345)
T COG1089         153 SPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLR  190 (345)
T ss_pred             CHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCC
Confidence            899999999999998888776   35578888766653

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.15  E-value=4e-10  Score=92.33  Aligned_cols=177  Identities=11%  Similarity=-0.002  Sum_probs=108.7

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh---cCC-ccEEEEccC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK---VGP-VDVLINNAA   90 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~---~g~-id~li~~ag   90 (238)
                      ++||||||.+|++++++|.+.|++|.+++|+.++..     ..++..+.+|+.|++++.++++.   +.. +|.++++++
T Consensus         2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~   76 (285)
T TIGR03649         2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP   76 (285)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence            678999999999999999999999999999987542     23567788999999999988842   334 899998876


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHH
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMA  170 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~  170 (238)
                      ...       +  . .+.        .    +.++...++.+ -.++|++||.....+.       ..+...+.+.+.  
T Consensus        77 ~~~-------~--~-~~~--------~----~~~i~aa~~~g-v~~~V~~Ss~~~~~~~-------~~~~~~~~~l~~--  124 (285)
T TIGR03649        77 PIP-------D--L-APP--------M----IKFIDFARSKG-VRRFVLLSASIIEKGG-------PAMGQVHAHLDS--  124 (285)
T ss_pred             CCC-------C--h-hHH--------H----HHHHHHHHHcC-CCEEEEeeccccCCCC-------chHHHHHHHHHh--
Confidence            321       0  0 111        1    12233333444 4589999986543221       122222222211  


Q ss_pred             HHhCCCCeEEEEEeCCceecCcccCCCCCC-CccCCccc--CCCCCCcCCCCCcccccccccccc
Q psy14567        171 LELGPYNIRVNSVQPTVVMTQMGRTGWSDP-AKAGPMLA--KTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       171 ~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~-~~~~~~~~--~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                          ..|+....+.|+++..++........ ........  .....-+...+|+|+++..++.+.
T Consensus       125 ----~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~  185 (285)
T TIGR03649       125 ----LGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDK  185 (285)
T ss_pred             ----ccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCC
Confidence                13789999999988655422110000 00000110  111123678899999988887653

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>KOG1430|consensus

Probab=99.14  E-value=5.6e-10  Score=92.75  Aligned_cols=168  Identities=17%  Similarity=0.132  Sum_probs=120.5

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCC--CEEEEecCChHh--HH-H-HHhhCCCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQAN--LD-S-LKQAFPNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~--~~-~-~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      .+..+++||||+|.+|++++.+|.+++  .+|.+.+.....  .. + ....-+.+..+.+|+.+..++.+.++   +. 
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~---~~-   77 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ---GA-   77 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc---Cc-
Confidence            356788999999999999999999998  688888877642  11 1 11123468889999999888877776   35 


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc------------ccCCC
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK------------TALEG  151 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~~  151 (238)
                      .++|+|....+. +...   + -+..+++|+.++-.+++++...-     -.++|++||..-.            .+.+.
T Consensus        78 ~Vvh~aa~~~~~-~~~~---~-~~~~~~vNV~gT~nvi~~c~~~~-----v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~  147 (361)
T KOG1430|consen   78 VVVHCAASPVPD-FVEN---D-RDLAMRVNVNGTLNVIEACKELG-----VKRLIYTSSAYVVFGGEPIINGDESLPYPL  147 (361)
T ss_pred             eEEEeccccCcc-cccc---c-hhhheeecchhHHHHHHHHHHhC-----CCEEEEecCceEEeCCeecccCCCCCCCcc
Confidence            666666544322 2211   2 46668999999999888886543     3588998886532            22232


Q ss_pred             --CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCccc
Q psy14567        152 --HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR  194 (238)
Q Consensus       152 --~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~  194 (238)
                        ...|+.||+-.+.+++....   ..+....++.|-.|-.|-.+
T Consensus       148 ~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~  189 (361)
T KOG1430|consen  148 KHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDK  189 (361)
T ss_pred             ccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCc
Confidence              24999999999998876654   45688899999999887543

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.11  E-value=1.4e-09  Score=89.11  Aligned_cols=195  Identities=13%  Similarity=0.113  Sum_probs=108.9

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARF   94 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~   94 (238)
                      ++||||+|.||.++++.|++.|++|++++|+.+..+....    ..  ..|... +.   ..+.+..+|+|||+||....
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~-~~---~~~~~~~~D~Vvh~a~~~~~   70 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW----EG--YKPWAP-LA---ESEALEGADAVINLAGEPIA   70 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc----ee--eecccc-cc---hhhhcCCCCEEEECCCCCcc
Confidence            5789999999999999999999999999998866432211    11  122222 11   22334579999999996532


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-ceEEEEcccc--ccc---c------CCCCchhhHHHHHH
Q psy14567         95 DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ-GSIVNVSSIA--GKT---A------LEGHTIYSASKAAL  162 (238)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-g~iv~isS~~--~~~---~------~~~~~~y~~sK~al  162 (238)
                      .  .+...+. ....+++|+.++..+++++...    +.+ ..+++.|+..  +..   +      ..+...|+..+...
T Consensus        71 ~--~~~~~~~-~~~~~~~n~~~~~~l~~a~~~~----~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~  143 (292)
T TIGR01777        71 D--KRWTEER-KQEIRDSRIDTTRALVEAIAAA----EQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDW  143 (292)
T ss_pred             c--ccCCHHH-HHHHHhcccHHHHHHHHHHHhc----CCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHH
Confidence            1  1122233 4566789999988888887532    211 2344444432  110   0      00111233333333


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-----CCc-cCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-----PAK-AGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-----~~~-~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +...+    .+...++.+..+.|+.+..+-.. ....     ... ...........-+...+|+++++..++.+
T Consensus       144 e~~~~----~~~~~~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~  213 (292)
T TIGR01777       144 EEAAQ----AAEDLGTRVVLLRTGIVLGPKGG-ALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALEN  213 (292)
T ss_pred             HHHhh----hchhcCCceEEEeeeeEECCCcc-hhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcC
Confidence            33332    22334789999999999776321 0000     000 00111112223456788888888887765

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.09  E-value=2.6e-09  Score=97.54  Aligned_cols=141  Identities=15%  Similarity=0.043  Sum_probs=97.3

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      ..++||||+|.||++++++|.+.|++|..                    ...|++|.+.+.+.++.. ++|+|||+|+..
T Consensus       381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~--------------------~~~~l~d~~~v~~~i~~~-~pd~Vih~Aa~~  439 (668)
T PLN02260        381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEY--------------------GKGRLEDRSSLLADIRNV-KPTHVFNAAGVT  439 (668)
T ss_pred             ceEEEECCCchHHHHHHHHHHhCCCeEEe--------------------eccccccHHHHHHHHHhh-CCCEEEECCccc
Confidence            35899999999999999999999988731                    124678888888888766 589999999976


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-----------cc-------CCCCch
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-----------TA-------LEGHTI  154 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~-------~~~~~~  154 (238)
                      ..... +...++ -...+++|+.++..+++++...    +  .+.+++||....           .+       .+....
T Consensus       440 ~~~~~-~~~~~~-~~~~~~~N~~gt~~l~~a~~~~----g--~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~  511 (668)
T PLN02260        440 GRPNV-DWCESH-KVETIRANVVGTLTLADVCREN----G--LLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSF  511 (668)
T ss_pred             CCCCC-ChHHhC-HHHHHHHHhHHHHHHHHHHHHc----C--CeEEEEcccceecCCcccccccCCCCCcCCCCCCCCCh
Confidence            42111 111222 4566789999999999998642    2  245555442210           01       112368


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeC
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQP  185 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~P  185 (238)
                      |+.+|.+.+.+++.+..   ..++|+..+..
T Consensus       512 Yg~sK~~~E~~~~~~~~---~~~~r~~~~~~  539 (668)
T PLN02260        512 YSKTKAMVEELLREYDN---VCTLRVRMPIS  539 (668)
T ss_pred             hhHHHHHHHHHHHhhhh---heEEEEEEecc
Confidence            99999999999987632   23567766653

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.06  E-value=5.9e-10  Score=88.10  Aligned_cols=97  Identities=16%  Similarity=0.171  Sum_probs=70.6

Q ss_pred             CCCCCC-CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHH----hcCCccEEEEc
Q psy14567         14 TKGGDY-PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS----KVGPVDVLINN   88 (238)
Q Consensus        14 v~~itG-~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~----~~g~id~li~~   88 (238)
                      |-.||. +|||||+++|++|++.|++|+++++... +   . ..   ....+|+++.+++.++++    .++++|++|||
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l---~-~~---~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnn   87 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L---K-PE---PHPNLSIREIETTKDLLITLKELVQEHDILIHS   87 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c---c-cc---cCCcceeecHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            334554 4788999999999999999999876321 1   1 10   124589999888877664    45889999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQ  122 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  122 (238)
                      ||+..+.+..+.+.++ |++++   ..+.+.+.+
T Consensus        88 Agv~d~~~~~~~s~e~-~~~~~---~~~~~~~~~  117 (227)
T TIGR02114        88 MAVSDYTPVYMTDLEQ-VQASD---NLNEFLSKQ  117 (227)
T ss_pred             CEeccccchhhCCHHH-Hhhhc---chhhhhccc
Confidence            9988777788888887 88764   345555554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.05  E-value=9.1e-09  Score=101.13  Aligned_cols=162  Identities=20%  Similarity=0.179  Sum_probs=113.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCC----CEEEEecCChHhH---HHHHhh-----------CCCceEEEeecCCH---
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHE----AIIIALSKTQANL---DSLKQA-----------FPNVQTVQVDLQDW---   69 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G----~~V~~~~r~~~~~---~~~~~~-----------~~~~~~~~~D~~~~---   69 (238)
                      +.++++||||+|.||.+++++|++.+    .+|+...|+.+..   +.+.+.           ...+.++.+|++++   
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            34678999999999999999999887    6888888874332   222211           12578889999754   


Q ss_pred             ---HHHHHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc
Q psy14567         70 ---ARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK  146 (238)
Q Consensus        70 ---~~v~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  146 (238)
                         +...++.   ..+|++||+|+....    ..+    +......|+.++..+++.+..    .+ ..+++++||....
T Consensus      1050 l~~~~~~~l~---~~~d~iiH~Aa~~~~----~~~----~~~~~~~nv~gt~~ll~~a~~----~~-~~~~v~vSS~~v~ 1113 (1389)
T TIGR03443      1050 LSDEKWSDLT---NEVDVIIHNGALVHW----VYP----YSKLRDANVIGTINVLNLCAE----GK-AKQFSFVSSTSAL 1113 (1389)
T ss_pred             cCHHHHHHHH---hcCCEEEECCcEecC----ccC----HHHHHHhHHHHHHHHHHHHHh----CC-CceEEEEeCeeec
Confidence               3333333   358999999986532    111    344456799999999888743    22 3489999996432


Q ss_pred             cc----------------------------CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        147 TA----------------------------LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       147 ~~----------------------------~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      ..                            ......|+.||.+.+.+++..+.    .|+.+..+.||.+..+.
T Consensus      1114 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~ 1183 (1389)
T TIGR03443      1114 DTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDS 1183 (1389)
T ss_pred             CcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCC
Confidence            10                            00124699999999999876543    38999999999997764

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.04  E-value=9e-09  Score=91.76  Aligned_cols=119  Identities=22%  Similarity=0.263  Sum_probs=82.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC---EEEEecCChHh---HHHHH-------------hh---------CCCceEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA---IIIALSKTQAN---LDSLK-------------QA---------FPNVQTV   62 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~---------~~~~~~~   62 (238)
                      +.++++||||||.||.++++.|++.+.   +|+++.|..+.   .+.+.             +.         ...+..+
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            467889999999999999999997652   78888885421   11121             11         1247788


Q ss_pred             EeecCCH------HHHHHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCce
Q psy14567         63 QVDLQDW------ARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS  136 (238)
Q Consensus        63 ~~D~~~~------~~v~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~  136 (238)
                      ..|++++      +..+.+.+   .+|+|||+|+.....       ++ .+..+++|+.++..+++.+...-   . -.+
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~---~vDiVIH~AA~v~f~-------~~-~~~a~~vNV~GT~nLLelA~~~~---~-lk~  262 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAK---EVDVIINSAANTTFD-------ER-YDVAIDINTRGPCHLMSFAKKCK---K-LKL  262 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHh---cCCEEEECccccccc-------cC-HHHHHHHHHHHHHHHHHHHHHcC---C-CCe
Confidence            9999986      33444444   489999999876421       12 56678899999999998875431   1 246


Q ss_pred             EEEEcccc
Q psy14567        137 IVNVSSIA  144 (238)
Q Consensus       137 iv~isS~~  144 (238)
                      +|++||..
T Consensus       263 fV~vSTay  270 (605)
T PLN02503        263 FLQVSTAY  270 (605)
T ss_pred             EEEccCce
Confidence            88888743

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.01  E-value=3.3e-09  Score=83.94  Aligned_cols=201  Identities=14%  Similarity=0.114  Sum_probs=116.2

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARF   94 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~   94 (238)
                      ++||||||-||++++..|.+.|.+|++++|+....+.....  +       +...+.+.+..+.  ++|+|||.||..-.
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~--~-------v~~~~~~~~~~~~--~~DavINLAG~~I~   69 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP--N-------VTLWEGLADALTL--GIDAVINLAGEPIA   69 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc--c-------ccccchhhhcccC--CCCEEEECCCCccc
Confidence            57999999999999999999999999999998775433211  1       1122333333332  69999999996543


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh----HHHHHHHHHHHHHH
Q psy14567         95 DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS----ASKAALDSITRTMA  170 (238)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~----~sK~al~~l~~~l~  170 (238)
                      ++.+....+   +.+    +.+-+..++.+.....+...+.++..=+|..|..+......|.    ...-.+..+|+.+.
T Consensus        70 ~rrWt~~~K---~~i----~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE  142 (297)
T COG1090          70 ERRWTEKQK---EEI----RQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWE  142 (297)
T ss_pred             cccCCHHHH---HHH----HHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHH
Confidence            332222111   222    3356666677777666544345555555555544433333222    12234556666554


Q ss_pred             HHh---CCCCeEEEEEeCCceecCccc---CCCCCCC--ccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        171 LEL---GPYNIRVNSVQPTVVMTQMGR---TGWSDPA--KAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       171 ~~~---~~~~i~v~~i~PG~v~t~~~~---~~~~~~~--~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      .+.   ...|+||..+.-|+|-.+..-   +....-.  .-.++......=-....+|..+++.|++.+..
T Consensus       143 ~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~  213 (297)
T COG1090         143 EEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ  213 (297)
T ss_pred             HHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcC
Confidence            433   445899999999999775321   1100000  00111111111124567888899999888743

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.96  E-value=2.6e-08  Score=82.34  Aligned_cols=160  Identities=19%  Similarity=0.178  Sum_probs=112.3

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCC-CEEEEecCChH---hHHHHHhhC-----------CCceEEEeecCCH------HHH
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQA---NLDSLKQAF-----------PNVQTVQVDLQDW------ART   72 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~---~~~~~~~~~-----------~~~~~~~~D~~~~------~~v   72 (238)
                      .++.|||||.+|..+..+|...- ++|+...|-++   ..+.+.+.+           .++..+..|++.+      ..-
T Consensus         2 ~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~   81 (382)
T COG3320           2 NVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTW   81 (382)
T ss_pred             eEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHH
Confidence            46789999999999999998654 59998888654   233333322           2588888899743      223


Q ss_pred             HHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc----
Q psy14567         73 RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA----  148 (238)
Q Consensus        73 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----  148 (238)
                      +++.+   .+|.+|||+.....-     -+   ..+.-..|+.|+..+++.+.     +++...+.+|||++....    
T Consensus        82 ~~La~---~vD~I~H~gA~Vn~v-----~p---Ys~L~~~NVlGT~evlrLa~-----~gk~Kp~~yVSsisv~~~~~~~  145 (382)
T COG3320          82 QELAE---NVDLIIHNAALVNHV-----FP---YSELRGANVLGTAEVLRLAA-----TGKPKPLHYVSSISVGETEYYS  145 (382)
T ss_pred             HHHhh---hcceEEecchhhccc-----Cc---HHHhcCcchHhHHHHHHHHh-----cCCCceeEEEeeeeeccccccC
Confidence            33444   589999999866421     11   35556789999988888763     221334899999775221    


Q ss_pred             ----------------CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc
Q psy14567        149 ----------------LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       149 ----------------~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~  193 (238)
                                      ......|+-||-+.+.+++.....    |+++..+.||++-.+..
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r----GLpv~I~Rpg~I~gds~  202 (382)
T COG3320         146 NFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR----GLPVTIFRPGYITGDSR  202 (382)
T ss_pred             CCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc----CCCeEEEecCeeeccCc
Confidence                            112479999999999998776544    89999999999976554

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.90  E-value=6e-09  Score=79.20  Aligned_cols=76  Identities=13%  Similarity=0.181  Sum_probs=62.2

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHhc----CCccEEE
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSKV----GPVDVLI   86 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~----g~id~li   86 (238)
                      +++||||| |+|.++++.|++.|++|++++|+.++.+++....   ..+.++++|++|++++.++++..    |++|++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv   80 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV   80 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence            46789998 7888899999999999999999988877765433   35778899999999998887654    7888888


Q ss_pred             EccC
Q psy14567         87 NNAA   90 (238)
Q Consensus        87 ~~ag   90 (238)
                      +.+-
T Consensus        81 ~~vh   84 (177)
T PRK08309         81 AWIH   84 (177)
T ss_pred             Eecc
Confidence            6664

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.90  E-value=5.1e-09  Score=91.33  Aligned_cols=124  Identities=15%  Similarity=0.096  Sum_probs=85.7

Q ss_pred             CCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCCCC
Q psy14567         17 GDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDR   96 (238)
Q Consensus        17 itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~~~   96 (238)
                      ++||+||+|.++++.|...|+.|+.+.+...+.               +.          ..-.+++.++..+-..    
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~---------------~~----------~~~~~~~~~~~d~~~~----   93 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTW---------------AA----------GWGDRFGALVFDATGI----   93 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCcccccc---------------cc----------CcCCcccEEEEECCCC----
Confidence            678899999999999999999999876654411               00          0001344333322111    


Q ss_pred             CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHHhCCC
Q psy14567         97 FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPY  176 (238)
Q Consensus        97 ~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~~~~  176 (238)
                         .+.++ +        .+.+...+..++.|..   .|+||+++|..+..   ....|+++|+++.+++++++.|+ +.
T Consensus        94 ---~~~~~-l--------~~~~~~~~~~l~~l~~---~griv~i~s~~~~~---~~~~~~~akaal~gl~rsla~E~-~~  154 (450)
T PRK08261         94 ---TDPAD-L--------KALYEFFHPVLRSLAP---CGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRSLGKEL-RR  154 (450)
T ss_pred             ---CCHHH-H--------HHHHHHHHHHHHhccC---CCEEEEEccccccC---CchHHHHHHHHHHHHHHHHHHHh-hc
Confidence               01122 2        2334556667777643   57999999987653   34579999999999999999999 77


Q ss_pred             CeEEEEEeCCce
Q psy14567        177 NIRVNSVQPTVV  188 (238)
Q Consensus       177 ~i~v~~i~PG~v  188 (238)
                      ++++|.|.|+..
T Consensus       155 gi~v~~i~~~~~  166 (450)
T PRK08261        155 GATAQLVYVAPG  166 (450)
T ss_pred             CCEEEEEecCCC
Confidence            999999999873

>KOG0747|consensus

Probab=98.89  E-value=5.2e-09  Score=82.93  Aligned_cols=168  Identities=20%  Similarity=0.147  Sum_probs=120.4

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhC--CCEEEEec-----CChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQH--EAIIIALS-----KTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~--G~~V~~~~-----r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      +.++||||.|.||.+.+..++..  .++.+.++     .+...++++ ...++.+++..|+.+...+.-++.+- ++|.|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~~~-~id~v   84 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPV-RNSPNYKFVEGDIADADLVLYLFETE-EIDTV   84 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhh-ccCCCceEeeccccchHHHHhhhccC-chhhh
Confidence            66789999999999999999875  34444432     232223232 23468999999999988877776543 79999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccc------------cccCCCCc
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAG------------KTALEGHT  153 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~------------~~~~~~~~  153 (238)
                      ||.|...........+    + ...+.|+.++..+++.......    --++|++|+-.-            ...+.+..
T Consensus        85 ihfaa~t~vd~s~~~~----~-~~~~nnil~t~~Lle~~~~sg~----i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtn  155 (331)
T KOG0747|consen   85 IHFAAQTHVDRSFGDS----F-EFTKNNILSTHVLLEAVRVSGN----IRRFVHVSTDEVYGDSDEDAVVGEASLLNPTN  155 (331)
T ss_pred             hhhHhhhhhhhhcCch----H-HHhcCCchhhhhHHHHHHhccC----eeEEEEecccceecCccccccccccccCCCCC
Confidence            9999876543322222    2 2257899999999888865542    347999988431            11234678


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCccc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR  194 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~  194 (238)
                      .|+++|+|.+++.+++...|   |+.+..+.-+.|..|-+.
T Consensus       156 pyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~  193 (331)
T KOG0747|consen  156 PYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQY  193 (331)
T ss_pred             chHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcC
Confidence            99999999999999998887   677777777777777543

>PLN00016 RNA-binding protein; Provisional

Probab=98.84  E-value=4.5e-08  Score=83.50  Aligned_cols=182  Identities=11%  Similarity=0.050  Sum_probs=109.1

Q ss_pred             CcCCCCCC----CCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHH--------hh-CCCceEEEeecCCHHHHHHHHH
Q psy14567         11 RTNTKGGD----YPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLK--------QA-FPNVQTVQVDLQDWARTRAAVS   77 (238)
Q Consensus        11 ~~~v~~it----G~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--------~~-~~~~~~~~~D~~~~~~v~~~~~   77 (238)
                      ..+.++||    ||+|.||.+++++|++.|++|++++|+.+..+.+.        .. ..+++++.+|+.|   +.+++.
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~  127 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVA  127 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhc
Confidence            44568999    99999999999999999999999999876432221        10 1247888899876   444442


Q ss_pred             hcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCC--C----
Q psy14567         78 KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALE--G----  151 (238)
Q Consensus        78 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--~----  151 (238)
                       ...+|+|||+++..         .    .        ++..+++++    .+.+ -.++|++||........  +    
T Consensus       128 -~~~~d~Vi~~~~~~---------~----~--------~~~~ll~aa----~~~g-vkr~V~~SS~~vyg~~~~~p~~E~  180 (378)
T PLN00016        128 -GAGFDVVYDNNGKD---------L----D--------EVEPVADWA----KSPG-LKQFLFCSSAGVYKKSDEPPHVEG  180 (378)
T ss_pred             -cCCccEEEeCCCCC---------H----H--------HHHHHHHHH----HHcC-CCEEEEEccHhhcCCCCCCCCCCC
Confidence             23589999987521         1    1        122233333    3333 35899999975422111  0    


Q ss_pred             --CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcc---------cCCCCCCcCCCCC
Q psy14567        152 --HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPML---------AKTPLGRFAGKLK  220 (238)
Q Consensus       152 --~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~---------~~~~~~r~~~~~~  220 (238)
                        ...+. +|...+.+.+       ..++.+..+.|+.+..+...... ...+.....         ......-+...+|
T Consensus       181 ~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~~-~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~D  251 (378)
T PLN00016        181 DAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKDC-EEWFFDRLVRGRPVPIPGSGIQLTQLGHVKD  251 (378)
T ss_pred             CcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCch-HHHHHHHHHcCCceeecCCCCeeeceecHHH
Confidence              11122 7877776553       23788999999999877532110 000000000         1111122556788


Q ss_pred             ccccccccccc
Q psy14567        221 PKPWNRWLLPS  231 (238)
Q Consensus       221 ia~~~~~l~s~  231 (238)
                      +|+++..++.+
T Consensus       252 va~ai~~~l~~  262 (378)
T PLN00016        252 LASMFALVVGN  262 (378)
T ss_pred             HHHHHHHHhcC
Confidence            88888877765

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.83  E-value=9.8e-08  Score=75.85  Aligned_cols=183  Identities=15%  Similarity=0.057  Sum_probs=110.6

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh--HHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      |+|+||+|.+|+++++.|.+.+++|.++.|+.+.  .+++.+.  +++++.+|+.|++++.++++   +.|.+|++.+..
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~--g~~vv~~d~~~~~~l~~al~---g~d~v~~~~~~~   75 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQAL--GAEVVEADYDDPESLVAALK---GVDAVFSVTPPS   75 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT--TTEEEES-TT-HHHHHHHHT---TCSEEEEESSCS
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcc--cceEeecccCCHHHHHHHHc---CCceEEeecCcc
Confidence            4689999999999999999999999999998743  4455543  56788999999999988888   689999988865


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCC----CCchhhHHHHHHHHHHHH
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALE----GHTIYSASKAALDSITRT  168 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----~~~~y~~sK~al~~l~~~  168 (238)
                      .     +. .   .+        ....+++++...    + =.++| .||........    +...+-..|..++...+.
T Consensus        76 ~-----~~-~---~~--------~~~~li~Aa~~a----g-Vk~~v-~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~  132 (233)
T PF05368_consen   76 H-----PS-E---LE--------QQKNLIDAAKAA----G-VKHFV-PSSFGADYDESSGSEPEIPHFDQKAEIEEYLRE  132 (233)
T ss_dssp             C-----CC-H---HH--------HHHHHHHHHHHH----T--SEEE-ESEESSGTTTTTTSTTHHHHHHHHHHHHHHHHH
T ss_pred             h-----hh-h---hh--------hhhhHHHhhhcc----c-cceEE-EEEecccccccccccccchhhhhhhhhhhhhhh
Confidence            3     11 1   11        223344555432    2 23666 45554433211    122344566666655544


Q ss_pred             HHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccC---CcccCCCC---CCc-CCCCCcccccccccccc
Q psy14567        169 MALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAG---PMLAKTPL---GRF-AGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       169 l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~---~r~-~~~~~ia~~~~~l~s~~  232 (238)
                      .       ++..+.|.||++................   ...-..+.   ..+ .+.+|+++.+.-++.++
T Consensus       133 ~-------~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p  196 (233)
T PF05368_consen  133 S-------GIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDP  196 (233)
T ss_dssp             C-------TSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSG
T ss_pred             c-------cccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcCh
Confidence            3       7899999999987655432111000100   00001111   123 37788888888877763

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG1429|consensus

Probab=98.82  E-value=3.8e-08  Score=78.18  Aligned_cols=163  Identities=15%  Similarity=0.139  Sum_probs=110.3

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHH-HHHh--hCCCceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLD-SLKQ--AFPNVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      .+...+.++||||.|.||+|++..|..+|..|++++--....+ ++..  ..++.+.+.-|+..+     ++..   +|.
T Consensus        23 ~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~e---vD~   94 (350)
T KOG1429|consen   23 KPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKE---VDQ   94 (350)
T ss_pred             cCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHH---hhh
Confidence            3455678999999999999999999999999998875443322 2221  224677777777654     4443   688


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccc----------------ccc
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAG----------------KTA  148 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~----------------~~~  148 (238)
                      ++|.|....+..+...+     ...+.+|+.++.+.+..+...      ..|++..|+..-                ..+
T Consensus        95 IyhLAapasp~~y~~np-----vktIktN~igtln~lglakrv------~aR~l~aSTseVYgdp~~hpq~e~ywg~vnp  163 (350)
T KOG1429|consen   95 IYHLAAPASPPHYKYNP-----VKTIKTNVIGTLNMLGLAKRV------GARFLLASTSEVYGDPLVHPQVETYWGNVNP  163 (350)
T ss_pred             hhhhccCCCCcccccCc-----cceeeecchhhHHHHHHHHHh------CceEEEeecccccCCcccCCCccccccccCc
Confidence            88989776554333222     223678999998888877432      346776665332                112


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        149 LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       149 ~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      ......|...|...+.|+....++   .||-+....+..+..|.
T Consensus       164 igpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPr  204 (350)
T KOG1429|consen  164 IGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPR  204 (350)
T ss_pred             CCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCc
Confidence            334678999999999999887665   46766666666665554

>PRK12320 hypothetical protein; Provisional

Probab=98.77  E-value=5.6e-08  Score=87.85  Aligned_cols=133  Identities=14%  Similarity=0.154  Sum_probs=91.6

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARF   94 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~   94 (238)
                      ++||||+|.||++++++|.+.|++|+.++|+....     ..++++++.+|++++. +.++++   ++|++||+|+....
T Consensus         3 ILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-----~~~~ve~v~~Dl~d~~-l~~al~---~~D~VIHLAa~~~~   73 (699)
T PRK12320          3 ILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-----LDPRVDYVCASLRNPV-LQELAG---EADAVIHLAPVDTS   73 (699)
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-----ccCCceEEEccCCCHH-HHHHhc---CCCEEEEcCccCcc
Confidence            78999999999999999999999999999875431     1246889999999874 554444   58999999986321


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHHhC
Q psy14567         95 DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELG  174 (238)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~~  174 (238)
                              ..     .++|+.++.++++++.    +.+  .++|++||..+.   +  ..|.    ..+.+++    .  
T Consensus        74 --------~~-----~~vNv~Gt~nLleAA~----~~G--vRiV~~SS~~G~---~--~~~~----~aE~ll~----~--  119 (699)
T PRK12320         74 --------AP-----GGVGITGLAHVANAAA----RAG--ARLLFVSQAAGR---P--ELYR----QAETLVS----T--  119 (699)
T ss_pred             --------ch-----hhHHHHHHHHHHHHHH----HcC--CeEEEEECCCCC---C--cccc----HHHHHHH----h--
Confidence                    11     1478889988888874    233  479999876432   1  1232    1233221    1  


Q ss_pred             CCCeEEEEEeCCceecC
Q psy14567        175 PYNIRVNSVQPTVVMTQ  191 (238)
Q Consensus       175 ~~~i~v~~i~PG~v~t~  191 (238)
                       .++.+..+.|+.+..+
T Consensus       120 -~~~p~~ILR~~nVYGp  135 (699)
T PRK12320        120 -GWAPSLVIRIAPPVGR  135 (699)
T ss_pred             -cCCCEEEEeCceecCC
Confidence             2356677777777665

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.72  E-value=6.1e-08  Score=76.79  Aligned_cols=99  Identities=18%  Similarity=0.239  Sum_probs=65.8

Q ss_pred             CCCCCCCCCCc-hHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHH-HHHHHhcCCccEEEEccC
Q psy14567         13 NTKGGDYPKPG-IGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWART-RAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        13 ~v~~itG~s~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v-~~~~~~~g~id~li~~ag   90 (238)
                      .|-.||..|+| ||.++|++|+++|++|++++|+.... .  ....++.++.++.  .++. +.+.+.++.+|++|||||
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-~--~~~~~v~~i~v~s--~~~m~~~l~~~~~~~DivIh~AA   90 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-P--EPHPNLSIIEIEN--VDDLLETLEPLVKDHDVLIHSMA   90 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc-C--CCCCCeEEEEEec--HHHHHHHHHHHhcCCCEEEeCCc
Confidence            35567776665 99999999999999999998764321 0  0123456665433  3332 233344567899999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHH
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAV  117 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~  117 (238)
                      +..+.+....+.++ +..++++|....
T Consensus        91 vsd~~~~~~~~~~~-~~~~~~v~~~~~  116 (229)
T PRK06732         91 VSDYTPVYMTDLEE-VSASDNLNEFLT  116 (229)
T ss_pred             cCCceehhhhhhhh-hhhhhhhhhhhc
Confidence            88766655566666 777777755443

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.69  E-value=6.4e-08  Score=82.47  Aligned_cols=80  Identities=18%  Similarity=0.138  Sum_probs=62.7

Q ss_pred             CCcCCCCCCCC----------------CCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHH
Q psy14567         10 DRTNTKGGDYP----------------KPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTR   73 (238)
Q Consensus        10 ~~~~v~~itG~----------------s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   73 (238)
                      .+.++++||||                ||++|.++|++|+++|++|++++++.+ .+     .+ .....+|+++.+++.
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-----~~-~~~~~~dv~~~~~~~  258 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-----TP-AGVKRIDVESAQEML  258 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-----CC-CCcEEEccCCHHHHH
Confidence            46678899999                555999999999999999999998763 21     11 123578999999988


Q ss_pred             HHHH-hcCCccEEEEccCCCCCCC
Q psy14567         74 AAVS-KVGPVDVLINNAAVARFDR   96 (238)
Q Consensus        74 ~~~~-~~g~id~li~~ag~~~~~~   96 (238)
                      +.++ .++++|++|+|||+..+.+
T Consensus       259 ~~v~~~~~~~DilI~~Aav~d~~~  282 (399)
T PRK05579        259 DAVLAALPQADIFIMAAAVADYRP  282 (399)
T ss_pred             HHHHHhcCCCCEEEEccccccccc
Confidence            8775 4688999999999875543

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.53  E-value=2.6e-06  Score=69.08  Aligned_cols=132  Identities=17%  Similarity=0.114  Sum_probs=93.9

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      .+++|||||.+|.+++++|.+.|++|.+..|+.+......   ..+.+...|+.+++++...++   ..|.+++..+...
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---~~v~~~~~d~~~~~~l~~a~~---G~~~~~~i~~~~~   75 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---GGVEVVLGDLRDPKSLVAGAK---GVDGVLLISGLLD   75 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---CCcEEEEeccCCHhHHHHHhc---cccEEEEEecccc
Confidence            4678999999999999999999999999999999987777   689999999999999888777   5788888887653


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHH
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMA  170 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~  170 (238)
                       .....          ............+...     .+ ...++.+|...+..  .....|..+|...+...+...
T Consensus        76 -~~~~~----------~~~~~~~~~~~a~~a~-----~~-~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~l~~sg  133 (275)
T COG0702          76 -GSDAF----------RAVQVTAVVRAAEAAG-----AG-VKHGVSLSVLGADA--ASPSALARAKAAVEAALRSSG  133 (275)
T ss_pred             -cccch----------hHHHHHHHHHHHHHhc-----CC-ceEEEEeccCCCCC--CCccHHHHHHHHHHHHHHhcC
Confidence             21100          1112223333333332     11 24577777666543  234688999998888776653

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.52  E-value=2.6e-07  Score=78.47  Aligned_cols=81  Identities=19%  Similarity=0.181  Sum_probs=62.4

Q ss_pred             CCcCCCCCCCC---------------CCc-hHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHH-
Q psy14567         10 DRTNTKGGDYP---------------KPG-IGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWART-   72 (238)
Q Consensus        10 ~~~~v~~itG~---------------s~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v-   72 (238)
                      .+.+.++||||               ||| +|.++|++|..+|++|+++.++.+..      .+. ....+|+++.+++ 
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~~~-~~~~~~v~~~~~~~  255 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------TPP-GVKSIKVSTAEEML  255 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------CCC-CcEEEEeccHHHHH
Confidence            45677888998               667 99999999999999999988765421      121 2357899999998 


Q ss_pred             HHHHHh-cCCccEEEEccCCCCCCCC
Q psy14567         73 RAAVSK-VGPVDVLINNAAVARFDRF   97 (238)
Q Consensus        73 ~~~~~~-~g~id~li~~ag~~~~~~~   97 (238)
                      ++++++ ++++|++|+|||+..+.+.
T Consensus       256 ~~~~~~~~~~~D~~i~~Aavsd~~~~  281 (390)
T TIGR00521       256 EAALNELAKDFDIFISAAAVADFKPK  281 (390)
T ss_pred             HHHHHhhcccCCEEEEcccccccccc
Confidence            666644 4779999999999866544

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.49  E-value=3.6e-07  Score=75.02  Aligned_cols=78  Identities=17%  Similarity=0.193  Sum_probs=60.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCE-EEEecCCh---HhHHHHHhhC----CCceEEEeecCCHHHHHHHHHhcCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAI-IIALSKTQ---ANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSKVGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~-V~~~~r~~---~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~g~i   82 (238)
                      +.++++|+|| ||+|++++..|++.|++ |.+++|+.   ++.+++.+++    +...+..+|+++.+++.+.++   ..
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---~~  200 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---SS  200 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---cC
Confidence            4567889999 69999999999999995 99999996   5666655443    334566789888777766665   46


Q ss_pred             cEEEEccCCC
Q psy14567         83 DVLINNAAVA   92 (238)
Q Consensus        83 d~li~~ag~~   92 (238)
                      |++|||....
T Consensus       201 DilINaTp~G  210 (289)
T PRK12548        201 DILVNATLVG  210 (289)
T ss_pred             CEEEEeCCCC
Confidence            9999999654

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.49  E-value=7.2e-07  Score=68.95  Aligned_cols=80  Identities=15%  Similarity=0.100  Sum_probs=64.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC---CceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP---NVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      +.+.++|.||+|++|+++++.|++.|++|++++|+.++++++.+...   ......+|..+.+++.+.++   ..|++|+
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~diVi~  103 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK---GADVVFA  103 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh---cCCEEEE
Confidence            45678889999999999999999999999999999988877765442   35566788989888877776   4698888


Q ss_pred             ccCCCC
Q psy14567         88 NAAVAR   93 (238)
Q Consensus        88 ~ag~~~   93 (238)
                      +.....
T Consensus       104 at~~g~  109 (194)
T cd01078         104 AGAAGV  109 (194)
T ss_pred             CCCCCc
Confidence            776443

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1372|consensus

Probab=98.41  E-value=2.6e-07  Score=72.12  Aligned_cols=217  Identities=13%  Similarity=0.024  Sum_probs=132.7

Q ss_pred             eCCCCc-CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-----HHHHHhh-----CCCceEEEeecCCHHHHHHH
Q psy14567          7 LHPDRT-NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-----LDSLKQA-----FPNVQTVQVDLQDWARTRAA   75 (238)
Q Consensus         7 l~~~~~-~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~-----~~~~~~~~~D~~~~~~v~~~   75 (238)
                      +...+. +|++|||-+|.=|.-++..|+..|+.|..+.|+.++     ++.+...     .........|++|...+.++
T Consensus        22 ~~~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~  101 (376)
T KOG1372|consen   22 LGAFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKL  101 (376)
T ss_pred             ccCcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHH
Confidence            333344 488999999999999999999999999988776554     3333211     13477889999999999999


Q ss_pred             HHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccc--cc--------
Q psy14567         76 VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSI--AG--------  145 (238)
Q Consensus        76 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~--~~--------  145 (238)
                      +..+ +++-+.|.|......-..+.+...     -++.-.|++.++.+...+-...+  -++---|+.  -|        
T Consensus       102 I~~i-kPtEiYnLaAQSHVkvSFdlpeYT-----AeVdavGtLRlLdAi~~c~l~~~--VrfYQAstSElyGkv~e~PQs  173 (376)
T KOG1372|consen  102 ISTI-KPTEVYNLAAQSHVKVSFDLPEYT-----AEVDAVGTLRLLDAIRACRLTEK--VRFYQASTSELYGKVQEIPQS  173 (376)
T ss_pred             Hhcc-CchhhhhhhhhcceEEEeecccce-----eeccchhhhhHHHHHHhcCcccc--eeEEecccHhhcccccCCCcc
Confidence            9888 567777778766543333333221     24666788888887765544322  122222211  11        


Q ss_pred             -cccCCCCchhhHHHHHHHHHHHHHHH---HhCCCCeEEEEEeCCceecCcccCC-------CCCCCccCCcccCCCCCC
Q psy14567        146 -KTALEGHTIYSASKAALDSITRTMAL---ELGPYNIRVNSVQPTVVMTQMGRTG-------WSDPAKAGPMLAKTPLGR  214 (238)
Q Consensus       146 -~~~~~~~~~y~~sK~al~~l~~~l~~---~~~~~~i~v~~i~PG~v~t~~~~~~-------~~~~~~~~~~~~~~~~~r  214 (238)
                       ..|+-+..+|+++|.+..-.+-.++.   .++..||-+|.=+|--=++=.+++.       .......-.+.....++-
T Consensus       174 E~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RD  253 (376)
T KOG1372|consen  174 ETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRD  253 (376)
T ss_pred             cCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcc
Confidence             23444678999999875544433333   3456788888777643222122211       111111112333445566


Q ss_pred             cCCCCCccccccccccc
Q psy14567        215 FAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       215 ~~~~~~ia~~~~~l~s~  231 (238)
                      ++...|..++++.++.+
T Consensus       254 WGhA~dYVEAMW~mLQ~  270 (376)
T KOG1372|consen  254 WGHAGDYVEAMWLMLQQ  270 (376)
T ss_pred             cchhHHHHHHHHHHHhc
Confidence            77788888887777765

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.39  E-value=2.1e-05  Score=68.89  Aligned_cols=178  Identities=15%  Similarity=0.130  Sum_probs=110.7

Q ss_pred             CcCCCCCCCCCC-chHHHHHHHHhhCCCEEEEecCChHh-----HHHHHhhCC----CceEEEeecCCHHHHHHHHHhcC
Q psy14567         11 RTNTKGGDYPKP-GIGRCIVEKLSQHEAIIIALSKTQAN-----LDSLKQAFP----NVQTVQVDLQDWARTRAAVSKVG   80 (238)
Q Consensus        11 ~~~v~~itG~s~-gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~g   80 (238)
                      .+.++++|||+. -||.+++..|++-|++|+++..+-++     .+.+.+...    .+.+++.+..+..+++++++-+|
T Consensus       395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg  474 (866)
T COG4982         395 GDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIG  474 (866)
T ss_pred             ccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhc
Confidence            456889999875 49999999999999999998765433     223333332    26677889998888888886441


Q ss_pred             ------------------CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc--eEEEE
Q psy14567         81 ------------------PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG--SIVNV  140 (238)
Q Consensus        81 ------------------~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g--~iv~i  140 (238)
                                        .+|.+|-.|..-..+.+.+..+..  +..+.+-+++...++-.+.+.-..++...  .||.-
T Consensus       475 ~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsra--E~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLP  552 (866)
T COG4982         475 DEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRA--EFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLP  552 (866)
T ss_pred             cccccccCCcceecccccCcceeeecccCCccCccccCCchH--HHHHHHHHHHHHHHHHHhhhhccccCcccceEEEec
Confidence                              367787777665545555555443  33344555555444444433322222222  34544


Q ss_pred             ccccccccCCCCchhhHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCCceecC
Q psy14567        141 SSIAGKTALEGHTIYSASKAALDSITRTMALELGP-YNIRVNSVQPTVVMTQ  191 (238)
Q Consensus       141 sS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~~~-~~i~v~~i~PG~v~t~  191 (238)
                      +|-. +-.+.+..+|+-+|++++.++--+..|-.- .-+.+..-.-|+++..
T Consensus       553 gSPN-rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGT  603 (866)
T COG4982         553 GSPN-RGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGT  603 (866)
T ss_pred             CCCC-CCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccc
Confidence            4432 223456789999999999998776665421 1244455556776543

>KOG1202|consensus

Probab=98.39  E-value=8.6e-07  Score=82.17  Aligned_cols=155  Identities=19%  Similarity=0.187  Sum_probs=116.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHh-------HHHHHhhCCCceEEEeecCCHHHHHHHHHh---cCC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQAN-------LDSLKQAFPNVQTVQVDLQDWARTRAAVSK---VGP   81 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~-------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~---~g~   81 (238)
                      +..+|+||-||.|.+++..|..+|+ ++++++|+-=+       .....+.+-.+.+-..|++..+..+.++++   +++
T Consensus      1769 ksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~ 1848 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLGP 1848 (2376)
T ss_pred             ceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhccc
Confidence            3568899999999999999999999 68888887422       111222222344445677777777777754   488


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +-.++|.|.+....-+++.++++ |+..-+-.+.++.++-+.-...-..-   .-+|..||++...+..++..|+-+.++
T Consensus      1849 vGGiFnLA~VLRD~LiEnQt~kn-Fk~va~pK~~~Ti~LD~~sRe~C~~L---dyFv~FSSvscGRGN~GQtNYG~aNS~ 1924 (2376)
T KOG1202|consen 1849 VGGIFNLAAVLRDGLIENQTPKN-FKDVAKPKYSGTINLDRVSREICPEL---DYFVVFSSVSCGRGNAGQTNYGLANSA 1924 (2376)
T ss_pred             ccchhhHHHHHHhhhhcccChhH-HHhhhccceeeeeehhhhhhhhCccc---ceEEEEEeecccCCCCcccccchhhHH
Confidence            99999999888777788888888 89988888888888776654433221   256777888888888899999999999


Q ss_pred             HHHHHHHHHH
Q psy14567        162 LDSITRTMAL  171 (238)
Q Consensus       162 l~~l~~~l~~  171 (238)
                      ++.+|..-..
T Consensus      1925 MERiceqRr~ 1934 (2376)
T KOG1202|consen 1925 MERICEQRRH 1934 (2376)
T ss_pred             HHHHHHHhhh
Confidence            9999976443

>KOG1203|consensus

Probab=98.38  E-value=5e-06  Score=70.36  Aligned_cols=172  Identities=18%  Similarity=0.123  Sum_probs=107.3

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh-h--CCCceEEEeecCCHHHH-HHHHHhcC-
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ-A--FPNVQTVQVDLQDWART-RAAVSKVG-   80 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~--~~~~~~~~~D~~~~~~v-~~~~~~~g-   80 (238)
                      ....++..+++++||+|++|+-+++.|.++|+.|.++.|+.++.+++.. .  ......+..|...+.++ ...++.+. 
T Consensus        73 ~~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~  152 (411)
T KOG1203|consen   73 NNNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPK  152 (411)
T ss_pred             CCCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccc
Confidence            4455677788899999999999999999999999999999998877755 1  12344444454444333 33444432 


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ...+++-++|..+...  +      ..-..++...+..++.+++...    + -.+++++||+.+.........+..  .
T Consensus       153 ~~~~v~~~~ggrp~~e--d------~~~p~~VD~~g~knlvdA~~~a----G-vk~~vlv~si~~~~~~~~~~~~~~--~  217 (411)
T KOG1203|consen  153 GVVIVIKGAGGRPEEE--D------IVTPEKVDYEGTKNLVDACKKA----G-VKRVVLVGSIGGTKFNQPPNILLL--N  217 (411)
T ss_pred             cceeEEecccCCCCcc--c------CCCcceecHHHHHHHHHHHHHh----C-CceEEEEEeecCcccCCCchhhhh--h
Confidence            2456666776543221  1      1222346667888888887332    2 348999999988665444333332  1


Q ss_pred             HHHHHHH-HHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        161 ALDSITR-TMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       161 al~~l~~-~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      ++..-.+ .....+...|+.-..|.||-.....
T Consensus       218 ~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~  250 (411)
T KOG1203|consen  218 GLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQDT  250 (411)
T ss_pred             hhhhHHHHhHHHHHHhcCCCcEEEeccccccCC
Confidence            1111121 2223344567888888999887654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.37  E-value=1.3e-05  Score=60.04  Aligned_cols=148  Identities=11%  Similarity=0.078  Sum_probs=98.2

Q ss_pred             CCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCCC
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFD   95 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~~   95 (238)
                      .|-||||..|..++++...+|..|.++.||.+++...    +.+...+.|+.|++++.+.+.   ..|+||..-|.....
T Consensus         4 aiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----~~~~i~q~Difd~~~~a~~l~---g~DaVIsA~~~~~~~   76 (211)
T COG2910           4 AIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----QGVTILQKDIFDLTSLASDLA---GHDAVISAFGAGASD   76 (211)
T ss_pred             EEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----ccceeecccccChhhhHhhhc---CCceEEEeccCCCCC
Confidence            3449999999999999999999999999999887544    467789999999998866665   579999988866321


Q ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc----------cCCCCchhhHHHHHHHHH
Q psy14567         96 RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT----------ALEGHTIYSASKAALDSI  165 (238)
Q Consensus        96 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~~~y~~sK~al~~l  165 (238)
                            .+.   ..    ...    .+.+...++..+ ..|++.++...+..          |..+...|..+++.-+. 
T Consensus        77 ------~~~---~~----~k~----~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~-  137 (211)
T COG2910          77 ------NDE---LH----SKS----IEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEF-  137 (211)
T ss_pred             ------hhH---HH----HHH----HHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHH-
Confidence                  111   11    111    344555555444 57888887766532          22223344555544432 


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      .+.|..+   ..+.-+-++|..+-.|-
T Consensus       138 L~~Lr~~---~~l~WTfvSPaa~f~PG  161 (211)
T COG2910         138 LDSLRAE---KSLDWTFVSPAAFFEPG  161 (211)
T ss_pred             HHHHhhc---cCcceEEeCcHHhcCCc
Confidence            2333333   34777888998876663

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.35  E-value=1.7e-06  Score=72.89  Aligned_cols=75  Identities=20%  Similarity=0.228  Sum_probs=65.1

Q ss_pred             CCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      ++|-|+ |+||+.+|..|+++| .+|.+.+|+.++.+++.... +.++..++|+.|.+.+.+++++.   |++|+++..+
T Consensus         4 ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~---d~VIn~~p~~   79 (389)
T COG1748           4 ILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDF---DLVINAAPPF   79 (389)
T ss_pred             EEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcC---CEEEEeCCch
Confidence            445466 999999999999999 79999999999999887664 57999999999999999999864   9999999765


Q ss_pred             C
Q psy14567         93 R   93 (238)
Q Consensus        93 ~   93 (238)
                      .
T Consensus        80 ~   80 (389)
T COG1748          80 V   80 (389)
T ss_pred             h
Confidence            3

>KOG1431|consensus

Probab=98.23  E-value=6.9e-07  Score=68.88  Aligned_cols=188  Identities=18%  Similarity=0.135  Sum_probs=111.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCC---EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEA---IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.+++||++|=+|++|.+.+.+.|.   +-+..+..                 .+|+++.+++++++++. ++-++||.|
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-----------------d~DLt~~a~t~~lF~~e-kPthVIhlA   63 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-----------------DADLTNLADTRALFESE-KPTHVIHLA   63 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc-----------------cccccchHHHHHHHhcc-CCceeeehH
Confidence            4577899999999999999998764   23322222                 48999999999999887 578888888


Q ss_pred             CCCCCCCCCCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccc--------------cc--cCCCC
Q psy14567         90 AVARFDRFLDID-EENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAG--------------KT--ALEGH  152 (238)
Q Consensus        90 g~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--------------~~--~~~~~  152 (238)
                      +...- -+.... ..+.|+.    |+.-.-++++.+..+-.+     ++++..|..-              +.  +-+..
T Consensus        64 AmVGG-lf~N~~ynldF~r~----Nl~indNVlhsa~e~gv~-----K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN  133 (315)
T KOG1431|consen   64 AMVGG-LFHNNTYNLDFIRK----NLQINDNVLHSAHEHGVK-----KVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSN  133 (315)
T ss_pred             hhhcc-hhhcCCCchHHHhh----cceechhHHHHHHHhchh-----hhhhhcceeecCCCCCCCCCHHHhccCCCCCCc
Confidence            54321 111111 1221333    332222333333332221     2333322211              11  12345


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccC------------------CCCCCCccCCcccCCCCCC
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT------------------GWSDPAKAGPMLAKTPLGR  214 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~------------------~~~~~~~~~~~~~~~~~~r  214 (238)
                      ..|+.+|..+.-..+.++.+++.   ...++.|-.+-.|--.-                  ..+..+...-+....|++.
T Consensus       134 ~gYsyAKr~idv~n~aY~~qhg~---~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRq  210 (315)
T KOG1431|consen  134 FGYSYAKRMIDVQNQAYRQQHGR---DYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQ  210 (315)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCC---ceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHH
Confidence            68999998877777888777643   44555555554432110                  0011223344567889999


Q ss_pred             cCCCCCccccccccccc
Q psy14567        215 FAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       215 ~~~~~~ia~~~~~l~s~  231 (238)
                      +.-.+|.|+++.|++.+
T Consensus       211 Fiys~DLA~l~i~vlr~  227 (315)
T KOG1431|consen  211 FIYSDDLADLFIWVLRE  227 (315)
T ss_pred             HhhHhHHHHHHHHHHHh
Confidence            99999999999998765

>KOG2865|consensus

Probab=98.21  E-value=9.2e-06  Score=64.94  Aligned_cols=132  Identities=19%  Similarity=0.183  Sum_probs=91.3

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-HHH--HHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-LDS--LKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~--~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      |+-+-||||.+|+-++.+|++.|..|++=.|-.+. ...  +.-.++.+.+...|+.|+++++++++.   -+++||..|
T Consensus        63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~---sNVVINLIG  139 (391)
T KOG2865|consen   63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKH---SNVVINLIG  139 (391)
T ss_pred             EEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHh---CcEEEEeec
Confidence            44457999999999999999999999998876542 222  233445788999999999999999985   589999998


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      .--+..  ..+.       .++|+.++-.+.+.+...-     --+.|.+|+..+..  ....-|--+|++-+-
T Consensus       140 rd~eTk--nf~f-------~Dvn~~~aerlAricke~G-----VerfIhvS~Lganv--~s~Sr~LrsK~~gE~  197 (391)
T KOG2865|consen  140 RDYETK--NFSF-------EDVNVHIAERLARICKEAG-----VERFIHVSCLGANV--KSPSRMLRSKAAGEE  197 (391)
T ss_pred             cccccC--Cccc-------ccccchHHHHHHHHHHhhC-----hhheeehhhccccc--cChHHHHHhhhhhHH
Confidence            542111  1122       2477777777766664322     24889998887543  223455556655444

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.17  E-value=5.4e-06  Score=70.95  Aligned_cols=73  Identities=21%  Similarity=0.179  Sum_probs=59.1

Q ss_pred             CCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhh--CCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQA--FPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      +|-|+ |.+|+.+++.|++++-  +|++.+|+.++++++.+.  ..++...++|+.|.+++.+++++   -|++||++|.
T Consensus         2 lvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~---~dvVin~~gp   77 (386)
T PF03435_consen    2 LVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRG---CDVVINCAGP   77 (386)
T ss_dssp             EEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTT---SSEEEE-SSG
T ss_pred             EEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhc---CCEEEECCcc
Confidence            56688 9999999999999874  899999999999988874  45799999999999999999885   4999999986


Q ss_pred             C
Q psy14567         92 A   92 (238)
Q Consensus        92 ~   92 (238)
                      +
T Consensus        78 ~   78 (386)
T PF03435_consen   78 F   78 (386)
T ss_dssp             G
T ss_pred             c
Confidence            5

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.11  E-value=3.5e-06  Score=61.20  Aligned_cols=77  Identities=19%  Similarity=0.234  Sum_probs=57.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.+.++|-|+ ||.|++++..|++.|+ +|.++.|+.++++++.+.++...+-.+++.+..   +..+   +.|++|++.
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~---~~~~---~~DivI~aT   83 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLE---EALQ---EADIVINAT   83 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHC---HHHH---TESEEEE-S
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHH---HHHh---hCCeEEEec
Confidence            4445555665 8999999999999999 499999999999999888755445555664433   4444   479999999


Q ss_pred             CCCCC
Q psy14567         90 AVARF   94 (238)
Q Consensus        90 g~~~~   94 (238)
                      +...+
T Consensus        84 ~~~~~   88 (135)
T PF01488_consen   84 PSGMP   88 (135)
T ss_dssp             STTST
T ss_pred             CCCCc
Confidence            87643

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG1221|consensus

Probab=98.08  E-value=8.2e-05  Score=64.13  Aligned_cols=164  Identities=21%  Similarity=0.319  Sum_probs=106.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCC--C-EEEEecCChH------hH---------HHHHhhCC----CceEEEeecCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHE--A-IIIALSKTQA------NL---------DSLKQAFP----NVQTVQVDLQD   68 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G--~-~V~~~~r~~~------~~---------~~~~~~~~----~~~~~~~D~~~   68 (238)
                      +.++++||||||.+|.-+...|++.-  . ++++.-|...      ++         +.+.+..+    .+..+..|+++
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~   90 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE   90 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence            46788999999999999999998753  2 6777766532      11         12222322    36667778876


Q ss_pred             H------HHHHHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         69 W------ARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        69 ~------~~v~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      +      .+++.+.+   .+|++||+|+.....       +. .+..+.+|..|+..+++.+.....-    ...+++|+
T Consensus        91 ~~LGis~~D~~~l~~---eV~ivih~AAtvrFd-------e~-l~~al~iNt~Gt~~~l~lak~~~~l----~~~vhVST  155 (467)
T KOG1221|consen   91 PDLGISESDLRTLAD---EVNIVIHSAATVRFD-------EP-LDVALGINTRGTRNVLQLAKEMVKL----KALVHVST  155 (467)
T ss_pred             cccCCChHHHHHHHh---cCCEEEEeeeeeccc-------hh-hhhhhhhhhHhHHHHHHHHHHhhhh----heEEEeeh
Confidence            4      33343334   589999999876421       22 6777899999999999988765532    36777776


Q ss_pred             ccccc--------cCC--------------------------------CCchhhHHHHHHHHHHHHHHHHhCCCCeEEEE
Q psy14567        143 IAGKT--------ALE--------------------------------GHTIYSASKAALDSITRTMALELGPYNIRVNS  182 (238)
Q Consensus       143 ~~~~~--------~~~--------------------------------~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~  182 (238)
                      .-..-        +.+                                ...-|+-+|+-.+++...-+     .++.+..
T Consensus       156 Ay~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-----~~lPivI  230 (467)
T KOG1221|consen  156 AYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-----ENLPLVI  230 (467)
T ss_pred             hheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-----cCCCeEE
Confidence            44320        000                                12356666766666554433     3577888


Q ss_pred             EeCCceecCccc
Q psy14567        183 VQPTVVMTQMGR  194 (238)
Q Consensus       183 i~PG~v~t~~~~  194 (238)
                      +.|.++-+...+
T Consensus       231 iRPsiI~st~~E  242 (467)
T KOG1221|consen  231 IRPSIITSTYKE  242 (467)
T ss_pred             EcCCceeccccC
Confidence            999999876654

>PLN00106 malate dehydrogenase

Probab=98.02  E-value=6.8e-05  Score=62.35  Aligned_cols=147  Identities=14%  Similarity=0.111  Sum_probs=90.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhH--HHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANL--DSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~--~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      +...++|+|++|.+|.+++..|+..+.  .++++++++...  .++.+.....  ...++++.++..+.+   ...|++|
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~--~i~~~~~~~d~~~~l---~~aDiVV   91 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPA--QVRGFLGDDQLGDAL---KGADLVI   91 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCc--eEEEEeCCCCHHHHc---CCCCEEE
Confidence            445678899999999999999997664  799999877221  1222222222  223443333333333   3589999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-------------ccCCCCc
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-------------TALEGHT  153 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------------~~~~~~~  153 (238)
                      ++||.....   ..+    +...+..|......+.+.+    .+.. +..++++.|-...             .++++..
T Consensus        92 itAG~~~~~---g~~----R~dll~~N~~i~~~i~~~i----~~~~-p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~  159 (323)
T PLN00106         92 IPAGVPRKP---GMT----RDDLFNINAGIVKTLCEAV----AKHC-PNALVNIISNPVNSTVPIAAEVLKKAGVYDPKK  159 (323)
T ss_pred             EeCCCCCCC---CCC----HHHHHHHHHHHHHHHHHHH----HHHC-CCeEEEEeCCCccccHHHHHHHHHHcCCCCcce
Confidence            999986431   122    4556777777765555554    4444 3345555443321             2355667


Q ss_pred             hhhHHHHHHHHHHHHHHHHhC
Q psy14567        154 IYSASKAALDSITRTMALELG  174 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~  174 (238)
                      .|+.++.--..|...++.++.
T Consensus       160 viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        160 LFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             EEEEecchHHHHHHHHHHHhC
Confidence            888887555667778888774

>PRK09620 hypothetical protein; Provisional

Probab=97.91  E-value=1.1e-05  Score=63.88  Aligned_cols=73  Identities=22%  Similarity=0.196  Sum_probs=43.7

Q ss_pred             CCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCce--EEEeecCCHHHHHHHHHhcCCccEEEEccCCCCCCC
Q psy14567         21 KPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQ--TVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDR   96 (238)
Q Consensus        21 s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~~~   96 (238)
                      ||.||.++|++|.++|++|+++++.......  .......  .+..|....+.+.+++++. ++|++||+|+...+.+
T Consensus        28 SGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~--~~~~~~~~~~V~s~~d~~~~l~~~~~~~-~~D~VIH~AAvsD~~~  102 (229)
T PRK09620         28 KGTIGRIIAEELISKGAHVIYLHGYFAEKPN--DINNQLELHPFEGIIDLQDKMKSIITHE-KVDAVIMAAAGSDWVV  102 (229)
T ss_pred             cCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc--ccCCceeEEEEecHHHHHHHHHHHhccc-CCCEEEECccccceec
Confidence            4999999999999999999988754321110  0001222  2333222223444444322 5899999999875543

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.77  E-value=0.00023  Score=59.23  Aligned_cols=157  Identities=17%  Similarity=0.153  Sum_probs=92.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCC--CEEEEecCChHhH--HHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANL--DSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~--~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      +++.++|+|++|.||.+++..|+..+  .+++++++.....  .++.+...  .....+.+|+.+..+.++   .-|++|
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~l~---gaDvVV   81 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDT--PAKVTGYADGELWEKALR---GADLVL   81 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCc--CceEEEecCCCchHHHhC---CCCEEE
Confidence            55577889999999999999998655  4899999843221  12322222  223445655444233333   579999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccc-------------cccCCCCc
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAG-------------KTALEGHT  153 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-------------~~~~~~~~  153 (238)
                      +++|.... +  ..   + +...++.|....-.+.+++.    +.+ ..++++++|-..             ..++++..
T Consensus        82 itaG~~~~-~--~~---t-R~dll~~N~~i~~~i~~~i~----~~~-~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~  149 (321)
T PTZ00325         82 ICAGVPRK-P--GM---T-RDDLFNTNAPIVRDLVAAVA----SSA-PKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRK  149 (321)
T ss_pred             ECCCCCCC-C--CC---C-HHHHHHHHHHHHHHHHHHHH----HHC-CCeEEEEecCcHHHHHHHHHhhhhhccCCChhh
Confidence            99997532 1  12   2 45667888887766666654    444 346777766332             22345566


Q ss_pred             hhhHHHHHHHH--HHHHHHHHhCCCCeEEEEEeCCceec
Q psy14567        154 IYSASKAALDS--ITRTMALELGPYNIRVNSVQPTVVMT  190 (238)
Q Consensus       154 ~y~~sK~al~~--l~~~l~~~~~~~~i~v~~i~PG~v~t  190 (238)
                      .|+.+  .|++  |-..++..+   |+....|. ++|-.
T Consensus       150 viG~g--~LDs~R~r~~la~~l---~v~~~~V~-~~VlG  182 (321)
T PTZ00325        150 LFGVT--TLDVVRARKFVAEAL---GMNPYDVN-VPVVG  182 (321)
T ss_pred             eeech--hHHHHHHHHHHHHHh---CcChhheE-EEEEe
Confidence            77775  2543  333455554   45545555 44443

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.77  E-value=5.4e-05  Score=63.17  Aligned_cols=115  Identities=13%  Similarity=0.140  Sum_probs=64.9

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCC-------CEEEEecCChHh--HHHHHhhCCCce-EEEeecCCHHHHHHHHHhcCCcc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHE-------AIIIALSKTQAN--LDSLKQAFPNVQ-TVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G-------~~V~~~~r~~~~--~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      .++||||+|.+|.+++..|+..+       ..|++++++++.  ++.......+.. ....|++...+..   +.+...|
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~---~~l~~aD   80 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPE---EAFKDVD   80 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHH---HHhCCCC
Confidence            36889999999999999998744       489999996532  221111111100 1112333222322   3334689


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEEcc
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK-IQGSIVNVSS  142 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~isS  142 (238)
                      +|||+||.....   ..+..    ..++.|+.    +++...+.+.+.. +.+.++.+|.
T Consensus        81 iVI~tAG~~~~~---~~~R~----~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          81 VAILVGAMPRKE---GMERK----DLLKANVK----IFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             EEEEeCCcCCCC---CCCHH----HHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecC
Confidence            999999986431   22322    23455554    3455555555542 3566777764

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.77  E-value=0.00044  Score=57.00  Aligned_cols=77  Identities=17%  Similarity=0.096  Sum_probs=56.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ...+++|+|+++++|.++++.+...|.+|++++++.++.+.+.+..  .. ..+|..+++..+.+.+..  .++|.++++
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g--~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  220 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAG--AD-AVFNYRAEDLADRILAATAGQGVDVIIEV  220 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC--CC-EEEeCCCcCHHHHHHHHcCCCceEEEEEC
Confidence            4567889999999999999999999999999999988877775432  22 224555544444443322  369999998


Q ss_pred             cC
Q psy14567         89 AA   90 (238)
Q Consensus        89 ag   90 (238)
                      +|
T Consensus       221 ~~  222 (325)
T cd08253         221 LA  222 (325)
T ss_pred             Cc
Confidence            86

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.72  E-value=0.00011  Score=61.39  Aligned_cols=73  Identities=15%  Similarity=0.180  Sum_probs=54.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhC-C-CEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQH-E-AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      .+.++++||||+|.||+.++++|++. | .++++++|+.+++.++..++..     .|+.   ++.+.+   ...|++|+
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~-----~~i~---~l~~~l---~~aDiVv~  221 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG-----GKIL---SLEEAL---PEADIVVW  221 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc-----ccHH---hHHHHH---ccCCEEEE
Confidence            35577899999999999999999864 6 4899999999988888765431     2332   233343   35899999


Q ss_pred             ccCCCC
Q psy14567         88 NAAVAR   93 (238)
Q Consensus        88 ~ag~~~   93 (238)
                      +++...
T Consensus       222 ~ts~~~  227 (340)
T PRK14982        222 VASMPK  227 (340)
T ss_pred             CCcCCc
Confidence            998754

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.64  E-value=9.5e-05  Score=64.61  Aligned_cols=74  Identities=12%  Similarity=0.100  Sum_probs=53.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh-HhHHHHHhhC--CCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ-ANLDSLKQAF--PNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      +.+.++|+|+++ +|.++|+.|++.|++|.+++++. +.+++..++.  .++.++..|..+        +..+.+|++|+
T Consensus         4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~--------~~~~~~d~vv~   74 (450)
T PRK14106          4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE--------EFLEGVDLVVV   74 (450)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch--------hHhhcCCEEEE
Confidence            345567788777 99999999999999999999975 3333322222  146677778765        12346899999


Q ss_pred             ccCCCC
Q psy14567         88 NAAVAR   93 (238)
Q Consensus        88 ~ag~~~   93 (238)
                      ++|+..
T Consensus        75 ~~g~~~   80 (450)
T PRK14106         75 SPGVPL   80 (450)
T ss_pred             CCCCCC
Confidence            999753

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.57  E-value=0.00018  Score=53.24  Aligned_cols=75  Identities=17%  Similarity=0.241  Sum_probs=53.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.+.++|+|+ |++|.++++.|.+.| .+|.+.+|+.++.+++.+..... .+..+..+.++.      +...|++|++.
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~Dvvi~~~   89 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL-GIAIAYLDLEEL------LAEADLIINTT   89 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-ccceeecchhhc------cccCCEEEeCc
Confidence            4456778887 899999999999986 78999999998888776654321 122344444332      34689999999


Q ss_pred             CCCC
Q psy14567         90 AVAR   93 (238)
Q Consensus        90 g~~~   93 (238)
                      +...
T Consensus        90 ~~~~   93 (155)
T cd01065          90 PVGM   93 (155)
T ss_pred             CCCC
Confidence            7654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>KOG2774|consensus

Probab=97.56  E-value=0.0001  Score=57.52  Aligned_cols=161  Identities=19%  Similarity=0.189  Sum_probs=102.2

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhh-CCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQ-HEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~-~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      ..+...++|||+-|.+|..+|+.|.. .|. .|++.+..... +.+..   +-.++..|+-|...+++++-. .++|-+|
T Consensus        41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-~~V~~---~GPyIy~DILD~K~L~eIVVn-~RIdWL~  115 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-ANVTD---VGPYIYLDILDQKSLEEIVVN-KRIDWLV  115 (366)
T ss_pred             cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-hhhcc---cCCchhhhhhccccHHHhhcc-cccceee
Confidence            34566789999999999999999964 476 55555443322 22332   334677899888888887633 2689999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-------------CCCc
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-------------EGHT  153 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------~~~~  153 (238)
                      |-......-.  +.+    ..-..++|+.|.-++++.+..+-       --+|+-|.-|..++             .+..
T Consensus       116 HfSALLSAvG--E~N----VpLA~~VNI~GvHNil~vAa~~k-------L~iFVPSTIGAFGPtSPRNPTPdltIQRPRT  182 (366)
T KOG2774|consen  116 HFSALLSAVG--ETN----VPLALQVNIRGVHNILQVAAKHK-------LKVFVPSTIGAFGPTSPRNPTPDLTIQRPRT  182 (366)
T ss_pred             eHHHHHHHhc--ccC----CceeeeecchhhhHHHHHHHHcC-------eeEeecccccccCCCCCCCCCCCeeeecCce
Confidence            9876432211  111    23335799999988888875432       33455443332221             2457


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEE-eCCceec
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSV-QPTVVMT  190 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i-~PG~v~t  190 (238)
                      .|+.||.-.+-+.+.+...+   |+.+.++ .||.+..
T Consensus       183 IYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is~  217 (366)
T KOG2774|consen  183 IYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIISA  217 (366)
T ss_pred             eechhHHHHHHHHHHHHhhc---CccceecccCccccc
Confidence            99999999998888877665   3433332 4666643

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.51  E-value=0.00023  Score=58.20  Aligned_cols=76  Identities=17%  Similarity=0.205  Sum_probs=53.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      .+.+.++|.|+ ||+|++++..|+..| .+|.+++|+.++.+++.+.+.....+..+.    +..   +.+...|++||+
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~----~~~---~~~~~~DivIna  192 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL----ELQ---EELADFDLIINA  192 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc----cch---hccccCCEEEEC
Confidence            34556777886 899999999999999 699999999999888877654321011111    111   222457999999


Q ss_pred             cCCCC
Q psy14567         89 AAVAR   93 (238)
Q Consensus        89 ag~~~   93 (238)
                      .....
T Consensus       193 Tp~g~  197 (278)
T PRK00258        193 TSAGM  197 (278)
T ss_pred             CcCCC
Confidence            97653

>KOG2733|consensus

Probab=97.48  E-value=0.00053  Score=56.66  Aligned_cols=75  Identities=12%  Similarity=0.051  Sum_probs=63.1

Q ss_pred             CCCCCCCCchHHHHHHHHhh----CCCEEEEecCChHhHHHHHhhCC--------CceEEEeecCCHHHHHHHHHhcCCc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQ----HEAIIIALSKTQANLDSLKQAFP--------NVQTVQVDLQDWARTRAAVSKVGPV   82 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~----~G~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~D~~~~~~v~~~~~~~g~i   82 (238)
                      ++|-||||.-|.-++.++..    .|....+.+||+++++++.+...        +..++.||.+|++++.+..++   -
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~---~   84 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ---A   84 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh---h
Confidence            46789999999999999998    68889999999999887655442        334788999999999999986   4


Q ss_pred             cEEEEccCCC
Q psy14567         83 DVLINNAAVA   92 (238)
Q Consensus        83 d~li~~ag~~   92 (238)
                      .+++||+|-.
T Consensus        85 ~vivN~vGPy   94 (423)
T KOG2733|consen   85 RVIVNCVGPY   94 (423)
T ss_pred             EEEEeccccc
Confidence            8999999965

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.37  E-value=0.00065  Score=55.28  Aligned_cols=75  Identities=16%  Similarity=0.194  Sum_probs=52.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.+.++|+|+ ||+|++++..|++.|++|.+++|+.++.+++.+.......... .+ .++   .  .....|++|++.+
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~-~~-~~~---~--~~~~~DivInatp  187 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQA-FS-MDE---L--PLHRVDLIINATS  187 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEE-ec-hhh---h--cccCccEEEECCC
Confidence            3566788888 6999999999999999999999999888877766432110111 11 111   1  1235899999998


Q ss_pred             CCC
Q psy14567         91 VAR   93 (238)
Q Consensus        91 ~~~   93 (238)
                      ...
T Consensus       188 ~gm  190 (270)
T TIGR00507       188 AGM  190 (270)
T ss_pred             CCC
Confidence            753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.32  E-value=0.00077  Score=60.05  Aligned_cols=74  Identities=16%  Similarity=0.097  Sum_probs=52.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+..+. ..  .++   ++..+...  ...|++||++.
T Consensus       378 ~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~-~~--~~~---~~~~~~~~--~~~diiINtT~  448 (529)
T PLN02520        378 AGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVGG-QA--LTL---ADLENFHP--EEGMILANTTS  448 (529)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCC-ce--eeH---hHhhhhcc--ccCeEEEeccc
Confidence            4567889998 6999999999999999999999999998888776532 11  122   22221111  13588898886


Q ss_pred             CCC
Q psy14567         91 VAR   93 (238)
Q Consensus        91 ~~~   93 (238)
                      ...
T Consensus       449 vGm  451 (529)
T PLN02520        449 VGM  451 (529)
T ss_pred             CCC
Confidence            553

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.31  E-value=0.0016  Score=47.64  Aligned_cols=107  Identities=13%  Similarity=0.199  Sum_probs=63.5

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhC-------CCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      +.|.|++|.+|.+++..|...+.  ++++++++++.++.....+       +.-..+..  .+.+       .+..-|++
T Consensus         3 V~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~~-------~~~~aDiv   73 (141)
T PF00056_consen    3 VAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDYE-------ALKDADIV   73 (141)
T ss_dssp             EEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSGG-------GGTTESEE
T ss_pred             EEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--cccc-------ccccccEE
Confidence            35679999999999999998874  7999999987654333222       11111111  2222       22347999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEc
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS  141 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~is  141 (238)
                      |.++|....   ..++..+    .++.|..-    ++...+.+.+..+.+.++.+|
T Consensus        74 vitag~~~~---~g~sR~~----ll~~N~~i----~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   74 VITAGVPRK---PGMSRLD----LLEANAKI----VKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             EETTSTSSS---TTSSHHH----HHHHHHHH----HHHHHHHHHHHSTTSEEEE-S
T ss_pred             EEecccccc---ccccHHH----HHHHhHhH----HHHHHHHHHHhCCccEEEEeC
Confidence            999997532   1233332    34455444    455555555554467777665

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd00704 MDH Malate dehydrogenase

Probab=97.22  E-value=0.0014  Score=54.60  Aligned_cols=107  Identities=19%  Similarity=0.144  Sum_probs=65.4

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-------EEEEecCCh--HhHHHHHhhCCCceEEEeecCCHH-------HH-HHHHH
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-------IIIALSKTQ--ANLDSLKQAFPNVQTVQVDLQDWA-------RT-RAAVS   77 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~D~~~~~-------~v-~~~~~   77 (238)
                      +.||||+|.+|.+++..|+..|.       .++++++++  +.          .+....|+.+..       .+ ....+
T Consensus         3 V~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~----------~~g~~~Dl~d~~~~~~~~~~i~~~~~~   72 (323)
T cd00704           3 VLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKA----------LEGVVMELQDCAFPLLKGVVITTDPEE   72 (323)
T ss_pred             EEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCc----------cceeeeehhhhcccccCCcEEecChHH
Confidence            57899999999999999987653       489999887  32          223334444331       00 11223


Q ss_pred             hcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEcc
Q psy14567         78 KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH-KIQGSIVNVSS  142 (238)
Q Consensus        78 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~g~iv~isS  142 (238)
                      .+..-|++|+.||.....   .++..+    .++.|    ..+++...+.+.+. ++.+.++.+|-
T Consensus        73 ~~~~aDiVVitAG~~~~~---g~tR~d----ll~~N----~~i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          73 AFKDVDVAILVGAFPRKP---GMERAD----LLRKN----AKIFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             HhCCCCEEEEeCCCCCCc---CCcHHH----HHHHh----HHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            334689999999975321   233332    23444    44556666666666 34677777753

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.21  E-value=0.002  Score=53.59  Aligned_cols=77  Identities=17%  Similarity=0.181  Sum_probs=57.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ....++|+|+++++|.++++.+...|++|+.+++++++.+.+... .. . ...|..+.+..+.+.+..  +++|+++++
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~~  242 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKEL-GA-D-YVIDYRKEDFVREVRELTGKRGVDVVVEH  242 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CC-C-eEEecCChHHHHHHHHHhCCCCCcEEEEC
Confidence            445788999999999999999999999999999998887766432 21 1 224666655555555433  369999999


Q ss_pred             cC
Q psy14567         89 AA   90 (238)
Q Consensus        89 ag   90 (238)
                      +|
T Consensus       243 ~g  244 (342)
T cd08266         243 VG  244 (342)
T ss_pred             Cc
Confidence            87

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.20  E-value=0.0022  Score=53.38  Aligned_cols=115  Identities=10%  Similarity=0.142  Sum_probs=68.9

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhCCCceEE--Eeec--CCHHHHHHHHHhcCCc
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNVQTV--QVDL--QDWARTRAAVSKVGPV   82 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~--~~D~--~~~~~v~~~~~~~g~i   82 (238)
                      +++.+.+.|.|+ |++|.+++..|+..|.  .+++++++++.++.....+.+...+  ...+  .+.+       .+..-
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~~~~~-------~~~~a   74 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYAGDYS-------DCKDA   74 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEeCCHH-------HhCCC
Confidence            344556677897 9999999999998887  7999999887655443333221100  1111  1222       22346


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      |++|..||.... +  .++..+    .++.|..    +++...+.+.+..+.+.++.+|-
T Consensus        75 divIitag~~~k-~--g~~R~d----ll~~N~~----i~~~i~~~i~~~~~~~~vivvsN  123 (315)
T PRK00066         75 DLVVITAGAPQK-P--GETRLD----LVEKNLK----IFKSIVGEVMASGFDGIFLVASN  123 (315)
T ss_pred             CEEEEecCCCCC-C--CCCHHH----HHHHHHH----HHHHHHHHHHHhCCCeEEEEccC
Confidence            999999998532 1  233333    2344444    34454555555554677777764

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.16  E-value=0.0015  Score=54.30  Aligned_cols=75  Identities=21%  Similarity=0.203  Sum_probs=53.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ....++|+|+++++|.++++.+...|.+|+.+.++.++.+.+.... .-..+  |..+   ..+.+.+.+++|++++++|
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~--~~~~---~~~~~~~~~~~d~v~~~~g  235 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELG-ADYVI--DGSK---FSEDVKKLGGADVVIELVG  235 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcC-CcEEE--ecHH---HHHHHHhccCCCEEEECCC
Confidence            3457889999999999999999999999999999888776664432 21112  2211   3344444457999999987


Q ss_pred             C
Q psy14567         91 V   91 (238)
Q Consensus        91 ~   91 (238)
                      .
T Consensus       236 ~  236 (332)
T cd08259         236 S  236 (332)
T ss_pred             h
Confidence            4

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.16  E-value=0.0019  Score=53.86  Aligned_cols=77  Identities=9%  Similarity=0.086  Sum_probs=53.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ...+++|+|++|++|..++..+...|++|+.++++.++.+.+.+...+ .+  .|..+.+...+.++..  +++|+++.+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~-~v--i~~~~~~~~~~~~~~~~~~gvdvv~d~  214 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFD-VA--FNYKTVKSLEETLKKASPDGYDCYFDN  214 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC-EE--EeccccccHHHHHHHhCCCCeEEEEEC
Confidence            456788999999999999988888999999999998888777543321 22  2333222233333332  358999988


Q ss_pred             cC
Q psy14567         89 AA   90 (238)
Q Consensus        89 ag   90 (238)
                      .|
T Consensus       215 ~G  216 (325)
T TIGR02825       215 VG  216 (325)
T ss_pred             CC
Confidence            76

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.15  E-value=0.0068  Score=62.92  Aligned_cols=172  Identities=14%  Similarity=0.107  Sum_probs=103.4

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEEEEc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLINN   88 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~li~~   88 (238)
                      ..+++++..++++.+++..|.+.|..|+++.....-..........+..+...-.+.+++..+++.    .+.++.+||.
T Consensus      1756 ~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~l 1835 (2582)
T TIGR02813      1756 ANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVVSHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTAQIDGFIHL 1835 (2582)
T ss_pred             ceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccccccccccccccccccccccchHHHHHHHHhhhccccccceEEEe
Confidence            344555667889999999999999998876422111000000001122333444455556555443    3779999998


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchh--------hHHHH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIY--------SASKA  160 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y--------~~sK~  160 (238)
                      .+...... ...+... ....-...+...|.+.|.+.+.+...+ .+.++.++...|..+.......        ....+
T Consensus      1836 ~~~~~~~~-~~~~~~~-~~~~~~~~l~~~f~~ak~~~~~l~~~~-~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~~~~~a 1912 (2582)
T TIGR02813      1836 QPQHKSVA-DKVDAIE-LPEAAKQSLMLAFLFAKLLNVKLATNA-RASFVTVSRIDGGFGYSNGDADSGTQQVKAELNQA 1912 (2582)
T ss_pred             cccccccc-ccccccc-cchhhHHHHHHHHHHHHhhchhhccCC-CeEEEEEEecCCccccCCccccccccccccchhhh
Confidence            87553210 0000000 111112345556777777766655433 5688888888877665433221        23578


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTV  187 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~  187 (238)
                      ++.+|+|+++.|+..-.+|...+.|..
T Consensus      1913 ~l~Gl~Ktl~~E~P~~~~r~vDl~~~~ 1939 (2582)
T TIGR02813      1913 ALAGLTKTLNHEWNAVFCRALDLAPKL 1939 (2582)
T ss_pred             hHHHHHHhHHHHCCCCeEEEEeCCCCc
Confidence            999999999999998888888888864

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.14  E-value=0.0028  Score=53.22  Aligned_cols=75  Identities=11%  Similarity=0.057  Sum_probs=52.2

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNA   89 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~a   89 (238)
                      .+++|+||+|++|..++..+...|+ +|+.+++++++.+.+.++++--.+  .|..++ +..+.+.+.  +++|+++.+.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~v--i~~~~~-~~~~~i~~~~~~gvd~vid~~  232 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAA--INYKTD-NVAERLRELCPEGVDVYFDNV  232 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEE--EECCCC-CHHHHHHHHCCCCceEEEECC
Confidence            6789999999999999988888898 899999999888777664432222  233221 122222222  4699999887


Q ss_pred             C
Q psy14567         90 A   90 (238)
Q Consensus        90 g   90 (238)
                      |
T Consensus       233 g  233 (345)
T cd08293         233 G  233 (345)
T ss_pred             C
Confidence            7

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.11  E-value=0.0017  Score=56.07  Aligned_cols=73  Identities=12%  Similarity=0.130  Sum_probs=52.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      ..+.+++-|+ ||+|+.+++.|+..|+ +++++.|+.++.+++.++++...     +...+++.+.+.   .-|++|++.
T Consensus       180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~-----~~~~~~l~~~l~---~aDiVI~aT  250 (414)
T PRK13940        180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNAS-----AHYLSELPQLIK---KADIIIAAV  250 (414)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCe-----EecHHHHHHHhc---cCCEEEECc
Confidence            3344555665 8999999999999996 79999999999999988765322     222344444444   468888888


Q ss_pred             CCC
Q psy14567         90 AVA   92 (238)
Q Consensus        90 g~~   92 (238)
                      +..
T Consensus       251 ~a~  253 (414)
T PRK13940        251 NVL  253 (414)
T ss_pred             CCC
Confidence            653

>PRK06849 hypothetical protein; Provisional

Probab=97.10  E-value=0.0019  Score=55.36  Aligned_cols=79  Identities=13%  Similarity=0.053  Sum_probs=52.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCH----HHHHHHHHhcCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDW----ARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~----~~v~~~~~~~g~id~li   86 (238)
                      +.++++|||++.++|.++++.|.+.|++|++++.+................++..-.++    +.+.+++++. ++|++|
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~-~id~vI   81 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRE-NIDLLI   81 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHc-CCCEEE
Confidence            45778999999999999999999999999999988755433322222222221122333    3334444443 589998


Q ss_pred             EccC
Q psy14567         87 NNAA   90 (238)
Q Consensus        87 ~~ag   90 (238)
                      -...
T Consensus        82 P~~e   85 (389)
T PRK06849         82 PTCE   85 (389)
T ss_pred             ECCh
Confidence            8775

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.08  E-value=0.0017  Score=54.14  Aligned_cols=145  Identities=13%  Similarity=0.148  Sum_probs=86.1

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC-------EEEEecCChHh--HHHHHhhCCCce-EE--EeecCCHHHHHHHHHhcCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA-------IIIALSKTQAN--LDSLKQAFPNVQ-TV--QVDLQDWARTRAAVSKVGP   81 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~--~~D~~~~~~v~~~~~~~g~   81 (238)
                      .+.|+|++|.+|.+++..|+..|.       .+++++++++.  ++.....+.+.. .+  ...++. +.    .+.+..
T Consensus         4 KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~-~~----~~~~~d   78 (322)
T cd01338           4 RVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITD-DP----NVAFKD   78 (322)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEec-Cc----HHHhCC
Confidence            456789999999999999998775       69999985432  221111111110 00  011111 11    122234


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEEccccc--------cc-cCCC
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK-IQGSIVNVSSIAG--------KT-ALEG  151 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~--------~~-~~~~  151 (238)
                      -|++|.+||.... +  .++..+    .++.|.    -+++.+.+.+.+.. +.+.++.+|.-.-        .. +.+.
T Consensus        79 aDivvitaG~~~k-~--g~tR~d----ll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~  147 (322)
T cd01338          79 ADWALLVGAKPRG-P--GMERAD----LLKANG----KIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPP  147 (322)
T ss_pred             CCEEEEeCCCCCC-C--CCcHHH----HHHHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCCh
Confidence            6999999997532 1  233333    234444    45566666666655 2677777765221        22 2556


Q ss_pred             CchhhHHHHHHHHHHHHHHHHhC
Q psy14567        152 HTIYSASKAALDSITRTMALELG  174 (238)
Q Consensus       152 ~~~y~~sK~al~~l~~~l~~~~~  174 (238)
                      ...|+.++.--..|...+++.+.
T Consensus       148 ~~ViG~t~LDs~Rl~~~la~~lg  170 (322)
T cd01338         148 DNFTAMTRLDHNRAKSQLAKKAG  170 (322)
T ss_pred             HheEEehHHHHHHHHHHHHHHhC
Confidence            66888888888888889998875

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.04  E-value=0.0046  Score=51.28  Aligned_cols=109  Identities=10%  Similarity=0.137  Sum_probs=64.9

Q ss_pred             CCCCCCCCchHHHHHHHHhhCC--CEEEEecCChHhHHHHHhhCCCce-----EEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANLDSLKQAFPNVQ-----TVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      ++|.|+ |++|.+++..|+..|  .+|++++|+++..+.....+.+..     ....-..+.++       +..-|++|+
T Consensus         3 I~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~~~~~~-------l~~aDIVIi   74 (306)
T cd05291           3 VVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKAGDYSD-------CKDADIVVI   74 (306)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEcCCHHH-------hCCCCEEEE
Confidence            345564 899999999999999  489999999887665544331110     00111122222       235799999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      ++|....   ..++..+    .++.|..    +++...+.+.+..+.+.++.+|.
T Consensus        75 tag~~~~---~g~~R~d----ll~~N~~----i~~~~~~~i~~~~~~~~vivvsN  118 (306)
T cd05291          75 TAGAPQK---PGETRLD----LLEKNAK----IMKSIVPKIKASGFDGIFLVASN  118 (306)
T ss_pred             ccCCCCC---CCCCHHH----HHHHHHH----HHHHHHHHHHHhCCCeEEEEecC
Confidence            9997532   1233333    2344444    44555555555554677777764

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.04  E-value=0.0021  Score=52.79  Aligned_cols=78  Identities=14%  Similarity=0.156  Sum_probs=55.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ...+++|+|+++++|..++..+...|++|++++++.++.+.+.+ .+ .. ...|..+.+....+.+..  +++|.++++
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g-~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRA-LG-AD-VAINYRTEDFAEEVKEATGGRGVDVILDM  215 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cC-CC-EEEeCCchhHHHHHHHHhCCCCeEEEEEC
Confidence            44677899999999999999999999999999999888777644 32 11 224444433333333322  369999999


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      +|.
T Consensus       216 ~g~  218 (323)
T cd05276         216 VGG  218 (323)
T ss_pred             Cch
Confidence            883

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.03  E-value=0.0041  Score=51.97  Aligned_cols=109  Identities=18%  Similarity=0.169  Sum_probs=65.5

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-------EEEEecCChHhHHHHHhhCCCceEEEeecCCHHH-H-------HHHHHhc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-------IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWAR-T-------RAAVSKV   79 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~-v-------~~~~~~~   79 (238)
                      ++|+|++|.+|.+++..|+..|.       .+++++++++.-        ..+....|+.|... .       ....+.+
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~--------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~   73 (324)
T TIGR01758         2 VVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK--------VLEGVVMELMDCAFPLLDGVVPTHDPAVAF   73 (324)
T ss_pred             EEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc--------ccceeEeehhcccchhcCceeccCChHHHh
Confidence            56889999999999999987553       488999865431        01233444444331 0       0112334


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEcc
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH-KIQGSIVNVSS  142 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~g~iv~isS  142 (238)
                      ...|++|++||.....   ..+    +...++.|+.    +++.+.+.+.+. .+.+.++.+|.
T Consensus        74 ~~aDiVVitAG~~~~~---~~t----r~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvsN  126 (324)
T TIGR01758        74 TDVDVAILVGAFPRKE---GME----RRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVGN  126 (324)
T ss_pred             CCCCEEEEcCCCCCCC---CCc----HHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence            4689999999975321   122    3444555554    446666666665 23567777664

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.03  E-value=0.0058  Score=52.05  Aligned_cols=73  Identities=15%  Similarity=0.103  Sum_probs=55.1

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      .++|.|+ |.+|+.+++.+...|++|++++|+.++++.+.+.++.  .+..+..+++.+.+.+.   ..|++|++++..
T Consensus       169 ~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~--~v~~~~~~~~~l~~~l~---~aDvVI~a~~~~  241 (370)
T TIGR00518       169 DVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG--RIHTRYSNAYEIEDAVK---RADLLIGAVLIP  241 (370)
T ss_pred             eEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc--eeEeccCCHHHHHHHHc---cCCEEEEccccC
Confidence            3555665 7899999999999999999999999888887766543  23345566666666654   579999998653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=97.00  E-value=0.0023  Score=53.23  Aligned_cols=78  Identities=10%  Similarity=0.045  Sum_probs=53.5

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEEc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLINN   88 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~~   88 (238)
                      +...+++|+||+|++|..+++.+...|++|+.+++++++.+.+.+... -.+  .|..+++..+++.+.. +.+|+++.+
T Consensus       142 ~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga-~~v--i~~~~~~~~~~v~~~~~~gvd~vld~  218 (329)
T cd08294         142 KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGF-DAV--FNYKTVSLEEALKEAAPDGIDCYFDN  218 (329)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC-CEE--EeCCCccHHHHHHHHCCCCcEEEEEC
Confidence            345678899999999999998888899999999999988877766332 222  3333322222221111 458999988


Q ss_pred             cC
Q psy14567         89 AA   90 (238)
Q Consensus        89 ag   90 (238)
                      .|
T Consensus       219 ~g  220 (329)
T cd08294         219 VG  220 (329)
T ss_pred             CC
Confidence            76

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.00  E-value=0.0018  Score=53.12  Aligned_cols=77  Identities=16%  Similarity=0.058  Sum_probs=51.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      .+.++|-|+ ||.|++++..|++.|+ +|.++.|+.++.+++.+.++....+ ..+...+++...   ....|++||+..
T Consensus       125 ~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~-~~~~~~~~~~~~---~~~~DiVInaTp  199 (282)
T TIGR01809       125 GFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVI-TRLEGDSGGLAI---EKAAEVLVSTVP  199 (282)
T ss_pred             CceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcc-eeccchhhhhhc---ccCCCEEEECCC
Confidence            344555554 8999999999999997 7999999999999887765321101 112111222222   245799999997


Q ss_pred             CCC
Q psy14567         91 VAR   93 (238)
Q Consensus        91 ~~~   93 (238)
                      ...
T Consensus       200 ~g~  202 (282)
T TIGR01809       200 ADV  202 (282)
T ss_pred             CCC
Confidence            653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.99  E-value=0.0034  Score=59.75  Aligned_cols=77  Identities=21%  Similarity=0.136  Sum_probs=63.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCC-CE-------------EEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHH
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHE-AI-------------IIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAV   76 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   76 (238)
                      +++.++|-|+ |.||+.+++.|++.+ +.             |.+.+++.++++++.+..+++..++.|++|.+++.+++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhh
Confidence            4556677775 889999999998753 23             88899999999988888778888999999999988877


Q ss_pred             HhcCCccEEEEccCC
Q psy14567         77 SKVGPVDVLINNAAV   91 (238)
Q Consensus        77 ~~~g~id~li~~ag~   91 (238)
                      ++   +|+||++...
T Consensus       647 ~~---~DaVIsalP~  658 (1042)
T PLN02819        647 SQ---VDVVISLLPA  658 (1042)
T ss_pred             cC---CCEEEECCCc
Confidence            74   8999999865

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.92  E-value=0.0048  Score=51.75  Aligned_cols=79  Identities=11%  Similarity=0.174  Sum_probs=54.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +....++|+||+|++|..++..+...|++|+.++++.++.+.+.+..+--.+  .|..+.++..+.+.+.  +++|+++.
T Consensus       150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~~~~i~~~~~~gvd~v~d  227 (338)
T cd08295         150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDA--FNYKEEPDLDAALKRYFPNGIDIYFD  227 (338)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCcee--EEcCCcccHHHHHHHhCCCCcEEEEE
Confidence            3456788999999999999998888999999999999888777663332122  2322222222222222  46899998


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      +.|
T Consensus       228 ~~g  230 (338)
T cd08295         228 NVG  230 (338)
T ss_pred             CCC
Confidence            876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>KOG1198|consensus

Probab=96.90  E-value=0.0037  Score=52.67  Aligned_cols=81  Identities=16%  Similarity=0.129  Sum_probs=56.9

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh--cCCccEE
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK--VGPVDVL   85 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~g~id~l   85 (238)
                      +.+..+.+++.||+||+|.+.++-....|+..+++.+++++.+-+++...   -...|..+++ +.+.+++  .+++|++
T Consensus       154 ~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGA---d~vvdy~~~~-~~e~~kk~~~~~~DvV  229 (347)
T KOG1198|consen  154 KLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGA---DEVVDYKDEN-VVELIKKYTGKGVDVV  229 (347)
T ss_pred             ccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCC---cEeecCCCHH-HHHHHHhhcCCCccEE
Confidence            34466688999999999999999988889655666666666655554432   2236777754 4444444  3679999


Q ss_pred             EEccCCC
Q psy14567         86 INNAAVA   92 (238)
Q Consensus        86 i~~ag~~   92 (238)
                      +.|.|..
T Consensus       230 lD~vg~~  236 (347)
T KOG1198|consen  230 LDCVGGS  236 (347)
T ss_pred             EECCCCC
Confidence            9999864

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.89  E-value=0.0042  Score=49.11  Aligned_cols=68  Identities=13%  Similarity=0.231  Sum_probs=55.6

Q ss_pred             CCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHH-HHhcCCccEEEEccCC
Q psy14567         21 KPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAA-VSKVGPVDVLINNAAV   91 (238)
Q Consensus        21 s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~-~~~~g~id~li~~ag~   91 (238)
                      .|-+|.++|+.|.++|++|+++.++++..++..+.-.....+.+|-++++.++++ ++   ..|++|...|-
T Consensus         8 ~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~---~aD~vva~t~~   76 (225)
T COG0569           8 AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGID---DADAVVAATGN   76 (225)
T ss_pred             CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCC---cCCEEEEeeCC
Confidence            4669999999999999999999999999888655444688899999999876665 23   46888777764

>PRK05086 malate dehydrogenase; Provisional

Probab=96.87  E-value=0.0037  Score=51.99  Aligned_cols=109  Identities=17%  Similarity=0.207  Sum_probs=58.9

Q ss_pred             CCCCCCCCchHHHHHHHHhh---CCCEEEEecCChHhH---HHHHhhCCCceEEEe-ecCCHHHHHHHHHhcCCccEEEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQ---HEAIIIALSKTQANL---DSLKQAFPNVQTVQV-DLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~---~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~-D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      ++|.||+|++|.+++..+..   .+..+++++|++...   -++.+ .+....+.. +-.   ++   .+.+...|++|.
T Consensus         3 I~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~-~~~~~~i~~~~~~---d~---~~~l~~~DiVIi   75 (312)
T PRK05086          3 VAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSH-IPTAVKIKGFSGE---DP---TPALEGADVVLI   75 (312)
T ss_pred             EEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhc-CCCCceEEEeCCC---CH---HHHcCCCCEEEE
Confidence            45679999999999998854   234788888875321   12211 111112222 111   21   222335899999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      ++|.....   ..+.    ...++.|....-.+.+.+    .+.+ ..+++.+.|
T Consensus        76 taG~~~~~---~~~R----~dll~~N~~i~~~ii~~i----~~~~-~~~ivivvs  118 (312)
T PRK05086         76 SAGVARKP---GMDR----SDLFNVNAGIVKNLVEKV----AKTC-PKACIGIIT  118 (312)
T ss_pred             cCCCCCCC---CCCH----HHHHHHHHHHHHHHHHHH----HHhC-CCeEEEEcc
Confidence            99986422   1222    333566766665555554    4444 334555443

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.87  E-value=0.0098  Score=41.58  Aligned_cols=69  Identities=17%  Similarity=0.161  Sum_probs=53.5

Q ss_pred             CCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         17 GDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        17 itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      |-|. |.+|+.+++.|.+.+..|++++++++..+++.+..  +.++.+|.++++.++++  .+.+.+.+|...+
T Consensus         3 I~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~--~~~i~gd~~~~~~l~~a--~i~~a~~vv~~~~   71 (116)
T PF02254_consen    3 IIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEG--VEVIYGDATDPEVLERA--GIEKADAVVILTD   71 (116)
T ss_dssp             EES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT--SEEEES-TTSHHHHHHT--TGGCESEEEEESS
T ss_pred             EEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcc--cccccccchhhhHHhhc--CccccCEEEEccC
Confidence            3344 57999999999997779999999999999888765  78999999999877665  2235677766654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.84  E-value=0.0066  Score=51.24  Aligned_cols=79  Identities=11%  Similarity=0.192  Sum_probs=53.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++|.|++|++|..++..+...|++|+.++++.++.+.+.+.++--.+  .|..+.++..+.+.+.  +.+|+++.
T Consensus       157 ~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~v--i~~~~~~~~~~~i~~~~~~gvD~v~d  234 (348)
T PLN03154        157 KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA--FNYKEEPDLDAALKRYFPEGIDIYFD  234 (348)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEE--EECCCcccHHHHHHHHCCCCcEEEEE
Confidence            3456788999999999999988888999999999998887776644432222  2332221222223222  35899998


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      +.|
T Consensus       235 ~vG  237 (348)
T PLN03154        235 NVG  237 (348)
T ss_pred             CCC
Confidence            887

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.82  E-value=0.0026  Score=55.97  Aligned_cols=71  Identities=15%  Similarity=0.240  Sum_probs=51.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.+.++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+..+. ..  .+.   +++.    .+...|++|++..
T Consensus       331 ~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~-~~--~~~---~~~~----~l~~~DiVInatP  399 (477)
T PRK09310        331 NNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQG-KA--FPL---ESLP----ELHRIDIIINCLP  399 (477)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ce--ech---hHhc----ccCCCCEEEEcCC
Confidence            4456788885 7999999999999999999999999888887665431 11  111   1211    2346899999986


Q ss_pred             CC
Q psy14567         91 VA   92 (238)
Q Consensus        91 ~~   92 (238)
                      ..
T Consensus       400 ~g  401 (477)
T PRK09310        400 PS  401 (477)
T ss_pred             CC
Confidence            54

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.78  E-value=0.0066  Score=50.81  Aligned_cols=76  Identities=17%  Similarity=0.227  Sum_probs=51.8

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--C-CccEEEEc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--G-PVDVLINN   88 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g-~id~li~~   88 (238)
                      ..+++|+||+||+|...+.-+...|++++++..++++.+.+.+...+. .  .|..+++ +.+.+.+.  | .+|+++..
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~-v--i~y~~~~-~~~~v~~~t~g~gvDvv~D~  218 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADH-V--INYREED-FVEQVRELTGGKGVDVVLDT  218 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCE-E--EcCCccc-HHHHHHHHcCCCCceEEEEC
Confidence            678899999999999999999899987777777777766555444322 2  3344433 33333322  2 59999988


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      .|.
T Consensus       219 vG~  221 (326)
T COG0604         219 VGG  221 (326)
T ss_pred             CCH
Confidence            874

>KOG4039|consensus

Probab=96.77  E-value=0.0078  Score=45.15  Aligned_cols=151  Identities=16%  Similarity=0.159  Sum_probs=91.9

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ....|.||||-.|..+.+++++.+.  +|+++.|++.- +.  +....+.-...|++..++   ....+..+|+.+++-|
T Consensus        19 ~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~-d~--at~k~v~q~~vDf~Kl~~---~a~~~qg~dV~FcaLg   92 (238)
T KOG4039|consen   19 MSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELP-DP--ATDKVVAQVEVDFSKLSQ---LATNEQGPDVLFCALG   92 (238)
T ss_pred             cceEEEeccccccHHHHHHHHhcccceeEEEEEeccCC-Cc--cccceeeeEEechHHHHH---HHhhhcCCceEEEeec
Confidence            3446679999999999999999885  89999888521 11  112234445667655544   5555557999999988


Q ss_pred             CCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         91 VARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        91 ~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ...-    ..+...+.+.            .+.+.+++    +.++ -..++.+||..+....  ...|--.|.-++.=+
T Consensus        93 TTRgkaGadgfykvDhDy------------vl~~A~~A----Ke~G-ck~fvLvSS~GAd~sS--rFlY~k~KGEvE~~v  153 (238)
T KOG4039|consen   93 TTRGKAGADGFYKVDHDY------------VLQLAQAA----KEKG-CKTFVLVSSAGADPSS--RFLYMKMKGEVERDV  153 (238)
T ss_pred             ccccccccCceEeechHH------------HHHHHHHH----HhCC-CeEEEEEeccCCCccc--ceeeeeccchhhhhh
Confidence            6532    2222222221            11222333    2222 3478999998876544  346777776666544


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGR  194 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~  194 (238)
                      ..    +.-  =++....||++..+.+.
T Consensus       154 ~e----L~F--~~~~i~RPG~ll~~R~e  175 (238)
T KOG4039|consen  154 IE----LDF--KHIIILRPGPLLGERTE  175 (238)
T ss_pred             hh----ccc--cEEEEecCcceeccccc
Confidence            32    221  16778899999776653

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=96.74  E-value=0.0063  Score=43.39  Aligned_cols=66  Identities=20%  Similarity=0.218  Sum_probs=47.2

Q ss_pred             chHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEccCC
Q psy14567         23 GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNAAV   91 (238)
Q Consensus        23 gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~ag~   91 (238)
                      |||...+..+...|++|+++++++++.+.+++..  ... ..|.++.+-.+++.+..  .++|++|.++|.
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~G--a~~-~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~   68 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELG--ADH-VIDYSDDDFVEQIRELTGGRGVDVVIDCVGS   68 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTT--ESE-EEETTTSSHHHHHHHHTTTSSEEEEEESSSS
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhc--ccc-cccccccccccccccccccccceEEEEecCc
Confidence            6899999999999999999999999988777644  222 24554443333333333  369999999983

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.72  E-value=0.0067  Score=50.55  Aligned_cols=72  Identities=17%  Similarity=0.170  Sum_probs=54.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ...++|+|+. |+|...++.....|++|++++|++++.+..++...+.   ..|-++++..+.+-+.   .|++|.+++
T Consensus       167 G~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~---~i~~~~~~~~~~~~~~---~d~ii~tv~  238 (339)
T COG1064         167 GKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADH---VINSSDSDALEAVKEI---ADAIIDTVG  238 (339)
T ss_pred             CCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcE---EEEcCCchhhHHhHhh---CcEEEECCC
Confidence            4466778887 9999999888889999999999999998877765443   2343455555554442   899999987

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.71  E-value=0.0059  Score=49.48  Aligned_cols=114  Identities=13%  Similarity=0.145  Sum_probs=63.2

Q ss_pred             CCCCCCCCchHHHHHHHHhhCC----CEEEEecCChHhHHHHHhhCCCceE--EEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHE----AIIIALSKTQANLDSLKQAFPNVQT--VQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~--~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      +.|.||+|.+|..++..|+..|    .+++++++++++++.......+...  ....++.-++..+.++   .-|++|..
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~---~aDiVv~t   77 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFK---DADVVIIT   77 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhC---CCCEEEEC
Confidence            3567988889999999999988    6899999988765544433321110  1112211112222333   46999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      +|.....   .++..+    .+..|    .-+.+...+.+.+..+.+.++++|-
T Consensus        78 ~~~~~~~---g~~r~~----~~~~n----~~i~~~i~~~i~~~~p~a~~i~~tN  120 (263)
T cd00650          78 AGVGRKP---GMGRLD----LLKRN----VPIVKEIGDNIEKYSPDAWIIVVSN  120 (263)
T ss_pred             CCCCCCc---CCCHHH----HHHHH----HHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9876432   122211    12223    3334444444444443556666643

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.70  E-value=0.0042  Score=51.09  Aligned_cols=77  Identities=17%  Similarity=0.111  Sum_probs=63.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +...++|-||+|-.|.-+|++|+.+|.+-.+.+||..+++.+.+.++ +...+++++  +..+++..+   ..++|+||+
T Consensus         5 ~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~--p~~~~~~~~---~~~VVlncv   79 (382)
T COG3268           5 REYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGV--PAALEAMAS---RTQVVLNCV   79 (382)
T ss_pred             cceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCC--HHHHHHHHh---cceEEEecc
Confidence            44567788999999999999999999999999999999999887764 455555555  666666666   469999999


Q ss_pred             CCC
Q psy14567         90 AVA   92 (238)
Q Consensus        90 g~~   92 (238)
                      |-+
T Consensus        80 GPy   82 (382)
T COG3268          80 GPY   82 (382)
T ss_pred             ccc
Confidence            965

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.70  E-value=0.005  Score=50.56  Aligned_cols=80  Identities=16%  Similarity=0.092  Sum_probs=48.5

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCCh---HhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQ---ANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~---~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      .+.++|-|+ ||-+++++..|+..|+ +|.++.|+.   ++.+++.+..+........+.+.++...+.+...+.|++||
T Consensus       124 ~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivIN  202 (288)
T PRK12749        124 GKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTN  202 (288)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEEE
Confidence            344555564 6789999999999997 899999994   47777766553210001112222221112223346899999


Q ss_pred             ccCCC
Q psy14567         88 NAAVA   92 (238)
Q Consensus        88 ~ag~~   92 (238)
                      +....
T Consensus       203 aTp~G  207 (288)
T PRK12749        203 GTKVG  207 (288)
T ss_pred             CCCCC
Confidence            88554

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.62  E-value=0.0076  Score=48.29  Aligned_cols=78  Identities=14%  Similarity=0.067  Sum_probs=52.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHH-HhcCCccEEEEc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAV-SKVGPVDVLINN   88 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~-~~~g~id~li~~   88 (238)
                      .....++|+|+++ +|.++++.+...|.+|+++++++++.+.+.... ....  .|..+.+....+. ..-+++|+++++
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g-~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~  208 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELG-ADHV--IDYKEEDLEEELRLTGGGGADVVIDA  208 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhC-Ccee--ccCCcCCHHHHHHHhcCCCCCEEEEC
Confidence            3456788999988 999999999999999999999988777665432 1122  2333322222222 122469999998


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      +|.
T Consensus       209 ~~~  211 (271)
T cd05188         209 VGG  211 (271)
T ss_pred             CCC
Confidence            874

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.61  E-value=0.0021  Score=56.09  Aligned_cols=73  Identities=8%  Similarity=0.003  Sum_probs=47.7

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh----HHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN----LDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      .++++|||+++ +|.++|+.|++.|++|++.+++...    .+.+.+.  ++.+...+  +...+   .+  ..+|.+|+
T Consensus         5 ~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~--g~~~~~~~--~~~~~---~~--~~~d~vV~   74 (447)
T PRK02472          5 NKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE--GIKVICGS--HPLEL---LD--EDFDLMVK   74 (447)
T ss_pred             CCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc--CCEEEeCC--CCHHH---hc--CcCCEEEE
Confidence            45678899876 9999999999999999999876532    2233322  23333222  11221   12  13899999


Q ss_pred             ccCCCCC
Q psy14567         88 NAAVARF   94 (238)
Q Consensus        88 ~ag~~~~   94 (238)
                      ++|+...
T Consensus        75 s~gi~~~   81 (447)
T PRK02472         75 NPGIPYT   81 (447)
T ss_pred             CCCCCCC
Confidence            9998643

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.59  E-value=0.0073  Score=49.59  Aligned_cols=69  Identities=14%  Similarity=0.117  Sum_probs=48.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.++++|.|. |++|+++++.|...|++|.+.+|+.++.+...+..  ..  ..   ..+++.+.++   ..|++|++..
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g--~~--~~---~~~~l~~~l~---~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMG--LI--PF---PLNKLEEKVA---EIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCC--Ce--ee---cHHHHHHHhc---cCCEEEECCC
Confidence            3456677776 67999999999999999999999988766554321  11  11   2334444444   5799999873

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.59  E-value=0.0033  Score=50.67  Aligned_cols=74  Identities=16%  Similarity=0.073  Sum_probs=56.1

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      .++|+|||+- |+.+++.|.+.|+.|++..++....+.+.+. + ...+..+.-+.+++.+++++. ++|++|+.+.-
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~-g-~~~v~~g~l~~~~l~~~l~~~-~i~~VIDAtHP   75 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIH-Q-ALTVHTGALDPQELREFLKRH-SIDILVDATHP   75 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccccc-C-CceEEECCCCHHHHHHHHHhc-CCCEEEEcCCH
Confidence            3677899886 9999999999999999999988765555432 1 223446667778888888765 58999998853

This enzyme was found to be a monomer by gel filtration.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.53  E-value=0.0089  Score=46.38  Aligned_cols=45  Identities=16%  Similarity=0.142  Sum_probs=37.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF   56 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (238)
                      +.++++|.|. |.+|+++++.|.+.|++|++.+++.++.+++.+..
T Consensus        27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~   71 (200)
T cd01075          27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELF   71 (200)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            4456777776 48999999999999999999999998888877654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.50  E-value=0.011  Score=48.54  Aligned_cols=77  Identities=14%  Similarity=0.137  Sum_probs=49.7

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCC-ceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPN-VQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      .+.++|-|+ ||-|++++..|++.|+ +|.++.|+.++.+++.+.+.. .........+..+..+..   ...|++||+.
T Consensus       127 ~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~---~~~divINaT  202 (283)
T PRK14027        127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVI---AAADGVVNAT  202 (283)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHH---hhcCEEEEcC
Confidence            345566665 8899999999999998 799999999998888765421 100001111222222222   2479999998


Q ss_pred             CCC
Q psy14567         90 AVA   92 (238)
Q Consensus        90 g~~   92 (238)
                      ...
T Consensus       203 p~G  205 (283)
T PRK14027        203 PMG  205 (283)
T ss_pred             CCC
Confidence            654

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.50  E-value=0.024  Score=47.10  Aligned_cols=114  Identities=14%  Similarity=0.107  Sum_probs=65.5

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHh--HHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.|+|++|.+|.++|..|+..+.  .++++++++..  ..++........+..+.- + ++   ..+.+..-|++|.+||
T Consensus         2 V~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~DL~~~~~~~~i~~~~~-~-~~---~~~~~~daDivvitaG   76 (312)
T TIGR01772         2 VAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAADLSHIPTAASVKGFSG-E-EG---LENALKGADVVVIPAG   76 (312)
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEchhhcCCcCceEEEecC-C-Cc---hHHHcCCCCEEEEeCC
Confidence            45779999999999999988875  79999987721  111221111111111010 1 11   1223345799999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccc
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIA  144 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  144 (238)
                      .... +  .++..    ..++.|..    +++...+.+.+..+.+.++.+|.-.
T Consensus        77 ~~~~-~--g~~R~----dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPv  119 (312)
T TIGR01772        77 VPRK-P--GMTRD----DLFNVNAG----IVKDLVAAVAESCPKAMILVITNPV  119 (312)
T ss_pred             CCCC-C--CccHH----HHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCch
Confidence            7532 1  23332    23556655    5566666666655467777776544

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=96.48  E-value=0.015  Score=50.52  Aligned_cols=114  Identities=10%  Similarity=0.121  Sum_probs=69.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhC-------CC--EEEEecCChHhHHHHHhhCCCce-EEEeec----CCHHHHHHHH
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQH-------EA--IIIALSKTQANLDSLKQAFPNVQ-TVQVDL----QDWARTRAAV   76 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~-------G~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~----~~~~~v~~~~   76 (238)
                      +...+.|+|++|.+|.+++..|+..       |.  ++++++++++.++....++.+.. .+..++    .+.+      
T Consensus        99 ~~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye------  172 (444)
T PLN00112         99 KLINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYE------  172 (444)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHH------
Confidence            4556788999999999999999887       64  79999999887665433332211 000111    1222      


Q ss_pred             HhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCceEEEEcc
Q psy14567         77 SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID-HKIQGSIVNVSS  142 (238)
Q Consensus        77 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~g~iv~isS  142 (238)
                       .+..-|++|..||.... +  .++..+    .++.|..    +++...+.+.+ ..+.+.|+.+|.
T Consensus       173 -~~kdaDiVVitAG~prk-p--G~tR~d----Ll~~N~~----I~k~i~~~I~~~a~p~~ivIVVsN  227 (444)
T PLN00112        173 -VFQDAEWALLIGAKPRG-P--GMERAD----LLDINGQ----IFAEQGKALNEVASRNVKVIVVGN  227 (444)
T ss_pred             -HhCcCCEEEECCCCCCC-C--CCCHHH----HHHHHHH----HHHHHHHHHHHhcCCCeEEEEcCC
Confidence             22346999999997532 1  333333    3445544    44566666666 344677777764

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.46  E-value=0.011  Score=49.47  Aligned_cols=118  Identities=12%  Similarity=0.122  Sum_probs=64.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-------EEEEecCCh--HhHHHHHhhCCCce-EEEeecCCHHHHHHHHHhcC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-------IIIALSKTQ--ANLDSLKQAFPNVQ-TVQVDLQDWARTRAAVSKVG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~g   80 (238)
                      +..-+.|+|++|++|.+++..|...|.       .++++++++  +.++.....+.+.. ...-+..-..   .-.+.+.
T Consensus         2 ~p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~---~~~~~~~   78 (323)
T TIGR01759         2 KPVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATT---DPEEAFK   78 (323)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEec---ChHHHhC
Confidence            344566789999999999999988774       689999865  22332222221111 0000110000   1112223


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CceEEEEcc
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI-QGSIVNVSS  142 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~g~iv~isS  142 (238)
                      .-|++|.+||.... +  .++..+    .++.|..    +++.+.+.+.+..+ .+.++.+|-
T Consensus        79 daDvVVitAG~~~k-~--g~tR~d----ll~~Na~----i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        79 DVDAALLVGAFPRK-P--GMERAD----LLSKNGK----IFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             CCCEEEEeCCCCCC-C--CCcHHH----HHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence            46999999997532 1  233333    3445544    44556666666543 566777653

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.44  E-value=0.02  Score=47.36  Aligned_cols=108  Identities=10%  Similarity=0.064  Sum_probs=64.0

Q ss_pred             CCCCCCchHHHHHHHHhhCC--CEEEEecCChHhHHHHHhhCCCceEE----EeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         17 GDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANLDSLKQAFPNVQTV----QVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        17 itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~----~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      |.|+ |++|.+++..|+..|  .++++++++++.++.....+.+....    ....++.      .+.+..-|++|.++|
T Consensus         3 iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~------~~~l~~aDiVIitag   75 (300)
T cd00300           3 IIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD------YADAADADIVVITAG   75 (300)
T ss_pred             EECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC------HHHhCCCCEEEEcCC
Confidence            4454 679999999999988  58999999987766554433222111    1111111      122234699999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      ....   ..++..+    .+..|    .-+++.+.+.+.+..+.+.++++|.
T Consensus        76 ~p~~---~~~~R~~----l~~~n----~~i~~~~~~~i~~~~p~~~viv~sN  116 (300)
T cd00300          76 APRK---PGETRLD----LINRN----APILRSVITNLKKYGPDAIILVVSN  116 (300)
T ss_pred             CCCC---CCCCHHH----HHHHH----HHHHHHHHHHHHHhCCCeEEEEccC
Confidence            7532   1233332    12333    4455666666666555677777764

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.43  E-value=0.0097  Score=50.05  Aligned_cols=76  Identities=16%  Similarity=0.047  Sum_probs=52.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      ...+++|+|+ |++|...+..+...|+ +|+++++++++.+.+.+.... .+  .|..+. ++.+..+.-+.+|++|.++
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~-~v--i~~~~~-~~~~~~~~~g~~D~vid~~  243 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGAD-KL--VNPQND-DLDHYKAEKGYFDVSFEVS  243 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCc-EE--ecCCcc-cHHHHhccCCCCCEEEECC
Confidence            3556778886 8999999988888898 688899999888766654322 22  344332 2334443335689999998


Q ss_pred             CC
Q psy14567         90 AV   91 (238)
Q Consensus        90 g~   91 (238)
                      |.
T Consensus       244 G~  245 (343)
T PRK09880        244 GH  245 (343)
T ss_pred             CC
Confidence            83

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.40  E-value=0.012  Score=48.95  Aligned_cols=78  Identities=10%  Similarity=0.075  Sum_probs=53.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~~a   89 (238)
                      ...+++|.|+++++|.+++..+...|++|+.++++.++.+.+.+..+--.+  .|..+.+..+.+.+.. +++|+++.+.
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~v~~~~~~~~d~vi~~~  222 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAA--INYKTPDLAEALKEAAPDGIDVYFDNV  222 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceE--EecCChhHHHHHHHhccCCceEEEEcc
Confidence            346778999999999999999999999999999998887777653432122  2333333222222221 4699999887


Q ss_pred             C
Q psy14567         90 A   90 (238)
Q Consensus        90 g   90 (238)
                      |
T Consensus       223 g  223 (329)
T cd05288         223 G  223 (329)
T ss_pred             h
Confidence            6

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.40  E-value=0.02  Score=47.24  Aligned_cols=78  Identities=13%  Similarity=0.118  Sum_probs=53.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      +..+++|+|+++++|.+++..+...|++|+.++++.++.+.+.. .+.-.++  |....+....+.+..  ..+|.++++
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~  220 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLA-LGAAHVI--VTDEEDLVAEVLRITGGKGVDVVFDP  220 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCCEEE--ecCCccHHHHHHHHhCCCCceEEEEC
Confidence            34577899999999999999999999999999999888776643 3222222  322222222233222  259999998


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      +|.
T Consensus       221 ~~~  223 (328)
T cd08268         221 VGG  223 (328)
T ss_pred             Cch
Confidence            873

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.38  E-value=0.012  Score=51.01  Aligned_cols=71  Identities=13%  Similarity=0.168  Sum_probs=48.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      ...+++|.|+ |++|..+++.|...|+ +|++++|+.++.+++.+.++.      ++.+.++..+.+.   ..|++|.+.
T Consensus       181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~------~~~~~~~~~~~l~---~aDvVI~aT  250 (423)
T PRK00045        181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGG------EAIPLDELPEALA---EADIVISST  250 (423)
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC------cEeeHHHHHHHhc---cCCEEEECC
Confidence            4455666665 8999999999999997 899999999988877776542      1112233333333   457777766


Q ss_pred             CC
Q psy14567         90 AV   91 (238)
Q Consensus        90 g~   91 (238)
                      |.
T Consensus       251 ~s  252 (423)
T PRK00045        251 GA  252 (423)
T ss_pred             CC
Confidence            53

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.37  E-value=0.0097  Score=52.04  Aligned_cols=72  Identities=19%  Similarity=0.127  Sum_probs=55.2

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ++|.|+ |.+|.++++.|.+.|..|++++++++..+.+.+. .++.++.+|.++++.++++  .+.+.|.+|.+.+
T Consensus         3 viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-~~~~~~~gd~~~~~~l~~~--~~~~a~~vi~~~~   74 (453)
T PRK09496          3 IIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-LDVRTVVGNGSSPDVLREA--GAEDADLLIAVTD   74 (453)
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-cCEEEEEeCCCCHHHHHHc--CCCcCCEEEEecC
Confidence            445576 8999999999999999999999999988877652 2577888999987766554  1235677776654

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.37  E-value=0.05  Score=44.14  Aligned_cols=140  Identities=13%  Similarity=0.175  Sum_probs=73.1

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHH-----------------------HHHhhCCCceE
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLD-----------------------SLKQAFPNVQT   61 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----------------------~~~~~~~~~~~   61 (238)
                      +|...+..+++.    ||+|.++|+.|++.|. ++.+++...-...                       .+.+..+.+.+
T Consensus        27 kL~~s~VlVvG~----GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V  102 (268)
T PRK15116         27 LFADAHICVVGI----GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRV  102 (268)
T ss_pred             HhcCCCEEEECc----CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEE
Confidence            455555444433    6899999999999995 8888875432211                       12222233333


Q ss_pred             EEee-cCCHHHHHHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEE
Q psy14567         62 VQVD-LQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNV  140 (238)
Q Consensus        62 ~~~D-~~~~~~v~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~i  140 (238)
                      ...+ .-+++...+++.  .+.|++|.+....                      ..-..+.+.+.    +.+  -.++..
T Consensus       103 ~~i~~~i~~e~~~~ll~--~~~D~VIdaiD~~----------------------~~k~~L~~~c~----~~~--ip~I~~  152 (268)
T PRK15116        103 TVVDDFITPDNVAEYMS--AGFSYVIDAIDSV----------------------RPKAALIAYCR----RNK--IPLVTT  152 (268)
T ss_pred             EEEecccChhhHHHHhc--CCCCEEEEcCCCH----------------------HHHHHHHHHHH----HcC--CCEEEE
Confidence            2221 112333333331  2356665555421                      11112223332    221  245555


Q ss_pred             ccccccccCCCCchhhHHHHHHHHHHHHHHHHhCC-CCeE
Q psy14567        141 SSIAGKTALEGHTIYSASKAALDSITRTMALELGP-YNIR  179 (238)
Q Consensus       141 sS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~~~-~~i~  179 (238)
                      ++..+..-+.....-..+|.....|++.++.++++ +||+
T Consensus       153 gGag~k~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        153 GGAGGQIDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             CCcccCCCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            55554443333334456667778899999999987 5764

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.37  E-value=0.021  Score=47.02  Aligned_cols=77  Identities=12%  Similarity=0.126  Sum_probs=53.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ...+++|+|+++++|.+++..+...|++|+++.++++..+.+ ...+ +.. ..+..+.+....+.+..  +++|.++++
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g-~~~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~  215 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALG-ADI-AINYREEDFVEVVKAETGGKGVDVILDI  215 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcC-CcE-EEecCchhHHHHHHHHcCCCCeEEEEEC
Confidence            345778999999999999999999999999999988877655 3332 211 23333333333333322  259999998


Q ss_pred             cC
Q psy14567         89 AA   90 (238)
Q Consensus        89 ag   90 (238)
                      +|
T Consensus       216 ~~  217 (325)
T TIGR02824       216 VG  217 (325)
T ss_pred             Cc
Confidence            87

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.27  E-value=0.017  Score=50.14  Aligned_cols=72  Identities=11%  Similarity=0.173  Sum_probs=49.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      .+...++|.|+ |.+|..+++.|...| .+|++++|+.++.+++.+.++. ..+  +   .+++.+.+.   ..|++|.+
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~-~~i--~---~~~l~~~l~---~aDvVi~a  247 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGG-EAV--K---FEDLEEYLA---EADIVISS  247 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC-eEe--e---HHHHHHHHh---hCCEEEEC
Confidence            34456677776 899999999999999 6899999999888777766542 111  1   233444443   35777777


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      .|.
T Consensus       248 T~s  250 (417)
T TIGR01035       248 TGA  250 (417)
T ss_pred             CCC
Confidence            653

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.27  E-value=0.012  Score=49.01  Aligned_cols=108  Identities=9%  Similarity=0.090  Sum_probs=64.0

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhCCCc------eEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNV------QTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~------~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      +.|.|+ |.+|.++|..|+..|.  .+++++++++.++.....+.+.      .-+.. -.|.++       +..-|++|
T Consensus         6 i~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~-~~dy~~-------~~~adivv   76 (312)
T cd05293           6 VTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA-DKDYSV-------TANSKVVI   76 (312)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE-CCCHHH-------hCCCCEEE
Confidence            355685 9999999999988775  7999999876544332222111      11111 122222       23469999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      .+||.... +  .++..+    .++.|    .-+++.+.+.+.+..+++.++.+|.
T Consensus        77 itaG~~~k-~--g~~R~d----ll~~N----~~i~~~~~~~i~~~~p~~~vivvsN  121 (312)
T cd05293          77 VTAGARQN-E--GESRLD----LVQRN----VDIFKGIIPKLVKYSPNAILLVVSN  121 (312)
T ss_pred             ECCCCCCC-C--CCCHHH----HHHHH----HHHHHHHHHHHHHhCCCcEEEEccC
Confidence            99997642 1  233333    23334    4445666666666655677777774

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.26  E-value=0.013  Score=51.34  Aligned_cols=76  Identities=13%  Similarity=0.105  Sum_probs=60.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      .+.++|.|+ |.+|+.+++.|.+.|..|++++++++..+.+.+...+..++..|.++++.++++-  +.+.|.+|.+.+
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~--~~~a~~vi~~~~  306 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEG--IDEADAFIALTN  306 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcC--CccCCEEEECCC
Confidence            345566666 8899999999999999999999999999888887777888999999987765542  235677765543

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.24  E-value=0.016  Score=48.17  Aligned_cols=72  Identities=11%  Similarity=0.085  Sum_probs=51.9

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ...++|.|+ |.+|..+++.|...|. +|++++|+.++.+++.++++.      +..+.+++.+.+.   ..|++|.+.+
T Consensus       178 ~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~------~~~~~~~~~~~l~---~aDvVi~at~  247 (311)
T cd05213         178 GKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG------NAVPLDELLELLN---EADVVISATG  247 (311)
T ss_pred             CCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC------eEEeHHHHHHHHh---cCCEEEECCC
Confidence            344555665 8999999999998774 799999999988888877653      2222344444444   4799999998


Q ss_pred             CCC
Q psy14567         91 VAR   93 (238)
Q Consensus        91 ~~~   93 (238)
                      ...
T Consensus       248 ~~~  250 (311)
T cd05213         248 APH  250 (311)
T ss_pred             CCc
Confidence            653

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.22  E-value=0.074  Score=42.24  Aligned_cols=36  Identities=19%  Similarity=0.261  Sum_probs=27.4

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCC
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKT   45 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~   45 (238)
                      +|+..+..+++.    ||+|.++++.|++.|. ++.+++..
T Consensus         8 ~L~~~~VlVvG~----GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           8 KLRNAHVAVVGL----GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HHhCCCEEEECC----CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            455555555444    6899999999999998 88888754

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.05  E-value=0.1  Score=46.26  Aligned_cols=79  Identities=13%  Similarity=0.092  Sum_probs=53.3

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCH-------------H---HHHHH
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDW-------------A---RTRAA   75 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-------------~---~v~~~   75 (238)
                      ...++|.| .|.+|+..+..+...|++|++++++.++++..++..  .+++..|..+.             +   ...+.
T Consensus       165 g~kVlViG-aG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslG--A~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~  241 (509)
T PRK09424        165 PAKVLVIG-AGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMG--AEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL  241 (509)
T ss_pred             CCEEEEEC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC--CeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence            33445554 467999999999999999999999999998887653  33333333221             1   11222


Q ss_pred             H-HhcCCccEEEEccCCCC
Q psy14567         76 V-SKVGPVDVLINNAAVAR   93 (238)
Q Consensus        76 ~-~~~g~id~li~~ag~~~   93 (238)
                      + +..+..|++|.++|...
T Consensus       242 ~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        242 FAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             HHhccCCCCEEEECCCCCc
Confidence            2 23356999999999753

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.01  E-value=0.11  Score=43.48  Aligned_cols=115  Identities=10%  Similarity=0.085  Sum_probs=63.9

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHH----HHhhC--CCceEEEeec-CCHHHHHHHHHhcCCccEEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDS----LKQAF--PNVQTVQVDL-QDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~----~~~~~--~~~~~~~~D~-~~~~~v~~~~~~~g~id~li   86 (238)
                      +.|.| +|.+|..++..++..|. .|++++++++.++.    +....  .... ...-. +|.++       +..-|++|
T Consensus         9 I~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~-~~I~~~~d~~~-------l~~aDiVI   79 (321)
T PTZ00082          9 ISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSN-SKVIGTNNYED-------IAGSDVVI   79 (321)
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCC-eEEEECCCHHH-------hCCCCEEE
Confidence            44557 47899999999999995 89999998874321    11111  0111 11111 23222       22469999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccc
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIA  144 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  144 (238)
                      .++|........+.+...  .+.+..|+    -+.+...+.+.+..+++.++++|...
T Consensus        80 ~tag~~~~~~~~~~~~~r--~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         80 VTAGLTKRPGKSDKEWNR--DDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             ECCCCCCCCCCCcCCCCH--HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence            999986532222222121  22344454    35566666666655456677776533

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.00  E-value=0.027  Score=48.26  Aligned_cols=71  Identities=13%  Similarity=0.158  Sum_probs=48.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.+.+++.|+ |-+|.-+|++|++.|. +|+++.|+.++.+++..+++      .++...+++.+.+.   ..|++|.+.
T Consensus       177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~------~~~~~l~el~~~l~---~~DvVissT  246 (414)
T COG0373         177 KDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG------AEAVALEELLEALA---EADVVISST  246 (414)
T ss_pred             ccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC------CeeecHHHHHHhhh---hCCEEEEec
Confidence            3344444443 5699999999999995 89999999999999998876      33333344444444   346666665


Q ss_pred             CC
Q psy14567         90 AV   91 (238)
Q Consensus        90 g~   91 (238)
                      |.
T Consensus       247 sa  248 (414)
T COG0373         247 SA  248 (414)
T ss_pred             CC
Confidence            43

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=96.00  E-value=0.028  Score=46.81  Aligned_cols=75  Identities=11%  Similarity=0.115  Sum_probs=50.2

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEccC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNAA   90 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~ag   90 (238)
                      .+++++||+|++|..++......|++|+++++++++.+.+.+. +.-.++  |..+.+..+.+.+..  ..+|+++.+.|
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~-g~~~~i--~~~~~~~~~~v~~~~~~~~~d~vid~~g  221 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKI-GAEYVL--NSSDPDFLEDLKELIAKLNATIFFDAVG  221 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc-CCcEEE--ECCCccHHHHHHHHhCCCCCcEEEECCC
Confidence            4555569999999999988778899999999998887777653 322222  333322222222222  25899999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.00  E-value=0.025  Score=46.85  Aligned_cols=78  Identities=12%  Similarity=0.139  Sum_probs=53.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ...+++|.|+++++|.+++..+...|++|+.+.++.+..+.+.+. + +..+ .+..+.+..+.+.+..  .++|+++.+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~-g-~~~~-~~~~~~~~~~~i~~~~~~~~~d~v~d~  215 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRAL-G-IGPV-VSTEQPGWQDKVREAAGGAPISVALDS  215 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhc-C-CCEE-EcCCCchHHHHHHHHhCCCCCcEEEEC
Confidence            456778899999999999999999999999999998887777653 2 2221 2333322222222222  258999988


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      .|.
T Consensus       216 ~g~  218 (324)
T cd08292         216 VGG  218 (324)
T ss_pred             CCC
Confidence            773

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PLN00203 glutamyl-tRNA reductase

Probab=95.95  E-value=0.021  Score=50.70  Aligned_cols=73  Identities=15%  Similarity=0.298  Sum_probs=50.6

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      .+.++|.|+ |++|..+++.|...|+ +|+++.|+.++.+.+.+.++.......++   ++..+.+.   ..|+||.+.+
T Consensus       266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~---~dl~~al~---~aDVVIsAT~  338 (519)
T PLN00203        266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPL---DEMLACAA---EADVVFTSTS  338 (519)
T ss_pred             CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecH---hhHHHHHh---cCCEEEEccC
Confidence            445566676 8999999999999997 79999999999988887764332222222   33333443   4577777765


Q ss_pred             C
Q psy14567         91 V   91 (238)
Q Consensus        91 ~   91 (238)
                      .
T Consensus       339 s  339 (519)
T PLN00203        339 S  339 (519)
T ss_pred             C
Confidence            4

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=95.95  E-value=0.032  Score=46.67  Aligned_cols=76  Identities=12%  Similarity=-0.017  Sum_probs=51.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCE-EEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAI-IIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      ...+++|+|+ |++|..++..+...|++ |+++++++++.+.+.+...  . ...|..+.+ .+++.+..  .++|++|.
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga--~-~~i~~~~~~-~~~~~~~~~~~~~d~vid  237 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGA--D-FVINSGQDD-VQEIRELTSGAGADVAIE  237 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC--C-EEEcCCcch-HHHHHHHhCCCCCCEEEE
Confidence            3556777875 89999999999889998 9999999888776654332  1 123444433 33333222  25899999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      +.|.
T Consensus       238 ~~g~  241 (339)
T cd08239         238 CSGN  241 (339)
T ss_pred             CCCC
Confidence            8874

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.94  E-value=0.016  Score=47.37  Aligned_cols=73  Identities=21%  Similarity=0.211  Sum_probs=51.4

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceE--EEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQT--VQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.++|-| +||-+++++..|++.|+ +|+++.|+.++.+++.+.++....  ...+..+.+...       ..|++||+.
T Consensus       127 ~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~-------~~dliINaT  198 (283)
T COG0169         127 KRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE-------EADLLINAT  198 (283)
T ss_pred             CEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-------ccCEEEECC
Confidence            4455554 57899999999999996 899999999999999887764321  122222222211       369999999


Q ss_pred             CCCC
Q psy14567         90 AVAR   93 (238)
Q Consensus        90 g~~~   93 (238)
                      ...-
T Consensus       199 p~Gm  202 (283)
T COG0169         199 PVGM  202 (283)
T ss_pred             CCCC
Confidence            7653

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=95.94  E-value=0.026  Score=46.62  Aligned_cols=67  Identities=12%  Similarity=0.107  Sum_probs=46.8

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      .+.++|.|. |++|+.++..|...|++|.+++|+.++.+.....  ....+     ..+++.+.++   ..|++|+++
T Consensus       152 g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~--G~~~~-----~~~~l~~~l~---~aDiVI~t~  218 (296)
T PRK08306        152 GSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEM--GLSPF-----HLSELAEEVG---KIDIIFNTI  218 (296)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc--CCeee-----cHHHHHHHhC---CCCEEEECC
Confidence            455666675 6799999999999999999999998776655432  22222     2233444443   579999986

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.93  E-value=0.025  Score=47.05  Aligned_cols=76  Identities=14%  Similarity=0.120  Sum_probs=50.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ....++|.|+++++|.+++..+...|++|+.++++.++.+.+.+ .+--.+  .|..+.+ ..+.+.+.  +.+|.++++
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v--~~~~~~~-~~~~~~~~~~~~vd~v~~~  214 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LGCDRP--INYKTED-LGEVLKKEYPKGVDVVYES  214 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHH-cCCceE--EeCCCcc-HHHHHHHhcCCCCeEEEEC
Confidence            34567889999999999999888899999999998888777744 322122  2222222 22222211  358999887


Q ss_pred             cC
Q psy14567         89 AA   90 (238)
Q Consensus        89 ag   90 (238)
                      .|
T Consensus       215 ~g  216 (329)
T cd08250         215 VG  216 (329)
T ss_pred             Cc
Confidence            76

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.91  E-value=0.009  Score=46.19  Aligned_cols=35  Identities=14%  Similarity=0.069  Sum_probs=28.4

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN   48 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~   48 (238)
                      ++++| ||+|.||.+++++|+..|++|++.+|+.++
T Consensus         2 ~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~   36 (211)
T COG2085           2 MIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPK   36 (211)
T ss_pred             cEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChh
Confidence            34455 788999999999999999999988665543

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.91  E-value=0.049  Score=45.20  Aligned_cols=114  Identities=13%  Similarity=0.088  Sum_probs=63.7

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHh--HHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.|+|++|.+|.++|..|+..|.  .+++++++...  ..++.+.........+. .+ ++   ..+.+..-|++|.+||
T Consensus         3 I~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alDL~~~~~~~~i~~~~-~~-~~---~y~~~~daDivvitaG   77 (310)
T cd01337           3 VAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAADLSHINTPAKVTGYL-GP-EE---LKKALKGADVVVIPAG   77 (310)
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehHhHhCCCcceEEEec-CC-Cc---hHHhcCCCCEEEEeCC
Confidence            45679999999999999998884  79999987211  11222221111121110 11 11   1233335799999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccc
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIA  144 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  144 (238)
                      .... +  .++..    ..++.|..-.-    ...+.+.+..+.+.++.+|.-.
T Consensus        78 ~~~k-~--g~tR~----dll~~N~~i~~----~i~~~i~~~~p~a~vivvtNPv  120 (310)
T cd01337          78 VPRK-P--GMTRD----DLFNINAGIVR----DLATAVAKACPKALILIISNPV  120 (310)
T ss_pred             CCCC-C--CCCHH----HHHHHHHHHHH----HHHHHHHHhCCCeEEEEccCch
Confidence            7532 1  23332    23456655554    4444444444467777776544

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=95.90  E-value=0.018  Score=47.80  Aligned_cols=112  Identities=16%  Similarity=0.188  Sum_probs=62.3

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC--EEEEecCCh--HhHHHHHhhCCC------ceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQ--ANLDSLKQAFPN------VQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~--~~~~~~~~~~~~------~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      +.|.|++|.+|.+++..|+..|.  .|++++|++  +.++.......+      .. .....++.  .+    .+..-|+
T Consensus         3 I~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~d--~~----~l~~aDi   75 (309)
T cd05294           3 VSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISSD--LS----DVAGSDI   75 (309)
T ss_pred             EEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECCC--HH----HhCCCCE
Confidence            46779999999999999999886  599999954  333222111100      11 11222211  11    1335799


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccc
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIA  144 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  144 (238)
                      +|.++|....   .+.+..+    .++.|..-.    +.+.+.+.+..+.+.++.+++..
T Consensus        76 Viitag~p~~---~~~~r~d----l~~~n~~i~----~~~~~~i~~~~~~~~viv~~npv  124 (309)
T cd05294          76 VIITAGVPRK---EGMSRLD----LAKKNAKIV----KKYAKQIAEFAPDTKILVVTNPV  124 (309)
T ss_pred             EEEecCCCCC---CCCCHHH----HHHHHHHHH----HHHHHHHHHHCCCeEEEEeCCch
Confidence            9999997532   1223222    234454444    44444444443357788887643

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.89  E-value=0.052  Score=40.58  Aligned_cols=57  Identities=12%  Similarity=0.167  Sum_probs=44.3

Q ss_pred             CchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-----------CceEEEeecCCHHHHHHHHHh
Q psy14567         22 PGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----------NVQTVQVDLQDWARTRAAVSK   78 (238)
Q Consensus        22 ~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~D~~~~~~v~~~~~~   78 (238)
                      |-+|..+|+.|++.|+.|.+.+|++++.+++.+...           ...++-.=+.+.+++++++..
T Consensus        10 G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~   77 (163)
T PF03446_consen   10 GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFG   77 (163)
T ss_dssp             SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhh
Confidence            689999999999999999999999999888876541           244555556777777777654

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.88  E-value=0.033  Score=48.13  Aligned_cols=80  Identities=10%  Similarity=0.106  Sum_probs=51.5

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC---EEEEecCChHhHHHHHhhCC------CceEEEeecCCHHHHHHHHHhc---
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA---IIIALSKTQANLDSLKQAFP------NVQTVQVDLQDWARTRAAVSKV---   79 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~------~~~~~~~D~~~~~~v~~~~~~~---   79 (238)
                      ..+++|.|++|++|...+..+...|+   +|++++++.++++.+.+.++      .......|..+.++..+.+.+.   
T Consensus       176 g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g  255 (410)
T cd08238         176 GGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTGG  255 (410)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhCC
Confidence            35678899999999998887766553   79999999999887765432      1222233443322333333332   


Q ss_pred             CCccEEEEccCC
Q psy14567         80 GPVDVLINNAAV   91 (238)
Q Consensus        80 g~id~li~~ag~   91 (238)
                      ..+|.+|.+.|.
T Consensus       256 ~g~D~vid~~g~  267 (410)
T cd08238         256 QGFDDVFVFVPV  267 (410)
T ss_pred             CCCCEEEEcCCC
Confidence            258999888763

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=95.87  E-value=0.036  Score=47.34  Aligned_cols=117  Identities=13%  Similarity=0.096  Sum_probs=65.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-E----EEE----ecCChHhHHHHHhhCCCce--EE-EeecCCHHHHHHHHH
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-I----IIA----LSKTQANLDSLKQAFPNVQ--TV-QVDLQDWARTRAAVS   77 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~----V~~----~~r~~~~~~~~~~~~~~~~--~~-~~D~~~~~~v~~~~~   77 (238)
                      ++...+.|+|++|.+|.++|..++..|. .    |.+    ++++++.++.....+.+..  +. ..-++. ..    .+
T Consensus        42 ~~p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~-~~----y~  116 (387)
T TIGR01757        42 KKTVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI-DP----YE  116 (387)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec-CC----HH
Confidence            3456678899999999999999988764 3    344    4888877554433222111  00 011111 11    12


Q ss_pred             hcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCceEEEEcc
Q psy14567         78 KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID-HKIQGSIVNVSS  142 (238)
Q Consensus        78 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~g~iv~isS  142 (238)
                      .+..-|++|.+||.... +  .++..+    .++.|..    +++...+.+.+ .++.+.++.+|-
T Consensus       117 ~~kdaDIVVitAG~prk-p--g~tR~d----ll~~N~~----I~k~i~~~I~~~a~~~~iviVVsN  171 (387)
T TIGR01757       117 VFEDADWALLIGAKPRG-P--GMERAD----LLDINGQ----IFADQGKALNAVASKNCKVLVVGN  171 (387)
T ss_pred             HhCCCCEEEECCCCCCC-C--CCCHHH----HHHHHHH----HHHHHHHHHHHhCCCCeEEEEcCC
Confidence            22357999999997532 1  233332    3445544    44555555555 323567777764

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=95.87  E-value=0.027  Score=40.09  Aligned_cols=74  Identities=16%  Similarity=0.232  Sum_probs=49.5

Q ss_pred             CCCCCCCCchHHHHHHHHhh-CCCEEE-EecCCh----------------------HhHHHHHhhCCCceEEEeecCCHH
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQ-HEAIII-ALSKTQ----------------------ANLDSLKQAFPNVQTVQVDLQDWA   70 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~-~G~~V~-~~~r~~----------------------~~~~~~~~~~~~~~~~~~D~~~~~   70 (238)
                      ++|.|++|.+|+.+++.+.+ .+.+++ .++|+.                      ++++++...   .. +..|+|.++
T Consensus         3 V~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~---~D-VvIDfT~p~   78 (124)
T PF01113_consen    3 VGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE---AD-VVIDFTNPD   78 (124)
T ss_dssp             EEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH----S-EEEEES-HH
T ss_pred             EEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc---CC-EEEEcCChH
Confidence            46789999999999999988 677754 456665                      334455444   22 458999998


Q ss_pred             HHHHHHHhc--CCccEEEEccCCC
Q psy14567         71 RTRAAVSKV--GPVDVLINNAAVA   92 (238)
Q Consensus        71 ~v~~~~~~~--g~id~li~~ag~~   92 (238)
                      .+.+.++..  .++.+++-+.|..
T Consensus        79 ~~~~~~~~~~~~g~~~ViGTTG~~  102 (124)
T PF01113_consen   79 AVYDNLEYALKHGVPLVIGTTGFS  102 (124)
T ss_dssp             HHHHHHHHHHHHT-EEEEE-SSSH
T ss_pred             HhHHHHHHHHhCCCCEEEECCCCC
Confidence            887766544  2578888888763

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=95.86  E-value=0.033  Score=46.08  Aligned_cols=77  Identities=13%  Similarity=0.153  Sum_probs=54.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ....++|+|+++++|.+++..+...|++|+.++++.++.+.+.. .+ ... ..|..+.+..+.+.+..  .++|+++++
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~-~g-~~~-~~~~~~~~~~~~~~~~~~~~~~d~vl~~  218 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRA-LG-ADV-AVDYTRPDWPDQVREALGGGGVTVVLDG  218 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC-CCE-EEecCCccHHHHHHHHcCCCCceEEEEC
Confidence            45578999999999999999999999999999999888776643 32 221 23444433333333333  259999998


Q ss_pred             cC
Q psy14567         89 AA   90 (238)
Q Consensus        89 ag   90 (238)
                      .|
T Consensus       219 ~g  220 (324)
T cd08244         219 VG  220 (324)
T ss_pred             CC
Confidence            76

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.86  E-value=0.028  Score=46.56  Aligned_cols=74  Identities=11%  Similarity=0.074  Sum_probs=50.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCH--HHHHHHHHhcCCccEEEEcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDW--ARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~g~id~li~~a   89 (238)
                      ..+++|.|+++++|.+++..+...|++|+.+++++++.+.+.+ .+--.+  .|..+.  +.+.++ . -+.+|.++.+.
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~v--~~~~~~~~~~~~~~-~-~~~~d~vld~~  221 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK-LGAKEV--IPREELQEESIKPL-E-KQRWAGAVDPV  221 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH-cCCCEE--EcchhHHHHHHHhh-c-cCCcCEEEECC
Confidence            4577889999999999999999999999999999988877754 322112  222222  222222 1 13588888777


Q ss_pred             C
Q psy14567         90 A   90 (238)
Q Consensus        90 g   90 (238)
                      |
T Consensus       222 g  222 (326)
T cd08289         222 G  222 (326)
T ss_pred             c
Confidence            5

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=95.84  E-value=0.026  Score=43.17  Aligned_cols=70  Identities=20%  Similarity=0.286  Sum_probs=42.3

Q ss_pred             CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHH-hcCCccEEEEccCCCCCCC
Q psy14567         20 PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS-KVGPVDVLINNAAVARFDR   96 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~-~~g~id~li~~ag~~~~~~   96 (238)
                      .||..|.++|+++..+|++|.++.... .+..    -+.+  -..++.+.+++.+.+. .+..-|++|++|.+..+.+
T Consensus        27 SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~~----p~~~--~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVsDf~p   97 (185)
T PF04127_consen   27 SSGKMGAALAEEAARRGAEVTLIHGPS-SLPP----PPGV--KVIRVESAEEMLEAVKELLPSADIIIMAAAVSDFRP   97 (185)
T ss_dssp             --SHHHHHHHHHHHHTT-EEEEEE-TT-S--------TTE--EEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--SEEE
T ss_pred             CcCHHHHHHHHHHHHCCCEEEEEecCc-cccc----cccc--eEEEecchhhhhhhhccccCcceeEEEecchhheee
Confidence            678999999999999999999887774 2211    1133  3455666666655554 3455699999999876543

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.75  E-value=0.023  Score=41.64  Aligned_cols=41  Identities=20%  Similarity=0.220  Sum_probs=33.8

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP   57 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   57 (238)
                      ++.+|+++.+|++||.+|.++|.+|++.  +++..+.++.+.+
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~   41 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAP   41 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcC
Confidence            3568999999999999999999999998  6666666665553

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PLN02602 lactate dehydrogenase

Probab=95.73  E-value=0.063  Score=45.36  Aligned_cols=110  Identities=11%  Similarity=0.113  Sum_probs=64.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhCCCc------eEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNV------QTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~------~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      .-+.|.|+ |.+|.++|..|+..|.  .+++++++++.++.....+.+.      .-+.. -.+.++       +..-|+
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~-~~dy~~-------~~daDi  108 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILA-STDYAV-------TAGSDL  108 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEe-CCCHHH-------hCCCCE
Confidence            34566785 9999999999988775  7999999886544332222111      11111 122222       234699


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      +|.+||.... +  .++..+    .+..|    .-+++...+.+.+..+.+.++++|-
T Consensus       109 VVitAG~~~k-~--g~tR~d----ll~~N----~~I~~~i~~~I~~~~p~~ivivvtN  155 (350)
T PLN02602        109 CIVTAGARQI-P--GESRLN----LLQRN----VALFRKIIPELAKYSPDTILLIVSN  155 (350)
T ss_pred             EEECCCCCCC-c--CCCHHH----HHHHH----HHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999997532 1  233333    23334    3445566666666554677777764

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.66  E-value=0.022  Score=46.71  Aligned_cols=71  Identities=13%  Similarity=0.097  Sum_probs=48.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCC----CceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      +.+.++|-|+ ||.|++++..|+..|+ +|.+++|+.++.+.+.+.+.    ...+.  ..   +++.+.   +...|++
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~--~~---~~~~~~---~~~aDiV  196 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARAT--AG---SDLAAA---LAAADGL  196 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEE--ec---cchHhh---hCCCCEE
Confidence            3344555554 7899999999999998 89999999999888876542    12221  11   222222   2357999


Q ss_pred             EEccC
Q psy14567         86 INNAA   90 (238)
Q Consensus        86 i~~ag   90 (238)
                      ||+..
T Consensus       197 InaTp  201 (284)
T PRK12549        197 VHATP  201 (284)
T ss_pred             EECCc
Confidence            99964

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=95.66  E-value=0.054  Score=44.23  Aligned_cols=83  Identities=12%  Similarity=0.109  Sum_probs=60.1

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEE
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLI   86 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li   86 (238)
                      +++..-|++|++|+|.+|.-+..--.-.|++|+.+.-..++.+-+.++.+.-  ...|...++-.+.+.+.. ..||+.+
T Consensus       147 qpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD--~~idyk~~d~~~~L~~a~P~GIDvyf  224 (340)
T COG2130         147 QPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFD--AGIDYKAEDFAQALKEACPKGIDVYF  224 (340)
T ss_pred             CCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCc--eeeecCcccHHHHHHHHCCCCeEEEE
Confidence            3456778999999999998777666668999999999999988888766422  124555553333344444 4599999


Q ss_pred             EccCCC
Q psy14567         87 NNAAVA   92 (238)
Q Consensus        87 ~~ag~~   92 (238)
                      -|.|..
T Consensus       225 eNVGg~  230 (340)
T COG2130         225 ENVGGE  230 (340)
T ss_pred             EcCCch
Confidence            999853

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.66  E-value=0.051  Score=46.23  Aligned_cols=77  Identities=19%  Similarity=0.151  Sum_probs=51.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCC-HHHHHHHHHhc--CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQD-WARTRAAVSKV--GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~--g~id~li   86 (238)
                      ...+++|.|+ |+||...+..+...|+ +|++++++.++.+.+.+.....   ..|..+ .+++.+.+.+.  +.+|++|
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~---~i~~~~~~~~~~~~v~~~~~~g~d~vi  260 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATD---CVNPNDYDKPIQEVIVEITDGGVDYSF  260 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCe---EEcccccchhHHHHHHHHhCCCCCEEE
Confidence            4557788875 8999999998888998 7999999998887775543221   223332 12222222222  3689999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .++|.
T Consensus       261 d~~G~  265 (368)
T TIGR02818       261 ECIGN  265 (368)
T ss_pred             ECCCC
Confidence            99884

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.66  E-value=0.085  Score=43.82  Aligned_cols=105  Identities=14%  Similarity=0.147  Sum_probs=61.2

Q ss_pred             CCCCCCCchHHHHHHHHhhCC--CEEEEecCChHhHHH----HHhhCC---CceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANLDS----LKQAFP---NVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~----~~~~~~---~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      .|-|+ |.+|.+++..|+..|  ..|++++++++..+.    +....+   .....   ..+.+       .+..-|++|
T Consensus         4 ~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~---~~d~~-------~l~~aDiVi   72 (308)
T cd05292           4 AIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY---AGDYA-------DCKGADVVV   72 (308)
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe---eCCHH-------HhCCCCEEE
Confidence            34465 789999999999999  589999999876553    221111   11111   12222       233579999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      .++|.....   .++..    ..+..|    ..+++.+.+.+.+....|.++.++.
T Consensus        73 ita~~~~~~---~~~r~----dl~~~n----~~i~~~~~~~l~~~~~~giiiv~tN  117 (308)
T cd05292          73 ITAGANQKP---GETRL----DLLKRN----VAIFKEIIPQILKYAPDAILLVVTN  117 (308)
T ss_pred             EccCCCCCC---CCCHH----HHHHHH----HHHHHHHHHHHHHHCCCeEEEEecC
Confidence            999975321   22222    223334    3444555555555544677777754

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.63  E-value=0.035  Score=47.24  Aligned_cols=77  Identities=14%  Similarity=0.064  Sum_probs=50.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~~   88 (238)
                      ...+++|.|+ |++|..++..+...|+ +|+++++++++.+-+.+...+ .  ..|..+++..+++.+.. +.+|++|.+
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~-~--~i~~~~~~~~~~i~~~~~~g~d~vid~  266 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT-A--TVNAGDPNAVEQVRELTGGGVDYAFEM  266 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc-e--EeCCCchhHHHHHHHHhCCCCCEEEEC
Confidence            3456777875 8999999988888999 699999999887766543221 1  23333333223222221 358999998


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      .|.
T Consensus       267 ~G~  269 (371)
T cd08281         267 AGS  269 (371)
T ss_pred             CCC
Confidence            874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.60  E-value=0.043  Score=45.04  Aligned_cols=78  Identities=17%  Similarity=0.083  Sum_probs=51.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ....++|+|+++++|.+++..+...|++|+.++++.++.+.+... +--..+  +..+.+..+.+.+..  ..+|.++++
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-g~~~~~--~~~~~~~~~~i~~~~~~~~~d~v~~~  215 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARAL-GADHVI--DYRDPDLRERVKALTGGRGVDVVYDP  215 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHc-CCceee--ecCCccHHHHHHHHcCCCCcEEEEEC
Confidence            345778899999999999999999999999999988777666442 211122  222222222222222  258999988


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      .|.
T Consensus       216 ~g~  218 (323)
T cd08241         216 VGG  218 (323)
T ss_pred             ccH
Confidence            763

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.58  E-value=0.017  Score=45.50  Aligned_cols=40  Identities=13%  Similarity=0.017  Sum_probs=34.9

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ   54 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   54 (238)
                      ++|.||+|.+|.++++.|++.|.+|.+.+|++++.+.+..
T Consensus         3 I~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~   42 (219)
T TIGR01915         3 IAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA   42 (219)
T ss_pred             EEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence            5667888999999999999999999999999988776654

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.55  E-value=0.15  Score=34.18  Aligned_cols=38  Identities=13%  Similarity=0.247  Sum_probs=33.9

Q ss_pred             CCCchHHHHHHHHhhCC---CEEEEe-cCChHhHHHHHhhCC
Q psy14567         20 PKPGIGRCIVEKLSQHE---AIIIAL-SKTQANLDSLKQAFP   57 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G---~~V~~~-~r~~~~~~~~~~~~~   57 (238)
                      |+|.+|.++++.|.+.|   .+|.+. +|++++.+++.++.+
T Consensus         6 G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~   47 (96)
T PF03807_consen    6 GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG   47 (96)
T ss_dssp             STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred             CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence            56899999999999999   899855 999999999988875

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.52  E-value=0.068  Score=43.94  Aligned_cols=75  Identities=17%  Similarity=0.129  Sum_probs=50.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCC-HHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQD-WARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~g~id~li~~a   89 (238)
                      +...++|.|+++++|.+++..+...|++|+.+.++.++.+.+.. .+ +..+..+-.+ .+.+.+.   -+++|.++++.
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g-~~~~~~~~~~~~~~i~~~---~~~~d~vl~~~  216 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKE-LG-ADEVVIDDGAIAEQLRAA---PGGFDKVLELV  216 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cC-CcEEEecCccHHHHHHHh---CCCceEEEECC
Confidence            45677899999999999999999999999999999887766643 32 2222112111 2222222   13599999887


Q ss_pred             C
Q psy14567         90 A   90 (238)
Q Consensus        90 g   90 (238)
                      |
T Consensus       217 ~  217 (320)
T cd08243         217 G  217 (320)
T ss_pred             C
Confidence            6

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.51  E-value=0.059  Score=45.78  Aligned_cols=78  Identities=14%  Similarity=0.130  Sum_probs=52.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCH-HHHHHHHHhc--CCccEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDW-ARTRAAVSKV--GPVDVL   85 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~--g~id~l   85 (238)
                      +...+++|.|+ |++|...+..+...|+ +|+.++++.++.+.+.+...+ .+  .|..+. ++..+.+.+.  +.+|++
T Consensus       185 ~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~-~~--i~~~~~~~~~~~~v~~~~~~g~d~v  260 (368)
T cd08300         185 EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGAT-DC--VNPKDHDKPIQQVLVEMTDGGVDYT  260 (368)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCC-EE--EcccccchHHHHHHHHHhCCCCcEE
Confidence            34567788875 8999999999988999 799999999988766543322 22  333332 2333333332  368999


Q ss_pred             EEccCC
Q psy14567         86 INNAAV   91 (238)
Q Consensus        86 i~~ag~   91 (238)
                      +.+.|.
T Consensus       261 id~~g~  266 (368)
T cd08300         261 FECIGN  266 (368)
T ss_pred             EECCCC
Confidence            998873

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08230 glucose_DH Glucose dehydrogenase

Probab=95.48  E-value=0.04  Score=46.51  Aligned_cols=73  Identities=15%  Similarity=0.104  Sum_probs=47.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC---ChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK---TQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      ....++|+|+ |++|...+..+...|++|++++|   ++++.+.+.+ ++ ...  .|..++ +..+ .+..+.+|++|.
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~-~G-a~~--v~~~~~-~~~~-~~~~~~~d~vid  244 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEE-LG-ATY--VNSSKT-PVAE-VKLVGEFDLIIE  244 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHH-cC-CEE--ecCCcc-chhh-hhhcCCCCEEEE
Confidence            3456688885 99999999888889999999988   4566654443 32 222  243332 2222 222346899999


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      ++|
T Consensus       245 ~~g  247 (355)
T cd08230         245 ATG  247 (355)
T ss_pred             CcC
Confidence            987

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>KOG0023|consensus

Probab=95.47  E-value=0.066  Score=44.09  Aligned_cols=73  Identities=14%  Similarity=0.059  Sum_probs=50.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecC-CHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQ-DWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~g~id~li~~a   89 (238)
                      -.+.++|+|+.| ||+--++.-.+.|++|+++++...+-++..+.++ .+.+ .|.+ |++.++++.+..   |.+++++
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LG-Ad~f-v~~~~d~d~~~~~~~~~---dg~~~~v  254 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLG-ADVF-VDSTEDPDIMKAIMKTT---DGGIDTV  254 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcC-ccee-EEecCCHHHHHHHHHhh---cCcceee
Confidence            345667888776 9987777777899999999999866666555442 3333 4566 788888887754   5454444

>PRK05442 malate dehydrogenase; Provisional

Probab=95.44  E-value=0.035  Score=46.46  Aligned_cols=114  Identities=16%  Similarity=0.166  Sum_probs=63.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-------EEEEecCChH--hHH----HHHhhC-CCceEEEeecCCHHHHHHHH
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-------IIIALSKTQA--NLD----SLKQAF-PNVQTVQVDLQDWARTRAAV   76 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-------~V~~~~r~~~--~~~----~~~~~~-~~~~~~~~D~~~~~~v~~~~   76 (238)
                      +.+-+.|+|++|.+|.+++..|+..|.       .++++++++.  .++    ++.+.. +...  ...++.     ...
T Consensus         3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~--~~~i~~-----~~y   75 (326)
T PRK05442          3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLA--GVVITD-----DPN   75 (326)
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcC--CcEEec-----ChH
Confidence            344567789999999999999987653       6889988542  122    222111 1000  001110     011


Q ss_pred             HhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEEcc
Q psy14567         77 SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK-IQGSIVNVSS  142 (238)
Q Consensus        77 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~isS  142 (238)
                      +.+..-|++|.+||.... +  .++..+    .++.|.    -+++.+.+.+.+.. +.+.++.+|.
T Consensus        76 ~~~~daDiVVitaG~~~k-~--g~tR~d----ll~~Na----~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         76 VAFKDADVALLVGARPRG-P--GMERKD----LLEANG----AIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             HHhCCCCEEEEeCCCCCC-C--CCcHHH----HHHHHH----HHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            223356999999997532 1  233333    234444    45566666666633 3567777764

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.44  E-value=0.08  Score=44.62  Aligned_cols=45  Identities=16%  Similarity=0.176  Sum_probs=37.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA   55 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (238)
                      +...+++|.|+ |++|..++..+...|++|+++++++++.+.+.+.
T Consensus       165 ~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~  209 (349)
T TIGR03201       165 KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGF  209 (349)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHh
Confidence            34567788898 9999999999988999999999999888766543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK04148 hypothetical protein; Provisional

Probab=95.44  E-value=0.02  Score=41.16  Aligned_cols=45  Identities=13%  Similarity=0.123  Sum_probs=37.8

Q ss_pred             hHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHH
Q psy14567         24 IGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWA   70 (238)
Q Consensus        24 IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~   70 (238)
                      .|.++|..|++.|+.|++++.++...+...+.  .+.++..|+.+++
T Consensus        27 fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~--~~~~v~dDlf~p~   71 (134)
T PRK04148         27 FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL--GLNAFVDDLFNPN   71 (134)
T ss_pred             CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--CCeEEECcCCCCC
Confidence            77889999999999999999999988877654  4677888887753

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.41  E-value=0.13  Score=40.01  Aligned_cols=36  Identities=17%  Similarity=0.206  Sum_probs=27.5

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCC
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKT   45 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~   45 (238)
                      +|+..+..+++    .||+|.++++.|+..|. ++.++++.
T Consensus        18 kl~~~~VlviG----~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        18 RLLNSHVLIIG----AGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             HhcCCCEEEEC----CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            45555554433    47899999999999998 88888865

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=95.39  E-value=0.0086  Score=38.19  Aligned_cols=34  Identities=18%  Similarity=0.030  Sum_probs=21.1

Q ss_pred             cCCCCCCCCCCchHHH--HHHHHhhCCCEEEEecCCh
Q psy14567         12 TNTKGGDYPKPGIGRC--IVEKLSQHEAIIIALSKTQ   46 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~--ia~~l~~~G~~V~~~~r~~   46 (238)
                      .+.+||+|+|+|.|++  |+..| ..|++.+-++...
T Consensus        39 pK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   39 PKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             -SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             CceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            4668899999999999  55555 6788777666543

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.36  E-value=0.057  Score=44.60  Aligned_cols=77  Identities=8%  Similarity=0.094  Sum_probs=52.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ...+++|.|+++++|.+++..+...|++|+.+.++.++.+.+.+ .+ +. ...|..+.+..+++.+..  ..+|.++.+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g-~~-~~~~~~~~~~~~~~~~~~~~~~~d~vl~~  214 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKA-LG-AD-EVIDSSPEDLAQRVKEATGGAGARLALDA  214 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHh-cC-CC-EEecccchhHHHHHHHHhcCCCceEEEEC
Confidence            44677899999999999999999999999999999888766643 32 11 112333323333333222  258999988


Q ss_pred             cC
Q psy14567         89 AA   90 (238)
Q Consensus        89 ag   90 (238)
                      .|
T Consensus       215 ~g  216 (323)
T cd05282         215 VG  216 (323)
T ss_pred             CC
Confidence            86

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PLN02740 Alcohol dehydrogenase-like

Probab=95.33  E-value=0.059  Score=46.07  Aligned_cols=77  Identities=14%  Similarity=0.096  Sum_probs=51.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCH-HHHHHHHHhc--CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDW-ARTRAAVSKV--GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~--g~id~li   86 (238)
                      ...+++|.|+ |+||..++..+...|+ +|++++++.++++.+.+... -.+  .|..+. ++..+.+.++  +.+|++|
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga-~~~--i~~~~~~~~~~~~v~~~~~~g~dvvi  273 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI-TDF--INPKDSDKPVHERIREMTGGGVDYSF  273 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCC-cEE--EecccccchHHHHHHHHhCCCCCEEE
Confidence            4456777885 8999999998888999 69999999988877754332 122  233332 1222223222  2599999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .++|.
T Consensus       274 d~~G~  278 (381)
T PLN02740        274 ECAGN  278 (381)
T ss_pred             ECCCC
Confidence            99984

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=95.26  E-value=0.14  Score=42.50  Aligned_cols=107  Identities=9%  Similarity=0.106  Sum_probs=62.8

Q ss_pred             CCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHH----HHhhCC-----CceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDS----LKQAFP-----NVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~----~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      .|-|+ |.+|.++|..|+..|.  ++++++.+++.++.    +....+     ++.+. .  .+.++       +..-|+
T Consensus         3 ~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~-~--~~y~~-------~~~aDi   71 (307)
T cd05290           3 VVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIR-A--GDYDD-------CADADI   71 (307)
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEE-E--CCHHH-------hCCCCE
Confidence            34576 8999999999998875  79999998765433    322111     12222 1  23222       234699


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      +|.+||.... +  .++.+.  ...++.|    ..+++...|.+.+..+.+.++.+|-
T Consensus        72 vvitaG~~~k-p--g~tr~R--~dll~~N----~~I~~~i~~~i~~~~p~~i~ivvsN  120 (307)
T cd05290          72 IVITAGPSID-P--GNTDDR--LDLAQTN----AKIIREIMGNITKVTKEAVIILITN  120 (307)
T ss_pred             EEECCCCCCC-C--CCCchH--HHHHHHH----HHHHHHHHHHHHHhCCCeEEEEecC
Confidence            9999997532 2  222111  1123344    4456777777777665666666654

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.24  E-value=0.085  Score=44.78  Aligned_cols=75  Identities=15%  Similarity=0.073  Sum_probs=49.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCC-----HHHHHHHHHhcCCccE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQD-----WARTRAAVSKVGPVDV   84 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-----~~~v~~~~~~~g~id~   84 (238)
                      ...+++|.| +|++|..++..+...|+ +|+.++++.++.+.+.+.... .++  |..+     .+.+.++..  +.+|+
T Consensus       184 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~-~~i--~~~~~~~~~~~~~~~~~~--~g~d~  257 (365)
T cd08277         184 PGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGAT-DFI--NPKDSDKPVSEVIREMTG--GGVDY  257 (365)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCC-cEe--ccccccchHHHHHHHHhC--CCCCE
Confidence            445677777 48999999998888998 799999998887766543221 122  2221     222333322  46899


Q ss_pred             EEEccCC
Q psy14567         85 LINNAAV   91 (238)
Q Consensus        85 li~~ag~   91 (238)
                      +|.+.|.
T Consensus       258 vid~~g~  264 (365)
T cd08277         258 SFECTGN  264 (365)
T ss_pred             EEECCCC
Confidence            9998874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=95.23  E-value=0.16  Score=41.99  Aligned_cols=105  Identities=9%  Similarity=0.177  Sum_probs=61.1

Q ss_pred             CCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhCCCceE---EEeec--CCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         21 KPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNVQT---VQVDL--QDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        21 s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~---~~~D~--~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      +|.+|.++|..|+..+.  ++++++++++.++.....+.+...   ....+  .+.+       .+..-|++|.+||...
T Consensus         4 aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~-------~~~daDivVitag~~r   76 (299)
T TIGR01771         4 AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRSGDYS-------DCKDADLVVITAGAPQ   76 (299)
T ss_pred             cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEecCCHH-------HHCCCCEEEECCCCCC
Confidence            48999999999988775  799999987654433332221110   01112  2222       2234699999999753


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccc
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSI  143 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  143 (238)
                      . +  .++..+    .++.|..    +++...+.+.+..+.+.++.+|.-
T Consensus        77 k-~--g~~R~d----ll~~N~~----i~~~~~~~i~~~~p~~~vivvsNP  115 (299)
T TIGR01771        77 K-P--GETRLE----LVGRNVR----IMKSIVPEVVKSGFDGIFLVATNP  115 (299)
T ss_pred             C-C--CCCHHH----HHHHHHH----HHHHHHHHHHHhCCCeEEEEeCCH
Confidence            2 1  334333    2444544    445555555555546778877753

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.21  E-value=0.11  Score=42.38  Aligned_cols=77  Identities=12%  Similarity=0.082  Sum_probs=51.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ....++|.|+++++|.+++..+...|++|+.++++.++.+.+.. .+--.++  +..+.+....+.+..  ..+|.++++
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vl~~  212 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARA-AGADHVI--NYRDEDFVERVREITGGRGVDVVYDG  212 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-CCCCEEE--eCCchhHHHHHHHHcCCCCeeEEEEC
Confidence            34577889999999999999999999999999998888777643 3321222  222222222222222  258999988


Q ss_pred             cC
Q psy14567         89 AA   90 (238)
Q Consensus        89 ag   90 (238)
                      .|
T Consensus       213 ~~  214 (320)
T cd05286         213 VG  214 (320)
T ss_pred             CC
Confidence            76

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.20  E-value=0.077  Score=44.01  Aligned_cols=77  Identities=10%  Similarity=0.113  Sum_probs=51.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHH-HHHHHHHhc--CCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWA-RTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~--g~id~li~   87 (238)
                      ....++|.|+++++|.+++..+...|++++++.++.++.+.+.+ .+- . ...|..+.+ ..+.+.+..  ..+|.+++
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~-~-~~~~~~~~~~~~~~~~~~~~~~~~d~~i~  216 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKK-LAA-I-ILIRYPDEEGFAPKVKKLTGEKGVNLVLD  216 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCC-c-EEEecCChhHHHHHHHHHhCCCCceEEEE
Confidence            34577899999999999999999999998888898888777744 332 1 122333322 222222222  25899998


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      +.|
T Consensus       217 ~~~  219 (334)
T PTZ00354        217 CVG  219 (334)
T ss_pred             CCc
Confidence            875

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.17  E-value=0.12  Score=43.43  Aligned_cols=71  Identities=15%  Similarity=0.139  Sum_probs=44.7

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-EEEEecCCh---------------------HhH----HHHHhhCCCc--eEEEeec
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQ---------------------ANL----DSLKQAFPNV--QTVQVDL   66 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~---------------------~~~----~~~~~~~~~~--~~~~~D~   66 (238)
                      ++|.|+ ||+|.++++.|+..|. ++.++++..                     .+.    +.+.+..+++  +.+..|+
T Consensus        27 VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~~~  105 (338)
T PRK12475         27 VLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVTDV  105 (338)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            444453 7899999999999998 888888753                     111    2334444543  4445566


Q ss_pred             CCHHHHHHHHHhcCCccEEEEccC
Q psy14567         67 QDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        67 ~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      + ++.++++++   ..|++|.+..
T Consensus       106 ~-~~~~~~~~~---~~DlVid~~D  125 (338)
T PRK12475        106 T-VEELEELVK---EVDLIIDATD  125 (338)
T ss_pred             C-HHHHHHHhc---CCCEEEEcCC
Confidence            4 344555554   4688877763

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=95.11  E-value=0.084  Score=45.01  Aligned_cols=77  Identities=16%  Similarity=0.091  Sum_probs=50.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEE-eecC--CHHHHHHHHHhcCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQ-VDLQ--DWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~D~~--~~~~v~~~~~~~g~id~li   86 (238)
                      ...+++|.| .|++|.+++..+...|+ +|+.++++.++.+.+.. ++--.++. .+.+  ..+.+.++..  +.+|.++
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~-lGa~~~i~~~~~~~~~~~~v~~~~~--~~~d~vl  265 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKE-LGATECINPQDYKKPIQEVLTEMTD--GGVDFSF  265 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCceEecccccchhHHHHHHHHhC--CCCeEEE
Confidence            345667776 58999999999999999 89999999988877754 33212221 1111  1122333322  4699999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .+.|.
T Consensus       266 d~~g~  270 (373)
T cd08299         266 EVIGR  270 (373)
T ss_pred             ECCCC
Confidence            98874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.11  E-value=0.11  Score=39.38  Aligned_cols=69  Identities=13%  Similarity=0.134  Sum_probs=44.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      .+.++++|.|. |.||+++|+.|...|++|+..+|+...........    +   ...+   +++++++   -|+++++.
T Consensus        34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~----~---~~~~---l~ell~~---aDiv~~~~   99 (178)
T PF02826_consen   34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFG----V---EYVS---LDELLAQ---ADIVSLHL   99 (178)
T ss_dssp             STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTT----E---EESS---HHHHHHH----SEEEE-S
T ss_pred             cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhccccc----c---eeee---hhhhcch---hhhhhhhh
Confidence            35566666653 78999999999999999999999987655232211    1   2222   3345554   48998888


Q ss_pred             CCC
Q psy14567         90 AVA   92 (238)
Q Consensus        90 g~~   92 (238)
                      ...
T Consensus       100 plt  102 (178)
T PF02826_consen  100 PLT  102 (178)
T ss_dssp             SSS
T ss_pred             ccc
Confidence            654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.08  E-value=0.072  Score=45.07  Aligned_cols=77  Identities=18%  Similarity=0.115  Sum_probs=50.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      ...+++|.|+ |++|..++..+...|+ +|+++++++++.+.+.+...+ .+  .|..+++..+.+.+..  ..+|++|.
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~-~~--i~~~~~~~~~~i~~~~~~~g~d~vid  251 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGAT-HT--VNSSGTDPVEAIRALTGGFGADVVID  251 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCc-eE--EcCCCcCHHHHHHHHhCCCCCCEEEE
Confidence            3456777875 8999999998888998 599999999887777543321 22  2333332223332222  24899999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      ++|.
T Consensus       252 ~~g~  255 (358)
T TIGR03451       252 AVGR  255 (358)
T ss_pred             CCCC
Confidence            8874

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.08  E-value=0.12  Score=43.76  Aligned_cols=79  Identities=19%  Similarity=0.186  Sum_probs=49.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc---CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV---GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~---g~id~li   86 (238)
                      ...+++|+| +|++|.+++..+...|+ +|+++++++++.+.+.+ .+--.++..+-.+..+..+.+.+.   ..+|+++
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vi  254 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELARE-FGADATIDIDELPDPQRRAIVRDITGGRGADVVI  254 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEE
Confidence            345677787 59999999998888999 99999998888766643 332222222111111111122222   2589999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .+.|.
T Consensus       255 d~~g~  259 (361)
T cd08231         255 EASGH  259 (361)
T ss_pred             ECCCC
Confidence            98874

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=95.07  E-value=0.062  Score=43.99  Aligned_cols=62  Identities=15%  Similarity=0.216  Sum_probs=48.6

Q ss_pred             CCCchHHHHHHHHhhCCCEEEEecCChHhHH-HHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         20 PKPGIGRCIVEKLSQHEAIIIALSKTQANLD-SLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      |||-+|+.++-++-+.|..|++++|-..... ++..     ..+..|+.|.+.+++++++. ++|.+|-
T Consensus        19 GSGELGKEvaIe~QRLG~eViAVDrY~~APAmqVAh-----rs~Vi~MlD~~al~avv~re-kPd~IVp   81 (394)
T COG0027          19 GSGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAH-----RSYVIDMLDGDALRAVVERE-KPDYIVP   81 (394)
T ss_pred             cCCccchHHHHHHHhcCCEEEEecCcCCChhhhhhh-----heeeeeccCHHHHHHHHHhh-CCCeeee
Confidence            5788999999999999999999999876532 3332     24568999999999999776 4666654

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.03  E-value=0.069  Score=38.19  Aligned_cols=77  Identities=10%  Similarity=0.179  Sum_probs=45.5

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEe-cCChHhHHHHHhhCC------------CceEEEeecCCHHHHHHHHHhc--
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIAL-SKTQANLDSLKQAFP------------NVQTVQVDLQDWARTRAAVSKV--   79 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~------------~~~~~~~D~~~~~~v~~~~~~~--   79 (238)
                      ++|-|+ |.+|.++++.|.+.|+.|..+ +|+.++.+...+..+            ..+.+-+-+.|. .+..+.+++  
T Consensus        13 I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~La~   90 (127)
T PF10727_consen   13 IGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQLAQ   90 (127)
T ss_dssp             EEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHHHHC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHHHHH
Confidence            344465 779999999999999988665 677766666655442            344454555553 566555554  


Q ss_pred             ----CCccEEEEccCCCC
Q psy14567         80 ----GPVDVLINNAAVAR   93 (238)
Q Consensus        80 ----g~id~li~~ag~~~   93 (238)
                          .+=.+++|+.|-..
T Consensus        91 ~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   91 YGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             C--S-TT-EEEES-SS--
T ss_pred             hccCCCCcEEEECCCCCh
Confidence                23368999999764

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.02  E-value=0.052  Score=44.88  Aligned_cols=111  Identities=11%  Similarity=0.170  Sum_probs=62.4

Q ss_pred             CCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhCCCceE-E--EeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNVQT-V--QVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~-~--~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      .|+|+ |+||.+++..|+..+.  .+++++++++.++.....+.+... .  ...+....+    .+.+..-|+++.+||
T Consensus         4 aviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~----y~~~~~aDiVvitAG   78 (313)
T COG0039           4 AVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD----YEDLKGADIVVITAG   78 (313)
T ss_pred             EEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC----hhhhcCCCEEEEeCC
Confidence            45688 9999999999987664  799999996654433332221111 1  111111000    222335799999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      .....   .++..|    .++.|..-.    +...+.+.+....+.++.+|-
T Consensus        79 ~prKp---GmtR~D----Ll~~Na~I~----~~i~~~i~~~~~d~ivlVvtN  119 (313)
T COG0039          79 VPRKP---GMTRLD----LLEKNAKIV----KDIAKAIAKYAPDAIVLVVTN  119 (313)
T ss_pred             CCCCC---CCCHHH----HHHhhHHHH----HHHHHHHHhhCCCeEEEEecC
Confidence            76432   244444    245555444    444444455443466666654

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.99  E-value=0.069  Score=48.15  Aligned_cols=66  Identities=14%  Similarity=0.178  Sum_probs=51.6

Q ss_pred             CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         20 PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      |.|.+|+++++.|.++|..|++++.++++.+++++.  +...+..|.+|++.++++  .+.+.|.++.+.
T Consensus       424 G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~--g~~~i~GD~~~~~~L~~a--~i~~a~~viv~~  489 (558)
T PRK10669        424 GYGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRER--GIRAVLGNAANEEIMQLA--HLDCARWLLLTI  489 (558)
T ss_pred             CCChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC--CCeEEEcCCCCHHHHHhc--CccccCEEEEEc
Confidence            346799999999999999999999999999888753  678899999998866554  112456555443

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=94.94  E-value=0.095  Score=44.11  Aligned_cols=77  Identities=19%  Similarity=0.069  Sum_probs=51.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      ...+++|.|+ +++|..+++.+...|+ +|++++++.++.+.+.+..  ... ..|..+.+..+.+.+..  +.+|+++.
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~g--a~~-~i~~~~~~~~~~l~~~~~~~~~d~vid  247 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAEELG--ATI-VLDPTEVDVVAEVRKLTGGGGVDVSFD  247 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC--CCE-EECCCccCHHHHHHHHhCCCCCCEEEE
Confidence            3456778875 8999999999999999 8998988888876665432  221 23444433233333322  24999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      +.|.
T Consensus       248 ~~g~  251 (351)
T cd08233         248 CAGV  251 (351)
T ss_pred             CCCC
Confidence            9873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=94.94  E-value=0.2  Score=40.17  Aligned_cols=31  Identities=10%  Similarity=-0.056  Sum_probs=24.2

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC-EEEEecCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKT   45 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~   45 (238)
                      .++|.|+ ||+|.++++.|+..|. ++.+++..
T Consensus        34 ~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         34 RVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             eEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            3444555 8999999999999997 78877653

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=94.93  E-value=0.076  Score=44.24  Aligned_cols=74  Identities=15%  Similarity=0.195  Sum_probs=50.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      ....+++|.|+++.+|.+++..+...|++|+.++++.++.+.+.+. . -.++..+     +..+.+...+++|+++.+.
T Consensus       161 ~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~-~~~~~~~-----~~~~~v~~~~~~d~~ld~~  233 (334)
T PRK13771        161 KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-A-DYVIVGS-----KFSEEVKKIGGADIVIETV  233 (334)
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-H-HHhcCch-----hHHHHHHhcCCCcEEEEcC
Confidence            3456789999999999999999999999999999988877666432 1 1111111     1112222234688888887


Q ss_pred             C
Q psy14567         90 A   90 (238)
Q Consensus        90 g   90 (238)
                      |
T Consensus       234 g  234 (334)
T PRK13771        234 G  234 (334)
T ss_pred             C
Confidence            6

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=94.92  E-value=0.11  Score=43.02  Aligned_cols=74  Identities=18%  Similarity=0.198  Sum_probs=49.2

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHH-HHHHHHHhcCCccEEEEccC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWA-RTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~g~id~li~~ag   90 (238)
                      ..++|.|+++++|.+++..+...|++|++++++.++.+.+.+ .+--.+  .|..+.+ ...+.... +.+|+++++.|
T Consensus       148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~--~~~~~~~~~~~~~~~~-~~~d~vi~~~~  222 (325)
T cd05280         148 GPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKS-LGASEV--LDREDLLDESKKPLLK-ARWAGAIDTVG  222 (325)
T ss_pred             CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEE--EcchhHHHHHHHHhcC-CCccEEEECCc
Confidence            467899999999999999888899999999999988777754 332112  2222221 11111111 24888888765

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.91  E-value=0.11  Score=44.16  Aligned_cols=74  Identities=16%  Similarity=0.169  Sum_probs=47.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ...+++|.| .|+||..++..+...|++|++++.+.++..+..++.+--.+  .|..+.+.+.+..   +.+|++|.+.|
T Consensus       183 ~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~v--i~~~~~~~~~~~~---~~~D~vid~~g  256 (360)
T PLN02586        183 PGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSF--LVSTDPEKMKAAI---GTMDYIIDTVS  256 (360)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEE--EcCCCHHHHHhhc---CCCCEEEECCC
Confidence            345667755 58999999998888999988887776665555444432112  2333333333322   45899998887

>PTZ00117 malate dehydrogenase; Provisional

Probab=94.90  E-value=0.17  Score=42.23  Aligned_cols=113  Identities=12%  Similarity=0.125  Sum_probs=62.7

Q ss_pred             CCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhCCC---ceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAFPN---VQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~---~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.|.|| |.+|..++..++..| ..+++++++++.++........   .......++...+.+++ +   .-|++|.++|
T Consensus         8 I~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~~l-~---~ADiVVitag   82 (319)
T PTZ00117          8 ISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYEDI-K---DSDVVVITAG   82 (319)
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHHHh-C---CCCEEEECCC
Confidence            455686 889999999999888 6899999987654321111111   00000111100112212 2   4699999998


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccc
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSI  143 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  143 (238)
                      .....   .++..+    .+..|.    -+.+.+.+.+.+..+++.++++|..
T Consensus        83 ~~~~~---g~~r~d----ll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP  124 (319)
T PTZ00117         83 VQRKE---EMTRED----LLTING----KIMKSVAESVKKYCPNAFVICVTNP  124 (319)
T ss_pred             CCCCC---CCCHHH----HHHHHH----HHHHHHHHHHHHHCCCeEEEEecCh
Confidence            75321   233322    234454    4556666666665545667777653

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=94.87  E-value=0.14  Score=43.78  Aligned_cols=75  Identities=15%  Similarity=0.195  Sum_probs=48.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ...+++|.|+ |++|..++......|++|++++++.++..+..++++ ... ..|..+.+.+.+.   .+.+|+++.+.|
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lG-a~~-~i~~~~~~~v~~~---~~~~D~vid~~G  251 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLG-ADS-FLVTTDSQKMKEA---VGTMDFIIDTVS  251 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCC-CcE-EEcCcCHHHHHHh---hCCCcEEEECCC
Confidence            3456777775 899999999888899999988887655334433343 221 1233333334333   246899999887


Q ss_pred             C
Q psy14567         91 V   91 (238)
Q Consensus        91 ~   91 (238)
                      .
T Consensus       252 ~  252 (375)
T PLN02178        252 A  252 (375)
T ss_pred             c
Confidence            3

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.83  E-value=0.14  Score=42.83  Aligned_cols=74  Identities=14%  Similarity=0.134  Sum_probs=48.5

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ..+++|+|+++++|.+++..+...|++|+.+.++ ++.+ +.+..+- . ...|..+.+..+.+. ..+.+|.++++.|
T Consensus       163 g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~-~~~~~g~-~-~~~~~~~~~~~~~l~-~~~~vd~vi~~~g  236 (350)
T cd08248         163 GKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIP-LVKSLGA-D-DVIDYNNEDFEEELT-ERGKFDVILDTVG  236 (350)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHH-HHHHhCC-c-eEEECCChhHHHHHH-hcCCCCEEEECCC
Confidence            5677889999999999999988999998887765 3333 3333332 1 123444433333332 2356999998876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.76  E-value=0.12  Score=43.29  Aligned_cols=78  Identities=15%  Similarity=0.116  Sum_probs=53.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +....++|.|+++++|.+++..+...|.+|+.+.+++++.+.+.. .+ +.. ..+..+.+..+++.+..  +.+|.+++
T Consensus       164 ~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g-~~~-v~~~~~~~~~~~~~~~~~~~~vd~vl~  240 (341)
T cd08297         164 KPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKE-LG-ADA-FVDFKKSDDVEAVKELTGGGGAHAVVV  240 (341)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-cC-CcE-EEcCCCccHHHHHHHHhcCCCCCEEEE
Confidence            345678899999999999999999999999999999888776643 33 211 12333333333333322  35899988


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      +.+
T Consensus       241 ~~~  243 (341)
T cd08297         241 TAV  243 (341)
T ss_pred             cCC
Confidence            664

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=94.69  E-value=0.16  Score=41.44  Aligned_cols=76  Identities=9%  Similarity=-0.044  Sum_probs=47.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCE-EEEecCChHhHHHHHhhCCCceEEEeecCCH-HHHHHHHHhcCCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAI-IIALSKTQANLDSLKQAFPNVQTVQVDLQDW-ARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~g~id~li~~   88 (238)
                      ...+++|.|+ |+||..++..+...|++ |+++++++++.+.+.+.... ..  .|..+. +.+.+... -..+|++|.+
T Consensus       120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~-~~--i~~~~~~~~~~~~~~-~~g~d~vid~  194 (280)
T TIGR03366       120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGAT-AL--AEPEVLAERQGGLQN-GRGVDVALEF  194 (280)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc-Ee--cCchhhHHHHHHHhC-CCCCCEEEEC
Confidence            4456677776 89999999988888986 88888888877655543321 11  222221 11221111 1258999998


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      .|.
T Consensus       195 ~G~  197 (280)
T TIGR03366       195 SGA  197 (280)
T ss_pred             CCC
Confidence            873

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.68  E-value=0.22  Score=39.46  Aligned_cols=35  Identities=20%  Similarity=0.136  Sum_probs=25.2

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecC
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSK   44 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r   44 (238)
                      +|...+..+   .| .||+|.++++.|+..|. ++.+++.
T Consensus        18 ~L~~~~Vli---vG-~GglGs~va~~La~~Gvg~i~lvD~   53 (228)
T cd00757          18 KLKNARVLV---VG-AGGLGSPAAEYLAAAGVGKLGLVDD   53 (228)
T ss_pred             HHhCCcEEE---EC-CCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            444444444   33 47899999999999998 7777754

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=94.65  E-value=0.11  Score=44.10  Aligned_cols=77  Identities=17%  Similarity=0.195  Sum_probs=50.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCH-HHHHHHHHhc--CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDW-ARTRAAVSKV--GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~--g~id~li   86 (238)
                      ...+++|.|+ |++|..++..+...|+ +|++++++.++.+.+.+ ++--.++  |..+. +++.+.+.+.  +.+|+++
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~-~Ga~~~i--~~~~~~~~~~~~v~~~~~~~~d~vi  262 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKK-FGVTEFV--NPKDHDKPVQEVIAEMTGGGVDYSF  262 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH-cCCceEE--cccccchhHHHHHHHHhCCCCCEEE
Confidence            4456777775 8999999988888998 79999999988877654 3322222  33221 2333333322  3589999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .+.|.
T Consensus       263 d~~G~  267 (369)
T cd08301         263 ECTGN  267 (369)
T ss_pred             ECCCC
Confidence            98873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=94.63  E-value=0.17  Score=42.05  Aligned_cols=76  Identities=9%  Similarity=0.011  Sum_probs=49.0

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ..+++|.|+++++|.+++..+... |++|+.+.+++++.+.+.+ .+--.++..+....+.+.+.  .-+++|+++.+.|
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~-~g~~~~~~~~~~~~~~i~~~--~~~~vd~vl~~~~  225 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLE-LGAHHVIDHSKPLKAQLEKL--GLEAVSYVFSLTH  225 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHH-cCCCEEEECCCCHHHHHHHh--cCCCCCEEEEcCC
Confidence            568889999999999998777666 9999999998888777754 33222222121112222221  1135899987654

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>PLN02827 Alcohol dehydrogenase-like

Probab=94.57  E-value=0.18  Score=43.16  Aligned_cols=77  Identities=12%  Similarity=0.072  Sum_probs=49.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCH-HHHHHHHHhc--CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDW-ARTRAAVSKV--GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~--g~id~li   86 (238)
                      ...+++|.|+ |++|..++..+...|+ .|++++++.++.+.+.+..  +.. ..|..+. ++..+.++++  +.+|++|
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lG--a~~-~i~~~~~~~~~~~~v~~~~~~g~d~vi  268 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFG--VTD-FINPNDLSEPIQQVIKRMTGGGADYSF  268 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcC--CcE-EEcccccchHHHHHHHHHhCCCCCEEE
Confidence            3556777775 8999999998888998 5777888888776664432  221 1333321 2333333332  3689999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .++|.
T Consensus       269 d~~G~  273 (378)
T PLN02827        269 ECVGD  273 (378)
T ss_pred             ECCCC
Confidence            99884

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=94.57  E-value=0.14  Score=43.06  Aligned_cols=78  Identities=14%  Similarity=0.064  Sum_probs=48.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCE-EEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCcc-EEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAI-IIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVD-VLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id-~li~~   88 (238)
                      ...+++|.| .|++|..++..+...|++ |++++++.++.+.+.+ .+--.++..+-.+.+.+.+.... .++| ++|.+
T Consensus       160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~Ga~~~i~~~~~~~~~~~~~~~~-~~~d~~v~d~  236 (347)
T PRK10309        160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKS-LGAMQTFNSREMSAPQIQSVLRE-LRFDQLILET  236 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH-cCCceEecCcccCHHHHHHHhcC-CCCCeEEEEC
Confidence            345778887 489999999988889996 6888888888776644 33222222221122333333222 2477 77887


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      +|.
T Consensus       237 ~G~  239 (347)
T PRK10309        237 AGV  239 (347)
T ss_pred             CCC
Confidence            774

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=94.56  E-value=0.25  Score=39.62  Aligned_cols=79  Identities=13%  Similarity=0.114  Sum_probs=51.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ....++|.|+++++|..++......|++|+.+.++.++.+.+....+ ......|..+.+..+++.+..  ..+|.++.+
T Consensus       108 ~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  186 (293)
T cd05195         108 KGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGG-PVDHIFSSRDLSFADGILRATGGRGVDVVLNS  186 (293)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCC-CcceEeecCchhHHHHHHHHhCCCCceEEEeC
Confidence            34566788999999999998888899999999998887777665432 111123333333323332222  258999887


Q ss_pred             cC
Q psy14567         89 AA   90 (238)
Q Consensus        89 ag   90 (238)
                      .|
T Consensus       187 ~~  188 (293)
T cd05195         187 LS  188 (293)
T ss_pred             CC
Confidence            76

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>KOG4288|consensus

Probab=94.52  E-value=0.18  Score=39.67  Aligned_cols=192  Identities=11%  Similarity=-0.051  Sum_probs=108.3

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      .+.-|+.+..|+++++.....|..|.++.||+.  +++.+..+ .+.+...|.-..+-.+...   -++..++.++|.+.
T Consensus        55 tlvlggnpfsgs~vlk~A~~vv~svgilsen~~--k~~l~sw~~~vswh~gnsfssn~~k~~l---~g~t~v~e~~ggfg  129 (283)
T KOG4288|consen   55 TLVLGGNPFSGSEVLKNATNVVHSVGILSENEN--KQTLSSWPTYVSWHRGNSFSSNPNKLKL---SGPTFVYEMMGGFG  129 (283)
T ss_pred             HhhhcCCCcchHHHHHHHHhhceeeeEeecccC--cchhhCCCcccchhhccccccCcchhhh---cCCcccHHHhcCcc
Confidence            356799999999999999999999999999976  34444333 3444555542211111111   13555555665543


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHHh
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL  173 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~  173 (238)
                      .           ...+..+|=.......+++.    +.+ -.++|+||.-....+.--...|--+|.+.+.=.      +
T Consensus       130 n-----------~~~m~~ing~ani~a~kaa~----~~g-v~~fvyISa~d~~~~~~i~rGY~~gKR~AE~El------l  187 (283)
T KOG4288|consen  130 N-----------IILMDRINGTANINAVKAAA----KAG-VPRFVYISAHDFGLPPLIPRGYIEGKREAEAEL------L  187 (283)
T ss_pred             c-----------hHHHHHhccHhhHHHHHHHH----HcC-CceEEEEEhhhcCCCCccchhhhccchHHHHHH------H
Confidence            1           23334455555555666664    333 468999987655333222236888888776522      2


Q ss_pred             CCCCeEEEEEeCCceecCcccCCCCC-----C------------CccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        174 GPYNIRVNSVQPTVVMTQMGRTGWSD-----P------------AKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       174 ~~~~i~v~~i~PG~v~t~~~~~~~~~-----~------------~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      +..+.|-..+.||++.....-.....     .            +..+.-.-...+......+++|.+++-.++|++
T Consensus       188 ~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~  264 (283)
T KOG4288|consen  188 KKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPD  264 (283)
T ss_pred             HhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCC
Confidence            23345556789999976532111100     0            011111111123344567888888887777764

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=94.52  E-value=0.14  Score=42.84  Aligned_cols=78  Identities=17%  Similarity=0.093  Sum_probs=48.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCE-EEEecCChHhHHHHHhhCCCceEEEeecCC----HHHHHHHHHhcCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAI-IIALSKTQANLDSLKQAFPNVQTVQVDLQD----WARTRAAVSKVGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~----~~~v~~~~~~~g~id~l   85 (238)
                      ....++|+| .+++|.+++..+...|.+ |+++.+++++.+.+.+ .+.-.++..+-.+    .+.+.+.... .++|++
T Consensus       162 ~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~~~~~~~~-~~~d~v  238 (343)
T cd05285         162 PGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKE-LGATHTVNVRTEDTPESAEKIAELLGG-KGPDVV  238 (343)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-cCCcEEeccccccchhHHHHHHHHhCC-CCCCEE
Confidence            345667766 589999999988889997 8888888887766644 3222222222112    2223333221 248999


Q ss_pred             EEccCC
Q psy14567         86 INNAAV   91 (238)
Q Consensus        86 i~~ag~   91 (238)
                      +.+.|.
T Consensus       239 ld~~g~  244 (343)
T cd05285         239 IECTGA  244 (343)
T ss_pred             EECCCC
Confidence            998873

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=94.50  E-value=0.18  Score=43.22  Aligned_cols=44  Identities=9%  Similarity=0.012  Sum_probs=37.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ   54 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   54 (238)
                      ...+++|+|++|++|.+++..+...|+++++++++.++.+.+.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~  236 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRA  236 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH
Confidence            44578899999999999999888899998888998888776655

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.44  E-value=0.05  Score=47.49  Aligned_cols=40  Identities=10%  Similarity=0.067  Sum_probs=33.9

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ   54 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   54 (238)
                      ++|.||+|++|.++++.|.+.|.+|.+.+|+++...+...
T Consensus         3 I~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~   42 (437)
T PRK08655          3 ISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK   42 (437)
T ss_pred             EEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence            5678999999999999999999999999999877544443

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.41  E-value=0.18  Score=42.14  Aligned_cols=75  Identities=13%  Similarity=0.174  Sum_probs=50.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ...+++|.| ++++|.+++..+...|++|+.+++++++.+.+.+ .+--.+  .|..+.+ ..+.+.+.+.+|.++.+.|
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~-~g~~~~--i~~~~~~-~~~~~~~~~~~d~vi~~~g  237 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARK-LGAHHY--IDTSKED-VAEALQELGGAKLILATAP  237 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH-cCCcEE--ecCCCcc-HHHHHHhcCCCCEEEECCC
Confidence            445778888 7999999999888899999999999888776644 332112  2333222 3223333346899987654

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.41  E-value=0.34  Score=38.71  Aligned_cols=37  Identities=16%  Similarity=0.128  Sum_probs=26.6

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCCh
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQ   46 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~   46 (238)
                      +|+..+..++    |.||+|..+++.|+..|. ++.+++...
T Consensus        21 ~L~~~~Vlvv----G~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        21 ALKASRVLIV----GLGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHhCCcEEEE----CcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            4444444443    337899999999999998 788887654

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=94.39  E-value=0.3  Score=35.49  Aligned_cols=29  Identities=17%  Similarity=0.015  Sum_probs=23.8

Q ss_pred             CCCCCCCchHHHHHHHHhhCCC-EEEEecCC
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEA-IIIALSKT   45 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~   45 (238)
                      +|.|+ ||+|.++++.|+..|. ++.+++..
T Consensus         3 liiG~-GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           3 LLVGL-GGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             EEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            44454 8999999999999998 78888754

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=94.35  E-value=0.14  Score=42.77  Aligned_cols=77  Identities=9%  Similarity=0.104  Sum_probs=48.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh----HhHHHHHhhCCCceEEEeecCCH--HHHHHHHHhc--CCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ----ANLDSLKQAFPNVQTVQVDLQDW--ARTRAAVSKV--GPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~--g~i   82 (238)
                      ....++|.|+++++|.++++.+...|.+|+++.++.    ++.+.+. ..+--.++.  ..+.  ++..+.+...  +.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~--~~~~~~~~~~~~i~~~~~~~~  222 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-ALGADHVLT--EEELRSLLATELLKSAPGGRP  222 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hcCCCEEEe--CcccccccHHHHHHHHcCCCc
Confidence            456778889999999999999999999988888765    3444443 332222222  2211  0222223222  258


Q ss_pred             cEEEEccC
Q psy14567         83 DVLINNAA   90 (238)
Q Consensus        83 d~li~~ag   90 (238)
                      |.++.+.|
T Consensus       223 d~vld~~g  230 (341)
T cd08290         223 KLALNCVG  230 (341)
T ss_pred             eEEEECcC
Confidence            99998877

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=94.32  E-value=0.19  Score=43.22  Aligned_cols=43  Identities=7%  Similarity=-0.024  Sum_probs=36.6

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ   54 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   54 (238)
                      ...++|.|++|++|.+++..+...|++++.++++.++.+.+.+
T Consensus       190 g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~  232 (398)
T TIGR01751       190 GDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRE  232 (398)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHH
Confidence            4577889999999999999888999998888888877766655

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>smart00829 PKS_ER Enoylreductase

Probab=94.29  E-value=0.2  Score=40.25  Aligned_cols=78  Identities=15%  Similarity=0.151  Sum_probs=49.5

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNA   89 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~a   89 (238)
                      ...++|.|+++++|..++..+...|++|+.++++.++.+.+.+ .+-..-...|..+.+..+.+.+..  .++|.++.+.
T Consensus       105 g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~  183 (288)
T smart00829      105 GESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRE-LGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSL  183 (288)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCC
Confidence            3467788999999999998888899999999999888776643 321000112222322222222222  2488888776


Q ss_pred             C
Q psy14567         90 A   90 (238)
Q Consensus        90 g   90 (238)
                      |
T Consensus       184 ~  184 (288)
T smart00829      184 A  184 (288)
T ss_pred             C
Confidence            5

Enoylreductase in Polyketide synthases.

>PRK08223 hypothetical protein; Validated

Probab=94.24  E-value=0.22  Score=40.72  Aligned_cols=37  Identities=16%  Similarity=0.156  Sum_probs=27.1

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCCh
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQ   46 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~   46 (238)
                      +|+..+..+++.    ||+|..++..|+..|. ++.+++...
T Consensus        24 kL~~s~VlIvG~----GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         24 RLRNSRVAIAGL----GGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             HHhcCCEEEECC----CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            445555444433    6899999999999998 788887643

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.18  E-value=0.14  Score=41.97  Aligned_cols=44  Identities=18%  Similarity=0.185  Sum_probs=38.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ   54 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   54 (238)
                      ....++|.|+++++|.+++..+...|++|+.++++.++.+.+.+
T Consensus       132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~  175 (305)
T cd08270         132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE  175 (305)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence            35678889999999999999999999999999999888777765

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=94.08  E-value=0.59  Score=41.55  Aligned_cols=75  Identities=12%  Similarity=0.102  Sum_probs=50.8

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCC-------------HHHH---HH-HH
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQD-------------WART---RA-AV   76 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-------------~~~v---~~-~~   76 (238)
                      .++|.|+ |.+|...+..+...|+.|++++++.++++..++.  ..+++..|..+             .+..   .+ +.
T Consensus       166 kVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~l--Ga~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~~  242 (511)
T TIGR00561       166 KVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSM--GAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELFA  242 (511)
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--CCeEEeccccccccccccceeecCHHHHHHHHHHHH
Confidence            4444554 7899999999999999999999999988777653  23444444321             1212   11 22


Q ss_pred             HhcCCccEEEEccCC
Q psy14567         77 SKVGPVDVLINNAAV   91 (238)
Q Consensus        77 ~~~g~id~li~~ag~   91 (238)
                      +++...|++|+++-+
T Consensus       243 e~~~~~DIVI~Tali  257 (511)
T TIGR00561       243 AQAKEVDIIITTALI  257 (511)
T ss_pred             HHhCCCCEEEECccc
Confidence            445679999999943

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK06223 malate dehydrogenase; Reviewed

Probab=94.08  E-value=0.13  Score=42.60  Aligned_cols=110  Identities=13%  Similarity=0.193  Sum_probs=59.8

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCC---ceE--EEeec-CCHHHHHHHHHhcCCccEEE
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPN---VQT--VQVDL-QDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~---~~~--~~~D~-~~~~~v~~~~~~~g~id~li   86 (238)
                      .+.|.|+ |.+|..++..++..|. +|++++++++.++........   ...  ..... +|.+   +    +..-|++|
T Consensus         4 KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~~---~----~~~aDiVi   75 (307)
T PRK06223          4 KISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDYE---D----IAGSDVVV   75 (307)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCHH---H----HCCCCEEE
Confidence            3455687 8899999999998875 899999987665432211111   000  01111 2222   1    23469999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      .++|.... +  ..+..+    .+.-|+    -+.+.+.+.+.+..+++.+++++.
T Consensus        76 i~~~~p~~-~--~~~r~~----~~~~n~----~i~~~i~~~i~~~~~~~~viv~tN  120 (307)
T PRK06223         76 ITAGVPRK-P--GMSRDD----LLGINA----KIMKDVAEGIKKYAPDAIVIVVTN  120 (307)
T ss_pred             ECCCCCCC-c--CCCHHH----HHHHHH----HHHHHHHHHHHHHCCCeEEEEecC
Confidence            99986532 1  222222    223344    344455555544443556666654

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.05  E-value=0.25  Score=41.32  Aligned_cols=74  Identities=20%  Similarity=0.266  Sum_probs=47.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ....++|.|++|++|.+++..+...|++|+.++++. +.+.+. +.+ +..+ .+..+ +...+ ....  ..+|++|.+
T Consensus       177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~-~~g-~~~~-~~~~~-~~~~~-~~~~~~~~~d~vi~~  250 (350)
T cd08274         177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-ALG-ADTV-ILRDA-PLLAD-AKALGGEPVDVVADV  250 (350)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-hcC-CeEE-EeCCC-ccHHH-HHhhCCCCCcEEEec
Confidence            345788899999999999999999999988887665 555453 333 2222 22211 12222 2221  358999988


Q ss_pred             cC
Q psy14567         89 AA   90 (238)
Q Consensus        89 ag   90 (238)
                      .|
T Consensus       251 ~g  252 (350)
T cd08274         251 VG  252 (350)
T ss_pred             CC
Confidence            77

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.04  E-value=0.15  Score=44.64  Aligned_cols=72  Identities=14%  Similarity=0.097  Sum_probs=46.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh--HHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.++|+|.. +.|.++|+.|++.|++|.+.+.+...  .+++.+...++.++..+.. .+    ..   ...|.||.+.|
T Consensus         6 ~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~~~gi~~~~g~~~-~~----~~---~~~d~vv~spg   76 (445)
T PRK04308          6 KKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKMFDGLVFYTGRLK-DA----LD---NGFDILALSPG   76 (445)
T ss_pred             CEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhccCCcEEEeCCCC-HH----HH---hCCCEEEECCC
Confidence            456667764 89999999999999999998876532  2334322124444433322 11    12   24799999999


Q ss_pred             CCC
Q psy14567         91 VAR   93 (238)
Q Consensus        91 ~~~   93 (238)
                      +.+
T Consensus        77 i~~   79 (445)
T PRK04308         77 ISE   79 (445)
T ss_pred             CCC
Confidence            874

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=94.03  E-value=0.32  Score=40.29  Aligned_cols=77  Identities=10%  Similarity=0.017  Sum_probs=50.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ....++|.|+++.+|.+++..+...|++|+.+.++.++.+.+.+ .+--.++  +..+.+..+.+.+..  +.+|+++.+
T Consensus       140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~-~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vl~~  216 (327)
T PRK10754        140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKK-AGAWQVI--NYREENIVERVKEITGGKKVRVVYDS  216 (327)
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-CCCCEEE--cCCCCcHHHHHHHHcCCCCeEEEEEC
Confidence            34577889999999999998888899999999988888766643 3322222  222222222222211  248999887


Q ss_pred             cC
Q psy14567         89 AA   90 (238)
Q Consensus        89 ag   90 (238)
                      .|
T Consensus       217 ~~  218 (327)
T PRK10754        217 VG  218 (327)
T ss_pred             Cc
Confidence            76

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.03  E-value=0.095  Score=37.05  Aligned_cols=69  Identities=19%  Similarity=0.226  Sum_probs=40.4

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-E-EEEecCChHhHHHHHhhCC---CceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-I-IIALSKTQANLDSLKQAFP---NVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-~-V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      ++|.||||-+|..+++.|.++-. . +.+++++.+..+.+....+   ...-..++-.+.+.+       .+.|++|.+.
T Consensus         2 V~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~Dvvf~a~   74 (121)
T PF01118_consen    2 VAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEEL-------SDVDVVFLAL   74 (121)
T ss_dssp             EEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHH-------TTESEEEE-S
T ss_pred             EEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHh-------hcCCEEEecC
Confidence            46789999999999999998654 5 4455666534334444333   222222221333322       3589998886


Q ss_pred             C
Q psy14567         90 A   90 (238)
Q Consensus        90 g   90 (238)
                      +
T Consensus        75 ~   75 (121)
T PF01118_consen   75 P   75 (121)
T ss_dssp             C
T ss_pred             c
Confidence            4

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.95  E-value=0.79  Score=40.78  Aligned_cols=124  Identities=14%  Similarity=0.152  Sum_probs=65.7

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH--hHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA--NLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      +++++..++++    |+.|.++|+.|.+.|++|...+.+..  ..+.+.+...++.+...+.. ++    .++   ..|.
T Consensus         5 ~~~~~i~v~G~----G~sG~s~a~~L~~~G~~v~~~D~~~~~~~~~~L~~~~~~~~~~~g~~~-~~----~~~---~~d~   72 (498)
T PRK02006          5 LQGPMVLVLGL----GESGLAMARWCARHGARLRVADTREAPPNLAALRAELPDAEFVGGPFD-PA----LLD---GVDL   72 (498)
T ss_pred             cCCCEEEEEee----cHhHHHHHHHHHHCCCEEEEEcCCCCchhHHHHHhhcCCcEEEeCCCc-hh----Hhc---CCCE
Confidence            55555555555    57888999999999999999986542  23345444334443332221 22    222   4799


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSI--FDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK  146 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~--~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  146 (238)
                      +|.+.|+....   +...+. +...  ..+.+.+-..++...+..+........+|.|+.+.|.
T Consensus        73 vv~sp~I~~~~---~~~~~~-~~~a~~~~i~v~~~~e~~~~~~~~l~~~~~~~~~I~VTGTnGK  132 (498)
T PRK02006         73 VALSPGLSPLE---AALAPL-VAAARERGIPVWGEIELFAQALAALGASGYAPKVLAITGTNGK  132 (498)
T ss_pred             EEECCCCCCcc---cccCHH-HHHHHHCCCcEEEHHHHHHHHHhhhccccCCCCEEEEECCCcH
Confidence            99999976421   001111 2222  2344444444444433333222112367777766653

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=93.94  E-value=0.055  Score=45.51  Aligned_cols=35  Identities=11%  Similarity=0.128  Sum_probs=26.8

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC---EEEEecCChHh
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA---IIIALSKTQAN   48 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~---~V~~~~r~~~~   48 (238)
                      .++|.||||.+|.++++.|.++|+   ++..+.+.++.
T Consensus         3 ~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~   40 (334)
T PRK14874          3 NVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSA   40 (334)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccC
Confidence            357789999999999999999765   45666655443

>PRK14968 putative methyltransferase; Provisional

Probab=93.94  E-value=0.27  Score=37.26  Aligned_cols=73  Identities=14%  Similarity=0.126  Sum_probs=43.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CC--ceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PN--VQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~--~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      +.+.++-.|+..|.   ++..++..+.+|+.++++++..+...+..     .+  +.++.+|+.+.     +.+  .++|
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~~~--~~~d   92 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP-----FRG--DKFD   92 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc-----ccc--cCce
Confidence            33344444544433   34444445889999999987665543322     22  67778887542     112  2589


Q ss_pred             EEEEccCCCC
Q psy14567         84 VLINNAAVAR   93 (238)
Q Consensus        84 ~li~~ag~~~   93 (238)
                      .++.|..+..
T Consensus        93 ~vi~n~p~~~  102 (188)
T PRK14968         93 VILFNPPYLP  102 (188)
T ss_pred             EEEECCCcCC
Confidence            9999887654

>cd08251 polyketide_synthase polyketide synthase

Probab=93.83  E-value=0.41  Score=38.83  Aligned_cols=77  Identities=19%  Similarity=0.151  Sum_probs=50.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ....++|.|+++++|..++..+...|++|+.+.++.++.+.+.. .+--.++  |....+....+.+..  ..+|.++.+
T Consensus       120 ~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~--~~~~~~~~~~i~~~~~~~~~d~v~~~  196 (303)
T cd08251         120 KGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQ-LGVPHVI--NYVEEDFEEEIMRLTGGRGVDVVINT  196 (303)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH-cCCCEEE--eCCCccHHHHHHHHcCCCCceEEEEC
Confidence            34567888999999999999988999999999998888777743 3322222  222222222222212  248888876


Q ss_pred             cC
Q psy14567         89 AA   90 (238)
Q Consensus        89 ag   90 (238)
                      .+
T Consensus       197 ~~  198 (303)
T cd08251         197 LS  198 (303)
T ss_pred             Cc
Confidence            54

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=93.83  E-value=0.23  Score=40.75  Aligned_cols=77  Identities=17%  Similarity=0.075  Sum_probs=47.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCE-EEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAI-IIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      ....++|.| ++++|.++++.+...|++ |+++++++++.+.+. .++--.++  +-...+..+.+.+..  .++|++++
T Consensus       129 ~~~~vlI~g-~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~~~~~l~~~~~~~~vd~vld  204 (312)
T cd08269         129 AGKTVAVIG-AGFIGLLFLQLAAAAGARRVIAIDRRPARLALAR-ELGATEVV--TDDSEAIVERVRELTGGAGADVVIE  204 (312)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCceEe--cCCCcCHHHHHHHHcCCCCCCEEEE
Confidence            345667786 589999999999899998 999988887766443 33221122  111112222222222  25999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      +.|.
T Consensus       205 ~~g~  208 (312)
T cd08269         205 AVGH  208 (312)
T ss_pred             CCCC
Confidence            8763

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>COG5322 Predicted dehydrogenase [General function prediction only]

Probab=93.80  E-value=0.083  Score=42.41  Aligned_cols=37  Identities=14%  Similarity=-0.000  Sum_probs=31.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA   47 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~   47 (238)
                      ++.++.|.|++|-||.++|+.|+.++....++.|..+
T Consensus       166 sqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~ae  202 (351)
T COG5322         166 SQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAE  202 (351)
T ss_pred             HHCeEEEecCCchHHHHHHHHhccccCEEEEecccHH
Confidence            4567889999999999999999999998888776543

>KOG1196|consensus

Probab=93.80  E-value=0.21  Score=40.85  Aligned_cols=83  Identities=13%  Similarity=0.165  Sum_probs=61.3

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcC--CccEE
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVG--PVDVL   85 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g--~id~l   85 (238)
                      .+++..|+.|.||+|-.|.-+-+-..-.|++|+...-+.++..-+..+++.-.  ..|.-++.++.+++++..  .+|+.
T Consensus       150 ~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~--afNYK~e~~~~~aL~r~~P~GIDiY  227 (343)
T KOG1196|consen  150 SPKKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDD--AFNYKEESDLSAALKRCFPEGIDIY  227 (343)
T ss_pred             CCCCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCcc--ceeccCccCHHHHHHHhCCCcceEE
Confidence            45677899999999999986665555689999999999998888887765322  234444445666666652  59999


Q ss_pred             EEccCCC
Q psy14567         86 INNAAVA   92 (238)
Q Consensus        86 i~~ag~~   92 (238)
                      +-|.|..
T Consensus       228 feNVGG~  234 (343)
T KOG1196|consen  228 FENVGGK  234 (343)
T ss_pred             EeccCcH
Confidence            9999864

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=93.79  E-value=0.34  Score=42.05  Aligned_cols=40  Identities=10%  Similarity=-0.061  Sum_probs=32.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHH
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDS   51 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~   51 (238)
                      ..++++|.|. |.||+.++..|...|++|+++++++.+..+
T Consensus       211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~  250 (425)
T PRK05476        211 AGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQ  250 (425)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHH
Confidence            4456667775 689999999999999999999988766443

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=93.75  E-value=0.14  Score=38.94  Aligned_cols=38  Identities=11%  Similarity=0.114  Sum_probs=30.4

Q ss_pred             CCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh
Q psy14567         17 GDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA   55 (238)
Q Consensus        17 itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (238)
                      |.|+ |-+|+.+|..++..|++|.+.+++++.++...+.
T Consensus         4 ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~   41 (180)
T PF02737_consen    4 VIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKR   41 (180)
T ss_dssp             EES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred             EEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence            4455 8899999999999999999999999887665443

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=93.72  E-value=0.27  Score=40.81  Aligned_cols=30  Identities=17%  Similarity=0.005  Sum_probs=24.1

Q ss_pred             CCCCCCCchHHHHHHHHhhCCC-EEEEecCCh
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQ   46 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~   46 (238)
                      +|.|+ ||+|.++++.|+..|. ++.+++...
T Consensus         3 lIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~   33 (312)
T cd01489           3 LVVGA-GGIGCELLKNLVLTGFGEIHIIDLDT   33 (312)
T ss_pred             EEECC-CHHHHHHHHHHHHhcCCeEEEEcCCC
Confidence            44554 8999999999999998 788887543

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=93.70  E-value=0.23  Score=41.46  Aligned_cols=77  Identities=16%  Similarity=-0.011  Sum_probs=49.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCE-EEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAI-IIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      ....++|.| ++++|.+++..+...|.+ |+++.++.++.+.+.. .+.-.+  .|-.+.+..+.+.+..  ..+|++++
T Consensus       165 ~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~-~g~~~~--~~~~~~~~~~~i~~~~~~~~vd~vld  240 (343)
T cd08235         165 PGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKK-LGADYT--IDAAEEDLVEKVRELTDGRGADVVIV  240 (343)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH-hCCcEE--ecCCccCHHHHHHHHhCCcCCCEEEE
Confidence            445778886 689999999988888998 8888888888776643 322122  2332332222222222  24899999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      ++|.
T Consensus       241 ~~~~  244 (343)
T cd08235         241 ATGS  244 (343)
T ss_pred             CCCC
Confidence            8773

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=93.65  E-value=0.058  Score=45.54  Aligned_cols=34  Identities=21%  Similarity=0.130  Sum_probs=26.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhC-CCEEEEecCCh
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQ   46 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~   46 (238)
                      ..++|.||||.+|..+++.|.++ +.+++.+.++.
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~   37 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRS   37 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECcc
Confidence            35677899999999999999987 56776655543

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=93.63  E-value=0.3  Score=41.81  Aligned_cols=26  Identities=12%  Similarity=0.088  Sum_probs=22.8

Q ss_pred             CCCchHHHHHHHHhhCCC-EEEEecCC
Q psy14567         20 PKPGIGRCIVEKLSQHEA-IIIALSKT   45 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~-~V~~~~r~   45 (238)
                      |.||+|.++++.|+..|. ++.++++.
T Consensus       142 G~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        142 GAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             CCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            447899999999999998 78888876

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=93.63  E-value=0.26  Score=41.30  Aligned_cols=76  Identities=18%  Similarity=0.164  Sum_probs=50.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      +..+++|.| .+++|..++..+...|.+|+.+.++.++.+.+.. .+ +. ...|..++.+..+.+..+  +++|.++.+
T Consensus       165 ~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~-~g-~~-~~i~~~~~~~~~~~~~~~~~~~~d~vi~~  240 (345)
T cd08260         165 PGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARE-LG-AV-ATVNASEVEDVAAAVRDLTGGGAHVSVDA  240 (345)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHH-hC-CC-EEEccccchhHHHHHHHHhCCCCCEEEEc
Confidence            345778888 6899999999999999999999999888777754 32 21 112333312222222222  268999888


Q ss_pred             cC
Q psy14567         89 AA   90 (238)
Q Consensus        89 ag   90 (238)
                      .|
T Consensus       241 ~g  242 (345)
T cd08260         241 LG  242 (345)
T ss_pred             CC
Confidence            66

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=93.57  E-value=0.19  Score=42.14  Aligned_cols=76  Identities=11%  Similarity=0.061  Sum_probs=48.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~~a   89 (238)
                      ...+++|.|+++++|.+++..+...|++|+.+. +.++.+.+. ..+--.+  .+..+.+..+.+.+.. +++|.++++.
T Consensus       154 ~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~-~~g~~~v--~~~~~~~~~~~l~~~~~~~~d~vl~~~  229 (339)
T cd08249         154 KGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-SLGADAV--FDYHDPDVVEDIRAATGGKLRYALDCI  229 (339)
T ss_pred             CCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHH-hcCCCEE--EECCCchHHHHHHHhcCCCeeEEEEee
Confidence            456788999999999999999999999988877 445555553 3432122  2333322222221111 4689999877


Q ss_pred             C
Q psy14567         90 A   90 (238)
Q Consensus        90 g   90 (238)
                      |
T Consensus       230 g  230 (339)
T cd08249         230 S  230 (339)
T ss_pred             c
Confidence            6

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=93.45  E-value=0.064  Score=45.89  Aligned_cols=39  Identities=10%  Similarity=-0.062  Sum_probs=30.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhH
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANL   49 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~   49 (238)
                      +.+.++|-||||.+|.++.+.|.++ +.+|..+.++++..
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG   76 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG   76 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC
Confidence            3335677899999999999999998 56888887765543

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=93.39  E-value=0.32  Score=42.78  Aligned_cols=70  Identities=23%  Similarity=0.201  Sum_probs=48.1

Q ss_pred             CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCCCC
Q psy14567         20 PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDR   96 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~~~   96 (238)
                      .||-+|.++|+++..+|++|.+++-..+ +    ..-.++..+  ++.+-+++.+.+++.-+.|++|++|.+..+.+
T Consensus       280 SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~----~~p~~v~~i--~V~ta~eM~~av~~~~~~Di~I~aAAVaDyrp  349 (475)
T PRK13982        280 SSGKQGFAIAAAAAAAGAEVTLISGPVD-L----ADPQGVKVI--HVESARQMLAAVEAALPADIAIFAAAVADWRV  349 (475)
T ss_pred             CchHHHHHHHHHHHHCCCcEEEEeCCcC-C----CCCCCceEE--EecCHHHHHHHHHhhCCCCEEEEeccccceee
Confidence            5788999999999999999988864321 1    111234444  45556666666654434799999999876543

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=93.35  E-value=0.36  Score=35.30  Aligned_cols=63  Identities=17%  Similarity=0.251  Sum_probs=42.2

Q ss_pred             CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-----C---ceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         20 PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----N---VQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~---~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      |.|.||.-+|..|++.|.+|.+++|++ ..+.+.+..-     .   .........++      .....++|++|.+.
T Consensus         5 G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~D~viv~v   75 (151)
T PF02558_consen    5 GAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP------SADAGPYDLVIVAV   75 (151)
T ss_dssp             STSHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH------GHHHSTESEEEE-S
T ss_pred             CcCHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc------hhccCCCcEEEEEe
Confidence            346799999999999999999999999 7777765541     1   11122233333      12224789998886

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=93.32  E-value=0.57  Score=39.49  Aligned_cols=32  Identities=9%  Similarity=-0.043  Sum_probs=25.6

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC-EEEEecCCh
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQ   46 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~   46 (238)
                      .++|.|+ ||+|.++++.|+..|. ++.++++..
T Consensus        26 ~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (339)
T PRK07688         26 HVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY   58 (339)
T ss_pred             cEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence            3444454 7899999999999998 899988753

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.28  E-value=0.18  Score=41.38  Aligned_cols=38  Identities=13%  Similarity=0.009  Sum_probs=29.3

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhH
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANL   49 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~   49 (238)
                      .+.++|.|+++-.|+.++..|.++|++|.++.|....+
T Consensus       159 Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L  196 (283)
T PRK14192        159 GKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNL  196 (283)
T ss_pred             CCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhH
Confidence            34456667777799999999999999999888754433

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=93.24  E-value=0.37  Score=40.88  Aligned_cols=77  Identities=18%  Similarity=0.174  Sum_probs=48.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCC-HHHHHHHHHhcCCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQD-WARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~g~id~li~~   88 (238)
                      ...+++|.| .+++|..++......|+ .|+++++++++.+.+.+ .+--.++..+-.+ .+.+.+.. . +.+|+++.+
T Consensus       186 ~g~~vlI~g-~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~-~g~~~~i~~~~~~~~~~v~~~~-~-~~~d~vld~  261 (365)
T cd08278         186 PGSSIAVFG-AGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKE-LGATHVINPKEEDLVAAIREIT-G-GGVDYALDT  261 (365)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH-cCCcEEecCCCcCHHHHHHHHh-C-CCCcEEEEC
Confidence            346778886 48999999888888999 58888888887765543 3222222211111 23333332 1 358999999


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      .|.
T Consensus       262 ~g~  264 (365)
T cd08278         262 TGV  264 (365)
T ss_pred             CCC
Confidence            873

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=93.23  E-value=0.38  Score=39.98  Aligned_cols=75  Identities=13%  Similarity=0.128  Sum_probs=50.3

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ..+++|.|+++++|..++..+...| ++|+.++++.++.+.+.+ .+--.++  |..+  +..+.+...  +++|.++++
T Consensus       150 g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~-~g~~~~~--~~~~--~~~~~i~~~~~~~~d~vl~~  224 (336)
T cd08252         150 GKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKE-LGADHVI--NHHQ--DLAEQLEALGIEPVDYIFCL  224 (336)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh-cCCcEEE--eCCc--cHHHHHHhhCCCCCCEEEEc
Confidence            5678889999999999999998999 999999988887766643 3321222  2221  111112222  358999988


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      .|.
T Consensus       225 ~~~  227 (336)
T cd08252         225 TDT  227 (336)
T ss_pred             cCc
Confidence            763

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=93.17  E-value=0.12  Score=38.79  Aligned_cols=46  Identities=11%  Similarity=-0.016  Sum_probs=35.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP   57 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   57 (238)
                      +...++|+| +|-.|...++.|...|++|+..+.+.+..++......
T Consensus        19 ~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~   64 (168)
T PF01262_consen   19 PPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGA   64 (168)
T ss_dssp             -T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTT
T ss_pred             CCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccC
Confidence            445667776 6789999999999999999999999988877766543

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=93.10  E-value=0.26  Score=42.34  Aligned_cols=73  Identities=11%  Similarity=0.085  Sum_probs=51.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.++++|+|++ .+|+.+++.+.+.|++|+.++.++.......   .+ ..+..|..|.+.+.+++++. ++|.++...
T Consensus        11 ~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~---ad-~~~~~~~~d~~~l~~~~~~~-~id~vi~~~   83 (395)
T PRK09288         11 SATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQV---AH-RSHVIDMLDGDALRAVIERE-KPDYIVPEI   83 (395)
T ss_pred             CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHHh---hh-heEECCCCCHHHHHHHHHHh-CCCEEEEee
Confidence            34467777764 6899999999999999999988765421111   11 24567888888888887754 478777543

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=93.09  E-value=0.61  Score=36.50  Aligned_cols=30  Identities=17%  Similarity=0.128  Sum_probs=24.0

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-EEEEecCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-IIIALSKT   45 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~   45 (238)
                      ++|.| .||+|..+++.|+..|. ++.+++..
T Consensus        31 V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         31 VGIAG-AGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             EEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            33444 47899999999999998 68888876

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=93.08  E-value=0.37  Score=40.27  Aligned_cols=76  Identities=20%  Similarity=0.161  Sum_probs=46.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ..+++|.| .+++|.+++..+...|. +|+.++++.++.+.+.+. +-..  ..|..+.+..+.+.+..  +.+|+++++
T Consensus       168 ~~~VlI~g-~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~-g~~~--vi~~~~~~~~~~i~~~~~~~~~d~vld~  243 (347)
T cd05278         168 GSTVAVIG-AGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEA-GATD--IINPKNGDIVEQILELTGGRGVDCVIEA  243 (347)
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHh-CCcE--EEcCCcchHHHHHHHHcCCCCCcEEEEc
Confidence            34667765 58999999888888896 788888877766555433 2111  23333332222222222  358999987


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      .|.
T Consensus       244 ~g~  246 (347)
T cd05278         244 VGF  246 (347)
T ss_pred             cCC
Confidence            653

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=93.06  E-value=0.11  Score=41.04  Aligned_cols=136  Identities=19%  Similarity=0.238  Sum_probs=75.1

Q ss_pred             eeeCCCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChH-------------------hHHH----HHhhCCCce
Q psy14567          5 AKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQA-------------------NLDS----LKQAFPNVQ   60 (238)
Q Consensus         5 ~~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~-------------------~~~~----~~~~~~~~~   60 (238)
                      .+|+..++-|++|    ||+|..++..|++.|. ++.+++-..=                   +.+-    +....|..+
T Consensus        26 ekl~~~~V~VvGi----GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~  101 (263)
T COG1179          26 EKLKQAHVCVVGI----GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECE  101 (263)
T ss_pred             HHHhhCcEEEEec----CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCce
Confidence            4667777777777    6899999999999998 7777764321                   1111    111223333


Q ss_pred             EEEe-ecCCHHHHHHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEE
Q psy14567         61 TVQV-DLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVN  139 (238)
Q Consensus        61 ~~~~-D~~~~~~v~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~  139 (238)
                      +... |+-+++.+++++..  .+|++|-+.--                      +..-..++..+    .+.    .+-+
T Consensus       102 V~~~~~f~t~en~~~~~~~--~~DyvIDaiD~----------------------v~~Kv~Li~~c----~~~----ki~v  149 (263)
T COG1179         102 VTAINDFITEENLEDLLSK--GFDYVIDAIDS----------------------VRAKVALIAYC----RRN----KIPV  149 (263)
T ss_pred             EeehHhhhCHhHHHHHhcC--CCCEEEEchhh----------------------hHHHHHHHHHH----HHc----CCCE
Confidence            3322 33444555555443  56777655421                      11122223333    222    2344


Q ss_pred             Eccccc--cccCCCCchhhHHHHHHHHHHHHHHHHhCCC
Q psy14567        140 VSSIAG--KTALEGHTIYSASKAALDSITRTMALELGPY  176 (238)
Q Consensus       140 isS~~~--~~~~~~~~~y~~sK~al~~l~~~l~~~~~~~  176 (238)
                      |||..+  ..-+....--..+|.-.+-|++-++.+|++.
T Consensus       150 Iss~Gag~k~DPTri~v~DiskT~~DPLa~~vR~~LRk~  188 (263)
T COG1179         150 ISSMGAGGKLDPTRIQVADISKTIQDPLAAKVRRKLRKR  188 (263)
T ss_pred             EeeccccCCCCCceEEeeechhhccCcHHHHHHHHHHHh
Confidence            444443  3333334455678888888888888888765

>COG4123 Predicted O-methyltransferase [General function prediction only]

Probab=92.98  E-value=0.35  Score=38.67  Aligned_cols=110  Identities=10%  Similarity=0.206  Sum_probs=65.5

Q ss_pred             CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         20 PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      |+|-+|..++.+...  ++|+.+.+.++..+...+..      .++.++..|+.+.....    ...++|.+|+|..++.
T Consensus        54 G~G~l~L~la~r~~~--a~I~~VEiq~~~a~~A~~nv~ln~l~~ri~v~~~Di~~~~~~~----~~~~fD~Ii~NPPyf~  127 (248)
T COG4123          54 GNGALGLLLAQRTEK--AKIVGVEIQEEAAEMAQRNVALNPLEERIQVIEADIKEFLKAL----VFASFDLIICNPPYFK  127 (248)
T ss_pred             CcCHHHHHHhccCCC--CcEEEEEeCHHHHHHHHHHHHhCcchhceeEehhhHHHhhhcc----cccccCEEEeCCCCCC
Confidence            567788888775543  79999999987655443322      24777777775432211    1136899999999886


Q ss_pred             CCCC-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEc
Q psy14567         94 FDRF-LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS  141 (238)
Q Consensus        94 ~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~is  141 (238)
                      .... .+......-+.+...++...+.....++   + .  +|++.++.
T Consensus       128 ~~~~~~~~~~~~~Ar~e~~~~le~~i~~a~~~l---k-~--~G~l~~V~  170 (248)
T COG4123         128 QGSRLNENPLRAIARHEITLDLEDLIRAAAKLL---K-P--GGRLAFVH  170 (248)
T ss_pred             CccccCcChhhhhhhhhhcCCHHHHHHHHHHHc---c-C--CCEEEEEe
Confidence            5443 2222222234444555665555444443   2 2  57888774

>KOG0409|consensus

Probab=92.97  E-value=0.41  Score=39.22  Aligned_cols=70  Identities=10%  Similarity=0.075  Sum_probs=49.3

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-----------CceEEEeecCCHHHHHH
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----------NVQTVQVDLQDWARTRA   74 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~D~~~~~~v~~   74 (238)
                      +..+.+...++-- |-|-+|.+++..|.+.|++|++.+|+.++.+++.+...           ..+++-+=++++..+++
T Consensus        29 ~~~~~s~~~iGFI-GLG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~Ga~v~~sPaeVae~sDvvitmv~~~~~v~~  107 (327)
T KOG0409|consen   29 SRITPSKTRIGFI-GLGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAGARVANSPAEVAEDSDVVITMVPNPKDVKD  107 (327)
T ss_pred             ccCCcccceeeEE-eeccchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhchhhhCCHHHHHhhcCEEEEEcCChHhhHH
Confidence            3444444444332 34789999999999999999999999999888877663           24444455566666666


Q ss_pred             HH
Q psy14567         75 AV   76 (238)
Q Consensus        75 ~~   76 (238)
                      ++
T Consensus       108 v~  109 (327)
T KOG0409|consen  108 VL  109 (327)
T ss_pred             Hh
Confidence            55

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=92.94  E-value=0.36  Score=40.26  Aligned_cols=76  Identities=17%  Similarity=0.147  Sum_probs=48.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhCCCceEEEeecCCH--HHHHHHHHhcCCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDW--ARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~g~id~li~   87 (238)
                      ...+++|.|+ +++|.+++..+...| .+|+.+.+++++.+.+. +++--..  .|..+.  +.+.++... .++|+++.
T Consensus       167 ~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~--~~~~~~~~~~i~~~~~~-~~~dvvld  241 (340)
T cd05284         167 PGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAE-RLGADHV--LNASDDVVEEVRELTGG-RGADAVID  241 (340)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH-HhCCcEE--EcCCccHHHHHHHHhCC-CCCCEEEE
Confidence            3566788885 559999999988888 79999999888877664 3332112  222222  222222111 25899998


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      +.|.
T Consensus       242 ~~g~  245 (340)
T cd05284         242 FVGS  245 (340)
T ss_pred             cCCC
Confidence            8773

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=92.89  E-value=0.084  Score=44.62  Aligned_cols=32  Identities=19%  Similarity=0.049  Sum_probs=25.1

Q ss_pred             CCCCCCCCchHHHHHHHHhhC-CCEEE-EecCCh
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQH-EAIII-ALSKTQ   46 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~-G~~V~-~~~r~~   46 (238)
                      ++|.||||.+|..+++.|.++ +.+++ ++++++
T Consensus         3 VaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~   36 (346)
T TIGR01850         3 VAIVGASGYTGGELLRLLLNHPEVEITYLVSSRE   36 (346)
T ss_pred             EEEECCCCHHHHHHHHHHHcCCCceEEEEeccch
Confidence            567799999999999999987 56777 435444

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=92.88  E-value=0.35  Score=44.13  Aligned_cols=71  Identities=13%  Similarity=0.054  Sum_probs=53.9

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ++|.| -|.+|+.+++.|.++|..+++++.++++.+++++.  +...+..|.++++.++++  .+.+-|.+|.+.+
T Consensus       403 vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~--g~~v~~GDat~~~~L~~a--gi~~A~~vv~~~~  473 (601)
T PRK03659        403 VIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRKY--GYKVYYGDATQLELLRAA--GAEKAEAIVITCN  473 (601)
T ss_pred             EEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhC--CCeEEEeeCCCHHHHHhc--CCccCCEEEEEeC
Confidence            44444 46799999999999999999999999999888764  567899999998866554  1124566665543

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=92.84  E-value=0.12  Score=43.53  Aligned_cols=34  Identities=9%  Similarity=0.130  Sum_probs=25.1

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCE---EEEecCChHh
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAI---IIALSKTQAN   48 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~---V~~~~r~~~~   48 (238)
                      ++|.||||.+|..+++.|.+++..   +..+.++++.
T Consensus         2 VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~   38 (339)
T TIGR01296         2 VAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSA   38 (339)
T ss_pred             EEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccC
Confidence            467899999999999999987653   3444455443

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=92.83  E-value=0.25  Score=40.83  Aligned_cols=108  Identities=16%  Similarity=0.228  Sum_probs=59.4

Q ss_pred             CCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHH----HhhCCCc-eEEEeec-CCHHHHHHHHHhcCCccEEEEc
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSL----KQAFPNV-QTVQVDL-QDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~----~~~~~~~-~~~~~D~-~~~~~v~~~~~~~g~id~li~~   88 (238)
                      .|.|+ |.+|..++..|+..|. +|++++++++.++..    ....... ....... +|.+   +    +..-|++|.+
T Consensus         2 ~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I~~t~d~~---~----l~dADiVIit   73 (300)
T cd01339           2 SIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKVTGTNDYE---D----IAGSDVVVIT   73 (300)
T ss_pred             EEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEEEEcCCHH---H----hCCCCEEEEe
Confidence            45677 8899999999998875 999999987653321    1111000 0011111 2222   1    2346999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      +|.....   +.+..+    .+.-|    +-+.+.+.+.+.+..+++.++++|.
T Consensus        74 ~g~p~~~---~~~r~e----~~~~n----~~i~~~i~~~i~~~~p~~~iIv~sN  116 (300)
T cd01339          74 AGIPRKP---GMSRDD----LLGTN----AKIVKEVAENIKKYAPNAIVIVVTN  116 (300)
T ss_pred             cCCCCCc---CCCHHH----HHHHH----HHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9975321   222221    22333    3455556666655544566666664

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	238
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		5e-52
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		8e-52
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		7e-51
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		1e-39
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		4e-25
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		2e-19
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		2e-18
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		8e-18
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		2e-17
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		3e-17
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		4e-17
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-17
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-17
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-16
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		1e-16
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		1e-16
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		2e-16
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-16
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		4e-16
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-16
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		6e-16
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		6e-16
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		6e-16
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		1e-15
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-15
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		2e-15
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		3e-15
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		4e-15
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		4e-15
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		5e-15
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		6e-15
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		7e-15
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		8e-15
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		9e-15
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		1e-14
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		2e-14
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		2e-14
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		2e-14
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		3e-14
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		4e-14
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		6e-14
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		6e-14
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		6e-14
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		7e-14
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		7e-14
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-14
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-13
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		1e-13
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		2e-13
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-13
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		3e-13
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		4e-13
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		5e-13
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		6e-13
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		6e-13
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		7e-13
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		7e-13
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		7e-13
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		7e-13
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		8e-13
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		2e-12
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		2e-12
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		2e-12
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		3e-12
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		3e-12
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		4e-12
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		4e-12
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		5e-12
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		6e-12
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		6e-12
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		8e-12
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		8e-12
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		9e-12
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		1e-11
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		1e-11
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-11
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		2e-11
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		2e-11
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-11
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-11
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		3e-11
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		3e-11
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		3e-07
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		3e-11
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		4e-11
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		4e-11
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-11
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		4e-11
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		5e-11
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		5e-11
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		6e-11
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		6e-11
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		7e-11
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		7e-11
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		8e-11
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		8e-11
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		9e-11
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		1e-10
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		1e-10
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		1e-10
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		2e-10
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		2e-10
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		2e-10
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		3e-10
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		3e-10
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		4e-10
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		4e-10
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		5e-10
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		5e-10
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		6e-10
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		7e-10
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		8e-10
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		8e-10
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		9e-10
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		1e-09
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-09
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		1e-09
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-09
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		1e-09
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		1e-09
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		1e-09
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		2e-09
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		2e-09
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		2e-09
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		2e-09
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		2e-09
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		3e-09
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		3e-09
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		3e-09
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		3e-09
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		3e-09
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		3e-09
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		4e-09
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-09
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		4e-09
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		4e-09
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		5e-09
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		6e-09
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		6e-09
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		7e-09
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		8e-09
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		8e-09
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-08
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		1e-08
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		1e-08
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-08
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		2e-08
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		2e-08
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		2e-08
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		2e-08
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		2e-08
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		3e-08
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		3e-08
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		4e-08
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		4e-08
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		4e-08
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		4e-08
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		4e-08
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		5e-08
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		6e-08
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		6e-08
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		6e-08
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		8e-08
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		8e-08
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		9e-08
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		9e-08
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		1e-07
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		1e-07
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		1e-07
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		1e-07
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		1e-07
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		2e-07
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-07
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		3e-07
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		3e-07
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		3e-07
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		3e-07
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		4e-07
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		4e-07
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		4e-07
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		4e-07
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		5e-07
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		7e-07
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		1e-06
4all_A	277	Crystal Structure Of S. Aureus Fabi In Complex With		1e-06
4fs3_A	256	Crystal Structure Of Staphylococcus Aureus Enoyl-Ac		1e-06
4ali_A	282	Crystal Structure Of S. Aureus Fabi In Complex With		1e-06
3gns_A	260	Crystal Structure Of The Staphylococcus Aureus Enoy		1e-06
3gnt_A	256	Crystal Structure Of The Staphylococcus Aureus Enoy		2e-06
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-06
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		2e-06
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		2e-06
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		5e-06
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-06
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		6e-06
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		6e-06
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		6e-06
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		7e-06
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		8e-06
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		9e-06
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		9e-06
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		9e-06
3e9n_A	245	Crystal Structure Of A Putative Short-Chain Dehydro		1e-05
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		1e-05
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		1e-05
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		1e-05
1z6z_A	282	Crystal Structure Of Human Sepiapterin Reductase In		1e-05
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		1e-05
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		1e-05
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		1e-05
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		2e-05
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-05
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		2e-05
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		2e-05
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		3e-05
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		3e-05
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		4e-05
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		4e-05
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		4e-05
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		4e-05
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		4e-05
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		7e-05
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		8e-05
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		9e-05
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		9e-05
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		1e-04
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		1e-04
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-04
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-04
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		1e-04
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		1e-04
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		1e-04
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		2e-04
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		3e-04
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		5e-04
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		6e-04
1nas_A	259	Sepiapterin Reductase Complexed With N-acetyl Serot		7e-04
1pwx_A	254	Crystal Structure Of The Haloalcohol Dehalogenase H		7e-04
1sep_A	261	Mouse Sepiapterin Reductase Complexed With Nadp And		7e-04
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		8e-04
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		9e-04

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score =  200 bits (509), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 99/194 (51%), Positives = 137/194 (70%), Gaps = 1/194 (0%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V+ L    A ++A+S+TQA+LDSL +  P ++ V VDL DW  T  A+  VGPV
Sbjct: 18  GIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPV 77
Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAAVA    FL++ +E   D  F+VN++AVI +SQ+V++ +I   + G+IVNVSS
Sbjct: 78  DLLVNNAAVALLQPFLEVTKEAF-DRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS 136
Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
              + A+  H++Y ++K ALD +T+ MALELGP+ IRVN+V PTVVMT MG+  WSDP K
Sbjct: 137 QCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK 196
Query: 203 AGPMLAKTPLGRFA 216
           A  ML + PLG+FA
Sbjct: 197 AKTMLNRIPLGKFA 210

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score =  199 bits (507), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 99/194 (51%), Positives = 137/194 (70%), Gaps = 1/194 (0%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V+ L    A ++A+S+TQA+LDSL +  P ++ V VDL DW  T  A+  VGPV
Sbjct: 18  GIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPV 77
Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAAVA    FL++ +E   D  F+VN++AVI +SQ+V++ +I   + G+IVNVSS
Sbjct: 78  DLLVNNAAVALLQPFLEVTKEAF-DRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS 136
Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
              + A+  H++Y ++K ALD +T+ MALELGP+ IRVN+V PTVVMT MG+  WSDP K
Sbjct: 137 QXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK 196
Query: 203 AGPMLAKTPLGRFA 216
           A  ML + PLG+FA
Sbjct: 197 AKTMLNRIPLGKFA 210

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score =  159 bits (403), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 82/194 (42%), Positives = 124/194 (63%), Gaps = 1/194 (0%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V+ L    A ++A+++T ++L SL +  P ++ V VDL DW  T  A+  +GPV
Sbjct: 18  GIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPV 77
Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAA+     FL++ +E   D  F VN+++V  +SQ+V++ MI+  + GSIVNVSS
Sbjct: 78  DLLVNNAALVIMQPFLEVTKEAF-DRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS 136
Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
           +           YS++K A+  +T+ MA+ELGP+ IRVNSV PTVV+T MG+   +DP  
Sbjct: 137 MVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEF 196
Query: 203 AGPMLAKTPLGRFA 216
           A  +  + PL +FA
Sbjct: 197 ARKLKERHPLRKFA 210

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 110/203 (54%), Gaps = 10/203 (4%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQD----WARTR 73
           GIG  I    +   A ++   +  + LD+ ++A       +V TV +DL +        R
Sbjct: 31  GIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELAR 90
Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            A    G +DVL+NNA ++     +D D + L D+   VN++A   ++  V K M+    
Sbjct: 91  RAAEAFGGLDVLVNNAGISHPQPVVDTDPQ-LFDATIAVNLRAPALLASAVGKAMVAAGE 149
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G+I+ V+S A    L  H  Y  SKA L   T+ +A ELGP+ IR NSV PTVV+T+MG
Sbjct: 150 GGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMG 209
Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
           +  W D AK+ PM+A+ PLGRFA
Sbjct: 210 QRVWGDEAKSAPMIARIPLGRFA 232

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/196 (34%), Positives = 104/196 (53%), Gaps = 17/196 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDL----------QDWART 72
           GIG  I  +L+Q  A ++  S+ Q N+D   QA   +Q   + +          +D  R 
Sbjct: 26  GIGFAIARRLAQDGAHVVVSSRKQQNVD---QAVATLQGEGLSVTGTVCHVGKAEDRERL 82
Query: 73  RAAVSKV-GPVDVLINNAAV-ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
            A   K+ G +D+L++NAAV   F   +D+ EE + D   D+N+KA   +++ V   M +
Sbjct: 83  VATAVKLHGGIDILVSNAAVNPFFGSIMDVTEE-VWDKTLDINVKAPALMTKAVVPEM-E 140
Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            +  GS+V VSSIA  +   G + Y+ SK AL  +T+T+A+EL P NIRVN + P ++ T
Sbjct: 141 KRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKT 200
Query: 191 QMGRTGWSDPAKAGPM 206
              R  W D  K   M
Sbjct: 201 SFSRMLWMDKEKEESM 216

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 9/200 (4%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           GIGR I E L+   A +I  + ++    ++      N + + +++ D A   + + K+  
Sbjct: 16  GIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRA 75
Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G VD+L+NNA + R +  + + +E   D I + N+ +V  +S+ V + M+  +  G I
Sbjct: 76  EFGEVDILVNNAGITRDNLLMRMKDEEWND-IIETNLSSVFRLSKAVMRAMMKKR-HGRI 133
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           + + S+ G     G   Y+A+KA L   ++++A E+    I VN V P  + T M R   
Sbjct: 134 ITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA-L 192
Query: 198 SDPAKAGPMLAKTPLGRFAG 217
           SD  +AG +LA+ P GR  G
Sbjct: 193 SDDQRAG-ILAQVPAGRLGG 211

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 87.0 bits (214), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 9/200 (4%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           GIGR I E L+   A +I  + ++    ++      N + + +++ D A   + + K+  
Sbjct: 16  GIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRA 75
Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G VD+L+NNA + R +  + + +E   D I + N+ +V  +S+ V + M+  +  G I
Sbjct: 76  EFGEVDILVNNAGITRDNLLMRMKDEEWND-IIETNLSSVFRLSKAVMRAMMKKR-HGRI 133
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           + + S+ G     G   ++A+KA L   ++++A E+    I VN V P  + T M R   
Sbjct: 134 ITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA-L 192
Query: 198 SDPAKAGPMLAKTPLGRFAG 217
           SD  +AG +LA+ P GR  G
Sbjct: 193 SDDQRAG-ILAQVPAGRLGG 211

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 23  GIGRCIVEKLSQHE---AIIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRA--- 74
           GIGR I  +L++     A+  A SK +A   ++ +K    +   +Q ++ D    +A   
Sbjct: 21  GIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIK 80
Query: 75  -AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
             VS+ G +DVL+NNA + R +  + + E+   D + D N+K V N  Q  +  M+  + 
Sbjct: 81  EVVSQFGSLDVLVNNAGITRDNLLMRMKEQEW-DDVIDTNLKGVFNCIQKATPQMLRQR- 138
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G+I+N+SS+ G     G   Y A+KA +  +T++ A EL    I VN+V P  +++ M 
Sbjct: 139 SGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDM- 197
Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
               SD  K   ML + PL RF
Sbjct: 198 TDALSDELKE-QMLTQIPLARF 218

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 16/209 (7%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL----KQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG  IVE+L+   A +   S+ +  LD      ++   NV+    DL         +  
Sbjct: 32  GIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQT 91
Query: 79  V-----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           V     G +++L+NNA V       D  E++  + I   N +A  ++SQ+ +  ++    
Sbjct: 92  VAHVFDGKLNILVNNAGVVIHKEAKDFTEKDY-NIIMGTNFEAAYHLSQI-AYPLLKASQ 149
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G+++ +SSIAG +AL   ++YSASK A++ +T+++A E    NIRVNSV P V++T + 
Sbjct: 150 NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLV 209
Query: 194 RTGW-SDPAKAGPM---LAKTPLGRFAGK 218
            T    +P +   +   + KTP+GR AGK
Sbjct: 210 ETAIKKNPHQKEEIDNFIVKTPMGR-AGK 237

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 8/174 (4%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG  I  + S+    ++ L++    L +L    PN    QVD+ D      A+++    
Sbjct: 27  GIGEAIARRFSEEGHPLLLLARRVERLKALN--LPNTLCAQVDVTDKYTFDTAITRAEKI 84
Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            GP D ++NNA +    + +D  E N    +FDVN+  ++N  Q V   M      G+I+
Sbjct: 85  YGPADAIVNNAGMMLLGQ-IDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNC-GTII 142
Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           N+SSIAGK     H  Y  +K A+ +I+  +  E+   N+RV ++ P+ V T++
Sbjct: 143 NISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTEL 196

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 104/199 (52%), Gaps = 9/199 (4%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQD----WARTRAAVS 77
           GIG+ I E L++  A +I  + +++   ++      N + + +++ +     A  +A   
Sbjct: 23  GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITD 82
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           + G VD+L+NNAA+ R +  + + EE   D I + N+ ++  +S+ V + M+  + QG I
Sbjct: 83  EFGGVDILVNNAAITRDNLLMRMKEEEWSD-IMETNLTSIFRLSKAVLRGMMKKR-QGRI 140
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           +NV S+ G     G   Y+A+KA +   T++MA E+    + VN+V P  + T M +   
Sbjct: 141 INVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA-L 199
Query: 198 SDPAKAGPMLAKTPLGRFA 216
           +D  +    LA+ P GR  
Sbjct: 200 NDEQRT-ATLAQVPAGRLG 217

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 84.0 bits (206), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 105/202 (51%), Gaps = 12/202 (5%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNV----QTVQVDLQDW----ARTRA 74
           GIGR I  +L++  A++I  + T+A  + +  AF       +   +++ D     A   +
Sbjct: 39  GIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVES 98
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
            + + G ++VL+NNA + + D+     +++  D++ D N+KAV  +S+ V + M+  +  
Sbjct: 99  TLKEFGALNVLVNNAGITQ-DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-G 156
Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G IVN++S+ G     G   Y+A+KA +  +TR +A E+G   I VN V P  + T M +
Sbjct: 157 GRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK 216
Query: 195 TGWSDPAKAGPMLAKTPLGRFA 216
               +   A  +  + PLGR  
Sbjct: 217 GLPQEQQTA--LKTQIPLGRLG 236

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQD----WARTRAAVS 77
           GIG+ I E L++  A +I  + +++   ++      N + + +++ +     A  +A   
Sbjct: 23  GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITD 82
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           + G VD+L+NNA + R +  + + EE   D I + N+ ++  +S+ V + M+  K QG I
Sbjct: 83  EFGGVDILVNNAGITRDNLLMRMKEEEWSD-IMETNLTSIFRLSKAVLRGMM-KKRQGRI 140
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           +NV S+ G     G   Y+A+KA +   T++MA E+    + VN+V P  + T M +   
Sbjct: 141 INVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGAIETDMTKA-L 199
Query: 198 SDPAKAGPMLAKTPLGRFA 216
           +D  +    LA+ P GR  
Sbjct: 200 NDEQRT-ATLAQVPAGRLG 217

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQD----WARTRAAVS 77
           GIG+ I E L++  A +I  + +++   ++      N + + +++ +     A  +A   
Sbjct: 23  GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITD 82
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           + G VD+L+NNA + R +  + + EE   D I + N+ ++  +S+ V + M+  + QG I
Sbjct: 83  EFGGVDILVNNAGITRDNLLMRMKEEEWSD-IMETNLTSIFRLSKAVLRGMMKKR-QGRI 140
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           +NV S+ G     G   Y+A+KA +   T++MA E+    + VN+V P  + T M +   
Sbjct: 141 INVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA-L 199
Query: 198 SDPAKAGPMLAKTPLGRFA 216
           +D  +    LA+ P GR  
Sbjct: 200 NDEQRT-ATLAQVPAGRLG 217

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 10/178 (5%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIGR I + L++  + +I +S+TQ + DS+     +              +  +S+V   
Sbjct: 55  GIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK 114
Query: 80  -----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                  VD+L+NNA + R + FL +  +   D +   N+ ++  I+Q +SK MI+++  
Sbjct: 115 ILTEHKNVDILVNNAGITRDNLFLRMKNDEWED-VLRTNLNSLFYITQPISKRMINNR-Y 172
Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           G I+N+SSI G T   G   YS+SKA +   T+++A EL   NI VN++ P  + + M
Sbjct: 173 GRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDM 230

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 97/174 (55%), Gaps = 10/174 (5%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDW-ARTR---AAVSK 78
           GIGR I +  ++ E  ++AL   +     + +A       QVDL+D   R R    A   
Sbjct: 17  GIGRAIAQAFAR-EGALVALCDLRPEGKEVAEAIGGA-FFQVDLEDERERVRFVEEAAYA 74
Query: 79  VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG-SI 137
           +G VDVL+NNAA+A     L +        + +VN+ A +++S + ++ M   K+ G +I
Sbjct: 75  LGRVDVLVNNAAIAAPGSALTVRLPEW-RRVLEVNLTAPMHLSALAAREM--RKVGGGAI 131
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
           VNV+S+ G  A + +  Y+ASK  L ++TR++AL+L P  IRVN+V P  + T+
Sbjct: 132 VNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATE 185

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQD----WARTRAAVS 77
           GIG+ I E L++  A +I  + +++   ++      N + + +++ +     A  +A   
Sbjct: 23  GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITD 82
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           + G VD+L+NNA + R +  + + EE   D I + N+ ++  +S+ V + M+  K QG I
Sbjct: 83  EFGGVDILVNNADITRDNLLMRMKEEEWSD-IMETNLTSIFRLSKAVLRGMM-KKRQGRI 140
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           +NV S+ G     G   Y+A+KA +   T++MA E+    + VN+V P  + T M +   
Sbjct: 141 INVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA-L 199
Query: 198 SDPAKAGPMLAKTPLGRFA 216
           +D  +    LA+ P GR  
Sbjct: 200 NDEQRT-ATLAQVPAGRLG 217

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 19/206 (9%)
Query: 23  GIGRCIVEKLSQHEAIII-----ALSKTQANLDSLKQAFPNVQTVQVDLQD----WARTR 73
           G+G+ I  KL    A I+     A +   A  +  K A  NV   + D+++        +
Sbjct: 16  GLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVK 75
Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            A+   G +D+L+NNA + R    L + E++  D + + N+K+    ++ VSK M+  K 
Sbjct: 76  TAMDAFGRIDILVNNAGITRDTLMLKMSEKDW-DDVLNTNLKSAYLCTKAVSKIMLKQK- 133
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N++SIAG     G   Y+ASKA L   T+++A E     I  N+V P ++ T M 
Sbjct: 134 SGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDM- 192
Query: 194 RTGWSD--PAKAGPM-LAKTPLGRFA 216
               +D  P K   M L   PL RF 
Sbjct: 193 ----TDVLPDKVKEMYLNNIPLKRFG 214

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 103/199 (51%), Gaps = 9/199 (4%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQD----WARTRAAVS 77
           GIG+ I E L++  A +I  + +++   ++      N + + +++ +     A  +A   
Sbjct: 23  GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITD 82
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           + G VD+L+NNA + R +  + + EE   D I + N+ ++  +S+ V + M+  K QG I
Sbjct: 83  EFGGVDILVNNAGITRDNLLMRMKEEEWSD-IMETNLTSIFRLSKAVLRGMM-KKRQGRI 140
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           +NV S+ G     G   ++A+KA +   T++MA E+    + VN+V P  + T M +   
Sbjct: 141 INVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA-L 199
Query: 198 SDPAKAGPMLAKTPLGRFA 216
           +D  +    LA+ P GR  
Sbjct: 200 NDEQRT-ATLAQVPAGRLG 217

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD----SLKQAFPNVQTVQVDL---QDWARTRA- 74
           GIG  I  +L+Q  A ++  S+ Q N+D    +L+    +V      +   +D  R  A 
Sbjct: 25  GIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAM 84
Query: 75  AVSKVGPVDVLINNAAV-ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           AV+  G VD+L++NAAV   F   +D  EE + D I  VN+KA + +++ V   M + + 
Sbjct: 85  AVNLHGGVDILVSNAAVNPFFGNIIDATEE-VWDKILHVNVKATVLMTKAVVPEM-EKRG 142
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            GS++ VSS+           Y+ SK AL  +T+ +A+EL P NIRVN + P ++ T   
Sbjct: 143 GGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFS 202
Query: 194 RTGWSDPAK 202
           +  W D A+
Sbjct: 203 QVLWMDKAR 211

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/193 (32%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWART--- 72
           GIGR      ++  A +    + +  L+  KQ           +  V  D+ + +     
Sbjct: 37  GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDI 96
Query: 73  -RAAVSKVGPVDVLINNAAVARFDRFLDIDEE-NLIDSIFDVNIKAVINISQVVSKTMID 130
               ++K G +D+L+NNA     D   + D+   L    F +N +AVI ++Q   + +I 
Sbjct: 97  INTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLI- 155
Query: 131 HKIQGSIVNVSSI-AGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
            K +G IVNVSSI AG  A  G+  Y+ +KAALD  TR  A++L  + +RVNSV P  V 
Sbjct: 156 -KTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVA 214
Query: 190 TQ-MGRTGWSDPA 201
           T  MG  G  + A
Sbjct: 215 TGFMGAMGLPETA 227

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWA----RTR 73
           GIGR I   L++  A ++   A ++ +AN  +D +K+   +   V+ D+ +        +
Sbjct: 15  GIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVK 74
Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
             V   G VD+L+NNA V + +  + + EE   D++ + N+K V   ++ VS+ M+  + 
Sbjct: 75  QTVDVFGQVDILVNNAGVTKDNLLMRMKEEEW-DTVINTNLKGVFLCTKAVSRFMMRQR- 132
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN++S+ G T   G   Y A+KA +  +T+T A EL   NI VN++ P  + T M 
Sbjct: 133 HGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDM- 191
Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
            T   D      ML   P  +F
Sbjct: 192 -TDVLDENIKAEMLKLIPAAQF 212

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 17/186 (9%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL---------KQAFP--NVQTVQVDLQDWAR 71
           GIGR +  +L+   A + A    +A              K+  P  N    Q D+ +   
Sbjct: 18  GIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARA 77
Query: 72  TRAAVSKVG-----PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSK 126
            R  + +V      P  V+++ A + + +  L + E++  D +  VN+K    ++Q  ++
Sbjct: 78  ARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDW-DKVIAVNLKGTFLVTQAAAQ 136
Query: 127 TMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 186
            ++ +  +GSI+N+SSI GK    G T Y+ASKA +  +T+T A ELG + IR NSV P 
Sbjct: 137 ALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPG 196
Query: 187 VVMTQM 192
            + T M
Sbjct: 197 FIATPM 202

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Query: 23  GIGRCIVEKLSQHE---AIIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAA-- 75
           GIGR I  +L++     A+  A SK +A   ++ +K    +   +Q ++ D    +A   
Sbjct: 15  GIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAXIK 74
Query: 76  --VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
             VS+ G +DVL+NNA + R D  L   +E   D + D N+K V N  Q  +   +  + 
Sbjct: 75  EVVSQFGSLDVLVNNAGITR-DNLLXRXKEQEWDDVIDTNLKGVFNCIQKATPQXLRQR- 132
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G+I+N+SS+ G     G   Y A+KA +  +T++ A EL    I VN+V P  +++   
Sbjct: 133 SGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDX- 191
Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
               SD  K    L + PL RF
Sbjct: 192 TDALSDELKE-QXLTQIPLARF 212

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN-VQTVQVDLQDWARTRAAVSKV-- 79
           G GR I E        +I  ++    LD L  A+P+  + + +D+ D  R     + V  
Sbjct: 16  GFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLA 75
Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G VDVL+NNA   +   F +  E  L D +F++++     +++ +       +  GS+
Sbjct: 76  RYGRVDVLVNNAGRTQVGAFEETTERELRD-LFELHVFGPARLTRAL-LPQXRERGSGSV 133
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           VN+SS  G+ +  G + YSA+KAAL+ ++  +A E+ P+ I+V  V+P    T +   G 
Sbjct: 134 VNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGA 193
Query: 198 SDPAKAGPMLAK 209
           +  ++  P  A+
Sbjct: 194 AYFSEENPAYAE 205

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Query: 64  VDLQDWARTRAAVS----KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVIN 119
           +D++D A  R  V+    + G +DV++ NA V  + R  ++ +E   D++  VN+     
Sbjct: 84  LDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQW-DTVIGVNLTGTWR 142
Query: 120 ISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIR 179
             +     MI+    GSIV VSS AG  A  G+  YSASK  L ++T T+A+ELG Y IR
Sbjct: 143 TLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIR 202
Query: 180 VNSVQPTVVMTQM 192
           VNS+ P  V T M
Sbjct: 203 VNSIHPYSVETPM 215

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN-----VQTVQVDLQDWARTRAAVS 77
           GIGR I EKL+   + +I    +     ++ +   N        V+++L        A  
Sbjct: 18  GIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFE 77
Query: 78  K----VGPVDVLINNAAVARFDRFLDIDEENLID--SIFDVNIKAVINISQVVSKTMIDH 131
           +    V  +D+L+NNA + R   FL +   +L+D   +  VN+     ++Q   + MI  
Sbjct: 78  EIYNLVDGIDILVNNAGITRDKLFLRM---SLLDWEEVLKVNLTGTFLVTQNSLRKMIKQ 134
Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
           +  G IVN+SS+ G T   G   YS +KA L   T+++A EL P N+ VN+V P  + T 
Sbjct: 135 R-WGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETD 193
Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFA 216
           M     S+  K      + PLGRF 
Sbjct: 194 MTAV-LSEEIKQ-KYKEQIPLGRFG 216

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 77.8 bits (190), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 13/190 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANL-DSLKQ----AFPNVQTVQVDLQDWARTRAAVS 77
           GIG  IVE+L+   A +   S+ Q  L D L Q     F  V+    DL   +  +  ++
Sbjct: 20  GIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK-VEASVCDLSSRSERQELMN 78
Query: 78  KV-----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            V     G +++L+NNA +  +    D   E+    I  +N +A  ++S V++   +   
Sbjct: 79  TVANHFHGKLNILVNNAGIVIYKEAKDYTVEDY-SLIMSINFEAAYHLS-VLAHPFLKAS 136
Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            +G++V +SS++G  A+    +Y A+K A+D +TR +A E    NIRVN V P V+ T +
Sbjct: 137 ERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL 196
Query: 193 GRTGWSDPAK 202
                 DP +
Sbjct: 197 VEMTIQDPEQ 206

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 13/190 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANL-DSLKQ----AFPNVQTVQVDLQDWARTRAAVS 77
           GIG  IVE+L+   A +   S+ Q  L D L Q     F  V+    DL   +  +  ++
Sbjct: 19  GIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK-VEASVCDLSSRSERQELMN 77
Query: 78  KV-----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            V     G +++L+NNA +  +    D   E+    I  +N +A  ++S V++   +   
Sbjct: 78  TVANHFHGKLNILVNNAGIVIYKEAKDYTVEDY-SLIMSINFEAAYHLS-VLAHPFLKAS 135
Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            +G++V +SS++G  A+    +Y A+K A+D +TR +A E    NIRVN V P V+ T +
Sbjct: 136 ERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSL 195
Query: 193 GRTGWSDPAK 202
                 DP +
Sbjct: 196 VEMTIQDPEQ 205

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 9/199 (4%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRA----AVS 77
           G+G  I   L    AI+      +  L  L       +     +L D    +A    A  
Sbjct: 21  GLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSDREAVKALGQKAEE 80
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           ++G VD+L+NNA + R   F+ + +E+  D++  VN+ +V N+++ ++  M+  +  G I
Sbjct: 81  EMGGVDILVNNAGITRDGLFVRMSDEDW-DAVLTVNLTSVFNLTRELTHPMMRRR-NGRI 138
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           +N++SI G T   G   Y ASKA L   ++++A E+   N+ VN + P  + + M  TG 
Sbjct: 139 INITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESAM--TGK 196
Query: 198 SDPAKAGPMLAKTPLGRFA 216
            +  +   ++   P+ R  
Sbjct: 197 LNEKQKDAIMGNIPMKRMG 215

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQAN------LDSLKQAFPNVQTVQVDLQDWARTRAA 75
           G+G  I  +L  H+A + +A+S ++ N      L   + A  + +   VD+ D+      
Sbjct: 36  GLGAAISRRL--HDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERC 93
Query: 76  VSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
             KV    G VDVLINNA + R   F+ + + +  D++   ++ A+ N+++     M++ 
Sbjct: 94  AEKVLADFGKVDVLINNAGITRDATFMKMTKGDW-DAVMRTDLDAMFNVTKQFIAGMVER 152
Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
           +  G IVN+ S+ G     G   Y+++KA +   T+T+ALE     I VN+V P  + T 
Sbjct: 153 RF-GRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATA 211
Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFA 216
           M      D  +A  +L + P+GR  
Sbjct: 212 MVEAVPQDVLEA-KILPQIPVGRLG 235

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 9/199 (4%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRA----AVS 77
           G+G  I   L    AI+      +  L  L       +     +L D    +A    A  
Sbjct: 18  GLGEAIARALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSDREAVKALGQKAEE 77
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           ++G VD+L+NNA + R   F+ + +E+  D++  VN+ +V N+++ ++  M+  +  G I
Sbjct: 78  EMGGVDILVNNAGITRDGLFVRMSDEDW-DAVLTVNLTSVFNLTRELTHPMMRRR-NGRI 135
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           +N++SI G T   G   Y ASKA L   ++++A E+   N+ VN + P  + + M  TG 
Sbjct: 136 INITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESAM--TGK 193
Query: 198 SDPAKAGPMLAKTPLGRFA 216
            +  +   ++   P+ R  
Sbjct: 194 LNEKQKDAIMGNIPMKRMG 212

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 62  VQVDLQDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAV 117
           V+ D+ D  +   A  ++    GPV+VLI NA V +    + + EE+   S+ + N+   
Sbjct: 64  VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFT-SVVETNLTGT 122
Query: 118 INISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYN 177
             + +  ++ M+  K +G +V +SS+ G     G   Y+ASKA L    R++A ELG  N
Sbjct: 123 FRVVKRANRAMLRAK-KGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRN 181
Query: 178 IRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 216
           I  N V P  V T M +   +D  +A  ++++ PLGR+A
Sbjct: 182 ITFNVVAPGFVDTDMTKV-LTDEQRAN-IVSQVPLGRYA 218

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 12/203 (5%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL-----KQAFPNVQTV-QVDLQ-DWARTRAA 75
           GIG  IVE+ +   A+I   ++ +  L+       K+ F    +V    L+ +  +    
Sbjct: 25  GIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQT 84
Query: 76  VSKV--GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           VS +  G +D+LINN    R    LD   E+    I   N+++  ++SQ+ +  ++    
Sbjct: 85  VSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHI-STNLESAYHLSQL-AHPLLKASG 142
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G+I+ +SSIAG  +    +IYSA+K AL+ + R +A E     IR N+V P V+ T + 
Sbjct: 143 CGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLA 202
Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
              + D  K   ++++ PLGRF 
Sbjct: 203 EAVYDDEFKK-VVISRKPLGRFG 224

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 23  GIGRCIVEKLSQ-------HEAIIIALSKTQANLDSL----KQAFPNVQTVQVDLQDWAR 71
           GIGR I  + ++        E +++  S+T A+L+ +    +       T+  D+ D A 
Sbjct: 13  GIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMAD 72
Query: 72  TR----AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT 127
            R      V + G +D L+NNA V RF    D+ EE+  D   + N+K    ++Q +   
Sbjct: 73  VRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDF-DYTMNTNLKGTFFLTQALFAL 131
Query: 128 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
           M + +  G I  ++S+A   A    +IY  SK     +  TM L     N+R+  VQP  
Sbjct: 132 M-ERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGA 190
Query: 188 VMTQM 192
           V T M
Sbjct: 191 VYTPM 195

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 10/187 (5%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTR----AAVS 77
           G G   V +L +  A ++   + ++N+  +++ F P V  ++ D+ D         AA  
Sbjct: 19  GXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQ 78
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
            +G +D+L  NA V+  + F  + E +  D  F VN K      Q ++  +   +  GSI
Sbjct: 79  TLGAIDLLHINAGVSELEPFDQVSEASY-DRQFAVNTKGAFFTVQRLTPLI---REGGSI 134
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT-QMGRTG 196
           V  SS+A +    G ++YSASKAAL S    +A EL P  IRVNSV P  + T   G  G
Sbjct: 135 VFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAG 194
Query: 197 WSDPAKA 203
            ++  +A
Sbjct: 195 ITEAERA 201

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 10/187 (5%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTR----AAVS 77
           G G   V +L +  A ++   + ++N+  +++ F P V  ++ D+ D         AA  
Sbjct: 18  GXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQ 77
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
            +G +D+L  NA V+  + F  + E +  D  F VN K      Q ++  +   +  GSI
Sbjct: 78  TLGAIDLLHINAGVSELEPFDQVSEASY-DRQFAVNTKGAFFTVQRLTPLI---REGGSI 133
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT-QMGRTG 196
           V  SS+A +    G ++YSASKAAL S    +A EL P  IRVNSV P  + T   G  G
Sbjct: 134 VFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAG 193
Query: 197 WSDPAKA 203
            ++  +A
Sbjct: 194 ITEAERA 200

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 7/142 (4%)
Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           A + + G +DVL+NNA + R    L +  ++   S+ D+N+  V   S+  +K M+  + 
Sbjct: 99  AVIERWGRLDVLVNNAGITRDTLLLRMKRDDW-QSVLDLNLGGVFLCSRAAAKIMLKQR- 156
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N++S+ G+    G   YSA+KA +  +T+T+A EL    I VN+V P  + T M 
Sbjct: 157 SGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDM- 215
Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
               +    A  +L   PLGR+
Sbjct: 216 ----TSELAAEKLLEVIPLGRY 233

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 6/171 (3%)
Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-- 79
           GIGR   E   +  A + IA    +A   +  +  P    + +D+ D A     V+++  
Sbjct: 16  GIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLD 75
Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G +D+L+NNAA+      ++I  E+  D +F +N+   + + Q V++ MI     G I
Sbjct: 76  RWGSIDILVNNAALFDLAPIVEITRESY-DRLFAINVSGTLFMMQAVARAMIAGGRGGKI 134
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
           +N++S AG+       +Y A+KAA+ S+T++  L L  + I VN++ P VV
Sbjct: 135 INMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVV 185

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 63  QVDLQDWARTRAAV----SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVI 118
           QVD++D+   +AAV    +++G +D+++ NAA+A     L+  +      + DVN+    
Sbjct: 95  QVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAW 154
Query: 119 NISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNI 178
             ++V    ++  K  GSIV  SSI G    E    Y ASK  L  + RTMALELGP NI
Sbjct: 155 ITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNI 214
Query: 179 RVNSVQPTVVMTQM 192
           RVN V P+ V T M
Sbjct: 215 RVNIVCPSSVATPM 228

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 73.9 bits (180), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 24/200 (12%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           GIGR I E L+   A +I  + ++    ++      N + + +++ D A   + + K+  
Sbjct: 16  GIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRA 75
Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G VD+L+NNA + R +  + + +E   D I + N+ +V  +S+ V + M+  +  G I
Sbjct: 76  EFGEVDILVNNAGITRDNLLMRMKDEEWND-IIETNLSSVFRLSKAVMRAMMKKR-HGRI 133
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           + +          G   Y+A+KA L   ++++A E+    I VN V P  + T       
Sbjct: 134 ITIG---------GQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIET------- 177
Query: 198 SDPAKAGPMLAKTPLGRFAG 217
           SD  +AG +LA+ P GR  G
Sbjct: 178 SDDQRAG-ILAQVPAGRLGG 196

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 73.9 bits (180), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 102/207 (49%), Gaps = 39/207 (18%)
Query: 31  KLSQHEAIIIALSKTQ---ANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVD 83
           +L++  AI +  ++     A LD+L Q  P    + V+LQD A+ R AV++     G +D
Sbjct: 26  RLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD 85
Query: 84  VLINNAAV-------ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH--KIQ 134
            L+NNA V       A  D F+   E NLI                 ++   + H    +
Sbjct: 86  GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYY-------------AMAHYCVPHLKATR 132
Query: 135 GSIVNVSSIAGKTALEGH---TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
           G+IVN+SS   KTA+ G    + Y ASK A  ++TR  A+ L  + +RVN+V P  VMT 
Sbjct: 133 GAIVNISS---KTAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTP 189
Query: 192 MGR---TGWSDP-AKAGPMLAKTPLGR 214
           + R     + DP AK   + AK PLGR
Sbjct: 190 LYRNWIATFEDPEAKLAEIAAKVPLGR 216

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 23  GIGRCIVEKLSQHEAIIIA--LSKTQANLD-------SLKQAFPNVQ-------TVQVDL 66
           G GR    +L+Q  A I+A  L + Q NLD        LK+    V+         Q D+
Sbjct: 57  GQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADV 116
Query: 67  QDWARTRA----AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQ 122
           +D A  +A    A+++ G +D+L++N  ++     + + ++   D I   N+    +  +
Sbjct: 117 RDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSD-ILQTNLIGAWHACR 175
Query: 123 VVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNS 182
            V  +MI+    GS++ VSS  G     G + Y+ASK  +  +  ++A E+G +NIRVNS
Sbjct: 176 AVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNS 235
Query: 183 VQPTVVMTQM 192
           V P  V T+M
Sbjct: 236 VNPGAVNTEM 245

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQAN-----LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG  I ++L +    ++A     +      L+  K    +    + ++ DW  T+ A  
Sbjct: 24  GIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFD 83
Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           KV    G +DVL+NNA + R   F  +  E+   ++ D N+ ++ N+++ V   M++   
Sbjct: 84  KVKAEVGEIDVLVNNAGITRDVVFRKMTREDW-QAVIDTNLTSLFNVTKQVIDGMVERG- 141
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            G I+N+SS+ G+    G T YS +KA +   T ++A E+    + VN+V P  + T M
Sbjct: 142 WGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDM 200

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 73.9 bits (180), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 96/196 (48%), Gaps = 5/196 (2%)
Query: 22  PGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQV-DLQDWARTRAAVSKVG 80
            GIG  I   L +  + +I     +  L SL  A  +  T++V +L +       +SK  
Sbjct: 24  SGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTS 83
Query: 81  PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNV 140
            +D+L+ NA +      + + +++  D + D+N+KA   +++   K MI  K  G I+N+
Sbjct: 84  NLDILVCNAGITSDTLAIRMKDQDF-DKVIDINLKANFILNREAIKKMI-QKRYGRIINI 141
Query: 141 SSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP 200
           SSI G     G   Y ASKA L  +T++++ E+    I VN+V P  + + M  T   + 
Sbjct: 142 SSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDM--TDKLNE 199
Query: 201 AKAGPMLAKTPLGRFA 216
            +   ++ K PLG + 
Sbjct: 200 KQREAIVQKIPLGTYG 215

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 92/190 (48%), Gaps = 20/190 (10%)
Query: 23  GIGRCIVEKLSQHEAIIIALS------------KTQANL----DSLKQAFPNVQTVQVDL 66
           G GR    +L+Q  A IIA+              T  +L    D +K     + T QVD+
Sbjct: 26  GQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLVKDLDRRIVTAQVDV 85
Query: 67  QDWARTRAAV----SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQ 122
           +D+   ++AV     ++G +D+++ NA V    R L    +N+   + D+N+  V +  +
Sbjct: 86  RDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQDMIDINLTGVWHTVK 145
Query: 123 VVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNS 182
                ++     GSIV  SS+ G+ A      Y A+K  +  + R  A+ELGP+ IRVN+
Sbjct: 146 AGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIGLMRAFAVELGPHMIRVNA 205
Query: 183 VQPTVVMTQM 192
           V PT V T M
Sbjct: 206 VLPTQVSTTM 215

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 62  VQVDLQDWARTRAAVSK----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAV 117
           V+VD+   A   AA+ K    +G  D+L  NA V+     +DI +E   D  FDVN + V
Sbjct: 63  VEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEW-DFNFDVNARGV 121
Query: 118 INISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYN 177
              +Q+  +  +    +G IVN +S+A K        YSASK A+   T+ +A E+ P N
Sbjct: 122 FLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKN 181
Query: 178 IRVNSVQPTVVMTQMGR---------TGWSDPAKAGPMLAKTPLGR 214
           IRVN V P  V T M            G +  A     ++ TPLGR
Sbjct: 182 IRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGR 227

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 13/199 (6%)
Query: 23  GIGRCIVEKLSQHE-AIIIAL---SKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG+ I  +L +   A+ IA    +  +A    + QA  +   V+VD+ D  +  AAV +
Sbjct: 13  GIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQ 72
Query: 79  ----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
               +G  DV++NNA VA       I  E ++D ++++N+K VI   Q   +        
Sbjct: 73  ARKTLGGFDVIVNNAGVAPSTPIESITPE-IVDKVYNINVKGVIWGIQAAVEAFKKEGHG 131
Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G I+N  S AG        +YS+SK A+  +T+T A +L P  I VN   P +V T M  
Sbjct: 132 GKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM-- 189
Query: 195 TGWSDPAKAGPMLAKTPLG 213
             W++  +     A  PLG
Sbjct: 190 --WAEIDRQVSEAAGKPLG 206

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 90/184 (48%), Gaps = 19/184 (10%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-------PNVQTVQVDL-----QDWA 70
           GIGR      +Q  A +    ++   L+  +Q           V +V  D+     QD  
Sbjct: 17  GIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQI 76
Query: 71  RTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLID---SIFDVNIKAVINISQVVSKT 127
              + + + G +DVL+NNA  A  D F     +  ID       +N++AVI +++ V   
Sbjct: 77  -INSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPH 135
Query: 128 MIDHKIQGSIVNVSSI-AGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 186
           ++  K  G IVNVSSI AG  A      Y+ +KAALD  TR+ A++L  + IRVNSV P 
Sbjct: 136 LVASK--GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPG 193
Query: 187 VVMT 190
           +V T
Sbjct: 194 MVET 197

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 19/205 (9%)
Query: 24  IGRCIVEKLSQHEA--IIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSKV 79
           IG   V  L++  A  II  L +  A   ++ L+    +V +V +D+ +    + AV  V
Sbjct: 25  IGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSV 84
Query: 80  ----GPVDVLINNAAVARFDRFLDIDEENLIDSIF----DVNIKAVINISQVVSKTMIDH 131
               G VD+L+  A +       ++  E++ D  +    D+N+  +    Q V + M++ 
Sbjct: 85  HEQEGRVDILVACAGIC----ISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQ 140
Query: 132 KIQGSIVNVSSIAGKTAL--EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
           K QG IV + S++G      +    Y+ASKA +    R++A E  P+ IR N+V PT + 
Sbjct: 141 K-QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIE 199
Query: 190 TQMGRTGWSDPAKAGPMLAKTPLGR 214
           T + R G   P      +A TP+GR
Sbjct: 200 TTLTRFGMEKPELYDAWIAGTPMGR 224

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 11/194 (5%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIG  I  + ++  A ++AL      + + +   P ++  ++D+ D  R +     +  +
Sbjct: 22  GIGAAIAMQFAELGAEVVALGLDADGVHAPRH--PRIRREELDITDSQRLQRLFEALPRL 79
Query: 83  DVLINNAAVARFDRFLDIDEENL--IDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNV 140
           DVL+NNA ++R     D +E +L   + +  +N+ A +  SQ+    +      GSI+N+
Sbjct: 80  DVLVNNAGISR-----DREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG--GSILNI 132
Query: 141 SSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP 200
           +S+           YSASK A+  +TR++A E     IRVN++ P  + T +G    +D 
Sbjct: 133 ASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADV 192
Query: 201 AKAGPMLAKTPLGR 214
                ++ +TPL R
Sbjct: 193 EATRRIMQRTPLAR 206

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           ++G +D+ + NA +      LD+  E     I D N+  V   +Q  ++ M+D  + G+I
Sbjct: 106 ELGGIDIAVCNAGIVSVQAMLDMPLEEF-QRIQDTNVTGVFLTAQAAARAMVDQGLGGTI 164
Query: 138 VNVSSIAGKTALEGHTI--------YSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
           +  +S      + GH I        Y  SKAA+  +T+ MA+EL P+ IRVNSV P  + 
Sbjct: 165 ITTAS------MSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIR 218
Query: 190 TQM 192
           T++
Sbjct: 219 TEL 221

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 5/134 (3%)
Query: 64  VDLQDWARTRA----AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVIN 119
           VD +D+ R R      V+ +G +D+++ NA VA    + DI  E+  D + D+N+    N
Sbjct: 80  VDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRD-VMDINVTGTWN 138
Query: 120 ISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIR 179
                +  +I+    GSI+ +SS AG         Y+ASK A+  + R  A ELG ++IR
Sbjct: 139 TVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIR 198
Query: 180 VNSVQPTVVMTQMG 193
           VNSV P  V T MG
Sbjct: 199 VNSVHPGPVNTPMG 212

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 9/199 (4%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQD----WARTRAAVS 77
           GIG+ I E L++  A +I  + +++   ++      N +   +++ +     A  +A   
Sbjct: 20  GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXALNVTNPESIEAVLKAITD 79
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           + G VD+L+NNA + R D  L   +E     I + N+ ++  +S+ V +     K QG I
Sbjct: 80  EFGGVDILVNNAGITR-DNLLXRXKEEEWSDIXETNLTSIFRLSKAVLRGXX-KKRQGRI 137
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           +NV S+ G     G   Y+A+KA +   T++ A E+    + VN+V P  + T   +   
Sbjct: 138 INVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVNTVAPGFIETDXTKA-L 196
Query: 198 SDPAKAGPMLAKTPLGRFA 216
           +D  +    LA+ P GR  
Sbjct: 197 NDEQRT-ATLAQVPAGRLG 214

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQ---AFPNVQTVQVDL---QDWAR-TR 73
           G+GR +  +  Q EA  +I   +  +  LD+ K+   A      VQ D+   +D     +
Sbjct: 26  GLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQ 85
Query: 74  AAVSKVGPVDVLINNAAVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
            A+ + G +DV+INNA V        L +D  N    + D N+      S+   K  +++
Sbjct: 86  TAIKEFGTLDVMINNAGVENPVPSHELSLDNWN---KVIDTNLTGAFLGSREAIKYFVEN 142
Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
            I+G+++N+SS+           Y+ASK  +  +T T+ALE  P  IRVN++ P  + T 
Sbjct: 143 DIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTP 202
Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFAGK 218
           +    ++DP +   + +  P+G + GK
Sbjct: 203 INAEKFADPVQRADVESMIPMG-YIGK 228

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQ---AFPNVQTVQVDL---QDWAR-TR 73
           G+GR +  +  Q EA  +I   +  +  LD+ K+   A      VQ D+   +D     +
Sbjct: 26  GLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQ 85
Query: 74  AAVSKVGPVDVLINNAAVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
            A+ + G +DV+INNA V        L +D  N    + D N+      S+   K  +++
Sbjct: 86  TAIKEFGTLDVMINNAGVENPVPSHELSLDNWN---KVIDTNLTGAFLGSREAIKYFVEN 142
Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
            I+G+++N+SS+           Y+ASK  +  +T T+ALE  P  IRVN++ P  + T 
Sbjct: 143 DIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTP 202
Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFAGK 218
           +    ++DP +   + +  P+G + GK
Sbjct: 203 INAEKFADPVQRADVESMIPMG-YIGK 228

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 70.5 bits (171), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 101/207 (48%), Gaps = 15/207 (7%)
Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQ---AFPNVQTVQVDL---QDWAR-TR 73
           G+GR +  +  Q EA  +I   +  +  LD+ K+   A      VQ D+   +D     +
Sbjct: 26  GLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQ 85
Query: 74  AAVSKVGPVDVLINNAAVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
            A+ + G +DV+INNA V        L +D  N    + D N+      S+   K  +++
Sbjct: 86  TAIKEFGTLDVMINNAGVENPVPSHELSLDNWN---KVIDTNLTGAFLGSREAIKYFVEN 142
Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
            I+G+++N+SS+           Y+ASK  +  +T T+ALE  P  IRVN++ P  + T 
Sbjct: 143 DIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTP 202
Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFAGK 218
           +    ++DP +   + +  P+G + GK
Sbjct: 203 INAEKFADPVQRADVESMIPMG-YIGK 228

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 70.5 bits (171), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/158 (34%), Positives = 83/158 (52%), Gaps = 9/158 (5%)
Query: 42  LSKTQANLDSLKQAFPN--VQTVQVDLQDWARTRAAVS----KVGPVDVLINNAAVAR-F 94
           L K +    ++ Q FPN  V   Q+D+    + +  +     +   +D+L+NNA  A   
Sbjct: 70  LEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGS 129
Query: 95  DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTI 154
           DR   I  E++ D +FD N+ A+INI+Q V   +   K  G IVN+ SIAG+ A    +I
Sbjct: 130 DRVGQIATEDIQD-VFDTNVTALINITQAVLP-IFQAKNSGDIVNLGSIAGRDAYPTGSI 187
Query: 155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           Y ASK A+ + T ++  EL    IRV  + P +V T+ 
Sbjct: 188 YCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEF 225

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 11/179 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANL-----DSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           G+G    E L+   A +I L+  +A L     D+L +   +   V  D+ D     AA S
Sbjct: 20  GLGFAYAEGLAAAGARVI-LNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFS 78
Query: 78  KVGP----VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           K+      VD+LINNA +      ++++ EN    + D N+ +   +S+  +K MI    
Sbjct: 79  KLDAEGIHVDILINNAGIQYRKPMVELELENW-QKVIDTNLTSAFLVSRSAAKRMIARNS 137
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            G I+N+ S+  + A      Y+A+K  +  +T +MA E   +NI+ N++ P  ++T M
Sbjct: 138 GGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDM 196

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 12/202 (5%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN--------VQTVQVDLQDWARTRA 74
           GIG+ I  +L +  A++I  + + +  + + +            V  V  D    A    
Sbjct: 38  GIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEH 97
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
               +G   +++NNA + R +  + + ++   D + + N+ ++  +S+ V + M   +  
Sbjct: 98  IQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFD-VVNTNLNSLYRLSKAVLRGMTKAR-W 155
Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G I+N+ S+ G     G T Y+A+KA L+  TR +A E+G   I VN+V P  + T M R
Sbjct: 156 GRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTR 215
Query: 195 TGWSDPAKAGPMLAKTPLGRFA 216
                 A+   +L + PLGR  
Sbjct: 216 E--LPEAQREALLGQIPLGRLG 235

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 109/222 (49%), Gaps = 18/222 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQAN-----LDSLKQ------AFPNVQTVQVDLQDWAR 71
           G+G+ +  + +  +A ++   +++ +     L+ +K+      A     TV+ D+ +  +
Sbjct: 18  GLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQ 77
Query: 72  TRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLID--SIFDVNIKAVINISQVVSKTMI 129
           +  A+ + G +DV+INNA +   +  +   E +L D   + D N+      S+   K  +
Sbjct: 78  S--AIKEFGKLDVMINNAGL---ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFV 132
Query: 130 DHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
           ++ I+G+++N+SS+  K        Y+ASK  +  +T+T+ALE  P  IRVN++ P  + 
Sbjct: 133 ENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIRVNNIGPGAIN 192
Query: 190 TQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS 231
           T +    ++DP +   + +  P+G      +      WL  S
Sbjct: 193 TPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASS 234

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 108/222 (48%), Gaps = 18/222 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQAN-----LDSLKQ------AFPNVQTVQVDLQDWAR 71
           G+G+ +  + +  +A ++   +++ +     L+ +K+      A     TV+ D+ +  +
Sbjct: 18  GLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQ 77
Query: 72  TRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLID--SIFDVNIKAVINISQVVSKTMI 129
           +  A+ + G +DV+INNA +A     +   E +L D   + D N+      S+   K  +
Sbjct: 78  S--AIKEFGKLDVMINNAGLANP---VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFV 132
Query: 130 DHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
           ++ I+G+++N+SS+  K        Y+ASK  +  +T T+ALE  P  IRVN++ P  + 
Sbjct: 133 ENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIN 192
Query: 190 TQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS 231
           T +    ++DP +   + +  P+G      +      WL  S
Sbjct: 193 TPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASS 234

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 108/222 (48%), Gaps = 18/222 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQAN-----LDSLKQ------AFPNVQTVQVDLQDWAR 71
           G+G+ +  + +  +A ++   +++ +     L+ +K+      A     TV+ D+ +  +
Sbjct: 18  GLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQ 77
Query: 72  TRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLID--SIFDVNIKAVINISQVVSKTMI 129
           +  A+ + G +DV+INNA +   +  +   E +L D   + D N+      S+   K  +
Sbjct: 78  S--AIKEFGKLDVMINNAGL---ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFV 132
Query: 130 DHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
           ++ I+G+++N+SS+  K        Y+ASK  +  +T T+ALE  P  IRVN++ P  + 
Sbjct: 133 ENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIN 192
Query: 190 TQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS 231
           T +    ++DP +   + +  P+G      +      WL  S
Sbjct: 193 TPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASS 234

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 108/222 (48%), Gaps = 18/222 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQAN-----LDSLKQ------AFPNVQTVQVDLQDWAR 71
           G+G+ +  + +  +A ++   +++ +     L+ +K+      A     TV+ D+ +  +
Sbjct: 18  GLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQ 77
Query: 72  TRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLID--SIFDVNIKAVINISQVVSKTMI 129
           +  A+ + G +DV+INNA +   +  +   E +L D   + D N+      S+   K  +
Sbjct: 78  S--AIKEFGKLDVMINNAGL---ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFV 132
Query: 130 DHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
           ++ I+G+++N+SS+  K        Y+ASK  +  +T T+ALE  P  IRVN++ P  + 
Sbjct: 133 ENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAIN 192
Query: 190 TQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS 231
           T +    ++DP +   + +  P+G      +      WL  S
Sbjct: 193 TPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASS 234

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 70/123 (56%), Gaps = 12/123 (9%)
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLID--SIFDVNIKAVINISQVVSKTMIDHK 132
           AV+  G + VL+NNA +        I++  L +   I DVN+  V    + V K M +  
Sbjct: 75  AVTAFGGLHVLVNNAGILNIGT---IEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG 131
Query: 133 IQGSIVNVSSI---AGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
            +GSI+N+SSI   AG  A  G   Y+A+K A+  +T++ ALELGP  IRVNS+ P +V 
Sbjct: 132 -RGSIINISSIEGLAGTVACHG---YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVK 187
Query: 190 TQM 192
           T M
Sbjct: 188 TPM 190

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 67  QDWARTRA-AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVS 125
           +DW R  A A  + G VD L+NNA ++    FL+ +       + ++N+  V    + V 
Sbjct: 64  EDWQRVVAYAREEFGSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVI 122
Query: 126 KTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
             M D    GSIVN+SS AG   L   + Y ASK  +  +++  A+ELG   IRVNSV P
Sbjct: 123 PAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHP 181
Query: 186 TVVMTQM-GRTGWSDPAKAGPMLAKTPLGRFA 216
            +  T M   TG        P    TP+GR  
Sbjct: 182 GMTYTPMTAETGIRQGEGNYP---NTPMGRVG 210

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 67  QDWARTRA-AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVS 125
           +DW R  A A  + G VD L+NNA ++    FL+ +       + ++N+  V    + V 
Sbjct: 64  EDWQRVVAYAREEFGSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVI 122
Query: 126 KTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
             M D    GSIVN+SS AG   L   + Y ASK  +  +++  A+ELG   IRVNSV P
Sbjct: 123 PAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHP 181
Query: 186 TVVMTQM-GRTGWSDPAKAGPMLAKTPLGRFA 216
            +  T M   TG        P    TP+GR  
Sbjct: 182 GMTYTPMTAETGIRQGEGNYP---NTPMGRVG 210

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQD----WARTRA 74
           GIG  I  +L +    +   ++ +  L +    L++A         D++      A   A
Sbjct: 37  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA 96
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINIS-QVVSKTMIDHKI 133
            V + GPVDVL+NNA         ++ +E  +D + + N+  V  ++ QV+    +  + 
Sbjct: 97  VVERYGPVDVLVNNAGRPGGGATAELADELWLD-VVETNLTGVFRVTKQVLKAGGMLERG 155
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN++S  GK  L     YSASK  +   T+ + LEL    I VN+V P  V T M 
Sbjct: 156 TGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA 215
Query: 194 ---RTGWSDPAKAGP------MLAKTPLGRF 215
              R  +SD  +         + A+ P+GR+
Sbjct: 216 ASVREHYSDIWEVSTEEAFDRITARVPIGRY 246

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 67.4 bits (163), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 78/143 (54%), Gaps = 4/143 (2%)
Query: 73  RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           +AA+ + G + VL+NNA       F D+   +  +  F +N+ ++  +SQ+ +  M    
Sbjct: 81  KAALDQFGKITVLVNNAGGGGPKPF-DMPMSDF-EWAFKLNLFSLFRLSQLAAPHM-QKA 137
Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G+I+N+SS+AG+        Y +SKAA++ +TR +A ++GP  IRVN++ P  + T  
Sbjct: 138 GGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDA 197
Query: 193 GRTGWSDPAKAGPMLAKTPLGRF 215
             T  + P     ML  TPLGR 
Sbjct: 198 LATVLT-PEIERAMLKHTPLGRL 219

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 24/194 (12%)
Query: 23  GIGRCIVEKLSQHEAIIIAL----------------SKTQANL----DSLKQAFPNVQTV 62
           G GR    +L+Q  A IIA+                + T  +L    D +K     + T 
Sbjct: 22  GQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTA 81
Query: 63  QVDLQDWARTRAAV----SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVI 118
           +VD++D+   +AAV     ++G +D+++ NA +      LD   E     + D+N+  V 
Sbjct: 82  EVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVW 141
Query: 119 NISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNI 178
              +     MI     GSI+  SS+ G  A      Y A+K  +  + R   +ELG + I
Sbjct: 142 KTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMI 201
Query: 179 RVNSVQPTVVMTQM 192
           RVNSV PT V T M
Sbjct: 202 RVNSVHPTHVKTPM 215

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 67.0 bits (162), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 12/179 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVD---LQDWART-RAAVS 77
           G+GR +V++     A +  L K+   L  L+ A   N   V  D   LQD  R     ++
Sbjct: 16  GLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLA 75
Query: 78  KVGPVDVLINNAAVARFDRFL-DIDEENL---IDSIFDVNIKAVINISQVVSKTMIDHKI 133
             G +D LI NA +  +   L D+ E+ +    D IF VN+K  I+  +     ++  + 
Sbjct: 76  AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR- 134
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            GS+V   S AG     G  +Y+A+K A+  + R MA EL P+ +RVN V P  + T +
Sbjct: 135 -GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDL 191

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 67.0 bits (162), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL-----KQAFPNVQTVQVDLQDWARTRA--- 74
           GIGR I    ++  A +    ++ A++D+      +     V  VQ D+ D A+  A   
Sbjct: 21  GIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAG 80
Query: 75  -AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            AV + G +DV+  NA V        +  E L + IF VN+       Q     +I    
Sbjct: 81  RAVEEFGGIDVVCANAGVFPDAPLATMTPEQL-NGIFAVNVNGTFYAVQACLDALIASG- 138
Query: 134 QGSIVNVSSIAGK-TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
            G +V  SSI G  T   G + Y A+KAA     RT A+EL P+ I VN++ P  +MT+
Sbjct: 139 SGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTE 197

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 70  ARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMI 129
           A  + A+   G +DV++NNA + R D  L   +++  D + D+N+  V   +Q  +K M+
Sbjct: 68  AMMKTAIDAWGTIDVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMM 126
Query: 130 DHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
             + +G I+N++S+ G     G   Y+A+KA +   ++T A E    NI VN V P  + 
Sbjct: 127 KKR-KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIA 185
Query: 190 TQMGRTGWSDPAKAGPMLAKTPLGR 214
           + M      D  K   +L   PLGR
Sbjct: 186 SDMTAKLGEDMEK--KILGTIPLGR 208

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQD----WARTRA 74
           GIG  I  +L +    +   ++ +  L +    L++A         D++      A   A
Sbjct: 37  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA 96
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINIS-QVVSKTMIDHKI 133
            V + GPVDVL+NNA         ++ +E  +D + + N+  V  ++ QV+    +  + 
Sbjct: 97  VVERYGPVDVLVNNAGRPGGGATAELADELWLD-VVETNLTGVFRVTKQVLKAGGMLERG 155
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN++S  GK  +     YSASK  +   T+ + LEL    I VN+V P  V T M 
Sbjct: 156 TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA 215
Query: 194 ---RTGWSDPAKAGP------MLAKTPLGRF 215
              R  +SD  +         + A+ P+GR+
Sbjct: 216 ASVREHYSDIWEVSTEEAFDRITARVPIGRY 246

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQD----WARTRA 74
           GIG  I  +L +    +   ++ +  L +    L++A         D++      A   A
Sbjct: 33  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA 92
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINIS-QVVSKTMIDHKI 133
            V + GPVDVL+NNA         ++ +E  +D + + N+  V  ++ QV+    +  + 
Sbjct: 93  VVERYGPVDVLVNNAGRPGGGATAELADELWLD-VVETNLTGVFRVTKQVLKAGGMLERG 151
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN++S  GK  +     YSASK  +   T+ + LEL    I VN+V P  V T M 
Sbjct: 152 TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA 211
Query: 194 ---RTGWSDPAKAGP------MLAKTPLGRF 215
              R  +SD  +         + A+ P+GR+
Sbjct: 212 ASVREHYSDIWEVSTEEAFDRITARVPIGRY 242

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQD----WARTRA 74
           GIG  I  +L +    +   ++ +  L +    L++A         D++      A   A
Sbjct: 37  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA 96
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINIS-QVVSKTMIDHKI 133
            V + GPVDVL+NNA         ++ +E  +D + + N+  V  ++ QV+    +  + 
Sbjct: 97  VVERYGPVDVLVNNAGRLGGGATAELADELWLD-VVETNLTGVFRVTKQVLKAGGMLERG 155
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN++S  GK  +     YSASK  +   T+ + LEL    I VN+V P  V T M 
Sbjct: 156 TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA 215
Query: 194 ---RTGWSDPAKAGP------MLAKTPLGRF 215
              R  +SD  +         + A+ P+GR+
Sbjct: 216 ASVREHYSDIWEVSTEEAFDRITARVPIGRY 246

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQD----WARTRA 74
           GIG  I  +L +    +   ++ +  L +    L++A         D++      A   A
Sbjct: 33  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA 92
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINIS-QVVSKTMIDHKI 133
            V + GPVDVL+NNA         ++ +E  +D + + N+  V  ++ QV+    +  + 
Sbjct: 93  VVERYGPVDVLVNNAGRLGGGATAELADELWLD-VVETNLTGVFRVTKQVLKAGGMLERG 151
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN++S  GK  +     YSASK  +   T+ + LEL    I VN+V P  V T M 
Sbjct: 152 TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA 211
Query: 194 ---RTGWSDPAKAGP------MLAKTPLGRF 215
              R  +SD  +         + A+ P+GR+
Sbjct: 212 ASVREHYSDIWEVSTEEAFDRITARVPIGRY 242

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQD----WARTRA 74
           GIG  I  +L +    +   ++ +  L +    L++A         D++      A   A
Sbjct: 17  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA 76
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINIS-QVVSKTMIDHKI 133
            V + GPVDVL+NNA         ++ +E  +D + + N+  V  ++ QV+    +  + 
Sbjct: 77  VVERYGPVDVLVNNAGRPGGGATAELADELWLD-VVETNLTGVFRVTKQVLKAGGMLERG 135
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN++S  GK  +     YSASK  +   T+ + LEL    I VN+V P  V T M 
Sbjct: 136 TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA 195
Query: 194 ---RTGWSDPAKAGP------MLAKTPLGRF 215
              R  +SD  +         + A+ P+GR+
Sbjct: 196 ASVREHYSDIWEVSTEEAFDRITARVPIGRY 226

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQD----WARTRA 74
           GIG  I  +L +    +   ++ +  L +    L++A         D++      A   A
Sbjct: 37  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA 96
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINIS-QVVSKTMIDHKI 133
            V + GPVDVL+NNA         ++ +E  +D + + N+  V  ++ QV+    +  + 
Sbjct: 97  VVERYGPVDVLVNNAGRPGGGATAELADELWLD-VVETNLTGVFRVTKQVLKAGGMLERG 155
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN++S  GK  +     YSASK  +   T+ + LEL    I VN+V P  V T M 
Sbjct: 156 TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA 215
Query: 194 ---RTGWSDPAKAGP------MLAKTPLGRF 215
              R  +SD  +         + A+ P+GR+
Sbjct: 216 ASVREHFSDIWEVSTEEAFDRITARVPIGRY 246

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 78/148 (52%), Gaps = 7/148 (4%)
Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           A  + +G +D+++NNA V    R  +  + +   S+  VN++A   I +  +  +     
Sbjct: 87  AVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSL-GVNVEAPFRICRA-AIPLXAAAG 144
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G+IVNV+S  G     GH +Y  +KAAL S+T+    +  P  IR+N+V P  V T   
Sbjct: 145 GGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXL 204
Query: 194 RTGWS----DPAKAGPMLAKT-PLGRFA 216
           RTG++    DP +A   L +T PLGR A
Sbjct: 205 RTGFAKRGFDPDRAVAELGRTVPLGRIA 232

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 88/169 (52%), Gaps = 10/169 (5%)
Query: 23  GIGRCIVEKLSQHEAIIIA--LSKTQANLDSLK----QAFPNVQTVQVDLQDWARTRAAV 76
           G+G+   +  +++ A ++          +D +K    +A+P+   V  D +  A  +  +
Sbjct: 333 GLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSE--AIIKNVI 390
Query: 77  SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
            K G +D+L+NNA + R   F  + ++   DS+  V++    N+S++     ++ +  G 
Sbjct: 391 DKYGTIDILVNNAGILRDRSFAKMSKQEW-DSVQQVHLIGTFNLSRLAWPYFVEKQF-GR 448
Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
           I+N++S +G     G   YS+SKA +  +++TMA+E    NI+VN V P
Sbjct: 449 IINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAP 497

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Query: 73  RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
             AV   G V V+INNA + R      + E++    + DV++     +++         K
Sbjct: 83  ETAVKNFGTVHVIINNAGILRDASMKKMTEKDY-KLVIDVHLNGAFAVTKAAWPYFQKQK 141
Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G IVN SS AG     G   Y+++K+AL     T+A E   YNI+ N++ P      +
Sbjct: 142 Y-GRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAP------L 194
Query: 193 GRTGWSDPAKAGPMLAK 209
            R+  ++     PML K
Sbjct: 195 ARSRMTESIMPPPMLEK 211

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 4/141 (2%)
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           A   +G +D L+NNA + R    + + +E+  +++ + N+ AV   ++   K M+  +  
Sbjct: 74  AAEVLGGLDTLVNNAGITRDTLLVRMKDEDW-EAVLEANLSAVFRTTREAVKLMMKARF- 131
Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G IVN++S+ G     G   Y ASKA L   TR +A E     I VN+V P  + T+M  
Sbjct: 132 GRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTE 191
Query: 195 TGWSDPAKAGPMLAKTPLGRF 215
               +  +A   L + P GRF
Sbjct: 192 RLPQEVKEA--YLKQIPAGRF 210

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 9/164 (5%)
Query: 62  VQVDLQD----WARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAV 117
            +VD+ D     A   A V+  G VD L+ NA V      +D   E+  D +  +N++  
Sbjct: 80  CRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDF-DRVIAINLRGA 138
Query: 118 INISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYN 177
              ++  +  MI+    G+IVN+SS+AG+ A+ G   Y  SKA +  ++R  A EL    
Sbjct: 139 WLCTKHAAPRMIERG-GGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSG 197
Query: 178 IRVNSVQPTVVMTQMGRTGWS--DPAKAGPMLAKTPLGRFAGKL 219
           IR N++ P  V T M +T  +  D A  G   A++ + R  G++
Sbjct: 198 IRSNTLLPAFVDTPMQQTAMAMFDGAL-GAGGARSMIARLQGRM 240

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 19/211 (9%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQD----WARTRA 74
           GIG  I  +L +    +   ++ +  L +    L++A         D++      A   A
Sbjct: 37  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA 96
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINIS-QVVSKTMIDHKI 133
            V + GPVDVL+NNA         ++ +E  +D + + N+  V  ++ QV+    +  + 
Sbjct: 97  VVERYGPVDVLVNNAGRPGGGATAELADELWLD-VVETNLTGVFRVTKQVLKAGGMLERG 155
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN++S  GK  +     YSASK  +   T+ + LEL    I VN+V P  V T M 
Sbjct: 156 TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGWVETPMA 215
Query: 194 ---RTGWSDPAKAGP------MLAKTPLGRF 215
              R  +SD  +         + A+ P+GR+
Sbjct: 216 ASVREHYSDIWEVSTEEAFDRITARVPIGRY 246

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 11/180 (6%)
Query: 14  TKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWART 72
           T GG     GIGR   E  +++ A +++A     A +    +       V+VD+      
Sbjct: 33  TGGG----SGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDA 88
Query: 73  RAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTM 128
            + V K     G VDVL+NNA        + I EE   D I  VN+K +   S+ V   +
Sbjct: 89  ESXVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETW-DRIXSVNVKGIFLCSKYVIP-V 146
Query: 129 IDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
                 GSI+N +S    +A+   T Y ASK A+ S+TR  A +     IRVN+V P  +
Sbjct: 147 XRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAPGTI 206

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 64.7 bits (156), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD----SLKQAFPNVQTVQVDLQDWARTRAAV-- 76
           GIG  I    ++  A I+     Q  +D    + K A  N      D+ D    +A V  
Sbjct: 45  GIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQ 104
Query: 77  --SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
             S+VG +D+L+NNA + R    +++        + D+++ A   +S+ V  +MI  K  
Sbjct: 105 IESEVGIIDILVNNAGIIRRVPMIEMTAAQF-RQVIDIDLNAPFIVSKAVIPSMI-KKGH 162
Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT---- 190
           G I+N+ S+  +   E  + Y+A+K  L  +T+ +A E G  NI+ N + P  + T    
Sbjct: 163 GKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTA 222
Query: 191 ---QMGRTGWSDPAKAGPMLAKTPLGR 214
              ++ + G   P     ++AKTP  R
Sbjct: 223 PLRELQKDGSRHPFDQ-FIIAKTPAAR 248

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKT--QANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVG 80
           G+G+ I   L+   A ++  ++      LD + +   N   + +D  D    + + +  G
Sbjct: 20  GLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAG 79
Query: 81  PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNV 140
             D+L+NNA + R    ++  E +  D + DVN+KA+   +Q  +K ++     G +VN+
Sbjct: 80  -FDILVNNAGIIRRADSVEFSELDW-DEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNI 137
Query: 141 SSIAGKTALEGHT---IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           +S+    + +G      Y+A+K  +  +T+ +A E     I VN++ P  + T       
Sbjct: 138 ASL---LSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALR 194
Query: 198 SDPAKAGPMLAKTPLGRF 215
           +D A+   +L + P GR+
Sbjct: 195 ADAARNKAILERIPAGRW 212

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 16/170 (9%)
Query: 30  EKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA 89
           E+L +    I+A   ++ N++S+      V  V  D          + K G +D+L+NNA
Sbjct: 41  ERLEETRQQILAAGVSEQNVNSV------VADVTTDAGQDEILSTTLGKFGKLDILVNNA 94
Query: 90  AVARFDRFLDIDEENLI---DSIFDVNIKAVINISQVVSKTMIDH--KIQGSIVNVSSIA 144
             A  D          I   D+  ++N+++VI     ++K  + H    +G IVN+SSIA
Sbjct: 95  GAAIPDSQSKTGTAQSIESYDATLNLNLRSVI----ALTKKAVPHLSSTKGEIVNISSIA 150
Query: 145 -GKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G  A      YS +KAA+D  TR  A++L  + IRVNS+ P +V T  G
Sbjct: 151 SGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFG 200

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 9/137 (6%)
Query: 62  VQVDLQDW----ARTRAAVSKVGPVDVLINNAAVARF--DRFLDIDEENLIDSIFDVNIK 115
           ++ DL D     A   A V++ G +D L+NNA +A    D FLD+  EN  D+I  VN++
Sbjct: 84  LRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENF-DTIVGVNLR 142
Query: 116 AVINISQVVSKTMI--DHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL 173
             +  +Q V K  +  D +   SI+N++S++          Y  SKA L + ++ +AL L
Sbjct: 143 GTVFFTQAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALRL 202
Query: 174 GPYNIRVNSVQPTVVMT 190
               I V  V+P ++ +
Sbjct: 203 AETGIAVFEVRPGIIRS 219

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 64.3 bits (155), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 25/203 (12%)
Query: 31  KLSQHEAIIIALSKTQANLDSLK---QAFPN-VQTVQVDLQDWARTRAAVS----KVGPV 82
           + ++  A ++   +T+  L+  K   + FP  + TVQ D+++    +  +     K G +
Sbjct: 25  RFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDVRNTDDIQKXIEQIDEKFGRI 84
Query: 83  DVLINNAAVARFDRFLDIDEE---NLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVN 139
           D+LINNAA      F+   E+   N  +S+ ++ +      SQ + K  I+  I+G+I+N
Sbjct: 85  DILINNAA----GNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIIN 140
Query: 140 VSSIAGKTALEGHTIYSASKAALDSITRTMALELG-PYNIRVNSVQPTVVMTQMGRTG-- 196
             +     A  G    +A+KA + + T+T+A+E G  Y IRVN++ P  +     RTG  
Sbjct: 141 XVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRVNAIAPGPIE----RTGGA 196
Query: 197 ---WSDPAKAGPMLAKTPLGRFA 216
              W     A   +   PLGR  
Sbjct: 197 DKLWISEEXAKRTIQSVPLGRLG 219

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/122 (39%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLID--SIFDVNIKAV-INISQVVSKTMIDH 131
           AV+  G + VL+NNA +        I++  L +   I DVN+  V + I  VV       
Sbjct: 75  AVTAFGGLHVLVNNAGILNIGT---IEDYALTEWQRILDVNLTGVFLGIRAVVKPX--KE 129
Query: 132 KIQGSIVNVSSI---AGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
             +GSI+N+SSI   AG  A  G   Y+A+K A+  +T++ ALELGP  IRVNS+ P +V
Sbjct: 130 AGRGSIINISSIEGLAGTVACHG---YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLV 186
Query: 189 MT 190
            T
Sbjct: 187 KT 188

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 9/179 (5%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSK 78
           GIG  I  KL    A ++  ++    L ++++    A    ++   DL       A  + 
Sbjct: 40  GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATG 99
Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           V    G  DVL+NNA V  F   L   +    D++  VN+KA   + +  +  MI  K +
Sbjct: 100 VLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-R 158
Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           G I+N+SS+AGK  +     Y+ASK  L+ +  + A EL  + +RV+ V P  V T+ G
Sbjct: 159 GHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFG 217

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDL-----QDWARTRAAV 76
           G+GR +V++     A +  L K+   L  L+     NV  +  D+     Q  A +R  V
Sbjct: 16  GLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRC-V 74
Query: 77  SKVGPVDVLINNAAVARFDRFL-DIDEENL---IDSIFDVNIKAVINISQVVSKTMIDHK 132
           ++ G +D LI NA +  +   L D+ EE+L    D +F +N+K  I+  +     ++  +
Sbjct: 75  ARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR 134
Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSV 183
             G+++   S AG     G  +Y+A+K A+  + R +A EL PY +RVN V
Sbjct: 135 --GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGV 182

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN---VQTV--QVDLQDWARTR---- 73
           G+G  I + L++    ++  S+         Q       V+T+  + D+ ++   +    
Sbjct: 32  GLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE 91
Query: 74  AAVSKVGPVDVLINNAAVAR--------FDRFLDIDEENLIDSIFDVNIKAVINISQVVS 125
           A   K G +D ++N A + R         D F  + E NL  + + V  +A         
Sbjct: 92  AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYY-VCREAF-------- 142
Query: 126 KTMIDHKIQGSIVNVSSIA-GKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQ 184
            +++      SI+N+ S+   +  +   + Y+ASK  + S+T+ +A E G Y IRVN + 
Sbjct: 143 -SLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIA 201
Query: 185 PTVVMTQMGRTGWSDPAKAGPMLAKTPLGR 214
           P    T+M    +SDP K   ML + PLGR
Sbjct: 202 PGWYRTKMTEAVFSDPEKLDYMLKRIPLGR 231

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 90/184 (48%), Gaps = 16/184 (8%)
Query: 23  GIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQT---VQVDLQDWARTRA---- 74
           GIG+   E L++   A+++A    +A     KQ   +  T   V VD+ D    +A    
Sbjct: 20  GIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADR 79
Query: 75  AVSKVGPVDVLINNAAV---ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
            +++ G +D L+NNAA+    + D  L ID E        VN+   +  ++ V K M   
Sbjct: 80  TLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPE-YYKKFMSVNLDGALWCTRAVYKKMT-K 137
Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
           +  G+IVN SS A   A      Y  +K  ++ +T+ ++ ELG  NIR+N++ P  + T+
Sbjct: 138 RGGGAIVNQSSTA---AWLYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTE 194
Query: 192 MGRT 195
             RT
Sbjct: 195 ANRT 198

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 14/175 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           G G CI  +  Q    +IA  + Q  L  LK     N+   Q+D+    R RAA+ ++  
Sbjct: 11  GFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDV----RNRAAIEEMLA 66
Query: 80  ------GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                   +D+L+NNA +A              +++ D N K ++ +++ V   M++   
Sbjct: 67  SLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN- 125
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
            G I+N+ S AG     G  +Y A+KA +   +  +  +L    +RV  ++P +V
Sbjct: 126 HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLV 180

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 17/174 (9%)
Query: 24  IGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDW-----------ART 72
           IG     +L++ E   IAL     N ++L++A  +V+   V+ + +              
Sbjct: 19  IGLATALRLAE-EGTAIAL--LDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTV 75
Query: 73  RAAVSKVGPVDVLINNAAV-ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
            + V   G +D L NNA     F    D   ++    +  +N+    ++ + VS+ MI  
Sbjct: 76  DSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFA-RVLTINVTGAFHVLKAVSRQMITQ 134
Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
              G IVN +S+AG         Y  SK A+ ++T T AL+L PYNIRVN++ P
Sbjct: 135 NY-GRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISP 187

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 37  AIIIALSKTQANLDSLKQAFPNVQ----TVQVDLQDWAR----TRAAVSKVGPVDVLINN 88
           A  +A  +  A +    QAF   Q    T  +D+ D A+     +  +++   +D L+N 
Sbjct: 22  ATALAFVEAGAKVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNA 81
Query: 89  AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ--GSIVNVSSIAGK 146
           A + R      + +E+     F VN+    N+ Q   +TM   + Q  G+IV V+S A  
Sbjct: 82  AGILRMGATDQLSKEDW-QQTFAVNVGGAFNLFQ---QTMNQFRRQRGGAIVTVASDAAH 137
Query: 147 TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW-SDPAK 202
           T   G + Y ASKAAL S+  ++ LEL    +R N V P    T M RT W SD A+
Sbjct: 138 TPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAE 194

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 43  SKTQANLDSLKQAFPNVQTVQVDLQDWART----RAAVSKVGPVDVLINNAAVARFDRFL 98
           S  Q+ +D +  A         ++ DW +     + AV   G +DVL+NNA + R DR +
Sbjct: 72  SAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVR-DRMI 130
Query: 99  DIDEENLIDSIFDVNIKAVINISQVVSK-----TMIDHKIQGSIVNVSSIAGKTALEGHT 153
               E   D++  V++K      +  +      +     + G I+N SS AG     G  
Sbjct: 131 ANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQG 190
Query: 154 IYSASKAALDSITRTMALELGPYNIRVNSVQPT 186
            YSA+KA + ++T   A E+G Y + VN++ P+
Sbjct: 191 NYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS 223

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 9/199 (4%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQV-----DLQDWARTRAAVS 77
           GIG  I    +   A +I + +  A LD   Q        ++     D +      A   
Sbjct: 22  GIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAE 81
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
            V PV +L+N+A +AR    L+ D+      +  VN+  +   S+   + M+  +  G+I
Sbjct: 82  AVAPVSILVNSAGIARLHDALETDDATW-RQVMAVNVDGMFWASRAFGRAMV-ARGAGAI 139
Query: 138 VNVSSIAGKTA--LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT 195
           VN+ S++G      +  + Y ASK A+  +TR +A E     +RVN++ P  V T+M   
Sbjct: 140 VNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLK 199
Query: 196 GWSDPAKAGPMLAKTPLGR 214
               P      L  TP+GR
Sbjct: 200 MRERPELFETWLDMTPMGR 218

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----NVQTVQVDLQDWART----R 73
           GIGR I    ++  A +   +++   L S+          NV  V++D+ D        R
Sbjct: 52  GIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAAR 111
Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
             V   G +DV+  NA +    R   +  E L   + DVN+K  +   Q     +     
Sbjct: 112 TVVDAFGALDVVCANAGIFPEARLDTMTPEQL-SEVLDVNVKGTVYTVQACLAPLTASG- 169
Query: 134 QGSIVNVSSIAGK-TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ- 191
           +G ++  SSI G  T   G + Y ASKAA     RT A+EL P  + VN++ P  ++T+ 
Sbjct: 170 RGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEG 229
Query: 192 ---MGRTGWSDPAKAGPM 206
              MG    S  A++ PM
Sbjct: 230 LVDMGEEYISGMARSIPM 247

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 97/218 (44%), Gaps = 22/218 (10%)
Query: 14  TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANL---------DSLKQAFPNVQTVQV 64
           T GG     GIG  I E   +H    +  S++   +          + ++  P    V+ 
Sbjct: 33  TGGGS----GIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA 88
Query: 65  DLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVV 124
                A    A+ + G +D+LIN AA   F         N   ++ D++     N+S+V+
Sbjct: 89  PPAVMAAVDQALKEFGRIDILINCAA-GNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVL 147
Query: 125 -SKTMIDHKIQGSIVNVSSIAGK--TALEGHTIYSASKAALDSITRTMALELGPYNIRVN 181
             K   DH   G IVN+++  G    AL+ H    ++KAA+D++TR +A+E GP NIRVN
Sbjct: 148 YEKFFRDHG--GVIVNITATLGNRGQALQVHA--GSAKAAVDAMTRHLAVEWGPQNIRVN 203
Query: 182 SVQPTVVMTQMGRTGWSDP-AKAGPMLAKTPLGRFAGK 218
           S+ P  +    G      P A     +  +PL R   K
Sbjct: 204 SLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNK 241

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 13/208 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNV----QTVQVDLQDWARTRAAVSK 78
           G+GR + E L+   A I+      + +    Q F NV    + V  D+   +    A ++
Sbjct: 37  GLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFAR 96
Query: 79  VGP----VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           +      VD+L+NNA +      ++++  +    + D N+ +   I +  +K MI     
Sbjct: 97  LDEQGIDVDILVNNAGIQFRKPMIELETADW-QRVIDTNLTSAFMIGREAAKRMIPRGY- 154
Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G IVN+ S+  + A      Y+ +K  +  +TR MA E   Y I+ N++ P  ++T M +
Sbjct: 155 GKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQ 214
Query: 195 TGWSDPAKAGPMLAKTPLGRFAGKLKPK 222
               +P     + A+TP  R+    KP+
Sbjct: 215 ALIDNPEFDAWVKARTPAKRWG---KPQ 239

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 36  EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWART-RAAVSKVGPVDVLINNAAVARF 94
           E ++ A+ K  ++   +K    NV  V+    D  R    AV   G +D++ +N+ V  F
Sbjct: 68  EEVVAAIKKNGSDAACVK---ANVGVVE----DIVRMFEEAVKIFGKLDIVCSNSGVVSF 120
Query: 95  DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-ALEGHT 153
               D+  E   D +F +N +    +++   K +   +I G ++ + SI G+  A+  H 
Sbjct: 121 GHVKDVTPEEF-DRVFTINTRGQFFVAREAYKHL---EIGGRLILMGSITGQAKAVPKHA 176
Query: 154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLG 213
           +YS SK A+++  R MA+++    I VN V P  + T M      +    G  L+   + 
Sbjct: 177 VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVD 236
Query: 214 RFAGKLKPKPWNRWLLP 230
            +A  ++  P  R  LP
Sbjct: 237 EYA-AVQWSPLRRVGLP 252

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 91/197 (46%), Gaps = 14/197 (7%)
Query: 36  EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWART-RAAVSKVGPVDVLINNAAVARF 94
           E ++ A+ K  ++   +K    NV  V+    D  R    AV   G +D++ +N+ V  F
Sbjct: 68  EEVVAAIKKNGSDAACVKA---NVGVVE----DIVRMFEEAVKIFGKLDIVCSNSGVVSF 120
Query: 95  DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-ALEGHT 153
               D+  E   D +F +N +    +++   K +   +I G ++ + SI G+  A+  H 
Sbjct: 121 GHVKDVTPEEF-DRVFTINTRGQFFVAREAYKHL---EIGGRLILMGSITGQAKAVPKHA 176
Query: 154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLG 213
           +YS SK A+++  R MA+++    I VN V P  + T M      +    G  L+   + 
Sbjct: 177 VYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVD 236
Query: 214 RFAGKLKPKPWNRWLLP 230
            +A  ++  P  R  LP
Sbjct: 237 EYA-AVQWSPLRRVGLP 252

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 82  VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS 141
           +D+L+NNA + R   F+ + +++  D +  VN+ A   +++ +  +M+  +  G I+N++
Sbjct: 102 IDILVNNAGITRDGLFVRMQDQDW-DDVLAVNLTAASTLTRELIHSMMRRRY-GRIINIT 159
Query: 142 SIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           SI G     G T Y A+KA L   ++ +A E+   NI VN + P  + + M
Sbjct: 160 SIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAM 210

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 80  GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVN 139
           G +DV +NNAA       ++++E +  D   ++N KA++  +Q  +K M +    G IV+
Sbjct: 81  GRLDVFVNNAASGVLRPVMELEETHW-DWTMNINAKALLFCAQEAAKLM-EKNGGGHIVS 138
Query: 140 VSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
           +SS+     LE +T    SKAAL+++TR +A+EL P  I VN+V    + T
Sbjct: 139 ISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDT 189

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Query: 62  VQVDLQDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAV 117
           V+VD+ D      A + V    GPV+VL++NA ++  D FL    E   + + + N+   
Sbjct: 78  VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGA 136
Query: 118 INISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYN 177
             ++Q  S++M  +K  G ++ ++S++G   +     Y+ASKA +  + R++A EL   N
Sbjct: 137 FRVAQRASRSMQRNKF-GRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKAN 195
Query: 178 IRVNSVQPTVVMTQMGR 194
           +  N V P  + T M R
Sbjct: 196 VTANVVAPGYIDTDMTR 212

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 60.5 bits (145), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 11/180 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAV 76
           G+GR    +L+   A +  +  +   L++ K A         V T   D+ D A+  A V
Sbjct: 24  GLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYV 83
Query: 77  S----KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           +    + G +D   NNA +       +       D +  +N++ V    + V K M +  
Sbjct: 84  TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG 143
Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G +VN +S+ G   +   + Y+A+K  +  +TR  A+E G Y IR+N++ P  + T M
Sbjct: 144 -SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM 202

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 13/181 (7%)
Query: 23  GIGRCIVEKLSQHEAIIIALS-----KTQA--NLDSLKQAFPNVQTVQVDLQDWARTRAA 75
           GIGR I EKL+  +   IA++     + QA   +  ++ A      V +D+ D A   +A
Sbjct: 13  GIGRGISEKLA-ADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSA 71
Query: 76  V----SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
           +     K+G  DVL+NNA +A+    L++ EE+L   I+ VN+ +V    Q  S+   + 
Sbjct: 72  IDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDL-KQIYSVNVFSVFFGIQAASRKFDEL 130
Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
            ++G I+N +SIA        + YS +K A+  +T+  A EL P    VN+  P +V T 
Sbjct: 131 GVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTG 190
Query: 192 M 192
           M
Sbjct: 191 M 191

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 47  ANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLI 106
           ANL+SL      V+ +   L +  + R   +K    D+LINNA +     F++   E   
Sbjct: 64  ANLESLH----GVEALYSSLDNELQNRTGSTKF---DILINNAGIGP-GAFIEETTEQFF 115
Query: 107 DSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT 166
           D    VN KA   I Q     + D+     I+N+SS A + +L     YS +K A+++ T
Sbjct: 116 DRXVSVNAKAPFFIIQQALSRLRDNS---RIINISSAATRISLPDFIAYSXTKGAINTXT 172
Query: 167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP 200
            T+A +LG   I VN++ P  V T       SDP
Sbjct: 173 FTLAKQLGARGITVNAILPGFVKTDXNAELLSDP 206

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 6/137 (4%)
Query: 62  VQVDLQDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAV 117
           V+VD+ D      A + V    GPV+VL++NA ++  D FL    E   + + + N+   
Sbjct: 58  VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGA 116
Query: 118 INISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYN 177
             ++Q  S++M  +K  G ++ + S++G   +     Y+ASKA +  + R++A EL   N
Sbjct: 117 FRVAQRASRSMQRNKF-GRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKAN 175
Query: 178 IRVNSVQPTVVMTQMGR 194
           +  N V P  + T M R
Sbjct: 176 VTANVVAPGYIDTDMTR 192

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRA--AVSKV- 79
           GIG  I E  ++  A ++A+   ++  ++L +    V    +    W    A  AV K+ 
Sbjct: 216 GIGATIAEVFARDGAHVVAID-VESAAENLAETASKVGGTAL----WLDVTADDAVDKIS 270
Query: 80  --------GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQ-VVSKTMID 130
                   G  D+L+NNA + R D+ L   ++   D++  VN+ A + +++ +V    I 
Sbjct: 271 EHLRDHHGGKADILVNNAGITR-DKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIG 329
Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
               G ++ +SSIAG     G T Y+ +KA +  IT+ +A  L    I +N+V P  + T
Sbjct: 330 EG--GRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIET 387
Query: 191 QM 192
           QM
Sbjct: 388 QM 389

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 62  VQVDLQDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAV 117
           V+ D+ D      A + V    GPV+VL++NA ++  D FL    E   + + + N+   
Sbjct: 58  VECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGA 116
Query: 118 INISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYN 177
             ++Q  S++M  +K  G ++ + S++G   +     Y+ASKA +  + R++A EL   N
Sbjct: 117 FRVAQRASRSMQRNKF-GRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKAN 175
Query: 178 IRVNSVQPTVVMTQMGR 194
           +  N V P  + T M R
Sbjct: 176 VTANVVAPGYIDTDMTR 192

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRA--AVSKV- 79
           GIG  I E  ++  A ++A+   ++  ++L +    V    +    W    A  AV K+ 
Sbjct: 232 GIGATIAEVFARDGAHVVAI-DVESAAENLAETASKVGGTAL----WLDVTADDAVDKIS 286
Query: 80  --------GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQ-VVSKTMID 130
                   G  D+L+NNA + R D+ L   ++   D++  VN+ A + +++ +V    I 
Sbjct: 287 EHLRDHHGGKADILVNNAGITR-DKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIG 345
Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
               G ++ +SSIAG     G T Y+ +KA +  IT+ +A  L    I +N+V P  + T
Sbjct: 346 EG--GRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIET 403
Query: 191 QM 192
           QM
Sbjct: 404 QM 405

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRA--AVSKV- 79
           GIG  I E  ++  A ++A+   ++  ++L +    V    +    W    A  AV K+ 
Sbjct: 245 GIGATIAEVFARDGAHVVAI-DVESAAENLAETASKVGGTAL----WLDVTADDAVDKIS 299
Query: 80  --------GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQ-VVSKTMID 130
                   G  D+L+NNA + R D+ L   ++   D++  VN+ A + +++ +V    I 
Sbjct: 300 EHLRDHHGGKADILVNNAGITR-DKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIG 358
Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
               G ++ +SSIAG     G T Y+ +KA +  IT+ +A  L    I +N+V P  + T
Sbjct: 359 EG--GRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIET 416
Query: 191 QM 192
           QM
Sbjct: 417 QM 418

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRA--AVSKV- 79
           GIG  I E  ++  A ++A+   ++  ++L +    V    +    W    A  AV K+ 
Sbjct: 208 GIGATIAEVFARDGAHVVAID-VESAAENLAETASKVGGTAL----WLDVTADDAVDKIS 262
Query: 80  --------GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQ-VVSKTMID 130
                   G  D+L+NNA + R D+ L   ++   D++  VN+ A + +++ +V    I 
Sbjct: 263 EHLRDHHGGKADILVNNAGITR-DKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIG 321
Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
               G ++ +SSIAG     G T Y+ +KA +  IT+ +A  L    I +N+V P  + T
Sbjct: 322 EG--GRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIET 379
Query: 191 QM 192
           QM
Sbjct: 380 QM 381

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 88/182 (48%), Gaps = 20/182 (10%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRA--AVSKV- 79
           GIG  I E  ++  A ++A+   ++  ++L +    V    +    W    A  AV K+ 
Sbjct: 224 GIGATIAEVFARDGAHVVAI-DVESAAENLAETASKVGGTAL----WLDVTADDAVDKIS 278
Query: 80  --------GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQ-VVSKTMID 130
                   G  D+L+NNA + R D+ L   ++   D++  VN+ A + +++ +V    I 
Sbjct: 279 EHLRDHHGGKADILVNNAGITR-DKLLANMDDARWDAVLAVNLLAPLRLTEGLVGNGSIG 337
Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
               G ++ +SSIAG     G T Y+ +KA +  IT+ +A  L    I +N+V P  + T
Sbjct: 338 EG--GRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGLAAKGITINAVAPGFIET 395
Query: 191 QM 192
           QM
Sbjct: 396 QM 397

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 19/181 (10%)
Query: 13  NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWART 72
           N  GGD+   G G    +K+   E I     K  AN DS+++    V+T           
Sbjct: 60  NDLGGDFKGVGKGSLAADKVV--EEIRRRGGKAVANYDSVEEGEKVVKT----------- 106
Query: 73  RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
             A+   G +DV++NNA + R   F  I +E+  D I  V+++    +++   + M   K
Sbjct: 107 --ALDAFGRIDVVVNNAGILRDRSFARISDEDW-DIIHRVHLRGSFQVTRAAWEHMKKQK 163
Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV--VMT 190
             G I+  SS +G     G   YSA+K  L  +  ++A+E    NI  N++ P     MT
Sbjct: 164 Y-GRIIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAPNAGSRMT 222
Query: 191 Q 191
           Q
Sbjct: 223 Q 223

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 6/171 (3%)
Query: 23  GIGRCIVEKLSQHEAII-IALSKTQANLDSLKQAFPNVQTVQVDL--QDW--ARTRAAVS 77
           GIGR   E   +  A + IA    +    +  +  P    VQ D+  QD   A   A V 
Sbjct: 19  GIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQXDVTRQDSIDAAIAATVE 78
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G +D+L+NNAA+      ++I  E+  + +F +N+   +   Q  ++  I     G I
Sbjct: 79  HAGGLDILVNNAALFDLAPIVEITRESY-EKLFAINVAGTLFTLQAAARQXIAQGRGGKI 137
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
           +N +S AG+       IY A+KAA+ S+T++  L+L  + I VN++ P VV
Sbjct: 138 INXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVV 188

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 99/205 (48%), Gaps = 17/205 (8%)
Query: 23  GIGRCIVEKL-SQHEAIIIALSKTQANLDSLKQAFPNV----QTVQVDL---QDWAR-TR 73
           G+G+ + EKL ++  ++ +        ++++K+ + +V    Q VQ D+   +D  +   
Sbjct: 18  GLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVE 77
Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDID-EENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            A+S  G +D LINNA    F+R   +D EE+  + +   N+ AV ++ ++V   M    
Sbjct: 78  EAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN 137
Query: 133 IQGSIVNVSSIAGKTALEG---HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
             G I+N     G  +  G    + ++A+K  L S+T+T+A E   Y I  N V P  ++
Sbjct: 138 F-GRIINYG-FQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDII 195
Query: 190 TQMGRTGWSDPAKAGPMLAKTPLGR 214
            +M      +  +       TP+GR
Sbjct: 196 GEMKEATIQEARQLKEH--NTPIGR 218

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/177 (29%), Positives = 92/177 (51%), Gaps = 19/177 (10%)
Query: 23  GIGRCIVEKLSQHEAIIIALS---KTQANL-DSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG  +V+ L ++ A ++++S   K+  N+ D  K    N + V+  ++   +      K
Sbjct: 25  GIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTK------K 78
Query: 79  VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI---QG 135
            G +D+L+NNA + ++   L +    +   I DVN+    N S +++K  I   +    G
Sbjct: 79  YGRIDILVNNAGIEQYSP-LHLTPTEIWRRIIDVNV----NGSYLMAKYTIPVMLAIGHG 133
Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           SI+N++S+    A +    Y  SK AL  +TR++A++  P  IR N+V P  +MT M
Sbjct: 134 SIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPM 189

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 10/145 (6%)
Query: 79  VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
           +GP+  LI NA V+      ++  E+    ++DVN+  V N  + V+K  +  + +GSIV
Sbjct: 90  LGPISGLIANAGVSVVKPATELTHEDFA-FVYDVNVFGVFNTCRAVAKLWLQKQQKGSIV 148
Query: 139 NVSS----IAGKTALEG---HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
             SS    I  +++L G      Y++SKAA  ++ + +A E     IRVN++ P  V T 
Sbjct: 149 VTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTD 208
Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFA 216
             +T   D        +  PL RFA
Sbjct: 209 --QTAHMDKKIRDHQASNIPLNRFA 231

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 20/191 (10%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           GIG+ I  +L+   A +I          +   +     + +  D+ D    +A  +++  
Sbjct: 17  GIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQA 76
Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G +D+L+NNA++  F  + D+D ++    I DVN+     +++  +  M   +  G  
Sbjct: 77  LTGGIDILVNNASIVPFVAWDDVDLDHW-RKIIDVNLTGTFIVTRAGTDQM---RAAGKA 132
Query: 138 VNVSSIAGKTALEG---HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
             V SIA  T   G      Y A+K  +   TR +A ELG YNI  N+V P ++      
Sbjct: 133 GRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIE----- 187
Query: 195 TGWSDPAKAGP 205
              SD  KA P
Sbjct: 188 ---SDGVKASP 195

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           AV+  G +D+ ++N+ V  F    D+ EE   D +F +N +    +++   + + +    
Sbjct: 90  AVAHFGHLDIAVSNSGVVSFGHLKDVTEEEF-DRVFSLNTRGQFFVAREAYRHLTE---G 145
Query: 135 GSIVNVSSIAGKT-ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           G IV  SS   K  ++  H++YS SK A+DS  R  + + G   I VN+V P   +T M
Sbjct: 146 GRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM 204

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 93/212 (43%), Gaps = 19/212 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANL----DSLKQAFPNVQTVQVDLQD----WARTRA 74
           GIG  +   L+     +   ++   N+    D L+ A  +V     D+       A   A
Sbjct: 35  GIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAA 94
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINIS-QVVSKTMIDHKI 133
           AV + GP+ +L+N+A         D+D+    D + D N+  V  ++ +V+    +    
Sbjct: 95  AVERFGPIGILVNSAGRNGGGETADLDDALWAD-VLDTNLTGVFRVTREVLRAGGMREAG 153
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN++S  GK  +     Y+ASK  +   T+++  EL    I VN+V P  V T M 
Sbjct: 154 WGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMA 213
Query: 194 ---RTGW------SDPAKAGPMLAKTPLGRFA 216
              R G+      ++        AK PLGR++
Sbjct: 214 ERVREGYARHWGVTEQEVHERFNAKIPLGRYS 245

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQ---DWARTRAAVSKV 79
           GIG      L      +  +++ +  L +L         +  D++   DWAR  AA+ + 
Sbjct: 16  GIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEA 75
Query: 80  -GPVDVLINNAAVARFD--RFLDIDEENLIDSIFDVNIK-AVINISQVVSKTMIDHKIQG 135
            G +  L+NNA V        L ++E  L+    D N+  A + I   V   +   +  G
Sbjct: 76  FGELSALVNNAGVGVMKPVHELTLEEWRLV---LDTNLTGAFLGIRHAVPALL--RRGGG 130
Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
           +IVNV S+AGK   +G   Y+ASK  L  +     L+L   N+RV +V P  V T
Sbjct: 131 TIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDT 185

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 62  VQVDLQDWARTRAAVS----KVGPVDVLINNAAVARFDR--FLDIDEENLIDSIFDVNIK 115
           V+ D+ D     AA++    + G +DVL+NNA +        L        D +  VN++
Sbjct: 57  VRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVR 116
Query: 116 AVINISQVVSKTMIDHKIQGS--IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL 173
            +    + V   M+   +QG+  IVN++S+A   A  G + Y+ SK A+  +T+++A++ 
Sbjct: 117 GIFLGCRAVLPHML---LQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDY 173
Query: 174 GPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTP 211
               IR N+V P ++ T M +     P     +LA+ P
Sbjct: 174 AGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIP 211

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLK---QAFPNVQTVQVDLQDWARTRAAV--- 76
           G G     + ++    ++   + +  L +L     A   V  + +D++D A   AAV   
Sbjct: 32  GFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAXSAAVDNL 91
Query: 77  -SKVGPVDVLINNAAVARFD---RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
             +   +  LINNA +A      +  D+D+    D+  D NIK ++  ++++   +I H 
Sbjct: 92  PEEFATLRGLINNAGLALGTDPAQSCDLDD---WDTXVDTNIKGLLYSTRLLLPRLIAHG 148
Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
              SIVN+ S+AGK    G  +Y  +KA ++  +  +  +L    +RV +++P +  ++ 
Sbjct: 149 AGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEF 208

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 5/120 (4%)
Query: 76  VSKVGPVDVLINNAAVARFDRF--LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           ++K G +D++  N  V     +  L+   E+    + D+N+     +++  ++ MI  K 
Sbjct: 87  IAKHGKLDIMFGNVGVLSTTPYSILEAGNEDF-KRVMDINVYGAFLVAKHAARVMIPAK- 144
Query: 134 QGSIVNVSSIAGKTALEGHT-IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           +GSIV  +SI+  TA EG + +Y+A+K A+  +T ++  ELG Y IRVN V P +V + +
Sbjct: 145 KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPL 204

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 8/190 (4%)
Query: 32  LSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV 91
            ++  A +IA    ++ L  L++ +P +QT  +D+    +     ++V  +DVL N A  
Sbjct: 26  FAREGAKVIATDINESKLQELEK-YPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAGF 84
Query: 92  ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-ALE 150
                 LD +E++  D   ++N++++  + +     M+  K  G+I+N+SS+A     + 
Sbjct: 85  VHHGTVLDCEEKDW-DFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVV 142
Query: 151 GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT---QMGRTGWSDPAKA-GPM 206
              +YS +KAA+  +T+++A +     IR N V P  V T   Q       +P +A    
Sbjct: 143 NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDF 202
Query: 207 LAKTPLGRFA 216
           L +   GRFA
Sbjct: 203 LKRQKTGRFA 212

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Query: 76  VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTM--IDHKI 133
           V K G +DVL+NNA +      +D+ +E   D + +V + +V+  ++   +    +DH  
Sbjct: 96  VEKAGRLDVLVNNAGLGGQTPVVDMTDEEW-DRVLNVTLTSVMRATRAALRYFRGVDHG- 153
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
            G IVN +S+ G  A    + Y+A+KA + ++TR  A+E   + +R+N+V P++
Sbjct: 154 -GVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSI 206

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 37  AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS----KVGPVDVLINNAAVA 92
           A ++   K ++   +L+Q  P    +  D+      +  VS    + G +D ++NNA   
Sbjct: 34  ARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHH 93
Query: 93  RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGH 152
              +  +         + ++N+     ++++    +   K QG+++N+SS+ G       
Sbjct: 94  PPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYL--RKSQGNVINISSLVGAIGQAQA 151
Query: 153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGP------- 205
             Y A+K A+ ++T+ +AL+  PY +RVN + P  + T +    W + A   P       
Sbjct: 152 VPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPL----WEELAALMPDPRASIR 207
Query: 206 --MLAKTPLGRFA 216
             MLA+ PLGR  
Sbjct: 208 EGMLAQ-PLGRMG 219

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 28/139 (20%)
Query: 68  DWARTRAAVSK-VGPVDVLINNAAV-----------ARFDRFLDIDEENLIDSIFDVNIK 115
           DW    AAV + +G ++VL+NNA +             F R L I+ E    S+F     
Sbjct: 66  DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTE----SVF----- 116
Query: 116 AVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP 175
             I   Q ++      +  GSI+N++S++    +E +  YSASKAA+ ++TR  AL    
Sbjct: 117 --IGCQQGIAAM---KETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRK 171
Query: 176 --YNIRVNSVQPTVVMTQM 192
             Y IRVNS+ P  + T M
Sbjct: 172 QGYAIRVNSIHPDGIYTPM 190

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           GIG+ I  +L+   A +I          +   +     + +  D+ D    +A  +++  
Sbjct: 17  GIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQA 76
Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH-KIQGS 136
             G +D+L+NNA++  F  + D+D ++    I DVN+        +V++   D  +  G 
Sbjct: 77  LTGGIDILVNNASIVPFVAWDDVDLDHW-RKIIDVNLTGTF----IVTRAGTDQXRAAGK 131
Query: 137 IVNVSSIAGKTALEG---HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
              V SIA  T   G      Y A+K  +   TR +A ELG YNI  N+V P ++     
Sbjct: 132 AGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIE---- 187
Query: 194 RTGWSDPAKAGP 205
               SD  KA P
Sbjct: 188 ----SDGVKASP 195

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 16/180 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG  I E  ++  A ++A+    A  D LK+    V    + L   A    AV K+   
Sbjct: 224 GIGATIAEVFARDGATVVAIDVDGAAED-LKRVADKVGGTALTLDVTADD--AVDKITAH 280
Query: 80  ------GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQ-VVSKTMIDHK 132
                 G VD+L+NNA + R D+ L   +E   D++  VN+ A   +++ +V    I   
Sbjct: 281 VTEHHGGKVDILVNNAGITR-DKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEG 339
Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G ++ +SS+AG     G T Y+ +KA +  +   +A  L    I +N+V P  + T+M
Sbjct: 340 --GRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKM 397

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 80  GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVN 139
           G +  L+NNA V R    + +  E+    + D N+ +     +   K M   +  GS+VN
Sbjct: 106 GGLSYLVNNAGVVRDKLAIKMKTEDF-HHVIDNNLTSAFIGCREALKVMSKSRF-GSVVN 163
Query: 140 VSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD 199
           V+SI G+    G T YSASK  + +++++ A E    NIR NSV P  + T M      D
Sbjct: 164 VASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDM-NANLKD 222
Query: 200 PAKAGPMLAKTPLGRFA 216
             KA   +   PL R  
Sbjct: 223 ELKA-DYVKNIPLNRLG 238

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 26/213 (12%)
Query: 22  PGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQ----TVQVDLQDWARTRAAVS 77
           P +G  +  + ++  A ++  ++T   L+ + +   +      +V  D+ D A+    V 
Sbjct: 21  PALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVD 80
Query: 78  KV----GPVDVLINNA-AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           +     G VDV+INNA  V     F +   E++ D+I ++ +   + + Q  +  + + K
Sbjct: 81  ETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAI-ELTVFGALRLIQGFTPALEESK 139
Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV---- 188
             G++VNV+S+  + +   +  Y  +K+AL ++++T+A ELG   IRVNSV P  +    
Sbjct: 140 --GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGT 197
Query: 189 -----MTQMGRTGWS-----DPAKAGPMLAKTP 211
                  Q G+ G S     + A AG  L + P
Sbjct: 198 LKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLP 230

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 17/197 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL-----KQAFPNVQT-VQVDL---QDWARTR 73
           GIG  +   L Q    ++  ++T  N++ L        +P      + DL   +D     
Sbjct: 43  GIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMF 102
Query: 74  AAV-SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           +A+ S+   VD+ INNA +AR D  L        D +F+VN+ A+   ++   ++M +  
Sbjct: 103 SAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKD-MFNVNVLALSICTREAYQSMKERN 161
Query: 133 I-QGSIVNVSSIAGKTA--LEGHTIYSASKAALDSITRTMALEL--GPYNIRVNSVQPTV 187
           +  G I+N++S++G     L     YSA+K A+ ++T  +  EL     +IR   + P V
Sbjct: 162 VDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGV 221
Query: 188 VMTQMG-RTGWSDPAKA 203
           V TQ   +    DP KA
Sbjct: 222 VETQFAFKLHDKDPEKA 238

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           AV+  G +D+ ++N+ V  F    D+ EE   D +F +N +    +++   + + +    
Sbjct: 90  AVAHFGHLDIAVSNSGVVSFGHLKDVTEEEF-DRVFSLNTRGQFFVAREAYRHLTE---G 145
Query: 135 GSIVNVSSIAGKT-ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           G IV  SS   K  ++  H+++S SK A+DS  R  + + G   I VN+V P   +T M
Sbjct: 146 GRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM 204

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 14/203 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQAN---LDSLKQAFPNVQTVQVDLQDW---ARTRAAV 76
           GIGR I    ++  A ++A  +T       D +     + + V  DL D    A     +
Sbjct: 42  GIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEEL 101
Query: 77  SKVGPVDVLINNAAV-ARFDRFLDIDEENL--IDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +    VDVL+NNA + AR       +E +L     +  VN+ A   +S+     M+ H  
Sbjct: 102 AATRRVDVLVNNAGIIAR----APAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG- 156
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IV ++S+           Y+ASK A+  +TR +A E     + VN++ P  V+T   
Sbjct: 157 SGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANT 216
Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
               +D  +A  + A+ P GR+A
Sbjct: 217 AALRADDERAAEITARIPAGRWA 239

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 13/201 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTR----AAVSK 78
           GIGR  +E  ++  A ++A    +  L    +A      V  D+ D A        A++ 
Sbjct: 16  GIGRATLELFAKEGARLVACDIEEGPLREAAEAV-GAHPVVXDVADPASVERGFAEALAH 74
Query: 79  VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
           +G +D +++ A + R +       E+  + +  VN+     +++  S+   + K  GSIV
Sbjct: 75  LGRLDGVVHYAGITRDNFHWKXPLEDW-ELVLRVNLTGSFLVAKAASEAXRE-KNPGSIV 132
Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS 198
             +S      L G   Y+AS A +  +TRT+ALELG + IRVN++ P  + T   R    
Sbjct: 133 LTASRVYLGNL-GQANYAASXAGVVGLTRTLALELGRWGIRVNTLAPGFIET---RXTAK 188
Query: 199 DPAKA-GPMLAKTPLGRFAGK 218
            P K     +A TPLGR AGK
Sbjct: 189 VPEKVREKAIAATPLGR-AGK 208

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 86/207 (41%), Gaps = 45/207 (21%)
Query: 24  IGRCIVEKL-SQHEAIIIALSKTQANLDSLKQAF----PNVQ-TVQVDLQDWAR------ 71
           +GR I E L ++  A+ +   ++ A  ++L        PN   TVQ DL + A       
Sbjct: 58  LGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGA 117
Query: 72  ---------TRAA------VSKVGPVDVLINNAAVARFDRFLDIDE-------------E 103
                    TR A       +  G  DVL+NNA+       L  DE             E
Sbjct: 118 DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAME 177
Query: 104 NLIDSIFDVNIKA----VINISQVVSKTMIDHK-IQGSIVNVSSIAGKTALEGHTIYSAS 158
                +F  N  A    +   +  V+ T   H+    SI+N+        L G+TIY+ +
Sbjct: 178 TATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMA 237
Query: 159 KAALDSITRTMALELGPYNIRVNSVQP 185
           K AL+ +TR+ ALEL P  IRVN V P
Sbjct: 238 KGALEGLTRSAALELAPLQIRVNGVGP 264

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 11/177 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD----SLKQAFP-NVQTVQVDLQDWARTRAAVS 77
           GIG  I E  ++  A I+ +++    L     SLK+ F   V  V VD+       A V 
Sbjct: 18  GIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVE 77
Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            V    G  D+L+NNA     +  ++  +E      +++++ A + +++ +   M   + 
Sbjct: 78  SVRSSFGGADILVNNAGTGSNETIMEAADEKW-QFYWELHVMAAVRLARGLVPGM-RARG 135
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            G+I++ +SI     L    IY+ +KAAL   ++T+A E+   NIRVN + P +++T
Sbjct: 136 GGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILT 192

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQ--AFPNVQTVQVDLQDWARTRAAVSKV 79
           GIG+ I + L +  A + I     +A  D+  +  A+ + Q +  DL   A  R     +
Sbjct: 40  GIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQAL 99
Query: 80  GPV----DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVIN-ISQVVS--KTMIDHK 132
           G +    D+L+NNA  + +   L+    +  + +  +N+ +V + I Q++   +     +
Sbjct: 100 GELSARLDILVNNAGTS-WGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAE 158
Query: 133 IQGSIVNVSSIAGKTAL-EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
               ++N+ S+AG +A+ E    Y  SKAAL  ++R +A EL   +I VN + P    ++
Sbjct: 159 NPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSR 218
Query: 192 MGRTGWSDPAKAGPMLAKTPLGRF 215
           M R   +DP       A  P+GR+
Sbjct: 219 MTRHIANDPQALEADSASIPMGRW 242

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 86/207 (41%), Gaps = 45/207 (21%)
Query: 24  IGRCIVEKL-SQHEAIIIALSKTQANLDSLKQAF----PNVQ-TVQVDLQDWAR------ 71
           +GR I E L ++  A+ +   ++ A  ++L        PN   TVQ DL + A       
Sbjct: 21  LGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGA 80
Query: 72  ---------TRAA------VSKVGPVDVLINNAAVARFDRFLDIDE-------------E 103
                    TR A       +  G  DVL+NNA+       L  DE             E
Sbjct: 81  DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAME 140
Query: 104 NLIDSIFDVNIKA----VINISQVVSKTMIDHK-IQGSIVNVSSIAGKTALEGHTIYSAS 158
                +F  N  A    +   +  V+ T   H+    SI+N+        L G+TIY+ +
Sbjct: 141 TATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMA 200
Query: 159 KAALDSITRTMALELGPYNIRVNSVQP 185
           K AL+ +TR+ ALEL P  IRVN V P
Sbjct: 201 KGALEGLTRSAALELAPLQIRVNGVGP 227

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 86/207 (41%), Gaps = 45/207 (21%)
Query: 24  IGRCIVEKL-SQHEAIIIALSKTQANLDSLKQAF----PNVQ-TVQVDLQDWAR------ 71
           +GR I E L ++  A+ +   ++ A  ++L        PN   TVQ DL + A       
Sbjct: 18  LGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGA 77
Query: 72  ---------TRAA------VSKVGPVDVLINNAAVARFDRFLDIDE-------------E 103
                    TR A       +  G  DVL+NNA+       L  DE             E
Sbjct: 78  DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAME 137
Query: 104 NLIDSIFDVNIKA----VINISQVVSKTMIDHK-IQGSIVNVSSIAGKTALEGHTIYSAS 158
                +F  N  A    +   +  V+ T   H+    SI+N+        L G+TIY+ +
Sbjct: 138 TATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMA 197
Query: 159 KAALDSITRTMALELGPYNIRVNSVQP 185
           K AL+ +TR+ ALEL P  IRVN V P
Sbjct: 198 KGALEGLTRSAALELAPLQIRVNGVGP 224

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 90/204 (44%), Gaps = 30/204 (14%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLK-QAFPNVQTVQVDLQDWART----RAAVS 77
           GIG  +V         ++A S+      S+K  A P++ TV  D+          R  + 
Sbjct: 39  GIGAGLVRAYRDRNYRVVATSR------SIKPSADPDIHTVAGDISKPETADRIVREGIE 92
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH------ 131
           + G +D L+NNA V     F++  +E+  D    VN+    +I+Q  +   +        
Sbjct: 93  RFGRIDSLVNNAGVFLAKPFVEXTQEDY-DHNLGVNVAGFFHITQRAAAEXLKQGSGHIV 151
Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
            I  S+V+   +   +AL      S +K  L+++TR++A E     +RVN+V P V+ T 
Sbjct: 152 SITTSLVDQPXVGXPSALA-----SLTKGGLNAVTRSLAXEFSRSGVRVNAVSPGVIKTP 206
Query: 192 MGRTGWSDPAKAGPMLAK-TPLGR 214
                   PA+    LA   P+GR
Sbjct: 207 X------HPAETHSTLAGLHPVGR 224

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 13/189 (6%)
Query: 23  GIGRCIVEKL-SQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTR---- 73
           GIG  I  +L S    ++I  +   A  +     ++ A     T Q D+ D A  R    
Sbjct: 38  GIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFA 97
Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            A    G VDVL+NNA +       +  +  + D +  VN+K   N  +  ++ +   ++
Sbjct: 98  TAEEAFGGVDVLVNNAGIXPLTTIAETGDA-VFDRVIAVNLKGTFNTLREAAQRL---RV 153
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N S+         + IY+A+KA +++ T  ++ EL   +I VN+V P    T + 
Sbjct: 154 GGRIINXSTSQVGLLHPSYGIYAAAKAGVEAXTHVLSKELRGRDITVNAVAPGPTATDLF 213
Query: 194 RTGWSDPAK 202
             G SD  +
Sbjct: 214 LEGKSDEVR 222

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 86/207 (41%), Gaps = 45/207 (21%)
Query: 24  IGRCIVEKL-SQHEAIIIALSKTQANLDSLKQAF----PNVQ-TVQVDLQDWAR------ 71
           +GR I E L ++  A+ +   ++ A  ++L        PN   TVQ DL + A       
Sbjct: 37  LGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGA 96
Query: 72  ---------TRAA------VSKVGPVDVLINNAAVARFDRFLDIDE-------------E 103
                    TR A       +  G  DVL+NNA+       L  DE             E
Sbjct: 97  DGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAME 156
Query: 104 NLIDSIFDVNIKA----VINISQVVSKTMIDHK-IQGSIVNVSSIAGKTALEGHTIYSAS 158
                +F  N  A    +   +  V+ T   H+    SI+N+        L G+TIY+ +
Sbjct: 157 TATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMA 216
Query: 159 KAALDSITRTMALELGPYNIRVNSVQP 185
           K AL+ +TR+ ALEL P  IRVN V P
Sbjct: 217 KGALEGLTRSAALELAPLQIRVNGVGP 243

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 64  VDLQDWARTRA----AVSKVGPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVI 118
           VDL +    RA     +   G +D++ NNAA +   D  +     ++ D  F VN +  +
Sbjct: 64  VDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTM 123
Query: 119 NISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNI 178
            + +     +I     G+IVN+SS     A +  T Y+ +KAA++++TR +A + G + +
Sbjct: 124 LMCKYAIPRLISAG-GGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGV 182
Query: 179 RVNSVQPTVVMTQMGRTGWSDP 200
           R N++ P +V T     G   P
Sbjct: 183 RCNAIAPGLVRTPRLEVGLPQP 204

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 86/180 (47%), Gaps = 12/180 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIAL------SKTQANLDSLKQAFPNVQTVQVDLQDWARTRAA- 75
           GIGR I  +L+  +   I +      +  Q  L+++     N + +  D+ +  + R   
Sbjct: 37  GIGRAIARQLAA-DGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVL 95
Query: 76  ---VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
              +++ G    +++NA +AR   F  +  ++  D++   N+ +  N+ Q     MI  +
Sbjct: 96  EHEIAQHGAWYGVVSNAGIARDAAFPALSNDDW-DAVIHTNLDSFYNVIQPCIMPMIGAR 154
Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G I+ +SS++G     G   YSA+KA +   T+ +A+EL    I VN + P ++ T M
Sbjct: 155 QGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGM 214

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 92/185 (49%), Gaps = 20/185 (10%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL----KQAFPNVQTVQVDLQD----WARTRA 74
           GIG  I  +L    A I+  ++ QA ++++    + A        +D+ D     A  +A
Sbjct: 15  GIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQA 74
Query: 75  AVSKVGPVDVLINNAAVARFDRF--LDIDE-ENLIDSIFDVNIKAVI-NISQVVSKTMID 130
           AV   G +DVL+NNA V        + +DE E +I    DVNIK V+  I  V+   +++
Sbjct: 75  AVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMI----DVNIKGVLWGIGAVLP--IME 128
Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            +  G I+N+ SI   + +    +Y A+K A+ +I+  +  E    NIRV  V P VV +
Sbjct: 129 AQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCVNPGVVES 186
Query: 191 QMGRT 195
           ++  T
Sbjct: 187 ELAGT 191

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 20/176 (11%)
Query: 23  GIGRCIVEKLSQHEAIII-----ALSKTQANLDSLKQAFPNVQTVQVDLQDWART----R 73
           GIG  I ++L+   A +      A  + QA +  ++QA      ++ D +D        R
Sbjct: 42  GIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIR 101
Query: 74  AAVSKVGPVDVLINNAAV---ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
             V  +G +D+L+N+A +   A  +     D     D +  VN +A     +  S+ + D
Sbjct: 102 ETVEALGGLDILVNSAGIWHSAPLEETTVAD----FDEVXAVNFRAPFVAIRSASRHLGD 157
Query: 131 HKIQGSIVNV-SSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
               G I+ + S++A      G ++YSASKAAL  +T+ +A +LGP  I VN V P
Sbjct: 158 G---GRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHP 210

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 70/123 (56%), Gaps = 5/123 (4%)
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIK-AVINISQVVSKTMIDHKIQG- 135
           + G +D L+NNA +  + + +D      I+    VN+  +++  ++ V +    +  QG 
Sbjct: 101 QFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAAEAVRRXSRLYSGQGG 160
Query: 136 SIVNVSSIAG--KTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           +IVNVSS A    +A + +  Y+ASKAA+D+ T  +A E+    IRVN+V+P ++ T + 
Sbjct: 161 AIVNVSSXAAILGSATQ-YVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLH 219
Query: 194 RTG 196
            +G
Sbjct: 220 ASG 222

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR + + LSQ  A +   ++ +  L      +  V  ++ DL           KV  V
Sbjct: 30  GIGRAVADVLSQEGAEVTICARNEELLKRSGHRYV-VCDLRKDLD------LLFEKVKEV 82
Query: 83  DVLINNAA---VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTM--IDHKIQGSI 137
           D+L+ NA       FD   + D +  IDS+F       +N+ ++V   +  +  K  G I
Sbjct: 83  DILVLNAGGPKAGFFDELTNEDFKEAIDSLF-------LNMIKIVRNYLPAMKEKGWGRI 135
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           V ++S +  + +E     ++++ AL    +T++ E+ PY I VN V P          GW
Sbjct: 136 VAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAP----------GW 185
Query: 198 SDPAKAGPMLAK 209
           ++  +   +L++
Sbjct: 186 TETERVKELLSE 197

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 18/226 (7%)
Query: 16  GGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFP--NVQTVQV--DLQDWA 70
           GGD    GIGR +    ++  A I IA    + + +  KQ      V+ V +  DL D  
Sbjct: 54  GGD---SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQ 110
Query: 71  RTR----AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSK 126
             +      V ++G +++L+NN A     + L+      ++  F +NI +  +    V+K
Sbjct: 111 HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFH----VTK 166
Query: 127 TMIDHKIQGS-IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
             + H  QG  I+N +SI      E    YSA+K A+ + TR+++  L    IRVN V P
Sbjct: 167 AALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAP 226
Query: 186 TVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS 231
             + T +  + + D  K     +  P+ R     +  P   +L  S
Sbjct: 227 GPIWTPLIPSSF-DEKKVSQFGSNVPMQRPGQPYELAPAYVYLASS 271

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Query: 54  QAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVN 113
           QAF     +  + +  A    A+SK+G VD+L+NNA       F D+   +   + +++N
Sbjct: 61  QAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPF-DMPMADFRRA-YELN 118
Query: 114 IKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL 173
           + +  ++SQ+V+  M +    G I+ ++S+A +      T Y++SKAA   + R MA +L
Sbjct: 119 VFSFFHLSQLVAPEM-EKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDL 177
Query: 174 GPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 216
           G  NIRVN + P  ++T   ++  + P     ML  TP+ R  
Sbjct: 178 GEKNIRVNGIAPGAILTDALKSVIT-PEIEQKMLQHTPIRRLG 219

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 14/177 (7%)
Query: 23  GIGRCIVEKLSQHEAII-----IALSKTQANLDSLKQAFPNVQTVQVDLQD----WARTR 73
           GIGR I E+ +   A I     +   + +A + +L +    V TV+ D+       A  +
Sbjct: 18  GIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGR---RVLTVKCDVSQPGDVEAFGK 74
Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
             +S  G  D+L+NNA +     F ++  E      F++N+ +   +++     M     
Sbjct: 75  QVISTFGRCDILVNNAGIYPLIPFDELTFEQW-KKTFEINVDSGFLMAKAFVPGM-KRNG 132
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            G I+N++S      +E +T Y ++KAA    TR +A +LG   I VN++ P++V T
Sbjct: 133 WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRT 189

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 87/177 (49%), Gaps = 11/177 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD----SLKQAFP-NVQTVQVDLQDWARTRAAVS 77
           GIG  I E  ++  A I+ +++    L     SLK+ F   V  V VD+       A V 
Sbjct: 18  GIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVE 77
Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            V    G  D+L+NNA     +  ++  +E      +++ + A + +++ +   M   + 
Sbjct: 78  SVRSSFGGADILVNNAGTGSNETIMEAADEKW-QFYWELLVMAAVRLARGLVPGM-RARG 135
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            G+I++ +SI     L    IY+ +KAAL   ++T+A E+   NIRVN + P +++T
Sbjct: 136 GGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILT 192

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 87/187 (46%), Gaps = 17/187 (9%)
Query: 16  GGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFP--NVQTVQV--DLQDWA 70
           GGD    GIGR +    ++  A I IA    + + +  KQ      V+ V +  DL D  
Sbjct: 54  GGD---SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQ 110
Query: 71  RTR----AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSK 126
             +      V ++G +++L+NN A     + L+      ++  F +NI +  +    V+K
Sbjct: 111 HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFH----VTK 166
Query: 127 TMIDHKIQGS-IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
             + H  QG  I+N +SI      E    YSA+K A+ + TR+++  L    IRVN V P
Sbjct: 167 AALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAP 226
Query: 186 TVVMTQM 192
             + T +
Sbjct: 227 GPIWTPL 233

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 16/189 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALS---KTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV 79
           GIGR I E+     + +I LS     +A  D ++    N   V+  +    +      + 
Sbjct: 19  GIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFK------EY 72
Query: 80  GPVDVLINNAAVARFDRFLDIDEENLID--SIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           G + VL+NNA +  + +   I+  ++ +   I DVN+      S+     MI  +   SI
Sbjct: 73  GSISVLVNNAGIESYGK---IESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSI 128
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           VN+SS+      +  + Y  SK A+  +T+++AL+  P  +R N+V P  + T + R   
Sbjct: 129 VNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAA 187
Query: 198 SDPAKAGPM 206
                + PM
Sbjct: 188 ELEVGSDPM 196

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 77  SKVGPVDVLINNAAVARFDRFLDIDEENLIDSI--------FDVNI-KAVINISQVVSKT 127
           +++G +  L+NNA V        +D+   +D I        F++N+  + +   + V + 
Sbjct: 99  AQLGRLSALVNNAGV--------VDQTTRVDGITLERLQRXFEINVFGSFLCAREAVKRX 150
Query: 128 MIDHKIQG-SIVNVSSIAGKTALEGHTI-YSASKAALDSITRTMALELGPYNIRVNSVQP 185
              +   G SIVNVSS A +    G  + Y+A+K A+D+ T  +A E+    IRVN+V+P
Sbjct: 151 STRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVATEGIRVNAVRP 210
Query: 186 TVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLL 229
            ++ T +  +G   P +A  +  + P  R     +      WLL
Sbjct: 211 GIIETDIHASGGL-PNRARDVAPQVPXQRAGTAREVAEAIVWLL 253

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD----SLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG  +   L+   A ++  + +QA+ +    S K+     + + +++ D    +   ++
Sbjct: 16  GIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLNISDIESIQNFFAE 75
Query: 79  VGP----VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           +      +D+L+NNA + R D       E+   S+ + N+ ++   S+   +     K  
Sbjct: 76  IKAENLAIDILVNNAGITR-DNLXXRXSEDEWQSVINTNLSSIFRXSKECVRGX-XKKRW 133
Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
           G I+++ S+ G     G T Y A+KA +   ++++A E+   NI VN V P  + T
Sbjct: 134 GRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIAT 189

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 16/189 (8%)
Query: 23  GIGRCIVEKLSQHEAIIIALS---KTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV 79
           GIGR I E+     + +I LS     +A  D ++    N   V+  +    +      + 
Sbjct: 26  GIGRAIAERFVDEGSKVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFK------EY 79
Query: 80  GPVDVLINNAAVARFDRFLDIDEENLID--SIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           G + VL+NNA +  + +   I+  ++ +   I DVN+      S+     MI  +   SI
Sbjct: 80  GSISVLVNNAGIESYGK---IESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSI 135
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           VN+SS+      +  + Y  SK A+  +T+++AL+  P  +R N+V P  + T + R   
Sbjct: 136 VNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAA 194
Query: 198 SDPAKAGPM 206
                + PM
Sbjct: 195 ELEVGSDPM 203

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 7/154 (4%)
Query: 43  SKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLINNAAVARFDRFL 98
            K +A  D L  A   V  +++D+ D     AAV+     +G +D+L+NNA +       
Sbjct: 42  EKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVE 101
Query: 99  DIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS 158
           D D  +    + D N+  ++ +++     ++  K  G++V +SSIAG+  +    +Y A+
Sbjct: 102 DADTTDWT-RMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGRVNVRNAAVYQAT 158
Query: 159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           K  +++ + T+  E+    +RV  ++P    T++
Sbjct: 159 KFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL 192

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 17/177 (9%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF--PNVQTVQVDL---QDWARTRAAVS 77
           GIG+ +VE L Q++      + T  N+D ++Q+F   N++ ++ DL   QD       + 
Sbjct: 15  GIGKAVVELLLQNK------NHTVINID-IQQSFSAENLKFIKADLTKQQDITNVLDIIK 67
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
            V   D +  NA +       DID E+ I  + D+N+ + I   + +   +   K+  SI
Sbjct: 68  NV-SFDGIFLNAGILIKGSIFDIDIES-IKKVLDLNVWSSIYFIKGLENNL---KVGASI 122
Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           V   S     A      Y+ SK A+   T+++AL+L  Y IRVN+V P  V T + R
Sbjct: 123 VFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALDLAKYQIRVNTVCPGTVDTDLYR 179

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 31/159 (19%)
Query: 78  KVGPVDVLINNAAVARFD----RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           K G +D L++    +  D    R++D  E N  +++  +++ ++  +S+   K M D   
Sbjct: 106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTML-ISVYSLTAVSRRAEKLMAD--- 161
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            GSI+ ++    +  +  + +   +KAAL++  + +A++LGP NIRVN++          
Sbjct: 162 GGSILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAIS--------- 212
Query: 194 RTGWSDPAKAGPM--LAKTPLGRFAGKLKPKPWNRWLLP 230
                    AGP+  LA + +G F   LK   WN +  P
Sbjct: 213 ---------AGPIKTLAASGIGDFRYILK---WNEYNAP 239

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 65/143 (45%), Gaps = 9/143 (6%)
Query: 77  SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
           ++ G +DVL  NA         ++ EE   D  FD N+K V+     V K +       S
Sbjct: 99  AEAGRIDVLFVNAGGGSXLPLGEVTEEQY-DDTFDRNVKGVLF---TVQKALPLLARGSS 154
Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT-VVMTQMGRT 195
           +V   S AG T     ++Y+ASKAAL S  R   L+L    IR+N++ P     T +   
Sbjct: 155 VVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVEL 214
Query: 196 GWSDPAKAGPML----AKTPLGR 214
              DP +   +L    A+ P GR
Sbjct: 215 AGKDPVQQQGLLNALAAQVPXGR 237

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQ-AFPN-VQTVQVDLQD---WARTRAAV 76
           GIG  I  K  +  A ++I    +     + K    P+ +Q  Q D  D   W +   A 
Sbjct: 17  GIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDAT 76
Query: 77  SKV-GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
            K  GPV  L+NNA +A  ++ ++         +  VN+  V   +++  + M +  +  
Sbjct: 77  EKAFGPVSTLVNNAGIA-VNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGA 135
Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALE--LGPYNIRVNSVQPTVVMTQM 192
           SI+N+SSI G         Y+ASK A+  ++++ AL+  L  Y++RVN+V P  + T +
Sbjct: 136 SIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL 194

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 76  VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
           +SK G VD+L+NNA +    +  ++ E    D I  VN++ V  ++  +     ++  +G
Sbjct: 78  LSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKG 137
Query: 136 S---IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
               I+NV+S            Y+A+K  + S+T+ +A+EL P  IRV ++ P    T +
Sbjct: 138 QECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPL 197

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNV------QTVQVDLQD---WARTR 73
           GIG  I  K  +  A ++    T  + D  ++A  +V      Q  Q D  D   W +  
Sbjct: 17  GIGLAIATKFVEEGAKVMI---TDRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLF 73
Query: 74  AAVSKV-GPVDVLINNAAVARFDRFLDIDEENLID--SIFDVNIKAVINISQVVSKTMID 130
            A  K  GPV  L+NNA +A       ++E    +   +  VN+  V   +++  + M +
Sbjct: 74  DATEKAFGPVSTLVNNAGIAVNKS---VEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKN 130
Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALE--LGPYNIRVNSVQPTVV 188
             +  SI+N+SSI G         Y+ASK A+  ++++ AL+  L  Y++RVN+V P  +
Sbjct: 131 KGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYI 190
Query: 189 MTQM 192
            T +
Sbjct: 191 KTPL 194

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 53/124 (42%), Gaps = 18/124 (14%)
Query: 80  GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTM--------IDH 131
           G  DVL+NNA+       L  DE+  +  + D             S  M          H
Sbjct: 101 GRCDVLVNNASSFYPTPLLRKDEDGHVPCVGDREAMEAAAADLFGSNAMAPYFLIKAFAH 160
Query: 132 KIQG----------SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVN 181
           ++            SIVN+        L G+TIY+ +K AL+ +TR+ ALEL P  IRVN
Sbjct: 161 RVADTPAEQRGTNYSIVNMVDAMTSQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVN 220
Query: 182 SVQP 185
            V P
Sbjct: 221 GVGP 224

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 86/186 (46%), Gaps = 20/186 (10%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANL----DSLKQAFPNVQ---TVQVDLQDWARTRAA 75
           GIG  I   L+     ++ +++++ NL    D + ++  +VQ    + +D+ D  +    
Sbjct: 18  GIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLPLDITDCTKADTE 77
Query: 76  V----SKVGPVDVLINNAAVARFDRFLDIDEENLIDS---IFDVNIKAVINISQVVSKTM 128
           +     K G VD+L+N AA      F D      +D+   I ++N+ A   I + V++  
Sbjct: 78  IKDIHQKYGAVDILVNAAAX-----FXDGSLSEPVDNFRKIXEINVIAQYGILKTVTEIX 132
Query: 129 IDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
              K  G I NV+S A K       IY ++K AL  +  ++  EL P  IRV ++ P  V
Sbjct: 133 KVQK-NGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWV 191
Query: 189 MTQMGR 194
            T   +
Sbjct: 192 NTDXAK 197

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENL-----IDSIFDVNIKAVINISQVVSKTMI 129
           A  K G VDV +N A +A   +  ++ +           + DVN+    N+ ++V+  M 
Sbjct: 80  AKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMG 139
Query: 130 DHK-----IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQ 184
            ++      +G I+N +S+A      G   YSASK  +  +T  +A +L P  IRV ++ 
Sbjct: 140 QNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIA 199
Query: 185 PTVVMTQM 192
           P +  T +
Sbjct: 200 PGLFGTPL 207

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENL-----IDSIFDVNIKAVINISQVVSKTMI 129
           A  K G VDV +N A +A   +  ++ +           + DVN+    N+ ++V+  M 
Sbjct: 78  AKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMG 137
Query: 130 DHK-----IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQ 184
            ++      +G I+N +S+A      G   YSASK  +  +T  +A +L P  IRV ++ 
Sbjct: 138 QNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIA 197
Query: 185 PTVVMTQM 192
           P +  T +
Sbjct: 198 PGLFGTPL 205

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 7/154 (4%)
Query: 43  SKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLINNAAVARFDRFL 98
            K +A  D L  A   V  +++D+ D     AAV+     +G +D+L+NNA +       
Sbjct: 42  EKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIXLLGPVE 101
Query: 99  DIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS 158
           D D  +    I D N+  +   ++     ++  K  G++V  SSIAG+  +    +Y A+
Sbjct: 102 DADTTDWTRXI-DTNLLGLXYXTRAALPHLLRSK--GTVVQXSSIAGRVNVRNAAVYQAT 158
Query: 159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           K  +++ + T+  E+    +RV  ++P    T++
Sbjct: 159 KFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL 192

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 23/176 (13%)
Query: 13  NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWART 72
           N  GGD+   G G    +K+   E I     K  AN DS++     V+T           
Sbjct: 39  NDLGGDFKGVGKGSSAADKVV--EEIRRRGGKAVANYDSVEAGEKLVKT----------- 85
Query: 73  RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
             A+   G +DV++NNA + R   F  I +E+     +D+  +  +  S  V++   DH 
Sbjct: 86  --ALDTFGRIDVVVNNAGILRDRSFSRISDED-----WDIIQRVHLRGSFQVTRAAWDHX 138
Query: 133 IQ---GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
            +   G I+  +S +G     G   YSA+K  L  +  T+ +E    NI  N++ P
Sbjct: 139 KKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAP 194

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 10/128 (7%)
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENL-----IDSIFDVNIKAVINISQVVSKTMI 129
           A  K G VDV +N A +A   +  ++ +           + DVN+    N+ ++V+  M 
Sbjct: 78  AKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMG 137
Query: 130 DHK-----IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQ 184
            ++      +G I+N +S+A      G   YSASK  +  +T  +A +L P  IRV ++ 
Sbjct: 138 QNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIA 197
Query: 185 PTVVMTQM 192
           P +  T +
Sbjct: 198 PGLFGTPL 205

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 73/154 (47%), Gaps = 8/154 (5%)
Query: 65  DLQDWARTRA----AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINI 120
           DL D A+  A    A  + G VD+L+NNA +           E+  D I  +N+ AV + 
Sbjct: 59  DLSDVAQIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESW-DKIIALNLSAVFHG 117
Query: 121 SQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRV 180
           +++    M   +  G I+N++S+ G     G   Y A+K  +  +T+ + LE    N+  
Sbjct: 118 TRLALPGM-RARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTC 176
Query: 181 NSVQPTVVMTQMGRTGWSDPAKAG--PMLAKTPL 212
           N++ P  V+T + +    D A  G  P+ A+  L
Sbjct: 177 NAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDL 210

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 16/168 (9%)
Query: 59  VQTVQVDLQDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEE---NLIDSIFD 111
           V  +Q D++D    +  VS++    G  +++INNAA      F+   E    N   +I D
Sbjct: 78  VHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAA----GNFISPTERLSPNAWKTITD 133
Query: 112 VNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS-KAALDSITRTMA 170
           + +     ++  + K +I  +   + +++++I  +T   G  + SAS KA ++++++++A
Sbjct: 134 IVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG-SGFVVPSASAKAGVEAMSKSLA 192
Query: 171 LELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKA--GPMLAKTPLGRFA 216
            E G Y +R N +QP  + T+ G     DP       M+ + P GR  
Sbjct: 193 AEWGKYGMRFNVIQPGPIKTK-GAFSRLDPTGTFEKEMIGRIPCGRLG 239

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD----SLKQAFPN--VQTVQVDLQDWARTRAAV 76
           GIG+ I   L    A ++   + + N++     ++  +P+  +Q V  DL      +  +
Sbjct: 21  GIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI 80
Query: 77  SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
            K   VD+LINN  +     + DI +E+    +F+VNI + + +++   K  I+ K +G 
Sbjct: 81  EKYPKVDILINNLGIFEPVEYFDIPDEDWF-KLFEVNIXSGVRLTRSYLKKXIERK-EGR 138
Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMA 170
           ++ ++S A     +    YSA+K    S++R++A
Sbjct: 139 VIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLA 172

>pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 18/194 (9%)
Query: 49  LDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLINNAAVARFD----RFLDI 100
           L+ L Q  P     Q+D+Q          +    VG +D + ++ A A  +    RF + 
Sbjct: 73  LEQLNQ--PEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSET 130
Query: 101 DEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA 160
             E  + +  D++  ++  ++    K M +    GSIV  + + G+ A++ + +   +KA
Sbjct: 131 SREGFLLAQ-DISSYSLTIVAHEAKKLMPE---GGSIVATTYLGGEFAVQNYNVMGVAKA 186
Query: 161 ALDSITRTMALELGPYNIRVNSVQ--PTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGK 218
           +L++  + +AL+LGP NIRVN++   P   ++  G  G++   K   +  + PL R   +
Sbjct: 187 SLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILK--EIEERAPLKRNVDQ 244
Query: 219 LKPKPWNRWLLPSV 232
           ++      +LL  +
Sbjct: 245 VEVGKTAAYLLSDL 258

>pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 18/194 (9%)
Query: 49  LDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLINNAAVARFD----RFLDI 100
           L+ L Q  P     Q+D+Q          +    VG +D + ++ A A  +    RF + 
Sbjct: 52  LEQLNQ--PEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSET 109
Query: 101 DEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA 160
             E  + +  D++  ++  ++    K M +    GSIV  + + G+ A++ + +   +KA
Sbjct: 110 SREGFLLAQ-DISSYSLTIVAHEAKKLMPE---GGSIVATTYLGGEFAVQNYNVMGVAKA 165
Query: 161 ALDSITRTMALELGPYNIRVNSVQ--PTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGK 218
           +L++  + +AL+LGP NIRVN++   P   ++  G  G++   K   +  + PL R   +
Sbjct: 166 SLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILK--EIKERAPLKRNVDQ 223
Query: 219 LKPKPWNRWLLPSV 232
           ++      +LL  +
Sbjct: 224 VEVGKTAAYLLSDL 237

>pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 18/194 (9%)
Query: 49  LDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLINNAAVARFD----RFLDI 100
           L+ L Q  P     Q+D+Q          +    VG +D + ++ A A  +    RF + 
Sbjct: 78  LEQLNQ--PEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSET 135
Query: 101 DEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA 160
             E  + +  D++  ++  ++    K M +    GSIV  + + G+ A++ + +   +KA
Sbjct: 136 SREGFLLAQ-DISSYSLTIVAHEAKKLMPE---GGSIVATTYLGGEFAVQNYNVMGVAKA 191
Query: 161 ALDSITRTMALELGPYNIRVNSVQ--PTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGK 218
           +L++  + +AL+LGP NIRVN++   P   ++  G  G++   K   +  + PL R   +
Sbjct: 192 SLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILK--EIEERAPLKRNVDQ 249
Query: 219 LKPKPWNRWLLPSV 232
           ++      +LL  +
Sbjct: 250 VEVGKTAAYLLSDL 263

>pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule In Au) Length = 260

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 18/194 (9%)
Query: 49  LDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLINNAAVARFD----RFLDI 100
           L+ L Q  P     Q+D+Q          +    VG +D + ++ A A  +    RF + 
Sbjct: 56  LEQLNQ--PEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSET 113
Query: 101 DEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA 160
             E  + +  D++  ++  ++    K M +    GSIV  + + G+ A++ + +   +KA
Sbjct: 114 SREGFLLAQ-DISSYSLTIVAHEAKKLMPE---GGSIVATTYLGGEFAVQNYNVMGVAKA 169
Query: 161 ALDSITRTMALELGPYNIRVNSVQ--PTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGK 218
           +L++  + +AL+LGP NIRVN++   P   ++  G  G++   K   +  + PL R   +
Sbjct: 170 SLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILK--EIEERAPLKRNVDQ 227
Query: 219 LKPKPWNRWLLPSV 232
           ++      +LL  +
Sbjct: 228 VEVGKTAAYLLSDL 241

>pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 18/194 (9%)
Query: 49  LDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLINNAAVARFD----RFLDI 100
           L+ L Q  P     Q+D+Q          +    VG +D + ++ A A  +    RF + 
Sbjct: 52  LEQLNQ--PEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSET 109
Query: 101 DEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA 160
             E  + +  D++  ++  ++    K M +    GSIV  + + G+ A++ + +   +KA
Sbjct: 110 SREGFLLAQ-DISSYSLTIVAHEAKKLMPE---GGSIVATTYLGGEFAVQNYNVMGVAKA 165
Query: 161 ALDSITRTMALELGPYNIRVNSVQ--PTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGK 218
           +L++  + +AL+LGP NIRVN++   P   ++  G  G++   K   +  + PL R   +
Sbjct: 166 SLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILK--EIEERAPLKRNVDQ 223
Query: 219 LKPKPWNRWLLPSV 232
           ++      +LL  +
Sbjct: 224 VEVGKTAAYLLSDL 237

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 80/163 (49%), Gaps = 15/163 (9%)
Query: 41  ALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLINNAAVARFDR 96
           ++ K  A L++ + + P V  VQ+D+      + A  +V    GPV +L NNA V   + 
Sbjct: 44  SIDKALATLEA-EGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGV---NL 99
Query: 97  FLDIDEENLIDS--IFDVNIKAVIN-----ISQVVSKTMIDHKIQGSIVNVSSIAGKTAL 149
           F  I+E +  D   +  VN+  V+N     + ++V +     +  G +VN +S+A   A 
Sbjct: 100 FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA 159
Query: 150 EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
               IY+ +K A+  ++ ++   L  Y I V+ + P +V + +
Sbjct: 160 GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYI 202

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 13/138 (9%)
Query: 63  QVDLQDW----ARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVI 118
           Q D++D     A  +A + ++G +D+++ NA +A      D   +     + DVN+  V 
Sbjct: 80  QADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHD-----VIDVNLTGVY 134
Query: 119 NISQVVSKTMIDHKIQGSIVNVSSIAG----KTALEGHTIYSASKAALDSITRTMALELG 174
           +  +V   T++     GSIV +SS AG     +A  G   Y A+K  +  + R  A  L 
Sbjct: 135 HTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLA 194
Query: 175 PYNIRVNSVQPTVVMTQM 192
              IRVNS+ P+ V T M
Sbjct: 195 GQMIRVNSIHPSGVETPM 212

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 61  TVQVDLQDWARTRAAVSK----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKA 116
           + +VD++D A   + V++    +G +D+ I NA ++      +++     D +   N+  
Sbjct: 75  SAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQW-DEVIGTNLTG 133
Query: 117 VINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPY 176
             N    V+  MI     G IV VSS+ G +A      Y +SK  +  +T+  A +L  Y
Sbjct: 134 TFNTIAAVAPGMIKRN-YGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLVGY 192
Query: 177 NIRVNSVQPTVVMTQM 192
            I VN+V P  + T M
Sbjct: 193 GITVNAVAPGNIETPM 208

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 4/116 (3%)
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVIN-ISQVVSKTMIDHKIQGS 136
           + G  D+L+NNA V   ++  D   E   D I  VN+ +  + I   +       K  G 
Sbjct: 101 RFGGADILVNNAGVQFVEKIEDFPVEQW-DRIIAVNLSSSFHTIRGAIPPX--KKKGWGR 157
Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           I+N++S  G  A    + Y A+K  +  +T+T+ALE+    + VNS+ P  V+T +
Sbjct: 158 IINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESGVTVNSICPGYVLTPL 213

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 21/147 (14%)
Query: 61  TVQVDLQDWA---RTRA-AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKA 116
           T +VD++D A   R  A AV++ G +DV++ NA +      L +  +   D+ FDV+   
Sbjct: 75  TAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPV--QAFADA-FDVDFVG 131
Query: 117 VINISQVVSKTMIDHKIQGSIVNVSSIAG-----------KTALEGHTIYSASKAALDSI 165
           VIN        +       SI+   S+AG                G   YS +K  +DS 
Sbjct: 132 VINTVHAALPYLTS---GASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSY 188
Query: 166 TRTMALELGPYNIRVNSVQPTVVMTQM 192
           T  +A +L P +IR N + PT V T M
Sbjct: 189 TLQLAAQLAPQSIRANVIHPTNVNTDM 215

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 14/124 (11%)
Query: 80  GPVDVLINNAAVARFDRFLDIDEEN----------LIDSIFDVNIKAVINISQVVSKTMI 129
           G  DVL+NNA+       L  D+ N           +  +F  N  A + + +  ++   
Sbjct: 93  GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG 152
Query: 130 D----HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
           +         S+VN+        L G  +Y+ +K AL  +TR  ALEL P +IRVN+V P
Sbjct: 153 EGGAWRSRNLSVVNLCDAXTDLPLPGFCVYTXAKHALGGLTRAAALELAPRHIRVNAVAP 212
Query: 186 TVVM 189
            + +
Sbjct: 213 GLSL 216

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQV--DLQDWARTRA----- 74
           GIG  I   L+   A I++      A ++ ++        V+V  D  D ++  A     
Sbjct: 15  GIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLV 74
Query: 75  --AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
             AV ++G +D+L+NNA +       D   E   D+I  +N+ AV + +      M    
Sbjct: 75  DNAVRQMGRIDILVNNAGIQHTALIEDFPTEKW-DAILALNLSAVFHGTAAALPHMKKQG 133
Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
             G I+N++S  G  A    + Y A+K  +   T+  ALE     I  N++ P  V T
Sbjct: 134 F-GRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRT 190

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 47.4 bits (111), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/210 (20%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN-VQTVQVDL--------QDWARTR 73
           G+G     +L+++ A ++  S+ +  L++      + V   QVD+         D  R  
Sbjct: 18  GLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLF 77
Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                +G  D+L+ +    R  RF+++  E+  D  + +  ++ + + +  ++ M++ K 
Sbjct: 78  EKARDLGGADILVYSTGGPRPGRFMELGVEDW-DESYRLLARSAVWVGRRAAEQMVE-KG 135
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT--- 190
            G +V + S+      +   + +  +  +  + RT+ALEL P+ + VN+V P++++T   
Sbjct: 136 WGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRV 195
Query: 191 ------QMGRTGWSDPAKAGPMLAKTPLGR 214
                 +  R+G +       M ++ P+GR
Sbjct: 196 RSLAEERARRSGITVEEALKSMASRIPMGR 225

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 75/171 (43%), Gaps = 12/171 (7%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANL----DSLKQAFP------NVQTVQVDLQDWART 72
           GIG   VE L +  A +   ++    L     +L+Q FP      +V  V   LQ  A  
Sbjct: 19  GIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFA 78
Query: 73  RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            A    +G   +L+NNA   R   F +  +E   + +  +   +VI+  +      ++ +
Sbjct: 79  EACERTLGCASILVNNAGQGRVSTFAETTDEAWSEEL-QLKFFSVIHPVRAF-LPQLESR 136
Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSV 183
              +IV V+S+            SA++A + ++ R+MA E  P  +RVN +
Sbjct: 137 ADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGI 187

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 12/173 (6%)
Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQV--DLQDWARTRA----- 74
           GIG  I   L+   A I++      A ++ ++        V+V  D  D ++  A     
Sbjct: 15  GIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLV 74
Query: 75  --AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
             AV ++G +D+L+NNA +       D   E   D+I  +N+ AV + +      M    
Sbjct: 75  DNAVRQMGRIDILVNNAGIQHTALIEDFPTEKW-DAILALNLSAVFHGTAAALPHMKKQG 133
Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
             G I+N++S  G  A    + Y A+K  +   T+  ALE     I  N++ P
Sbjct: 134 F-GRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICP 185

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 23  GIGRCIVEKLSQ--HEAIIIALSKTQANLDSLKQAFPN-----VQTVQVDLQDWARTRAA 75
           GIG+ IV+ L     + ++  +++++A L  LK+ + +     V  +  D        AA
Sbjct: 13  GIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAA 72
Query: 76  VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
           V   G +D L+ NA V    + ++  + N    ++D+N  +++++  +    +   K  G
Sbjct: 73  VKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPEL--KKTNG 130
Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           ++V VSS A          Y +SKAAL+    T+A E     ++  +V P +V T M
Sbjct: 131 NVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIAVAPGIVDTDM 185

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 12/173 (6%)
Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQV--DLQDWARTRA----- 74
           GIG  I   L+   A I++      A ++ ++        V+V  D  D ++  A     
Sbjct: 15  GIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLV 74
Query: 75  --AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
             AV ++G +D+L+NNA +       D   E   D+I  +N+ AV + +      M    
Sbjct: 75  DNAVRQMGRIDILVNNAGIQHTALIEDFPTEKW-DAILALNLSAVFHGTAAALPHMKKQG 133
Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
             G I+N++S  G  A    + Y A+K  +   T+  ALE     I  N++ P
Sbjct: 134 F-GRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICP 185

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 80  GPVDVLINNAAVARFDR-FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
           G +DV + NA V       +D+D  +  + I  V++  V   S  + K +     +GS++
Sbjct: 110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGK-IFKKNGKGSLI 168
Query: 139 NVSSIAGKTA--LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG 196
             SSI+GK     +    Y+ +KAA   + +++A+E  P+  RVN++ P  + T +  T 
Sbjct: 169 ITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPF-ARVNTISPGYIDTDI--TD 225
Query: 197 WSDPAKAGPMLAKTPLGR 214
           ++           TPLGR
Sbjct: 226 FASKDMKAKWWQLTPLGR 243

>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM Length = 245

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 8/173 (4%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           G+G  IV+ LS+ + I+ AL +   +L +L +    V+ ++ D+         V K+   
Sbjct: 16  GMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-IEGVEPIESDIVKEVLEEGGVDKLKNL 73
Query: 80  GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVN 139
             VD L++ AAVAR D  ++        +  D+N+     +S+ +   +      G ++ 
Sbjct: 74  DHVDTLVHAAAVAR-DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPAL--RAASGCVIY 130
Query: 140 VSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           ++S AG     G+TIY+ASK AL  +      E     IRV++V P    T M
Sbjct: 131 INSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPM 183

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           A+ K+  +DVL+NNA          +  E   D I  V +KA   +S++    +I +K  
Sbjct: 69  AMEKLQRIDVLVNNACRGSKGILSSLLYEEF-DYILSVGLKAPYELSRLCRDELIKNK-- 125
Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
           G I+N++S     +      Y+++K  + ++T  +A+ LGP ++ VN + P
Sbjct: 126 GRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIAP 175

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 14/124 (11%)
Query: 80  GPVDVLINNAAVARFDRFLDIDEEN----------LIDSIFDVNIKAVINISQVVSKTMI 129
           G  DVL+NNA+       L  D+ N           +  +F  N  A + + +  ++   
Sbjct: 93  GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG 152
Query: 130 D----HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
           +         S+VN+        L G  +Y+ +K AL  +TR  ALEL P +IRVN+V P
Sbjct: 153 EGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAP 212
Query: 186 TVVM 189
            + +
Sbjct: 213 GLSL 216

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 28/188 (14%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKT-----------QANLDSLKQAFPNVQTVQVDLQDWAR 71
           GIG+ IV++L +  + ++  S+            QANL   KQA   V  +Q ++++   
Sbjct: 29  GIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQA--RVIPIQCNIRNEEE 86
Query: 72  T----RAAVSKVGPVDVLINNAAVARFDRFLDIDEE---NLIDSIFDVNIKAVINISQVV 124
                ++ +   G ++ L+NN       +FL   E        ++ + N+     + + V
Sbjct: 87  VNNLVKSTLDTFGKINFLVNNGG----GQFLSPAEHISSKGWHAVLETNLTGTFYMCKAV 142
Query: 125 -SKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSV 183
            S  M +H   GSIVN+  +  K          A++A + ++T+++ALE     IR+N V
Sbjct: 143 YSSWMKEHG--GSIVNII-VPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCV 199
Query: 184 QPTVVMTQ 191
            P V+ +Q
Sbjct: 200 APGVIYSQ 207

>pdb|1Z6Z|A Chain A, Crystal Structure Of Human Sepiapterin Reductase In Complex With Nadp+ Length = 282

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 66/123 (53%), Gaps = 8/123 (6%)
Query: 84  VLINNA-AVARFDR-FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH-KIQGSIVNV 140
           +LINNA ++    + F+D+ +   +++ + +N+ +++ ++  V K   D   +  ++VN+
Sbjct: 115 LLINNAGSLGDVSKGFVDLSDSTQVNNYWALNLTSMLCLTSSVLKAFPDSPGLNRTVVNI 174
Query: 141 SSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV---MTQMGRTGW 197
           SS+      +G  +Y A KAA D + + +ALE    N+RV +  P  +   M Q+ R   
Sbjct: 175 SSLCALQPFKGWALYCAGKAARDMLFQVLALE--EPNVRVLNYAPGPLDTDMQQLARETS 232
Query: 198 SDP 200
            DP
Sbjct: 233 VDP 235

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANL----DSLKQAFPNVQTVQVDLQDWARTRAAVS- 77
           GIGR     L+     + AL +T+  +    D +  A      ++ D+ D  + R AV  
Sbjct: 39  GIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQXRNAVRD 98
Query: 78  ---KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
              K G +D+++ NA +      +D  +    D    VN++    ++  ++   +  +  
Sbjct: 99  LVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTF-LTLHLTVPYLKQRGG 157
Query: 135 GSIVNVSSIAGKTALE--GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           G+IV VSSI G       G T Y+A+KAA  +I + +ALELG ++IRVN+V P  + T +
Sbjct: 158 GAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNI 217

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           A+   G VD+L+NNA + R DR L    E   + + DV++K     +Q     M      
Sbjct: 96  AIKAFGRVDILVNNAGILR-DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNY- 153
Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 186
           G I+  SS +G     G   Y+A+K  L  +  T+A+E    N+  N + PT
Sbjct: 154 GRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPT 205

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 80/168 (47%), Gaps = 16/168 (9%)
Query: 59  VQTVQVDLQDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEE---NLIDSIFD 111
           V  +Q D++D    +  VS++    G  +++INNAA      F+   E    N   +I D
Sbjct: 78  VHAIQCDVRDPDXVQNTVSELIKVAGHPNIVINNAA----GNFISPTERLSPNAWKTITD 133
Query: 112 VNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS-KAALDSITRTMA 170
           + +     ++  + K +I  +   + +++++I  +T   G  + SAS KA +++ ++++A
Sbjct: 134 IVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG-SGFVVPSASAKAGVEAXSKSLA 192
Query: 171 LELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKA--GPMLAKTPLGRFA 216
            E G Y  R N +QP  + T+ G     DP        + + P GR  
Sbjct: 193 AEWGKYGXRFNVIQPGPIKTK-GAFSRLDPTGTFEKEXIGRIPCGRLG 239

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFD------VNIKAVINISQVVSKTM 128
           A  K G +DV +N A +A   +    +++N + ++ D      VN+    N+ ++V+  M
Sbjct: 78  AKEKFGRIDVAVNCAGIAVAIKTYH-EKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVM 136
Query: 129 IDHK-----IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSV 183
             ++      +G I+N +S+A      G   YSASK  +  +T  +A +L P  IRV ++
Sbjct: 137 GQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTI 196
Query: 184 QPTVVMTQM 192
            P +  T +
Sbjct: 197 APGLFATPL 205

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 11/199 (5%)
Query: 23  GIGRCIVEKL-SQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGP 81
           GIGR I E L ++   + IA    +    SL  A P    ++ D       + A+  +G 
Sbjct: 13  GIGRAIAEALVARGYRVAIASRNPEEAAQSLG-AVPLPTDLEKD-DPKGLVKRALEALGG 70
Query: 82  VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS 141
           + VL++ AAV      L++  E     ++ +++     ++Q  +  M +    G ++ + 
Sbjct: 71  LHVLVHAAAVNVRKPALELSYEEWRRVLY-LHLDVAFLLAQAAAPHMAEAG-WGRVLFIG 128
Query: 142 SIAGKTALEGHTI----YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           S+   TA  G  +    Y+ +K AL  +TR +A E     IRVN + P  V T+      
Sbjct: 129 SVTTFTA--GGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLR 186
Query: 198 SDPAKAGPMLAKTPLGRFA 216
            +P    P+ A+ P+GR+A
Sbjct: 187 QNPELYEPITARIPMGRWA 205

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFD------VNIKAVINISQVVSKTM 128
           A  K G +DV +N A +A   +    +++N + ++ D      VN+    N+ ++V+  M
Sbjct: 77  AKEKFGRIDVAVNCAGIAVAIKTYH-EKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVM 135
Query: 129 IDHK-----IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSV 183
             ++      +G I+N +S+A      G   YSASK  +  +T  +A +L P  IRV ++
Sbjct: 136 GQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTI 195
Query: 184 QPTVVMTQM 192
            P +  T +
Sbjct: 196 APGLFATPL 204

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFD------VNIKAVINISQVVSKTM 128
           A  K G +DV +N A +A   +    +++N + ++ D      VN+    N+ ++V+  M
Sbjct: 78  AKEKFGRIDVAVNCAGIAVAIKTYH-EKKNQVHTLEDFQRVINVNLIGTFNVIRLVAGVM 136
Query: 129 IDHK-----IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSV 183
             ++      +G I+N +S+A      G   YSASK  +  +T  +A +L P  IRV ++
Sbjct: 137 GQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTI 196
Query: 184 QPTVVMTQM 192
            P +  T +
Sbjct: 197 APGLFATPL 205

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 23/182 (12%)
Query: 23  GIGRCIVEKLSQHEAIIIALS-KTQANLD---SLKQAFPNVQT--VQVDLQDWARTRAAV 76
           GIGR   E L    A +  +    +A +    +L + F   +T  +Q D+ D  + R   
Sbjct: 18  GIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTF 77
Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            KV    G +D+L+NNA V         + E   +    +N+ +VI+ + +    M    
Sbjct: 78  RKVVDHFGRLDILVNNAGV---------NNEKNWEKTLQINLVSVISGTYLGLDYMSKQN 128
Query: 133 --IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYN--IRVNSVQPTVV 188
               G I+N+SS+AG   +    +Y ASK  +   TR+ AL     N  +R+N++ P  V
Sbjct: 129 GGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFV 188
Query: 189 MT 190
            T
Sbjct: 189 NT 190

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 22/162 (13%)
Query: 46  QANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLINNAA------VARFD 95
           QA+L ++  A  +     V +  ++R  A V       G  DVL+NNA+      + R D
Sbjct: 64  QADLSNVATASFSETDGSVPVTLFSRCSALVDACYMHWGRCDVLVNNASSFYPTPLLRKD 123
Query: 96  -----------RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK-IQGSIVNVSSI 143
                        L++   +L  S        +   +Q V+ T  + +    SIVN+   
Sbjct: 124 AGEGGSSVGDKESLEVAAADLFGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDA 183
Query: 144 AGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
                L G+T+Y+ +K AL+ +TR+ ALEL    IRVN V P
Sbjct: 184 MTSQPLLGYTMYTMAKEALEGLTRSAALELASLQIRVNGVSP 225

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 14/137 (10%)
Query: 62  VQVDLQDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAV 117
           ++ D+++  + RAAV+      G +D+L+NNA+       LD   +      FD+  +  
Sbjct: 67  LKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPXKR-----FDLXQQVN 121
Query: 118 INISQVVSKTMIDHKIQGSIVNVSSIAGKTALE-----GHTIYSASKAALDSITRTMALE 172
              S V ++  + H +Q    ++ ++A   +L       HT Y+ +K     +T  +A E
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXSLVTLGLAAE 181
Query: 173 LGPYNIRVNSVQPTVVM 189
            GP  + +N++ P  V+
Sbjct: 182 FGPQGVAINALWPRTVI 198

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 82/178 (46%), Gaps = 35/178 (19%)
Query: 63  QVDLQDWARTRAAVSKV----GPVDVLINNAAVARFD----RFLDIDEENLIDSIFDVNI 114
             D+ D A   A  + +    G +D L++    +  +    R++DI E N   +  ++++
Sbjct: 70  HCDVSDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDISESNFXXTX-NISV 128
Query: 115 KAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELG 174
            ++  +++   K   D    GSI+ ++    +  +  + +   +KAAL++  + +A++LG
Sbjct: 129 YSLTALTKRAEKLXSD---GGSILTLTYYGAEKVVPNYNVXGVAKAALEASVKYLAVDLG 185
Query: 175 PYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPM--LAKTPLGRFAGKLKPKPWNRWLLP 230
           P +IRVN++                   AGP+  LA + +G F   LK   WN +  P
Sbjct: 186 PKHIRVNAIS------------------AGPIKTLAASGIGDFRYILK---WNEYNAP 222

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD-----SLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIGR I   L++  A ++  ++++  L       L+    +   +   ++D       V+
Sbjct: 43  GIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSMEDMTFAEEFVA 102
Query: 78  K----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +    +G +D+LI N  +     F   + +N+  S+ +VN  + + +S V +  M+    
Sbjct: 103 EAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSM-EVNFHSFVVLS-VAAMPMLMQS- 159
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           QGSI  VSS+AGK        YSASK ALD    T+  E       VN V  ++ +  +G
Sbjct: 160 QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF-----LVNKVNVSITLCILG 214

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 67  QDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDS---IFDVNIKAVINISQV 123
           +D  R  A   +  P+  +++ A V   ++ L  +  + ++S   + +VN+    N+ ++
Sbjct: 52  EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 111
Query: 124 VSKTMIDH-----KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNI 178
            +  M ++       +G IVN +S+A      G   Y+ASK  + ++T   A EL  + I
Sbjct: 112 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 171
Query: 179 RVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPL 212
           RV +V P +  T +   G  + AKA  + A+ P 
Sbjct: 172 RVVTVAPGLFDTPL-LQGLPEKAKAS-LAAQVPF 203

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD-----SLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIGR I   L++  A ++  ++++  L       L+    +   +   ++D       V+
Sbjct: 22  GIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSMEDMTFAEEFVA 81
Query: 78  K----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +    +G +D+LI N  +     F   + +N+  S+ +VN  + + +S V +  M+    
Sbjct: 82  EAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSM-EVNFHSFVVLS-VAAMPMLMQS- 138
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           QGSI  VSS+AGK        YSASK ALD    T+  E       VN V  ++ +  +G
Sbjct: 139 QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF-----LVNKVNVSITLCILG 193

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD-----SLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIGR I   L++  A ++  ++++  L       L+    +   +   ++D       V+
Sbjct: 22  GIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSMEDMTFAEEFVA 81
Query: 78  K----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +    +G +D+LI N  +     F   + +N+  S+ +VN  + + +S V +  M+    
Sbjct: 82  EAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSM-EVNFHSFVVLS-VAAMPMLMQS- 138
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           QGSI  VSS+AGK        YSASK ALD    T+  E       VN V  ++ +  +G
Sbjct: 139 QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF-----LVNKVNVSITLCILG 193

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD-----SLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIGR I   L++  A ++  ++++  L       L+    +   +   ++D       V+
Sbjct: 20  GIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAGSMEDMTFAEEFVA 79
Query: 78  K----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +    +G +D+LI N  +     F   + +N+  S+ +VN  + + +S V +  M+    
Sbjct: 80  EAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSM-EVNFHSFVVLS-VAAMPMLMQS- 136
Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           QGSI  VSS+AGK        YSASK ALD    T+  E       VN V  ++ +  +G
Sbjct: 137 QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEF-----LVNKVNVSITLCILG 191

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 43.9 bits (102), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 89/224 (39%), Gaps = 42/224 (18%)
Query: 24  IGRCIVEKLSQ--HEAIIIALSKTQANL---DSLKQAFPNVQTV-QVDLQDWARTRAAVS 77
           IGR I  KL Q  +  +I   +  +A +   D L +   N   V Q DL +     A+  
Sbjct: 35  IGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCE 94
Query: 78  KV--------GPVDVLINNAAVARFDRFLDID-EENLIDSIFDVNIKAVIN---ISQVVS 125
           ++        G  DVL+NNA+       +  D E+N      +  +  +I    I+  + 
Sbjct: 95  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLL 154
Query: 126 KTMIDHKIQG----------SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP 175
                 + +G          SIVN+            ++Y+  K AL  +T++ ALEL P
Sbjct: 155 TMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAP 214
Query: 176 YNIRVNSVQPT-----VVMTQMGRTGWSDPAKAGPMLAKTPLGR 214
           Y IRVN V P      V M +  +  W           K PLGR
Sbjct: 215 YGIRVNGVAPGVSLLPVAMGEEEKDKWRR---------KVPLGR 249

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 89/224 (39%), Gaps = 42/224 (18%)
Query: 24  IGRCIVEKLSQ--HEAIIIALSKTQANL---DSLKQAFPNVQTV-QVDLQDWARTRAAVS 77
           IGR I  KL Q  +  +I   +  +A +   D L +   N   V Q DL +     A+  
Sbjct: 35  IGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCE 94
Query: 78  KV--------GPVDVLINNAAVARFDRFLDID-EENLIDSIFDVNIKAVIN---ISQVVS 125
           ++        G  DVL+NNA+       +  D E+N      +  +  +I    I+  + 
Sbjct: 95  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLL 154
Query: 126 KTMIDHKIQG----------SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP 175
                 + +G          SIVN+            ++Y+  K AL  +T++ ALEL P
Sbjct: 155 TMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAP 214
Query: 176 YNIRVNSVQPT-----VVMTQMGRTGWSDPAKAGPMLAKTPLGR 214
           Y IRVN V P      V M +  +  W           K PLGR
Sbjct: 215 YGIRVNGVAPGVSLLPVAMGEEEKDKWRR---------KVPLGR 249

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANL----DSLKQAFPNVQTVQVDLQDWARTRA---- 74
           GIGR      ++  A ++  ++    L    D +         +  D+ D A   A    
Sbjct: 19  GIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVEL 78
Query: 75  AVSKVGPVDVLINNA-AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           AV + G +D   NNA A+        +  E   +++ D N+ +   ++       I    
Sbjct: 79  AVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETL-DTNLTSAF-LAAKYQVPAIAALG 136
Query: 134 QGSIVNVSSIAGKTA-LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
            GS+   SS  G TA   G   Y+ASKA L  + + +A+ELG   IRVN++ P
Sbjct: 137 GGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLP 189

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 43.5 bits (101), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 111 DVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMA 170
           D+N+   + + +  ++ M+     GS V +SSIA          Y  +K+A+D + +  A
Sbjct: 121 DLNVNGTMYVLKHAAREMV-RGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAA 179
Query: 171 LELGPYNIRVNSVQPTVVMTQM 192
            ELG   +RVNS++P ++ T +
Sbjct: 180 DELGASWVRVNSIRPGLIRTDL 201

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 89/224 (39%), Gaps = 42/224 (18%)
Query: 24  IGRCIVEKLSQ--HEAIIIALSKTQANL---DSLKQAFPNVQTV-QVDLQDWARTRAAVS 77
           IGR I  KL Q  +  +I   +  +A +   D L +   N   V Q DL +     A+  
Sbjct: 35  IGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCE 94
Query: 78  KV--------GPVDVLINNAAVARFDRFLDID-EENLIDSIFDVNIKAVIN---ISQVVS 125
           ++        G  DVL+NNA+       +  D E+N      +  +  +I    I+  + 
Sbjct: 95  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLL 154
Query: 126 KTMIDHKIQG----------SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP 175
                 + +G          SIVN+            ++Y+  K AL  +T++ ALEL P
Sbjct: 155 TMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAP 214
Query: 176 YNIRVNSVQPT-----VVMTQMGRTGWSDPAKAGPMLAKTPLGR 214
           Y IRVN V P      V M +  +  W           K PLGR
Sbjct: 215 YGIRVNGVAPGVSLLPVAMGEEEKDKWRR---------KVPLGR 249

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 23  GIGRCIVEKLSQHEAIIIALS-KTQANLDSLKQAFPNVQTVQVDLQDWARTRAAV----S 77
           G+G  +   L+Q  A ++ L  K  A  +   +    V+    D+ + A   AA+     
Sbjct: 18  GLGAAVTRXLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQ 77
Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSI---FDVNIKAVINI----SQVVSKTMID 130
           + G V  L+N A  A  ++ L     + +DS      VN+    N     ++V S+   D
Sbjct: 78  EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNXIRLAAEVXSQGEPD 137
Query: 131 HKIQ-GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
              + G IVN +SIA      G   Y+ASK  + ++T   A EL  + IRV ++ P +  
Sbjct: 138 ADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFD 197
Query: 190 T 190
           T
Sbjct: 198 T 198

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 89/224 (39%), Gaps = 42/224 (18%)
Query: 24  IGRCIVEKLSQ--HEAIIIALSKTQANL---DSLKQAFPNVQTV-QVDLQDWARTRAAVS 77
           IGR I  KL Q  +  +I   +  +A +   D L +   N   V Q DL +     A+  
Sbjct: 35  IGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCE 94
Query: 78  KV--------GPVDVLINNAAVARFDRFLDID-EENLIDSIFDVNIKAVIN---ISQVVS 125
           ++        G  DVL+NNA+       +  D E+N      +  +  +I    I+  + 
Sbjct: 95  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLL 154
Query: 126 KTMIDHKIQG----------SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP 175
                 + +G          SIVN+            ++Y+  K AL  +T++ ALEL P
Sbjct: 155 TMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAP 214
Query: 176 YNIRVNSVQPT-----VVMTQMGRTGWSDPAKAGPMLAKTPLGR 214
           Y IRVN V P      V M +  +  W           K PLGR
Sbjct: 215 YGIRVNGVAPGVSLLPVAMGEEEKDKWRR---------KVPLGR 249

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 89/224 (39%), Gaps = 42/224 (18%)
Query: 24  IGRCIVEKLSQ--HEAIIIALSKTQANL---DSLKQAFPNVQTV-QVDLQDWARTRAAVS 77
           IGR I  KL Q  +  +I   +  +A +   D L +   N   V Q DL +     A+  
Sbjct: 15  IGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCE 74
Query: 78  KV--------GPVDVLINNAAVARFDRFLDID-EENLIDSIFDVNIKAVIN---ISQVVS 125
           ++        G  DVL+NNA+       +  D E+N      +  +  +I    I+  + 
Sbjct: 75  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLL 134
Query: 126 KTMIDHKIQG----------SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP 175
                 + +G          SIVN+            ++Y+  K AL  +T++ ALEL P
Sbjct: 135 TMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAP 194
Query: 176 YNIRVNSVQPT-----VVMTQMGRTGWSDPAKAGPMLAKTPLGR 214
           Y IRVN V P      V M +  +  W           K PLGR
Sbjct: 195 YGIRVNGVAPGVSLLPVAMGEEEKDKWRR---------KVPLGR 229

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 89/224 (39%), Gaps = 42/224 (18%)
Query: 24  IGRCIVEKLSQ--HEAIIIALSKTQANL---DSLKQAFPNVQTV-QVDLQDWARTRAAVS 77
           IGR I  KL Q  +  +I   +  +A +   D L +   N   V Q DL +     A+  
Sbjct: 15  IGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCE 74
Query: 78  KV--------GPVDVLINNAAVARFDRFLDID-EENLIDSIFDVNIKAVIN---ISQVVS 125
           ++        G  DVL+NNA+       +  D E+N      +  +  +I    I+  + 
Sbjct: 75  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLL 134
Query: 126 KTMIDHKIQG----------SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP 175
                 + +G          SIVN+            ++Y+  K AL  +T++ ALEL P
Sbjct: 135 TMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAP 194
Query: 176 YNIRVNSVQPT-----VVMTQMGRTGWSDPAKAGPMLAKTPLGR 214
           Y IRVN V P      V M +  +  W           K PLGR
Sbjct: 195 YGIRVNGVAPGVSLLPVAMGEEEKDKWRR---------KVPLGR 229

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 10/110 (9%)
Query: 107 DSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT 166
           + +  VN+     +++   + + +    GS+V   S+AG  A  G   Y+A K  +  + 
Sbjct: 105 EKVLRVNLTGSFLVARKAGEVLEE---GGSLVLTGSVAGLGAF-GLAHYAAGKLGVVGLA 160
Query: 167 RTMALELGPYNIRVNSVQPTVVMTQM--GRTGWSDPAKAGPMLAKTPLGR 214
           RT+ALEL    +RVN + P ++ T M  G   W+   + G     +PLGR
Sbjct: 161 RTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVG----ASPLGR 206

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 89/224 (39%), Gaps = 42/224 (18%)
Query: 24  IGRCIVEKLSQ--HEAIIIALSKTQANL---DSLKQAFPNVQTV-QVDLQDWARTRAAVS 77
           IGR I  KL Q  +  +I   +  +A +   D L +   N   V Q DL +     A+  
Sbjct: 15  IGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCE 74
Query: 78  KV--------GPVDVLINNAAVARFDRFLDID-EENLIDSIFDVNIKAVIN---ISQVVS 125
           ++        G  DVL+NNA+       +  D E+N      +  +  +I    I+  + 
Sbjct: 75  EIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLL 134
Query: 126 KTMIDHKIQG----------SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP 175
                 + +G          SIVN+            ++Y+  K AL  +T++ ALEL P
Sbjct: 135 TMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAP 194
Query: 176 YNIRVNSVQPT-----VVMTQMGRTGWSDPAKAGPMLAKTPLGR 214
           Y IRVN V P      V M +  +  W           K PLGR
Sbjct: 195 YGIRVNGVAPGVSLLPVAMGEEEKDKWRR---------KVPLGR 229

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
Query: 62  VQVDLQDWARTRAAVSK----VGPVDVLINNAAV---ARFDRFLDIDEENLIDSIFDVNI 114
           +  DL D   TR  ++K    +G +D+L+NNA +   A  + F  +D+ N   +I  +N+
Sbjct: 60  LNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEF-PVDKWN---AIIALNL 115
Query: 115 KAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELG 174
            AV +     +  ++  +  G I+N++S  G  A    + Y A+K  +  +T+  ALE  
Sbjct: 116 SAVFH-GTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENA 174
Query: 175 PYNIRVNSVQPTVVMT 190
              I  N++ P  V T
Sbjct: 175 GKGITCNAICPGWVRT 190

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 111 DVNIKAVINISQVVSKTMI-----DHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI 165
           D+ +    N++++V+ ++      ++  +G++V  +SIAG     G T Y+A+KA +  +
Sbjct: 138 DLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGL 197
Query: 166 TRTMALELGPYNIRVNSVQPTVVMT 190
           T   A +L    IRVN++ P  + T
Sbjct: 198 TIAAARDLSSAGIRVNTIAPGTMKT 222

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 31/199 (15%)
Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL---------------KQAFPNVQTVQVDLQ 67
           GIG+ I  K ++  A I+  +KT      L                +A P +  V+ + Q
Sbjct: 56  GIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQ 115
Query: 68  DWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT 127
             A    A+ K G +D+L+NNA+       LD   + L D + +VN +     + + SK 
Sbjct: 116 ISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRL-DLMMNVNTRG----TYLASKA 170
Query: 128 MIDHKIQGSIVNVSSIAGKTAL-----EGHTIYSASKAALDSITRTMALELGPYNIRVNS 182
            I +  +  + ++ +I+    L     + H  Y+ +K  +      MA E     I VN+
Sbjct: 171 CIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEF-KGEIAVNA 229
Query: 183 VQP-----TVVMTQMGRTG 196
           + P     T  M  +G  G
Sbjct: 230 LWPKTAIHTAAMDMLGGPG 248

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           GSIV ++ + G+  +  + +   +KA+LD+  + +A +LG  NIRVNS+    + T +  
Sbjct: 141 GSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRT-LSA 199
Query: 195 TGWSD 199
            G SD
Sbjct: 200 KGISD 204

>pdb|1NAS|A Chain A, Sepiapterin Reductase Complexed With N-acetyl Serotonin Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 96/201 (47%), Gaps = 25/201 (12%)
Query: 23  GIGRCIVEKLSQH---EAIIIALSKTQANLDSLKQAF----PNVQTV--QVDLQDWARTR 73
           G GR +  +L++     ++++  +++++ L  LK+      P+++ V    DL   A  +
Sbjct: 17  GFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQ 76
Query: 74  AAVSKVGPVD--------VLINNAAVAR--FDRFLDIDEENLIDSIFDVNIKAVINISQV 123
             +S V  +         +LINNAA        FL++++   +++ + +N+ +++ ++  
Sbjct: 77  RLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSG 136
Query: 124 VSKTMIDH-KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNS 182
                 D   +  ++VN+SS+      +G  +Y A KAA D + + +A E    ++RV S
Sbjct: 137 TLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLS 194
Query: 183 VQPTVV---MTQMGRTGWSDP 200
             P  +   M Q+ R    DP
Sbjct: 195 YAPGPLDNDMQQLARETSKDP 215

>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec Complexed With Bromide Length = 254

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 44  KTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDE- 102
           K +  L++  + +P ++ +  + +      A  S  G VDVL++N   A    F  ID+ 
Sbjct: 36  KQKDELEAFAETYPQLKPMS-EQEPAELIEAVTSAYGQVDVLVSNDIFA--PEFQPIDKY 92
Query: 103 --ENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA 160
             E+   ++  + I+    ++ V S+  +  +  G I+ ++S       +  + Y++++A
Sbjct: 93  AVEDYRGAVEALQIRPFALVNAVASQ--MKKRKSGHIIFITSATPFGPWKELSTYTSARA 150
Query: 161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
              ++   ++ ELG YNI V ++ P  + ++
Sbjct: 151 GACTLANALSKELGEYNIPVFAIGPNYLHSE 181

>pdb|1SEP|A Chain A, Mouse Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 261

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/201 (22%), Positives = 96/201 (47%), Gaps = 25/201 (12%)
Query: 23  GIGRCIVEKLSQH---EAIIIALSKTQANLDSLKQAF----PNVQTV--QVDLQDWARTR 73
           G GR +  +L++     ++++  +++++ L  LK+      P+++ V    DL   A  +
Sbjct: 19  GFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQ 78
Query: 74  AAVSKVGPVD--------VLINNAAVAR--FDRFLDIDEENLIDSIFDVNIKAVINISQV 123
             +S V  +         +LINNAA        FL++++   +++ + +N+ +++ ++  
Sbjct: 79  RLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSG 138
Query: 124 VSKTMIDH-KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNS 182
                 D   +  ++VN+SS+      +G  +Y A KAA D + + +A E    ++RV S
Sbjct: 139 TLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLS 196
Query: 183 VQPTVV---MTQMGRTGWSDP 200
             P  +   M Q+ R    DP
Sbjct: 197 YAPGPLDNDMQQLARETSKDP 217

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 80  GPVDVLINNAAVARFD----RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
           G +D L++  A A  +    R++D   ++ + ++ +V+  +++ +++     + +    G
Sbjct: 85  GGLDYLVHAIAFAPREAXEGRYIDTRRQDWLLAL-EVSAYSLVAVARRAEPLLREG---G 140
Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT 195
            IV ++  A +  +  + + + +KAAL++  R +A ELGP  +RVN++    V T   R+
Sbjct: 141 GIVTLTYYASEKVVPKYNVXAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS 200

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 80  GPVDVLINNAAVARFD----RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
           G +D L++  A A  +    R++D   ++ + ++ +V+  +++ +++     + +    G
Sbjct: 85  GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLAL-EVSAYSLVAVARRAEPLLREG---G 140
Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT 195
            IV ++  A +  +  + + + +KAAL++  R +A ELGP  +RVN++    V T   R+
Sbjct: 141 GIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS 200

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	238
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-72
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	7e-71
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	5e-57
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	6e-54
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	4e-51
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	1e-50
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	3e-50
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	3e-50
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	4e-50
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-49
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-49
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	2e-49
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	8e-49
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	9e-49
4e4y_A	244	Short chain dehydrogenase family protein; structur	2e-48
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-48
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	2e-48
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	3e-48
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	1e-47
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-47
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	4e-47
1xkq_A	280	Short-chain reductase family member (5D234); parra	6e-47
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	9e-47
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	1e-46
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	1e-46
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-46
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	3e-46
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	4e-46
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	7e-46
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-45
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	2e-45
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-45
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	3e-45
1xhl_A	297	Short-chain dehydrogenase/reductase family member	5e-45
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	5e-45
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	6e-45
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	9e-45
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-44
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	1e-44
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-44
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-44
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	3e-44
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	4e-44
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	4e-44
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	6e-44
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	8e-44
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	1e-43
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-43
1spx_A	278	Short-chain reductase family member (5L265); paral	1e-43
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-43
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-43
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	3e-43
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	3e-43
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	3e-43
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	3e-43
4dqx_A	277	Probable oxidoreductase protein; structural genomi	4e-43
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	4e-43
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	5e-43
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	6e-43
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	6e-43
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	7e-43
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	8e-43
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	8e-43
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	8e-43
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	8e-43
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	8e-43
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	9e-43
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	9e-43
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-42
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	2e-42
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	6e-42
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	7e-42
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	8e-42
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	8e-42
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	1e-41
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-41
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	3e-41
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	3e-41
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-41
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	5e-41
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	8e-41
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	9e-41
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-40
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-40
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	2e-40
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-40
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	5e-40
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	5e-40
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	6e-40
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	6e-40
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	7e-40
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	9e-40
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-39
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	2e-39
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	2e-39
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	2e-39
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-39
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-39
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	4e-39
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	6e-39
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	7e-39
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	8e-39
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-38
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-38
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-38
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-38
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-38
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	4e-38
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	4e-38
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	4e-38
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	6e-38
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	7e-38
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	7e-38
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	8e-38
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	1e-37
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-37
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	3e-37
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	5e-37
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	7e-37
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	7e-37
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	8e-37
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	9e-37
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-36
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-36
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	2e-36
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	3e-36
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	5e-36
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	5e-36
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	6e-36
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	8e-36
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	8e-36
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	8e-36
3rih_A	293	Short chain dehydrogenase or reductase; structural	1e-35
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-35
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	1e-35
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-35
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-35
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	3e-35
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	5e-35
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	5e-35
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	6e-35
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	7e-35
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	7e-35
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	8e-35
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-34
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-34
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	3e-34
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	4e-34
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	4e-34
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	5e-34
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	6e-34
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	9e-34
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-33
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	2e-33
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-33
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	3e-33
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	4e-33
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	6e-33
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	6e-33
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-32
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	2e-32
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-32
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	4e-32
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	5e-32
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	7e-32
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	2e-31
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	2e-31
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	7e-31
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	2e-30
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	3e-30
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	4e-30
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-29
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	2e-29
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	3e-29
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	1e-28
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	1e-28
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	5e-28
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	9e-28
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-27
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-23
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-22
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	6e-23
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	1e-20
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-20
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	2e-20
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	5e-13
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-08
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	3e-07
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	6e-07
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	8e-07
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	2e-06
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	3e-06
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	4e-06
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	5e-06
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	5e-06
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	6e-06
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	1e-05
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-05
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	2e-05
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	2e-05
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	4e-05
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	5e-05
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	5e-05
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	2e-04
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	4e-04
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	4e-04
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	6e-04

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  220 bits (562), Expect = 2e-72
 Identities = 99/194 (51%), Positives = 137/194 (70%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V+ L    A ++A+S+TQA+LDSL +  P ++ V VDL DW  T  A+  VGPV
Sbjct: 18  GIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPV 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAAVA    FL++ +E   D  F+VN++AVI +SQ+V++ +I   + G+IVNVSS
Sbjct: 78  DLLVNNAAVALLQPFLEVTKEAF-DRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
              + A+  H++Y ++K ALD +T+ MALELGP+ IRVN+V PTVVMT MG+  WSDP K
Sbjct: 137 QCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK 196

Query: 203 AGPMLAKTPLGRFA 216
           A  ML + PLG+FA
Sbjct: 197 AKTMLNRIPLGKFA 210

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  215 bits (551), Expect = 7e-71
 Identities = 82/194 (42%), Positives = 124/194 (63%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V+ L    A ++A+++T ++L SL +  P ++ V VDL DW  T  A+  +GPV
Sbjct: 18  GIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPV 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAA+     FL++ +E   D  F VN+++V  +SQ+V++ MI+  + GSIVNVSS
Sbjct: 78  DLLVNNAALVIMQPFLEVTKEAF-DRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
           +           YS++K A+  +T+ MA+ELGP+ IRVNSV PTVV+T MG+   +DP  
Sbjct: 137 MVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEF 196

Query: 203 AGPMLAKTPLGRFA 216
           A  +  + PL +FA
Sbjct: 197 ARKLKERHPLRKFA 210

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  181 bits (462), Expect = 5e-57
 Identities = 72/203 (35%), Positives = 108/203 (53%), Gaps = 10/203 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVS 77
           GIG  I    +   A ++   +  + LD+ ++A       +V TV +DL +         
Sbjct: 31  GIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELAR 90

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +     G +DVL+NNA ++     +D D +   D+   VN++A   ++  V K M+    
Sbjct: 91  RAAEAFGGLDVLVNNAGISHPQPVVDTDPQLF-DATIAVNLRAPALLASAVGKAMVAAGE 149

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G+I+ V+S A    L  H  Y  SKA L   T+ +A ELGP+ IR NSV PTVV+T+MG
Sbjct: 150 GGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMG 209

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
           +  W D AK+ PM+A+ PLGRFA
Sbjct: 210 QRVWGDEAKSAPMIARIPLGRFA 232

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  173 bits (441), Expect = 6e-54
 Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 11/203 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD----SLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG  I  +L+Q  A ++  S+ Q N+D    +L+    +V      +         V+ 
Sbjct: 25  GIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAM 84

Query: 79  V----GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                G VD+L++NAAV   F   +D  EE   D I  VN+KA + +++ V   M     
Sbjct: 85  AVNLHGGVDILVSNAAVNPFFGNIIDATEEVW-DKILHVNVKATVLMTKAVVPEMEKRG- 142

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            GS++ VSS+           Y+ SK AL  +T+ +A+EL P NIRVN + P ++ T   
Sbjct: 143 GGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFS 202

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
           +  W D A+   M     + R  
Sbjct: 203 QVLWMDKARKEYMKESLRIRRLG 225

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  166 bits (422), Expect = 4e-51
 Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 11/202 (5%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           G+G+    +L+++   I+   A SK  A    + +++    V  V+ ++   A+ +    
Sbjct: 15  GVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQ 74

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           ++    G +DV +NNAA       ++++E +  D   ++N KA++  +Q  +K M  +  
Sbjct: 75  QIDETFGRLDVFVNNAASGVLRPVMELEETH-WDWTMNINAKALLFCAQEAAKLMEKNG- 132

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IV++SS+     LE +T    SKAAL+++TR +A+EL P  I VN+V    + T   
Sbjct: 133 GGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDAL 192

Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
           +   +           TP GR 
Sbjct: 193 KHFPNREDLLEDARQNTPAGRM 214

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  164 bits (418), Expect = 1e-50
 Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 15/208 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           GIGR   E   +  A +                  P    VQ+D+       AA++    
Sbjct: 19  GIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVE 78

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G +D+L+NNAA+      ++I  E+  + +F +N+   +   Q  ++ MI     G I
Sbjct: 79  HAGGLDILVNNAALFDLAPIVEITRESY-EKLFAINVAGTLFTLQAAARQMIAQGRGGKI 137

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM----- 192
           +N++S AG+       IY A+KAA+ S+T++  L+L  + I VN++ P VV  +      
Sbjct: 138 INMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVD 197

Query: 193 ----GRTGWSDPAKAGPMLAKTPLGRFA 216
                        K   +    P GR  
Sbjct: 198 ALFARYENRPRGEKKRLVGEAVPFGRMG 225

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  163 bits (416), Expect = 3e-50
 Identities = 47/202 (23%), Positives = 96/202 (47%), Gaps = 10/202 (4%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           G+G+ +  + +  +A ++      + +AN  L+ +K+       V+ D+   +     V 
Sbjct: 18  GLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQ 77

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                 G +DV+INNA +       ++   +  + + D N+      S+   K  +++ I
Sbjct: 78  SAIKEFGKLDVMINNAGLENPVSSHEMSLSD-WNKVIDTNLTGAFLGSREAIKYFVENDI 136

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           +G+++N+SS+  K        Y+ASK  +  +T T+ALE  P  IRVN++ P  + T + 
Sbjct: 137 KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPIN 196

Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
              ++DP +   + +  P+G  
Sbjct: 197 AEKFADPEQRADVESMIPMGYI 218

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  164 bits (417), Expect = 3e-50
 Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 15/207 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN----VQTVQVDLQDWARTRAAVSK 78
           GIG  IVE+L+   A +   S+ +  LD   + +      V+    DL         +  
Sbjct: 32  GIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQT 91

Query: 79  V-----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           V     G +++L+NNA V       D  E++  + I   N +A  ++SQ+    +   + 
Sbjct: 92  VAHVFDGKLNILVNNAGVVIHKEAKDFTEKDY-NIIMGTNFEAAYHLSQIAYPLLKASQ- 149

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G+++ +SSIAG +AL   ++YSASK A++ +T+++A E    NIRVNSV P V++T + 
Sbjct: 150 NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLV 209

Query: 194 RTGWSD----PAKAGPMLAKTPLGRFA 216
            T          +    + KTP+GR  
Sbjct: 210 ETAIKKNPHQKEEIDNFIVKTPMGRAG 236

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  163 bits (415), Expect = 4e-50
 Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 14/206 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVSK 78
           GIG  IVE+L+   A +   S+ Q  L+     +      V+    DL   +  +  ++ 
Sbjct: 20  GIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNT 79

Query: 79  V-----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           V     G +++L+NNA +  +    D   E+    I  +N +A  ++S +    +   + 
Sbjct: 80  VANHFHGKLNILVNNAGIVIYKEAKDYTVEDY-SLIMSINFEAAYHLSVLAHPFLKASE- 137

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           +G++V +SS++G  A+    +Y A+K A+D +TR +A E    NIRVN V P V+ T + 
Sbjct: 138 RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLV 197

Query: 194 RTGWSDPAKA---GPMLAKTPLGRFA 216
                DP +      ++ +  L R  
Sbjct: 198 EMTIQDPEQKENLNKLIDRCALRRMG 223

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  162 bits (412), Expect = 1e-49
 Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 12/202 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG  IVE+ +   A+I   ++ +  L+      ++    V     D          +  
Sbjct: 25  GIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQT 84

Query: 79  V-----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           V     G +D+LINN    R    LD   E+        N+++  ++SQ+    +     
Sbjct: 85  VSSMFGGKLDILINNLGAIRSKPTLDYTAEDF-SFHISTNLESAYHLSQLAHPLLKASG- 142

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G+I+ +SSIAG  +    +IYSA+K AL+ + R +A E     IR N+V P V+ T + 
Sbjct: 143 CGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLA 202

Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
              + D  K   ++++ PLGRF
Sbjct: 203 EAVYDDEFKKV-VISRKPLGRF 223

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  161 bits (410), Expect = 2e-49
 Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 20/213 (9%)

Query: 23  GIGRCIVEKLSQHEAII----IALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAV 76
           GIGR I EKL+     I    +   + QA   +  ++ A      V +D+ D A   +A+
Sbjct: 13  GIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAI 72

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            +     G  DVL+NNA +A+    L++ EE+L   I+ VN+ +V    Q  S+   +  
Sbjct: 73  DEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDL-KQIYSVNVFSVFFGIQAASRKFDELG 131

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           ++G I+N +SIA        + YS +K A+  +T+  A EL P    VN+  P +V T M
Sbjct: 132 VKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM 191

Query: 193 ---------GRTGWSDPAKAGPMLAKTPLGRFA 216
                       G           +   LGR +
Sbjct: 192 WEQIDAELSKINGKPIGENFKEYSSSIALGRPS 224

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  161 bits (410), Expect = 2e-49
 Identities = 59/203 (29%), Positives = 92/203 (45%), Gaps = 13/203 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           G+G   V +L +  A ++   + ++N+  +++ F P V  ++ D+ D        +    
Sbjct: 19  GMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQ 78

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G +D+L  NA V+  + F  + E +  D  F VN K      Q ++  + +    GSI
Sbjct: 79  TLGAIDLLHINAGVSELEPFDQVSEAS-YDRQFAVNTKGAFFTVQRLTPLIRE---GGSI 134

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM----G 193
           V  SS+A +    G ++YSASKAAL S    +A EL P  IRVNSV P  + T      G
Sbjct: 135 VFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAG 194

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
            T              TP+ R  
Sbjct: 195 ITEAERAEFKTLGDNITPMKRNG 217

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  160 bits (406), Expect = 8e-49
 Identities = 59/211 (27%), Positives = 88/211 (41%), Gaps = 18/211 (8%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG+ I  +L +      I   +   A      + QA  +   V+VD+ D  +  AAV +
Sbjct: 13  GIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQ 72

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                G  DV++NNA VA       I  E + D ++++N+K VI   Q   +        
Sbjct: 73  ARKTLGGFDVIVNNAGVAPSTPIESITPEIV-DKVYNINVKGVIWGIQAAVEAFKKEGHG 131

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM-- 192
           G I+N  S AG        +YS+SK A+  +T+T A +L P  I VN   P +V T M  
Sbjct: 132 GKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA 191

Query: 193 -------GRTGWSDPAKAGPMLAKTPLGRFA 216
                     G            +  LGR +
Sbjct: 192 EIDRQVSEAAGKPLGYGTAEFAKRITLGRLS 222

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  160 bits (408), Expect = 9e-49
 Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 14/206 (6%)

Query: 23  GIGRCIVEKLSQHEAIII-------ALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAA 75
           GIG+ +   L    A ++        L+     L++L      ++    D+ +   T  A
Sbjct: 22  GIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARA 81

Query: 76  VSKV----GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
           V  V    G +  +++ A  +        +D E       D+N+   + + +  ++ M+ 
Sbjct: 82  VDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAW-RRTVDLNVNGTMYVLKHAAREMVR 140

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
               GS V +SSIA          Y  +K+A+D + +  A ELG   +RVNS++P ++ T
Sbjct: 141 GG-GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRT 199

Query: 191 QMGRTGWSDPAKAGPMLAKTPLGRFA 216
            +          +      TPL R  
Sbjct: 200 DLVAAITESAELSSDYAMCTPLPRQG 225

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  158 bits (402), Expect = 2e-48
 Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 22/206 (10%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-- 79
           GIG+ +VE L Q++   +I +   Q+          N++ ++ DL         +  +  
Sbjct: 15  GIGKAVVELLLQNKNHTVINIDIQQSFSAE------NLKFIKADLTKQQDITNVLDIIKN 68

Query: 80  GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVN 139
              D +  NA +       DID E+ I  + D+N+ + I   + +   +   K+  SIV 
Sbjct: 69  VSFDGIFLNAGILIKGSIFDIDIES-IKKVLDLNVWSSIYFIKGLENNL---KVGASIVF 124

Query: 140 VSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD 199
             S     A      Y+ SK A+  +T+++AL+L  Y IRVN+V P  V T + R     
Sbjct: 125 NGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQK 184

Query: 200 PAKAGP---------MLAKTPLGRFA 216
            A                + PL R A
Sbjct: 185 YANNVGISFDEAQKQEEKEFPLNRIA 210

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  159 bits (404), Expect = 2e-48
 Identities = 64/208 (30%), Positives = 90/208 (43%), Gaps = 15/208 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN-VQTVQVDLQDWARTRAAVSKV-- 79
           GIG  I   L +  A +           ++     N    V+VD+   A   AA+ K   
Sbjct: 23  GIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAID 82

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G  D+L  NA V+     +DI +E   D  FDVN + V   +Q+  +  +    +G I
Sbjct: 83  ALGGFDLLCANAGVSTMRPAVDITDEEW-DFNFDVNARGVFLANQIACRHFLASNTKGVI 141

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM----- 192
           VN +S+A K        YSASK A+   T+ +A E+ P NIRVN V P  V T M     
Sbjct: 142 VNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREI 201

Query: 193 ----GRTGWSDPAKAGPMLAKTPLGRFA 216
                  G +  A     ++ TPLGR  
Sbjct: 202 IWEAELRGMTPEAVRAEYVSLTPLGRIE 229

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  159 bits (404), Expect = 2e-48
 Identities = 53/204 (25%), Positives = 79/204 (38%), Gaps = 14/204 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           GIG    ++     A +    + +  LD+           +Q D  + A       KV  
Sbjct: 40  GIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKA 99

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G +DVL  NA         ++ EE   D  FD N+K V+   Q     +       S+
Sbjct: 100 EAGRIDVLFVNAGGGSMLPLGEVTEEQ-YDDTFDRNVKGVLFTVQKALPLLAR---GSSV 155

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM----- 192
           V   S AG T     ++Y+ASKAAL S  R   L+L    IR+N++ P    T       
Sbjct: 156 VLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELA 215

Query: 193 GRTGWSDPAKAGPMLAKTPLGRFA 216
           G+           + A+ P+GR  
Sbjct: 216 GKDPVQQQGLLNALAAQVPMGRVG 239

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  158 bits (402), Expect = 3e-48
 Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 12/202 (5%)

Query: 23  GIGRCIVEKLSQHEA-IIIA---LSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG+ I    +   A ++++          +D ++Q        + D+       A    
Sbjct: 22  GIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF 81

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                G VD+L+NNA      +  D+   +     +++N+ +  ++SQ+V+  M  +   
Sbjct: 82  AISKLGKVDILVNNAGGGG-PKPFDMPMADF-RRAYELNVFSFFHLSQLVAPEMEKNG-G 138

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G I+ ++S+A +      T Y++SKAA   + R MA +LG  NIRVN + P  ++T   +
Sbjct: 139 GVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK 198

Query: 195 TGWSDPAKAGPMLAKTPLGRFA 216
           +  +   +   ML  TP+ R  
Sbjct: 199 SVITPEIEQK-MLQHTPIRRLG 219

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  157 bits (399), Expect = 1e-47
 Identities = 56/203 (27%), Positives = 86/203 (42%), Gaps = 18/203 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG  +V  L    A +         +  +         +  DL++ A        V   
Sbjct: 39  GIGGAVVTALRAAGARVAV---ADRAVAGIAADL----HLPGDLREAAYADGLPGAVAAG 91

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            G +D+++NNA V    R  +  + +       VN++A   I +     M      G+IV
Sbjct: 92  LGRLDIVVNNAGVISRGRITETTDAD-WSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIV 149

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS 198
           NV+S  G     GH +Y  +KAAL S+T+ M ++  P  IR+N+V P  V T M RTG++
Sbjct: 150 NVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFA 209

Query: 199 DPAKAGP-----MLAKTPLGRFA 216
                       +    PLGR A
Sbjct: 210 KRGFDPDRAVAELGRTVPLGRIA 232

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  156 bits (397), Expect = 3e-47
 Identities = 51/203 (25%), Positives = 85/203 (41%), Gaps = 14/203 (6%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG  I  +L+     ++   A     A      ++ A     T Q D+ D A  R   +
Sbjct: 38  GIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFA 97

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                 G VDVL+NNA +       +  +    D +  VN+K   N  +  ++ +     
Sbjct: 98  TAEEAFGGVDVLVNNAGIMPLTTIAETGDAVF-DRVIAVNLKGTFNTLREAAQRLRVG-- 154

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N+S+         + IY+A+KA ++++T  ++ EL   +I VN+V P    T + 
Sbjct: 155 -GRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLF 213

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
             G SD  +        PL R  
Sbjct: 214 LEGKSDEVRDR-FAKLAPLERLG 235

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  155 bits (394), Expect = 4e-47
 Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 8/199 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIG+      ++  A +IA    ++ L  L++  P +QT  +D+    +     ++V  +
Sbjct: 17  GIGQAAALAFAREGAKVIATDINESKLQELEKY-PGIQTRVLDVTKKKQIDQFANEVERL 75

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           DVL N A        LD +E++  D   ++N++++  + +     M+  K  G+I+N+SS
Sbjct: 76  DVLFNVAGFVHHGTVLDCEEKDW-DFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSS 133

Query: 143 IAGK-TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR---TGWS 198
           +A     +    +YS +KAA+  +T+++A +     IR N V P  V T   +       
Sbjct: 134 VASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARG 193

Query: 199 DPAKA-GPMLAKTPLGRFA 216
           +P +A    L +   GRFA
Sbjct: 194 NPEEARNDFLKRQKTGRFA 212

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  155 bits (395), Expect = 6e-47
 Identities = 63/216 (29%), Positives = 92/216 (42%), Gaps = 24/216 (11%)

Query: 23  GIGRCIVEKLSQHEAIII-------ALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAA 75
           GIGR      +Q  A +         L +T+  +     +   V +V  D+         
Sbjct: 17  GIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQI 76

Query: 76  VSKV----GPVDVLINNAAVARFDRFLDIDEENLI---DSIFDVNIKAVINISQVVSKTM 128
           ++      G +DVL+NNA  A  D F     +  I        +N++AVI +++ V   +
Sbjct: 77  INSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHL 136

Query: 129 IDHKIQGSIVNVSSI-AGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
           +  K  G IVNVSSI AG  A      Y+ +KAALD  TR+ A++L  + IRVNSV P +
Sbjct: 137 VASK--GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGM 194

Query: 188 VMTQM-GRTGWSDPAKAGP------MLAKTPLGRFA 216
           V T      G  D A               P+G   
Sbjct: 195 VETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAG 230

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  155 bits (393), Expect = 9e-47
 Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 21/212 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK 78
            +G  +  + ++  A ++  ++T   L+     +        +V  D+ D A+    V +
Sbjct: 22  ALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDE 81

Query: 79  V----GPVDVLINNAA-VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                G VDV+INNA  V     F +   E+ +    ++ +   + + Q  +  + + K 
Sbjct: 82  TMKAYGRVDVVINNAFRVPSMKPFANTTFEH-MRDAIELTVFGALRLIQGFTPALEESK- 139

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G++VNV+S+  + +   +  Y  +K+AL ++++T+A ELG   IRVNSV P  +     
Sbjct: 140 -GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTL 198

Query: 194 RTGWSDPAKAGP---------MLAKTPLGRFA 216
           ++ +   A               A + L R  
Sbjct: 199 KSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLP 230

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  155 bits (393), Expect = 1e-46
 Identities = 44/214 (20%), Positives = 77/214 (35%), Gaps = 22/214 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN------VQTVQVDLQDWARTRAAV 76
           GIG   VE L +  A +   ++    L + + A         +     D+ D  + RA  
Sbjct: 19  GIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFA 78

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
                  G   +L+NNA   R   F +  +E        +   +VI+  +     +    
Sbjct: 79  EACERTLGCASILVNNAGQGRVSTFAETTDEAW-SEELQLKFFSVIHPVRAFLPQLESRA 137

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
              +IV V+S+            SA++A + ++ R+MA E  P  +RVN +   +V +  
Sbjct: 138 -DAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQ 196

Query: 193 ----------GRTGWSDPAKAGPMLAKTPLGRFA 216
                         W+          + PLGR  
Sbjct: 197 WRRRFEAREERELDWAQWTAQLARNKQIPLGRLG 230

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  154 bits (392), Expect = 1e-46
 Identities = 42/199 (21%), Positives = 80/199 (40%), Gaps = 15/199 (7%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-- 79
            +G     +L +H   +II+     A++  L+QA      +  D        A +  +  
Sbjct: 38  RVGLHCALRLLEHGHRVIISYRTEHASVTELRQA--GAVALYGDFSCETGIMAFIDLLKT 95

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
               +  +++NA+    +   +  +      +F V++ A   I+      +   +    I
Sbjct: 96  QTSSLRAVVHNASEWLAETPGEEADN--FTRMFSVHMLAPYLINLHCEPLLTASE-VADI 152

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           V++S    +     H  Y A+KA L+S+T + A    P  ++VN + P ++M Q      
Sbjct: 153 VHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQP----K 207

Query: 198 SDPAKAGPMLAKTPLGRFA 216
            D A     LAK+ LG   
Sbjct: 208 DDAAYRANALAKSALGIEP 226

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  153 bits (390), Expect = 2e-46
 Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 9/201 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP--NVQTVQVDLQDWARTRAAVSKV- 79
           GIG  I    +   A +I + +  A LD   Q         +  D+ D     AA ++  
Sbjct: 22  GIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAE 81

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
              PV +L+N+A +AR    L+ D+      +  VN+  +   S+   + M+     G+I
Sbjct: 82  AVAPVSILVNSAGIARLHDALETDDATW-RQVMAVNVDGMFWASRAFGRAMVARG-AGAI 139

Query: 138 VNVSSIAGKTALEGHTI--YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT 195
           VN+ S++G           Y ASK A+  +TR +A E     +RVN++ P  V T+M   
Sbjct: 140 VNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLK 199

Query: 196 GWSDPAKAGPMLAKTPLGRFA 216
               P      L  TP+GR  
Sbjct: 200 MRERPELFETWLDMTPMGRCG 220

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  153 bits (389), Expect = 3e-46
 Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 19/209 (9%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIGR I ++L+   A++       K +A   +  ++    +  ++  +L+      A  S
Sbjct: 18  GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYS 77

Query: 78  KV----------GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT 127
            +             D+LINNA +       +  E+   D +  VN KA   I Q     
Sbjct: 78  SLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFF-DRMVSVNAKAPFFIIQQALSR 136

Query: 128 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
           + D+     I+N+SS A + +L     YS +K A++++T T+A +LG   I VN++ P  
Sbjct: 137 LRDN---SRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGF 193

Query: 188 VMTQMGRTGWSDPAKAGPMLAKTPLGRFA 216
           V T M     SDP         +   R  
Sbjct: 194 VKTDMNAELLSDPMMKQYATTISAFNRLG 222

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  152 bits (387), Expect = 4e-46
 Identities = 35/202 (17%), Positives = 71/202 (35%), Gaps = 10/202 (4%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWAR-TRAAVSKVG 80
             G   VE L+Q    ++   +      +  +    N  T+ +  Q   R   A +    
Sbjct: 12  FAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIALAEQKPERLVDATLQHGE 71

Query: 81  PVDVLINNAAVAR---FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
            +D +++N  + R           E + I  +F+      I + Q     +       S+
Sbjct: 72  AIDTIVSNDYIPRPMNRLPLEGTSEAD-IRQMFEALSIFPILLLQSAIAPLRAAG-GASV 129

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV---MTQMGR 194
           + ++S  GK  L  + +Y  ++AA  ++  + A  L    I + ++ P            
Sbjct: 130 IFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTS 189

Query: 195 TGWSDPAKAGPMLAKTPLGRFA 216
              ++P     +    PLGR  
Sbjct: 190 DWENNPELRERVDRDVPLGRLG 211

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  151 bits (385), Expect = 7e-46
 Identities = 33/189 (17%), Positives = 72/189 (38%), Gaps = 9/189 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV-- 79
           G+GR +   L +    +  + +    L   +      V  +  DL        A +    
Sbjct: 14  GLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVE 73

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G  +++++ A    F        E  I  + + N+ + I ++Q   + + +    G +
Sbjct: 74  WGGLPELVLHCAGTGEFGPVGVYTAEQ-IRRVMESNLVSTILVAQQTVRLIGERG--GVL 130

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM-GRTG 196
            NV S A +      ++Y ASK  +     ++  EL    +R+ ++ P+ + ++    T 
Sbjct: 131 ANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD 190

Query: 197 WSDPAKAGP 205
             DP+    
Sbjct: 191 HVDPSGFMT 199

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  151 bits (384), Expect = 2e-45
 Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIGR I    ++  A  ++  L    A     +++QA      ++ ++ D     A +  
Sbjct: 23  GIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKA 82

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                G + VL+NNA      +  D+   +  +  F +N+ ++  +SQ+ +  M      
Sbjct: 83  ALDQFGKITVLVNNAGGGG-PKPFDMPMSDF-EWAFKLNLFSLFRLSQLAAPHMQKAG-G 139

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G+I+N+SS+AG+        Y +SKAA++ +TR +A ++GP  IRVN++ P  + T    
Sbjct: 140 GAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALA 199

Query: 195 TGWSDPAKAGPMLAKTPLGRF 215
           T  +   +   ML  TPLGR 
Sbjct: 200 TVLTPEIERA-MLKHTPLGRL 219

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  151 bits (383), Expect = 2e-45
 Identities = 46/203 (22%), Positives = 89/203 (43%), Gaps = 15/203 (7%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV 79
           GIG+ IV+ L   +   ++  +++++A L  LK+ +      V  D+ + +  +  V+  
Sbjct: 13  GIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAA 72

Query: 80  ----GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
               G +D L+ NA V        +ID       ++D+N  +++++  +    +      
Sbjct: 73  VKGHGKIDSLVANAGVLEPVQNVNEIDVNA-WKKLYDINFFSIVSLVGIALPELKKTN-- 129

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G++V VSS A          Y +SKAAL+    T+A E     ++  +V P +V T M  
Sbjct: 130 GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIAVAPGIVDTDMQV 187

Query: 195 TGWSDPAKAGPMLAKTPLGRFAG 217
               +   +   ++   L  F G
Sbjct: 188 NIRENVGPSS--MSAEQLKMFRG 208

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  151 bits (384), Expect = 2e-45
 Identities = 35/204 (17%), Positives = 67/204 (32%), Gaps = 16/204 (7%)

Query: 23  GIGRCIVEKLSQHEAIII-----ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAA 75
            +G    +  +     ++     A     AN   D L+     V   Q DL +       
Sbjct: 22  NLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKL 81

Query: 76  VSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
                   G VD+ IN          ++  E    D++  +N K      +  +K M   
Sbjct: 82  FDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEF-DAMDTINNKVAYFFIKQAAKHMNP- 139

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
              G I+ +++         ++ Y+ +KA ++  TR  + EL    I VN++ P  + T 
Sbjct: 140 --NGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTS 197

Query: 192 MGRTGWSDPAKAGPMLAKTPLGRF 215
                           ++    + 
Sbjct: 198 FFYGQ-ETKESTAFHKSQAMGNQL 220

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  150 bits (381), Expect = 3e-45
 Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 8/200 (4%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV- 79
           GIGR I E+ +   A   I  L        +++     V TV+ D+       A   +V 
Sbjct: 18  GIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVI 77

Query: 80  ---GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
              G  D+L+NNA +     F ++  E      F++N+ +   +++     M  +   G 
Sbjct: 78  STFGRCDILVNNAGIYPLIPFDELTFEQW-KKTFEINVDSGFLMAKAFVPGMKRNG-WGR 135

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG 196
           I+N++S      +E +T Y ++KAA    TR +A +LG   I VN++ P++V T      
Sbjct: 136 IINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS 195

Query: 197 WSDPAKAGPMLAKTPLGRFA 216
                          + R  
Sbjct: 196 ALSAMFDVLPNMLQAIPRLQ 215

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  151 bits (384), Expect = 5e-45
 Identities = 62/215 (28%), Positives = 92/215 (42%), Gaps = 24/215 (11%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAA 75
           GIGR      ++  A +    + +  L+  KQ           +  V  D+ + +     
Sbjct: 37  GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDI 96

Query: 76  VSKV----GPVDVLINNAAVARFDRFL--DIDEENLIDSIFDVNIKAVINISQVVSKTMI 129
           ++      G +D+L+NNA     D     D   E      F +N +AVI ++Q   + +I
Sbjct: 97  INTTLAKFGKIDILVNNAGANLADGTANTDQPVELY-QKTFKLNFQAVIEMTQKTKEHLI 155

Query: 130 DHKIQGSIVNVSSI-AGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
             K  G IVNVSSI AG  A  G+  Y+ +KAALD  TR  A++L  + +RVNSV P  V
Sbjct: 156 KTK--GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAV 213

Query: 189 MTQM-GRTGWSDPAKAGP------MLAKTPLGRFA 216
            T   G  G  + A               P+G   
Sbjct: 214 ATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCG 248

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  149 bits (380), Expect = 5e-45
 Identities = 52/206 (25%), Positives = 78/206 (37%), Gaps = 20/206 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG        +  A +    +      +  Q      T  +D+ D A+      ++   
Sbjct: 18  GIGYATALAFVEAGAKVTGFDQ------AFTQEQYPFATEVMDVADAAQVAQVCQRLLAE 71

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
              +D L+N A + R      + +E+     F VN+    N+ Q         +  G+IV
Sbjct: 72  TERLDALVNAAGILRMGATDQLSKEDW-QQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIV 129

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS 198
            V+S A  T   G + Y ASKAAL S+  ++ LEL    +R N V P    T M RT W 
Sbjct: 130 TVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV 189

Query: 199 DPAKAGP--------MLAKTPLGRFA 216
                               PLG+ A
Sbjct: 190 SDDAEEQRIRGFGEQFKLGIPLGKIA 215

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  149 bits (380), Expect = 6e-45
 Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 13/205 (6%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
            IG   V  L++  A  II  L +  A   ++ L+    +V +V +D+ +    + AV  
Sbjct: 24  NIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRS 83

Query: 79  V----GPVDVLINNAAVARFD-RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           V    G VD+L+  A +   + +  D+ +        D+N+  +    Q V + M++ K 
Sbjct: 84  VHEQEGRVDILVACAGICISEVKAEDMTDGQW-LKQVDINLNGMFRSCQAVGRIMLEQK- 141

Query: 134 QGSIVNVSSIAGKTA--LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
           QG IV + S++G      +    Y+ASKA +    R++A E  P+ IR N+V PT + T 
Sbjct: 142 QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETT 201

Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFA 216
           + R G   P      +A TP+GR  
Sbjct: 202 LTRFGMEKPELYDAWIAGTPMGRVG 226

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  149 bits (379), Expect = 9e-45
 Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 18/205 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIAL---SKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV 79
           GIGR I +  ++  A++       + +   +++  AF      QVDL+D       V + 
Sbjct: 17  GIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAF-----FQVDLEDERERVRFVEEA 71

Query: 80  ----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
               G VDVL+NNAA+A     L +        + +VN+ A +++S + ++ M      G
Sbjct: 72  AYALGRVDVLVNNAAIAAPGSALTVRLPE-WRRVLEVNLTAPMHLSALAAREMRKVG-GG 129

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT 195
           +IVNV+S+ G  A + +  Y+ASK  L ++TR++AL+L P  IRVN+V P  + T+    
Sbjct: 130 AIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLE 189

Query: 196 GWS---DPAKAGP-MLAKTPLGRFA 216
             +   DP +          L R  
Sbjct: 190 AIALSPDPERTRRDWEDLHALRRLG 214

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  149 bits (379), Expect = 1e-44
 Identities = 51/203 (25%), Positives = 98/203 (48%), Gaps = 11/203 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN----VQTVQVDLQDWARTRAAVSK 78
           G+G+ +  + ++  A ++   +T+  L+  K         + TVQ+D+++    +  + +
Sbjct: 17  GMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQ 76

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           +    G +D+LINNAA        D+      +S+ ++ +      SQ + K  I+  I+
Sbjct: 77  IDEKFGRIDILINNAAGNFICPAEDLSVNG-WNSVINIVLNGTFYCSQAIGKYWIEKGIK 135

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP-YNIRVNSVQPTVVMTQMG 193
           G+I+N+ +     A  G    +A+KA + ++T+T+A+E G  Y IRVN++ P  +    G
Sbjct: 136 GNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGG 195

Query: 194 RTG-WSDPAKAGPMLAKTPLGRF 215
               W     A   +   PLGR 
Sbjct: 196 ADKLWISEEMAKRTIQSVPLGRL 218

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  150 bits (381), Expect = 1e-44
 Identities = 41/203 (20%), Positives = 91/203 (44%), Gaps = 11/203 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPN-VQTVQVDLQDWARTRAAVS 77
           G+G+ +   LS   A  +  S+    L +    +     N V  +Q D++D    +  VS
Sbjct: 37  GLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVS 96

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           ++    G  +++INNAA         +       +I D+ +     ++  + K +I  + 
Sbjct: 97  ELIKVAGHPNIVINNAAGNFISPTERLSPNA-WKTITDIVLNGTAFVTLEIGKQLIKAQK 155

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
             + +++++I  +T        +++KA ++++++++A E G Y +R N +QP  + T+  
Sbjct: 156 GAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGA 215

Query: 194 RTGWSDPAKAGP-MLAKTPLGRF 215
            +           M+ + P GR 
Sbjct: 216 FSRLDPTGTFEKEMIGRIPCGRL 238

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  149 bits (378), Expect = 2e-44
 Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 17/204 (8%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG  I ++L+   A +      +  +A   +  ++QA      ++ D +D      A+ 
Sbjct: 42  GIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIR 101

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +     G +D+L+N+A +       +    +  D +  VN +A     +  S+ + D   
Sbjct: 102 ETVEALGGLDILVNSAGIWHSAPLEETTVAD-FDEVMAVNFRAPFVAIRSASRHLGD--- 157

Query: 134 QGSIVNVSS-IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            G I+ + S +A      G ++YSASKAAL  +T+ +A +LGP  I VN V P    T M
Sbjct: 158 GGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDM 217

Query: 193 GRTGWSDPAKAGPMLAKTPLGRFA 216
                +D   A     +   G + 
Sbjct: 218 NP---ADGDHAEAQRERIATGSYG 238

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  148 bits (377), Expect = 2e-44
 Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 11/203 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIA----LSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVS 77
           GIG     +     A ++       +     D L       V+ V  D+       A ++
Sbjct: 34  GIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALIT 93

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +     G +DVL+NNA +      +D+ +E   D + +V + +V+  ++   +       
Sbjct: 94  QTVEKAGRLDVLVNNAGLGGQTPVVDMTDEE-WDRVLNVTLTSVMRATRAALRYFRGVDH 152

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN +S+ G  A    + Y+A+KA + ++TR  A+E   + +R+N+V P++   +  
Sbjct: 153 GGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFL 212

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
               S       + +    GR A
Sbjct: 213 EKTSSSELLDR-LASDEAFGRAA 234

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  146 bits (371), Expect = 3e-44
 Identities = 32/194 (16%), Positives = 69/194 (35%), Gaps = 24/194 (12%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
            +G  + E+L +   +I A  +                 V VD+ +    +    +VG V
Sbjct: 14  TLGSAVKERLEKKAEVITA-GRHSG-------------DVTVDITNIDSIKKMYEQVGKV 59

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D +++    A F    ++  E          +   IN+  +   ++ D   +GS    + 
Sbjct: 60  DAIVSATGSATFSPLTELTPEK-NAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTG 115

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
           I  +  +      + +  A+ +  ++ A+E+    IR+N+V P V+     +        
Sbjct: 116 IMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVSPNVLEESWDKLEPFFEGF 174

Query: 203 AGPMLAKTPLGRFA 216
                   P  + A
Sbjct: 175 LP-----VPAAKVA 183

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  148 bits (375), Expect = 4e-44
 Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 9/201 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN----VQTVQVDLQDWARTRAAVSK 78
           G+G    E L+   A +I        L                V  D+ D     AA SK
Sbjct: 20  GLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSK 79

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           +      VD+LINNA +      ++++ EN    + D N+ +   +S+  +K MI     
Sbjct: 80  LDAEGIHVDILINNAGIQYRKPMVELELEN-WQKVIDTNLTSAFLVSRSAAKRMIARNSG 138

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G I+N+ S+  + A      Y+A+K  +  +T +MA E   +NI+ N++ P  ++T M  
Sbjct: 139 GKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNT 198

Query: 195 TGWSDPAKAGPMLAKTPLGRF 215
               D      + + TP  R+
Sbjct: 199 ALIEDKQFDSWVKSSTPSQRW 219

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  148 bits (376), Expect = 4e-44
 Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 12/204 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           GIG  +  +L+     ++         D+            +VD+ D  +  A V     
Sbjct: 40  GIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVA 99

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G VD L+ NA V      +D   E+  D +  +N++     ++  +  MI+    G+I
Sbjct: 100 AFGGVDKLVANAGVVHLASLIDTTVED-FDRVIAINLRGAWLCTKHAAPRMIERG-GGAI 157

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           VN+SS+AG+ A+ G   Y  SKA +  ++R  A EL    IR N++ P  V T M +T  
Sbjct: 158 VNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAM 217

Query: 198 SDPAKAGP-----MLAKTPLGRFA 216
           +    A        +     GR A
Sbjct: 218 AMFDGALGAGGARSMIARLQGRMA 241

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  147 bits (374), Expect = 6e-44
 Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 12/205 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV-- 79
           G G  + ++ ++  A ++ + + +A  + +          V  D+   A   AAV     
Sbjct: 20  GFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALS 79

Query: 80  --GPVDVLINNAAVARFDRFL-DIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK---I 133
             G VD+L+NNA +    +    ++ E   D I  VN++ V  ++  +     ++     
Sbjct: 80  KFGKVDILVNNAGIGHKPQNAELVEPEE-FDRIVGVNVRGVYLMTSKLIPHFKENGAKGQ 138

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM- 192
           +  I+NV+S            Y+A+K  + S+T+ +A+EL P  IRV ++ P    T + 
Sbjct: 139 ECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLL 198

Query: 193 -GRTGWSDPAKAGPMLAKTPLGRFA 216
               G              P+GR  
Sbjct: 199 TTFMGEDSEEIRKKFRDSIPMGRLL 223

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  147 bits (374), Expect = 8e-44
 Identities = 58/211 (27%), Positives = 94/211 (44%), Gaps = 20/211 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           G+GR +V++     A +  L K+   L  L+ A   N   V  D++     + A  +   
Sbjct: 16  GLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLA 75

Query: 80  --GPVDVLINNAAVARFDRFL-DIDEENLI---DSIFDVNIKAVINISQVVSKTMIDHKI 133
             G +D LI NA +  +   L D+ E+ +    D IF VN+K  I+  +     ++  + 
Sbjct: 76  AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSR- 134

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM- 192
            GS+V   S AG     G  +Y+A+K A+  + R MA EL P ++RVN V P  + T + 
Sbjct: 135 -GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HVRVNGVAPGGMNTDLR 192

Query: 193 -------GRTGWSDPAKAGPMLAKTPLGRFA 216
                       S    A  + +  P+GR  
Sbjct: 193 GPSSLGLSEQSISSVPLADMLKSVLPIGRMP 223

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  147 bits (373), Expect = 1e-43
 Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 32/224 (14%)

Query: 23  GIGRCIVEKLSQHEAIIIAL----------SKTQANLDSLKQAFPNVQ-------TVQVD 65
           G GR    +++   A IIA+              A+ D L +    V+          VD
Sbjct: 22  GQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVD 81

Query: 66  LQDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINIS 121
            +D+ R R  V       G +D+++ NA VA    + DI  E+    + D+N+    N  
Sbjct: 82  TRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDF-RDVMDINVTGTWNTV 140

Query: 122 QVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVN 181
              +  +I+    GSI+ +SS AG         Y+ASK A+  + R  A ELG ++IRVN
Sbjct: 141 MAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVN 200

Query: 182 SVQPTVVMTQM---------GRTGWSDPAKAGPMLAKTPLGRFA 216
           SV P  V T M         G+   ++P  +  +L        A
Sbjct: 201 SVHPGPVNTPMGSGDMVTAVGQAMETNPQLS-HVLTPFLPDWVA 243

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  147 bits (373), Expect = 1e-43
 Identities = 50/224 (22%), Positives = 79/224 (35%), Gaps = 32/224 (14%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPN-VQTVQVDLQDWART---- 72
            IG  I  +L Q    ++     S+  A   +  L  A        + DL   +      
Sbjct: 22  RIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCC 81

Query: 73  ----RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLI----------DSIFDVNIKAVI 118
                 +    G  DVL+NNA+       L  D+ N              +F  N  A +
Sbjct: 82  EDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPL 141

Query: 119 NISQVVSKTMIDH----KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELG 174
            + +  ++   +         S+VN+        L G  +Y+ +K AL  +TR  ALEL 
Sbjct: 142 FLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELA 201

Query: 175 PYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGK 218
           P +IRVN+V P + +                   K PLG+    
Sbjct: 202 PRHIRVNAVAPGLSLL----PPAMPQETQEEYRRKVPLGQSEAS 241

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  147 bits (373), Expect = 1e-43
 Identities = 59/217 (27%), Positives = 93/217 (42%), Gaps = 26/217 (11%)

Query: 23  GIGRCIVEKLSQHEAIII-------ALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAA 75
           GIGR      ++  A +         L +T+  + +   +  NV +V  D+   A     
Sbjct: 17  GIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEI 76

Query: 76  VSKV----GPVDVLINNAAVARFDR----FLDIDEENLIDSIFDVNIKAVINISQVVSKT 127
           +S      G +D+L+NNA  A  D           E+  D+  ++N+++VI +++     
Sbjct: 77  LSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESY-DATLNLNLRSVIALTKKAVPH 135

Query: 128 MIDHKIQGSIVNVSSIA-GKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 186
           +   K  G IVN+SSIA G  A      YS +KAA+D  TR  A++L  + IRVNS+ P 
Sbjct: 136 LSSTK--GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPG 193

Query: 187 VVMTQM-GRTGWSDPAKAGP------MLAKTPLGRFA 216
           +V T      G  +            M    P G   
Sbjct: 194 LVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMG 230

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  146 bits (372), Expect = 2e-43
 Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 24/214 (11%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG  +   L +  A ++   A S   A   +  +K    +   ++ D++          
Sbjct: 29  GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFD 88

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +     G +D+ ++N+ V  F    D+ EE   D +F +N +    +++   + + +   
Sbjct: 89  QAVAHFGHLDIAVSNSGVVSFGHLKDVTEE-EFDRVFSLNTRGQFFVAREAYRHLTE--- 144

Query: 134 QGSIVNVSSIAGKT-ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            G IV  SS   K  ++  H++YS SK A+DS  R  + + G   I VN+V P   +T M
Sbjct: 145 GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM 204

Query: 193 ----------GRTGWSDPAKAGPMLAKTPLGRFA 216
                       T ++   +       +PL R  
Sbjct: 205 FHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNG 238

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  146 bits (371), Expect = 2e-43
 Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 14/204 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN----VQTVQVDLQDWARTRAAVSK 78
           GIG+ +    ++  A +   ++    L  +             ++ D+    + R  + +
Sbjct: 43  GIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQ 102

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           +    G +D+ + NA +      LD+  E     I D N+  V   +Q  ++ M+D  + 
Sbjct: 103 MTGELGGIDIAVCNAGIVSVQAMLDMPLEE-FQRIQDTNVTGVFLTAQAAARAMVDQGLG 161

Query: 135 GSIVNVSSIAGKTALEGHTI--YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           G+I+  +S++G        +  Y  SKAA+  +T+ MA+EL P+ IRVNSV P  + T++
Sbjct: 162 GTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTEL 221

Query: 193 GRTGWSDPAKAGPMLAKTPLGRFA 216
                   A       K PLGR  
Sbjct: 222 VEPLADYHAL---WEPKIPLGRMG 242

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  145 bits (369), Expect = 3e-43
 Identities = 55/204 (26%), Positives = 85/204 (41%), Gaps = 15/204 (7%)

Query: 23  GIGRCIVEKLSQHEAII----IALSKTQANLDSLKQAFPNVQTVQVDL---QDWART-RA 74
           G+G     +     A +    +   +  A    L       +   +D+   +DW R    
Sbjct: 16  GLGAEAARQAVAAGARVVLADVLDEEGAATARELG---DAARYQHLDVTIEEDWQRVVAY 72

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           A  + G VD L+NNA ++          E     + ++N+  V    + V   M D    
Sbjct: 73  AREEFGSVDGLVNNAGISTGMFLETESVER-FRKVVEINLTGVFIGMKTVIPAMKDAG-G 130

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           GSIVN+SS AG   L   + Y ASK  +  +++  A+ELG   IRVNSV P +  T M  
Sbjct: 131 GSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-- 188

Query: 195 TGWSDPAKAGPMLAKTPLGRFAGK 218
           T  +   +       TP+GR   +
Sbjct: 189 TAETGIRQGEGNYPNTPMGRVGNE 212

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  145 bits (369), Expect = 3e-43
 Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 17/204 (8%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG+   E L++  A  ++  ++   A      +        +V VD+ D    +A   +
Sbjct: 20  GIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADR 79

Query: 79  V----GPVDVLINNAAVA---RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
                G +D L+NNAA+    + D  L ID E        VN+   +  ++ V K M   
Sbjct: 80  TLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYY-KKFMSVNLDGALWCTRAVYKKMTKR 138

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
              G+IVN SS A          Y  +K  ++ +T+ ++ ELG  NIR+N++ P  + T+
Sbjct: 139 G-GGAIVNQSSTAA---WLYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTE 194

Query: 192 MGRTGWSDPAKAGPMLAKTPLGRF 215
             RT          ++   PL R 
Sbjct: 195 ANRTTTPKEMVDD-IVKGLPLSRM 217

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  145 bits (368), Expect = 3e-43
 Identities = 48/206 (23%), Positives = 86/206 (41%), Gaps = 14/206 (6%)

Query: 23  GIGRCIVEKLSQHEAII----IALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVS 77
           G G  I  +       +    ++    +    +   A+   V  V+ D+ D     AA++
Sbjct: 13  GNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIA 72

Query: 78  KV----GPVDVLINNAAVARFDR---FLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
                 G +DVL+NNA +              E   D +  VN++ +    + V   M+ 
Sbjct: 73  ATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQ-FDKVMAVNVRGIFLGCRAVLPHMLL 131

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
               G IVN++S+A   A  G + Y+ SK A+  +T+++A++     IR N+V P ++ T
Sbjct: 132 QG-AGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIET 190

Query: 191 QMGRTGWSDPAKAGPMLAKTPLGRFA 216
            M +     P     +LA+ P     
Sbjct: 191 PMTQWRLDQPELRDQVLARIPQKEIG 216

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  146 bits (370), Expect = 3e-43
 Identities = 52/215 (24%), Positives = 88/215 (40%), Gaps = 25/215 (11%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIGR I  +L +  A ++     S   A   +  LK+       +Q D+   +   A   
Sbjct: 32  GIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFD 91

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           K     G +D +++N+ +  +   L++ +E   D +F++N +    ++Q   K       
Sbjct: 92  KAVSHFGGLDFVMSNSGMEVWCDELEVTQEL-FDKVFNLNTRGQFFVAQQGLKHCRRG-- 148

Query: 134 QGSIVNVSSIAG-KTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            G I+  SSIA   T +  H +Y+ SKAA++   R  A++ G   + VN + P  V T M
Sbjct: 149 -GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM 207

Query: 193 -----------GRTGWSDPAKAGPMLAKTPLGRFA 216
                      G  G         +    PL R  
Sbjct: 208 FDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIG 242

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  146 bits (370), Expect = 4e-43
 Identities = 55/203 (27%), Positives = 84/203 (41%), Gaps = 11/203 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV-- 79
           GIGR   E  +++ A ++     +     +          V+VD+       + V K   
Sbjct: 38  GIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTA 97

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G VDVL+NNA        + I EE   D I  VN+K +   S+ V   M  +   GSI
Sbjct: 98  KWGRVDVLVNNAGFGTTGNVVTIPEET-WDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSI 155

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM----G 193
           +N +S    +A+   T Y ASK A+ S+TR MA++     IRVN+V P  + +       
Sbjct: 156 INTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIF 215

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
                         A+  + R  
Sbjct: 216 AEAKDPAKLRSDFNARAVMDRMG 238

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  145 bits (369), Expect = 4e-43
 Identities = 42/203 (20%), Positives = 86/203 (42%), Gaps = 12/203 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDL---QDWAR-TRAAVSK 78
           GIG  IV       A ++   K ++   +L+Q  P    +  D+    D        + +
Sbjct: 20  GIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRR 79

Query: 79  VGPVDVLINNAAVARFDRFL-DIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
            G +D ++NNA      +   +   +     + ++N+     ++++    +   +  G++
Sbjct: 80  FGRLDCVVNNAGHHPPPQRPEETSAQG-FRQLLELNLLGTYTLTKLALPYLRKSQ--GNV 136

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           +N+SS+ G         Y A+K A+ ++T+ +AL+  PY +RVN + P  + T +     
Sbjct: 137 INISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELA 196

Query: 198 S----DPAKAGPMLAKTPLGRFA 216
           +      A     +   PLGR  
Sbjct: 197 ALMPDPRASIREGMLAQPLGRMG 219

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  145 bits (369), Expect = 5e-43
 Identities = 55/224 (24%), Positives = 81/224 (36%), Gaps = 32/224 (14%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPN-VQTVQVDLQDWARTRAAV 76
            IGR I  KL Q    ++     S   A    D L +   N     Q DL +     A+ 
Sbjct: 34  RIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASC 93

Query: 77  SKV--------GPVDVLINNAAVARFDRFLDIDEENLI---------DSIFDVNIKAVIN 119
            ++        G  DVL+NNA+       +  D E+             +   N  A   
Sbjct: 94  EEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFL 153

Query: 120 ISQVVSKTMIDHKI-----QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELG 174
           ++   ++              SIVN+            ++Y+  K AL  +T++ ALEL 
Sbjct: 154 LTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELA 213

Query: 175 PYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGK 218
           PY IRVN V P V +  +      +  K      K PLGR    
Sbjct: 214 PYGIRVNGVAPGVSLLPV---AMGEEEKDK-WRRKVPLGRREAS 253

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  145 bits (367), Expect = 6e-43
 Identities = 48/199 (24%), Positives = 86/199 (43%), Gaps = 18/199 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG  +V         ++A      +      A P++ TV  D+         V +    
Sbjct: 39  GIGAGLVRAYRDRNYRVVA-----TSRSIKPSADPDIHTVAGDISKPETADRIVREGIER 93

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            G +D L+NNA V     F+++ +E+  D    VN+    +I+Q  +  M+     G IV
Sbjct: 94  FGRIDSLVNNAGVFLAKPFVEMTQEDY-DHNLGVNVAGFFHITQRAAAEMLKQG-SGHIV 151

Query: 139 NVSSIAGKTALEGHT--IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG 196
           ++++      + G    + S +K  L+++TR++A+E     +RVN+V P V+ T M    
Sbjct: 152 SITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPM---- 207

Query: 197 WSDPAKAGPMLAKTPLGRF 215
                    +    P+GR 
Sbjct: 208 -HPAETHSTLAGLHPVGRM 225

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  145 bits (369), Expect = 6e-43
 Identities = 55/206 (26%), Positives = 87/206 (42%), Gaps = 15/206 (7%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG  I   L+     I              +  L      V  ++ DL D +  +A V 
Sbjct: 40  GIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVD 99

Query: 78  KV----GPVDVLINNAAVARFDR--FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
            V    G +D L+NNA +A   R  FLD+  EN  D+I  VN++  +  +Q V K M+  
Sbjct: 100 AVVAEFGRIDCLVNNAGIASIVRDDFLDLKPEN-FDTIVGVNLRGTVFFTQAVLKAMLAS 158

Query: 132 KIQ--GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
             +   SI+N++S++          Y  SKA L + ++ +AL L    I V  V+P ++ 
Sbjct: 159 DARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIR 218

Query: 190 TQMGRTGWSDPAKAGPMLAKTPLGRF 215
           + M     S            P+ R+
Sbjct: 219 SDMTAAV-SGKYDGLIESGLVPMRRW 243

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  144 bits (366), Expect = 7e-43
 Identities = 44/217 (20%), Positives = 89/217 (41%), Gaps = 25/217 (11%)

Query: 23  GIGRCIVEKLSQHE---AIIIALSKTQANLDSLKQAFP------NVQTVQVDLQDWARTR 73
           G GR +  +L++     ++++  +++++ L  LK+          V     DL   A  +
Sbjct: 17  GFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQ 76

Query: 74  AAVSKV--------GPVDVLINNAAVARFDRFLDIDEENL--IDSIFDVNIKAVINISQV 123
             +S V            +LINNAA         ++  +L  +++ + +N+ +++ ++  
Sbjct: 77  RLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSG 136

Query: 124 VSKTMIDHK-IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNS 182
                 D   +  ++VN+SS+      +G  +Y A KAA D + + +A E    ++RV S
Sbjct: 137 TLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLS 194

Query: 183 VQPTVVMTQMG---RTGWSDPAKAGPMLAKTPLGRFA 216
             P  +   M    R    DP     +      G   
Sbjct: 195 YAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALV 231

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  144 bits (366), Expect = 8e-43
 Identities = 47/208 (22%), Positives = 79/208 (37%), Gaps = 18/208 (8%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVS 77
           GIG       ++  A + +   K  AN+D    +      +      DL      +  V 
Sbjct: 18  GIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVD 77

Query: 78  KV----GPVDVLINNAAV-ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           +     G +DVLINNA          +ID+    D++ D NI++V+  ++     +    
Sbjct: 78  EFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFY-DAVMDANIRSVVMTTKFALPHLAAAA 136

Query: 133 IQ----GSIVNVSSIAGKTA-LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
                  ++++  SIAG T    G  +Y A+KA L ++ +          +R N V P  
Sbjct: 137 KASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGT 196

Query: 188 VMTQMGRTGWSDPAKAGPMLAKTPLGRF 215
           V T               +    P+GRF
Sbjct: 197 VDTAF--HADKTQDVRDRISNGIPMGRF 222

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  144 bits (366), Expect = 8e-43
 Identities = 50/217 (23%), Positives = 84/217 (38%), Gaps = 25/217 (11%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD----SLKQAFPNVQTVQVDLQDWARTRAAVSK 78
            IG     +L++    I  L   +  L+    S+++     ++   D+         V  
Sbjct: 18  NIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDS 77

Query: 79  V----GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           V    G +D L NNA     F    D   ++    +  +N+    ++ + VS+ MI    
Sbjct: 78  VVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDF-ARVLTINVTGAFHVLKAVSRQMITQN- 135

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN +S+AG         Y  SK A+ ++T T AL+L PYNIRVN++ P  +     
Sbjct: 136 YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFM 195

Query: 194 RTGWSDPAKAGP--------------MLAKTPLGRFA 216
                +                    M+   P+ R+ 
Sbjct: 196 WERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYG 232

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  144 bits (366), Expect = 8e-43
 Identities = 51/204 (25%), Positives = 89/204 (43%), Gaps = 17/204 (8%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
            IGR    + +Q  A ++     +   A   +  +++   +   ++ DL + A   AA+S
Sbjct: 19  DIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAIS 78

Query: 78  KV----GPVDVLINNAA-VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
                 G +  L++ A  +       ++DE      + DVN+ ++   ++     M    
Sbjct: 79  AAADKFGEIHGLVHVAGGLIARKTIAEMDEAF-WHQVLDVNLTSLFLTAKTALPKMAK-- 135

Query: 133 IQGSIVNVSSIAGKT-ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
             G+IV  SS AG+     G   Y+ SK A+ + TR +A E+GP  IRVN+V P ++ T 
Sbjct: 136 -GGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KIRVNAVCPGMISTT 193

Query: 192 MGRTGWSDPAKAGPMLAKTPLGRF 215
              T  + P     +   T L R 
Sbjct: 194 FHDTF-TKPEVRERVAGATSLKRE 216

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  144 bits (367), Expect = 8e-43
 Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 10/201 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL-KQAFPNVQTVQVDLQDWARTRAAVSKV-- 79
           GIG      L++  A ++     + +L               VDL +    RA +     
Sbjct: 22  GIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTID 81

Query: 80  --GPVDVLINNAAVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
             G +D++ NNAA +         +  +   D  F VN +  + + +     +I     G
Sbjct: 82  TFGRLDIVDNNAAHSDPADMLVTQMTVDV-WDDTFTVNARGTMLMCKYAIPRLISAG-GG 139

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT 195
           +IVN+SS     A +  T Y+ +KAA++++TR +A + G + +R N++ P +V T     
Sbjct: 140 AIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEV 199

Query: 196 GWSDPAKAGPMLAKTPLGRFA 216
           G   P            GR  
Sbjct: 200 GLPQPIVDI-FATHHLAGRIG 219

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  144 bits (365), Expect = 8e-43
 Identities = 50/204 (24%), Positives = 83/204 (40%), Gaps = 13/204 (6%)

Query: 23  GIGRCIVEKLSQHEAII----IALSKTQANLDSLKQAFPNVQTVQVDL---QDWART-RA 74
           GIG  I  K  +  A +          +    S+      +Q  Q D      W +   A
Sbjct: 17  GIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDA 75

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                GPV  L+NNA +A      +         +  VN+  V   +++  + M +  + 
Sbjct: 76  TEKAFGPVSTLVNNAGIAVNKSVEETTTAE-WRKLLAVNLDGVFFGTRLGIQRMKNKGLG 134

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELG--PYNIRVNSVQPTVVMTQM 192
            SI+N+SSI G         Y+ASK A+  ++++ AL+     Y++RVN+V P  + T +
Sbjct: 135 ASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPL 194

Query: 193 GRTGWSDPAKAGPMLAKTPLGRFA 216
                    +A     KTP+G   
Sbjct: 195 VD-DLPGAEEAMSQRTKTPMGHIG 217

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  145 bits (367), Expect = 9e-43
 Identities = 54/206 (26%), Positives = 96/206 (46%), Gaps = 15/206 (7%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG  +    ++    +    A ++  A+  + ++ ++      +  D+ + A   A  S
Sbjct: 37  GIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFS 96

Query: 78  KV----GPVDVLINNAAVARFD-RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            V    G +D L+NNA +  +  R  ++  E  I+ +  VN+   I  +    + M    
Sbjct: 97  AVDRQFGRLDGLVNNAGIVDYPQRVDEMSVER-IERMLRVNVTGSILCAAEAVRRMSRLY 155

Query: 133 IQ--GSIVNVSSIAGKTALEG-HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
               G+IVNVSS+A        +  Y+ASKAA+D+ T  +A E+    IRVN+V+P ++ 
Sbjct: 156 SGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIE 215

Query: 190 TQMGRTGWSDPAKAGPMLAKTPLGRF 215
           T +  +G   P +A  M    P+ R 
Sbjct: 216 TDLHASG-GLPDRAREMAPSVPMQRA 240

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  144 bits (366), Expect = 9e-43
 Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 21/213 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD----SLKQAFP-NVQTVQVDLQDWARTRAAVS 77
           GIG  I E  ++  A I+ +++    L     SLK+ F   V  V VD+       A V 
Sbjct: 18  GIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVE 77

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            V    G  D+L+NNA     +  ++  +E      +++ + A + +++ +   M     
Sbjct: 78  SVRSSFGGADILVNNAGTGSNETIMEAADEKW-QFYWELLVMAAVRLARGLVPGMRARG- 135

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G+I++ +SI     L    IY+ +KAAL   ++T+A E+   NIRVN + P +++T   
Sbjct: 136 GGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDW 195

Query: 194 RTGWSDPAKAGP----------MLAKTPLGRFA 216
                +  K                  P+ RFA
Sbjct: 196 IKTAKELTKDNGGDWKGYLQSVADEHAPIKRFA 228

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  145 bits (367), Expect = 1e-42
 Identities = 47/215 (21%), Positives = 90/215 (41%), Gaps = 25/215 (11%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIGR +  +L +    +I   A S   A   + ++K+   +   V+ ++           
Sbjct: 40  GIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE 99

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +     G +D++ +N+ V  F    D+  E   D +F +N +    +++   K +     
Sbjct: 100 EAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE-FDRVFTINTRGQFFVAREAYKHLEIG-- 156

Query: 134 QGSIVNVSSIAGK-TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            G ++ + SI G+  A+  H +YS SK A+++  R MA+++    I VN V P  + T M
Sbjct: 157 -GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM 215

Query: 193 -----------GRTGWSDPAKAGPMLAKTPLGRFA 216
                      G    ++       +  +PL R  
Sbjct: 216 YHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVG 250

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  144 bits (365), Expect = 2e-42
 Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 12/203 (5%)

Query: 23  GIGRCIVEKLSQHEA-IIIA---LSKTQANLDSLKQAFPN-VQTVQVDLQDWARTRAAVS 77
           GIG  I E   +H    +IA   L +       L  A       + +D++      AAV 
Sbjct: 38  GIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVD 97

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +     G +D+LIN AA         +       ++ D++     N+S+V+ +       
Sbjct: 98  QALKEFGRIDILINCAAGNFLCPAGALSFNA-FKTVMDIDTSGTFNVSRVLYEKFFRDH- 155

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN+++  G           ++KAA+D++TR +A+E GP NIRVNS+ P  +    G
Sbjct: 156 GGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEG 215

Query: 194 RTGWSDPAKAGP-MLAKTPLGRF 215
                 P  +    +  +PL R 
Sbjct: 216 LRRLGGPQASLSTKVTASPLQRL 238

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  141 bits (359), Expect = 6e-42
 Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 10/193 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           G+G  IV+ LS+ + I+ AL +   +L +L +    V+ ++ D+         V K+   
Sbjct: 16  GMGIEIVKDLSR-DHIVYALGRNPEHLAALAEI-EGVEPIESDIVKEVLEEGGVDKLKNL 73

Query: 80  GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVN 139
             VD L++ AAVAR              +  D+N+     +S+ +   +      G ++ 
Sbjct: 74  DHVDTLVHAAAVARDTTIEAGSVAEW-HAHLDLNVIVPAELSRQLLPALRAAS--GCVIY 130

Query: 140 VSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD 199
           ++S AG     G+TIY+ASK AL  +      E     IRV++V P    T M + G  D
Sbjct: 131 INSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQ-GLMD 189

Query: 200 PAKAGPMLAKTPL 212
                    +  +
Sbjct: 190 SQGTN-FRPEIYI 201

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  142 bits (361), Expect = 7e-42
 Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 8/199 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD---SLKQAFPNVQTVQVDLQDWARTRAAVSKV 79
           GIGR I    ++  A ++A  +T    +    +     + + V  DL D         ++
Sbjct: 42  GIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEEL 101

Query: 80  ---GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
                VDVL+NNA +       ++        +  VN+ A   +S+     M+ H   G 
Sbjct: 102 AATRRVDVLVNNAGIIARAPAEEVSLGR-WREVLTVNLDAAWVLSRSFGTAMLAHG-SGR 159

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG 196
           IV ++S+           Y+ASK A+  +TR +A E     + VN++ P  V+T      
Sbjct: 160 IVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAAL 219

Query: 197 WSDPAKAGPMLAKTPLGRF 215
            +D  +A  + A+ P GR+
Sbjct: 220 RADDERAAEITARIPAGRW 238

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  142 bits (360), Expect = 8e-42
 Identities = 57/199 (28%), Positives = 86/199 (43%), Gaps = 14/199 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDL---QDWART-RAAVS 77
           G+G   V  +    A ++          ++        + V +D+     W      AV+
Sbjct: 18  GMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVT 77

Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G + VL+NNA +       D         I DVN+  V    + V K M +   +GSI
Sbjct: 78  AFGGLHVLVNNAGILNIGTIEDYALTE-WQRILDVNLTGVFLGIRAVVKPMKEAG-RGSI 135

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           +N+SSI G         Y+A+K A+  +T++ ALELGP  IRVNS+ P +V T M     
Sbjct: 136 INISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT---- 191

Query: 198 SDPAKAGPMLAKTPLGRFA 216
                    + +T LGR A
Sbjct: 192 ---DWVPEDIFQTALGRAA 207

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  142 bits (361), Expect = 8e-42
 Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 27/229 (11%)

Query: 23  GIGRCIVEKLSQHEAIIIAL-------------SKTQANLD----SLKQAFPNVQTVQVD 65
           G GR    +L+   A IIA                +  +LD     ++       T  +D
Sbjct: 26  GQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLD 85

Query: 66  LQDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINIS 121
           ++D A  R  V+      G +DV++ NA V  + R  ++ +E   D++  VN+       
Sbjct: 86  VRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQW-DTVIGVNLTGTWRTL 144

Query: 122 QVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVN 181
           +     MI+    GSIV VSS AG  A  G+  YSASK  L ++T T+A+ELG Y IRVN
Sbjct: 145 RATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVN 204

Query: 182 SVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLP 230
           S+ P  V T M      +P     + A+ P    +    P   N ++  
Sbjct: 205 SIHPYSVETPMI-----EPEAMMEIFARHPSFVHSFPPMPVQPNGFMTA 248

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  141 bits (358), Expect = 1e-41
 Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 14/181 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ-------AFPNVQTVQVDLQDWARTRAA 75
           GIG  I   L+     ++ +++++ NL+ +                + +D+ D  +    
Sbjct: 18  GIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTE 77

Query: 76  VSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
           +  +    G VD+L+N AA+       +  +      I ++N+ A   I + V++ M   
Sbjct: 78  IKDIHQKYGAVDILVNAAAMFMDGSLSEPVDN--FRKIMEINVIAQYGILKTVTEIMKVQ 135

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
           K  G I NV+S A K       IY ++K AL  +  ++  EL P  IRV ++ P  V T 
Sbjct: 136 K-NGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD 194

Query: 192 M 192
           M
Sbjct: 195 M 195

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  142 bits (360), Expect = 3e-41
 Identities = 55/226 (24%), Positives = 93/226 (41%), Gaps = 25/226 (11%)

Query: 23  GIGRCIVEKLSQHEAIIIAL------------SKTQANLDSLKQAFPN----VQTVQVDL 66
           G GR    +L+Q  A I+A+              +   L    +        +   Q D+
Sbjct: 57  GQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADV 116

Query: 67  QDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQ 122
           +D A  +A V +     G +D+L++N  ++     + + ++   D +   N+    +  +
Sbjct: 117 RDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDIL-QTNLIGAWHACR 175

Query: 123 VVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNS 182
            V  +MI+    GS++ VSS  G     G + Y+ASK  +  +  ++A E+G +NIRVNS
Sbjct: 176 AVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNS 235

Query: 183 VQPTVVMTQM----GRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPW 224
           V P  V T+M           P    P             L P PW
Sbjct: 236 VNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPW 281

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  140 bits (355), Expect = 3e-41
 Identities = 36/204 (17%), Positives = 71/204 (34%), Gaps = 15/204 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
             G     +LS+    +    ++    D L+         Q+           +  V   
Sbjct: 12  FGGMGSALRLSEAGHTVACHDESFKQKDELEAF--AETYPQLKPMSEQEPAELIEAVTSA 69

Query: 80  -GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
            G VDVL++N   A  F        E+      +        +   V+  M   K  G I
Sbjct: 70  YGQVDVLVSNDIFAPEFQPIDKYAVEDY-RGAVEALQIRPFALVNAVASQMKKRK-SGHI 127

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM----- 192
           + ++S       +  + Y++++A   ++   ++ ELG YNI V ++ P  + ++      
Sbjct: 128 IFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFY 187

Query: 193 -GRTGWSDPAKAGPMLAKTPLGRF 215
                 ++P     +   T L R 
Sbjct: 188 PTEPWKTNPEHVAHVKKVTALQRL 211

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  140 bits (356), Expect = 3e-41
 Identities = 46/207 (22%), Positives = 84/207 (40%), Gaps = 23/207 (11%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIGR I E+     + +I L                   ++ D+ +  + +A++  +   
Sbjct: 19  GIGRAIAERFVDEGSKVIDL-------SIHDPGEAKYDHIECDVTNPDQVKASIDHIFKE 71

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            G + VL+NNA +  + +   +        I DVN+      S+     MI  +   SIV
Sbjct: 72  YGSISVLVNNAGIESYGKIESMSMGEW-RRIIDVNLFGYYYASKFAIPYMIRSR-DPSIV 129

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS 198
           N+SS+      +  + Y  SK A+  +T+++AL+  P  +R N+V P  + T + R    
Sbjct: 130 NISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNAVCPATIDTPLVRKAAE 188

Query: 199 DPAKAGP---------MLAKTPLGRFA 216
               + P            + P+ R  
Sbjct: 189 LEVGSDPMRIEKKISEWGHEHPMQRIG 215

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  139 bits (353), Expect = 4e-41
 Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 6/174 (3%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG      L      +  +++ +  L +L         +  D+++      AV+ +   
Sbjct: 16  GIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEA 75

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            G +  L+NNA V       ++  E     + D N+       +     ++     G+IV
Sbjct: 76  FGELSALVNNAGVGVMKPVHELTLEE-WRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIV 133

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           NV S+AGK   +G   Y+ASK  L  +     L+L   N+RV +V P  V T  
Sbjct: 134 NVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGF 187

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  139 bits (353), Expect = 5e-41
 Identities = 46/208 (22%), Positives = 81/208 (38%), Gaps = 22/208 (10%)

Query: 23  GIGRCIVEKLSQHEA---IIIALSKTQANLDSLKQAFPNVQT--VQVDL-QDWARTRAAV 76
           GIG     +L +      +I+   +    L  LK   P V       D+    A ++  +
Sbjct: 16  GIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLL 75

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            K+      VD+LIN A +           ++ I+    +N   ++N +  +       K
Sbjct: 76  KKIFDQLKTVDILINGAGILD---------DHQIERTIAINFTGLVNTTTAILDFWDKRK 126

Query: 133 I--QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
               G I N+ S+ G  A+    +YSASKAA+ S T ++A       +   S+ P +  T
Sbjct: 127 GGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRT 186

Query: 191 QMGRTGWSDPAKAGPMLAKTPLGRFAGK 218
            +  T ++      P +A+  L      
Sbjct: 187 PLVHT-FNSWLDVEPRVAELLLSHPTQT 213

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  139 bits (352), Expect = 8e-41
 Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 13/205 (6%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIGR I +K + +++  + + L + + N  +  L+     V  V+ D+         V +
Sbjct: 18  GIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRR 77

Query: 79  V----GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                  +DVL NNA +        ++ +E   + +  VN+ +    S+ V   M+    
Sbjct: 78  TFETYSRIDVLCNNAGIMDGVTPVAEVSDELW-ERVLAVNLYSAFYSSRAVIPIMLKQG- 135

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           +G IVN +SIAG         Y+ +K  L  +TR++A   G   IR  +V P  V T +G
Sbjct: 136 KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIG 195

Query: 194 RTGW--SDPAKAGPMLAKTPLGRFA 216
                 S+          +   R A
Sbjct: 196 LGSSKPSELGMRTLTKLMSLSSRLA 220

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  139 bits (353), Expect = 9e-41
 Identities = 47/211 (22%), Positives = 89/211 (42%), Gaps = 19/211 (9%)

Query: 23  GIGRCIVEKLSQHEAII----IALSKTQANLDSLKQAFPNVQ--TVQVDLQDWARTRAAV 76
           G+GR    +L+   A +    ++    +A+  ++ +  P+ +  T   D+ D A+  A V
Sbjct: 24  GLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYV 83

Query: 77  SKV----GPVDVLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
           +      G +D   NNA +  + +           D +  +N++ V    + V K M + 
Sbjct: 84  TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEF-DKVVSINLRGVFLGLEKVLKIMREQ 142

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
              G +VN +S+ G   +   + Y+A+K  +  +TR  A+E G Y IR+N++ P  + T 
Sbjct: 143 G-SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTP 201

Query: 192 MGRTGWSDPAKAGP------MLAKTPLGRFA 216
           M            P       +   P  R+ 
Sbjct: 202 MVENSMKQLDPENPRKAAEEFIQVNPSKRYG 232

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  140 bits (354), Expect = 2e-40
 Identities = 44/208 (21%), Positives = 83/208 (39%), Gaps = 18/208 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPN-----VQTVQVDLQDWARTR 73
           GIG+ IV++L +  + ++  S+    L S    L+   P      V  +Q ++++     
Sbjct: 29  GIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVN 88

Query: 74  AAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMI 129
             V       G ++ L+NN           I  +    ++ + N+     + + V  + +
Sbjct: 89  NLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKG-WHAVLETNLTGTFYMCKAVYSSWM 147

Query: 130 DHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
                GSIVN+     K          A++A + ++T+++ALE     IR+N V P V+ 
Sbjct: 148 KEH-GGSIVNIIV-PTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIY 205

Query: 190 TQMG--RTGWSDPAKAGPMLAKTPLGRF 215
           +Q      G    +       K P  R 
Sbjct: 206 SQTAVENYGSWGQSFFEGSFQKIPAKRI 233

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  138 bits (351), Expect = 2e-40
 Identities = 52/226 (23%), Positives = 85/226 (37%), Gaps = 26/226 (11%)

Query: 23  GIGRCIVEKLSQHEAIIIAL------------SKTQANLDSLKQAFPN----VQTVQVDL 66
           G+GR     L++  A I                 T  +L               + +VD+
Sbjct: 21  GMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDV 80

Query: 67  QDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQ 122
           +D A   + V++     G +D+ I NA ++      +++     + I   N+    N   
Sbjct: 81  KDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVI-GTNLTGTFNTIA 139

Query: 123 VVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNS 182
            V+  MI     G IV VSS+ G +A      Y +SK  +  +T+  A +L  Y I VN+
Sbjct: 140 AVAPGMIKRN-YGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNA 198

Query: 183 VQPTVVMTQM----GRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPW 224
           V P  + T M       G   P    P L        +  L+  P+
Sbjct: 199 VAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF 244

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  136 bits (346), Expect = 3e-40
 Identities = 33/188 (17%), Positives = 73/188 (38%), Gaps = 5/188 (2%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV-G 80
           G+G  + +             ++++ L ++      NV     DL           ++  
Sbjct: 12  GLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDS 71

Query: 81  PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNV 140
               ++++A    F    + D E  I ++ + N+ + IN+ + + K   D     ++V +
Sbjct: 72  IPSTVVHSAGSGYFGLLQEQDPEQ-IQTLIENNLSSAINVLRELVKRYKDQP--VNVVMI 128

Query: 141 SSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP 200
            S A +      + Y A K A+  +  ++ LEL    +++ +V P  + T+   T     
Sbjct: 129 MSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSGKSL 188

Query: 201 AKAGPMLA 208
             +  M A
Sbjct: 189 DTSSFMSA 196

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  138 bits (350), Expect = 5e-40
 Identities = 67/227 (29%), Positives = 97/227 (42%), Gaps = 26/227 (11%)

Query: 23  GIGRCIVEKLSQHEAIIIAL------------SKTQANLDS----LKQAFPNVQTVQVDL 66
           G GR     L++  A IIA+              T  +L      ++     +   QVD+
Sbjct: 39  GQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV 98

Query: 67  QDWARTRAAVSKV----GPVDVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINIS 121
           +D+   +AAV       G +D+++ NAA+A    R   +D +     + DVN+      +
Sbjct: 99  RDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTW-RDMIDVNLNGAWITA 157

Query: 122 QVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVN 181
           +V    ++  K  GSIV  SSI G    E    Y ASK  L  + RTMALELGP NIRVN
Sbjct: 158 RVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVN 217

Query: 182 SVQPTVVMTQM----GRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPW 224
            V P+ V T M           P    P +    +      + P P+
Sbjct: 218 IVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPY 264

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  137 bits (348), Expect = 5e-40
 Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 22/207 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDL---QDWART-RAAVSK 78
           GIG  +V+ L ++ A +++      +  S           ++D+   ++          K
Sbjct: 25  GIGLAVVDALVRYGAKVVS---VSLDEKSDVNV---SDHFKIDVTNEEEVKEAVEKTTKK 78

Query: 79  VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            G +D+L+NNA + ++        E     I DVN+     +++     M+     GSI+
Sbjct: 79  YGRIDILVNNAGIEQYSPLHLTPTEIW-RRIIDVNVNGSYLMAKYTIPVMLAIG-HGSII 136

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS 198
           N++S+    A +    Y  SK AL  +TR++A++  P  IR N+V P  +MT M      
Sbjct: 137 NIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAK 195

Query: 199 DPAKAGP---------MLAKTPLGRFA 216
                              + P+GR  
Sbjct: 196 MEVGEDENAVERKIEEWGRQHPMGRIG 222

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  137 bits (348), Expect = 6e-40
 Identities = 46/203 (22%), Positives = 87/203 (42%), Gaps = 12/203 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----NVQTVQVDLQDWARTRAAVS 77
           G+G  I + L++    ++  S+         Q             + D+ ++   +  + 
Sbjct: 32  GLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE 91

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            V    G +D ++N A + R     +   +     + +VN+     + +     + +   
Sbjct: 92  AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEF-RQVIEVNLFGTYYVCREAFSLLRESD- 149

Query: 134 QGSIVNVSSIAG-KTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             SI+N+ S+   +  +   + Y+ASK  + S+T+ +A E G Y IRVN + P    T+M
Sbjct: 150 NPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKM 209

Query: 193 GRTGWSDPAKAGPMLAKTPLGRF 215
               +SDP K   ML + PLGR 
Sbjct: 210 TEAVFSDPEKLDYMLKRIPLGRT 232

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  137 bits (348), Expect = 6e-40
 Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 12/204 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ---AFPNVQTVQVDLQDWARTRAAVSKV 79
           GIG+ I + L +  A +   ++             A+ + Q +  DL   A  R     +
Sbjct: 40  GIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQAL 99

Query: 80  ----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ- 134
                 +D+L+NNA  +              + +  +N+ +V +  Q +   +       
Sbjct: 100 GELSARLDILVNNAGTSWGAALESYPVSGW-EKVMQLNVTSVFSCIQQLLPLLRRSASAE 158

Query: 135 --GSIVNVSSIAGKTALEGHTI-YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
               ++N+ S+AG +A+      Y  SKAAL  ++R +A EL   +I VN + P    ++
Sbjct: 159 NPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSR 218

Query: 192 MGRTGWSDPAKAGPMLAKTPLGRF 215
           M R   +DP       A  P+GR+
Sbjct: 219 MTRHIANDPQALEADSASIPMGRW 242

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  136 bits (346), Expect = 7e-40
 Identities = 42/198 (21%), Positives = 84/198 (42%), Gaps = 7/198 (3%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           GIG+ I  +L+   A +I          +   +     + +  D+ D    +A  +++  
Sbjct: 17  GIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQA 76

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G +D+L+NNA++  F  + D+D ++    I DVN+     +++  +  M      G +
Sbjct: 77  LTGGIDILVNNASIVPFVAWDDVDLDHW-RKIIDVNLTGTFIVTRAGTDQMRAAGKAGRV 135

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           ++++S            Y A+K  +   TR +A ELG YNI  N+V P ++ +   +   
Sbjct: 136 ISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKAS- 194

Query: 198 SDPAKAGPMLAKTPLGRF 215
                 G +     +   
Sbjct: 195 PHNEAFGFVEMLQAMKGK 212

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  136 bits (344), Expect = 9e-40
 Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 18/199 (9%)

Query: 23  GIGRCIVEKLSQHEA-------IIIALSKTQANLDSLKQAFPN----VQTVQVDLQDWAR 71
           GIGR I  + ++          +++  S+T A+L+ +            T+  D+ D A 
Sbjct: 13  GIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMAD 72

Query: 72  TRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT 127
            R   + +    G +D L+NNA V RF    D+ EE+  D   + N+K    ++Q +   
Sbjct: 73  VRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDF-DYTMNTNLKGTFFLTQALFAL 131

Query: 128 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
           M      G I  ++S+A   A    +IY  SK     +  TM L     N+R+  VQP  
Sbjct: 132 MERQH-SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGA 190

Query: 188 VMTQMGRTGWSDPAKAGPM 206
           V T M      D  +A  M
Sbjct: 191 VYTPMWGK-VDDEMQALMM 208

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  136 bits (346), Expect = 1e-39
 Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 19/210 (9%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQA--NLDSLKQAFP-NVQTVQVDLQDWARTRAAVS 77
           GIG      ++   A   +I  S   A    + + + F    +  Q D+ +       + 
Sbjct: 25  GIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ 84

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           ++    GP+  LI NA V+      ++  E+    ++DVN+  V N  + V+K  +  + 
Sbjct: 85  QIDADLGPISGLIANAGVSVVKPATELTHEDF-AFVYDVNVFGVFNTCRAVAKLWLQKQQ 143

Query: 134 QGSIVNVSSIAGKTALE-------GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 186
           +GSIV  SS++ +   +           Y++SKAA  ++ + +A E     IRVN++ P 
Sbjct: 144 KGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPG 203

Query: 187 VVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 216
            V T    T   D        +  PL RFA
Sbjct: 204 YVNTDQ--TAHMDKKIRDHQASNIPLNRFA 231

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  136 bits (345), Expect = 2e-39
 Identities = 60/242 (24%), Positives = 86/242 (35%), Gaps = 51/242 (21%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPN-VQTVQVDLQDWARTR--- 73
            +GR I E L      +      S  +AN    +L    PN   TVQ DL + A      
Sbjct: 20  RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSG 79

Query: 74  ------------------AAVSKVGPVDVLINNAAVARFDRFLDIDEE------------ 103
                             A  +  G  DVL+NNA+       L  DE+            
Sbjct: 80  ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM 139

Query: 104 -NLIDSIFDVNIKAVINISQVVSKTMIDHKIQ-----GSIVNVSSIAGKTALEGHTIYSA 157
                 +F  N  A   + +  +  +     +      SI+N+        L G+TIY+ 
Sbjct: 140 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTM 199

Query: 158 SKAALDSITRTMALELGPYNIRVNSVQP-TVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 216
           +K AL+ +TR+ ALEL P  IRVN V P   V+              G   +K PL +  
Sbjct: 200 AKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV----DDMPPAVWEG-HRSKVPLYQRD 254

Query: 217 GK 218
             
Sbjct: 255 SS 256

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  136 bits (344), Expect = 2e-39
 Identities = 48/214 (22%), Positives = 80/214 (37%), Gaps = 29/214 (13%)

Query: 23  GIGRCIVEKLSQHEAII----IALSKTQANLDSLKQAFP--NVQTVQVDLQDWARTRAAV 76
           GIGR   E L    A +      L        +L + F       +Q D+ D  + R   
Sbjct: 18  GIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTF 77

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            KV    G +D+L+NNA V     +         +    +N+ +VI+ + +    M    
Sbjct: 78  RKVVDHFGRLDILVNNAGVNNEKNW---------EKTLQINLVSVISGTYLGLDYMSKQN 128

Query: 133 I--QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMAL--ELGPYNIRVNSVQPTVV 188
               G I+N+SS+AG   +    +Y ASK  +   TR+ AL   L    +R+N++ P  V
Sbjct: 129 GGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFV 188

Query: 189 MTQMGRTGWSDPAKAGP------MLAKTPLGRFA 216
            T +  +   +            +          
Sbjct: 189 NTAILESIEKEENMGQYIEYKDHIKDMIKYYGIL 222

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  134 bits (341), Expect = 2e-39
 Identities = 48/199 (24%), Positives = 83/199 (41%), Gaps = 11/199 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTR---AAVSKV 79
           GIGR I E L      +        N +   Q+      +  DL+          A+  +
Sbjct: 13  GIGRAIAEALVARGYRVAI---ASRNPEEAAQSL-GAVPLPTDLEKDDPKGLVKRALEAL 68

Query: 80  GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVN 139
           G + VL++ AAV      L++  E     +  +++     ++Q  +  M +    G ++ 
Sbjct: 69  GGLHVLVHAAAVNVRKPALELSYEEW-RRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLF 126

Query: 140 VSSIAGKTALE--GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           + S+   TA        Y+ +K AL  +TR +A E     IRVN + P  V T+      
Sbjct: 127 IGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLR 186

Query: 198 SDPAKAGPMLAKTPLGRFA 216
            +P    P+ A+ P+GR+A
Sbjct: 187 QNPELYEPITARIPMGRWA 205

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  136 bits (345), Expect = 2e-39
 Identities = 58/237 (24%), Positives = 84/237 (35%), Gaps = 41/237 (17%)

Query: 23  GIGRCIVEKLSQHEAIIIAL------------SKTQANLDSLKQAF----PNVQTVQVDL 66
           G GR    KL++  A II                T  +L+              T +VD+
Sbjct: 21  GQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDV 80

Query: 67  QDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQ 122
           +D A     ++      G +DV++ NA +      L +         FDV+   VIN   
Sbjct: 81  RDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQA---FADAFDVDFVGVINTVH 137

Query: 123 VVSKTMIDHKIQGSIVNVSSIAGKTALE-----------GHTIYSASKAALDSITRTMAL 171
                +       SI+   S+AG  A             G   YS +K  +DS T  +A 
Sbjct: 138 AALPYLTS---GASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAA 194

Query: 172 ELGPYNIRVNSVQPTVVMTQM----GRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPW 224
           +L P +IR N + PT V T M           P    P  A   L   A +  P P+
Sbjct: 195 QLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPTPY 251

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  136 bits (344), Expect = 3e-39
 Identities = 41/204 (20%), Positives = 77/204 (37%), Gaps = 15/204 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----NVQTVQVDLQDWARTRAAVS 77
           G+GR I + LS     ++   +    LD+            V+ V  D+ D  +  A  +
Sbjct: 44  GVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFA 103

Query: 78  KV----GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            V      +D+L+NNA          ++  E   + I   N+      +Q   + M    
Sbjct: 104 AVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQ-WNGIVAANLTGAFLCTQHAFRMMKAQT 162

Query: 133 IQ-GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
            + G I+N  SI+ +T       Y+A+K A+  +T++ AL+   ++I    +      T 
Sbjct: 163 PRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATD 222

Query: 192 MGRTGWSDPAKAGPMLAKTPLGRF 215
           M     +   +A     +      
Sbjct: 223 MTARMSTGVLQA---NGEVAAEPT 243

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  135 bits (343), Expect = 4e-39
 Identities = 48/206 (23%), Positives = 73/206 (35%), Gaps = 14/206 (6%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIGR      ++  A  ++ A +        D +         +  D+ D A   A V  
Sbjct: 19  GIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVEL 78

Query: 79  V----GPVDVLINNAAV-ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                G +D   NNA           +  E       D N+ +    ++     +     
Sbjct: 79  AVRRFGGLDTAFNNAGALGAMGEISSLSVEG-WRETLDTNLTSAFLAAKYQVPAIAALG- 136

Query: 134 QGSIVNVSSIAGKT-ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            GS+   SS  G T    G   Y+ASKA L  + + +A+ELG   IRVN++ P    T  
Sbjct: 137 GGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPA 196

Query: 193 GRTGW--SDPAKAGPMLAKTPLGRFA 216
                  + P   G +     L R A
Sbjct: 197 NFANLPGAAPETRGFVEGLHALKRIA 222

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  136 bits (344), Expect = 6e-39
 Identities = 60/242 (24%), Positives = 86/242 (35%), Gaps = 51/242 (21%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPN-VQTVQVDLQDWARTR--- 73
            +GR I E L      +      S  +AN    +L    PN   TVQ DL + A      
Sbjct: 57  RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSG 116

Query: 74  ------------------AAVSKVGPVDVLINNAAVARFDRFLDIDEE------------ 103
                             A  +  G  DVL+NNA+       L  DE+            
Sbjct: 117 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM 176

Query: 104 -NLIDSIFDVNIKAVINISQVVSKTMIDHKIQ-----GSIVNVSSIAGKTALEGHTIYSA 157
                 +F  N  A   + +  +  +     +      SI+N+        L G+TIY+ 
Sbjct: 177 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTM 236

Query: 158 SKAALDSITRTMALELGPYNIRVNSVQP-TVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 216
           +K AL+ +TR+ ALEL P  IRVN V P   V+              G   +K PL +  
Sbjct: 237 AKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV----DDMPPAVWEG-HRSKVPLYQRD 291

Query: 217 GK 218
             
Sbjct: 292 SS 293

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  134 bits (339), Expect = 7e-39
 Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 13/204 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDL---QDWART-RAAVS 77
           G+G  +V+ L    A +      +A    L          V+ D+    DW     A   
Sbjct: 17  GVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQR 76

Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           ++G ++VL+NNA +           E+    +  +N ++V    Q     M +    GSI
Sbjct: 77  RLGTLNVLVNNAGILLPGDMETGRLEDF-SRLLKINTESVFIGCQQGIAAMKETG--GSI 133

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP--YNIRVNSVQPTVVMTQMGRT 195
           +N++S++    +E +  YSASKAA+ ++TR  AL      Y IRVNS+ P  + T M + 
Sbjct: 134 INMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA 193

Query: 196 GWSD---PAKAGPMLAKTPLGRFA 216
                               GR  
Sbjct: 194 SLPKGVSKEMVLHDPKLNRAGRAY 217

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  135 bits (341), Expect = 8e-39
 Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 40/231 (17%)

Query: 23  GIGRCIVEKLSQHEAIIIAL----------------SKTQANLDS----LKQAFPNVQTV 62
           G GR    +L+Q  A IIA+                + T  +L      +K     + T 
Sbjct: 22  GQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTA 81

Query: 63  QVDLQDWARTRAAVSKV----GPVDVLINNAAVARFDRFL-DIDEENLIDSIFDVNIKAV 117
           +VD++D+   +AAV       G +D+++ NA +      L    EE+    + D+N+  V
Sbjct: 82  EVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDW-TEMIDINLAGV 140

Query: 118 INISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYN 177
               +     MI     GSI+  SS+ G  A      Y A+K  +  + R   +ELG + 
Sbjct: 141 WKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHM 200

Query: 178 IRVNSVQPTVVMTQM--------------GRTGWSDPAKAGPMLAKTPLGR 214
           IRVNSV PT V T M                 G  D A    M    P+  
Sbjct: 201 IRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPW 251

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  135 bits (341), Expect = 1e-38
 Identities = 40/205 (19%), Positives = 81/205 (39%), Gaps = 16/205 (7%)

Query: 23  GIGRCIVEKLSQHEAIII-------ALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAA 75
           GIG     + ++  A ++       AL +    ++ L+    +   V  D++        
Sbjct: 42  GIGLATATEFARRGARLVLSDVDQPALEQA---VNGLRGQGFDAHGVVCDVRHLDEMVRL 98

Query: 76  VSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
             +     G VDV+ +NA +        ++ ++    + D+++   I+  +     +++ 
Sbjct: 99  ADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDD-WRWVIDIDLWGSIHAVEAFLPRLLEQ 157

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
              G I   +S AG     G   Y  +K  +  +  T+A E+ P  I V+ + P VV T+
Sbjct: 158 GTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETK 217

Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFA 216
           +          A   ++ TP G F 
Sbjct: 218 LVSNSERIRG-ADYGMSATPEGAFG 241

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  134 bits (339), Expect = 1e-38
 Identities = 37/200 (18%), Positives = 72/200 (36%), Gaps = 9/200 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL-KQAFPNVQTVQVDLQDWARTRAAVSKV-- 79
           G+GR +   L+     +    +    L     +   +   V  D+ D    RA  +    
Sbjct: 39  GVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVE 98

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ-GS 136
             G VDVL NNA        ++         + D N+      +Q   + M   + + G 
Sbjct: 99  KFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGR 158

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG 196
           I+N  SI+  +       Y+A+K A+  +T++ +L+   ++I    +      T M +  
Sbjct: 159 IINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKM 218

Query: 197 WSDPAKAGPMLAKTPLGRFA 216
            +   +A        +    
Sbjct: 219 KAGVPQA---DLSIKVEPVM 235

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  133 bits (337), Expect = 2e-38
 Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 14/198 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN----VQTVQVDLQDWARTRAAVSK 78
           GIG  I  KL    A ++  ++    L ++++         ++   DL       A  + 
Sbjct: 40  GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATG 99

Query: 79  V----GPVDVLINNAAVARFDRFL-DIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           V    G  DVL+NNA V  F   L  +      D++  VN+KA   + +  +  MI  K 
Sbjct: 100 VLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEW-DALIAVNLKAPYLLLRAFAPAMIAAK- 157

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           +G I+N+SS+AGK  +     Y+ASK  L+ +  + A EL  + +RV+ V P  V T+ G
Sbjct: 158 RGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFG 217

Query: 194 RTGWSDPAKAGPMLAKTP 211
                  AK   + A  P
Sbjct: 218 V---GLSAKKSALGAIEP 232

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  132 bits (335), Expect = 2e-38
 Identities = 44/202 (21%), Positives = 83/202 (41%), Gaps = 18/202 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAA 75
           GIG       + H A ++ L +T+A+L  +           P +  + ++     + R  
Sbjct: 25  GIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYREL 84

Query: 76  VSKV----GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
            ++V    G +D L++NA++         + +E+    +  VN+ A   +++ +   +  
Sbjct: 85  AARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDF-MQVMHVNVNATFMLTRALLPLLKR 143

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL-GPYNIRVNSVQPTVVM 189
            +   SI   SS  G+        Y  SK A + + +T+A EL G   +R NS+ P    
Sbjct: 144 SE-DASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATR 202

Query: 190 TQMGRTGWSDPAKAGPMLAKTP 211
           T M    + D     P+    P
Sbjct: 203 TGMRAQAYPDEN---PLNNPAP 221

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  132 bits (335), Expect = 2e-38
 Identities = 34/201 (16%), Positives = 65/201 (32%), Gaps = 23/201 (11%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
            +G  +V+         I++   +              +  +        ++ + K+   
Sbjct: 33  ALGAEVVKFFKSKSWNTISIDFRENPNAD--------HSFTIKDSGEEEIKSVIEKINSK 84

Query: 80  -GPVDVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
              VD  +  A      +   D   ++ +  + D+N+ +    + + +K +      G  
Sbjct: 85  SIKVDTFVCAAGGWSGGNASSDEFLKS-VKGMIDMNLYSAFASAHIGAKLLNQG---GLF 140

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELG--PYNIRVNSVQPTVVMTQMGRT 195
           V   + A      G   Y A+KAA   I + +A E G  P       + P  + T   R 
Sbjct: 141 VLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRK 200

Query: 196 GWSDPAKAGPMLAKTPLGRFA 216
             SD          TPL   A
Sbjct: 201 YMSDA----NFDDWTPLSEVA 217

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  133 bits (336), Expect = 4e-38
 Identities = 56/226 (24%), Positives = 87/226 (38%), Gaps = 30/226 (13%)

Query: 23  GIGRCIVEKLSQHEAIIIAL---------SKTQANLDSLKQAFPNVQ-------TVQVDL 66
           G GR    +L+   A IIA+             A  + L      V+         Q D+
Sbjct: 24  GQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADV 83

Query: 67  QDWARTRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQ 122
           +D     AA+       G +D+++ NA +A     +   ++     + DVN+  V +  +
Sbjct: 84  RDRESLSAALQAGLDELGRLDIVVANAGIAP----MSAGDDGW-HDVIDVNLTGVYHTIK 138

Query: 123 VVSKTMIDHKIQGSIVNVSSIAGKTALE----GHTIYSASKAALDSITRTMALELGPYNI 178
           V   T++     GSIV +SS AG   +     G   Y A+K  +  + R  A  L    I
Sbjct: 139 VAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMI 198

Query: 179 RVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPW 224
           RVNS+ P+ V T M    ++    A    A    G   G   P   
Sbjct: 199 RVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAM-GNAMPVEV 243

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  132 bits (334), Expect = 4e-38
 Identities = 37/203 (18%), Positives = 73/203 (35%), Gaps = 13/203 (6%)

Query: 22  PGIGRCIVEKLSQHEAIIIALSKTQANLDSL----KQAFPNVQTVQVDLQDWARTRAAVS 77
             IG  I +K +     + A  +    L  L    + A   +    +D ++     A ++
Sbjct: 17  DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLN 76

Query: 78  KV---GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                 P++V I N         L+  +      ++++   A     +  ++ M+ H  Q
Sbjct: 77  AADAHAPLEVTIFNVGANVNFPILETTDRVF-RKVWEMACWAGFVSGRESARLMLAHG-Q 134

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRV-NSVQPTVVMTQMG 193
           G I    + A      G   ++++K  L ++ ++MA EL P NI V + +  + V T   
Sbjct: 135 GKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWV 194

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
           R       +     A        
Sbjct: 195 R---ERREQMFGKDALANPDLLM 214

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  132 bits (335), Expect = 4e-38
 Identities = 46/213 (21%), Positives = 94/213 (44%), Gaps = 21/213 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPN--VQTVQVDLQDWARTRAAV 76
           GIG+ I   L    A ++   + + N++     ++  +P+  +Q V  DL      +  +
Sbjct: 21  GIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI 80

Query: 77  SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
            K   VD+LINN  +     + DI +E+    +F+VNI + + +++   K MI+ K +G 
Sbjct: 81  EKYPKVDILINNLGIFEPVEYFDIPDEDW-FKLFEVNIMSGVRLTRSYLKKMIERK-EGR 138

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM---- 192
           ++ ++S A     +    YSA+K    S++R++A      N+ VN++ P   +T+     
Sbjct: 139 VIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETM 198

Query: 193 -----GRTGWSDPAKAGPMLAK----TPLGRFA 216
                     +        + +    + + R  
Sbjct: 199 LNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLI 231

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  132 bits (335), Expect = 6e-38
 Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 17/208 (8%)

Query: 23  GIGRCIVEKLSQHEA-IIIA---LSKTQANLDSLKQAFPNVQTVQVDL---QDWART-RA 74
           GIG    +   ++ A ++IA       Q   +++      +  V  D+   +D       
Sbjct: 27  GIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDT 85

Query: 75  AVSKVGPVDVLINNAAVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            ++K G +D++  N  V        L+   E+    + D+N+     +++  ++ MI  K
Sbjct: 86  TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDF-KRVMDINVYGAFLVAKHAARVMIPAK 144

Query: 133 IQGSIVNVSSIAGKTALEGHTI-YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
            +GSIV  +SI+  TA EG +  Y+A+K A+  +T ++  ELG Y IRVN V P +V + 
Sbjct: 145 -KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASP 203

Query: 192 MGRTGWSDPAKAGPMLAK---TPLGRFA 216
           +    +   +     LA       G   
Sbjct: 204 LLTDVFGVDSSRVEELAHQAANLKGTLL 231

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  131 bits (333), Expect = 7e-38
 Identities = 58/203 (28%), Positives = 86/203 (42%), Gaps = 14/203 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL-----KQAFPNVQTVQVDLQDWARTRAAVS 77
           GIGR I    ++  A +    ++ A++D+      +     V  VQ D+ D A+  A   
Sbjct: 21  GIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAG 80

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +     G +DV+  NA V        +  E L + IF VN+       Q     +I    
Sbjct: 81  RAVEEFGGIDVVCANAGVFPDAPLATMTPEQL-NGIFAVNVNGTFYAVQACLDALIASG- 138

Query: 134 QGSIVNVSSIAGK-TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            G +V  SSI G  T   G + Y A+KAA     RT A+EL P+ I VN++ P  +MT+ 
Sbjct: 139 SGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEG 198

Query: 193 GRTGWSDPAKAGPMLAKTPLGRF 215
                 +   A  M    P G  
Sbjct: 199 LL-ENGEEYIAS-MARSIPAGAL 219

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  132 bits (334), Expect = 7e-38
 Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 18/216 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIGR     L+     + AL +T+  ++     +  A      ++ D+ D  + R AV  
Sbjct: 39  GIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRD 98

Query: 79  V----GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +    G +D+++ NA +   +    D+      D    VN++       +    +     
Sbjct: 99  LVLKFGHLDIVVANAGINGVWAPIDDLKPFE-WDETIAVNLRGTFLTLHLTVPYLKQRG- 156

Query: 134 QGSIVNVSSIAGKT--ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
            G+IV VSSI G       G T Y+A+KAA  +I + +ALELG ++IRVN+V P  + T 
Sbjct: 157 GGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETN 216

Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRW 227
           +         +   +  + P G+      P    + 
Sbjct: 217 ISDNTKLRHEEETAIPVEWPKGQ-----VPITDGQP 247

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  131 bits (333), Expect = 8e-38
 Identities = 40/212 (18%), Positives = 94/212 (44%), Gaps = 20/212 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP------NVQTVQVDLQDWARTRAAV 76
           G+G     +L+++ A ++  S+ +  L++             V  V  D+++        
Sbjct: 18  GLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLF 77

Query: 77  SKV---GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            K    G  D+L+ +    R  RF+++  E+  D  + +  ++ + + +  ++ M++   
Sbjct: 78  EKARDLGGADILVYSTGGPRPGRFMELGVEDW-DESYRLLARSAVWVGRRAAEQMVEKG- 135

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM- 192
            G +V + S+      +   + +  +  +  + RT+ALEL P+ + VN+V P++++T   
Sbjct: 136 WGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRV 195

Query: 193 --------GRTGWSDPAKAGPMLAKTPLGRFA 216
                    R+G +       M ++ P+GR  
Sbjct: 196 RSLAEERARRSGITVEEALKSMASRIPMGRVG 227

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  131 bits (332), Expect = 1e-37
 Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 8/172 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG  I  + S+    ++ L++    L +L     N    QVD+ D      A+++    
Sbjct: 27  GIGEAIARRFSEEGHPLLLLARRVERLKALNLP--NTLCAQVDVTDKYTFDTAITRAEKI 84

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            GP D ++NNA +    +    +       +FDVN+  ++N  Q V   M      G+I+
Sbjct: 85  YGPADAIVNNAGMMLLGQIDTQEANE-WQRMFDVNVLGLLNGMQAVLAPMKARN-CGTII 142

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
           N+SSIAGK     H  Y  +K A+ +I+  +  E+   N+RV ++ P+ V T
Sbjct: 143 NISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKT 194

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  128 bits (325), Expect = 3e-37
 Identities = 36/189 (19%), Positives = 68/189 (35%), Gaps = 14/189 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           G+G      L  H+ ++    +    L  L +     + +  DL D    +A + + GP+
Sbjct: 11  GLGGAFARALKGHDLLLSG--RRAGALAELAREVG-ARALPADLADELEAKALLEEAGPL 67

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L++    A      +   + L++ +   ++         V K     K     V   +
Sbjct: 68  DLLVHAVGKAGRASVREAGRD-LVEEMLAAHLLTAAF----VLKHARFQK-GARAVFFGA 121

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
                 + G   Y+A+K AL++       EL    + +  V+   V      TG   P  
Sbjct: 122 YPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAV-----ATGLWAPLG 176

Query: 203 AGPMLAKTP 211
             P  A +P
Sbjct: 177 GPPKGALSP 185

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  130 bits (329), Expect = 3e-37
 Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 12/198 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           GIGR  ++  ++  A ++A+ + +  L     A       V  D+ D     A  ++   
Sbjct: 17  GIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALE 76

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G +  + + A VA      ++  E   + +  VN+     +++   + +   +  GS+
Sbjct: 77  EFGRLHGVAHFAGVAHSALSWNLPLEAW-EKVLRVNLTGSFLVARKAGEVL---EEGGSL 132

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           V   S+AG  A  G   Y+A K  +  + RT+ALEL    +RVN + P ++ T M  T  
Sbjct: 133 VLTGSVAGLGAF-GLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPM--TAG 189

Query: 198 SDPAKAGPMLAKTPLGRF 215
             P      +  +PLGR 
Sbjct: 190 LPPWAWEQEVGASPLGRA 207

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  131 bits (331), Expect = 5e-37
 Identities = 46/198 (23%), Positives = 83/198 (41%), Gaps = 18/198 (9%)

Query: 23  GIGRCIVEKLSQHEAIII-------ALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAA 75
           G+G  +V +L      +        ++ K  A L   + + P V  VQ+D+      + A
Sbjct: 19  GVGIGLVRQLLNQGCKVAIADIRQDSIDKALATL-EAEGSGPEVMGVQLDVASREGFKMA 77

Query: 76  VSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
             +V    GPV +L NNA V  F    +   ++  D +  VN+  V+N        M++ 
Sbjct: 78  ADEVEARFGPVSILCNNAGVNLFQPIEESSYDD-WDWLLGVNLHGVVNGVTTFVPRMVER 136

Query: 132 KIQ-----GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 186
                   G +VN +S+A   A     IY+ +K A+  ++ ++   L  Y I V+ + P 
Sbjct: 137 VKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPG 196

Query: 187 VVMTQMGRTGWSDPAKAG 204
           +V + +  +    P    
Sbjct: 197 LVKSYIYASDDIRPDALK 214

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  128 bits (325), Expect = 7e-37
 Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 10/193 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR + + LSQ  A +   ++ +  L      +     V  DL+          KV  V
Sbjct: 30  GIGRAVADVLSQEGAEVTICARNEELLKRSGHRY-----VVCDLRKDLD--LLFEKVKEV 82

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+ NA   +   F ++  E+      D     +I I +     M +    G IV ++S
Sbjct: 83  DILVLNAGGPKAGFFDELTNED-FKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITS 140

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            +  + +E     ++++ AL    +T++ E+ PY I VN V P    T+  +   S+  K
Sbjct: 141 FSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKK 200

Query: 203 AGPMLAKTPLGRF 215
              + ++ P+ R 
Sbjct: 201 KQ-VESQIPMRRM 212

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  129 bits (326), Expect = 7e-37
 Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 19/209 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----------PNVQTVQVDLQDWAR 71
           GIGR +  +L+   A + A    +A      +              N    Q D+ +   
Sbjct: 18  GIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARA 77

Query: 72  TRAAVSKV-----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSK 126
            R  + +V      P  V+++ A + + +  L + E++  D +  VN+K    ++Q  ++
Sbjct: 78  ARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDW-DKVIAVNLKGTFLVTQAAAQ 136

Query: 127 TMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 186
            ++ +  +GSI+N+SSI GK    G T Y+ASKA +  +T+T A ELG + IR NSV P 
Sbjct: 137 ALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPG 196

Query: 187 VVMTQMGRTGWSDPAKAGPMLAKTPLGRF 215
            + T M +           +    P+G  
Sbjct: 197 FIATPMTQK-VPQKVVDK-ITEMIPMGHL 223

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  128 bits (325), Expect = 8e-37
 Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 17/209 (8%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV- 79
           GIG  I + L++  A  ++         L  + +          DL D A+  A  +   
Sbjct: 15  GIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAE 74

Query: 80  ---GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
              G VD+L+NNA +           E+  D I  +N+ AV + +++    M      G 
Sbjct: 75  REFGGVDILVNNAGIQHVAPVEQFPLESW-DKIIALNLSAVFHGTRLALPGMRARN-WGR 132

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM---- 192
           I+N++S+ G     G   Y A+K  +  +T+ + LE    N+  N++ P  V+T +    
Sbjct: 133 IINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQ 192

Query: 193 -----GRTGWSDPAKAGPMLAKTPLGRFA 216
                   G    A+   +  K P   F 
Sbjct: 193 IDDRAANGGDPLQAQHDLLAEKQPSLAFV 221

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  129 bits (326), Expect = 9e-37
 Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 13/181 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIGR    + ++ ++ ++     +  L+      K     V T  VD  +     ++  K
Sbjct: 42  GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKK 101

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           V    G V +L+NNA V          +   I+  F+VN+ A    ++     M  +   
Sbjct: 102 VKAEIGDVSILVNNAGVVYTSDLFATQDP-QIEKTFEVNVLAHFWTTKAFLPAMTKNN-H 159

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPY---NIRVNSVQPTVVMTQ 191
           G IV V+S AG  ++     Y +SK A     +T+  EL       ++   + P  V T 
Sbjct: 160 GHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG 219

Query: 192 M 192
            
Sbjct: 220 F 220

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  128 bits (325), Expect = 2e-36
 Identities = 37/210 (17%), Positives = 71/210 (33%), Gaps = 26/210 (12%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQ-----------TVQVDLQDWAR 71
           GIG  I ++++   A +  ++K+      L                    +  D++D   
Sbjct: 20  GIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDA 79

Query: 72  TRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT 127
             AAV+K     G +D+ +NNA+        ++  +   D +  + ++    +SQ     
Sbjct: 80  VAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKR-FDLMNGIQVRGTYAVSQSCIPH 138

Query: 128 MIDHKIQGSIVNVSSIAGKTA-LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 186
           M        I+ +S            T Y  +K  +      +A EL    I  N++ P 
Sbjct: 139 MKGRD-NPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWP- 196

Query: 187 VVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 216
                  RT  +  A    +     + R  
Sbjct: 197 -------RTTVATAAVQNLLGGDEAMARSR 219

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  128 bits (324), Expect = 2e-36
 Identities = 46/205 (22%), Positives = 85/205 (41%), Gaps = 15/205 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVSK 78
           GIG  + E  +Q  A +     +    +  +        + +  + ++ D       +S+
Sbjct: 45  GIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQ 104

Query: 79  V----GPVDVLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                G +DV + NA V       +D+D  +  + I  V++  V   S  + K    +  
Sbjct: 105 QEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG- 163

Query: 134 QGSIVNVSSIAGKTALEGH--TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
           +GS++  SSI+GK          Y+ +KAA   + +++A+E  P+  RVN++ P  + T 
Sbjct: 164 KGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPF-ARVNTISPGYIDTD 222

Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFA 216
           +      D          TPLGR  
Sbjct: 223 ITDFASKDMKAK--WWQLTPLGREG 245

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  128 bits (324), Expect = 3e-36
 Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 21/212 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVSK 78
           GIG  +   L+     +   ++   N+ +          +V     D+       AAV+ 
Sbjct: 35  GIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAA 94

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT--MIDHK 132
                GP+ +L+N+A         D+D+  L   + D N+  V  +++ V +   M +  
Sbjct: 95  AVERFGPIGILVNSAGRNGGGETADLDDA-LWADVLDTNLTGVFRVTREVLRAGGMREAG 153

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G IVN++S  GK  +     Y+ASK  +   T+++  EL    I VN+V P  V T M
Sbjct: 154 -WGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPM 212

Query: 193 GRTGWSDPAKAGP---------MLAKTPLGRF 215
                   A+              AK PLGR+
Sbjct: 213 AERVREGYARHWGVTEQEVHERFNAKIPLGRY 244

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  126 bits (320), Expect = 5e-36
 Identities = 40/176 (22%), Positives = 80/176 (45%), Gaps = 11/176 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVSK 78
           GIG      L+   A +   ++    L +L          V  +++D+ D     AAV+ 
Sbjct: 18  GIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVAS 77

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                G +D+L+NNA +       D D  +    + D N+  ++ +++     ++  K  
Sbjct: 78  TVEALGGLDILVNNAGIMLLGPVEDADTTD-WTRMIDTNLLGLMYMTRAALPHLLRSK-- 134

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
           G++V +SSIAG+  +    +Y A+K  +++ + T+  E+    +RV  ++P    T
Sbjct: 135 GTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDT 190

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  127 bits (321), Expect = 5e-36
 Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 21/212 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN----VQTVQVDLQDWARTRAAVSK 78
           GIG  I  +L +    +   ++ +  L +  +              D++      A V+ 
Sbjct: 33  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA 92

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT--MIDHK 132
           V    GPVDVL+NNA         ++ +E L   + + N+  V  +++ V K   M++  
Sbjct: 93  VVERYGPVDVLVNNAGRPGGGATAELADE-LWLDVVETNLTGVFRVTKQVLKAGGMLERG 151

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV---M 189
             G IVN++S  GK  +     YSASK  +   T+ + LEL    I VN+V P  V   M
Sbjct: 152 -TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPM 210

Query: 190 TQMGRTGWSDPAKAGP------MLAKTPLGRF 215
               R  +SD  +         + A+ P+GR+
Sbjct: 211 AASVREHYSDIWEVSTEEAFDRITARVPIGRY 242

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  126 bits (319), Expect = 6e-36
 Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 5/194 (2%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKVGP 81
           GIG  I   L +  + +I     +  L SL  A   N      +L +       +SK   
Sbjct: 25  GIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSN 84

Query: 82  VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS 141
           +D+L+ NA +      + + +++  D + D+N+KA   +++   K MI  +  G I+N+S
Sbjct: 85  LDILVCNAGITSDTLAIRMKDQD-FDKVIDINLKANFILNREAIKKMIQKR-YGRIINIS 142

Query: 142 SIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPA 201
           SI G     G   Y ASKA L  +T++++ E+    I VN+V P  + + M     ++  
Sbjct: 143 SIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTD-KLNEKQ 201

Query: 202 KAGPMLAKTPLGRF 215
           +   ++ K PLG +
Sbjct: 202 REA-IVQKIPLGTY 214

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  126 bits (319), Expect = 8e-36
 Identities = 47/210 (22%), Positives = 79/210 (37%), Gaps = 19/210 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN----VQTVQVDLQDWARTRAAVSK 78
           GIGR I  +L +  A +    +    L  + Q   +       V  D    +  R+   +
Sbjct: 16  GIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQ 75

Query: 79  V-----GPVDVLINNAAVA-------RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSK 126
           V     G +DVL+NNA          R   F +       D I +V ++     S   ++
Sbjct: 76  VDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMW-DDINNVGLRGHYFCSVYGAR 134

Query: 127 TMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 186
            M+    QG IV +SS      +  +  Y   KAA D +    A EL  + +   S+ P 
Sbjct: 135 LMVPAG-QGLIVVISSPGSLQYM-FNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPG 192

Query: 187 VVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 216
           +V T++ +   +        + K     F+
Sbjct: 193 IVQTELLKEHMAKEEVLQDPVLKQFKSAFS 222

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  125 bits (317), Expect = 8e-36
 Identities = 38/195 (19%), Positives = 77/195 (39%), Gaps = 14/195 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----NVQTVQVDLQDWARTRAAVS 77
           GIG  I   L++    +   +++   L+ +           V    +D+           
Sbjct: 13  GIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSK 72

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           KV    G VDV++ NA +  F R  ++ EE     + +VN+  V    +    ++     
Sbjct: 73  KVLERFGDVDVVVANAGLGYFKRLEELSEEE-FHEMIEVNLLGVWRTLKAFLDSLKRTG- 130

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
             ++V  S ++ +  +     Y ++K A  ++ RT  +E    ++R   ++P  V T  G
Sbjct: 131 GLALVTTSDVSAR-LIPYGGGYVSTKWAARALVRTFQIE--NPDVRFFELRPGAVDTYFG 187

Query: 194 RTGWSDPAKAGPMLA 208
            +    P + G +  
Sbjct: 188 GSKPGKPKEKGYLKP 202

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  126 bits (320), Expect = 8e-36
 Identities = 41/211 (19%), Positives = 78/211 (36%), Gaps = 31/211 (14%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQ-----------TVQVDLQDWAR 71
           GIG  I  + ++  A +   +K+      L     +              ++ D+++  +
Sbjct: 17  GIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQ 76

Query: 72  TRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT 127
            RAAV+      G +D+L+NNA+       LD   +   D +  VN +     +Q     
Sbjct: 77  VRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKR-FDLMQQVNARGSFVCAQACLPH 135

Query: 128 MIDHKIQGSIVNVSSIAGKTA--LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
           ++       I+ ++            HT Y+ +K  +  +T  +A E GP  + +N++ P
Sbjct: 136 LLQAP-NPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWP 194

Query: 186 -TVVMTQMGRTGWSDPAKAGPMLAKTPLGRF 215
            TV+ T               ML        
Sbjct: 195 RTVIATDAIN-----------MLPGVDAAAC 214

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  126 bits (320), Expect = 1e-35
 Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 14/203 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL-----KQAFPNVQTVQVDLQDWARTRAAVS 77
           GIGR I    ++  A +   +++   L S+     +    NV  V++D+ D      A  
Sbjct: 52  GIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAAR 111

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            V    G +DV+  NA +    R   +  E  +  + DVN+K  +   Q     +     
Sbjct: 112 TVVDAFGALDVVCANAGIFPEARLDTMTPEQ-LSEVLDVNVKGTVYTVQACLAPLTASG- 169

Query: 134 QGSIVNVSSIAGK-TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
           +G ++  SSI G  T   G + Y ASKAA     RT A+EL P  + VN++ P  ++T+ 
Sbjct: 170 RGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEG 229

Query: 193 GRTGWSDPAKAGPMLAKTPLGRF 215
                 +   +G M    P+G  
Sbjct: 230 LV-DMGEEYISG-MARSIPMGML 250

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  126 bits (320), Expect = 1e-35
 Identities = 50/214 (23%), Positives = 85/214 (39%), Gaps = 22/214 (10%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAV 76
           GIG  I   L++  A I++        + ++           V     D+   +     +
Sbjct: 36  GIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMM 95

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           + V    G  D+L+NNA V   ++  D   E   D I  VN+ +  +  +     M    
Sbjct: 96  AMVADRFGGADILVNNAGVQFVEKIEDFPVEQW-DRIIAVNLSSSFHTIRGAIPPMKKKG 154

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G I+N++S  G  A    + Y A+K  +  +T+T+ALE+    + VNS+ P  V+T +
Sbjct: 155 -WGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPL 213

Query: 193 GRTGWSDPAKAGP----------MLAKTPLGRFA 216
                 D A+             ML   P  +F 
Sbjct: 214 VEKQIPDQARTRGITEEQVINEVMLKGQPTKKFI 247

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  125 bits (317), Expect = 1e-35
 Identities = 43/174 (24%), Positives = 82/174 (47%), Gaps = 8/174 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV-- 79
           G G CI  +  Q    +IA  + Q  L  LK     N+   Q+D+++ A     ++ +  
Sbjct: 11  GFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPA 70

Query: 80  --GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
               +D+L+NNA +A   +       E+  +++ D N K ++ +++ V   M++    G 
Sbjct: 71  EWCNIDILVNNAGLALGMEPAHKASVED-WETMIDTNNKGLVYMTRAVLPGMVERN-HGH 128

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
           I+N+ S AG     G  +Y A+KA +   +  +  +L    +RV  ++P +V  
Sbjct: 129 IINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG 182

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  125 bits (317), Expect = 2e-35
 Identities = 41/206 (19%), Positives = 81/206 (39%), Gaps = 17/206 (8%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKT---QANLDSLKQAFP-NVQTVQVDLQDWARTRAAV 76
           G+G       ++  A   I   S+    + N+  L++ +    +  +  +  +      V
Sbjct: 33  GMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLV 92

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
             V    G +D  I NA        LD   E   + +  V++    + ++ V     +  
Sbjct: 93  KDVVADFGQIDAFIANAGATADSGILDGSVEA-WNHVVQVDLNGTFHCAKAVGHHFKERG 151

Query: 133 IQGSIVNVSSIAGKTA--LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
             GS+V  +S++G  A   +  T Y+ +KA    + R++A E   +  RVNS+ P  + T
Sbjct: 152 -TGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDT 209

Query: 191 QMGRTGWSDPAKAGPMLAKTPLGRFA 216
            +  + +          +  P+GR  
Sbjct: 210 GL--SDFVPKETQQLWHSMIPMGRDG 233

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  126 bits (318), Expect = 2e-35
 Identities = 41/195 (21%), Positives = 75/195 (38%), Gaps = 14/195 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVS 77
           GIGR +   L++  A ++  ++++  L  +          +   +   ++D       V+
Sbjct: 39  GIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVA 98

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +     G +D+LI N            D  ++     +VN  + + ++      M+    
Sbjct: 99  QAGKLMGGLDMLILNHITNTSLNLFHDDIHHV-RKSMEVNFLSYVVLTVAALP-MLKQS- 155

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP--YNIRVNSVQPTVVMTQ 191
            GSIV VSS+AGK A      YSASK ALD    ++  E      N+ +      ++ T+
Sbjct: 156 NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 215

Query: 192 MGRTGWSDPAKAGPM 206
                 S        
Sbjct: 216 TAMKAVSGIVHMQAA 230

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  125 bits (316), Expect = 3e-35
 Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 9/176 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ---AFPNVQTVQVDLQDWARTRAAVSKV 79
           G G     + ++    ++   + +  L +L     A   V  + +D++D A   AAV  +
Sbjct: 32  GFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNL 91

Query: 80  ----GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                 +  LINNA +A   D     D ++  D++ D NIK ++  ++++   +I H   
Sbjct: 92  PEEFATLRGLINNAGLALGTDPAQSCDLDD-WDTMVDTNIKGLLYSTRLLLPRLIAHGAG 150

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            SIVN+ S+AGK    G  +Y  +KA ++  +  +  +L    +RV +++P +  +
Sbjct: 151 ASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCES 206

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  125 bits (316), Expect = 5e-35
 Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 9/161 (5%)

Query: 61  TVQVDLQDWARTRAAVSKV----GPVDVLINNAAV-ARFDRFLDIDEENLIDSIFDVNIK 115
            +  DL D +  R+ V K     G +D+L   A          D+  E      F VN+ 
Sbjct: 104 LLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQF-QQTFAVNVF 162

Query: 116 AVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP 175
           A+  I+Q     +       SI+  SSI           Y+A+KAA+ + +R +A ++  
Sbjct: 163 ALFWITQEAIPLL---PKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAE 219

Query: 176 YNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 216
             IRVN V P  + T +  +G     K      +TP+ R  
Sbjct: 220 KGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAG 260

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  125 bits (315), Expect = 5e-35
 Identities = 51/205 (24%), Positives = 88/205 (42%), Gaps = 17/205 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP------NVQTVQVDLQDWARTRAAV 76
           GIG  +   L Q    ++  ++T  N++ L            +   + DL +     +  
Sbjct: 43  GIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMF 102

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           S +      VD+ INNA +AR D  L          +F+VN+ A+   ++   ++M +  
Sbjct: 103 SAIRSQHSGVDICINNAGLARPDTLLSGSTSG-WKDMFNVNVLALSICTREAYQSMKERN 161

Query: 133 IQ-GSIVNVSSIAGKTALE--GHTIYSASKAALDSITRTMALELGP--YNIRVNSVQPTV 187
           +  G I+N++S++G   L       YSA+K A+ ++T  +  EL     +IR   + P V
Sbjct: 162 VDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGV 221

Query: 188 VMTQMGRTGWS-DPAKAGPMLAKTP 211
           V TQ        DP KA     +  
Sbjct: 222 VETQFAFKLHDKDPEKAAATYEQMK 246

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  124 bits (313), Expect = 6e-35
 Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 25/206 (12%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA-------FPNVQTVQVDLQDWARTRAA 75
           GIGR      +++ A +I L + +  L  +           P    + +        +  
Sbjct: 23  GIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQL 82

Query: 76  VSKV----GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
             ++      +D +++NA +        + + +     +  VN+ A   ++Q +   ++ 
Sbjct: 83  AQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVW-QDVMQVNVNATFMLTQALLPLLLK 141

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
               GS+V  SS  G+        Y+ASK A + + + +A E     +RVN + P    T
Sbjct: 142 SD-AGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RLRVNCINPGGTRT 199

Query: 191 QMGRTGWSDPAKAGPMLAKTPLGRFA 216
            M  +                  +  
Sbjct: 200 AMRAS----------AFPTEDPQKLK 215

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  123 bits (311), Expect = 7e-35
 Identities = 25/180 (13%), Positives = 56/180 (31%), Gaps = 7/180 (3%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
            +G   V+        + ++   +    S         +              +     V
Sbjct: 18  ALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKV 77

Query: 83  DVLINNAAV-ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS 141
           D ++  A   A  +       +N  D ++  +I      S + +K + +    G +    
Sbjct: 78  DAILCVAGGWAGGNAKSKSLFKNC-DLMWKQSIWTSTISSHLATKHLKEG---GLLTLAG 133

Query: 142 SIAGKTALEGHTIYSASKAALDSITRTMALELG--PYNIRVNSVQPTVVMTQMGRTGWSD 199
           + A      G   Y  +K A+  + +++A +    P      +V P  + T M R    +
Sbjct: 134 AKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE 193

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  123 bits (312), Expect = 7e-35
 Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 10/197 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIGR  +E  ++  A ++A    +  L    +A      V +D+ D A      ++    
Sbjct: 16  GIGRATLELFAKEGARLVACDIEEGPLREAAEAV-GAHPVVMDVADPASVERGFAEALAH 74

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            G +D +++ A + R +    +  E+  + +  VN+     +++  S+ M +    GSIV
Sbjct: 75  LGRLDGVVHYAGITRDNFHWKMPLEDW-ELVLRVNLTGSFLVAKAASEAMREKN-PGSIV 132

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS 198
             +S        G   Y+AS A +  +TRT+ALELG + IRVN++ P  + T+M      
Sbjct: 133 LTASRVY-LGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VP 190

Query: 199 DPAKAGPMLAKTPLGRF 215
           +  +    +A TPLGR 
Sbjct: 191 EKVREK-AIAATPLGRA 206

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  123 bits (312), Expect = 8e-35
 Identities = 53/198 (26%), Positives = 101/198 (51%), Gaps = 9/198 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           GIG+ I E L++  A +I  + +++   ++      N + + +++ +     A +  +  
Sbjct: 20  GIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITD 79

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G VD+L+NNA + R +  + + EE     I + N+ ++  +S+ V + M+  + QG I
Sbjct: 80  EFGGVDILVNNAGITRDNLLMRMKEEE-WSDIMETNLTSIFRLSKAVLRGMMKKR-QGRI 137

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           +NV S+ G     G   Y+A+KA +   T++MA E+    + VN+V P  + T M +   
Sbjct: 138 INVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK-AL 196

Query: 198 SDPAKAGPMLAKTPLGRF 215
           +D  +    LA+ P GR 
Sbjct: 197 NDEQRTA-TLAQVPAGRL 213

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  123 bits (311), Expect = 1e-34
 Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 9/198 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           GIG  I        AI+      +  L  +      +V     +L D    +        
Sbjct: 38  GIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAER 97

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
               +D+L+NNA + R   F+ + +++  D +  VN+ A   +++ +  +M+  +  G I
Sbjct: 98  EMEGIDILVNNAGITRDGLFVRMQDQD-WDDVLAVNLTAASTLTRELIHSMMRRR-YGRI 155

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           +N++SI G     G T Y A+KA L   ++ +A E+   NI VN + P  + + M     
Sbjct: 156 INITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTD-KL 214

Query: 198 SDPAKAGPMLAKTPLGRF 215
           ++  K   ++A  P+ R 
Sbjct: 215 NEKQKEA-IMAMIPMKRM 231

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  123 bits (311), Expect = 2e-34
 Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 12/201 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVSK 78
           GIGR I + L++  + +I +S+TQ + DS+                D+         ++K
Sbjct: 55  GIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK 114

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           +      VD+L+NNA + R + FL +  +   + +   N+ ++  I+Q +SK MI+++  
Sbjct: 115 ILTEHKNVDILVNNAGITRDNLFLRMKNDE-WEDVLRTNLNSLFYITQPISKRMINNR-Y 172

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G I+N+SSI G T   G   YS+SKA +   T+++A EL   NI VN++ P  + + M  
Sbjct: 173 GRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD 232

Query: 195 TGWSDPAKAGPMLAKTPLGRF 215
              S+  K   +++  P GR 
Sbjct: 233 -KISEQIKKN-IISNIPAGRM 251

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  122 bits (309), Expect = 3e-34
 Identities = 50/213 (23%), Positives = 79/213 (37%), Gaps = 22/213 (10%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAV 76
           GIG  I   L+   A I++      A ++ ++          V     DL      R  V
Sbjct: 15  GIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLV 74

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
                  G +D+L+NNA +       D   E   D+I  +N+ AV + +      M    
Sbjct: 75  DNAVRQMGRIDILVNNAGIQHTALIEDFPTEKW-DAILALNLSAVFHGTAAALPHMKKQG 133

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G I+N++S  G  A    + Y A+K  +   T+  ALE     I  N++ P  V T +
Sbjct: 134 -FGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL 192

Query: 193 GRTGWSDPAKAGP----------MLAKTPLGRF 215
                S  A+             +  K P  +F
Sbjct: 193 VEKQISALAEKNGVDQETAARELLSEKQPSLQF 225

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  122 bits (308), Expect = 4e-34
 Identities = 58/201 (28%), Positives = 102/201 (50%), Gaps = 12/201 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVSK 78
           GIGR I  +L++  A++I  + T+A  + +  AF       +   +++ D     A V  
Sbjct: 39  GIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVES 98

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                G ++VL+NNA + +    + + ++   D++ D N+KAV  +S+ V + M+  +  
Sbjct: 99  TLKEFGALNVLVNNAGITQDQLAMRMKDDE-WDAVIDTNLKAVFRLSRAVLRPMMKAR-G 156

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G IVN++S+ G     G   Y+A+KA +  +TR +A E+G   I VN V P  + T M +
Sbjct: 157 GRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTK 216

Query: 195 TGWSDPAKAGPMLAKTPLGRF 215
            G     +   +  + PLGR 
Sbjct: 217 -GLPQEQQTA-LKTQIPLGRL 235

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  121 bits (307), Expect = 4e-34
 Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 13/202 (6%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG  I ++L +    ++     +  +    L+  K    +    + ++ DW  T+ A  
Sbjct: 24  GIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFD 83

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           KV    G +DVL+NNA + R   F  +  E+   ++ D N+ ++ N+++ V   M++   
Sbjct: 84  KVKAEVGEIDVLVNNAGITRDVVFRKMTRED-WQAVIDTNLTSLFNVTKQVIDGMVERG- 141

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N+SS+ G+    G T YS +KA +   T ++A E+    + VN+V P  + T M 
Sbjct: 142 WGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMV 201

Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
           +           ++A  P+ R 
Sbjct: 202 K-AIRPDVLEK-IVATIPVRRL 221

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  121 bits (307), Expect = 5e-34
 Identities = 51/200 (25%), Positives = 83/200 (41%), Gaps = 15/200 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSK 78
           GIG  I  +L    A I+  ++ QA ++++      A        +D+ D     A    
Sbjct: 15  GIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQA 74

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
                G +DVL+NNA V        +  +   + + DVNIK V+     V   M   +  
Sbjct: 75  AVDTWGRIDVLVNNAGVMPLSPLAAVKVDE-WERMIDVNIKGVLWGIGAVLPIMEAQR-S 132

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG- 193
           G I+N+ SI   + +    +Y A+K A+ +I+  +  E    NIRV  V P VV +++  
Sbjct: 133 GQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCVNPGVVESELAG 190

Query: 194 -RTGWSDPAKAGPMLAKTPL 212
             T   +   A        L
Sbjct: 191 TITH-EETMAAMDTYRAIAL 209

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  121 bits (306), Expect = 6e-34
 Identities = 44/201 (21%), Positives = 97/201 (48%), Gaps = 12/201 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK 78
           GIG  +   L+   A ++  + +QA+ +  + +        + + +++ D    +   ++
Sbjct: 16  GIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAE 75

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           +      +D+L+NNA + R +  + + E+    S+ + N+ ++  +S+   + M+  +  
Sbjct: 76  IKAENLAIDILVNNAGITRDNLMMRMSEDE-WQSVINTNLSSIFRMSKECVRGMMKKR-W 133

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G I+++ S+ G     G T Y A+KA +   ++++A E+   NI VN V P  + T M  
Sbjct: 134 GRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTD 193

Query: 195 TGWSDPAKAGPMLAKTPLGRF 215
              +D  K+  +  K P G+ 
Sbjct: 194 -KLTDEQKSF-IATKIPSGQI 212

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  121 bits (306), Expect = 9e-34
 Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 12/202 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIA-----LSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           G+G  I  +L      +              L   + A  + +   VD+ D+        
Sbjct: 36  GLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAE 95

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           KV    G VDVLINNA + R   F+ + + +  D++   ++ A+ N+++     M++ + 
Sbjct: 96  KVLADFGKVDVLINNAGITRDATFMKMTKGDW-DAVMRTDLDAMFNVTKQFIAGMVERR- 153

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN+ S+ G     G   Y+++KA +   T+T+ALE     I VN+V P  + T M 
Sbjct: 154 FGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMV 213

Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
                       +L + P+GR 
Sbjct: 214 E-AVPQDVLEAKILPQIPVGRL 234

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  120 bits (303), Expect = 2e-33
 Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 13/202 (6%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           G+G+ I  KL    A I+   + + T  +   +  K A  NV   + D+++       V 
Sbjct: 16  GLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVK 75

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                 G +D+L+NNA + R    L + E++  D + + N+K+    ++ VSK M+  K 
Sbjct: 76  TAMDAFGRIDILVNNAGITRDTLMLKMSEKD-WDDVLNTNLKSAYLCTKAVSKIMLKQK- 133

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N++SIAG     G   Y+ASKA L   T+++A E     I  N+V P ++ T M 
Sbjct: 134 SGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMT 193

Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
                D  K    L   PL RF
Sbjct: 194 D-VLPDKVKEM-YLNNIPLKRF 213

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  120 bits (302), Expect = 2e-33
 Identities = 42/228 (18%), Positives = 69/228 (30%), Gaps = 56/228 (24%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG    + L      I+ +    A              V  DL      + A++ V   
Sbjct: 12  GIGAATRKVLEAAGHQIVGIDIRDA-------------EVIADLSTAEGRKQAIADVLAK 58

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
               +D L+  A +    + L         ++  VN      +       +     Q + 
Sbjct: 59  CSKGMDGLVLCAGLGPQTKVLG--------NVVSVNYFGATELMDAFLPALKKGH-QPAA 109

Query: 138 VNVSSIAGKTALE----------------------------GHTIYSASKAALDSITRTM 169
           V +SS+A                                  G+  Y+ SK AL    R  
Sbjct: 110 VVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKR 169

Query: 170 ALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAK-TPLGRFA 216
           A   G   +R+N++ P    T + + G  DP     +     P+GR A
Sbjct: 170 AAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRA 217

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  119 bits (300), Expect = 3e-33
 Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 13/202 (6%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVS 77
           GIGR I  +L++    + +  + ++   +++ +       +   +Q ++ D    +A + 
Sbjct: 15  GIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIK 74

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +V    G +DVL+NNA + R +  + + E+   D + D N+K V N  Q  +  M+  + 
Sbjct: 75  EVVSQFGSLDVLVNNAGITRDNLLMRMKEQE-WDDVIDTNLKGVFNCIQKATPQMLRQR- 132

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G+I+N+SS+ G     G   Y A+KA +  +T++ A EL    I VN+V P  +++ M 
Sbjct: 133 SGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMT 192

Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
               SD  K   ML + PL RF
Sbjct: 193 D-ALSDELKEQ-MLTQIPLARF 212

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  119 bits (302), Expect = 3e-33
 Identities = 48/206 (23%), Positives = 82/206 (39%), Gaps = 17/206 (8%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           G+G+ + EKL      +        T      ++ K     +Q VQ D+         V 
Sbjct: 18  GLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVE 77

Query: 78  KV----GPVDVLINNA--AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
           +     G +D LINNA   V    + +D +E+   + +   N+ AV ++ ++V   M   
Sbjct: 78  EAMSHFGKIDFLINNAGPYVFERKKLVDYEEDE-WNEMIQGNLTAVFHLLKLVVPVMRKQ 136

Query: 132 KIQGSIVNVS--SIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
              G I+N               + ++A+K  L S+T+T+A E   Y I  N V P  ++
Sbjct: 137 N-FGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDII 195

Query: 190 TQMGRTGWSDPAKAGPMLAKTPLGRF 215
            +M     +           TP+GR 
Sbjct: 196 GEM--KEATIQEARQLKEHNTPIGRS 219

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  119 bits (300), Expect = 4e-33
 Identities = 57/202 (28%), Positives = 98/202 (48%), Gaps = 13/202 (6%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVS 77
           GIGR I   L++  A +++  +  +   + +         +   V+ D+ +       V 
Sbjct: 15  GIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVK 74

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +     G VD+L+NNA V + +  + + EE   D++ + N+K V   ++ VS+ M+  + 
Sbjct: 75  QTVDVFGQVDILVNNAGVTKDNLLMRMKEEE-WDTVINTNLKGVFLCTKAVSRFMMRQR- 132

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN++S+ G T   G   Y A+KA +  +T+T A EL   NI VN++ P  + T M 
Sbjct: 133 HGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMT 192

Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
                +  KA  ML   P  +F
Sbjct: 193 D-VLDENIKAE-MLKLIPAAQF 212

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  118 bits (299), Expect = 6e-33
 Identities = 37/206 (17%), Positives = 68/206 (33%), Gaps = 14/206 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQT-VQVDLQDWARTR-------- 73
           GIG  + E L++    +I + + QA++++        +T V   L               
Sbjct: 12  GIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAG 71

Query: 74  -AAVSKVGPVDVLINNAAVARFDRFLDID-EENLIDSIFDVNIKAVINISQVVSKTMIDH 131
               +    + V +N   V+     L          +   V   A           +   
Sbjct: 72  VGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAM 131

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
              G       +A +   + H  Y+ SK A+  + R   ++     +R+N V P  V T 
Sbjct: 132 L-AGDEARAIELAEQQG-QTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETP 189

Query: 192 MGRTGWSDPAKAGPMLAK-TPLGRFA 216
           + +   +DP           PLGR +
Sbjct: 190 LLQASKADPRYGESTRRFVAPLGRGS 215

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  118 bits (299), Expect = 6e-33
 Identities = 48/202 (23%), Positives = 90/202 (44%), Gaps = 13/202 (6%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVS 77
           GIG+ I   L +    +++  +++    + + +          T   D+   A   A + 
Sbjct: 12  GIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMK 71

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                 G +DV++NNA + R    + + +    D + D+N+  V   +Q  +K M+  + 
Sbjct: 72  TAIDAWGTIDVVVNNAGITRDTLLIRMKKSQW-DEVIDLNLTGVFLCTQAATKIMMKKR- 129

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           +G I+N++S+ G     G   Y+A+KA +   ++T A E    NI VN V P  + + M 
Sbjct: 130 KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT 189

Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
                +  +   +L   PLGR 
Sbjct: 190 A-KLGEDMEKK-ILGTIPLGRT 209

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  118 bits (298), Expect = 1e-32
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 13/202 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN-----VQTVQVDLQDWARTRAAVS 77
           GIGR I EKL+   + +I    +     ++ +   N        V+++L        A  
Sbjct: 18  GIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFE 77

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           ++      +D+L+NNA + R   FL +   +  + +  VN+     ++Q   + MI  + 
Sbjct: 78  EIYNLVDGIDILVNNAGITRDKLFLRMSLLD-WEEVLKVNLTGTFLVTQNSLRKMIKQR- 135

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G IVN+SS+ G T   G   YS +KA L   T+++A EL P N+ VN+V P  + T M 
Sbjct: 136 WGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMT 195

Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
               S+  K      + PLGRF
Sbjct: 196 A-VLSEEIKQK-YKEQIPLGRF 215

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  118 bits (298), Expect = 2e-32
 Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 12/184 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV-- 79
           G GR I E        +I  ++    LD L  A+P   + + +D+ D  R     + V  
Sbjct: 16  GFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLA 75

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G VDVL+NNA   +   F +  E   +  +F++++     +++ +   M +    GS+
Sbjct: 76  RYGRVDVLVNNAGRTQVGAFEETTERE-LRDLFELHVFGPARLTRALLPQMRERG-SGSV 133

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           VN+SS  G+ +  G + YSA+KAAL+ ++  +A E+ P+ I+V  V+P        RT  
Sbjct: 134 VNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAF-----RTNL 188

Query: 198 SDPA 201
               
Sbjct: 189 FGKG 192

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  118 bits (297), Expect = 2e-32
 Identities = 54/182 (29%), Positives = 86/182 (47%), Gaps = 16/182 (8%)

Query: 23  GIGRCIVEKLSQH---EAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTR 73
           GIG+    +  +    +  +I  ++    L+ LK+          V   Q+D+    + +
Sbjct: 44  GIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIK 103

Query: 74  AAVSKV----GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTM 128
             +  +      +D+L+NNA  A   DR   I  E+ I  +FD N+ A+INI+Q V    
Sbjct: 104 PFIENLPQEFKDIDILVNNAGKALGSDRVGQIATED-IQDVFDTNVTALINITQAVLPIF 162

Query: 129 IDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
                 G IVN+ SIAG+ A    +IY ASK A+ + T ++  EL    IRV  + P +V
Sbjct: 163 QAKN-SGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLV 221

Query: 189 MT 190
            T
Sbjct: 222 ET 223

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  116 bits (293), Expect = 4e-32
 Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 14/203 (6%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPN-----VQTVQVDLQDWARTRAAV 76
           GIGR I  +L++    + I   + +   + + +         V  +  +L +     A V
Sbjct: 12  GIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALV 71

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            +     G +D L+NNA + R    + + +E+  +++ + N+ AV   ++   K M+  +
Sbjct: 72  HQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDW-EAVLEANLSAVFRTTREAVKLMMKAR 130

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G IVN++S+ G     G   Y ASKA L   TR +A E     I VN+V P  + T+M
Sbjct: 131 -FGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEM 189

Query: 193 GRTGWSDPAKAGPMLAKTPLGRF 215
                    K    L + P GRF
Sbjct: 190 TE-RLPQEVKEA-YLKQIPAGRF 210

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  116 bits (293), Expect = 5e-32
 Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 15/197 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG  I ++L+     +    +       L         V+VD+ D      A + V   
Sbjct: 26  GIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------GVEVDVTDSDAVDRAFTAVEEH 78

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            GPV+VL++NA ++     + + EE   + + + N+     ++Q  S++M  +K  G ++
Sbjct: 79  QGPVEVLVSNAGLSADAFLMRMTEEK-FEKVINANLTGAFRVAQRASRSMQRNK-FGRMI 136

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS 198
            + S++G   +     Y+ASKA +  + R++A EL   N+  N V P  + T M R    
Sbjct: 137 FIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-ALD 195

Query: 199 DPAKAGPMLAKTPLGRF 215
           +  + G  L   P  R 
Sbjct: 196 ERIQQG-ALQFIPAKRV 211

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  116 bits (292), Expect = 7e-32
 Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 15/197 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG  I    +     +    ++    +           V+ D+ D  +   A  ++   
Sbjct: 32  GIGLAIARAFADAGDKVAITYRSGEPPE-------GFLAVKCDITDTEQVEQAYKEIEET 84

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            GPV+VLI NA V +    + + EE+   S+ + N+     + +  ++ M+  K +G +V
Sbjct: 85  HGPVEVLIANAGVTKDQLLMRMSEED-FTSVVETNLTGTFRVVKRANRAMLRAK-KGRVV 142

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS 198
            +SS+ G     G   Y+ASKA L    R++A ELG  NI  N V P  V T M +   +
Sbjct: 143 LISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTK-VLT 201

Query: 199 DPAKAGPMLAKTPLGRF 215
           D  +A  ++++ PLGR+
Sbjct: 202 DEQRAN-IVSQVPLGRY 217

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  116 bits (292), Expect = 2e-31
 Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 16/163 (9%)

Query: 62  VQVDLQDWARTRAAVSKV----GPVDVLINNAAV-ARFDRFLDIDEENLIDSIFDVNIKA 116
           +  DL D    +  V +     G +++L+NN A          I  E L +  F +NI +
Sbjct: 102 LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQL-EKTFRINIFS 160

Query: 117 VINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTI---YSASKAALDSITRTMALEL 173
             ++++     +   K    I+N +SI    A EG+     YSA+K A+ + TR+++  L
Sbjct: 161 YFHVTKAALSHL---KQGDVIINTASI---VAYEGNETLIDYSATKGAIVAFTRSLSQSL 214

Query: 174 GPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 216
               IRVN V P  + T +  + + +   +    +  P+ R  
Sbjct: 215 VQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQ-FGSNVPMQRPG 256

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  114 bits (289), Expect = 2e-31
 Identities = 61/202 (30%), Positives = 99/202 (49%), Gaps = 16/202 (7%)

Query: 23  GIGRCIVEKLSQHEAIII---ALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIGR I  +L+   A +    A S   A+  + ++  A      V+ D+   +   A  +
Sbjct: 39  GIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFA 98

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            V    G +DVL+NNA + R    L +  ++   S+ D+N+  V   S+  +K M+  + 
Sbjct: 99  AVIERWGRLDVLVNNAGITRDTLLLRMKRDDW-QSVLDLNLGGVFLCSRAAAKIMLKQR- 156

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G I+N++S+ G+    G   YSA+KA +  +T+T+A EL    I VN+V P  + T M 
Sbjct: 157 SGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDM- 215

Query: 194 RTGWSDPAKAGPMLAKTPLGRF 215
            T      K   +L   PLGR+
Sbjct: 216 -TSELAAEK---LLEVIPLGRY 233

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  113 bits (284), Expect = 7e-31
 Identities = 24/184 (13%), Positives = 60/184 (32%), Gaps = 13/184 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
            +G  I+E   ++   ++ +  +  +                +  +  ++    +     
Sbjct: 14  ALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----GNKNWTEQEQSILEQTASSLQ 69

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
              VD +   A           D     D +   ++ +    +++ +  +   K  G + 
Sbjct: 70  GSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHL---KPGGLLQ 126

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELG--PYNIRVNSVQPTVVMTQMGRTG 196
              + A          Y  +KAA+  +T ++A +    P N  V ++ P  + T M R  
Sbjct: 127 LTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKW 186

Query: 197 WSDP 200
             + 
Sbjct: 187 MPNA 190

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  114 bits (287), Expect = 2e-30
 Identities = 46/199 (23%), Positives = 75/199 (37%), Gaps = 21/199 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQ-----------TVQVDLQDWAR 71
           GIG+ I  K ++  A I+  +KT      L                      VD++D  +
Sbjct: 56  GIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQ 115

Query: 72  TRAAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT 127
             AAV K     G +D+L+NNA+       LD   + L D + +VN +     S+     
Sbjct: 116 ISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRL-DLMMNVNTRGTYLASKACIPY 174

Query: 128 MIDHKIQGSIVNVSSIAGKTA--LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
           +   K    I+N+S          + H  Y+ +K  +      MA E     I VN++ P
Sbjct: 175 LKKSK-VAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFKG-EIAVNALWP 232

Query: 186 -TVVMTQMGRTGWSDPAKA 203
            T + T           ++
Sbjct: 233 KTAIHTAAMDMLGGPGIES 251

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  112 bits (282), Expect = 3e-30
 Identities = 44/211 (20%), Positives = 84/211 (39%), Gaps = 17/211 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           G+G    E+L    A  + L    +  ++  +    N      D+      + A++    
Sbjct: 23  GLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKG 82

Query: 80  --GPVDVLINNAAVARFDRFLDIDEEN-----LIDSIFDVNIKAVINISQVVSKTMIDHK 132
             G VDV +N A +A   +  ++ +           + DVN+    N+ ++V+  M  ++
Sbjct: 83  KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNE 142

Query: 133 IQ-----GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
                  G I+N +S+A      G   YSASK  +  +T  +A +L P  IRV ++ P +
Sbjct: 143 PDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGL 202

Query: 188 VMTQMGRTGWSDPAKAGPMLAKTPLGRFAGK 218
             T +      +      + ++ P     G 
Sbjct: 203 FGTPLLT-SLPEKVCNF-LASQVPFPSRLGD 231

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  111 bits (280), Expect = 4e-30
 Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 15/209 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           G+G  +   L+Q  A ++ L       +         V+    D+ + A   AA++    
Sbjct: 18  GLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQ 77

Query: 80  --GPVDVLINNAAVARFDRFLDIDEE---NLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
             G V  L+N A  A  ++ L        +       VN+    N+ ++ ++ M   +  
Sbjct: 78  EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPD 137

Query: 135 -----GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
                G IVN +SIA      G   Y+ASK  + ++T   A EL  + IRV ++ P +  
Sbjct: 138 ADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFD 197

Query: 190 TQMGRTGWSDPAKAGPMLAKTPLGRFAGK 218
           T M   G     +   + A  P     G+
Sbjct: 198 TPMMA-GMPQDVQDA-LAASVPFPPRLGR 224

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  111 bits (279), Expect = 2e-29
 Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 21/196 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIA---------LSKTQANLDSLKQAFPNVQTVQVDLQDWARTR 73
           G GR   E L+     + A          S  +A     +    +++T+++D+Q      
Sbjct: 16  GFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVD 75

Query: 74  AAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMI 129
            A+ ++    G +DVLI+NA    F        E     ++D+N+ +   +++     M 
Sbjct: 76  RAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQ-FAELYDINVLSTQRVNRAALPHMR 134

Query: 130 DHKIQGSIVNVSSIAGKTALE-GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
             K  G ++ +SS +           Y A+KAA+D+I    A EL  + I  + + P   
Sbjct: 135 RQK-HGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAF 193

Query: 189 MTQMGRTGWSDPAKAG 204
                 +G +  A +G
Sbjct: 194 -----TSGTNHFAHSG 204

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  110 bits (276), Expect = 2e-29
 Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 27/197 (13%)

Query: 23  GIGRCIVEKLSQHEA---IIIALS---KTQANLDSLKQAFPNVQTVQVDLQDWARTRAAV 76
           G+G  +V+ L         +       +    L+ L +   N+  +++DL+++      V
Sbjct: 32  GLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLV 91

Query: 77  SKV------GPVDVLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVV----- 124
           + +        ++VL NNA +A +  R   +  + L+D+    N    I +++       
Sbjct: 92  ADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDT-LQTNTVVPIMLAKACLPLLK 150

Query: 125 -----SKTMIDHKIQGSIVNVSSIAG---KTALEGHTIYSASKAALDSITRTMALELGPY 176
                +++      + +I+N+SSI G        G   Y  SK+AL++ T++++++L P 
Sbjct: 151 KAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQ 210

Query: 177 NIRVNSVQPTVVMTQMG 193
            I   S+ P  V T MG
Sbjct: 211 RIMCVSLHPGWVKTDMG 227

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score =  110 bits (278), Expect = 3e-29
 Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 18/212 (8%)

Query: 23  GIGRCIVEKLSQHEA---IIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWART 72
           GIG  +  +L+   +    + A  +       L +A         +++T+Q+D++D    
Sbjct: 13  GIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSV 72

Query: 73  RAAVSKV--GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID 130
            AA  +V  G VDVL+ NA +        + E+  + S+ DVN+   + + Q     M  
Sbjct: 73  AAARERVTEGRVDVLVCNAGLGLLGPLEALGEDA-VASVLDVNVVGTVRMLQAFLPDM-- 129

Query: 131 HKIQGS--IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
            K +GS  ++   S+ G   L  + +Y ASK AL+ +  ++A+ L P+ + ++ ++   V
Sbjct: 130 -KRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPV 188

Query: 189 MTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLK 220
            T         P +           RF   L 
Sbjct: 189 HTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLA 220

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  108 bits (271), Expect = 1e-28
 Identities = 39/210 (18%), Positives = 77/210 (36%), Gaps = 16/210 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV-- 79
           G+G   V +L      ++          +L        + V  ++       AA+     
Sbjct: 41  GLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQ 100

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENL----IDSIFDVNIKAVINISQVVSKTMIDHKI 133
                  ++ +       R +  D             D+ +    N++++V+ ++   + 
Sbjct: 101 LGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEP 160

Query: 134 Q-----GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
           +     G++V  +SIAG     G T Y+A+KA +  +T   A +L    IRVN++ P  +
Sbjct: 161 RENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTM 220

Query: 189 MTQMGRTGWSDPAKAGPMLAKTPLGRFAGK 218
            T +      + A A    A  P  +  G 
Sbjct: 221 KTPIME-SVGEEALAK-FAANIPFPKRLGT 248

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  111 bits (279), Expect = 1e-28
 Identities = 45/200 (22%), Positives = 83/200 (41%), Gaps = 12/200 (6%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV- 79
           GIG  I E  ++  A  + I +     +L  +         + +D+          + V 
Sbjct: 224 GIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV-GGTALTLDVTADDAVDKITAHVT 282

Query: 80  ----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
               G VD+L+NNA + R     ++DE+   D++  VN+ A   +++ +       +  G
Sbjct: 283 EHHGGKVDILVNNAGITRDKLLANMDEKRW-DAVIAVNLLAPQRLTEGLVGNGTIGE-GG 340

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT 195
            ++ +SS+AG     G T Y+ +KA +  +   +A  L    I +N+V P  + T+M  T
Sbjct: 341 RVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKM--T 398

Query: 196 GWSDPAKAGPMLAKTPLGRF 215
                A          L + 
Sbjct: 399 EAIPLATREVGRRLNSLFQG 418

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  105 bits (265), Expect = 5e-28
 Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 21/207 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           G+GR     L      ++ L       D L++   ++  V+ D+      R AV++    
Sbjct: 13  GLGRAAALALKARGYRVVVL-------D-LRREGEDLIYVEGDVTREEDVRRAVARAQEE 64

Query: 80  GPVDVLINNAAVARFDRFLDIDEE---NLIDSIFDVNIKAVINISQVVSKTMI-----DH 131
            P+  +++ A V   ++ L  +          + +VN+    N+ ++ +  M        
Sbjct: 65  APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAE 124

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
             +G IVN +S+A      G   Y+ASK  + ++T   A EL  + IRV +V P +  T 
Sbjct: 125 GQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTP 184

Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFAGK 218
           + + G  + AKA  + A+ P     G+
Sbjct: 185 LLQ-GLPEKAKAS-LAAQVPFPPRLGR 209

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  105 bits (263), Expect = 9e-28
 Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 28/198 (14%)

Query: 23  GIGRCIVEKLSQ--HEAIIIALSKTQANLDSLKQ-AFPNVQTVQVDLQDWARTRAAVSKV 79
           GIG  +V++L +  +   IIA ++       LK      V  + + +         VSKV
Sbjct: 14  GIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKV 73

Query: 80  G------PVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQ---------- 122
           G       + +LINNA V   +    + +   + +   DVN  +V+ ++Q          
Sbjct: 74  GEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAE-QLDVNTTSVVLLTQKLLPLLKNAA 132

Query: 123 VVSKTMIDHKIQGSIVNVSSIAG-------KTALEGHTIYSASKAALDSITRTMALELGP 175
                      + +++ +SS  G        +A      Y  SKAA++   RT+A++L  
Sbjct: 133 SKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKD 192

Query: 176 YNIRVNSVQPTVVMTQMG 193
            N+ V +  P  V T +G
Sbjct: 193 DNVLVVNFCPGWVQTNLG 210

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  104 bits (262), Expect = 2e-27
 Identities = 42/209 (20%), Positives = 85/209 (40%), Gaps = 17/209 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           G+G    ++L    A ++ L     ++  +       +    D+ D A   +A+      
Sbjct: 20  GLGLATTKRLLDAGAQVVVLDIRGEDV--VADLGDRARFAAADVTDEAAVASALDLAETM 77

Query: 80  GPVDVLINNAAVARFDRFLDIDE---ENLIDSIFDVNIKAVINISQVVSKTMI------- 129
           G + +++N A      R L  D          I D+N+    N+ ++ ++ +        
Sbjct: 78  GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGP 137

Query: 130 DHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
           + + +G I+N +S+A      G   YSASK  +  +T  +A +L  + IRV ++ P +  
Sbjct: 138 NAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFD 197

Query: 190 TQMGRTGWSDPAKAGPMLAKTPLGRFAGK 218
           T +      + A+A  +  + P     G 
Sbjct: 198 TPLLA-SLPEEARAS-LGKQVPHPSRLGN 224

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 97.5 bits (243), Expect = 1e-23
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 8/140 (5%)

Query: 54  QAFPNVQTVQVDLQDWAR-TRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDV 112
            A  +   V     D  +    AV   G V V+INNA + R      + E++    + DV
Sbjct: 67  VAVADYNNVL----DGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKD-YKLVIDV 121

Query: 113 NIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALE 172
           ++     +++         K  G IVN SS AG     G   Y+++K+AL     T+A E
Sbjct: 122 HLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKE 180

Query: 173 LGPYNIRVNSVQPTVVMTQM 192
              YNI+ N++ P    ++M
Sbjct: 181 GAKYNIKANAIAPL-ARSRM 199

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 94.8 bits (236), Expect = 2e-22
 Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 5/144 (3%)

Query: 62  VQVDLQDWART--RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVIN 119
            Q D+   +    +  + K G +D+L+NNA + R   F  + ++   DS+  V++    N
Sbjct: 374 DQHDVAKDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQE-WDSVQQVHLIGTFN 432

Query: 120 ISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIR 179
           +S++     ++ +  G I+N++S +G     G   YS+SKA +  +++TMA+E    NI+
Sbjct: 433 LSRLAWPYFVEKQ-FGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIK 491

Query: 180 VNSVQPTVVMTQMGRTGWSDPAKA 203
           VN V P    T M  +   +  K 
Sbjct: 492 VNIVAPH-AETAMTLSIMREQDKN 514

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 94.0 bits (234), Expect = 6e-23
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 73  RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           + A+   G +DV++NNA + R   F  I +E+  D I  V+++    +++     M    
Sbjct: 84  KTALDTFGRIDVVVNNAGILRDRSFSRISDED-WDIIQRVHLRGSFQVTRAAWDHMKKQN 142

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G I+  +S +G     G   YSA+K  L  +  T+ +E    NI  N++ P    ++M
Sbjct: 143 -YGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPN-AGSRM 200

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 89.1 bits (221), Expect = 1e-20
 Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 9/151 (5%)

Query: 65  DLQDWAR-TRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQV 123
            + D A+    A+   G VD+L+NNA + R    +   E++  + + DV++K     +Q 
Sbjct: 85  SVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQD-WNLVNDVHLKGSFKCTQA 143

Query: 124 VSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSV 183
               M      G I+  SS +G     G   Y+A+K  L  +  T+A+E    N+  N +
Sbjct: 144 AFPYMKKQN-YGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVI 202

Query: 184 QPTVV--MTQ----MGRTGWSDPAKAGPMLA 208
            PT    MT+            P    P++A
Sbjct: 203 VPTAASRMTEGILPDILFNELKPKLIAPVVA 233

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 86.3 bits (214), Expect = 2e-20
 Identities = 52/269 (19%), Positives = 90/269 (33%), Gaps = 74/269 (27%)

Query: 23  GIGRCIVEKL-SQHEAIIIA----LSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG  IV  L       ++     +++ QA +  L+    + +  Q+D+ D    RA   
Sbjct: 15  GIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRD 74

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            +    G +DVL+NNA +A              +     N     ++   +   +   K 
Sbjct: 75  FLRKEYGGLDVLVNNAGIAFKVADPTPFHIQ-AEVTMKTNFFGTRDVCTELLPLI---KP 130

Query: 134 QGSIVNVSSIAGKTALEGH----------------------------------------- 152
           QG +VNVSSI    AL+                                           
Sbjct: 131 QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPS 190

Query: 153 TIYSASKAALDSITRTMALEL----GPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLA 208
           + Y  +K  +  ++R  A +L        I +N+  P  V T M     +   + G   A
Sbjct: 191 SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEG---A 247

Query: 209 KTPL-------------GRFAGKLKPKPW 224
           +TP+             G+F  + + + W
Sbjct: 248 ETPVYLALLPPDAEGPHGQFVSEKRVEQW 276

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 87.0 bits (216), Expect = 2e-20
 Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 7/125 (5%)

Query: 73  RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           + AV   G +DVL+NNA + R     +  EE   D++  V++K      +  +       
Sbjct: 106 QTAVETFGGLDVLVNNAGIVRDRMIANTSEEEF-DAVIAVHLKGHFATMRHAAAYWRGLS 164

Query: 133 IQ-----GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
                  G I+N SS AG     G   YSA+KA + ++T   A E+G Y + VN++ P+ 
Sbjct: 165 KAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS- 223

Query: 188 VMTQM 192
             T+M
Sbjct: 224 ARTRM 228

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 66.1 bits (161), Expect = 5e-13
 Identities = 56/295 (18%), Positives = 101/295 (34%), Gaps = 99/295 (33%)

Query: 23  GIGRCIVEKLSQHEAIIIA----LSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAV- 76
           GIG  I ++LS +  +++     ++K    ++ LK +   NV   Q+D+ D   T +++ 
Sbjct: 23  GIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLA 82

Query: 77  ----SKVGPVDVLINNAAVARFDRFLDIDEENLIDS------------------------ 108
               +  G +D+L+NNA VA F    D  +  + D                         
Sbjct: 83  DFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETY 142

Query: 109 -----IFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGH----------- 152
                   +N   V ++++V+   +        IVNVSS  G      +           
Sbjct: 143 ELAEECLKINYNGVKSVTEVLIPLLQLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGD 201

Query: 153 --------------------------------TIYSASKAALDSITRTMALELGPYNIRV 180
                                             Y+ SKA L++ TR +A ++     +V
Sbjct: 202 ALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIP--KFQV 259

Query: 181 NSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPL-----------GRFAGKLKPKPW 224
           N V P +V T+M     +  A+ G   A+  +           G F    +   +
Sbjct: 260 NCVCPGLVKTEMNYGIGNYTAEEG---AEHVVRIALFPDDGPSGFFYDCSELSAF 311

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 44/225 (19%), Positives = 70/225 (31%), Gaps = 59/225 (26%)

Query: 23  GIGRCIVEKLSQHEA-IIIA---LSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK 78
           G+G     +L++  A +I+A     K +A   ++      V+  ++DLQD +  R     
Sbjct: 27  GLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG---QVEVRELDLQDLSSVRRFADG 83

Query: 79  VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH------- 131
           V   DVLINNA +      L +D     +S    N                 H       
Sbjct: 84  VSGADVLINNAGIMAVPYALTVDG---FESQIGTN-----------------HLGHFALT 123

Query: 132 -----KIQGSIVNVSSIA-------------GKTALEGHTIYSASKAALDSITRTMA--L 171
                ++   +V VSS+A                       YS SK A    T  +   L
Sbjct: 124 NLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRL 183

Query: 172 ELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKA-----GPMLAKTP 211
                 +R  +  P    T +          A       ++A   
Sbjct: 184 TAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDA 228

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 49.1 bits (118), Expect = 3e-07
 Identities = 30/150 (20%), Positives = 71/150 (47%), Gaps = 12/150 (8%)

Query: 44  KTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLINNAAVARFD---- 95
           + +   + L +A       + D+       A  + V    G +D L++  A A  +    
Sbjct: 45  RLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEG 104

Query: 96  RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIY 155
           R++D   ++ + +  +V+  +++ +++     + +    G IV ++  A +  +  + + 
Sbjct: 105 RYIDTRRQDWLLA-LEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEKVVPKYNVM 160

Query: 156 SASKAALDSITRTMALELGPYNIRVNSVQP 185
           + +KAAL++  R +A ELGP  +RVN++  
Sbjct: 161 AIAKAALEASVRYLAYELGPKGVRVNAISA 190

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 48.1 bits (115), Expect = 6e-07
 Identities = 33/159 (20%), Positives = 54/159 (33%), Gaps = 34/159 (21%)

Query: 24  IGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVD 83
           +GR + E+L+    I+        +L  L  A PN + VQ DL D     A V+     D
Sbjct: 15  LGRVMRERLAPMAEILRLA-----DLSPLDPAGPNEECVQCDLADANAVNAMVAG---CD 66

Query: 84  VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSI 143
            +++   ++          E   + I   NI  + N+ +        H     IV  SS 
Sbjct: 67  GIVHLGGISV---------EKPFEQILQGNIIGLYNLYEA----ARAHGQP-RIVFASSN 112

Query: 144 A--G----------KTALEGHTIYSASKAALDSITRTMA 170
              G                  +Y  SK   +++ R   
Sbjct: 113 HTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYF 151

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 47.6 bits (114), Expect = 8e-07
 Identities = 30/112 (26%), Positives = 61/112 (54%), Gaps = 8/112 (7%)

Query: 78  KVGPVDVLINNAAVARFD----RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            VG +D + ++ A A  +    RF +   E  + +  D++  ++  ++    K M +   
Sbjct: 109 DVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLA-QDISSYSLTIVAHEAKKLMPE--- 164

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
            GSIV  + + G+ A++ + +   +KA+L++  + +AL+LGP NIRVN++  
Sbjct: 165 GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISA 216

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 46.8 bits (112), Expect = 2e-06
 Identities = 29/170 (17%), Positives = 75/170 (44%), Gaps = 16/170 (9%)

Query: 28  IVEKLSQHEAIIIALS----KTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV---- 79
           I +   +  A + A +    K +  +  + + F +   V+ D+      +     +    
Sbjct: 39  IAKSFHREGAQL-AFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW 97

Query: 80  GPVDVLINNAAVARFD----RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
           G +D+++++ A A  +      +D   E    +  D+++ ++I +++ +   M      G
Sbjct: 98  GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIA-MDISVYSLIALTRELLPLMEGR--NG 154

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
           +IV +S    +  +  + +   +KAAL+S  R +A ++  +  R+N++  
Sbjct: 155 AIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISA 204

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 46.0 bits (110), Expect = 3e-06
 Identities = 27/170 (15%), Positives = 76/170 (44%), Gaps = 17/170 (10%)

Query: 28  IVEKLSQHEAIIIALS----KTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV---- 79
           I +      A + A +      +  +  + Q   +    ++D+      ++  + V    
Sbjct: 24  IAQSCFNQGATL-AFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 82

Query: 80  GPVDVLINNAAVARFD----RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
           G +D ++++ A A  +      L+  +     +  ++++ ++I ++  +   + +     
Sbjct: 83  GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTA-MEISVYSLIELTNTLKPLLNN---GA 138

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
           S++ +S +     +  + +   +KAAL+S  R +A++LG ++IRVN++  
Sbjct: 139 SVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSA 188

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 45.7 bits (109), Expect = 4e-06
 Identities = 36/170 (21%), Positives = 78/170 (45%), Gaps = 17/170 (10%)

Query: 28  IVEKLSQHEAIIIALS----KTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV---- 79
           I +   +  A + A +      +  ++ L +          D+ D A   A    +    
Sbjct: 49  IAKAAREAGAEL-AFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107

Query: 80  GPVDVLINNAAVARFD----RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
           G +D L++    +  D    R++D  E N  +++  +++ ++  +S+   K M D    G
Sbjct: 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTM-LISVYSLTAVSRRAEKLMAD---GG 163

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
           SI+ ++    +  +  + +   +KAAL++  + +A++LGP NIRVN++  
Sbjct: 164 SILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISA 213

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 45.7 bits (109), Expect = 5e-06
 Identities = 34/170 (20%), Positives = 73/170 (42%), Gaps = 17/170 (10%)

Query: 28  IVEKLSQHEAIIIALS----KTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV---- 79
           I + +    A + AL+      +  +D L ++     TV  D+ D          +    
Sbjct: 48  IAKAVCAQGAEV-ALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW 106

Query: 80  GPVDVLINNAAVARFD----RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
           G +D +++  A +  +    R++D    N + S+  ++  +   I+      M +    G
Sbjct: 107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSM-HISCYSFTYIASKAEPLMTN---GG 162

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
           SI+ +S    +  +  + +    KAAL++  + +A++LG   IRVN++  
Sbjct: 163 SILTLSYYGAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISA 212

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 45.2 bits (108), Expect = 5e-06
 Identities = 24/112 (21%), Positives = 57/112 (50%), Gaps = 8/112 (7%)

Query: 78  KVGPVDVLINNAAVARFD----RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +VG +  + +  A A  +     +L+ + +  + +  +++  ++  + +     M +   
Sbjct: 84  QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAH-NISSYSLTAVVKAARPMMTE--- 139

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
            GSIV ++ + G+  +  + +   +KA+LD+  + +A +LG  NIRVNS+  
Sbjct: 140 GGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISA 191

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 45.2 bits (108), Expect = 6e-06
 Identities = 13/51 (25%), Positives = 30/51 (58%)

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
            +++ +S +  + A+  + +   +KA+L++  R MA  +GP  +RVN++  
Sbjct: 142 SALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISA 192

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 16/51 (31%), Positives = 28/51 (54%)

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
            S+V ++ I  + A+  +     +KA+L++  R  AL LG   I+VN+V  
Sbjct: 159 ASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSA 209

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 44.5 bits (106), Expect = 1e-05
 Identities = 14/51 (27%), Positives = 29/51 (56%)

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQP 185
            S++ +S +  + A+  +     +KAAL++  R +A+ LG   +RVN++  
Sbjct: 147 ASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISA 197

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 12/25 (48%), Positives = 17/25 (68%)

Query: 159 KAALDSITRTMALELGPYNIRVNSV 183
           K+AL+S+ R +A E G Y +R N V
Sbjct: 165 KSALESVNRFVAREAGKYGVRSNLV 189

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450

 Score = 44.1 bits (103), Expect = 2e-05
 Identities = 12/65 (18%), Positives = 27/65 (41%), Gaps = 3/65 (4%)

Query: 23 GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           + R  ++ L+     +    +T  +   L     +   + +D+ D A   A V+K    
Sbjct: 13 FVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAK---H 69

Query: 83 DVLIN 87
          D++I+
Sbjct: 70 DLVIS 74

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 42.8 bits (101), Expect = 4e-05
 Identities = 23/92 (25%), Positives = 46/92 (50%), Gaps = 6/92 (6%)

Query: 96  RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIY 155
             L+   +  + +I   +  + +++       M      G+ ++++ IA +  + G+   
Sbjct: 136 PLLETSRKGYLAAI-SASSYSFVSLLSHFLPIMNP---GGASISLTYIASERIIPGYGGG 191

Query: 156 -SASKAALDSITRTMALELGP-YNIRVNSVQP 185
            S++KAAL+S TR +A E G   NIRVN++  
Sbjct: 192 MSSAKAALESDTRVLAFEAGRKQNIRVNTISA 223

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 42.5 bits (100), Expect = 5e-05
 Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 12/127 (9%)

Query: 96  RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHT-I 154
             L+   +  + +    +  + +++ Q     M +    GS V +S +A +  + G+   
Sbjct: 137 PLLETSRKGYLAAS-SNSAYSFVSLLQHFGPIMNE---GGSAVTLSYLAAERVVPGYGGG 192

Query: 155 YSASKAALDSITRTMALELGP-YNIRVNSVQPTVVMTQMGR--TGWSDPAKAGPML---- 207
            S++KAAL+S TRT+A E G  Y +RVN++    + ++         + +     +    
Sbjct: 193 MSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSY 252

Query: 208 AKTPLGR 214
              PL R
Sbjct: 253 NNAPLRR 259

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 42.5 bits (100), Expect = 5e-05
 Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 12/127 (9%)

Query: 96  RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIY 155
             L    +  + ++   +  + +++ Q     M +    GS + +S IA +  + G+   
Sbjct: 150 PLLQTSRKGYLAAV-SSSSYSFVSLLQHFLPLMKE---GGSALALSYIASEKVIPGYGGG 205

Query: 156 -SASKAALDSITRTMALELG-PYNIRVNSVQPTVVMTQMGR--TGWSDPAKAGPML---- 207
            S++KAAL+S  RT+A E G    +RVN +    + ++         D       +    
Sbjct: 206 MSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSE 265

Query: 208 AKTPLGR 214
           A  PL +
Sbjct: 266 ANAPLQK 272

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 41.0 bits (96), Expect = 2e-04
 Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 6/90 (6%)

Query: 96  RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHT-I 154
             L+   +  +D++   +  ++I++ +     M     Q SI++++  A +  + G+   
Sbjct: 130 DLLNTSRKGYLDAL-SKSSYSLISLCKYFVNIMKP---QSSIISLTYHASQKVVPGYGGG 185

Query: 155 YSASKAALDSITRTMALELGP-YNIRVNSV 183
            S++KAAL+S TR +A  LG  YNIR+N++
Sbjct: 186 MSSAKAALESDTRVLAYHLGRNYNIRINTI 215

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 40.1 bits (93), Expect = 4e-04
 Identities = 12/60 (20%), Positives = 18/60 (30%), Gaps = 2/60 (3%)

Query: 134 QGSIVNVSSIAGKTALE--GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
               V  S I  +       H     +K  LD   + +   L  +    N      V+TQ
Sbjct: 238 GARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQ 297

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score = 39.2 bits (92), Expect = 6e-04
 Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 35/153 (22%)

Query: 24  IGRCIVEKLSQ---HEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVG 80
           IG  +V  L++    + +I          D +++    ++ + +D+ +      AV K  
Sbjct: 11  IGTELVPYLAEKYGKKNVIA--------SDIVQRDTGGIKFITLDVSNRDEIDRAVEKYS 62

Query: 81  PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNV 140
            +D + + A +      L    E      + VN+    NI +        H+++  +V  
Sbjct: 63  -IDAIFHLAGI------LSAKGEKDPALAYKVNMNGTYNILEA----AKQHRVE-KVVIP 110

Query: 141 SSIA--G----------KTALEGHTIYSASKAA 161
           S+I   G           T     T++  +K A
Sbjct: 111 STIGVFGPETPKNKVPSITITRPRTMFGVTKIA 143

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	238
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.98
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.97
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.97
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.95
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.95
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.94
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.94
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.93
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.93
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.93
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.92
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.9
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.9
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.9
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.9
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.89
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.89
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.89
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.88
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.88
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.88
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.88
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.88
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.88
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.88
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.88
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.88
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.87
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.87
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.87
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.87
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.87
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.86
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.86
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.86
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.86
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.86
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.86
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.85
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.85
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.85
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.85
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.85
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.84
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.84
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.84
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.84
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.84
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.84
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.84
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.84
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.83
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.83
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.83
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.83
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.83
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.83
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.82
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.82
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.81
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.81
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.81
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.81
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.81
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.8
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.8
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.78
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.78
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.77
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.77
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.77
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.76
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.75
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.75
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.75
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.74
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.74
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.74
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.72
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.72
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.7
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.7
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.69
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.69
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.68
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.67
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.65
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.65
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.65
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.64
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.64
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.61
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.59
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.58
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.56
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.55
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.51
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.19
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.18
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.15
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.94
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.93
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.76
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.75
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.69
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.69
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.54
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.54
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.52
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.51
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.47
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.45
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.44
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.43
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.39
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.39
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.38
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.37
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.35
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.35
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.34
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.31
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.31
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.21
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.17
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.17
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.16
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.14
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.13
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.12
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.12
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.06
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.99
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.96
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.92
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.91
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.86
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.84
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.82
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.81
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.8
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.77
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.77
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.77
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.75
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.75
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.69
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.68
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.66
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.64
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.62
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.62
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.6
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.59
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.58
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.54
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.54
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.53
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.53
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.51
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.49
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.43
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.41
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.4
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.38
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.35
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.33
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.25
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.23
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.18
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.17
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.16
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.16
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.15
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.14
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.12
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	97.09
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.08
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.06
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.06
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.05
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.04
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.02
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.01
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.01
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.0
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.99
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.97
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.93
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.89
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.88
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.85
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.84
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.83
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.83
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.83
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.81
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.77
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.75
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.74
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.73
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.72
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.68
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.67
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.66
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.64
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.58
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.56
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.53
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.53
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.52
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.52
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	96.41
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.4
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	96.4
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.38
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.27
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.26
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.22
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.2
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.16
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.11
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.09
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.03
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.99
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.95
1lnq_A	336	MTHK channels, potassium channel related protein;	95.92
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	95.91
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	95.91
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.85
3tl2_A	315	Malate dehydrogenase; center for structural genomi	95.8
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	95.78
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.75
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	95.73
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	95.73
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	95.64
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.56
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	95.53
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	95.52
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	95.43
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	95.38
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.37
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	95.34
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.32
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.32
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	95.3
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.27
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.25
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.22
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.19
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.12
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	95.11
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.1
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	95.09
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.01
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	94.98
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	94.92
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	94.92
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	94.82
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	94.8
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	94.8
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	94.76
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	94.73
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	94.72
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	94.65
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	94.62
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	94.6
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	94.53
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	94.41
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	94.4
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	94.4
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	94.36
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	94.36
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	94.32
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	94.32
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	94.3
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	94.27
3qha_A	296	Putative oxidoreductase; seattle structural genomi	94.25
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	94.23
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	94.2
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	94.15
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	94.1

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=7.9e-55  Score=347.66  Aligned_cols=223  Identities=24%  Similarity=0.265  Sum_probs=202.3

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHH----HhhCCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSL----KQAFPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      ..+.++++||||++|||+++|+.|+++|++|++++|+++.+++.    .+...++..+++|++|++++++++++    +|
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI   85 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            45678889999999999999999999999999999999876654    44446788999999999999887754    58


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||+....++.+.+.++ |++++++|+.++++++|+++|+|.+++.+|+||++||..+..+.++..+|++||+
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~-~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKa  164 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELEN-WQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKG  164 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence            999999999999889999999998 9999999999999999999999987654799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+.+|+|+++.|++++|||||+|+||+++|+|......+++..+.+...+|++|+++|+|+|++++||+|+.
T Consensus       165 al~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~  236 (255)
T 4g81_D          165 GIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKA  236 (255)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999998766556666666778899999999999999999999984

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=9e-55  Score=344.39  Aligned_cols=222  Identities=21%  Similarity=0.298  Sum_probs=201.6

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh--HhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ--ANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      ..+.+|++||||++|||+++|+.|+++|++|++++|+.  +..+++.+...+...+++|++|+++++++++ .|++|++|
T Consensus         6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-~g~iDiLV   84 (247)
T 4hp8_A            6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFT-DAGFDILV   84 (247)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-TTCCCEEE
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-hCCCCEEE
Confidence            35678899999999999999999999999999999985  4466677777789999999999998887765 48899999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||+....++.+.+.++ |++++++|+.++|+++|+++|+|.+++..|+||++||..+..+.++..+|++||+|+.+|+
T Consensus        85 NNAGi~~~~~~~~~~~~~-w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~lt  163 (247)
T 4hp8_A           85 NNAGIIRRADSVEFSELD-WDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLT  163 (247)
T ss_dssp             ECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCcccccHHH-HHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHH
Confidence            999999888999999998 9999999999999999999999988765799999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++.|++++|||||+|+||+++|+|.+....+++..+.+.+.+|++|+++|+|||++++||+|+.
T Consensus       164 r~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~  229 (247)
T 4hp8_A          164 KLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAA  229 (247)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGG
T ss_pred             HHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999998765555555666778899999999999999999999984

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=5.5e-54  Score=339.21  Aligned_cols=215  Identities=24%  Similarity=0.335  Sum_probs=192.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ..++++||||++|||+++|+.|+++|++|++++|+.+.+++.  ....+..+++|++|+++++++++++|++|++|||||
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAG   87 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP--RHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAG   87 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC--CCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh--hcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            567889999999999999999999999999999998776532  234688899999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHH
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMA  170 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~  170 (238)
                      +..  +..+.+.++ |++++++|+.++++++|+++|.|+++  +|+||++||..+..+.++..+|++||+|+.+|+|+++
T Consensus        88 i~~--~~~~~~~~~-w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA  162 (242)
T 4b79_A           88 ISR--DREEYDLAT-FERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLA  162 (242)
T ss_dssp             CCC--GGGGGSHHH-HHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCC--CcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            864  566788887 99999999999999999999999765  5999999999999999999999999999999999999


Q ss_pred             HHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        171 LELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       171 ~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .|++++|||||+|+||+++|||......+++..+.+.+.+|++|+++|+|||++++||+|+.
T Consensus       163 ~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~  224 (242)
T 4b79_A          163 CEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPG  224 (242)
T ss_dssp             HHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred             HHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999998876666666777788999999999999999999999984

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=2e-53  Score=339.41  Aligned_cols=221  Identities=23%  Similarity=0.268  Sum_probs=194.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      .+.+|++||||++|||+++|+.|+++|++|++++|++++++++.++    ..++.++++|++|++++++++++    +|+
T Consensus         5 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   84 (254)
T 4fn4_A            5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR   84 (254)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3456888899999999999999999999999999999887766544    35788999999999999887754    599


Q ss_pred             ccEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         82 VDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        82 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      +|++|||||+.. ..++.+.+.++ |++++++|+.++++++|+++|+|.+++ +|+||++||..+..+.++..+|++||+
T Consensus        85 iDiLVNNAGi~~~~~~~~~~~~e~-~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~~~~~~Y~asKa  162 (254)
T 4fn4_A           85 IDVLCNNAGIMDGVTPVAEVSDEL-WERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGFAGAPYTVAKH  162 (254)
T ss_dssp             CCEEEECCCCCCTTCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSSSSCHHHHHHHH
T ss_pred             CCEEEECCcccCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCCCCChHHHHHHH
Confidence            999999999874 46788899998 999999999999999999999999888 799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCc--cCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK--AGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~--~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+.+|+|+++.|++++|||||+|+||+++|+|.......++.  ........|++|+++|+|||++++||+|+.
T Consensus       163 al~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~  236 (254)
T 4fn4_A          163 GLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDE  236 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999997665443322  122334468899999999999999999984

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=7.8e-53  Score=339.04  Aligned_cols=225  Identities=23%  Similarity=0.254  Sum_probs=193.0

Q ss_pred             eeeCC-CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----
Q psy14567          5 AKLHP-DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----   78 (238)
Q Consensus         5 ~~l~~-~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----   78 (238)
                      ++++. .+.+|++||||++|||+++|+.|+++|++|++++|+++.+++..++. .+...+++|++|++++++++++    
T Consensus        21 ~~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~  100 (273)
T 4fgs_A           21 QSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAE  100 (273)
T ss_dssp             ----CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            34444 36789999999999999999999999999999999999988876665 4688899999999999887754    


Q ss_pred             cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHH
Q psy14567         79 VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      +|++|++|||||+....++.+.+.++ |++++++|+.++++++++++|+|++   .|+||+++|..+..+.++..+|++|
T Consensus       101 ~G~iDiLVNNAG~~~~~~~~~~~~e~-w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~~~~~~~~~~~~Y~as  176 (273)
T 4fgs_A          101 AGRIDVLFVNAGGGSMLPLGEVTEEQ-YDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGSTAGSTGTPAFSVYAAS  176 (273)
T ss_dssp             HSCEEEEEECCCCCCCCCTTSCCHHH-HHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGGSCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhccHHH-HHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeehhhccCCCCchHHHHH
Confidence            59999999999999889999999998 9999999999999999999999964   4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC-----CccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP-----AKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      |+|+.+|+|+++.|++++|||||+|+||+++|++..+.....     +..+.+...+|++|+++|+|||++++||+|+..
T Consensus       177 Kaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a  256 (273)
T 4fgs_A          177 KAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDS  256 (273)
T ss_dssp             HHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            999999999999999999999999999999999976543221     233445677999999999999999999999853

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=9.5e-52  Score=328.41  Aligned_cols=209  Identities=20%  Similarity=0.262  Sum_probs=192.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHH----hcCCccEEEEc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS----KVGPVDVLINN   88 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~----~~g~id~li~~   88 (238)
                      ++++||||++|||+++|++|+++|++|++++|+++.++++.++.++...+++|++|+++++++++    ++|++|++|||
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN   82 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN   82 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            67899999999999999999999999999999999999999998899999999999999988775    45999999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRT  168 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~  168 (238)
                      ||+....++.+.+.++ |++++++|+.+++++++++.|+|.++  +|+||++||..+..+.++..+|++||+|+.+|+|+
T Consensus        83 AG~~~~~~~~~~~~e~-~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~  159 (247)
T 3ged_A           83 ACRGSKGILSSLLYEE-FDYILSVGLKAPYELSRLCRDELIKN--KGRIINIASTRAFQSEPDSEAYASAKGGIVALTHA  159 (247)
T ss_dssp             CCCCCCCGGGTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEeecccccCCCCCHHHHHHHHHHHHHHHH
Confidence            9999888999999998 99999999999999999999999875  48999999999999999999999999999999999


Q ss_pred             HHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        169 MALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       169 l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++.|+++ |||||+|+||+++|++.+.      ..+.....+|++|+++|+|||++++||+|+
T Consensus       160 lA~ela~-~IrVN~I~PG~i~t~~~~~------~~~~~~~~~Pl~R~g~pediA~~v~fL~s~  215 (247)
T 3ged_A          160 LAMSLGP-DVLVNCIAPGWINVTEQQE------FTQEDCAAIPAGKVGTPKDISNMVLFLCQQ  215 (247)
T ss_dssp             HHHHHTT-TSEEEEEEECSBCCCC---------CCHHHHHTSTTSSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHCC-CCEEEEEecCcCCCCCcHH------HHHHHHhcCCCCCCcCHHHHHHHHHHHHhC
Confidence            9999998 9999999999999998643      334455678999999999999999999986

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=1.9e-50  Score=323.60  Aligned_cols=219  Identities=30%  Similarity=0.343  Sum_probs=189.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh---HHHHHhhCCCceEEEeecCCHHHHHHHHH----hcCCc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN---LDSLKQAFPNVQTVQVDLQDWARTRAAVS----KVGPV   82 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~D~~~~~~v~~~~~----~~g~i   82 (238)
                      .+.+|++||||++|||+++|++|+++|++|++++|+.+.   .+++.+..++..++++|++|+++++++++    ++|++
T Consensus         5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            466889999999999999999999999999999998764   44556667789999999999999887765    45999


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||+.... ..+.+.++ |++.+++|+.++++++++++|+|+++  +|+||++||..+..+.++..+|++||+|+
T Consensus        85 DiLVNnAGi~~~~-~~~~~~e~-~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~~~~~~~~Y~asKaav  160 (258)
T 4gkb_A           85 DGLVNNAGVNDGI-GLDAGRDA-FVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNISSKTAVTGQGNTSGYCASKGAQ  160 (258)
T ss_dssp             CEEEECCCCCCCC-CTTSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTHHHHCCSSCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCC-CccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEeehhhccCCCCchHHHHHHHHH
Confidence            9999999987544 45777787 99999999999999999999999755  48999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC----CCCccCCcccCCCCC-CcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS----DPAKAGPMLAKTPLG-RFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~-r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+|+|+++.|++++|||||+|+||+++|+|.+....    +++..+....+.|++ |+++|+|||++++||+|+.
T Consensus       161 ~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~  235 (258)
T 4gkb_A          161 LALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPR  235 (258)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999876432    223344566778985 9999999999999999984

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1.7e-49  Score=318.89  Aligned_cols=217  Identities=21%  Similarity=0.264  Sum_probs=186.8

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHH----hcCCcc
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS----KVGPVD   83 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~----~~g~id   83 (238)
                      -..+.++++||||++|||+++|++|+++|++|++++|++++      ..+...++++|++++++++++++    ++|++|
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   80 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE------GLPEELFVEADLTTKEGCAIVAEATRQRLGGVD   80 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT------TSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCS
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh------CCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            34567889999999999999999999999999999998643      23345678999999999887775    459999


Q ss_pred             EEEEccCCCCC--CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCC-CCchhhHHHH
Q psy14567         84 VLINNAAVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALE-GHTIYSASKA  160 (238)
Q Consensus        84 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~~~~y~~sK~  160 (238)
                      ++|||||+...  .++.+.+.++ |++.+++|+.++++++++++|+|.+++ .|+||++||..+..+.+ +...|++||+
T Consensus        81 ilVnnAG~~~~~~~~~~~~~~e~-~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~~~~~~~Y~asKa  158 (261)
T 4h15_A           81 VIVHMLGGSSAAGGGFSALSDDD-WYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPLPESTTAYAAAKA  158 (261)
T ss_dssp             EEEECCCCCCCCSSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTTCHHHHHHHH
T ss_pred             EEEECCCCCccCCCCcccCCHHH-HHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCCCCccHHHHHHHH
Confidence            99999997643  4678888888 999999999999999999999999887 79999999999988865 6789999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC--------CC----CCccCCcccCCCCCCcCCCCCcccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW--------SD----PAKAGPMLAKTPLGRFAGKLKPKPWNRWL  228 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~--------~~----~~~~~~~~~~~~~~r~~~~~~ia~~~~~l  228 (238)
                      |+.+|+|+++.|++++|||||+|+||+++|++.....        ..    ++........+|++|+++|+|||++++||
T Consensus       159 al~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fL  238 (261)
T 4h15_A          159 ALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFL  238 (261)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999864311        11    12233445678999999999999999999


Q ss_pred             cccc
Q psy14567        229 LPSV  232 (238)
Q Consensus       229 ~s~~  232 (238)
                      +|+.
T Consensus       239 aS~~  242 (261)
T 4h15_A          239 ASDR  242 (261)
T ss_dssp             HSGG
T ss_pred             hCch
Confidence            9985

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=1.3e-48  Score=314.02  Aligned_cols=220  Identities=21%  Similarity=0.254  Sum_probs=192.4

Q ss_pred             CCCcCCCCCCCCCC--chHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeecCCHHHHHHHHH----
Q psy14567          9 PDRTNTKGGDYPKP--GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVS----   77 (238)
Q Consensus         9 ~~~~~v~~itG~s~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~----   77 (238)
                      ..+.++++||||+|  |||+++|++|+++|++|++++|+++.++++.+..     +++.++++|++++++++++++    
T Consensus         3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (256)
T 4fs3_A            3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK   82 (256)
T ss_dssp             CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34567888999875  9999999999999999999999988766654432     358889999999999988775    


Q ss_pred             hcCCccEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCc
Q psy14567         78 KVGPVDVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHT  153 (238)
Q Consensus        78 ~~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  153 (238)
                      ++|++|++|||||+...    .++.+.+.++ |...+++|+.+++.+.+.+.+.+.+   +|+||++||..+..+.++..
T Consensus        83 ~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~-~~~~~~vn~~~~~~~~~~~~~~~~~---~G~IVnisS~~~~~~~~~~~  158 (256)
T 4fs3_A           83 DVGNIDGVYHSIAFANMEDLRGRFSETSREG-FLLAQDISSYSLTIVAHEAKKLMPE---GGSIVATTYLGGEFAVQNYN  158 (256)
T ss_dssp             HHCCCSEEEECCCCCCGGGGTSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHTTCTT---CEEEEEEECGGGTSCCTTTH
T ss_pred             HhCCCCEEEeccccccccccccccccCCHHH-HHHHHHHHHHHHHHHHHHHHHHhcc---CCEEEEEeccccccCcccch
Confidence            45999999999998654    3345666777 9999999999999999999887654   58999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .|++||+|+.+|+|+++.|++++|||||+|+||+++|++.+.....++..+.+.+.+|++|+++|+|||++++||+|+.
T Consensus       159 ~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~  237 (256)
T 4fs3_A          159 VMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDL  237 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             hhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999999998776555666677788899999999999999999999984

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.1e-45  Score=297.28  Aligned_cols=224  Identities=24%  Similarity=0.314  Sum_probs=192.6

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHhc---
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSKV---   79 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~---   79 (238)
                      +-..+.++++||||++|||+++|++|+++|++|++++|+.+.++++.++.    ..+.++++|++|+++++++++++   
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (283)
T 3v8b_A           23 MMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLK  102 (283)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            33445678999999999999999999999999999999998877766553    46889999999999998887654   


Q ss_pred             -CCccEEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc--cCCCCchh
Q psy14567         80 -GPVDVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT--ALEGHTIY  155 (238)
Q Consensus        80 -g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~y  155 (238)
                       |++|++|||||+... .++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..  +.++...|
T Consensus       103 ~g~iD~lVnnAg~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~~~Y  180 (283)
T 3v8b_A          103 FGHLDIVVANAGINGVWAPIDDLKPFE-WDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFTTPGATAY  180 (283)
T ss_dssp             HSCCCEEEECCCCCCCBCCTTTSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCSTTCHHH
T ss_pred             hCCCCEEEECCCCCCCCCchhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCCCCCchHH
Confidence             899999999998644 6788888888 999999999999999999999998877 79999999999877  77889999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCc-----cCCcccCCCC--CCcCCCCCcccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK-----AGPMLAKTPL--GRFAGKLKPKPWNRWL  228 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~-----~~~~~~~~~~--~r~~~~~~ia~~~~~l  228 (238)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++........+.     ........|+  +|+++|+|+|++++||
T Consensus       181 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL  260 (283)
T 3v8b_A          181 TATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFL  260 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999997654322221     3334556677  9999999999999999


Q ss_pred             cccc
Q psy14567        229 LPSV  232 (238)
Q Consensus       229 ~s~~  232 (238)
                      +|+.
T Consensus       261 ~s~~  264 (283)
T 3v8b_A          261 VSER  264 (283)
T ss_dssp             TSGG
T ss_pred             cCcc
Confidence            9974

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=5.1e-46  Score=297.80  Aligned_cols=221  Identities=24%  Similarity=0.387  Sum_probs=196.7

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      ...+.++++||||++|||+++|++|+++|++|++++|+++.++++.++.. ....+++|++|++++++++++    +|++
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGV   84 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            34566789999999999999999999999999999999998887766543 477899999999999888765    4899


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||+....++.+.+.++ |++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+.++...|++||+|+
T Consensus        85 D~lv~nAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~  162 (248)
T 3op4_A           85 DILVNNAGITRDNLLMRMKEEE-WSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMGNAGQANYAAAKAGV  162 (248)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCCCChHHHHHHHHH
Confidence            9999999998877888888888 999999999999999999999998877 79999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++|+++++.|++++||+||+|+||+++|++.+..  .++.........|++|+++|+|+|+++.||+|+.
T Consensus       163 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~  230 (248)
T 3op4_A          163 IGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPE  230 (248)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCc
Confidence            9999999999999999999999999999997653  2233344556789999999999999999999874

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=4.6e-46  Score=300.97  Aligned_cols=223  Identities=33%  Similarity=0.469  Sum_probs=198.3

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh-----CCCceEEEeecCCHHHHHHHHHh----c
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA-----FPNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      ..+.++++||||++|||+++|++|+++|++|++++|+.+.++++.++     ..++.++++|++|++++++++++    +
T Consensus        17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   96 (266)
T 4egf_A           17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF   96 (266)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            45667899999999999999999999999999999999887665443     35688999999999998887755    4


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      |++|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++..|+||++||..+..+.++...|++||
T Consensus        97 g~id~lv~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  175 (266)
T 4egf_A           97 GGLDVLVNNAGISHPQPVVDTDPQL-FDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSK  175 (266)
T ss_dssp             TSCSEEEEECCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHH
Confidence            8999999999998878888888888 999999999999999999999998876468999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+++|+++++.|++++||+||+|+||+++|++....+..++....+....|++|+++|+|+|++++||+|+.
T Consensus       176 ~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~  248 (266)
T 4egf_A          176 AGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDA  248 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999997655444444555667789999999999999999999974

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=1.1e-45  Score=297.57  Aligned_cols=220  Identities=24%  Similarity=0.277  Sum_probs=196.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEe-cCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIAL-SKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      +.++++||||++|||++++++|+++|++|+++ +|+.+.++++.++    ..++.++++|++|+++++++++++    |+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999986 8998876665443    346889999999999998887654    89


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||++
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (258)
T 3oid_A           83 LDVFVNNAASGVLRPVMELEETH-WDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRYLENYTTVGVSKAA  160 (258)
T ss_dssp             CCEEEECCCCCCCSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSBCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCCCCCcHHHHHHHHH
Confidence            99999999988777888888888 999999999999999999999998877 7899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+++++.|++++||+||+|+||+++|++.......++.........|++|+++|+|+|++++||+|+.
T Consensus       161 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~  231 (258)
T 3oid_A          161 LEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSK  231 (258)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSST
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999998765433344455567789999999999999999999974

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-45  Score=296.43  Aligned_cols=220  Identities=26%  Similarity=0.318  Sum_probs=195.5

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeecCCHHHHHHHHHh----c
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      ..+.++++||||++|||+++|++|+++|++|++++|+.++++++.++.     .++.++++|++|++++++++++    +
T Consensus         7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   86 (262)
T 3pk0_A            7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF   86 (262)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            345678999999999999999999999999999999998877654433     4688999999999999887754    4


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-ccCCCCchhhHH
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-TALEGHTIYSAS  158 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~~y~~s  158 (238)
                      |++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+. .+.++...|++|
T Consensus        87 g~id~lvnnAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~Y~as  164 (262)
T 3pk0_A           87 GGIDVVCANAGVFPDAPLATMTPEQ-LNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITGYPGWSHYGAT  164 (262)
T ss_dssp             SCCSEEEECCCCCCCCCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCCCChhhHHH
Confidence            8999999999998888888888888 999999999999999999999998877 7899999999986 678889999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++|+++++.|++++||+||+|+||+++|++....  .++....+....|++|+++|+|+|+++.||+|+.
T Consensus       165 K~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~  236 (262)
T 3pk0_A          165 KAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAAFLATKE  236 (262)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999987542  3344455667789999999999999999999974

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.7e-45  Score=296.13  Aligned_cols=222  Identities=25%  Similarity=0.358  Sum_probs=195.8

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----   78 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----   78 (238)
                      ....+.++++||||++|||+++|++|+++|++|++++|+.+.++++.++    ..++.++++|++|++++++++++    
T Consensus         7 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   86 (256)
T 3gaf_A            7 PFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQ   86 (256)
T ss_dssp             TTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3445678999999999999999999999999999999999877665443    45788999999999998887765    


Q ss_pred             cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHH
Q psy14567         79 VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      +|++|++|||||+....++ +.+.++ |++++++|+.+++.++++++|+|.+++ .|+||++||..+..+.++...|++|
T Consensus        87 ~g~id~lv~nAg~~~~~~~-~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  163 (256)
T 3gaf_A           87 FGKITVLVNNAGGGGPKPF-DMPMSD-FEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENTNVRMASYGSS  163 (256)
T ss_dssp             HSCCCEEEECCCCCCCCCT-TCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCC-CCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCCCCCchHHHHH
Confidence            4899999999999877666 778887 999999999999999999999998877 7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++|+++++.|++++||+||+|+||+++|++..... .++....+....|++|+++|+|+|++++||+|+.
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~  236 (256)
T 3gaf_A          164 KAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL-TPEIERAMLKHTPLGRLGEAQDIANAALFLCSPA  236 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence            999999999999999999999999999999999875432 2334445567789999999999999999999874

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.1e-45  Score=299.54  Aligned_cols=222  Identities=23%  Similarity=0.297  Sum_probs=197.3

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      ..+.++++||||++|||+++|++|+++|++|++++|+.+.++++.++    ..++.++++|++|++++++++++    +|
T Consensus        23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  102 (271)
T 4ibo_A           23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI  102 (271)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            34567899999999999999999999999999999999877665443    45788999999999999888765    48


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+
T Consensus       103 ~iD~lv~nAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~asKa  180 (271)
T 4ibo_A          103 DVDILVNNAGIQFRKPMIELETAD-WQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELARATVAPYTVAKG  180 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCchhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCCCCCchhHHHHHH
Confidence            999999999998878888888888 999999999999999999999998877 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++|+++++.|++++||+||+|+||+++|++.+.....++.........|++|+++|+|+|++++||+|+.
T Consensus       181 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~  252 (271)
T 4ibo_A          181 GIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASA  252 (271)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999997653333344445567789999999999999999999974

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=6.8e-46  Score=299.84  Aligned_cols=221  Identities=21%  Similarity=0.279  Sum_probs=191.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CC--CceEEEeecCCHHHHHHHHHhc----
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FP--NVQTVQVDLQDWARTRAAVSKV----   79 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~~----   79 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+.++++.++    .+  ++.++++|++|+++++++++++    
T Consensus         6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999999999877665443    22  3888999999999998887654    


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      |++|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+.++...|++||
T Consensus        86 g~id~lvnnAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  163 (265)
T 3lf2_A           86 GCASILVNNAGQGRVSTFAETTDEA-WSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQPEPHMVATSAAR  163 (265)
T ss_dssp             CSCSEEEECCCCCCCBCTTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHH-HHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCCCCCCchhhHHHH
Confidence            8999999999998888888888888 999999999999999999999998876 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC--------CccCCcc--cCCCCCCcCCCCCccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP--------AKAGPML--AKTPLGRFAGKLKPKPWNRWLL  229 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~--------~~~~~~~--~~~~~~r~~~~~~ia~~~~~l~  229 (238)
                      +++++|+++++.|++++||+||+|+||+++|++........        +......  ...|++|+++|+|+|++++||+
T Consensus       164 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~  243 (265)
T 3lf2_A          164 AGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLA  243 (265)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999865422111        0111111  1279999999999999999999


Q ss_pred             ccc
Q psy14567        230 PSV  232 (238)
Q Consensus       230 s~~  232 (238)
                      |+.
T Consensus       244 s~~  246 (265)
T 3lf2_A          244 SPL  246 (265)
T ss_dssp             SGG
T ss_pred             Cch
Confidence            974

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.3e-44  Score=291.14  Aligned_cols=222  Identities=23%  Similarity=0.353  Sum_probs=193.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+.++++.++.    .++.++++|++|+++++++++++    |+
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35578899999999999999999999999999999999887766553    35888999999999998887654    89


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|+|.+++..|+||++||..+..+.++...|++||++
T Consensus        84 id~lv~nAg~~~~~~~~~~~~~~-~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  162 (257)
T 3imf_A           84 IDILINNAAGNFICPAEDLSVNG-WNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAG  162 (257)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHH
Confidence            99999999988777888888888 99999999999999999999999655447899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhC-CCCeEEEEEeCCceecCcccCC-CCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELG-PYNIRVNSVQPTVVMTQMGRTG-WSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~-~~~i~v~~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+++++.|++ ++|||||+|+||+++|++.... +..++..+......|++|+++|+|+|++++||+|+.
T Consensus       163 ~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  235 (257)
T 3imf_A          163 VLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDE  235 (257)
T ss_dssp             HHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            9999999999997 7799999999999999976432 223444555667789999999999999999999974

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.1e-44  Score=293.74  Aligned_cols=227  Identities=17%  Similarity=0.147  Sum_probs=178.0

Q ss_pred             eeeeeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh---
Q psy14567          3 IFAKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK---   78 (238)
Q Consensus         3 ~~~~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~---   78 (238)
                      ++.++.....++++||||++|||+++|++|+++|++|++++|+.+.++++.++. .++.++++|++|++++++++++   
T Consensus        19 ~~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   98 (272)
T 4dyv_A           19 YFQSMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVE   98 (272)
T ss_dssp             ---------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ehhhhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHH
Confidence            345566667789999999999999999999999999999999999888876655 4688999999999999888764   


Q ss_pred             -cCCccEEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CceEEEEccccccccCCCCchh
Q psy14567         79 -VGPVDVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI-QGSIVNVSSIAGKTALEGHTIY  155 (238)
Q Consensus        79 -~g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~y  155 (238)
                       +|++|++|||||+... .++.+.+.++ |++.+++|+.+++.++++++|.|.+++. .|+||++||..+..+.++...|
T Consensus        99 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y  177 (272)
T 4dyv_A           99 KFGRVDVLFNNAGTGAPAIPMEDLTFAQ-WKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPY  177 (272)
T ss_dssp             HHSCCCEEEECCCCCCCSSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHH
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHH-HHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHH
Confidence             4899999999998754 5677888888 9999999999999999999999987642 5899999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      ++||+++++|+++++.|++++||+||+|+||+++|+|.+.....   ........|.+|+.+|+|+|++++||+|++.
T Consensus       178 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~  252 (272)
T 4dyv_A          178 TATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG---VPQADLSIKVEPVMDVAHVASAVVYMASLPL  252 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------CHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc---chhhhhcccccCCCCHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999999999997653221   1222345688999999999999999999754

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=1.1e-44  Score=290.69  Aligned_cols=221  Identities=19%  Similarity=0.157  Sum_probs=177.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc---CCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV---GPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~---g~id   83 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.++++++.++    ..++.++++|++|+++++++++++   |++|
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            567889999999999999999999999999999999876665444    456889999999999998888655   8999


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+|++
T Consensus        86 ~lv~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  163 (252)
T 3h7a_A           86 VTIFNVGANVNFPILETTDRV-FRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRGGSGFAAFASAKFGLR  163 (252)
T ss_dssp             EEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCCCCCCccHHHHHHHHH
Confidence            999999998877888888888 999999999999999999999998877 799999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEE-EEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccccccc
Q psy14567        164 SITRTMALELGPYNIRV-NSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLNW  236 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v-~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~~~  236 (238)
                      +|+++++.|++++||+| |+|+||+++|+|.+...  ++.........|.+ +.+|+|+|++++||+++....|
T Consensus       164 ~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~~~~  234 (252)
T 3h7a_A          164 AVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR--EQMFGKDALANPDL-LMPPAAVAGAYWQLYQQPKSAW  234 (252)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEEC------------------------------CCHHHHHHHHHHHHHCCGGGB
T ss_pred             HHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc--hhhhhhhhhcCCcc-CCCHHHHHHHHHHHHhCchhcc
Confidence            99999999999999999 99999999999986542  23334455566777 9999999999999999866555

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=5.1e-45  Score=291.84  Aligned_cols=220  Identities=20%  Similarity=0.274  Sum_probs=193.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhc----CCccE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV----GPVDV   84 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~----g~id~   84 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+.++++.++. .++.++++|++|+++++++++++    |++|+
T Consensus         4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            45678999999999999999999999999999999999888776554 46888999999999998887654    89999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||||+....++.+.+.++ |++++++|+.+++.++++++|+|.+++..|+||++||..+..+.++...|++||+++++
T Consensus        84 lv~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  162 (247)
T 3rwb_A           84 LVNNASIVPFVAWDDVDLDH-WRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIG  162 (247)
T ss_dssp             EEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHH
Confidence            99999998877888888888 99999999999999999999999887646899999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccC-CCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAK-TPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++.|++++||+||+|+||+++|++.....  ++........ .|++|+++|+|+|+++.||+|+.
T Consensus       163 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~  229 (247)
T 3rwb_A          163 FTRALATELGKYNITANAVTPGLIESDGVKASP--HNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDD  229 (247)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSG--GGGGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCcCcCccccccC--hhHHHHHHhcccccCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999876421  1222222233 78999999999999999999985

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=5.7e-45  Score=294.50  Aligned_cols=222  Identities=21%  Similarity=0.327  Sum_probs=187.6

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      +...+.++++||||++|||+++|++|+++|++|++++|+.++++++.++. .++.++++|++|+++++++++++    |+
T Consensus        22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (266)
T 3grp_A           22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEG  101 (266)
T ss_dssp             TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTS
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            34456678999999999999999999999999999999999888776554 46889999999999998887654    89


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+|
T Consensus       102 iD~lvnnAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asKaa  179 (266)
T 3grp_A          102 IDILVNNAGITRDGLFVRMQDQD-WDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGNPGQTNYCAAKAG  179 (266)
T ss_dssp             CCEEEECCCCC-----CCCHHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC-------CHHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCCCCchhHHHHHHH
Confidence            99999999998777778888887 999999999999999999999998877 7999999999999998999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+++++.|++++||+||+|+||+++|++....  .++..+.+....|++|+++|+|+|++++||+|+.
T Consensus       180 ~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~  248 (266)
T 3grp_A          180 LIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDE  248 (266)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999987653  2333445566789999999999999999999974

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1e-44  Score=294.02  Aligned_cols=222  Identities=24%  Similarity=0.282  Sum_probs=193.6

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh---HHHHHhhCCCceEEEeecCCHHHHHHHHH---hcCCc
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN---LDSLKQAFPNVQTVQVDLQDWARTRAAVS---KVGPV   82 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~D~~~~~~v~~~~~---~~g~i   82 (238)
                      ..+.++++||||++|||+++|++|+++|++|++++|++..   .+++.+...++.++++|++|+++++++.+   ++|++
T Consensus        28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~i  107 (273)
T 3uf0_A           28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRV  107 (273)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence            3467789999999999999999999999999999977532   22333334568899999999999887754   34899


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+|+
T Consensus       108 D~lv~nAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaa~  185 (273)
T 3uf0_A          108 DVLVNNAGIIARAPAEEVSLGR-WREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGGRNVAAYAASKHAV  185 (273)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSCHHHHHHHHHH
T ss_pred             cEEEECCCCCCCCCchhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCCCCCChhHHHHHHHH
Confidence            9999999998878888888888 999999999999999999999998877 79999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++|+++++.|++++||+||+|+||+++|++.......++....+....|++|+++|+|+|++++||+|+.
T Consensus       186 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~  255 (273)
T 3uf0_A          186 VGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDA  255 (273)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999987654333444455567789999999999999999999974

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=1.4e-44  Score=291.23  Aligned_cols=223  Identities=24%  Similarity=0.295  Sum_probs=195.5

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      ..+.++++||||++|||+++|++|+++|++|++++|+.+.++++.++. ....++++|++|++++++++++    +|++|
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            345678999999999999999999999999999999999888776654 4688899999999998877754    58999


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||+....++.+.+.++ |++.+++|+.++++++++++|.|.+++.+|+||++||..+..+.++...|++||++++
T Consensus        85 ~lv~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  163 (259)
T 4e6p_A           85 ILVNNAALFDLAPIVEITRES-YEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVI  163 (259)
T ss_dssp             EEEECCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHH
Confidence            999999998877888888888 9999999999999999999999988754689999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCC---------CCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTG---------WSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+++++.|++++||+||+|+||+++|++....         ...++.........|++|+++|+|+|++++||+|+.
T Consensus       164 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~  241 (259)
T 4e6p_A          164 SLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAE  241 (259)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGG
T ss_pred             HHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCc
Confidence            999999999999999999999999999986432         012233334456789999999999999999999874

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.4e-44  Score=293.88  Aligned_cols=221  Identities=25%  Similarity=0.302  Sum_probs=194.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhc----CCccE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV----GPVDV   84 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~----g~id~   84 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+.++++.++. ..+.++++|++|+++++++++++    |++|+
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35678999999999999999999999999999999999888776654 46888999999999998887654    89999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+|+++
T Consensus       105 lv~nAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  182 (277)
T 4dqx_A          105 LVNNAGFGTTGNVVTIPEET-WDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSAIADRTAYVASKGAISS  182 (277)
T ss_dssp             EEECCCCCCCBCTTTSCHHH-HHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcCCCCChhHHHHHHHHHH
Confidence            99999998878888888888 999999999999999999999998876 7899999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCC-CCC---CccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW-SDP---AKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~-~~~---~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++.|++++||+||+|+||+++|++..... ...   +....+....|++|+++|+|+|++++||+|+.
T Consensus       183 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~  254 (277)
T 4dqx_A          183 LTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDR  254 (277)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCc
Confidence            999999999999999999999999999843211 111   11222556789999999999999999999975

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.4e-44  Score=293.84  Aligned_cols=221  Identities=25%  Similarity=0.320  Sum_probs=192.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+.++++.++. ..+.++++|++|++++++++++    +|++|+
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35678999999999999999999999999999999999888776654 4688999999999999887765    489999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+++++
T Consensus       107 lvnnAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~  184 (277)
T 3gvc_A          107 LVANAGVVHLASLIDTTVED-FDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQ  184 (277)
T ss_dssp             EEECCCCCCCBCTTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCchhHHHHHHHHHH
Confidence            99999998878888888888 999999999999999999999998877 7999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC--CCCccCCccc---CCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS--DPAKAGPMLA---KTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~~---~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++.|++++||+||+|+||+++|++.+....  ..........   ..|++|+++|+|+|++++||+|+.
T Consensus       185 l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~  257 (277)
T 3gvc_A          185 LSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDD  257 (277)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCc
Confidence            9999999999999999999999999998654211  1122222233   568899999999999999999974

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.4e-44  Score=295.83  Aligned_cols=220  Identities=24%  Similarity=0.310  Sum_probs=195.3

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeecCCHHHHHHHHHh----c
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      ..+.++++||||++|||+++|++|+++|++|++++|+.++++++.+++     .++.++++|++|++++++++++    +
T Consensus        38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  117 (293)
T 3rih_A           38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF  117 (293)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence            345678999999999999999999999999999999998877665543     3688899999999998887754    4


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-ccCCCCchhhHH
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-TALEGHTIYSAS  158 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~~y~~s  158 (238)
                      |++|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+. .+.++...|++|
T Consensus       118 g~iD~lvnnAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~~~~~~~Y~as  195 (293)
T 3rih_A          118 GALDVVCANAGIFPEARLDTMTPEQ-LSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTGYPGWSHYGAS  195 (293)
T ss_dssp             SCCCEEEECCCCCCCCCTTTCCHHH-HHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBBCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCCCCCCHHHHHH
Confidence            8999999999998888888888888 999999999999999999999998877 7899999999986 778889999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++|+++++.|++++||+||+|+||+++|++....  .++....+....|++|+++|+|+|+++.||+|+.
T Consensus       196 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~  267 (293)
T 3rih_A          196 KAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM--GEEYISGMARSIPMGMLGSPVDIGHLAAFLATDE  267 (293)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc--cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999987543  2334445567789999999999999999999874

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.7e-45  Score=296.79  Aligned_cols=220  Identities=21%  Similarity=0.269  Sum_probs=193.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----C---CceEEEeecCCHHHHHHHHHhc----
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----P---NVQTVQVDLQDWARTRAAVSKV----   79 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~---~~~~~~~D~~~~~~v~~~~~~~----   79 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.+.+++..++.    .   .+.++++|++|+++++++++++    
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            5678899999999999999999999999999999998776654433    2   5788999999999998887654    


Q ss_pred             CCccEEEEccCC-CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHH
Q psy14567         80 GPVDVLINNAAV-ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        80 g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      |++|++|||||+ ....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++|
T Consensus        90 g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  167 (281)
T 3svt_A           90 GRLHGVVHCAGGSENIGPITQVDSEA-WRRTVDLNVNGTMYVLKHAAREMVRGG-GGSFVGISSIAASNTHRWFGAYGVT  167 (281)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCTTCTHHHHH
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCHHHcCCCCCChhHHHH
Confidence            899999999998 4556777888888 999999999999999999999998877 7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++|+++++.|++++||+||+|+||+++|++.......++.........|++|+++|+|+|++++||+|+.
T Consensus       168 K~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~  241 (281)
T 3svt_A          168 KSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDA  241 (281)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999997653333444455566789999999999999999999874

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=8.3e-44  Score=289.12  Aligned_cols=220  Identities=23%  Similarity=0.331  Sum_probs=192.8

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----C
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----G   80 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g   80 (238)
                      ..+.++++||||++|||+++|++|+++|++|++++|+.+.++++.++    ..++.++++|++|+++++++++++    |
T Consensus        29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  108 (276)
T 3r1i_A           29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELG  108 (276)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            44667899999999999999999999999999999998876665443    346889999999999998887654    8


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC--CCCchhhHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL--EGHTIYSAS  158 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~~y~~s  158 (238)
                      ++|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++.+|+||++||..+..+.  ++...|++|
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~as  187 (276)
T 3r1i_A          109 GIDIAVCNAGIVSVQAMLDMPLEE-FQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTS  187 (276)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHH
Confidence            999999999998877888888888 99999999999999999999999887645899999999987653  367899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++|+++++.|++++||+||+|+||+++|++.+..   ++....+....|++|+++|+|+|++++||+|+.
T Consensus       188 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~  258 (276)
T 3r1i_A          188 KAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL---ADYHALWEPKIPLGRMGRPEELTGLYLYLASAA  258 (276)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG---GGGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc---hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999997642   233444566789999999999999999999974

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.2e-44  Score=291.43  Aligned_cols=221  Identities=22%  Similarity=0.246  Sum_probs=193.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+.++++.++.    .++.++++|++|++++++++++    +|+
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            45678899999999999999999999999999999998877766553    4688899999999999888765    489


Q ss_pred             ccEEEEccCCC-CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-ccCCCCchhhHHH
Q psy14567         82 VDVLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-TALEGHTIYSASK  159 (238)
Q Consensus        82 id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~~y~~sK  159 (238)
                      +|++|||||+. ...++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+. .+.++...|++||
T Consensus        86 iD~lvnnAg~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~asK  163 (280)
T 3tox_A           86 LDTAFNNAGALGAMGEISSLSVEG-WRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAGFAGVAPYAASK  163 (280)
T ss_dssp             CCEEEECCCCCCSCSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTBCCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcCCCCCchhHHHHH
Confidence            99999999987 346777888888 999999999999999999999998877 7899999999987 6788899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC--CCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW--SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+++|+++++.|++++||+||+|+||+++|++.....  ..++.........|++|+++|+|+|++++||+|+.
T Consensus       164 aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  238 (280)
T 3tox_A          164 AGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDG  238 (280)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999875422  12333344556789999999999999999999974

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.2e-44  Score=292.78  Aligned_cols=221  Identities=22%  Similarity=0.275  Sum_probs=191.5

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----C--CCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----F--PNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~--~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+.+++..++    .  ..+..+.+|++++++++++++++|++|
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id   87 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVD   87 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCS
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCC
Confidence            3567899999999999999999999999999999999876655433    2  246788999999999999999999999


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||++++
T Consensus        88 ~lv~nAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  165 (267)
T 3t4x_A           88 ILINNLGIFEPVEYFDIPDED-WFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMPSQEMAHYSATKTMQL  165 (267)
T ss_dssp             EEEECCCCCCCCCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCccccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccCCCcchHHHHHHHHHH
Confidence            999999998877888888888 999999999999999999999998876 689999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCC----CCC-----CCc----cCCcccCCCCCCcCCCCCcccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTG----WSD-----PAK----AGPMLAKTPLGRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~----~~~-----~~~----~~~~~~~~~~~r~~~~~~ia~~~~~l~s  230 (238)
                      +|+++++.|++++||+||+|+||+++|++....    ...     ++.    ........|++|+++|+|+|++++||+|
T Consensus       166 ~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s  245 (267)
T 3t4x_A          166 SLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVTFLSS  245 (267)
T ss_dssp             HHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHHHHHS
T ss_pred             HHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHHHHcC
Confidence            999999999999999999999999999975421    111     111    1112234689999999999999999999


Q ss_pred             cc
Q psy14567        231 SV  232 (238)
Q Consensus       231 ~~  232 (238)
                      +.
T Consensus       246 ~~  247 (267)
T 3t4x_A          246 PL  247 (267)
T ss_dssp             GG
T ss_pred             cc
Confidence            74

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.4e-44  Score=292.75  Aligned_cols=219  Identities=26%  Similarity=0.395  Sum_probs=194.5

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+.++++.++    ...+.++.+|++|++++++++++    +|+
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            4567899999999999999999999999999999999877665443    34688999999999999887765    489


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+|
T Consensus       106 iD~lvnnAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa  183 (270)
T 3ftp_A          106 LNVLVNNAGITQDQLAMRMKDDE-WDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGNPGQVNYAAAKAG  183 (270)
T ss_dssp             CCEEEECCCCCCCBCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCCCchhHHHHHHH
Confidence            99999999998877888888888 999999999999999999999998877 7999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+++++.|++++||+||+|+||+++|++....  .++.........|++|+++|+|+|++++||+|+.
T Consensus       184 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  252 (270)
T 3ftp_A          184 VAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL--PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQ  252 (270)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999999987653  2233344556789999999999999999999874

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=4.8e-44  Score=286.00  Aligned_cols=217  Identities=25%  Similarity=0.381  Sum_probs=190.9

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHH----hhCCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLK----QAFPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~----~~~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      .++++||||++|||+++|++|+++|++|++++| +.+..+++.    +...++.++++|++|++++++++++    +|++
T Consensus         4 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (246)
T 3osu_A            4 TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSL   83 (246)
T ss_dssp             SCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            468899999999999999999999999988876 445555443    3345688999999999999887765    4899


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+++
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  161 (246)
T 3osu_A           84 DVLVNNAGITRDNLLMRMKEQE-WDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGNPGQANYVATKAGV  161 (246)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCCCChHHHHHHHHH
Confidence            9999999998877888888888 999999999999999999999998877 78999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++.|++++||++|+|+||+++|++....  .++....+....|++|+++|+|+|+++.||+|+.
T Consensus       162 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~  229 (246)
T 3osu_A          162 IGLTKSAARELASRGITVNAVAPGFIVSDMTDAL--SDELKEQMLTQIPLARFGQDTDIANTVAFLASDK  229 (246)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHhcccCeEEEEEEECCCcCCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999997643  2334445567789999999999999999999975

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.1e-44  Score=289.65  Aligned_cols=221  Identities=23%  Similarity=0.262  Sum_probs=184.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHHhh-----CCCceEEEeecCCHHHHHHHHHh----c
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLKQA-----FPNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      ...++++||||++|||+++|++|+++|++|++++| +.+.++++.++     ...+.++++|++|++++++++++    +
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            45578999999999999999999999999999999 55555554433     24688899999999999888765    4


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      |++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||
T Consensus       103 g~iD~lv~nAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  180 (281)
T 3v2h_A          103 GGADILVNNAGVQFVEKIEDFPVEQ-WDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVASPFKSAYVAAK  180 (281)
T ss_dssp             SSCSEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCCCCchHHHHHH
Confidence            8999999999998877888888888 999999999999999999999998877 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC---------C-ccCCcccCCCCCCcCCCCCccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP---------A-KAGPMLAKTPLGRFAGKLKPKPWNRWLL  229 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~---------~-~~~~~~~~~~~~r~~~~~~ia~~~~~l~  229 (238)
                      +++++|+++++.|++++||+||+|+||+++|++........         + ....+....|++|+++|+|+|++++||+
T Consensus       181 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~  260 (281)
T 3v2h_A          181 HGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLA  260 (281)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHc
Confidence            99999999999999999999999999999999876432211         1 1223556789999999999999999999


Q ss_pred             ccc
Q psy14567        230 PSV  232 (238)
Q Consensus       230 s~~  232 (238)
                      |+.
T Consensus       261 s~~  263 (281)
T 3v2h_A          261 GDD  263 (281)
T ss_dssp             SSG
T ss_pred             CCC
Confidence            975

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=3.4e-44  Score=290.45  Aligned_cols=216  Identities=27%  Similarity=0.366  Sum_probs=190.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHHh----hCCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      .+.++++||||++|||+++|++|+++|++|++++| +.+..+++.+    ....+.++++|++|++++++++++    +|
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35678999999999999999999999999999888 5555554433    345688999999999999888765    48


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+
T Consensus       106 ~id~lv~nAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~  183 (269)
T 4dmm_A          106 RLDVLVNNAGITRDTLLLRMKRDD-WQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGNPGQANYSAAKA  183 (269)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCCCchhHHHHHH
Confidence            999999999998877788888888 999999999999999999999998877 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++|+++++.|++++||+||+|+||+++|+|.....     ........|++|+++|+|+|++++||+|++
T Consensus       184 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-----~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~  250 (269)
T 4dmm_A          184 GVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELA-----AEKLLEVIPLGRYGEAAEVAGVVRFLAADP  250 (269)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHH-----HHHHGGGCTTSSCBCHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccccc-----HHHHHhcCCCCCCCCHHHHHHHHHHHhCCc
Confidence            9999999999999999999999999999999865421     133456789999999999999999999984

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1.2e-44  Score=294.50  Aligned_cols=220  Identities=24%  Similarity=0.329  Sum_probs=191.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.+.++++.++    ..++.++++|++|++++++++++    +|++
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  102 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI  102 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999999877665443    35688999999999999887765    4899


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHH--HHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSK--TMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      |++|||||+....++.+.+.++ |++.+++|+.+++.++++++|  .|.+++ .|+||++||..+..+.++...|++||+
T Consensus       103 d~lv~nAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~asKa  180 (279)
T 3sju_A          103 GILVNSAGRNGGGETADLDDAL-WADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQGVMYAAPYTASKH  180 (279)
T ss_dssp             CEEEECCCCCCCSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             cEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccCCCCChhHHHHHH
Confidence            9999999998877888888888 999999999999999999999  576666 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC---------CCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW---------SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      |+++|+++++.|++++||+||+|+||+++|+|.....         ..++....+....|++|+++|+|+|++++||+|+
T Consensus       181 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  260 (279)
T 3sju_A          181 GVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTD  260 (279)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999865311         1123334455678999999999999999999997


Q ss_pred             c
Q psy14567        232 V  232 (238)
Q Consensus       232 ~  232 (238)
                      .
T Consensus       261 ~  261 (279)
T 3sju_A          261 A  261 (279)
T ss_dssp             G
T ss_pred             c
Confidence            4

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=1.1e-44  Score=292.79  Aligned_cols=219  Identities=24%  Similarity=0.322  Sum_probs=191.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~li   86 (238)
                      ..++++||||+||||+++|++|+++|++|++++|+.++++++..  ..+.++++|++|++++++++++    +|++|++|
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNL--PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCC--TTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhc--CCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            45789999999999999999999999999999999988765543  2678899999999999887765    48999999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+++++|+
T Consensus        93 nnAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~  170 (266)
T 3p19_A           93 NNAGMMLLGQIDTQEANE-WQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKTFPDHAAYCGTKFAVHAIS  170 (266)
T ss_dssp             ECCCCCCCCCTTTSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCCCCCCchHHHHHHHHHHHH
Confidence            999998878888888888 999999999999999999999998877 799999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcc-cCCCCCCcCCCCCcccccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPML-AKTPLGRFAGKLKPKPWNRWLLPSVGL  234 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~ia~~~~~l~s~~~~  234 (238)
                      ++++.|++++||+||+|+||+++|++....... +...... ...|++|+++|+|+|++++||+++...
T Consensus       171 ~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~  238 (266)
T 3p19_A          171 ENVREEVAASNVRVMTIAPSAVKTELLSHTTSQ-QIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQN  238 (266)
T ss_dssp             HHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCH-HHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHhcccCcEEEEEeeCccccchhhcccch-hhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCC
Confidence            999999999999999999999999997653221 1111111 134889999999999999999998654

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=5.1e-44  Score=289.72  Aligned_cols=220  Identities=21%  Similarity=0.238  Sum_probs=192.9

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+.+++..++. .++.++++|++|++++++++++    +|++|+
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B            9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35678999999999999999999999999999999998887766554 4688999999999999888764    489999


Q ss_pred             EEEccCCCC--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         85 LINNAAVAR--FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        85 li~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      +|||||+..  ..++.+.+.++ |++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+.++...|++||+++
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~  166 (271)
T 3tzq_B           89 VDNNAAHSDPADMLVTQMTVDV-WDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAAYDMSTAYACTKAAI  166 (271)
T ss_dssp             EEECCCCCCTTCCCGGGCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSBCSSCHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCccccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCCCCCChHHHHHHHHH
Confidence            999999873  34556777887 999999999999999999999998877 79999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++|+++++.|++++||+||+|+||+++|++..... .++....+....|++|+++|+|+|++++||+|+.
T Consensus       167 ~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~  235 (271)
T 3tzq_B          167 ETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPHEIAELVCFLASDR  235 (271)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999876432 2334445567789999999999999999999974

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=9.3e-44  Score=282.46  Aligned_cols=212  Identities=15%  Similarity=0.174  Sum_probs=177.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHhc----CCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV----GPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~----g~id~l   85 (238)
                      ++++++||||++|||++++++|+++|++|++++|+.++++++.++.+ .+.++++|++|+++++++++++    |++|++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            35789999999999999999999999999999999998887766543 4888999999999998887654    899999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++  ++||++||..+..+.++...|++||+++++|
T Consensus        82 vnnAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  158 (235)
T 3l6e_A           82 LHCAGTGEFGPVGVYTAEQ-IRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAAQVGKANESLYCASKWGMRGF  158 (235)
T ss_dssp             EEECCCC------CCCHHH-HHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEECCSSCSSHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChHhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHhcCCCCCCcHHHHHHHHHHHH
Confidence            9999998777888888888 999999999999999999999997764  5999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLNW  236 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~~~  236 (238)
                      +++++.|++++||++|+|+||+++|++......           .+.+|+.+|+|+|+.++|++++....|
T Consensus       159 ~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----------~~~~~~~~pedvA~~v~~l~~~~~~~~  218 (235)
T 3l6e_A          159 LESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----------VDPSGFMTPEDAAAYMLDALEARSSCH  218 (235)
T ss_dssp             HHHHHHHTTTSSEEEEEEEEEEECCCC----------------------CBCHHHHHHHHHHHTCCCSSEE
T ss_pred             HHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----------CCCcCCCCHHHHHHHHHHHHhCCCCcc
Confidence            999999999999999999999999998654211           244689999999999999999755433

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.3e-43  Score=288.18  Aligned_cols=221  Identities=28%  Similarity=0.321  Sum_probs=190.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-------------ChHhHHHHH----hhCCCceEEEeecCCHHHH
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-------------TQANLDSLK----QAFPNVQTVQVDLQDWART   72 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-------------~~~~~~~~~----~~~~~~~~~~~D~~~~~~v   72 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|             +.+.+++..    .....+.++++|++|++++
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            35678999999999999999999999999999988             555554443    3345688999999999999


Q ss_pred             HHHHHh----cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc
Q psy14567         73 RAAVSK----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA  148 (238)
Q Consensus        73 ~~~~~~----~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  148 (238)
                      ++++++    +|++|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++..|+||++||..+..+
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  167 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPED-FRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKM  167 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHH-HHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCC
Confidence            888765    48999999999998877888888888 9999999999999999999999988754689999999999999


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCC---------CCCCCccCCcccCCCCCCcCCCC
Q psy14567        149 LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG---------WSDPAKAGPMLAKTPLGRFAGKL  219 (238)
Q Consensus       149 ~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~r~~~~~  219 (238)
                      .++...|++||+++++|+++++.|++++||+||+|+||+++|+|....         ...++.........|. |+++|+
T Consensus       168 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-r~~~pe  246 (277)
T 3tsc_A          168 QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-WVAEPE  246 (277)
T ss_dssp             CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-SCBCHH
T ss_pred             CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC-CCCCHH
Confidence            999999999999999999999999999999999999999999986431         0123344445556676 899999


Q ss_pred             Ccccccccccccc
Q psy14567        220 KPKPWNRWLLPSV  232 (238)
Q Consensus       220 ~ia~~~~~l~s~~  232 (238)
                      |+|++++||+|+.
T Consensus       247 dvA~~v~~L~s~~  259 (277)
T 3tsc_A          247 DIADTVCWLASDE  259 (277)
T ss_dssp             HHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhCcc
Confidence            9999999999975

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=1.4e-44  Score=290.48  Aligned_cols=219  Identities=26%  Similarity=0.299  Sum_probs=192.1

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      ..+.++++||||++|||+++|++|+++|++|++++|+++.++++.++. .++.++++|++|++++++++++    +|++|
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID   84 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            345678899999999999999999999999999999999988877654 4688999999999999887754    48999


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|++   +|+||++||..+..+.++...|++||++++
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  160 (255)
T 4eso_A           85 LLHINAGVSELEPFDQVSEAS-YDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSVADEGGHPGMSVYSASKAALV  160 (255)
T ss_dssp             EEEECCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCGGGSSBCTTBHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHhc---CCEEEEECChhhcCCCCCchHHHHHHHHHH
Confidence            999999998878888888888 9999999999999999999998864   479999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC----CccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP----AKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +|+++++.|++++||+||+|+||+++|++.......+    +.........|++|+++|+|+|++++||+|+
T Consensus       161 ~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  232 (255)
T 4eso_A          161 SFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE  232 (255)
T ss_dssp             HHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999875422111    1122334568999999999999999999986

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=9.7e-44  Score=284.87  Aligned_cols=214  Identities=23%  Similarity=0.281  Sum_probs=181.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-------CCceEEEeecCCHHHHHHHHHh----
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAAVSK----   78 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~----   78 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.++++++.++.       ..+.++++|++|++++++++++    
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999999999998877665532       5688999999999999888765    


Q ss_pred             cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHH
Q psy14567         79 VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      +|++|++|||||+....++ +.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++|
T Consensus        85 ~g~iD~lvnnAg~~~~~~~-~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  161 (250)
T 3nyw_A           85 YGAVDILVNAAAMFMDGSL-SEPVDN-FRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGFADGGIYGST  161 (250)
T ss_dssp             HCCEEEEEECCCCCCCCCC-SCHHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC-------CCTTHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCC-CCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCCCCCcchHHH
Confidence            4899999999999876666 666777 999999999999999999999998877 7999999999998877778999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLNW  236 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~~~  236 (238)
                      |+++++|+++++.|++++||+||+|+||+++|+|.....          ...|.+|+.+|+|+|++++||+|+....|
T Consensus       162 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----------~~~~~~~~~~p~dva~~v~~l~s~~~~~~  229 (250)
T 3nyw_A          162 KFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG----------TPFKDEEMIQPDDLLNTIRCLLNLSENVC  229 (250)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT----------CCSCGGGSBCHHHHHHHHHHHHTSCTTEE
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC----------CCcccccCCCHHHHHHHHHHHHcCCCceE
Confidence            999999999999999999999999999999999875432          12467889999999999999999865433

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=3e-44  Score=291.95  Aligned_cols=221  Identities=24%  Similarity=0.292  Sum_probs=193.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh-----CCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA-----FPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.++.++..++     ..++.++++|++|++++++++++    +|
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3567899999999999999999999999999999998876655433     34688999999999999887765    48


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+
T Consensus       105 ~id~lv~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  182 (277)
T 4fc7_A          105 RIDILINCAAGNFLCPAGALSFNA-FKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQALQVHAGSAKA  182 (277)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTCTTCHHHHHHHH
T ss_pred             CCCEEEECCcCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCCCcHHHHHHHH
Confidence            999999999988777888888888 999999999999999999999998776 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC-CCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW-SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++|+++++.|++++||+||+|+||+++|++..... ..++.........|++|+++|+|+|++++||+|+.
T Consensus       183 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~  255 (277)
T 4fc7_A          183 AVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPL  255 (277)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCc
Confidence            9999999999999999999999999999998643211 12333445566789999999999999999999974

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.9e-44  Score=289.40  Aligned_cols=219  Identities=21%  Similarity=0.271  Sum_probs=192.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.++++++.++    ..++.++++|++|++++++++++    +|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   89 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRV   89 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999999999887665443    35688999999999999887765    4899


Q ss_pred             cEEEEccCCC-CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         83 DVLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        83 d~li~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      |++|||||+. ...++.+.+.++ |++.+++|+.+++.++++++|.|.+++  |+||++||..+..+.++...|++||++
T Consensus        90 d~lv~nAg~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~asKaa  166 (264)
T 3ucx_A           90 DVVINNAFRVPSMKPFANTTFEH-MRDAIELTVFGALRLIQGFTPALEESK--GAVVNVNSMVVRHSQAKYGAYKMAKSA  166 (264)
T ss_dssp             SEEEECCCSCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHTHHHHHHHT--CEEEEECCGGGGCCCTTCHHHHHHHHH
T ss_pred             cEEEECCCCCCCCCCchhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEECcchhccCCCccHHHHHHHHH
Confidence            9999999985 456777888888 999999999999999999999998764  899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC---------CCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW---------SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+++++.|++++||+||+|+||+++|++.....         ..++.........|++|+++|+|+|++++||+|+.
T Consensus       167 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~  246 (264)
T 3ucx_A          167 LLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDL  246 (264)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999865321         11233444567789999999999999999999974

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.7e-43  Score=286.79  Aligned_cols=222  Identities=30%  Similarity=0.350  Sum_probs=188.8

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-------------ChHhHHHHHhh----CCCceEEEeecCCHHH
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-------------TQANLDSLKQA----FPNVQTVQVDLQDWAR   71 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-------------~~~~~~~~~~~----~~~~~~~~~D~~~~~~   71 (238)
                      ..+.++++||||++|||+++|++|+++|++|++++|             +.++++++.++    ...+.++++|++|+++
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   91 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA   91 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            446678999999999999999999999999999988             56665554433    3568889999999999


Q ss_pred             HHHHHHh----cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc
Q psy14567         72 TRAAVSK----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT  147 (238)
Q Consensus        72 v~~~~~~----~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  147 (238)
                      +++++++    +|++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|+|.+++.+|+||++||..+..
T Consensus        92 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  170 (280)
T 3pgx_A           92 LRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQ-WDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK  170 (280)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc
Confidence            9888765    48999999999998878888888888 999999999999999999999998875468999999999999


Q ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC------CCCCccCC--cccCCCCCCcCCCC
Q psy14567        148 ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW------SDPAKAGP--MLAKTPLGRFAGKL  219 (238)
Q Consensus       148 ~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~------~~~~~~~~--~~~~~~~~r~~~~~  219 (238)
                      +.++...|++||+++++|+++++.|++++||+||+|+||+++|++.....      ..+.....  .....|. |+.+|+
T Consensus       171 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~~~p~  249 (280)
T 3pgx_A          171 ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-GFMTAD  249 (280)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-SCBCHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC-CCCCHH
Confidence            99999999999999999999999999999999999999999999864310      01111111  3344566 799999


Q ss_pred             Ccccccccccccc
Q psy14567        220 KPKPWNRWLLPSV  232 (238)
Q Consensus       220 ~ia~~~~~l~s~~  232 (238)
                      |+|++++||+|+.
T Consensus       250 dvA~~v~~L~s~~  262 (280)
T 3pgx_A          250 EVADVVAWLAGDG  262 (280)
T ss_dssp             HHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhCcc
Confidence            9999999999874

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=7.9e-44  Score=287.26  Aligned_cols=224  Identities=16%  Similarity=0.134  Sum_probs=180.8

Q ss_pred             eeeeeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC---hHhHHHHHhh----CCCceEEEeecCCHHHHHHH
Q psy14567          3 IFAKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT---QANLDSLKQA----FPNVQTVQVDLQDWARTRAA   75 (238)
Q Consensus         3 ~~~~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~   75 (238)
                      ++.++...+.++++||||++|||+++|++|+++|++|++++|+   .+.++++.++    ..++.++++|++|+++++++
T Consensus         2 ~~~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~   81 (262)
T 3ksu_A            2 SLTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKL   81 (262)
T ss_dssp             --CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHH
T ss_pred             CCccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            3445566677899999999999999999999999999998765   3344444333    34688899999999999888


Q ss_pred             HHhc----CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCC
Q psy14567         76 VSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEG  151 (238)
Q Consensus        76 ~~~~----g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~  151 (238)
                      ++++    |++|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+   .|+||++||..+..+.++
T Consensus        82 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~~~~  157 (262)
T 3ksu_A           82 FDFAEKEFGKVDIAINTVGKVLKKPIVETSEAE-FDAMDTINNKVAYFFIKQAAKHMNP---NGHIITIATSLLAAYTGF  157 (262)
T ss_dssp             HHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHH-HHHHHHHHHHHHHHHHHHHHTTEEE---EEEEEEECCCHHHHHHCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHhhcC---CCEEEEEechhhccCCCC
Confidence            8654    8999999999998878888888888 9999999999999999999999832   589999999999888888


Q ss_pred             CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        152 HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       152 ~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ...|++||+|+++|+++++.|++++||+||+|+||+++|++..... .++.........|++|+++|+|+|++++||+|+
T Consensus       158 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~  236 (262)
T 3ksu_A          158 YSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE-TKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD  236 (262)
T ss_dssp             CCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-------------CCCCSCCGGGTHHHHHHHHTT
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC-chHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999999976532 233445566678999999999999999999997

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-43  Score=289.11  Aligned_cols=220  Identities=19%  Similarity=0.149  Sum_probs=184.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CC-ceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PN-VQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.+.++++.++.    +. +.++++|++|+++++++++++    |+
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5678999999999999999999999999999999998877665443    23 488999999999998887654    89


Q ss_pred             ccEEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEEccccccccCCCCchhhHHH
Q psy14567         82 VDVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK-IQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        82 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      +|++|||||+... .++.+.+.++ |++++++|+.+++.++++++|.|.+++ ..|+||++||..+..+.++...|++||
T Consensus       112 iD~lvnnAG~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK  190 (281)
T 4dry_A          112 LDLLVNNAGSNVPPVPLEEVTFEQ-WNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATK  190 (281)
T ss_dssp             CSEEEECCCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHH
Confidence            9999999998754 5777788888 999999999999999999999998764 258999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGL  234 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~  234 (238)
                      +|+++|+++++.|++++||+||+|+||+++|+|.......   ........|.+|+.+|+|+|++++||+|++..
T Consensus       191 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~  262 (281)
T 4dry_A          191 HAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTG---VLQANGEVAAEPTIPIEHIAEAVVYMASLPLS  262 (281)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CE---EECTTSCEEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcch---hhhhhhcccccCCCCHHHHHHHHHHHhCCCcc
Confidence            9999999999999999999999999999999997653221   11223446778999999999999999998643

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=6.5e-43  Score=285.33  Aligned_cols=221  Identities=25%  Similarity=0.314  Sum_probs=187.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC----------------hHhHHHHHh----hCCCceEEEeecCCH
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT----------------QANLDSLKQ----AFPNVQTVQVDLQDW   69 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~----------------~~~~~~~~~----~~~~~~~~~~D~~~~   69 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+                .+.++++.+    ....+.++++|++|+
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            356789999999999999999999999999999887                555555433    335688999999999


Q ss_pred             HHHHHHHHh----cCCccEEEEccCCCCCCC-CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccc
Q psy14567         70 ARTRAAVSK----VGPVDVLINNAAVARFDR-FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIA  144 (238)
Q Consensus        70 ~~v~~~~~~----~g~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~  144 (238)
                      +++++++++    +|++|++|||||+..... +.+.+.++ |++++++|+.+++.++++++|+|.+++..|+||++||..
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEED-WTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG  167 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence            999888765    489999999999876554 67778887 999999999999999999999998865468999999999


Q ss_pred             ccccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCC-----C----CCCCc-----cCCcccCC
Q psy14567        145 GKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG-----W----SDPAK-----AGPMLAKT  210 (238)
Q Consensus       145 ~~~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~-----~----~~~~~-----~~~~~~~~  210 (238)
                      +..+.++...|++||+++++|+++++.|++++||+||+|+||+++|+|....     .    ..+..     ........
T Consensus       168 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (286)
T 3uve_A          168 GLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTL  247 (286)
T ss_dssp             GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSS
T ss_pred             hccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhhcc
Confidence            9999999999999999999999999999999999999999999999987531     0    00000     00144556


Q ss_pred             CCCCcCCCCCcccccccccccc
Q psy14567        211 PLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       211 ~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      | +|+++|+|+|++++||+|+.
T Consensus       248 p-~r~~~p~dvA~~v~fL~s~~  268 (286)
T 3uve_A          248 P-IPWVEPIDISNAVLFFASDE  268 (286)
T ss_dssp             S-CSCBCHHHHHHHHHHHHSGG
T ss_pred             C-CCcCCHHHHHHHHHHHcCcc
Confidence            7 89999999999999999974

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=2.6e-44  Score=291.91  Aligned_cols=222  Identities=21%  Similarity=0.231  Sum_probs=191.5

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh----hCCCceEEEeecCCHHHHHHHHHhc---CC
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSKV---GP   81 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~---g~   81 (238)
                      ..+.++++||||++|||+++|++|+++|++|++++|+.+.++++.+    ...++.++++|++|+++++++++++   ++
T Consensus        30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~  109 (275)
T 4imr_A           30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP  109 (275)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            3456789999999999999999999999999999999877555443    3457889999999999998887654   89


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+|
T Consensus       110 iD~lvnnAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asKaa  187 (275)
T 4imr_A          110 VDILVINASAQINATLSALTPND-LAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRPKSVVTAYAATKAA  187 (275)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCCCchhhHHHHHH
Confidence            99999999998777888888888 999999999999999999999998876 7999999999998888888889999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC-CCCccCCcccCC-CCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-DPAKAGPMLAKT-PLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~-~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+++++.|++++||+||+|+||+++|++...... .++......... |++|+++|+|+|++++||+|+.
T Consensus       188 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~  260 (275)
T 4imr_A          188 QHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEA  260 (275)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999998653211 122222333334 8999999999999999999974

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=6.8e-43  Score=282.33  Aligned_cols=222  Identities=20%  Similarity=0.282  Sum_probs=187.1

Q ss_pred             CCCcCCCCCCCCC-CchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeecCCHHHHHHHHHhc---
Q psy14567          9 PDRTNTKGGDYPK-PGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVSKV---   79 (238)
Q Consensus         9 ~~~~~v~~itG~s-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~---   79 (238)
                      ..+.++++||||+ +|||+++|++|+++|++|++++|+.+.++++.++.     .++.++++|++|+++++++++++   
T Consensus        19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   98 (266)
T 3o38_A           19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK   98 (266)
T ss_dssp             TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            3467789999998 59999999999999999999999998877665543     46889999999999998887654   


Q ss_pred             -CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHH
Q psy14567         80 -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        80 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                       +++|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|+|.+++..++||++||..+..+.++...|+++
T Consensus        99 ~g~id~li~~Ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  177 (266)
T 3o38_A           99 AGRLDVLVNNAGLGGQTPVVDMTDEE-WDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAA  177 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             hCCCcEEEECCCcCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHH
Confidence             8999999999998777888888888 99999999999999999999999887447899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++|+++++.+++++||+||+|+||+++|++.+... .++....+....|++|+.+|+|+|++++||+++.
T Consensus       178 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~  250 (266)
T 3o38_A          178 KAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS-SSELLDRLASDEAFGRAAEPWEVAATIAFLASDY  250 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------CCTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC-cHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999999976543 3455566677889999999999999999999974

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.5e-43  Score=286.91  Aligned_cols=222  Identities=24%  Similarity=0.284  Sum_probs=169.4

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHHh----hCCCceEEEeecCCHHHHHHHHHh----
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSK----   78 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~----   78 (238)
                      ...+.++++||||++|||+++|++|+++|++|++++| +.+.++++.+    ...++.++++|++|++++++++++    
T Consensus        25 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  104 (280)
T 4da9_A           25 TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE  104 (280)
T ss_dssp             SCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred             hccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3445678999999999999999999999999999985 6665554433    345788999999999998887764    


Q ss_pred             cCCccEEEEccCC--CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CceEEEEccccccccCCCCch
Q psy14567         79 VGPVDVLINNAAV--ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI--QGSIVNVSSIAGKTALEGHTI  154 (238)
Q Consensus        79 ~g~id~li~~ag~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  154 (238)
                      +|++|++|||||+  ....++.+.+.++ |++.+++|+.+++.++++++|.|.+++.  .|+||++||..+..+.++...
T Consensus       105 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~  183 (280)
T 4da9_A          105 FGRIDCLVNNAGIASIVRDDFLDLKPEN-FDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLD  183 (280)
T ss_dssp             HSCCCEEEEECC------CCGGGCCHHH-HHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHH
T ss_pred             cCCCCEEEECCCccccCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccH
Confidence            4899999999998  4456777888888 9999999999999999999999987542  579999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCccc-CCCCCCcCCCCCcccccccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLA-KTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.....  ++....... ..|++|+++|+|+|++++||+|+.
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  260 (280)
T 4da9_A          184 YCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS--GKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQ  260 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CCBCHHHHHHHHHHHHTST
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc--hhHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999999976532  222233333 679999999999999999999975

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-43  Score=285.85  Aligned_cols=224  Identities=21%  Similarity=0.310  Sum_probs=191.8

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh-----CCCceEEEeecCCHHHHHHHHHh---
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA-----FPNVQTVQVDLQDWARTRAAVSK---   78 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~---   78 (238)
                      ....+.++++||||+||||++++++|+++|++|++++|+.++++++.++     ..++.++++|++|++++++++++   
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   95 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3445667899999999999999999999999999999998877665433     34678899999999999887764   


Q ss_pred             -cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccc-ccccCCCCchhh
Q psy14567         79 -VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIA-GKTALEGHTIYS  156 (238)
Q Consensus        79 -~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~-~~~~~~~~~~y~  156 (238)
                       +|++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||.. +..+.++...|+
T Consensus        96 ~~g~iD~lvnnAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~Y~  173 (267)
T 1vl8_A           96 KFGKLDTVVNAAGINRRHPAEEFPLDE-FRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTMPNISAYA  173 (267)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCSSSCHHHH
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhccCCCCChhHH
Confidence             48999999999988777777888888 999999999999999999999998776 68999999998 888888899999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +||+++++++++++.|++++||++|+|+||+++|++.......++....+....|++|+++|+|+|++++||+++.
T Consensus       174 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~  249 (267)
T 1vl8_A          174 ASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEE  249 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999986542111222223345578999999999999999999874

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-43  Score=284.76  Aligned_cols=219  Identities=21%  Similarity=0.256  Sum_probs=176.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+..++..++. ..+.++++|++|++++++++++    +|++|+
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35578899999999999999999999999999999998877766554 3588999999999999888764    489999


Q ss_pred             EEEccCCCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCceEEEEccccccccCCCCchh
Q psy14567         85 LINNAAVARFDRFL----DIDEENLIDSIFDVNIKAVINISQVVSKTMIDH-----KIQGSIVNVSSIAGKTALEGHTIY  155 (238)
Q Consensus        85 li~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~~~~~y  155 (238)
                      +|||||+....++.    +.+.++ |++.+++|+.+++.++++++|.|.++     +..|+||++||..+..+.++...|
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  163 (257)
T 3tpc_A           85 LVNCAGTAPGEKILGRSGPHALDS-FARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAY  163 (257)
T ss_dssp             EEECCCCCCCCCSEETTEECCHHH-HHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             EEECCCCCCCCccccccccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcch
Confidence            99999987654433    456677 99999999999999999999999875     236899999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCC-CCcCCCCCccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPL-GRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++||+++++|+++++.|++++||+||+|+||+++|++....  .++....+....|+ +|+++|+|+|+++.||+++
T Consensus       164 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~r~~~~~dva~~v~~l~s~  238 (257)
T 3tpc_A          164 AASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGM--PQDVQDALAASVPFPPRLGRAEEYAALVKHICEN  238 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC--CHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHccc
Confidence            99999999999999999999999999999999999997653  23444556667888 9999999999999999987

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-43  Score=285.51  Aligned_cols=221  Identities=24%  Similarity=0.344  Sum_probs=190.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+.+.++++.++    ..++.++++|++|++++++++++    +|+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            3457889999999999999999999999999999998877665443    34688899999999998887754    489


Q ss_pred             ccEEEEccCCC-CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         82 VDVLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        82 id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      +|++|||||+. ...++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+
T Consensus        85 id~lv~nAg~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~  162 (262)
T 1zem_A           85 IDFLFNNAGYQGAFAPVQDYPSDD-FARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPNMAAYGTSKG  162 (262)
T ss_dssp             CCEEEECCCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCccccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCCchHHHHHH
Confidence            99999999987 556777788887 999999999999999999999998776 689999999999888888899999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCC------------CC-CCC-ccCCcccCCCCCCcCCCCCcccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG------------WS-DPA-KAGPMLAKTPLGRFAGKLKPKPWNR  226 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~------------~~-~~~-~~~~~~~~~~~~r~~~~~~ia~~~~  226 (238)
                      ++++|+++++.|++++||+||+|+||+++|+|....            .. .++ ....+....|++|+++|+|+|+++.
T Consensus       163 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~  242 (262)
T 1zem_A          163 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA  242 (262)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            999999999999999999999999999999986431            11 111 2222345679999999999999999


Q ss_pred             cccccc
Q psy14567        227 WLLPSV  232 (238)
Q Consensus       227 ~l~s~~  232 (238)
                      ||+|+.
T Consensus       243 ~l~s~~  248 (262)
T 1zem_A          243 FLLGDD  248 (262)
T ss_dssp             HHHSGG
T ss_pred             HHcCch
Confidence            999974

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-43  Score=286.58  Aligned_cols=217  Identities=23%  Similarity=0.262  Sum_probs=182.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEe-cCChHhHHHHHh----hCCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIAL-SKTQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      +.++++||||++|||+++|++|+++|++|+++ .|+.+..+++.+    ....+.++++|++|+++++++++++    |+
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999887 556555554433    3456889999999999998887654    89


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|++   +|+||++||..+..+.++...|++||+|
T Consensus       106 iD~lvnnAG~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asKaa  181 (267)
T 3u5t_A          106 VDVLVNNAGIMPLTTIAETGDAV-FDRVIAVNLKGTFNTLREAAQRLRV---GGRIINMSTSQVGLLHPSYGIYAAAKAG  181 (267)
T ss_dssp             EEEEEECCCCCCCCCGGGCCHHH-HHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhh---CCeEEEEeChhhccCCCCchHHHHHHHH
Confidence            99999999998878888888888 9999999999999999999999964   4799999999998888999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+++++.|++++||+||+|+||+++|++..... .++....+....|++|+++|+|+|++++||+|+.
T Consensus       182 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  251 (267)
T 3u5t_A          182 VEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK-SDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPD  251 (267)
T ss_dssp             HHHHHHHHHHHTTTSCCEEEEEEECCBC------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTT
T ss_pred             HHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999975432 2344455667789999999999999999999974

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-43  Score=285.59  Aligned_cols=220  Identities=29%  Similarity=0.380  Sum_probs=185.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----c-CC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----V-GP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~-g~   81 (238)
                      +.++++||||++|||++++++|+++|++|++++|+.++++++.++    ..++.++++|++|++++++++++    + |+
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999998876655433    34688899999999999887754    4 89


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||++
T Consensus       100 id~lv~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a  177 (273)
T 1ae1_A          100 LNILVNNAGVVIHKEAKDFTEKD-YNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALPSVSLYSASKGA  177 (273)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCCCCCcchhHHHHHH
Confidence            99999999988777788888888 999999999999999999999998776 6899999999999888999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC----CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS----DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++++.|++++||+||+|+||+++|++......    .++....+....|++|+++|+|+|+++.||+|+.
T Consensus       178 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~  252 (273)
T 1ae1_A          178 INQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPA  252 (273)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999998654322    1122223345579999999999999999999874

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-42  Score=283.40  Aligned_cols=223  Identities=23%  Similarity=0.284  Sum_probs=187.3

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC------------hHhHHHH----HhhCCCceEEEeecCCHH
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT------------QANLDSL----KQAFPNVQTVQVDLQDWA   70 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~------------~~~~~~~----~~~~~~~~~~~~D~~~~~   70 (238)
                      +...+.++++||||++|||+++|++|+++|++|++++|+            .+.+++.    .....++.++++|++|++
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   84 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA   84 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            344566789999999999999999999999999999997            4444433    333457889999999999


Q ss_pred             HHHHHHHh----cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc
Q psy14567         71 RTRAAVSK----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK  146 (238)
Q Consensus        71 ~v~~~~~~----~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  146 (238)
                      ++++++++    +|++|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+.
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~  162 (281)
T 3s55_A           85 ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQ-WDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGH  162 (281)
T ss_dssp             HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGG
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhc
Confidence            99888765    48999999999998878888888888 999999999999999999999998877 7999999999999


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC----CCCCccCC----------cccCCCC
Q psy14567        147 TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW----SDPAKAGP----------MLAKTPL  212 (238)
Q Consensus       147 ~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~----~~~~~~~~----------~~~~~~~  212 (238)
                      .+.++...|++||+++++|+++++.|++++||+||+|+||+++|+|.....    ..+.....          .....| 
T Consensus       163 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  241 (281)
T 3s55_A          163 SANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY-  241 (281)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSS-
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccC-
Confidence            999999999999999999999999999999999999999999999875310    00000000          112334 


Q ss_pred             CCcCCCCCcccccccccccc
Q psy14567        213 GRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       213 ~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+++|+|+|++++||+|+.
T Consensus       242 ~~~~~p~dvA~~v~~L~s~~  261 (281)
T 3s55_A          242 APFLKPEEVTRAVLFLVDEA  261 (281)
T ss_dssp             CSCBCHHHHHHHHHHHHSGG
T ss_pred             cCCCCHHHHHHHHHHHcCCc
Confidence            89999999999999999974

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=7e-43  Score=281.42  Aligned_cols=220  Identities=23%  Similarity=0.257  Sum_probs=183.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-HHHHHhh-----CCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-LDSLKQA-----FPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.+. ++++.++     ..++.++++|++|++++++++++    +|
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            34678999999999999999999999999999999877 6655433     34688899999999999888765    48


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+
T Consensus        83 ~iD~lv~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  160 (260)
T 1x1t_A           83 RIDILVNNAGIQHTALIEDFPTEK-WDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCCCCCchHHHHHH
Confidence            999999999988767777788887 999999999999999999999998776 689999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC---------CCccCCc-ccCCCCCCcCCCCCcccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD---------PAKAGPM-LAKTPLGRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~---------~~~~~~~-~~~~~~~r~~~~~~ia~~~~~l~s  230 (238)
                      ++++++++++.|++++||++|+|+||+++|++.......         ++....+ ....|++|+++|+|+|+++.||++
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s  240 (260)
T 1x1t_A          161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999986543210         1222233 445689999999999999999998


Q ss_pred             cc
Q psy14567        231 SV  232 (238)
Q Consensus       231 ~~  232 (238)
                      +.
T Consensus       241 ~~  242 (260)
T 1x1t_A          241 DA  242 (260)
T ss_dssp             GG
T ss_pred             hh
Confidence            74

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.2e-42  Score=278.33  Aligned_cols=219  Identities=23%  Similarity=0.258  Sum_probs=181.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh-HhHHH-HHhhCCCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ-ANLDS-LKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~-~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+. +++++ +.+...++.++++|++|++++++++++    +|++|
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            3456889999999999999999999999999999998 66654 333345688899999999999888765    48999


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||++++
T Consensus        85 ~lv~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  162 (249)
T 2ew8_A           85 ILVNNAGIYPLIPFDELTFEQ-WKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYISTKAANI  162 (249)
T ss_dssp             EEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCSSCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCCCchhHHHHHHHHH
Confidence            999999988777777888888 999999999999999999999998876 689999999999988889999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCccc-CCCCC-CCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGR-TGWSD-PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~-~~~~~-~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++.|++++||++|+|+||+++|++.. ..... ++....+.  .|++|+.+|+|+|++++||+++.
T Consensus       163 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~dva~~~~~l~s~~  231 (249)
T 2ew8_A          163 GFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML--QAIPRLQVPLDLTGAAAFLASDD  231 (249)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCC------------------CTT--SSSCSCCCTHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhh--CccCCCCCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999875 32111 12222222  68899999999999999999874

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=1.1e-42  Score=283.19  Aligned_cols=217  Identities=25%  Similarity=0.340  Sum_probs=183.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.++++++.+.. .++.++++|+++++++++++++    +|++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4578899999999999999999999999999999999988887765 4688899999999999887765    4899999


Q ss_pred             EEccCCCCCC-CC----CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         86 INNAAVARFD-RF----LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        86 i~~ag~~~~~-~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      |||||+.... ++    .+.+.++ |++++++|+.+++.++++++|.|.++  +|+||++||..+..+.++...|++||+
T Consensus        84 vnnAg~~~~~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKa  160 (281)
T 3zv4_A           84 IPNAGIWDYSTALADLPEDKIDAA-FDDIFHVNVKGYIHAVKACLPALVSS--RGSVVFTISNAGFYPNGGGPLYTATKH  160 (281)
T ss_dssp             ECCCCCCCTTCCGGGSCTTTHHHH-HHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGTSSSSSCHHHHHHHH
T ss_pred             EECCCcCccccccccCChhhhHHH-HHHHHhhhhHHHHHHHHHHHHHHHhc--CCeEEEEecchhccCCCCCchhHHHHH
Confidence            9999986432 22    2333455 99999999999999999999999875  489999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC--------CCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS--------DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++++|+++++.|++++ ||||+|+||+++|+|......        ..+....+....|++|+++|+|+|++++||+|+
T Consensus       161 a~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~  238 (281)
T 3zv4_A          161 AVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATR  238 (281)
T ss_dssp             HHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHST
T ss_pred             HHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhcc
Confidence            9999999999999997 999999999999998653211        111223455678999999999999999999994

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=4.4e-43  Score=288.04  Aligned_cols=221  Identities=29%  Similarity=0.319  Sum_probs=186.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC------------hHhHHHH----HhhCCCceEEEeecCCHHHHH
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT------------QANLDSL----KQAFPNVQTVQVDLQDWARTR   73 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~------------~~~~~~~----~~~~~~~~~~~~D~~~~~~v~   73 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+            .+.+++.    .+...++.++++|++|+++++
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            356789999999999999999999999999999887            4444443    334457889999999999998


Q ss_pred             HHHHh----cCCccEEEEccCCCCCCC-CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc
Q psy14567         74 AAVSK----VGPVDVLINNAAVARFDR-FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA  148 (238)
Q Consensus        74 ~~~~~----~g~id~li~~ag~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  148 (238)
                      +++++    +|++|++|||||+..... +.+.+.++ |++.+++|+.+++.++++++|.|.+++..|+||++||..+..+
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~  184 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKT-WRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG  184 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC
Confidence            88764    489999999999886654 77888888 9999999999999999999999987654689999999999999


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC---------CCCCcc-----CCcccCCCCCC
Q psy14567        149 LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW---------SDPAKA-----GPMLAKTPLGR  214 (238)
Q Consensus       149 ~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~---------~~~~~~-----~~~~~~~~~~r  214 (238)
                      .++...|++||+|+++|+++++.|++++||+||+|+||+++|+|.....         ..+...     .......| +|
T Consensus       185 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r  263 (299)
T 3t7c_A          185 AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-IP  263 (299)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-CS
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-cC
Confidence            9999999999999999999999999999999999999999999865310         000000     01234456 89


Q ss_pred             cCCCCCcccccccccccc
Q psy14567        215 FAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       215 ~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+|+|++++||+|+.
T Consensus       264 ~~~pedvA~~v~fL~s~~  281 (299)
T 3t7c_A          264 YVEPADISNAILFLVSDD  281 (299)
T ss_dssp             CBCHHHHHHHHHHHHSGG
T ss_pred             CCCHHHHHHHHHHHhCcc
Confidence            999999999999999975

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1.3e-43  Score=287.13  Aligned_cols=219  Identities=20%  Similarity=0.286  Sum_probs=186.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC-hHhHHHH----HhhCCCceEEEeecCCHHHHHHHHHhc----C
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT-QANLDSL----KQAFPNVQTVQVDLQDWARTRAAVSKV----G   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~~----g   80 (238)
                      .+.++++||||++|||+++|++|+++|++|++++++ .+..+++    .+...++.++++|++|+++++++++++    |
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            356789999999999999999999999999987654 4444443    333457889999999999998887654    8


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccc-ccccCCCCchhhHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIA-GKTALEGHTIYSASK  159 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~-~~~~~~~~~~y~~sK  159 (238)
                      ++|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+   .|+||++||.. +..+.++...|++||
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~~Y~asK  171 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEE-FDRVFSLNTRGQFFVAREAYRHLTE---GGRIVLTSSNTSKDFSVPKHSLYSGSK  171 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCTTTTTCCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHhc---CCeEEEEeCchhccCCCCCCchhHHHH
Confidence            999999999998878888888888 9999999999999999999999965   57999999988 556788899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCC----------CCCCCccCCcccCCCCCCcCCCCCccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG----------WSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLL  229 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~  229 (238)
                      +++++|+++++.|++++||+||+|+||+++|++....          ...++.........|++|+++|+|+|++++||+
T Consensus       172 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~  251 (270)
T 3is3_A          172 GAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGFLV  251 (270)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999986521          111122233445689999999999999999999


Q ss_pred             ccc
Q psy14567        230 PSV  232 (238)
Q Consensus       230 s~~  232 (238)
                      |+.
T Consensus       252 s~~  254 (270)
T 3is3_A          252 SKE  254 (270)
T ss_dssp             SGG
T ss_pred             CCc
Confidence            975

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-43  Score=284.81  Aligned_cols=221  Identities=24%  Similarity=0.321  Sum_probs=190.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh------CCCceEEEeecCCHHHHHHHHHh----c
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA------FPNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+.++++++.++      ..++.++++|++|++++++++++    +
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999999998876655433      34688899999999999888764    4


Q ss_pred             CCccEEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHH
Q psy14567         80 GPVDVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        80 g~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      |++|++|||||+... .++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++|
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  168 (267)
T 1iy8_A           91 GRIDGFFNNAGIEGKQNPTESFTAAE-FDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGNQSGYAAA  168 (267)
T ss_dssp             SCCSEEEECCCCCCCCBCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCSSBHHHHHH
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCCCCCccHHHH
Confidence            899999999998765 6677778887 999999999999999999999998776 6899999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCC--CCCCCccC----CcccCCCCCCcCCCCCcccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG--WSDPAKAG----PMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~--~~~~~~~~----~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++++++++.|++++||+||+|+||+++|++....  ...++...    .+....|++|+++|+|+|++++||+|+.
T Consensus       169 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~  248 (267)
T 1iy8_A          169 KHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD  248 (267)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999986431  00112212    3445679999999999999999999874

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=6.5e-43  Score=279.26  Aligned_cols=216  Identities=26%  Similarity=0.337  Sum_probs=189.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~li   86 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++++++.++.+ +.++++|++|++++++++++    +|++|++|
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   82 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG-AHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT-CEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-CEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45678999999999999999999999999999999998888776654 78899999999999887755    48999999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||.. ..+.++...|+++|+++++++
T Consensus        83 n~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~  159 (245)
T 1uls_A           83 HYAGITRDNFHWKMPLED-WELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YLGNLGQANYAASMAGVVGLT  159 (245)
T ss_dssp             ECCCCCCCCCGGGCCHHH-HHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-hcCCCCchhHHHHHHHHHHHH
Confidence            999988777777888888 999999999999999999999998766 68999999998 778888899999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.|++++||++|+|+||+++|++....  .++.........|++|+.+|+|+|+.++||+++.
T Consensus       160 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~  223 (245)
T 1uls_A          160 RTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDE  223 (245)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHhHhCeEEEEEEeCcCcCcchhhc--CHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999986542  1222223345578999999999999999999874

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1e-43  Score=291.44  Aligned_cols=220  Identities=17%  Similarity=0.146  Sum_probs=190.4

Q ss_pred             CCCcCCCCCCCCCC--chHHHHHHHHhhCCCEEEEecCChHh---HHHHHhhCCCceEEEeecCCHHHHHHHHHhc----
Q psy14567          9 PDRTNTKGGDYPKP--GIGRCIVEKLSQHEAIIIALSKTQAN---LDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----   79 (238)
Q Consensus         9 ~~~~~v~~itG~s~--gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----   79 (238)
                      ..+.++++||||+|  |||+++|++|+++|++|++++|+.+.   ++++.+..+...++++|++|+++++++++++    
T Consensus        27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (296)
T 3k31_A           27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW  106 (296)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            34567899999997  99999999999999999999999754   3344444456789999999999998888655    


Q ss_pred             CCccEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchh
Q psy14567         80 GPVDVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIY  155 (238)
Q Consensus        80 g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y  155 (238)
                      |++|++|||||+...    .++.+.+.++ |++.+++|+.+++.++++++|.|.+   .|+||++||..+..+.++...|
T Consensus       107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~---~g~IV~isS~~~~~~~~~~~~Y  182 (296)
T 3k31_A          107 GSLDFVVHAVAFSDKNELKGRYVDTSLGN-FLTSMHISCYSFTYIASKAEPLMTN---GGSILTLSYYGAEKVVPHYNVM  182 (296)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTSCCTTTTHH
T ss_pred             CCCCEEEECCCcCCcccccCChhhCCHHH-HHHHHHHHHHHHHHHHHHHHHHhhc---CCEEEEEEehhhccCCCCchhh
Confidence            899999999998764    6677888888 9999999999999999999999865   5899999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.......++.........|++|+++|+|+|++++||+|+.
T Consensus       183 ~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~  259 (296)
T 3k31_A          183 GVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDL  259 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence            99999999999999999999999999999999999987553222233344556789999999999999999999973

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.9e-43  Score=280.91  Aligned_cols=217  Identities=24%  Similarity=0.258  Sum_probs=176.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      ..++++||||++|||+++|++|+++|++|++++|+.++++++.++    ...+.++.+|++|++++++++++    +|++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            356889999999999999999999999999999999887766544    35688899999999999888765    4899


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+++
T Consensus        83 D~lVnnAG~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal  160 (264)
T 3tfo_A           83 DVLVNNAGVMPLSPLAAVKVDE-WERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVVPTAAVYCATKFAV  160 (264)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccCCCChhHHHHHHHH
Confidence            9999999998878888888888 999999999999999999999998877 79999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGL  234 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~  234 (238)
                      ++|+++++.|+ + |||||+|+||+++|+|......... ....  ....++..+|+|+|++++||+|+...
T Consensus       161 ~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~~-~~~~--~~~~~~~~~pedvA~~v~~l~s~~~~  227 (264)
T 3tfo_A          161 RAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEET-MAAM--DTYRAIALQPADIARAVRQVIEAPQS  227 (264)
T ss_dssp             HHHHHHHHHHC-S-SEEEEEEEECCC--------------------------CCCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchhH-HHHH--HhhhccCCCHHHHHHHHHHHhcCCcc
Confidence            99999999998 5 9999999999999999765322211 1100  11123357999999999999998643

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=7.7e-43  Score=279.03  Aligned_cols=218  Identities=20%  Similarity=0.332  Sum_probs=193.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      +.++++||||++|||++++++|+++|++|++++|+++..+++.++    ..++.++++|++|+++++++++++    +++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999999877665443    356889999999999998887654    789


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||+....++.+.+.++ |++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.++...|++||+++
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  161 (247)
T 3lyl_A           84 DILVNNAGITRDNLMMRMSEDE-WQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAGNPGQTNYCAAKAGV  161 (247)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCchhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCCCcHHHHHHHHHH
Confidence            9999999998777777888888 999999999999999999999998877 78999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++.+++++||++|+|+||+++|++....  .++.........|.+|+.+|+|+|+++.||+++.
T Consensus       162 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~  229 (247)
T 3lyl_A          162 IGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL--TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEE  229 (247)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS--CHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc--cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999997653  2233344556789999999999999999999874

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-42  Score=281.66  Aligned_cols=216  Identities=24%  Similarity=0.308  Sum_probs=186.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC-hHhHHHHH----hhCCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT-QANLDSLK----QAFPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~----~~~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      .+.++++||||++|||+++|++|+++|++|++++++ .+..+++.    +....+.++++|++|++++++++++    +|
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            356789999999999999999999999999998655 44444433    3345788999999999999887754    48


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-CCCCchhhHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-LEGHTIYSASK  159 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-~~~~~~y~~sK  159 (238)
                      ++|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+   .|+||++||..+..+ .++...|++||
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~Y~asK  184 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVAD-FDEVMAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAELVPWPGISLYSASK  184 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCGGGTCCCSTTCHHHHHHH
T ss_pred             CCcEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEeChhhccCCCCCchHHHHHH
Confidence            999999999998878888888888 9999999999999999999999864   579999999877665 68899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++|+++++.|++++||+||+|+||+++|++...   ..+..+......|++|+++|+|+|++++||+|+.
T Consensus       185 aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~---~~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~  254 (271)
T 3v2g_A          185 AALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPA---DGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQ  254 (271)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCS---SCSSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccc---cchhHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999754   2233444566789999999999999999999874

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=1.6e-42  Score=279.43  Aligned_cols=221  Identities=21%  Similarity=0.272  Sum_probs=179.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhc----CCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV----GPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~----g~id~l   85 (238)
                      +.++++||||++|||+++|++|+++|++|++++|++++++++.++. ..+.++++|++|+++++++++++    +++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4578999999999999999999999999999999999988877655 46889999999999998877654    899999


Q ss_pred             EEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         86 INNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK---IQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        86 i~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      |||||+.. ..++.+.+.++ |++.+++|+.+++.++++++|.|.+++   ..++||++||..+..+.++...|+++|++
T Consensus        88 i~~Ag~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa  166 (261)
T 3n74_A           88 VNNAGIGHKPQNAELVEPEE-FDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGW  166 (261)
T ss_dssp             EECCCCCCCSCCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHHH
T ss_pred             EECCccCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHHH
Confidence            99999875 45666677787 999999999999999999999998753   14689999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC--CCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW--SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+++++.|++++||+||+|+||+++|++.....  ..++....+....|++|+.+|+|+|++++||+|+.
T Consensus       167 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  239 (261)
T 3n74_A          167 VVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQ  239 (261)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCc
Confidence            999999999999999999999999999999976543  23445566777889999999999999999999874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.4e-43  Score=280.75  Aligned_cols=216  Identities=21%  Similarity=0.244  Sum_probs=184.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCC--CEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhc----CCccEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV----GPVDVL   85 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~----g~id~l   85 (238)
                      ++++||||++|||+++|++|+++|  ++|++++|+.+.++++.++. .++.++++|++|+++++++++++    |++|++
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   82 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSL   82 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccEE
Confidence            678999999999999999999885  78999999999888877654 35888999999999998887654    899999


Q ss_pred             EEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         86 INNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        86 i~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      |||||+... .++.+.+.++ |++.+++|+.+++.++++++|+|.+++  |+||++||..+..+.++...|++||+++++
T Consensus        83 vnnAg~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  159 (254)
T 3kzv_A           83 VANAGVLEPVQNVNEIDVNA-WKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMYFSSWGAYGSSKAALNH  159 (254)
T ss_dssp             EEECCCCCCCTTTTSCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCSSCCSHHHHHHHHHHHH
T ss_pred             EECCcccCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccCCCCcchHHHHHHHHHH
Confidence            999998643 6777888888 999999999999999999999998764  899999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-------CCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-------PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      |+++++.|+  .|||||+|+||+++|+|.......       ++....+....|++|+++|+|+|++++||+|+..
T Consensus       160 ~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~  233 (254)
T 3kzv_A          160 FAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGI  233 (254)
T ss_dssp             HHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCC
T ss_pred             HHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhcc
Confidence            999999998  589999999999999998654321       2223344566799999999999999999998763

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.1e-42  Score=285.00  Aligned_cols=218  Identities=23%  Similarity=0.232  Sum_probs=189.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh--HhHHHHH----hhCCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ--ANLDSLK----QAFPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~----~~~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.  +..+++.    +...++.++++|++|++++++++++    +|
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            567899999999999999999999999999998873  3333332    2335688899999999999888765    48


Q ss_pred             CccEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         81 PVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        81 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      ++|++|||||+.. ..++.+.+.++ |++.+++|+.+++.++++++|.|.+   +|+||++||..+..+.++...|++||
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~Y~asK  203 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQ-FQQTFAVNVFALFWITQEAIPLLPK---GASIITTSSIQAYQPSPHLLDYAATK  203 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHH-HHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECChhhccCCCCchHHHHHH
Confidence            9999999999864 45677788888 9999999999999999999998854   47999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++|+++++.|++++||+||+|+||+++|++.......++....+....|++|+++|+|+|++++||+|+.
T Consensus       204 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~  276 (294)
T 3r3s_A          204 AAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQE  276 (294)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999985443344555667778899999999999999999999975

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1.8e-42  Score=278.18  Aligned_cols=218  Identities=24%  Similarity=0.224  Sum_probs=191.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++++++.++. .++.++++|++|++++++++++    +|++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4567899999999999999999999999999999998888776655 3578889999999999887764    4899999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||+....++.+.+.++ |++++++|+.+++.++++++|.|++++ .|+||++||..+..+.++...|+++|++++++
T Consensus        84 v~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  161 (254)
T 1hdc_A           84 VNNAGISTGMFLETESVER-FRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGVRGL  161 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCCCchhHHHHHHHHHHH
Confidence            9999988766777788887 999999999999999999999998876 68999999999988888999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcC-CCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA-GKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~ia~~~~~l~s~~  232 (238)
                      +++++.|++++||++|+|+||+++|++....  .++.........|++|++ +|+|+|+.++||+++.
T Consensus       162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~  227 (254)
T 1hdc_A          162 SKLAAVELGTDRIRVNSVHPGMTYTPMTAET--GIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDT  227 (254)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHHH--TCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHhhhcCeEEEEEecccCcCcccccc--chhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999986542  122233344567899999 9999999999999874

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-43  Score=281.26  Aligned_cols=219  Identities=23%  Similarity=0.309  Sum_probs=191.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++++++. +.+++.++++|++|+++++++.++++++|++|||||
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag   83 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence            4568899999999999999999999999999999998877766 555788999999999999999899999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCC-CCchhhHHHHHHHHHHHHH
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALE-GHTIYSASKAALDSITRTM  169 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~~~~y~~sK~al~~l~~~l  169 (238)
                      +....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.+ +...|+++|++++++++++
T Consensus        84 ~~~~~~~~~~~~~~-~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~l  161 (246)
T 2ag5_A           84 FVHHGTVLDCEEKD-WDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSV  161 (246)
T ss_dssp             CCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCcccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHH
Confidence            88777777788887 999999999999999999999998776 68999999999887776 8889999999999999999


Q ss_pred             HHHhCCCCeEEEEEeCCceecCcccCCCC----CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        170 ALELGPYNIRVNSVQPTVVMTQMGRTGWS----DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       170 ~~~~~~~~i~v~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.|++++||++|+|+||+++|++......    .++....+....|++|+++|+|+|++++||+|+.
T Consensus       162 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~  228 (246)
T 2ag5_A          162 AADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDE  228 (246)
T ss_dssp             HHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGG
T ss_pred             HHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999998543110    1112223345578999999999999999999874

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=5.1e-43  Score=282.24  Aligned_cols=221  Identities=25%  Similarity=0.340  Sum_probs=190.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----c-C
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----V-G   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~-g   80 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+.+.++++.++    ..++.++++|++|++++++++++    + +
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3457889999999999999999999999999999998876655443    34688899999999999887754    4 7


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+
T Consensus        87 ~id~lv~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  164 (260)
T 2ae2_A           87 KLNILVNNAGIVIYKEAKDYTVED-YSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGATKG  164 (260)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCcchHHHHHH
Confidence            899999999988767777788888 999999999999999999999998776 689999999999888888999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccC---CcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAG---PMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++++.|++++||++|+|+||+++|++.......++...   .+....|++|+++|+|+|+++.||+++.
T Consensus       165 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~  239 (260)
T 2ae2_A          165 AMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPA  239 (260)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999998654222221111   3345578999999999999999999874

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=7.9e-43  Score=280.96  Aligned_cols=218  Identities=24%  Similarity=0.263  Sum_probs=173.5

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEe-cCChHhHHHH----HhhCCCceEEEeecCCHHHHHHHHHhc----
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIAL-SKTQANLDSL----KQAFPNVQTVQVDLQDWARTRAAVSKV----   79 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~~----   79 (238)
                      ..+.++++||||++|||+++|++|+++|++|+++ .|+.+..++.    .+...++.++++|++|+++++++++++    
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            3456789999999999999999999999999988 5565554443    333456889999999999998887654    


Q ss_pred             CCccEEEEccCCC-CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-ccCCCCchhhH
Q psy14567         80 GPVDVLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-TALEGHTIYSA  157 (238)
Q Consensus        80 g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~~y~~  157 (238)
                      |++|++|||||+. ...++.+.+.++ |++.+++|+.+++.++++++|.|.+   .|+||++||..+. .+.++...|++
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~~Y~a  160 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAF-WHQVLDVNLTSLFLTAKTALPKMAK---GGAIVTFSSQAGRDGGGPGALAYAT  160 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHH-HHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHCCSTTCHHHHH
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhc---CCEEEEEcCHHhccCCCCCcHHHHH
Confidence            8999999999987 556778888888 9999999999999999999999865   4799999999988 67888999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ||+++++|+++++.|++++ |+||+|+||+++|++..... .++..+.+....|++|+++|+|+|++++||+|+.
T Consensus       161 sKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~  233 (259)
T 3edm_A          161 SKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFT-KPEVRERVAGATSLKREGSSEDVAGLVAFLASDD  233 (259)
T ss_dssp             HHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-----------------------CCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCccccccc-ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999987 99999999999999976543 2455566677889999999999999999999874

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1.4e-42  Score=277.39  Aligned_cols=218  Identities=26%  Similarity=0.373  Sum_probs=188.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||+||||++++++|+++|++|++++| +.++++++.++    ..++.++++|++|++++++++++    +|+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3467899999999999999999999999999999 77766554433    34688899999999999888765    489


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|+++|++
T Consensus        83 id~lv~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a  160 (246)
T 2uvd_A           83 VDILVNNAGVTKDNLLMRMKEEE-WDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGNPGQANYVAAKAG  160 (246)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCCCCCchHHHHHHH
Confidence            99999999988767777888888 999999999999999999999998776 6899999999988888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++++.|++++||++|+|+||+++|++....  .++....+....|++|+++|+|+|+++.||+++.
T Consensus       161 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~  229 (246)
T 2uvd_A          161 VIGLTKTSAKELASRNITVNAIAPGFIATDMTDVL--DENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQ  229 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCC--CTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            99999999999999999999999999999986542  1222223344578999999999999999999874

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=8.4e-43  Score=280.34  Aligned_cols=218  Identities=27%  Similarity=0.321  Sum_probs=187.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~li   86 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.+. +++.++... .++++|++|++++++++++    +|++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45678999999999999999999999999999999877 665554445 7899999999999887764    48999999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+++++++
T Consensus        83 ~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  160 (256)
T 2d1y_A           83 NNAAIAAPGSALTVRLPE-WRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASKGGLVNLT  160 (256)
T ss_dssp             ECCCCCCCBCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCCCChhHHHHHHHHHHHH
Confidence            999988777778888888 999999999999999999999998776 689999999999888888999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCC----CCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTG----WSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.|++++||++|+|+||+++|++....    ...++....+....|++|+.+|+|+|++++||+++.
T Consensus       161 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~  230 (256)
T 2d1y_A          161 RSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEK  230 (256)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999986431    111222223345578999999999999999999874

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=4.5e-43  Score=282.23  Aligned_cols=220  Identities=26%  Similarity=0.280  Sum_probs=188.6

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh--HHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN--LDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      .++++||||++|||++++++|+++|++|++++|+.+.  ++++.++    ..++.++++|++|++++++++++    +|+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3678999999999999999999999999999998876  5554433    34688899999999999887764    489


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++.+|+||++||..+..+.++...|++||++
T Consensus        82 iD~lv~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (258)
T 3a28_C           82 FDVLVNNAGIAQIKPLLEVTEED-LKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFA  160 (258)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHH-HHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHH
Confidence            99999999988777777888888 99999999999999999999999877623899999999998888899999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC-------CC--CCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW-------SD--PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~-------~~--~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+++++.|++++||+||+|+||+++|+|.....       ..  ++....+....|++|+++|+|+|+++.||+|+.
T Consensus       161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~  240 (258)
T 3a28_C          161 VRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASEN  240 (258)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999864311       01  222223345579999999999999999999874

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=2.5e-43  Score=284.85  Aligned_cols=218  Identities=26%  Similarity=0.330  Sum_probs=187.1

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      ++...+.++++||||++|||+++|++|+++|++|++++|+.+..+       ....+++|+++.+++++++++    +|+
T Consensus        22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   94 (266)
T 3uxy_A           22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------ADLHLPGDLREAAYADGLPGAVAAGLGR   94 (266)
T ss_dssp             ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------CSEECCCCTTSHHHHHHHHHHHHHHHSC
T ss_pred             hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------hhhccCcCCCCHHHHHHHHHHHHHhcCC
Confidence            344556788999999999999999999999999999999876532       224458999999998877754    489


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+.++...|++||+|
T Consensus        95 iD~lvnnAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa  172 (266)
T 3uxy_A           95 LDIVVNNAGVISRGRITETTDAD-WSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRPGPGHALYCLTKAA  172 (266)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCCCChHHHHHHHH
Confidence            99999999998878888888888 999999999999999999999998877 7999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC-----CCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW-----SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+++++.|++++||+||+|+||+++|++.+...     ..++....+....|++|+++|+|+|++++||+|+.
T Consensus       173 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  248 (266)
T 3uxy_A          173 LASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDA  248 (266)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999864321     11122244566789999999999999999999974

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=8.3e-43  Score=279.16  Aligned_cols=221  Identities=24%  Similarity=0.337  Sum_probs=182.0

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      ...+.++++||||++|||+++|++|+++|++|++++|+.++++++.++. ..+.++.+|+++++++++++++++++|++|
T Consensus        10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li   89 (249)
T 3f9i_A           10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILV   89 (249)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEE
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence            4457788999999999999999999999999999999999988876655 468889999999999999999999999999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||+....+..+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+++++++
T Consensus        90 ~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  167 (249)
T 3f9i_A           90 CNAGITSDTLAIRMKDQD-FDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGNPGQANYCASKAGLIGMT  167 (249)
T ss_dssp             ECCC-------------C-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--CCSCSHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCccccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccCCCCCchhHHHHHHHHHHH
Confidence            999988776777777777 999999999999999999999998876 789999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.+++++||++|+|+||+++|++....  .++....+....|++|+.+|+|+|+++.||+++.
T Consensus       168 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  231 (249)
T 3f9i_A          168 KSLSYEVATRGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNN  231 (249)
T ss_dssp             HHHHHHHGGGTEEEEEEEECCBC------C--CHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHcCcEEEEEecCccccCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCc
Confidence            999999999999999999999999997653  2333444556789999999999999999999874

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=4.3e-42  Score=278.39  Aligned_cols=219  Identities=24%  Similarity=0.273  Sum_probs=186.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC-hHhHHHHH----hhCCCceEEEeecCCHHHHHHHHHhc----C
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT-QANLDSLK----QAFPNVQTVQVDLQDWARTRAAVSKV----G   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~----~~~~~~~~~~~D~~~~~~v~~~~~~~----g   80 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+ .+..+.+.    +...++.++++|++|+++++++++++    +
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            456789999999999999999999999999999995 44444333    33356889999999999998888654    8


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||+....++.+.+.++ |++.+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.++...|++||+
T Consensus       107 ~id~li~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~  184 (271)
T 4iin_A          107 GLSYLVNNAGVVRDKLAIKMKTED-FHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERGNMGQTNYSASKG  184 (271)
T ss_dssp             SCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCcCCCcccccCCHHH-HHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCCCCCchHhHHHHH
Confidence            999999999998877777888888 999999999999999999999998876 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++++.+++++||+||+|+||+++|++....  .++.........|++|+.+|+|+|+++.||+++.
T Consensus       185 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~  254 (271)
T 4iin_A          185 GMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANL--KDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDH  254 (271)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhh--cHHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCC
Confidence            999999999999999999999999999999997653  2344555667789999999999999999999975

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1e-42  Score=284.04  Aligned_cols=212  Identities=18%  Similarity=0.167  Sum_probs=186.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-----------HHHHHhhCCCceEEEeecCCHHHHHHHHHhc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-----------LDSLKQAFPNVQTVQVDLQDWARTRAAVSKV   79 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   79 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.+.           .+++.+...++.++++|++|+++++++++++
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            45789999999999999999999999999999998752           3334444567899999999999998887654


Q ss_pred             ----CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-CCCch
Q psy14567         80 ----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-EGHTI  154 (238)
Q Consensus        80 ----g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~~  154 (238)
                          |++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|++++ .|+||++||..+..+. ++...
T Consensus        88 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~  165 (285)
T 3sc4_A           88 VEQFGGIDICVNNASAINLGSIEEVPLKR-FDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLEPKWLRPTP  165 (285)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCTTTSCHHH-HHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCSGGGSCSHH
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhccCCCCCCch
Confidence                8999999999998888888888888 999999999999999999999998776 7899999999988875 77899


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCC-ceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPT-VVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      |++||+++++|+++++.|++++||+||+|+|| +++|++.+....         ...|++|+++|+|+|++++||+|+..
T Consensus       166 Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~---------~~~~~~r~~~pedvA~~~~~l~s~~~  236 (285)
T 3sc4_A          166 YMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLG---------GDEAMARSRKPEVYADAAYVVLNKPS  236 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHT---------SCCCCTTCBCTHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhcc---------ccccccCCCCHHHHHHHHHHHhCCcc
Confidence            99999999999999999999999999999999 799998654221         22378899999999999999999865

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=4.3e-42  Score=276.75  Aligned_cols=212  Identities=21%  Similarity=0.210  Sum_probs=175.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~li   86 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.+...+..... ++.++++|++|+++++++++++    |++|++|
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv  104 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA-GAVALYGDFSCETGIMAFIDLLKTQTSSLRAVV  104 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH-TCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc-CCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            4578999999999999999999999999999999987654433322 3788999999999998887654    8999999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||+..... .+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+++++|+
T Consensus       105 ~nAg~~~~~~-~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~  181 (260)
T 3gem_A          105 HNASEWLAET-PGEEADN-FTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRKGSSKHIAYCATKAGLESLT  181 (260)
T ss_dssp             ECCCCCCCCC-TTCHHHH-HHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHH
T ss_pred             ECCCccCCCC-CCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCCCcHhHHHHHHHHHHHH
Confidence            9999876554 4556666 999999999999999999999998876 689999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++++.|+++ +|+||+|+||+++|++..    .++.........|++|+++|+|+|++++||++.
T Consensus       182 ~~la~e~~~-~Irvn~v~PG~v~t~~~~----~~~~~~~~~~~~p~~r~~~~edva~~v~~L~~~  241 (260)
T 3gem_A          182 LSFAARFAP-LVKVNGIAPALLMFQPKD----DAAYRANALAKSALGIEPGAEVIYQSLRYLLDS  241 (260)
T ss_dssp             HHHHHHHTT-TCEEEEEEECTTCC-------------------CCSCCCCCTHHHHHHHHHHHHC
T ss_pred             HHHHHHHCC-CCEEEEEeecccccCCCC----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhhC
Confidence            999999998 699999999999999753    234455566778999999999999999999853

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=8.4e-43  Score=285.53  Aligned_cols=219  Identities=19%  Similarity=0.201  Sum_probs=186.4

Q ss_pred             CCcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCChHh---HHHHHhhCCCceEEEeecCCHHHHHHHHHhc----C
Q psy14567         10 DRTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKTQAN---LDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----G   80 (238)
Q Consensus        10 ~~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g   80 (238)
                      .+.++++||||+  +|||+++|++|+++|++|++++|+++.   ++++.+..+.+.++++|++|+++++++++++    |
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            466789999999  559999999999999999999999643   4445555567889999999999998887654    8


Q ss_pred             CccEEEEccCCCC----CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         81 PVDVLINNAAVAR----FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        81 ~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                      ++|++|||||+..    ..++.+.+.++ |++.+++|+.+++.++++++|.|.+   .|+||++||..+..+.++...|+
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~Y~  184 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEAN-FTNTMLISVYSLTAVSRRAEKLMAD---GGSILTLTYYGAEKVMPNYNVMG  184 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHTTT---CEEEEEEECGGGTSBCTTTTHHH
T ss_pred             CCCEEEECCccCCcccccccccccCHHH-HHHHHHHHHHHHHHHHHHHHHhccC---CCEEEEEeehhhccCCCchHHHH
Confidence            9999999999875    46677788888 9999999999999999999999975   58999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.......++.........|++|+++|+|+|++++||+|+.
T Consensus       185 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  260 (293)
T 3grk_A          185 VAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDL  260 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999997654333334445556789999999999999999999974

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=4e-42  Score=278.34  Aligned_cols=219  Identities=24%  Similarity=0.364  Sum_probs=189.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEec-CChHhHHHHH----hhCCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALS-KTQANLDSLK----QAFPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~----~~~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      +.++++||||++|||+++|++|+++|++|++++ |+.+..++..    ....++.++.+|++|+++++++++++    |+
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGK  103 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            457889999999999999999999999999988 5555544432    23356899999999999998887654    89


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||+....++.+.+.++ |+..+++|+.+++.+++.++|.|.+++ .|+||++||..+..+.++...|++||+|
T Consensus       104 id~li~nAg~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa  181 (269)
T 3gk3_A          104 VDVLINNAGITRDATFMKMTKGD-WDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGAFGQANYASAKAG  181 (269)
T ss_dssp             CSEEEECCCCCCCBCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCcCCCcchhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCCCCcchHHHHHHH
Confidence            99999999998877888888888 999999999999999999999998876 6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+++++.+++++||+||+|+||+++|++..... .......+....|++|+.+|+|+|++++||+++.
T Consensus       182 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~  251 (269)
T 3gk3_A          182 IHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVP-QDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDD  251 (269)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------CCSGGGCTTSSCBCHHHHHHHHHHHTSTT
T ss_pred             HHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhc-hhHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCC
Confidence            999999999999999999999999999999976532 2222335667789999999999999999999975

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=2.6e-43  Score=285.28  Aligned_cols=216  Identities=24%  Similarity=0.328  Sum_probs=187.6

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCcc
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVD   83 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id   83 (238)
                      ...+.++++||||++|||+++|++|+++|++|++++|+.+..      ......+++|++|+++++++++++    |++|
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   83 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------VNVSDHFKIDVTNEEEVKEAVEKTTKKYGRID   83 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------TTSSEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------cCceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            445778999999999999999999999999999999987654      125678899999999998887654    8999


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||++++
T Consensus        84 ~lv~nAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  161 (269)
T 3vtz_A           84 ILVNNAGIEQYSPLHLTPTEI-WRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAATKNAAAYVTSKHALL  161 (269)
T ss_dssp             EEEECCCCCCCCCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCTTCHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCCCChhHHHHHHHHH
Confidence            999999998777888888888 999999999999999999999998877 799999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC-----CC----CCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW-----SD----PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~-----~~----~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+++++.|+++ +|+||+|+||+++|+|.....     ..    ++....+....|++|+++|+|+|++++||+|+.
T Consensus       162 ~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  238 (269)
T 3vtz_A          162 GLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDR  238 (269)
T ss_dssp             HHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCc
Confidence            999999999998 899999999999999864311     00    122334456789999999999999999999974

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=6.1e-42  Score=274.72  Aligned_cols=210  Identities=19%  Similarity=0.243  Sum_probs=184.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeec--CCHHHHHHHHHh----
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDL--QDWARTRAAVSK----   78 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~--~~~~~v~~~~~~----   78 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.++++++.++.     ..+.++.+|+  ++++++++++++    
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            46778999999999999999999999999999999998877655433     2688899999  999998887754    


Q ss_pred             cCCccEEEEccCCC-CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhH
Q psy14567         79 VGPVDVLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSA  157 (238)
Q Consensus        79 ~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~  157 (238)
                      +|++|++|||||+. ...++.+.+.++ |++++++|+.+++.++++++|+|.+++ .|+||++||..+..+.++...|++
T Consensus        90 ~g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  167 (252)
T 3f1l_A           90 YPRLDGVLHNAGLLGDVCPMSEQNPQV-WQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGRANWGAYAA  167 (252)
T ss_dssp             CSCCSEEEECCCCCCCCSCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCCEEEECCccCCCCCCcccCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccCCCCCchhHH
Confidence            48999999999985 346777888888 999999999999999999999998876 789999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ||+++++|+++++.|++++ ||||+|+||+++|++.......          .+..++.+|+|+|+.++||+|+.
T Consensus       168 sK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~~----------~~~~~~~~p~dva~~~~~L~s~~  231 (252)
T 3f1l_A          168 SKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFPT----------EDPQKLKTPADIMPLYLWLMGDD  231 (252)
T ss_dssp             HHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCTT----------CCGGGSBCTGGGHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCCc----------cchhccCCHHHHHHHHHHHcCcc
Confidence            9999999999999999987 9999999999999986542211          12356889999999999999984

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1e-42  Score=284.86  Aligned_cols=220  Identities=27%  Similarity=0.282  Sum_probs=186.7

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEec-CChHhHHHHHhh-----CCCceEEEeecCCHH-----------
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALS-KTQANLDSLKQA-----FPNVQTVQVDLQDWA-----------   70 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~~~-----~~~~~~~~~D~~~~~-----------   70 (238)
                      ...+.++++||||++|||++++++|+++|++|++++ |+.+.++++.++     ..++.++++|+++++           
T Consensus         5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (291)
T 1e7w_A            5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA   84 (291)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CC
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccc
Confidence            334567899999999999999999999999999999 998877665443     346889999999998           


Q ss_pred             ------HHHHHHHh----cCCccEEEEccCCCCCCCCCCCC--------------hHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14567         71 ------RTRAAVSK----VGPVDVLINNAAVARFDRFLDID--------------EENLIDSIFDVNIKAVINISQVVSK  126 (238)
Q Consensus        71 ------~v~~~~~~----~g~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~~n~~~~~~~~~~~~~  126 (238)
                            ++++++++    +|++|++|||||+....++.+.+              .++ |++++++|+.+++.++++++|
T Consensus        85 ~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~  163 (291)
T 1e7w_A           85 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETA-TADLFGSNAIAPYFLIKAFAH  163 (291)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHH-HHHHHHHHTHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHH-HHHHHHHHhHHHHHHHHHHHH
Confidence                  88887754    48999999999988777777777              676 999999999999999999999


Q ss_pred             HHHhccC-----CceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCC
Q psy14567        127 TMIDHKI-----QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPA  201 (238)
Q Consensus       127 ~~~~~~~-----~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~  201 (238)
                      .|.+++.     .|+||++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|+| .  .. ++
T Consensus       164 ~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~~-~~  239 (291)
T 1e7w_A          164 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--MP-PA  239 (291)
T ss_dssp             HHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--SC-HH
T ss_pred             HHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--CC-HH
Confidence            9976541     48999999999999989999999999999999999999999999999999999999999 4  22 33


Q ss_pred             ccCCcccCCCCC-CcCCCCCcccccccccccc
Q psy14567        202 KAGPMLAKTPLG-RFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       202 ~~~~~~~~~~~~-r~~~~~~ia~~~~~l~s~~  232 (238)
                      ....+....|++ |+++|+|+|++++||+|+.
T Consensus       240 ~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~  271 (291)
T 1e7w_A          240 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSK  271 (291)
T ss_dssp             HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCc
Confidence            333344567888 9999999999999999874

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.9e-42  Score=278.81  Aligned_cols=223  Identities=28%  Similarity=0.362  Sum_probs=189.1

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----c
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      ...+.++++||||+||||++++++|+++|++|++++|+.++++++.++    ..++.++.+|++|++++++++++    +
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            344567899999999999999999999999999999998876654433    34688899999999998887754    4


Q ss_pred             CCccEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHH
Q psy14567         80 GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        80 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      |++|++|||||+.. ..++.+.+.++ |++++++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|+++
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~-~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  167 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEV-WDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPFPNLGPYNVS  167 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCCCCCchhHHHH
Confidence            89999999999864 35666777787 999999999999999999999998776 6899999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++++++++++.|++++||++|+|+||+++|++....+..++....+....|++|+++|+|+|+++.||+++.
T Consensus       168 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~  241 (260)
T 2zat_A          168 KTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSED  241 (260)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999986532212221122334568899999999999999999874

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=2.7e-42  Score=275.99  Aligned_cols=217  Identities=20%  Similarity=0.308  Sum_probs=186.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++++++.++    ..++.++++|++|++++++++++    +|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            457889999999999999999999999999999998887665543    34688899999999999888764    4899


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++  |+||++||..+..+.++...|++||+++
T Consensus        86 d~lv~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~asK~a~  162 (247)
T 2jah_A           86 DILVNNAGIMLLGPVEDADTTD-WTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGRVNVRNAAVYQATKFGV  162 (247)
T ss_dssp             SEEEECCCCCCCCCSTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCchhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEccHHhcCCCCCCcHHHHHHHHH
Confidence            9999999988777788888888 999999999999999999999998765  8999999999998889999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCc--CCCCCccccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRF--AGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~--~~~~~ia~~~~~l~s~~~  233 (238)
                      ++|+++++.|++++||+||+|+||+++|+|..... .++. .......| +|+  ++|+|+|+.++||+++..
T Consensus       163 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~-~~~~~~~~-~~~~~~~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          163 NAFSETLRQEVTERGVRVVVIEPGTTDTELRGHIT-HTAT-KEMYEQRI-SQIRKLQAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCC-CHHH-HHHHHHHT-TTSCCBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHhcccCcEEEEEECCCCCCcchhccc-chhh-HHHHHhcc-cccCCCCHHHHHHHHHHHhCCCc
Confidence            99999999999999999999999999999975432 1111 11112234 666  899999999999998753

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=9.7e-43  Score=279.99  Aligned_cols=219  Identities=26%  Similarity=0.292  Sum_probs=188.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      ++++||||+||||++++++|+++|++|++++|+.++++++.++    ..++.++++|++|++++++++++    +|++|+
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   82 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5789999999999999999999999999999998876655443    34688899999999999887764    489999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++..|+||++||..+..+.++...|++||+++++
T Consensus        83 lv~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  161 (256)
T 1geg_A           83 IVNNAGVAPSTPIESITPEI-VDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  161 (256)
T ss_dssp             EEECCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHH
Confidence            99999988767777788888 99999999999999999999999876434899999999998888889999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCC---------CCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW---------SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++.|++++||+||+|+||+++|++.....         ..++....+....|++|+++|+|+|+++.||+++.
T Consensus       162 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~  238 (256)
T 1geg_A          162 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPD  238 (256)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999854310         01122223345578999999999999999999874

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=3e-42  Score=285.22  Aligned_cols=223  Identities=25%  Similarity=0.334  Sum_probs=187.6

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC------------hHhHHHH----HhhCCCceEEEeecCCHHH
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT------------QANLDSL----KQAFPNVQTVQVDLQDWAR   71 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~------------~~~~~~~----~~~~~~~~~~~~D~~~~~~   71 (238)
                      ...+.++++||||++|||+++|++|+++|++|++++|+            .+.+++.    .+....+.++++|++|+++
T Consensus        42 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~  121 (317)
T 3oec_A           42 NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS  121 (317)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            34456789999999999999999999999999999876            4444443    3334578899999999999


Q ss_pred             HHHHHHh----cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc
Q psy14567         72 TRAAVSK----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT  147 (238)
Q Consensus        72 v~~~~~~----~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  147 (238)
                      +++++++    +|++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++..|+||++||..+..
T Consensus       122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~  200 (317)
T 3oec_A          122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQ-WSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR  200 (317)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence            9888765    48999999999998878888888888 999999999999999999999998875468999999999999


Q ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCC---------CCCCCc---c--CCcccCCCCC
Q psy14567        148 ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG---------WSDPAK---A--GPMLAKTPLG  213 (238)
Q Consensus       148 ~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~---------~~~~~~---~--~~~~~~~~~~  213 (238)
                      +.++...|++||+++++|+++++.|++++||+||+|+||+++|++....         ...+..   .  .......| +
T Consensus       201 ~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~  279 (317)
T 3oec_A          201 GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP-I  279 (317)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-S
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCC-C
Confidence            9999999999999999999999999999999999999999999985320         001100   0  01233445 8


Q ss_pred             CcCCCCCcccccccccccc
Q psy14567        214 RFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       214 r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++|+|+|++++||+|+.
T Consensus       280 ~~~~pedvA~av~fL~s~~  298 (317)
T 3oec_A          280 PWVEPEDVSNAVAWLASDE  298 (317)
T ss_dssp             SSBCHHHHHHHHHHHTSGG
T ss_pred             CCCCHHHHHHHHHHHcCCc
Confidence            8999999999999999984

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=4.1e-42  Score=276.91  Aligned_cols=219  Identities=18%  Similarity=0.297  Sum_probs=185.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----C-CceEEEeecCCHHHHHHHHHhc----C
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----P-NVQTVQVDLQDWARTRAAVSKV----G   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~-~~~~~~~D~~~~~~v~~~~~~~----g   80 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++++++.++.     + ++.++++|++|+++++++++++    |
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4568899999999999999999999999999999988776654432     2 6888999999999998887654    7


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                       +|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|+++|+
T Consensus        86 -id~lv~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  162 (260)
T 2z1n_A           86 -ADILVYSTGGPRPGRFMELGVED-WDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPWQDLALSNIMRL  162 (260)
T ss_dssp             -CSEEEECCCCCCCBCGGGCCHHH-HHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHTH
T ss_pred             -CCEEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCCchhHHHHH
Confidence             99999999987767777788887 999999999999999999999998776 689999999999888888999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC--------CCCCc-cCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW--------SDPAK-AGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~--------~~~~~-~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++++++++++.+++++||++|+|+||+++|++.....        ..++. ...+....|++|+++|+|+|+++.||+++
T Consensus       163 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~  242 (260)
T 2z1n_A          163 PVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASE  242 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999865210        01111 33445567999999999999999999987


Q ss_pred             c
Q psy14567        232 V  232 (238)
Q Consensus       232 ~  232 (238)
                      .
T Consensus       243 ~  243 (260)
T 2z1n_A          243 K  243 (260)
T ss_dssp             G
T ss_pred             c
Confidence            4

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=1.6e-42  Score=281.55  Aligned_cols=219  Identities=20%  Similarity=0.237  Sum_probs=188.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+.+.++++.++.   +++.++++|++|++++++++++    +|++
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            45678999999999999999999999999999999998877665543   2578889999999999887765    4899


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC----ceEEEEccccccccCCCCc-hhhH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ----GSIVNVSSIAGKTALEGHT-IYSA  157 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~----g~iv~isS~~~~~~~~~~~-~y~~  157 (238)
                      |++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .    |+||++||..+..+.++.. .|++
T Consensus       107 D~lvnnAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~~~~g~iV~isS~~~~~~~~~~~~~Y~a  184 (276)
T 2b4q_A          107 DILVNNAGTSWGAALESYPVSG-WEKVMQLNVTSVFSCIQQLLPLLRRSA-SAENPARVINIGSVAGISAMGEQAYAYGP  184 (276)
T ss_dssp             SEEEECCCCCCCCCTTSCCSHH-HHHHHHHHTHHHHHHHHHHHHHHHHHC-CSSSCEEEEEECCGGGTCCCCCSCTTHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcc-CCCCCCEEEEECCHHHcCCCCCCccccHH
Confidence            9999999988777778888888 999999999999999999999998765 4    8999999999988877777 9999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCccc--CCCCCCcCCCCCcccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLA--KTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~--~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ||+++++++++++.|++++||+||+|+||+++|++......  +....+..  ..|++|+++|+|+|++++||+++.
T Consensus       185 sK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~  259 (276)
T 2b4q_A          185 SKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAN--DPQALEADSASIPMGRWGRPEEMAALAISLAGTA  259 (276)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHH--CHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcch--hHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999998643211  11122223  578999999999999999999874

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.1e-41  Score=269.53  Aligned_cols=212  Identities=16%  Similarity=0.206  Sum_probs=179.4

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhcC-CccEEEEcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKVG-PVDVLINNA   89 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~g-~id~li~~a   89 (238)
                      +++++||||++|||++++++|+++|++|++++|+.+.++++.++. .++.++.+|++++++++++++++. .+|++||||
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A   80 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA   80 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence            468999999999999999999999999999999999998887776 358899999999999999999873 459999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHH
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTM  169 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l  169 (238)
                      |+....++.+.+.++ |++.+++|+.+++.++++++|.+.+++  ++||++||..+..+.++...|++||+++++|++++
T Consensus        81 g~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l  157 (230)
T 3guy_A           81 GSGYFGLLQEQDPEQ-IQTLIENNLSSAINVLRELVKRYKDQP--VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESV  157 (230)
T ss_dssp             CCCCCSCGGGSCHHH-HHHHHHHHHHHHHHHHHHHHHHHTTSC--CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCccccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEeecccCCCCCCCchhHHHHHHHHHHHHHH
Confidence            998878888888888 999999999999999999999998765  59999999999999999999999999999999999


Q ss_pred             HHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccccccc
Q psy14567        170 ALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLNW  236 (238)
Q Consensus       170 ~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~~~  236 (238)
                      +.|++++||+||+|+||+++|++.....          ...|.+|+.+|+|+|+.+.|++++..-.|
T Consensus       158 a~e~~~~gi~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~~~dvA~~i~~l~~~~~~~~  214 (230)
T 3guy_A          158 RLELKGKPMKIIAVYPGGMATEFWETSG----------KSLDTSSFMSAEDAALMIHGALANIGNGY  214 (230)
T ss_dssp             HHHTTTSSCEEEEEEECCC--------------------------CCCHHHHHHHHHHHCCEETTEE
T ss_pred             HHHHHhcCeEEEEEECCcccChHHHhcC----------CCCCcccCCCHHHHHHHHHHHHhCcCCCC
Confidence            9999999999999999999999875421          22367899999999999999998755443

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=1.2e-42  Score=280.44  Aligned_cols=220  Identities=22%  Similarity=0.272  Sum_probs=188.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh-----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA-----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++++++.++     ..++.++++|++|++++++++++    +|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            456889999999999999999999999999999998877665443     44688899999999999888764    489


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||++
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a  163 (263)
T 3ai3_A           86 ADILVNNAGTGSNETIMEAADEK-WQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPLWYEPIYNVTKAA  163 (263)
T ss_dssp             CSEEEECCCCCCCCCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCCCcchHHHHHHH
Confidence            99999999988777788888888 999999999999999999999998776 6899999999998888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC---------CCCccCCcccC-CCCCCcCCCCCccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS---------DPAKAGPMLAK-TPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~---------~~~~~~~~~~~-~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +++++++++.|++++||++|+|+||+++|++......         .++....+... .|++|+++|+|+|++++||+++
T Consensus       164 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~  243 (263)
T 3ai3_A          164 LMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSE  243 (263)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHHTST
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999998543110         01111222233 7899999999999999999987


Q ss_pred             c
Q psy14567        232 V  232 (238)
Q Consensus       232 ~  232 (238)
                      .
T Consensus       244 ~  244 (263)
T 3ai3_A          244 R  244 (263)
T ss_dssp             T
T ss_pred             c
Confidence            4

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=2.5e-42  Score=281.09  Aligned_cols=222  Identities=16%  Similarity=0.141  Sum_probs=195.0

Q ss_pred             CCCCcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCCh--HhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----
Q psy14567          8 HPDRTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKTQ--ANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----   79 (238)
Q Consensus         8 ~~~~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----   79 (238)
                      ...+.++++||||+  +|||+++|++|+++|++|++++|+.  +.++++.+..+++.++++|++++++++++++++    
T Consensus        22 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (280)
T 3nrc_A           22 GFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW  101 (280)
T ss_dssp             CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc
Confidence            33456789999998  7899999999999999999999988  778888777778999999999999998888654    


Q ss_pred             CCccEEEEccCCCCC----CCCCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCch
Q psy14567         80 GPVDVLINNAAVARF----DRFLD-IDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTI  154 (238)
Q Consensus        80 g~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  154 (238)
                      +++|++|||||+...    .++.+ .+.++ |++.+++|+.+++.++++++|.|.++  .|+||++||..+..+.++...
T Consensus       102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  178 (280)
T 3nrc_A          102 DGLDAIVHSIAFAPRDQLEGNFIDCVTREG-FSIAHDISAYSFAALAKEGRSMMKNR--NASMVALTYIGAEKAMPSYNT  178 (280)
T ss_dssp             SSCCEEEECCCCCCGGGSSSCHHHHCCHHH-HHHHHHHHTHHHHHHHHHHHHHHTTT--TCEEEEEECGGGTSCCTTTHH
T ss_pred             CCCCEEEECCccCCCcccCCccccccCHHH-HHHHHHHHHHHHHHHHHHHHHHhhcC--CCeEEEEeccccccCCCCchh
Confidence            899999999998754    33444 66777 99999999999999999999999765  589999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.......++.........|++|+.+|+|+|++++||+++.
T Consensus       179 Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~  256 (280)
T 3nrc_A          179 MGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDM  256 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999998765433444555666789999999999999999999974

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1.1e-41  Score=274.75  Aligned_cols=216  Identities=25%  Similarity=0.254  Sum_probs=179.7

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----   79 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----   79 (238)
                      ...+.++++||||+||||+++|++|+++|++|++++|+.+.++++.++    ...+.++.+|++++++++++++++    
T Consensus        25 ~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~  104 (262)
T 3rkr_A           25 SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH  104 (262)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence            334567899999999999999999999999999999999887765544    356889999999999998887654    


Q ss_pred             CCccEEEEccCC-CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHH
Q psy14567         80 GPVDVLINNAAV-ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        80 g~id~li~~ag~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      |++|++|||||+ ....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|+++
T Consensus       105 g~id~lv~~Ag~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  182 (262)
T 3rkr_A          105 GRCDVLVNNAGVGWFGGPLHTMKPAE-WDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNPVADGAAYTAS  182 (262)
T ss_dssp             SCCSEEEECCCCCCCSSCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCCCTTCHHHHHH
T ss_pred             CCCCEEEECCCccCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCCCCCCchHHHH
Confidence            899999999998 4455677778887 999999999999999999999998876 7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLN  235 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~~  235 (238)
                      |+++++|+++++.+++++||++|+|+||+++|++.....          ...+..++.+|+|+|++++||+++....
T Consensus       183 Kaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----------~~~~~~~~~~p~dvA~~v~~l~s~~~~~  249 (262)
T 3rkr_A          183 KWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS----------AKKSALGAIEPDDIADVVALLATQADQS  249 (262)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------CCCHHHHHHHHHHHHTCCTTC
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc----------cccccccCCCHHHHHHHHHHHhcCcccc
Confidence            999999999999999999999999999999999865421          1235678889999999999999986543

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1e-41  Score=273.44  Aligned_cols=216  Identities=25%  Similarity=0.331  Sum_probs=157.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.+.++++.++    .+.+.++++|++|+++++++++++    +++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999999999999887766544    356889999999999998887654    899


Q ss_pred             cEEEEccCCC---CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         83 DVLINNAAVA---RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        83 d~li~~ag~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      |++|||||+.   ...++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+.   ++...|++||
T Consensus        88 d~li~~Ag~~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~---~~~~~Y~asK  162 (253)
T 3qiv_A           88 DYLVNNAAIFGGMKLDFLLTIDPEY-YKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAW---LYSNYYGLAK  162 (253)
T ss_dssp             CEEEECCCCCCGGGGGCTTTSCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC--------------CCH
T ss_pred             CEEEECCCcCCCCCCcccccCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc---CCCchhHHHH
Confidence            9999999984   445567778888 999999999999999999999998877 7899999999876   4467899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++|+++++.|++++||++|+|+||+++|++..... .++....+....|++|+++|+|+|+++.||+++.
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  234 (253)
T 3qiv_A          163 VGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT-PKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDE  234 (253)
T ss_dssp             HHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------CCHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC-cHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999876532 3455566777889999999999999999999874

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-42  Score=277.62  Aligned_cols=222  Identities=25%  Similarity=0.362  Sum_probs=191.5

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEec-CChHhH----HHHHhhCCCceEEEeecCCHHHHHHHHHhc--
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALS-KTQANL----DSLKQAFPNVQTVQVDLQDWARTRAAVSKV--   79 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~-r~~~~~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--   79 (238)
                      .+..+.++++||||++|||+++|++|+++|++|++++ |+.+..    +++.+...++.++++|++|+++++++++++  
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            4456778999999999999999999999999999887 554443    334444457889999999999998887654  


Q ss_pred             --CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhH
Q psy14567         80 --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSA  157 (238)
Q Consensus        80 --g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~  157 (238)
                        |++|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++
T Consensus        88 ~~g~id~lv~~Ag~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  165 (256)
T 3ezl_A           88 EVGEIDVLVNNAGITRDVVFRKMTRED-WQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQFGQTNYST  165 (256)
T ss_dssp             HTCCEEEEEECCCCCCCCCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGSCSCCHHHHH
T ss_pred             hcCCCCEEEECCCCCCCCchhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccCCCCCcccHH
Confidence              8999999999998877888888888 999999999999999999999998877 699999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ||+++++|+++++.|++++||++|+|+||+++|++.+..  .++....+....|++|+++|+|+|+++.||+|+.
T Consensus       166 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  238 (256)
T 3ezl_A          166 AKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEE  238 (256)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCc
Confidence            999999999999999999999999999999999997653  3344455566789999999999999999999874

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3e-41  Score=271.87  Aligned_cols=213  Identities=28%  Similarity=0.373  Sum_probs=188.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++.+++.++.. .+.++++|++|++++++++++    +|++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            45688999999999999999999999999999999988877766553 377889999999999887764    4899999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|+++|++++++
T Consensus        86 v~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  163 (260)
T 1nff_A           86 VNNAGILNIGTIEDYALTE-WQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYTATKFAVRGL  163 (260)
T ss_dssp             EECCCCCCCBCTTTSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCCCCchhHHHHHHHHHHH
Confidence            9999988777778888888 999999999999999999999998876 68999999999988888889999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++.+++++||++|+|+||+++|++..  ...+.    +. ..|++|+.+|+|+|+++.||+++.
T Consensus       164 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~~~----~~-~~~~~~~~~~~dvA~~v~~l~s~~  223 (260)
T 1nff_A          164 TKSTALELGPSGIRVNSIHPGLVKTPMTD--WVPED----IF-QTALGRAAEPVEVSNLVVYLASDE  223 (260)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCSGGGT--TSCTT----CS-CCSSSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHhCccCcEEEEEEeCCCCCCccc--cchhh----HH-hCccCCCCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999864  11111    11 568899999999999999999874

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=6.3e-42  Score=278.38  Aligned_cols=218  Identities=25%  Similarity=0.315  Sum_probs=181.5

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC------------hHhHHHH----HhhCCCceEEEeecCCHHHH
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT------------QANLDSL----KQAFPNVQTVQVDLQDWART   72 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~------------~~~~~~~----~~~~~~~~~~~~D~~~~~~v   72 (238)
                      ..+.++++||||++|||+++|++|+++|++|++++|+            .+.+++.    .....++.++++|++|++++
T Consensus        10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   89 (278)
T 3sx2_A           10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL   89 (278)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            3466789999999999999999999999999999987            5544443    33446789999999999999


Q ss_pred             HHHHHh----cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc
Q psy14567         73 RAAVSK----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA  148 (238)
Q Consensus        73 ~~~~~~----~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~  148 (238)
                      ++++++    +|++|++|||||+.....    +.++ |++++++|+.+++.++++++|.|.+++..|+||++||..+..+
T Consensus        90 ~~~~~~~~~~~g~id~lv~nAg~~~~~~----~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (278)
T 3sx2_A           90 SAALQAGLDELGRLDIVVANAGIAPMSA----GDDG-WHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAG  164 (278)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCCSS----THHH-HHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCC----CHHH-HHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCC
Confidence            888765    489999999999875433    3565 9999999999999999999999988754689999999998876


Q ss_pred             C----CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC---------CCCccCCcccCCCCCCc
Q psy14567        149 L----EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS---------DPAKAGPMLAKTPLGRF  215 (238)
Q Consensus       149 ~----~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~r~  215 (238)
                      .    ++...|++||+++++|+++++.|++++||+||+|+||+++|+|......         ..+....+....| +|+
T Consensus       165 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~  243 (278)
T 3sx2_A          165 VGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEV  243 (278)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSS
T ss_pred             CccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCc
Confidence            6    6677899999999999999999999999999999999999998753110         0111223445567 899


Q ss_pred             CCCCCcccccccccccc
Q psy14567        216 AGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       216 ~~~~~ia~~~~~l~s~~  232 (238)
                      .+|+|+|++++||+|+.
T Consensus       244 ~~p~dvA~~v~~l~s~~  260 (278)
T 3sx2_A          244 LAPEDVANAVAWLVSDQ  260 (278)
T ss_dssp             BCHHHHHHHHHHHTSGG
T ss_pred             CCHHHHHHHHHHHhCcc
Confidence            99999999999999874

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.3e-42  Score=281.08  Aligned_cols=217  Identities=26%  Similarity=0.340  Sum_probs=184.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC---EEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHhc--
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA---IIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSKV--   79 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~--   79 (238)
                      +.++++||||++|||+++|++|+++|+   +|++++|+.+.++++.++.      ..+.++++|++|+++++++++++  
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999988   9999999998877765542      35788999999999999998765  


Q ss_pred             --CCccEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         80 --GPVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        80 --g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                        |++|++|||||+.. ..++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|+
T Consensus       112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~  189 (287)
T 3rku_A          112 EFKDIDILVNNAGKALGSDRVGQIATED-IQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAYPTGSIYC  189 (287)
T ss_dssp             GGCSCCEEEECCCCCCCCCCTTSCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHH
T ss_pred             hcCCCCEEEECCCcCCCCCCcccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCCCCCCchHH
Confidence              78999999999875 56777888888 999999999999999999999998877 79999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-CC-ccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-PA-KAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-~~-~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      +||+|+++|+++++.|++++||+||+|+||+++|++....... ++ .........|    .+|+|+|++++||+|+..
T Consensus       190 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p----~~pedvA~~v~~l~s~~~  264 (287)
T 3rku_A          190 ASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTP----LMADDVADLIVYATSRKQ  264 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCC----EEHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCC----CCHHHHHHHHHHHhCCCC
Confidence            9999999999999999999999999999999999985432211 11 1111122223    389999999999999853

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=8.4e-42  Score=277.12  Aligned_cols=211  Identities=19%  Similarity=0.210  Sum_probs=179.5

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-------HH----HHHhhCCCceEEEeecCCHHHHHHHHHh
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-------LD----SLKQAFPNVQTVQVDLQDWARTRAAVSK   78 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~----~~~~~~~~~~~~~~D~~~~~~v~~~~~~   78 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+.       ++    ++.....++.++++|++|++++++++++
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            356789999999999999999999999999999998642       22    3334455788999999999999888765


Q ss_pred             c----CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc--CCCC
Q psy14567         79 V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA--LEGH  152 (238)
Q Consensus        79 ~----g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~  152 (238)
                      +    |++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+  .++.
T Consensus        84 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~  161 (274)
T 3e03_A           84 TVDTFGGIDILVNNASAIWLRGTLDTPMKR-FDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAWWGAH  161 (274)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGSCHHH-HHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHHHHHHC
T ss_pred             HHHHcCCCCEEEECCCcccCCCcccCCHHH-HHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCCCCCC
Confidence            4    8999999999998777888888888 999999999999999999999998876 789999999998877  6778


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCC-ceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPT-VVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ..|++||+++++|+++++.|++++||+||+|+|| +++|+|....           ...+..++.+|+|+|++++||+|+
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~-----------~~~~~~~~~~pedvA~~v~~l~s~  230 (274)
T 3e03_A          162 TGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINML-----------PGVDAAACRRPEIMADAAHAVLTR  230 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------CCCGGGSBCTHHHHHHHHHHHTS
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhc-----------ccccccccCCHHHHHHHHHHHhCc
Confidence            8999999999999999999999999999999999 6999986321           122456688999999999999998


Q ss_pred             cc
Q psy14567        232 VG  233 (238)
Q Consensus       232 ~~  233 (238)
                      ..
T Consensus       231 ~~  232 (274)
T 3e03_A          231 EA  232 (274)
T ss_dssp             CC
T ss_pred             cc
Confidence            43

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-42  Score=279.37  Aligned_cols=219  Identities=21%  Similarity=0.313  Sum_probs=189.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      .+.++++||||++|||++++++|+++|++|++++|+++..+++.++.+.+.++++|++|++++++++++    +|++|++
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   86 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   86 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            456789999999999999999999999999999999999888888777788999999999999887764    4899999


Q ss_pred             EEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         86 INNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        86 i~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      |||||+... .++.+.+.++ |++.+++|+.+++.++++++|.|.++  .|+||++||..+..+.++...|+++|+++++
T Consensus        87 v~nAg~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  163 (270)
T 1yde_A           87 VNNAGHHPPPQRPEETSAQG-FRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAIGQAQAVPYVATKGAVTA  163 (270)
T ss_dssp             EECCCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcCccccCCCCCCcccHHHHHHHHH
Confidence            999998653 5666777887 99999999999999999999999765  4899999999988888889999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC-CCCc---cCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-DPAK---AGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-~~~~---~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++++++.|++++||++|+|+||+++|++...... .++.   ........|++|+++|+|+|+++.||+|+
T Consensus       164 ~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~  234 (270)
T 1yde_A          164 MTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE  234 (270)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc
Confidence            9999999999999999999999999998643111 1111   11112457999999999999999999987

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=2.5e-41  Score=270.55  Aligned_cols=215  Identities=22%  Similarity=0.345  Sum_probs=176.2

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhc----CCccEEEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV----GPVDVLIN   87 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~----g~id~li~   87 (238)
                      ++++||||++|||++++++|+++|++|++++|+.++++++.++. .++.++++|++|+++++++++++    |++|++||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            36789999999999999999999999999999998888776654 36888999999999999998764    78999999


Q ss_pred             ccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         88 NAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        88 ~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      |||+.. ..++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+++++|+
T Consensus        81 nAg~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~  158 (248)
T 3asu_A           81 NAGLALGMEPAHKASVED-WETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFS  158 (248)
T ss_dssp             CCCCCCCCSCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCchhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccCCCCCchHHHHHHHHHHHH
Confidence            999863 45667778887 999999999999999999999998776 689999999999988889999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCcee-cCcccCCCC-CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVM-TQMGRTGWS-DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~-t~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.|++++||+||+|+||+++ |++...... .++....   ..+..+..+|+|+|+.++||+|+.
T Consensus       159 ~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~---~~~~~~~~~p~dvA~~v~~l~s~~  223 (248)
T 3asu_A          159 LNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEK---TYQNTVALTPEDVSEAVWWVSTLP  223 (248)
T ss_dssp             HHHHHHTTTSCCEEEEEEECSBCC-------------------------CCBCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHH---HHhccCCCCHHHHHHHHHHHhcCC
Confidence            99999999999999999999999 998643211 1111111   111223469999999999999974

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4e-42  Score=279.87  Aligned_cols=220  Identities=26%  Similarity=0.288  Sum_probs=187.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----C---CceEEEeecCCHHHHHHHHHh----
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----P---NVQTVQVDLQDWARTRAAVSK----   78 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~---~~~~~~~D~~~~~~v~~~~~~----   78 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.++++++.++.    .   ++.++++|++|++++++++++    
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            34568899999999999999999999999999999998776654432    2   578899999999999887764    


Q ss_pred             cCCccEEEEccCCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-CCCc
Q psy14567         79 VGPVDVLINNAAVARFDR----FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-EGHT  153 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~  153 (238)
                      +|++|++|||||+....+    +.+.+.++ |++.+++|+.+++.++++++|.|.+++  |+||++||..+..+. ++..
T Consensus        84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~  160 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDI-YHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQAQPDFL  160 (280)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSSSCCCSSH
T ss_pred             cCCCCEEEECCCCCCCCCCCcccccCCHHH-HHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEEecCccccCCCCCccc
Confidence            489999999999876555    66777777 999999999999999999999998664  899999999988877 8889


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-------CCccCCcccCCCCCCcCCCCCcccccc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-------PAKAGPMLAKTPLGRFAGKLKPKPWNR  226 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~r~~~~~~ia~~~~  226 (238)
                      .|++||+++++++++++.|++++||++|+|+||+++|++.......       ++....+....|++|+++|+|+|++++
T Consensus       161 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~  240 (280)
T 1xkq_A          161 YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL  240 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999986543101       112223445579999999999999999


Q ss_pred             cccccc
Q psy14567        227 WLLPSV  232 (238)
Q Consensus       227 ~l~s~~  232 (238)
                      ||+++.
T Consensus       241 ~l~s~~  246 (280)
T 1xkq_A          241 FLADRN  246 (280)
T ss_dssp             HHHCHH
T ss_pred             HhcCcc
Confidence            999864

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=1.1e-41  Score=272.91  Aligned_cols=214  Identities=24%  Similarity=0.314  Sum_probs=169.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~li   86 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.+.     +.. .+..+.+|++|++++++++++    +|++|++|
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~-~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQY-PFATEVMDVADAAQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCC-SSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcC-CceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            44678999999999999999999999999999998752     122 378899999999999888764    48999999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||+....++.+.+.++ |++.+++|+.+++.++++++|.|++++ .|+||++||..+..+.++...|+++|+++++++
T Consensus        80 ~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  157 (250)
T 2fwm_X           80 NAAGILRMGATDQLSKED-WQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTPRIGMSAYGASKAALKSLA  157 (250)
T ss_dssp             ECCCCCCCCCTTTSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             ECCCcCCCCCcccCCHHH-HHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCCCCchHHHHHHHHHHHH
Confidence            999988777778888888 999999999999999999999998876 689999999999988889999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccC-Cccc-------CCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAG-PMLA-------KTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~-~~~~-------~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.|++++||++|+|+||+++|++.......++... .+..       ..|++|+++|+|+|++++||+++.
T Consensus       158 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~  231 (250)
T 2fwm_X          158 LSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDL  231 (250)
T ss_dssp             HHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHHSGG
T ss_pred             HHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999998654321222112 2222       578999999999999999999974

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=3.9e-42  Score=281.33  Aligned_cols=218  Identities=22%  Similarity=0.256  Sum_probs=186.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-HHHH----HhhCCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-LDSL----KQAFPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+. .+.+    .+...++.++++|++|++++++++++    +|
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            456789999999999999999999999999999998753 2222    22334688999999999998887754    48


Q ss_pred             CccEEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         81 PVDVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        81 ~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      ++|++|||||+... .++.+.+.++ |++.+++|+.+++.++++++|+|++   .|+||++||..+..+.++...|++||
T Consensus       125 ~iD~lvnnAg~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asK  200 (291)
T 3ijr_A          125 SLNILVNNVAQQYPQQGLEYITAEQ-LEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAYEGNETLIDYSATK  200 (291)
T ss_dssp             SCCEEEECCCCCCCCSSGGGCCHHH-HHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEechHhcCCCCCChhHHHHH
Confidence            99999999998643 4566778887 9999999999999999999999854   57999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++|+++++.|++++||+||+|+||+++|++..... .++....+....|++|+++|+|+|++++||+|+.
T Consensus       201 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~  272 (291)
T 3ijr_A          201 GAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF-DEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSD  272 (291)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS-CHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC-CHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCc
Confidence            99999999999999999999999999999999865432 2233344566789999999999999999999984

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-42  Score=274.04  Aligned_cols=218  Identities=23%  Similarity=0.219  Sum_probs=189.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++++++.++. .++.++++|++|++++++++++    +|++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4567899999999999999999999999999999998887776553 4688899999999999887765    4899999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++  |+||++||..+..+.++...|++||++++++
T Consensus        85 v~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  161 (253)
T 1hxh_A           85 VNNAGILLPGDMETGRLED-FSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPIEQYAGYSASKAAVSAL  161 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCCcccCCHHH-HHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCCCCCccHHHHHHHHHHH
Confidence            9999988777778888888 999999999999999999999998664  8999999999998888899999999999999


Q ss_pred             HHHHHHHhCCC--CeEEEEEeCCceecCcccCCCCCCCccCC-ccc---CCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPY--NIRVNSVQPTVVMTQMGRTGWSDPAKAGP-MLA---KTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~--~i~v~~i~PG~v~t~~~~~~~~~~~~~~~-~~~---~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++.|++++  ||++|+|+||+++|++...... ++.... +..   ..|++|+.+|+|+|++++||+++.
T Consensus       162 ~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~  233 (253)
T 1hxh_A          162 TRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLP-KGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDE  233 (253)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSC-TTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccc-hhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCcc
Confidence            99999999888  9999999999999998654211 122112 223   568999999999999999999874

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-42  Score=277.90  Aligned_cols=215  Identities=23%  Similarity=0.288  Sum_probs=185.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++++++.++. .++.++++|++|++++++++++    +|++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            4568899999999999999999999999999999999888887766 3688899999999999887765    4899999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||+....++.+.+.++ |++++++|+.+++.++++++|.| ++  .|+||++||..+. +.++...|++||++++++
T Consensus        85 vnnAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~-~~--~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~  159 (263)
T 2a4k_A           85 AHFAGVAHSALSWNLPLEA-WEKVLRVNLTGSFLVARKAGEVL-EE--GGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGL  159 (263)
T ss_dssp             EEGGGGTTTTC----CHHH-HHHHHHHHHHHHHHHHHHHHHHC-CT--TCEEEEECCCTTC-CHHHHHHHHHCSSHHHHH
T ss_pred             EECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHH-hc--CCEEEEEecchhc-CCCCcHHHHHHHHHHHHH
Confidence            9999988777778888888 99999999999999999999999 43  5899999999988 777788999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++.|++++||++|+|+||+++|++....  .++....+....|++|+.+|+|+|++++||+++.
T Consensus       160 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~  224 (263)
T 2a4k_A          160 ARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEE  224 (263)
T ss_dssp             HHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHhhhhCcEEEEEEeCcCcCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999997542  2222223345678999999999999999999874

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-42  Score=279.64  Aligned_cols=222  Identities=18%  Similarity=0.162  Sum_probs=188.5

Q ss_pred             eCCCCcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCChH---hHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--
Q psy14567          7 LHPDRTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKTQA---NLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--   79 (238)
Q Consensus         7 l~~~~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--   79 (238)
                      ....+.++++||||+  +|||+++|++|+++|++|++++|+..   .++++.+..+.+.++++|++|+++++++++++  
T Consensus         9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A            9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            455678899999999  99999999999999999999988854   35556666677899999999999998888654  


Q ss_pred             --CCccEEEEccCCCCC----CCCCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCC
Q psy14567         80 --GPVDVLINNAAVARF----DRFLD-IDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGH  152 (238)
Q Consensus        80 --g~id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  152 (238)
                        |++|++|||||+...    .++.+ .+.++ |++.+++|+.+++.++++++|.|.+   .|+||++||..+..+.++.
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~  164 (271)
T 3ek2_A           89 HWDSLDGLVHSIGFAPREAIAGDFLDGLTREN-FRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAERAIPNY  164 (271)
T ss_dssp             HCSCEEEEEECCCCCCGGGGSSCTTTTCCHHH-HHHHHHHHTTHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTT
T ss_pred             HcCCCCEEEECCccCccccccCccccccCHHH-HHHHHhhhHHHHHHHHHHHHHHhcc---CceEEEEeccccccCCCCc
Confidence              899999999998764    45555 77777 9999999999999999999998864   4799999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ..|++||+|+++|+++++.+++++||+||+|+||+++|+|.......++....+....|++|+.+|+|+|++++||+++.
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~  244 (271)
T 3ek2_A          165 NTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDL  244 (271)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999999997654323344455566789999999999999999999974

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.7e-42  Score=276.57  Aligned_cols=208  Identities=23%  Similarity=0.341  Sum_probs=181.9

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      .+.++++||||+||||+++|++|+++|++|++++|+.+..++     ..+.++++|++|++++++++++    +|++|++
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  100 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD-----PDIHTVAGDISKPETADRIVREGIERFGRIDSL  100 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS-----TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-----CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            456789999999999999999999999999999998764321     2578899999999999887764    4899999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc--cCCCCchhhHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT--ALEGHTIYSASKAALD  163 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~y~~sK~al~  163 (238)
                      |||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..  +..+...|++||++++
T Consensus       101 v~nAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~  178 (260)
T 3un1_A          101 VNNAGVFLAKPFVEMTQED-YDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMVGMPSALASLTKGGLN  178 (260)
T ss_dssp             EECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBTTCCCHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCCCCccHHHHHHHHHHH
Confidence            9999998877888888888 999999999999999999999998877 78999999988764  3455689999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLL  229 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~  229 (238)
                      +|+++++.|++++||+||+|+||+++|++...     +.........|++|+++|+|+|++++||.
T Consensus       179 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-----~~~~~~~~~~p~~r~~~~~dva~av~~L~  239 (260)
T 3un1_A          179 AVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA-----ETHSTLAGLHPVGRMGEIRDVVDAVLYLE  239 (260)
T ss_dssp             HHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG-----GGHHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH-----HHHHHHhccCCCCCCcCHHHHHHHHHHhc
Confidence            99999999999999999999999999998643     23334456679999999999999999993

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-41  Score=279.35  Aligned_cols=219  Identities=26%  Similarity=0.297  Sum_probs=187.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CC---CceEEEeecCCHHHHHHHHHh----c
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FP---NVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~---~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.++++++.++    ..   ++.++++|++|++++++++++    +
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            456889999999999999999999999999999999877665443    23   678899999999999887764    4


Q ss_pred             CCccEEEEccCCCCCCC--CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-CCCchhh
Q psy14567         80 GPVDVLINNAAVARFDR--FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-EGHTIYS  156 (238)
Q Consensus        80 g~id~li~~ag~~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~~y~  156 (238)
                      |++|++|||||+....+  +.+.+.++ |++++++|+.+++.++++++|.|.+++  |+||++||..+..+. ++...|+
T Consensus       105 g~iD~lvnnAG~~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~isS~~~~~~~~~~~~~Y~  181 (297)
T 1xhl_A          105 GKIDILVNNAGANLADGTANTDQPVEL-YQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAGPQAHSGYPYYA  181 (297)
T ss_dssp             SCCCEEEECCCCCCCCSCCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGSSSCCTTSHHHH
T ss_pred             CCCCEEEECCCcCcCCCCccccCCHHH-HHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEEcCchhccCCCCCcchHH
Confidence            89999999999876555  67778887 999999999999999999999998754  899999999988877 8889999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-------CCccCCcccCCCCCCcCCCCCccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-------PAKAGPMLAKTPLGRFAGKLKPKPWNRWLL  229 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~  229 (238)
                      ++|+++++++++++.|++++||+||+|+||+++|++.......       ++....+....|++|+++|+|+|++++||+
T Consensus       182 asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l~  261 (297)
T 1xhl_A          182 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA  261 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999986543111       112223345579999999999999999999


Q ss_pred             ccc
Q psy14567        230 PSV  232 (238)
Q Consensus       230 s~~  232 (238)
                      ++.
T Consensus       262 s~~  264 (297)
T 1xhl_A          262 DRN  264 (297)
T ss_dssp             CHH
T ss_pred             CCc
Confidence            864

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=4.8e-42  Score=276.92  Aligned_cols=223  Identities=28%  Similarity=0.313  Sum_probs=191.7

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      ..+.++++||||+||||++++++|+++|++|++++|+.+.++++.++.. ++.++++|++|++++++++++    +|++|
T Consensus         9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD   88 (263)
T 3ak4_A            9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFD   88 (263)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence            3456789999999999999999999999999999999988887776654 578899999999999887764    48999


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||+....++.+.+.++ |+..+++|+.+++.++++++|.|.+++..++||++||..+..+.++...|++||++++
T Consensus        89 ~lv~~Ag~~~~~~~~~~~~~~-~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  167 (263)
T 3ak4_A           89 LLCANAGVSTMRPAVDITDEE-WDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVF  167 (263)
T ss_dssp             EEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCcCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHH
Confidence            999999988767777788887 9999999999999999999999987653589999999999888888999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC-----C----CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW-----S----DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~-----~----~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++.|++++||++|+|+||+++|++.....     .    .++....+....|++|+++|+|+|++++||+++.
T Consensus       168 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~  245 (263)
T 3ak4_A          168 GWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDA  245 (263)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999854311     0    0122223345578999999999999999999874

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=7.5e-41  Score=267.44  Aligned_cols=213  Identities=20%  Similarity=0.266  Sum_probs=183.9

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeec--CCHHHHHHHHHh--
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDL--QDWARTRAAVSK--   78 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~--~~~~~v~~~~~~--   78 (238)
                      ...+.++++||||++|||++++++|+++|++|++++|+.++++++.+++     +...++.+|+  ++++++++++++  
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            3446788999999999999999999999999999999998877665443     4577888888  999998887755  


Q ss_pred             --cCCccEEEEccCCC-CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchh
Q psy14567         79 --VGPVDVLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIY  155 (238)
Q Consensus        79 --~g~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y  155 (238)
                        +|++|++|||||+. ...++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|
T Consensus        90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y  167 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGPRTPLEQLPDED-FMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGRANWGAY  167 (247)
T ss_dssp             HHHSCCSEEEECCCCCCCCSCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSCCTTCHHH
T ss_pred             HhCCCCCEEEECCccCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCCCCCcchh
Confidence              48999999999986 445677778888 999999999999999999999998776 7899999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGP-YNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~-~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|+++++|+++++.|+++ +||+||+|+||+++|+|........          +..+..+|+|+|+.++||+|+.
T Consensus       168 ~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~----------~~~~~~~p~dva~~~~~l~s~~  235 (247)
T 3i1j_A          168 GVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDE----------NPLNNPAPEDIMPVYLYLMGPD  235 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTS----------CGGGSCCGGGGTHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccccc----------CccCCCCHHHHHHHHHHHhCch
Confidence            99999999999999999976 8999999999999999875432211          2245679999999999999875

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=2e-41  Score=270.28  Aligned_cols=221  Identities=46%  Similarity=0.700  Sum_probs=194.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++++++.++.++..++++|++|++++++++++++++|++|||||
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            45678999999999999999999999999999999998888877776778889999999999999998889999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHH
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMA  170 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~  170 (238)
                      .....++.+.+.++ |+..+++|+.+++.+++++.|.|.+++..++||++||..+..+.++...|++||++++.++++++
T Consensus        86 ~~~~~~~~~~~~~~-~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la  164 (244)
T 3d3w_A           86 VALLQPFLEVTKEA-FDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMA  164 (244)
T ss_dssp             CCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcchhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHHHHHHHHH
Confidence            88766777777787 99999999999999999999999876435899999999998888888999999999999999999


Q ss_pred             HHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        171 LELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       171 ~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+++++||++|.|+||++.|++....+..+.....+....|++++.+|+|+|++++|++++.
T Consensus       165 ~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (244)
T 3d3w_A          165 LELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR  226 (244)
T ss_dssp             HHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999999986543222232233445678999999999999999999863

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=9.7e-43  Score=280.12  Aligned_cols=216  Identities=18%  Similarity=0.225  Sum_probs=179.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh---cCCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK---VGPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~---~g~id~li~   87 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.++..+  +....+.++++|++|+++++++++.   +|++|++||
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~   85 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVA--DLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVN   85 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHH--HTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHH--hcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence            45789999999999999999999999999999997654322  2235688999999999999887754   489999999


Q ss_pred             ccCCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------cCCceEEEEccccccccCCCCchhh
Q psy14567         88 NAAVARFDR----FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH-------KIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        88 ~ag~~~~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-------~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                      |||+....+    ..+.+.++ |++++++|+.+++.++++++|.|.++       +..|+||++||..+..+.++...|+
T Consensus        86 nAg~~~~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  164 (257)
T 3tl3_A           86 CAGTGNAIRVLSRDGVFSLAA-FRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYS  164 (257)
T ss_dssp             CGGGSHHHHHHHHTCCCSHHH-HHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHH
T ss_pred             CCCCCCCcccccccccCCHHH-HHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccHH
Confidence            999864322    23467777 99999999999999999999999872       2268999999999998888889999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCC-CCcCCCCCccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPL-GRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~ia~~~~~l~s~  231 (238)
                      +||+++++|+++++.|++++||+||+|+||+++|+|....  .++.........|+ +|+++|+|+|++++||+++
T Consensus       165 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~r~~~p~dva~~v~~l~s~  238 (257)
T 3tl3_A          165 ASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL--PEEARASLGKQVPHPSRLGNPDEYGALAVHIIEN  238 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTSSSSCSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc--cHHHHHHHHhcCCCCCCccCHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999997653  23333444566787 9999999999999999987

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=4.7e-42  Score=278.76  Aligned_cols=219  Identities=15%  Similarity=0.172  Sum_probs=187.3

Q ss_pred             CCcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCChH---hHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         10 DRTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKTQA---NLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        10 ~~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      .+.++++||||+  ||||++++++|+++|++|++++|+.+   .++++.+..+.+.++++|++|++++++++++    +|
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            345788999999  99999999999999999999999875   5556666555688999999999999888765    48


Q ss_pred             CccEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         81 PVDVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        81 ~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                      ++|++|||||+...    .++.+.+.++ |++.+++|+.+++.++++++|.|.+   +|+||++||..+..+.++...|+
T Consensus        84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~  159 (275)
T 2pd4_A           84 SLDFIVHSVAFAPKEALEGSLLETSKSA-FNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGSTKYMAHYNVMG  159 (275)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTCHHHH
T ss_pred             CCCEEEECCccCccccCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEecchhcCCCCCchhhH
Confidence            99999999998754    4666778887 9999999999999999999999863   47999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +||+++++++++++.+++++||+||+|+||+++|++.......++....+....|++|+++|+|+|+.++||+++.
T Consensus       160 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~  235 (275)
T 2pd4_A          160 LAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSL  235 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999987543211222223344578999999999999999999873

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=5.6e-41  Score=271.88  Aligned_cols=215  Identities=22%  Similarity=0.319  Sum_probs=177.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHhc----CCccEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSKV----GPVDVL   85 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~----g~id~l   85 (238)
                      ++++||||+||||++++++|+++|++|++++|+.++++++.++.   .++.++++|++|+++++++++++    |++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            78999999999999999999999999999999998887766554   36888999999999999998765    889999


Q ss_pred             EEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-eEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         86 INNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG-SIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        86 i~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      |||||+... .++.+.+.++ |++++++|+.+++.++++++|.|.+++ .| +||++||..+..+.++...|+++|++++
T Consensus       102 vnnAG~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~  179 (272)
T 2nwq_A          102 INNAGLALGTDPAQSCDLDD-WDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWPYPGSHVYGGTKAFVE  179 (272)
T ss_dssp             EECCCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EECCCCCCCCCCcccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccCCCCCchHHHHHHHHH
Confidence            999998753 6777788887 999999999999999999999998876 57 9999999999988888999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC-CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+++++.|++++||++|+|+||+++|+|...... ..+....   ..+..+..+|+|+|+.++||+++.
T Consensus       180 ~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~---~~~~~~~~~pedvA~~v~~l~s~~  246 (272)
T 2nwq_A          180 QFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDK---TYAGAHPIQPEDIAETIFWIMNQP  246 (272)
T ss_dssp             HHHHHHHTTCTTSCCEEEEEEECSBC-----------------------CCCCBCHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHH---hhccCCCCCHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999998653211 1111111   111223579999999999999974

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-41  Score=275.76  Aligned_cols=219  Identities=27%  Similarity=0.329  Sum_probs=176.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-------CCceEEEeecCCHHHHHHHHHh----c
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++++++.++.       .++.++++|++|++++++++++    +
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999999998877665443       2578899999999999887764    4


Q ss_pred             CCccEEEEccCCCCCCCCCCC----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccc-cccCCCCch
Q psy14567         80 GPVDVLINNAAVARFDRFLDI----DEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAG-KTALEGHTI  154 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~----~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-~~~~~~~~~  154 (238)
                      |++|++|||||+....++.+.    +.++ |++.+++|+.+++.++++++|.|.+++  |+||++||..+ ..+.++...
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~~  161 (278)
T 1spx_A           85 GKLDILVNNAGAAIPDSQSKTGTAQSIES-YDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATPDFPY  161 (278)
T ss_dssp             SCCCEEEECCC-------------CCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCCTTSHH
T ss_pred             CCCCEEEECCCCCCCcccccccccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccccCCCCccH
Confidence            899999999998766666666    7777 999999999999999999999997654  89999999998 778888899


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC-CCCc------cCCcccCCCCCCcCCCCCccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-DPAK------AGPMLAKTPLGRFAGKLKPKPWNRW  227 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-~~~~------~~~~~~~~~~~r~~~~~~ia~~~~~  227 (238)
                      |++||+++++++++++.|++++||++|+|+||+++|++...... .++.      ........|++|+++|+|+|++++|
T Consensus       162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~  241 (278)
T 1spx_A          162 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF  241 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999998653211 1111      1223345688999999999999999


Q ss_pred             ccccc
Q psy14567        228 LLPSV  232 (238)
Q Consensus       228 l~s~~  232 (238)
                      |+++.
T Consensus       242 l~s~~  246 (278)
T 1spx_A          242 LADRK  246 (278)
T ss_dssp             HHCHH
T ss_pred             HcCcc
Confidence            99864

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-41  Score=273.73  Aligned_cols=218  Identities=22%  Similarity=0.290  Sum_probs=179.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH-hHHHHHhhC----CCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA-NLDSLKQAF----PNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      .+++++||||++|||++++++|+++|++|++++|+.+ ..+.+.+..    .++.++++|++|+++++++++++    ++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4678999999999999999999999999999876644 344444433    35889999999999998888654    89


Q ss_pred             ccEEEEccC--CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccc-cc-cccCCCCchhhH
Q psy14567         82 VDVLINNAA--VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSI-AG-KTALEGHTIYSA  157 (238)
Q Consensus        82 id~li~~ag--~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~-~~-~~~~~~~~~y~~  157 (238)
                      +|++|||||  .....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .++||++||. .+ ..+.++...|++
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~~~Y~a  163 (264)
T 3i4f_A           86 IDFLINNAGPYVFERKKLVDYEEDE-WNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPGWIYRSAFAA  163 (264)
T ss_dssp             CCEEECCCCCCCCSCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCCCCTTCHHHHH
T ss_pred             CCEEEECCcccccCCCccccCCHHH-HHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccCCCCCCchhHH
Confidence            999999999  44556677788887 999999999999999999999998877 7899999998 43 456677899999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ||+++++|+++++.|++++||+||+|+||+++|++.....  ++.........|++|+++|+|+|++++||+++.
T Consensus       164 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~  236 (264)
T 3i4f_A          164 AKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI--QEARQLKEHNTPIGRSGTGEDIARTISFLCEDD  236 (264)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH--HHHHHC--------CCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc--HHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999999999976532  233344556789999999999999999999874

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=2.1e-41  Score=276.32  Aligned_cols=220  Identities=15%  Similarity=0.139  Sum_probs=185.9

Q ss_pred             CCcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCChH---hHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         10 DRTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKTQA---NLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        10 ~~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      .+.++++||||+  ||||++++++|+++|++|++++|+.+   .++++.+..+.+.++++|++|++++++++++    +|
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            345689999999  99999999999999999999999875   4555655555678899999999999887765    48


Q ss_pred             CccEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         81 PVDVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        81 ~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                      ++|++|||||+...    .++.+.+.++ |++.+++|+.+++.++++++|.|.++  +|+||++||..+..+.++...|+
T Consensus        99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  175 (285)
T 2p91_A           99 SLDIIVHSIAYAPKEEFKGGVIDTSREG-FKIAMDISVYSLIALTRELLPLMEGR--NGAIVTLSYYGAEKVVPHYNVMG  175 (285)
T ss_dssp             CCCEEEECCCCCCGGGGSSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHGGGGTTS--CCEEEEEECGGGTSBCTTTTHHH
T ss_pred             CCCEEEECCCCCCcccCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHc--CCEEEEEccchhccCCCCccHHH
Confidence            99999999998754    4566777787 99999999999999999999999754  58999999999988888899999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +||+++++++++++.+++++||+||+|+||+++|++.......++....+....|++|+++|+|+|++++||+++.
T Consensus       176 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~  251 (285)
T 2p91_A          176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDW  251 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCc
Confidence            9999999999999999999999999999999999986542211222223344578999999999999999999863

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=4.6e-42  Score=279.05  Aligned_cols=221  Identities=24%  Similarity=0.333  Sum_probs=189.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+.++++++.++    ..++.++++|++|++++++++++    +|+
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            3457899999999999999999999999999999998876655433    34688899999999998887764    489


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHH--HHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT--MIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      +|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.  |.+++ .|+||++||..+..+.++...|+++|
T Consensus       100 iD~lv~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  177 (277)
T 2rhc_B          100 VDVLVNNAGRPGGGATAELADEL-WLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVHAAPYSASK  177 (277)
T ss_dssp             CSEEEECCCCCCCSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccCCCCCccHHHHH
Confidence            99999999988767777788887 9999999999999999999998  87765 68999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC---C------CCccCCcccCCCCCCcCCCCCcccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS---D------PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~---~------~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s  230 (238)
                      +++++++++++.|++++||++|+|+||+++|++......   .      ++....+....|++|+++|+|+|++++||++
T Consensus       178 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s  257 (277)
T 2rhc_B          178 HGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIG  257 (277)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999998543110   0      1112223445789999999999999999998


Q ss_pred             cc
Q psy14567        231 SV  232 (238)
Q Consensus       231 ~~  232 (238)
                      +.
T Consensus       258 ~~  259 (277)
T 2rhc_B          258 PG  259 (277)
T ss_dssp             GG
T ss_pred             ch
Confidence            74

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=7.9e-41  Score=270.29  Aligned_cols=218  Identities=18%  Similarity=0.231  Sum_probs=189.0

Q ss_pred             CCcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCChHh-----HHHHHhh-CCCceEEEeecCCHHHHHHHHHhc--
Q psy14567         10 DRTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKTQAN-----LDSLKQA-FPNVQTVQVDLQDWARTRAAVSKV--   79 (238)
Q Consensus        10 ~~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~--   79 (238)
                      .+.++++||||+  +|||+++|++|+++|++|++++|+.+.     .+++.+. ..++.++++|++|+++++++++++  
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            456789999999  999999999999999999999887533     3344433 346888999999999998887654  


Q ss_pred             --CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC--CCCchh
Q psy14567         80 --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL--EGHTIY  155 (238)
Q Consensus        80 --g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~~y  155 (238)
                        +++|++|||||+....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.  ++...|
T Consensus        98 ~~g~id~li~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~Y  175 (267)
T 3gdg_A           98 DFGQIDAFIANAGATADSGILDGSVEA-WNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANFPQEQTSY  175 (267)
T ss_dssp             HTSCCSEEEECCCCCCCSCTTTSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCSSSCCHHH
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHH-HHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCCCCCCCcc
Confidence              8999999999998877888888888 999999999999999999999998877 7899999999987765  578899


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++||+++++|+++++.|++++ |+||+|+||+++|++.+..  .++....+....|++|+++|+|+|++++||+|+.
T Consensus       176 ~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~  249 (267)
T 3gdg_A          176 NVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFV--PKETQQLWHSMIPMGRDGLAKELKGAYVYFASDA  249 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGS--CHHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTT
T ss_pred             hHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhC--CHHHHHHHHhcCCCCCCcCHHHHHhHhheeecCc
Confidence            999999999999999999987 9999999999999997643  3344445567789999999999999999999874

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=1.1e-41  Score=271.26  Aligned_cols=213  Identities=23%  Similarity=0.273  Sum_probs=182.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHH----hcCCccEEEEc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS----KVGPVDVLINN   88 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~----~~g~id~li~~   88 (238)
                      ++++||||+||||++++++|+++|++|++++|+.++..+   +. .+..+++|+++ ++++++++    +++++|++|||
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~-~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~   77 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ---SL-GAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHA   77 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---HH-TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---hh-CcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEEC
Confidence            578999999999999999999999999999999876322   22 27789999999 77776664    45899999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC--CCCchhhHHHHHHHHHH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL--EGHTIYSASKAALDSIT  166 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~~y~~sK~al~~l~  166 (238)
                      ||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.  ++...|++||+++++++
T Consensus        78 Ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~  155 (239)
T 2ekp_A           78 AAVNVRKPALELSYEE-WRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLT  155 (239)
T ss_dssp             CCCCCCCCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCCCCCCccHHHHHHHHHHHH
Confidence            9988777778888888 999999999999999999999998876 6899999999988876  78899999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.|++++||++|+|+||+++|++.......++....+....|++|+.+|+|+|+++.||+++.
T Consensus       156 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~  221 (239)
T 2ekp_A          156 RALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDE  221 (239)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            999999999999999999999999986532112222233345678999999999999999999874

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=1.6e-41  Score=272.69  Aligned_cols=220  Identities=23%  Similarity=0.273  Sum_probs=185.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH--hHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA--NLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.+  ..+++.+...++.++++|++|++++++++++    +|++|+
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDI   82 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3467899999999999999999999999999999865  2233433344688899999999999888764    489999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|+++|+++++
T Consensus        83 lv~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  160 (255)
T 2q2v_A           83 LVNNAGIQHVAPVEQFPLES-WDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGSTGKAAYVAAKHGVVG  160 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCCCCchhHHHHHHHHHH
Confidence            99999988767777788887 999999999999999999999998876 6899999999998888889999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC-CCCc---c----CCc-ccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-DPAK---A----GPM-LAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-~~~~---~----~~~-~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++.|++++||++|+|+||+++|++...... .++.   .    ..+ ....|++|+++|+|+|++++||+++.
T Consensus       161 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~  237 (255)
T 2q2v_A          161 LTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEA  237 (255)
T ss_dssp             HHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCc
Confidence            9999999999999999999999999998643110 0111   0    122 45578999999999999999999874

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=2.9e-41  Score=272.93  Aligned_cols=218  Identities=22%  Similarity=0.301  Sum_probs=189.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEE-ecCChHhHHHH----HhhCCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIA-LSKTQANLDSL----KQAFPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      ..++++||||++|||+++|++|+++|++|++ ..|+.+..++.    .+..+++.++.+|++|++++++++++    +++
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA  104 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            3468899999999999999999999999866 55776655443    34456789999999999999887765    489


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||+....++.+.+.++ |+..+++|+.+++.+++.+++.+.++...++||++||..+..+.++...|++||+|
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  183 (267)
T 4iiu_A          105 WYGVVSNAGIARDAAFPALSNDD-WDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAG  183 (267)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             ccEEEECCCCCCCCccccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHHH
Confidence            99999999998877777888888 99999999999999999999988744447899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++++.+++++||++|+|+||+++|++....   ++.........|++|+++|+|+|+++.||+++.
T Consensus       184 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~  251 (267)
T 4iiu_A          184 IIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---ESALKEAMSMIPMKRMGQAEEVAGLASYLMSDI  251 (267)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCc
Confidence            99999999999999999999999999999997542   334445566789999999999999999999974

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=2.5e-41  Score=280.79  Aligned_cols=218  Identities=28%  Similarity=0.277  Sum_probs=185.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEec-CChHhHHHHHhh-----CCCceEEEeecCCHH-------------
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALS-KTQANLDSLKQA-----FPNVQTVQVDLQDWA-------------   70 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~~~-----~~~~~~~~~D~~~~~-------------   70 (238)
                      .+.++++||||++|||+++|++|+++|++|++++ |+.++++++.++     ..++.++++|++|++             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            3457899999999999999999999999999999 998877665543     236889999999998             


Q ss_pred             ----HHHHHHHh----cCCccEEEEccCCCCCCCCCCCC--------------hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14567         71 ----RTRAAVSK----VGPVDVLINNAAVARFDRFLDID--------------EENLIDSIFDVNIKAVINISQVVSKTM  128 (238)
Q Consensus        71 ----~v~~~~~~----~g~id~li~~ag~~~~~~~~~~~--------------~~~~~~~~~~~n~~~~~~~~~~~~~~~  128 (238)
                          ++++++++    +|++|+||||||+....++.+.+              .++ |+.++++|+.+++.++++++|.|
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m  202 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETA-TADLFGSNAIAPYFLIKAFAHRV  202 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHH-HHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence                88877754    48999999999988766777777              676 99999999999999999999999


Q ss_pred             HhccC-----CceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCcc
Q psy14567        129 IDHKI-----QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKA  203 (238)
Q Consensus       129 ~~~~~-----~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~  203 (238)
                      .+++.     .|+||++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++ .. .  ++..
T Consensus       203 ~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~-~--~~~~  278 (328)
T 2qhx_A          203 AGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DM-P--PAVW  278 (328)
T ss_dssp             HHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS-C--HHHH
T ss_pred             HhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cc-c--HHHH
Confidence            86541     48999999999999989999999999999999999999999999999999999999998 32 1  2223


Q ss_pred             CCcccCCCCC-CcCCCCCcccccccccccc
Q psy14567        204 GPMLAKTPLG-RFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       204 ~~~~~~~~~~-r~~~~~~ia~~~~~l~s~~  232 (238)
                      ..+....|++ |+++|+|+|++++||+++.
T Consensus       279 ~~~~~~~p~~~r~~~pedvA~~v~~l~s~~  308 (328)
T 2qhx_A          279 EGHRSKVPLYQRDSSAAEVSDVVIFLCSSK  308 (328)
T ss_dssp             HHHHTTCTTTTSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHhhCCCCCCCCCHHHHHHHHHHHhCcc
Confidence            3344567888 9999999999999999863

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=9.6e-41  Score=264.96  Aligned_cols=208  Identities=18%  Similarity=0.185  Sum_probs=180.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh-----CCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA-----FPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      +++++||||++|||+++|++|+++|++|++++|+.++++++.++     ..++.++++|++|++++++++++    +|++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            57889999999999999999999999999999999887765443     34688999999999999887754    4899


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.++  ++++|+++|..+..+.++...|+++|+++
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~  158 (235)
T 3l77_A           82 DVVVANAGLGYFKRLEELSEEE-FHEMIEVNLLGVWRTLKAFLDSLKRT--GGLALVTTSDVSARLIPYGGGYVSTKWAA  158 (235)
T ss_dssp             SEEEECCCCCCCCCTTTSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGSSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCccccccCcccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEEecchhcccCCCcchHHHHHHHH
Confidence            9999999998888888888888 99999999999999999999999544  58999999999988888999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGL  234 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~  234 (238)
                      ++++++++  +...||++|+|+||+++|+|.......          .+..|+.+|+|+|+++.||+++...
T Consensus       159 ~~~~~~l~--~~~~~i~v~~v~PG~v~T~~~~~~~~~----------~~~~~~~~p~dva~~v~~l~~~~~~  218 (235)
T 3l77_A          159 RALVRTFQ--IENPDVRFFELRPGAVDTYFGGSKPGK----------PKEKGYLKPDEIAEAVRCLLKLPKD  218 (235)
T ss_dssp             HHHHHHHH--HHCTTSEEEEEEECSBSSSTTTCCSCC----------CGGGTCBCHHHHHHHHHHHHTSCTT
T ss_pred             HHHHHHHh--hcCCCeEEEEEeCCccccccccccCCc----------ccccCCCCHHHHHHHHHHHHcCCCC
Confidence            99999994  446789999999999999997653221          1223788999999999999998654

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=5.3e-41  Score=270.44  Aligned_cols=220  Identities=22%  Similarity=0.199  Sum_probs=176.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh-----cCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK-----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~-----~g~   81 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++++++.++    ..++.++++|++|++++++++++     +|+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            457889999999999999999999999999999998877665443    34688899999999999888764     689


Q ss_pred             ccEEEEccC--CC-----CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCch
Q psy14567         82 VDVLINNAA--VA-----RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTI  154 (238)
Q Consensus        82 id~li~~ag--~~-----~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  154 (238)
                      +|++|||||  +.     ...++.+.+.++ |++++++|+.+++.+++++.|.|.+++ .|+||++||..+..+. +...
T Consensus        84 id~lvnnAg~g~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-~~~~  160 (260)
T 2qq5_A           84 LDVLVNNAYAGVQTILNTRNKAFWETPASM-WDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQYM-FNVP  160 (260)
T ss_dssp             CCEEEECCCTTHHHHHHTTTCCTTTSCTTH-HHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSCC-SSHH
T ss_pred             ceEEEECCccccccccccCCCccccCCHHH-HHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCCC-CCCc
Confidence            999999995  32     235667777777 999999999999999999999998776 6899999999886643 4689


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCcc-CCcc--cCCCCCCcCCCCCccccccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKA-GPML--AKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~-~~~~--~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      |++||+++++|+++++.|++++||+||+|+||+++|+|........+.. ....  ...|++|..+|+|+|++++||+|+
T Consensus       161 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~  240 (260)
T 2qq5_A          161 YGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATD  240 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999975432211111 1111  134678889999999999999998


Q ss_pred             cc
Q psy14567        232 VG  233 (238)
Q Consensus       232 ~~  233 (238)
                      ..
T Consensus       241 ~~  242 (260)
T 2qq5_A          241 PN  242 (260)
T ss_dssp             TT
T ss_pred             cc
Confidence            64

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=2e-41  Score=273.70  Aligned_cols=219  Identities=16%  Similarity=0.188  Sum_probs=189.5

Q ss_pred             CCcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCChHhH---HHHHhhCC--CceEEEeecCCHHHHHHHHHhc---
Q psy14567         10 DRTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKTQANL---DSLKQAFP--NVQTVQVDLQDWARTRAAVSKV---   79 (238)
Q Consensus        10 ~~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~---   79 (238)
                      .+.++++||||+  +|||+++|++|+++|++|++++|+.+..   +++.++.+  ++.++++|++|+++++++++++   
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            355788999999  6799999999999999999999987543   34444433  5889999999999998888654   


Q ss_pred             -CCccEEEEccCCCC----CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCch
Q psy14567         80 -GPVDVLINNAAVAR----FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTI  154 (238)
Q Consensus        80 -g~id~li~~ag~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  154 (238)
                       |++|++|||||+..    ..++.+.+.++ |+..+++|+.+++.++++++|.|++   +|+||++||..+..+.++...
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~  160 (266)
T 3oig_A           85 VGVIHGIAHCIAFANKEELVGEYLNTNRDG-FLLAHNISSYSLTAVVKAARPMMTE---GGSIVTLTYLGGELVMPNYNV  160 (266)
T ss_dssp             HSCCCEEEECCCCCCGGGGSSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTSCCTTTHH
T ss_pred             hCCeeEEEEccccccccccccchhhccHHH-HHHHHHHhHHHHHHHHHHHHhhcCC---CceEEEEecccccccCCCcch
Confidence             89999999999875    35667778887 9999999999999999999999864   589999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |++||+|+++|+++++.|++++||+||+|+||+++|++.......++....+....|++|+.+|+|+|++++||+++.
T Consensus       161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~  238 (266)
T 3oig_A          161 MGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDM  238 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCc
Confidence            999999999999999999999999999999999999998764433344555667789999999999999999999974

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=9.6e-42  Score=273.66  Aligned_cols=212  Identities=26%  Similarity=0.388  Sum_probs=177.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      ...++++||||+||||++++++|+++|++|++++|+.+.++       .+.++++|++|++++++++++    +|++|++
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l   91 (253)
T 2nm0_A           19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-------GFLAVKCDITDTEQVEQAYKEIEETHGPVEVL   91 (253)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-------cceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            34578999999999999999999999999999999875532       377899999999999887755    4899999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|+++|++++++
T Consensus        92 v~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~  169 (253)
T 2nm0_A           92 IANAGVTKDQLLMRMSEED-FTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGSAGQANYAASKAGLVGF  169 (253)
T ss_dssp             EEECSCCTTTC---CCTTT-THHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCCCcHHHHHHHHHHHHH
Confidence            9999988777777778887 999999999999999999999998776 68999999999888777788999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++.|++++||++|+|+||+++|++....  .++....+....|++|+.+|+|+|+.++||+++.
T Consensus       170 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~  234 (253)
T 2nm0_A          170 ARSLARELGSRNITFNVVAPGFVDTDMTKVL--TDEQRANIVSQVPLGRYARPEEIAATVRFLASDD  234 (253)
T ss_dssp             HHHHHHHHCSSSEEEEEEEECSBCC-----------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHhhhcCeEEEEEEeCcCcCcchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999986542  1222222344578999999999999999999874

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=4.1e-41  Score=273.26  Aligned_cols=216  Identities=22%  Similarity=0.247  Sum_probs=180.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHHhh-----CCCceEEEeecCCH----HHHHHHHHh-
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLKQA-----FPNVQTVQVDLQDW----ARTRAAVSK-   78 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~-----~~~~~~~~~D~~~~----~~v~~~~~~-   78 (238)
                      .+.++++||||++|||++++++|+++|++|++++| +.+.++++.++     ..++.++++|++|+    +++++++++ 
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            34578999999999999999999999999999999 88776665443     34688899999999    888887754 


Q ss_pred             ---cCCccEEEEccCCCCCCCCCCCCh-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC------ceEE
Q psy14567         79 ---VGPVDVLINNAAVARFDRFLDIDE-----------ENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ------GSIV  138 (238)
Q Consensus        79 ---~g~id~li~~ag~~~~~~~~~~~~-----------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~------g~iv  138 (238)
                         +|++|++|||||+....++.+.+.           ++ |++++++|+.+++.++++++|.|. ++ .      ++||
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~-~~-~~~~~~~g~iv  165 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQ-VAELFGSNAVAPLFLIRAFARRQG-EG-GAWRSRNLSVV  165 (276)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHH-HHHHHHHHTHHHHHHHHHHHHTC---------CCCEEEE
T ss_pred             HHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHH-HHHHHHhccHHHHHHHHHHHHHHh-cC-CCCCCCCcEEE
Confidence               489999999999887667777776           76 999999999999999999999987 43 4      8999


Q ss_pred             EEccccccccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCC-cCC
Q psy14567        139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGR-FAG  217 (238)
Q Consensus       139 ~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r-~~~  217 (238)
                      ++||..+..+.++...|++||+++++|+++++.+++++||+||+|+||+++|+ . . . .++....+....|++| +.+
T Consensus       166 ~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~-~-~~~~~~~~~~~~p~~r~~~~  241 (276)
T 1mxh_A          166 NLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-A-M-PQETQEEYRRKVPLGQSEAS  241 (276)
T ss_dssp             EECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-S-S-CHHHHHHHHTTCTTTSCCBC
T ss_pred             EECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-c-C-CHHHHHHHHhcCCCCCCCCC
Confidence            99999999998999999999999999999999999999999999999999999 2 1 1 2222223344578899 999


Q ss_pred             CCCcccccccccccc
Q psy14567        218 KLKPKPWNRWLLPSV  232 (238)
Q Consensus       218 ~~~ia~~~~~l~s~~  232 (238)
                      |+|+|++++||+++.
T Consensus       242 ~~dva~~v~~l~s~~  256 (276)
T 1mxh_A          242 AAQIADAIAFLVSKD  256 (276)
T ss_dssp             HHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhCcc
Confidence            999999999999873

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=8.7e-41  Score=270.86  Aligned_cols=220  Identities=26%  Similarity=0.291  Sum_probs=178.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEe-cCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIAL-SKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      +.++++||||++|||+++|++|+++|++|+++ .|+.+..+++.+.    ..++.++.+|++|+++++++++++    ++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            35689999999999999999999999999776 7887776655433    356889999999999998887654    89


Q ss_pred             ccEEEEccCCCCC-CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEEccccccccCC-CCchhhH
Q psy14567         82 VDVLINNAAVARF-DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH--KIQGSIVNVSSIAGKTALE-GHTIYSA  157 (238)
Q Consensus        82 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~-~~~~y~~  157 (238)
                      +|++|||||+... .++.+.+.++ |++.+++|+.+++.++++++|.|.+.  +..|+||++||..+..+.+ +...|++
T Consensus       105 id~li~nAg~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  183 (272)
T 4e3z_A          105 LDGLVNNAGIVDYPQRVDEMSVER-IERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAA  183 (272)
T ss_dssp             CCEEEECCCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHH
T ss_pred             CCEEEECCCCCCCCCChhhCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHH
Confidence            9999999998764 6677778888 99999999999999999999999773  2268999999999877665 6678999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ||+++++|+++++.+++++||++|+|+||+++|++.... ..++....+....|++|+++|+|+|++++||+++.
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~  257 (272)
T 4e3z_A          184 SKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG-GLPDRAREMAPSVPMQRAGMPEEVADAILYLLSPS  257 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc-CChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCc
Confidence            999999999999999999999999999999999987652 23344555667789999999999999999999874

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=2e-41  Score=273.64  Aligned_cols=218  Identities=13%  Similarity=0.144  Sum_probs=184.5

Q ss_pred             CcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCCh---HhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKTQ---ANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||+  +|||++++++|+++|++|++++|+.   +.++++.+..+...++++|++|++++++++++    +|+
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45678999999  9999999999999999999999987   45556655555567899999999999888765    478


Q ss_pred             ccEEEEccCCCCC----CCCCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         82 VDVLINNAAVARF----DRFLD-IDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        82 id~li~~ag~~~~----~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                      +|++|||||+...    .++.+ .+.++ |++.+++|+.+++.++++++|.|.+   +|+||++||..+..+.++...|+
T Consensus        88 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~  163 (265)
T 1qsg_A           88 FDGFVHSIGFAPGDQLDGDYVNAVTREG-FKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERAIPNYNVMG  163 (265)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHH-HHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTTTHHH
T ss_pred             CCEEEECCCCCCccccCCCccccCCHHH-HHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEcchhhccCCCCchHHH
Confidence            9999999998753    44555 67777 9999999999999999999999863   47999999999988888899999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +||+++++++++++.+++++||+||+|+||+++|++.......++....+....|++|+.+|+|+|++++||+++.
T Consensus       164 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~  239 (265)
T 1qsg_A          164 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDL  239 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999987542211222223344578999999999999999999874

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=1.2e-41  Score=274.39  Aligned_cols=218  Identities=19%  Similarity=0.231  Sum_probs=186.0

Q ss_pred             CcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCChH---hHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKTQA---NLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||+  ||||++++++|+++|++|++++|+.+   .++++.+..+.+.++++|++|++++++++++    +|+
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            34678999999  99999999999999999999999875   4556655555678899999999999887765    489


Q ss_pred             ccEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhH
Q psy14567         82 VDVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSA  157 (238)
Q Consensus        82 id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~  157 (238)
                      +|++|||||+...    .++.+.+.++ |++.+++|+.+++.++++++|.|.+   +|+||++||..+..+.++...|++
T Consensus        87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~a  162 (261)
T 2wyu_A           87 LDYLVHAIAFAPREAMEGRYIDTRRQD-WLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEKVVPKYNVMAI  162 (261)
T ss_dssp             EEEEEECCCCCCHHHHSSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTSBCTTCHHHHH
T ss_pred             CCEEEECCCCCCcccCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHhcc---CCEEEEEecccccCCCCCchHHHH
Confidence            9999999998753    5666777887 9999999999999999999999863   479999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ||+++++++++++.+++++||++|+|+||+++|++.......++....+....|++|+++|+|+|++++||+++.
T Consensus       163 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~  237 (261)
T 2wyu_A          163 AKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPL  237 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChh
Confidence            999999999999999999999999999999999986543211222233445679999999999999999999864

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=4.8e-40  Score=265.50  Aligned_cols=219  Identities=26%  Similarity=0.345  Sum_probs=162.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc-----CC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV-----GP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~-----g~   81 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++++++.++    ..++.++.+|++++++++++++++     ++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            457889999999999999999999999999999998876655433    346888999999999998888654     78


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||.....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|+++|++
T Consensus        93 id~li~~Ag~~~~~~~~~~~~~~-~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a  170 (266)
T 1xq1_A           93 LDILINNLGAIRSKPTLDYTAED-FSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSASVGSIYSATKGA  170 (266)
T ss_dssp             CSEEEEECCC------CCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------CCHHHHHHHH
T ss_pred             CcEEEECCCCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCCCCCchHHHHHHH
Confidence            99999999988767777788887 999999999999999999999998776 6899999999998888888999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++.++++++.+++++||++|.|+||++.|++..... .++.........|++|+++|+|+|+++.||+++.
T Consensus       171 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  240 (266)
T 1xq1_A          171 LNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPA  240 (266)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999876533 2233344455678899999999999999999863

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=3.3e-41  Score=270.63  Aligned_cols=218  Identities=24%  Similarity=0.279  Sum_probs=188.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEe-cCChHhHHHHH----hhCCCceEEEeecCCHHHHHHHHHhc------
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIAL-SKTQANLDSLK----QAFPNVQTVQVDLQDWARTRAAVSKV------   79 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~----~~~~~~~~~~~D~~~~~~v~~~~~~~------   79 (238)
                      +.++++||||++|||++++++|+++|++|+++ .|+.+..++..    +....+.++.+|+++.++++++++++      
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            45789999999999999999999999999885 67766655443    33456888999999999998887654      


Q ss_pred             ----CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchh
Q psy14567         80 ----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIY  155 (238)
Q Consensus        80 ----g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y  155 (238)
                          +++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+   .++||++||..+..+.++...|
T Consensus        86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~Y  161 (255)
T 3icc_A           86 RTGSTKFDILINNAGIGPGAFIEETTEQF-FDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRISLPDFIAY  161 (255)
T ss_dssp             HHSSSCEEEEEECCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGTSCCTTBHHH
T ss_pred             cccCCcccEEEECCCCCCCCChhhCCHHH-HHHHHhhhchHHHHHHHHHHHhhCC---CCEEEEeCChhhccCCCCcchh
Confidence                3599999999998777777788887 9999999999999999999999843   4799999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++||+++++++++++.|++++||+||+|+||+++|+|.......+..........|++|+++|+|+|+++.||+|+.
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  238 (255)
T 3icc_A          162 SMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPD  238 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999999998775544444445556789999999999999999999874

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=4e-41  Score=275.00  Aligned_cols=217  Identities=24%  Similarity=0.256  Sum_probs=181.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh-HhHHHHHhh-----CCCceEEEeecCC----HHHHHHHHHh--
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ-ANLDSLKQA-----FPNVQTVQVDLQD----WARTRAAVSK--   78 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~-----~~~~~~~~~D~~~----~~~v~~~~~~--   78 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+. +.++++.++     ..++.++++|++|    ++++++++++  
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999998 666555432     3468889999999    9998887764  


Q ss_pred             --cCCccEEEEccCCCCCCCC-----CC-----CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-----CceEEEEc
Q psy14567         79 --VGPVDVLINNAAVARFDRF-----LD-----IDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI-----QGSIVNVS  141 (238)
Q Consensus        79 --~g~id~li~~ag~~~~~~~-----~~-----~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~g~iv~is  141 (238)
                        +|++|+||||||+....++     .+     .+.++ |++.+++|+.+++.+++.++|.|.+++.     .|+||++|
T Consensus       102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~is  180 (288)
T 2x9g_A          102 RAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ-VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC  180 (288)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSCCC--------CCHHHH-HHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEEC
T ss_pred             HhcCCCCEEEECCCCCCCCccccccchhcccccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEe
Confidence              4899999999998766555     45     56666 9999999999999999999999976541     47999999


Q ss_pred             cccccccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCc-CCCCC
Q psy14567        142 SIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRF-AGKLK  220 (238)
Q Consensus       142 S~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~-~~~~~  220 (238)
                      |..+..+.++...|++||+++++|+++++.+++++||+||+|+||+++|++ . . . ++....+....|++|+ .+|+|
T Consensus       181 S~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~-~-~~~~~~~~~~~p~~r~~~~ped  256 (288)
T 2x9g_A          181 DAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M-G-EEEKDKWRRKVPLGRREASAEQ  256 (288)
T ss_dssp             CTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S-C-HHHHHHHHHTCTTTSSCCCHHH
T ss_pred             cccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c-C-hHHHHHHHhhCCCCCCCCCHHH
Confidence            999988889999999999999999999999999999999999999999998 3 1 1 2222233455789999 99999


Q ss_pred             cccccccccccc
Q psy14567        221 PKPWNRWLLPSV  232 (238)
Q Consensus       221 ia~~~~~l~s~~  232 (238)
                      +|++++||+++.
T Consensus       257 vA~~v~~l~s~~  268 (288)
T 2x9g_A          257 IADAVIFLVSGS  268 (288)
T ss_dssp             HHHHHHHHHSGG
T ss_pred             HHHHHHHHhCcc
Confidence            999999999874

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.5e-41  Score=271.76  Aligned_cols=211  Identities=23%  Similarity=0.309  Sum_probs=175.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~li   86 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++.++       ...+++|++|++++++++++    +|++|++|
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-------LFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------SEEEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-------hcCeeccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45789999999999999999999999999999998765432       22488999999999888765    48999999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||+....++.+.+.++ |++++++|+.+++.++++++|.|++++ .|+||++||..+..+.++...|++||+++++++
T Consensus        87 ~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  164 (247)
T 1uzm_A           87 SNAGLSADAFLMRMTEEK-FEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAASKAGVIGMA  164 (247)
T ss_dssp             EECSCCC-----CCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----CCHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCCCCChhHHHHHHHHHHHH
Confidence            999988777777888888 999999999999999999999998776 689999999999888888999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.|++++||++|+|+||+++|++....  .++.........|++|+.+|+|+|+.++||+++.
T Consensus       165 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~  228 (247)
T 1uzm_A          165 RSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASED  228 (247)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHhhhcCcEEEEEEeCCCcccchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999986542  1222223344578899999999999999999863

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.5e-40  Score=277.53  Aligned_cols=209  Identities=21%  Similarity=0.185  Sum_probs=183.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-----------HHHHHhhCCCceEEEeecCCHHHHHHHHHh
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-----------LDSLKQAFPNVQTVQVDLQDWARTRAAVSK   78 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   78 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+.           .+++.+....+.++++|++|++++++++++
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            356789999999999999999999999999999998753           334444455788999999999999888765


Q ss_pred             c----CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc--CCCC
Q psy14567         79 V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA--LEGH  152 (238)
Q Consensus        79 ~----g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~  152 (238)
                      +    |++|+||||||+....++.+.+.++ |++++++|+.+++.++++++|+|++++ .|+||++||..+..+  .++.
T Consensus       123 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~~~~~~  200 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISLTNTLDTPTKR-LDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPVWFKQH  200 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHH-HHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGGGTSSS
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCCCCCCc
Confidence            4    8999999999998888888888888 999999999999999999999998876 789999999998776  6788


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCc-eecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTV-VMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ..|++||+++++++++++.|++ +||+||+|+||+ ++|++.+...          ...|++|+.+|+|+|++++||+++
T Consensus       201 ~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~----------~~~~~~r~~~pedvA~~v~~L~s~  269 (346)
T 3kvo_A          201 CAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLG----------GPGIESQCRKVDIIADAAYSIFQK  269 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHC----------C--CGGGCBCTHHHHHHHHHHHTS
T ss_pred             hHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhc----------cccccccCCCHHHHHHHHHHHHhc
Confidence            9999999999999999999999 899999999995 9998764321          223678999999999999999998

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=4.4e-41  Score=274.09  Aligned_cols=218  Identities=20%  Similarity=0.293  Sum_probs=182.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-HHH----HHhhCCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-LDS----LKQAFPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~----~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.+. .++    +.+...++.++++|++|++++++++++    +|+
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999999998653 333    333345688899999999999887754    489


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCC-CchhhHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEG-HTIYSASKA  160 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~y~~sK~  160 (238)
                      +|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.  + .|+||++||..+..+.++ ...|++||+
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~--~-~g~iv~isS~~~~~~~~~~~~~Y~asK~  183 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEE-FDRVFTINTRGQFFVAREAYKHLE--I-GGRLILMGSITGQAKAVPKHAVYSGSKG  183 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHSC--T-TCEEEEECCGGGTCSSCSSCHHHHHHHH
T ss_pred             CCEEEECCCcCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHh--c-CCeEEEEechhhccCCCCCCcchHHHHH
Confidence            99999999988777777888888 999999999999999999999983  3 589999999998877654 889999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC----C-----CCCccCCccc--CCCCCCcCCCCCccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW----S-----DPAKAGPMLA--KTPLGRFAGKLKPKPWNRWLL  229 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~----~-----~~~~~~~~~~--~~~~~r~~~~~~ia~~~~~l~  229 (238)
                      ++++|+++++.|++++||+||+|+||+++|++.....    .     .++....+..  ..|++|+++|+|+|++++||+
T Consensus       184 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~  263 (283)
T 1g0o_A          184 AIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLA  263 (283)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999854311    0     1111122333  679999999999999999999


Q ss_pred             ccc
Q psy14567        230 PSV  232 (238)
Q Consensus       230 s~~  232 (238)
                      |+.
T Consensus       264 s~~  266 (283)
T 1g0o_A          264 SND  266 (283)
T ss_dssp             SGG
T ss_pred             Ccc
Confidence            974

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=3.4e-40  Score=273.48  Aligned_cols=217  Identities=23%  Similarity=0.281  Sum_probs=181.2

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC----------hHhHHH----HHhhCCCceEEEeecCCHHHHHH
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT----------QANLDS----LKQAFPNVQTVQVDLQDWARTRA   74 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~----------~~~~~~----~~~~~~~~~~~~~D~~~~~~v~~   74 (238)
                      ..+.++++||||++|||+++|++|+++|++|++++|+          .+.+++    +.+....+.++++|++|++++++
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            3456789999999999999999999999999999987          444443    33344568889999999999888


Q ss_pred             HHHh----cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-----CceEEEEccccc
Q psy14567         75 AVSK----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI-----QGSIVNVSSIAG  145 (238)
Q Consensus        75 ~~~~----~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----~g~iv~isS~~~  145 (238)
                      ++++    +|++|+||||||+....++.+.+.++ |++.+++|+.+++.+++++.|+|.+.+.     .|+||++||..+
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  182 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEE-FDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG  182 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence            7765    48999999999998877888888888 9999999999999999999999976431     379999999999


Q ss_pred             cccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccc
Q psy14567        146 KTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWN  225 (238)
Q Consensus       146 ~~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~  225 (238)
                      ..+.++...|++||+|+++|+++++.|++++||+||+|+|| ++|+|........     .....+..+..+|+|+|+++
T Consensus       183 ~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~-----~~~~~~~~~~~~pedva~~v  256 (322)
T 3qlj_A          183 LQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEM-----MATQDQDFDAMAPENVSPLV  256 (322)
T ss_dssp             HHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------------CCTTCGGGTHHHH
T ss_pred             ccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhh-----hhccccccCCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999 9999876533211     11112233567999999999


Q ss_pred             ccccccc
Q psy14567        226 RWLLPSV  232 (238)
Q Consensus       226 ~~l~s~~  232 (238)
                      +||+|+.
T Consensus       257 ~~L~s~~  263 (322)
T 3qlj_A          257 VWLGSAE  263 (322)
T ss_dssp             HHHTSGG
T ss_pred             HHHhCcc
Confidence            9999874

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=9.6e-41  Score=271.78  Aligned_cols=222  Identities=18%  Similarity=0.220  Sum_probs=190.1

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhc---CCcc
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKV---GPVD   83 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~---g~id   83 (238)
                      ...+.++++||||++|||+++|++|+++|++|++++|+.++++++.++. .++.++++|++|+++++++++++   +++|
T Consensus        26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id  105 (281)
T 3ppi_A           26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLR  105 (281)
T ss_dssp             GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEE
T ss_pred             hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            3445678999999999999999999999999999999999988877665 45889999999999998888654   7899


Q ss_pred             EEEEc-cCCCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCceEEEEccccccccCCCC
Q psy14567         84 VLINN-AAVARFDRF-----LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH-----KIQGSIVNVSSIAGKTALEGH  152 (238)
Q Consensus        84 ~li~~-ag~~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~~~  152 (238)
                      ++||| +|+.....+     .+.+.++ |++.+++|+.+++.+++.++|.+.+.     +..|+||++||..+..+.++.
T Consensus       106 ~lv~~aag~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  184 (281)
T 3ppi_A          106 YAVVAHGGFGVAQRIVQRDGSPADMGG-FTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQ  184 (281)
T ss_dssp             EEEECCCCCCCCCCSBCTTSCBCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTC
T ss_pred             eEEEccCcccccccccccccccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCC
Confidence            99999 555444333     2456676 99999999999999999999999861     226899999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCC-CCcCCCCCccccccccccc
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPL-GRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~ia~~~~~l~s~  231 (238)
                      ..|++||+|+++++++++.|++++||+||+|+||+++|++....  .++....+....|+ +|+.+|+|+|++++||+++
T Consensus       185 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l~s~  262 (281)
T 3ppi_A          185 TAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPFPKRLGTPDEFADAAAFLLTN  262 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT--CHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHC
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc--cHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999987653  23334445566777 9999999999999999987


Q ss_pred             c
Q psy14567        232 V  232 (238)
Q Consensus       232 ~  232 (238)
                      .
T Consensus       263 ~  263 (281)
T 3ppi_A          263 G  263 (281)
T ss_dssp             S
T ss_pred             C
Confidence            3

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=1.8e-41  Score=273.01  Aligned_cols=217  Identities=22%  Similarity=0.259  Sum_probs=182.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhh---CCCEEEEecCChHhHHHHHhh------CCCceEEEeecCCHHHHHHHHHhc--
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQ---HEAIIIALSKTQANLDSLKQA------FPNVQTVQVDLQDWARTRAAVSKV--   79 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~---~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~~--   79 (238)
                      +.++++||||++|||++++++|++   +|++|++++|+.++++++.++      ..++.++++|++|+++++++++++  
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            456889999999999999999999   899999999999877665543      235788999999999998887644  


Q ss_pred             ----CCcc--EEEEccCCCCC--CCCCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCceEEEEcccccccc
Q psy14567         80 ----GPVD--VLINNAAVARF--DRFLD-IDEENLIDSIFDVNIKAVINISQVVSKTMIDH--KIQGSIVNVSSIAGKTA  148 (238)
Q Consensus        80 ----g~id--~li~~ag~~~~--~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~  148 (238)
                          |++|  ++|||||+...  .++.+ .+.++ |++++++|+.+++.++++++|.|.++  + .|+||++||..+..+
T Consensus        85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~g~iv~isS~~~~~~  162 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAE-VNNYWALNLTSMLCLTSGTLNAFQDSPGL-SKTVVNISSLCALQP  162 (259)
T ss_dssp             SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHH-HHHHHHHHTHHHHHHHHHHHHTSCCCTTC-EEEEEEECCGGGTSC
T ss_pred             ccccccCCccEEEECCcccCCCCcchhccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHhhccCC-CceEEEEcCchhcCC
Confidence                5788  99999998643  35666 56777 99999999999999999999999775  3 589999999999999


Q ss_pred             CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC---CCCCccCCcccCCCCCCcCCCCCccccc
Q psy14567        149 LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW---SDPAKAGPMLAKTPLGRFAGKLKPKPWN  225 (238)
Q Consensus       149 ~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~r~~~~~~ia~~~  225 (238)
                      .++...|++||+++++|+++++.|+++  |+||+|+||+++|+|.....   ..++....+....|++|+.+|+|+|+.+
T Consensus       163 ~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v  240 (259)
T 1oaa_A          163 YKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL  240 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHH
Confidence            899999999999999999999999974  99999999999999864321   1122222334456889999999999999


Q ss_pred             cccccc
Q psy14567        226 RWLLPS  231 (238)
Q Consensus       226 ~~l~s~  231 (238)
                      +||+++
T Consensus       241 ~~l~~~  246 (259)
T 1oaa_A          241 LGLLQK  246 (259)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            999985

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-40  Score=265.52  Aligned_cols=221  Identities=38%  Similarity=0.582  Sum_probs=193.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++.+++.++.++..++.+|++|++++++++++++++|++|||||
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            45678999999999999999999999999999999998888877766788889999999999999998889999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHH
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMA  170 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~  170 (238)
                      .....++.+.+.++ |++.+++|+.+++.+++++.|.+.+++..++||++||..+..+.++...|+++|++++.+++.++
T Consensus        86 ~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a  164 (244)
T 1cyd_A           86 LVIMQPFLEVTKEA-FDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMA  164 (244)
T ss_dssp             CCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCcccCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHH
Confidence            88766777778887 99999999999999999999999876435899999999998888888999999999999999999


Q ss_pred             HHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        171 LELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       171 ~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+++++||+++.|+||++.|++.......+.+...+....|++++.+++|+|+++++++++.
T Consensus       165 ~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  226 (244)
T 1cyd_A          165 MELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDR  226 (244)
T ss_dssp             HHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCch
Confidence            99999999999999999999986532222223233445568899999999999999999874

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=6.5e-42  Score=273.28  Aligned_cols=212  Identities=25%  Similarity=0.256  Sum_probs=184.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhh-CCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQ-HEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      ++++++||||++|||+++|++|++ .|++|++.+|+++.      ....+.++++|++|+++++++++.+  +++|++||
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~   76 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF------SAENLKFIKADLTKQQDITNVLDIIKNVSFDGIFL   76 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC------CCTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc------ccccceEEecCcCCHHHHHHHHHHHHhCCCCEEEE
Confidence            457899999999999999999999 78899999988752      1235688999999999999988655  68999999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHH
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITR  167 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~  167 (238)
                      |||+....++.+.+.++ |++++++|+.+++.++++++|.|.+   .|+||++||..+..+.++...|++||+++++|++
T Consensus        77 nAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~  152 (244)
T 4e4y_A           77 NAGILIKGSIFDIDIES-IKKVLDLNVWSSIYFIKGLENNLKV---GASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTK  152 (244)
T ss_dssp             CCCCCCCBCTTTSCHHH-HHHHHHHHTHHHHHHHHHTGGGEEE---EEEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCcccCCHHH-HHHHHHHccHHHHHHHHHHHHHhcc---CcEEEEECCHHHccCCCCCchhHHHHHHHHHHHH
Confidence            99998878888888888 9999999999999999999999865   3799999999999999999999999999999999


Q ss_pred             HHHHHhCCCCeEEEEEeCCceecCcccCCCC---------CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        168 TMALELGPYNIRVNSVQPTVVMTQMGRTGWS---------DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       168 ~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++.|++++||+||+|+||+++|++......         .++.........|++|+++|+|+|++++||+|+.
T Consensus       153 ~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~  226 (244)
T 4e4y_A          153 SLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDK  226 (244)
T ss_dssp             HHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCc
Confidence            9999999999999999999999998653211         1113334556789999999999999999999874

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.3e-41  Score=275.20  Aligned_cols=219  Identities=25%  Similarity=0.313  Sum_probs=178.7

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC------------hHhHHHH----HhhCCCceEEEeecCCHH
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT------------QANLDSL----KQAFPNVQTVQVDLQDWA   70 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~------------~~~~~~~----~~~~~~~~~~~~D~~~~~   70 (238)
                      +...+.++++||||++|||+++|++|+++|++|++++|+            .+.+++.    .....++.++++|++|++
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   84 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRA   84 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHH
Confidence            334566789999999999999999999999999999987            5444443    333456889999999999


Q ss_pred             HHHHHHHh----cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc
Q psy14567         71 RTRAAVSK----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK  146 (238)
Q Consensus        71 ~v~~~~~~----~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  146 (238)
                      ++++++++    +|++|++|||||+....  .+.+.++ |++.+++|+.+++.++++++|+|.+   .|+||++||..+.
T Consensus        85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~  158 (287)
T 3pxx_A           85 AVSRELANAVAEFGKLDVVVANAGICPLG--AHLPVQA-FADAFDVDFVGVINTVHAALPYLTS---GASIITTGSVAGL  158 (287)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCC--TTCCTHH-HHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCHHHH
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCcCccc--CcCCHHH-HHHHhhhhhhhhHHHHHHHHHHhhc---CcEEEEeccchhc
Confidence            99887765    48999999999987654  3366777 9999999999999999999999832   5899999999886


Q ss_pred             ccC-----------CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCC------C---CCCCc----
Q psy14567        147 TAL-----------EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG------W---SDPAK----  202 (238)
Q Consensus       147 ~~~-----------~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~------~---~~~~~----  202 (238)
                      .+.           ++...|++||+++++|+++++.+++++||+||+|+||+++|+|....      .   ..+..    
T Consensus       159 ~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T 3pxx_A          159 IAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADAL  238 (287)
T ss_dssp             HHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHH
T ss_pred             ccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHH
Confidence            654           55678999999999999999999999999999999999999997531      0   01110    


Q ss_pred             -cCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        203 -AGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       203 -~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                       ........| +|+++|+|+|++++||+|+.
T Consensus       239 ~~~~~~~~~~-~~~~~p~dva~~v~fL~s~~  268 (287)
T 3pxx_A          239 LAFPAMQAMP-TPYVEASDISNAVCFLASDE  268 (287)
T ss_dssp             HHGGGGCSSS-CSCBCHHHHHHHHHHHHSGG
T ss_pred             hhhhhhcccC-CCCCCHHHHHhhHheecchh
Confidence             001334456 89999999999999999974

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=4.7e-41  Score=271.33  Aligned_cols=212  Identities=25%  Similarity=0.355  Sum_probs=183.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~li   86 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.+.       ..++.++++|++|++++++++++    +|++|++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv   79 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLV   79 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45678999999999999999999999999999998755       34688899999999999887765    48999999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+++++++
T Consensus        80 ~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  157 (264)
T 2dtx_A           80 NNAGIESYGKIESMSMGE-WRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASIITKNASAYVTSKHAVIGLT  157 (264)
T ss_dssp             ECCCCCCCBCTTTSCHHH-HHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred             ECCCCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhccCCCCchhHHHHHHHHHHHH
Confidence            999988777788888888 999999999999999999999998766 689999999999888888999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCC-----CCC----CccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGW-----SDP----AKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~-----~~~----~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.+++++ |++|+|+||+++|++.....     ..+    +....+....|++|+++|+|+|++++||+++.
T Consensus       158 ~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~  231 (264)
T 2dtx_A          158 KSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASRE  231 (264)
T ss_dssp             HHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999998 99999999999999864321     011    11222334568899999999999999999874

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=2.1e-41  Score=270.38  Aligned_cols=212  Identities=15%  Similarity=0.147  Sum_probs=178.2

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEe-c--CChHhHHHHHhhCCCceEEEeecCCHHHHHH----HHHhcCCccEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIAL-S--KTQANLDSLKQAFPNVQTVQVDLQDWARTRA----AVSKVGPVDVL   85 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~----~~~~~g~id~l   85 (238)
                      ++++||||++|||++++++|+++|++|+++ +  |+.++++++.++...     +|+.|++++++    +.+++|++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~g~iD~l   76 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPG-----TIALAEQKPERLVDATLQHGEAIDTI   76 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTT-----EEECCCCCGGGHHHHHGGGSSCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCC-----CcccCHHHHHHHHHHHHHHcCCCCEE
Confidence            578999999999999999999999999999 6  999888887766522     23334444433    44556899999


Q ss_pred             EEccCCCCC---CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         86 INNAAVARF---DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        86 i~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |||||+...   .++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+++
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~  154 (244)
T 1zmo_A           77 VSNDYIPRPMNRLPLEGTSEAD-IRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPLAYNPLYGPARAAT  154 (244)
T ss_dssp             EECCCCCTTGGGCCSTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTCTTHHHHHHHH
T ss_pred             EECCCcCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCCCCchHHHHHHHHH
Confidence            999998876   7788888888 999999999999999999999998876 68999999999998889999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcc---cCCCCCCCccCCccc-CCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMG---RTGWSDPAKAGPMLA-KTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~---~~~~~~~~~~~~~~~-~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++|+++++.|++++||+||+|+||+++|+|.   .... .++....+.. ..|++|+.+|+|+|+++.||+++.
T Consensus       155 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~  227 (244)
T 1zmo_A          155 VALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWE-NNPELRERVDRDVPLGRLGRPDEMGALITFLASRR  227 (244)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHH-HCHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccccccc-chHHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999999986   3311 1111122233 578999999999999999999974

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.8e-40  Score=267.19  Aligned_cols=221  Identities=21%  Similarity=0.320  Sum_probs=187.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||+||||++++++|+++|++|++++| +.+..+++.++    ..++.++++|++|++++++++++    +++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4567899999999999999999999999999999 77666554433    34678899999999998887765    478


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||.....++.+.+.++ |++.+++|+.+++.++++++|.+.+++..++||++||..+..+.++...|+++|++
T Consensus        86 id~li~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  164 (261)
T 1gee_A           86 LDVMINNAGLENPVSSHEMSLSD-WNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGG  164 (261)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHH-HHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHHH
Confidence            99999999988766777778887 99999999999999999999999876435799999999998888899999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++.+++.++.+++++||++|.|+||+++|++.......++....+....|++|+.+|+|+|++++||+++.
T Consensus       165 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  235 (261)
T 1gee_A          165 MKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSE  235 (261)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999986542111222223334568899999999999999999863

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=6.9e-40  Score=266.69  Aligned_cols=221  Identities=26%  Similarity=0.404  Sum_probs=188.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHhc----CCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV----GPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~----g~id~l   85 (238)
                      +.++++||||+||||+++|++|+++|++|++++|+.+.++++.+..+ .+.++++|++|+++++++++++    |++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            45789999999999999999999999999999999998888877664 6889999999999998877654    889999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||+....++.+.+.++ |+..+++|+.+++.++++++|.|++++ .++||++||..+..+.++...|++||++++++
T Consensus        84 v~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (281)
T 3m1a_A           84 VNNAGRTQVGAFEETTERE-LRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLSFAGFSAYSATKAALEQL  161 (281)
T ss_dssp             EECCCCEEECCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCChhhCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCCCCCchHHHHHHHHHHHH
Confidence            9999998777888888888 999999999999999999999998877 68999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCC-----CCCcc------CCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS-----DPAKA------GPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~-----~~~~~------~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      +++++.+++++||++|+|+||+++|++......     .+...      .......|.+++.+|+|+|+++++++++..
T Consensus       162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~  240 (281)
T 3m1a_A          162 SEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEK  240 (281)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999998653211     01110      122234678899999999999999988753

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.8e-40  Score=265.47  Aligned_cols=219  Identities=23%  Similarity=0.327  Sum_probs=188.0

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      .++++||||+||||++++++|+++|++|++++|+.++++++.++.     .++.++++|++|++++++++++    ++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            357899999999999999999999999999999998877665433     3578899999999999888765    4789


Q ss_pred             cEEEEccCCCCCCC---CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         83 DVLINNAAVARFDR---FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        83 d~li~~ag~~~~~~---~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      |++|||||.....+   +.+.+.++ |++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|+++|
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQ-FDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAFPGRSAYTTSK  159 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCCCchhHHHHH
Confidence            99999999876554   66677777 999999999999999999999998776 68999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.++++++.+++++||++|.|+||+++|++.......++....+....|++|+++|+|+|++++||+++.
T Consensus       160 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  232 (250)
T 2cfc_A          160 GAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGED  232 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTT
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCch
Confidence            9999999999999999999999999999999986531112222233445678999999999999999999874

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.9e-40  Score=270.72  Aligned_cols=223  Identities=16%  Similarity=0.176  Sum_probs=184.1

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----C
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----G   80 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g   80 (238)
                      ..+.++++||||+||||+++|++|+++|++|++++|+.+.++++.++    ..++.++++|++|+++++++++++    |
T Consensus        28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (301)
T 3tjr_A           28 GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG  107 (301)
T ss_dssp             CSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            34667899999999999999999999999999999999887765443    346889999999999998887654    8


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++..|+||++||..+..+.++...|++||+
T Consensus       108 ~id~lvnnAg~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  186 (301)
T 3tjr_A          108 GVDVVFSNAGIVVAGPLAQMNHDD-WRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKY  186 (301)
T ss_dssp             SCSEEEECCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHH-HHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHH
Confidence            999999999998877888888888 9999999999999999999999988764689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC--------CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS--------DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++++++++.|++++||+||+|+||+++|++......        .......+....+..+..+|+|+|+.++.++.+.
T Consensus       187 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~  266 (301)
T 3tjr_A          187 GVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN  266 (301)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999998653100        0001111112223445679999999998887653

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=6.5e-41  Score=271.20  Aligned_cols=217  Identities=16%  Similarity=0.181  Sum_probs=182.7

Q ss_pred             CcCCCCCCCC--CCchHHHHHHHHhhCCCEEEEecCChHh-HHHHHhhCC-CceEEEeecCCHHHHHHHHHhc----C--
Q psy14567         11 RTNTKGGDYP--KPGIGRCIVEKLSQHEAIIIALSKTQAN-LDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV----G--   80 (238)
Q Consensus        11 ~~~v~~itG~--s~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~----g--   80 (238)
                      +.++++||||  ++|||++++++|+++|++|++++|+.++ ++++.++.+ ++.++++|++|+++++++++++    |  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4578899999  9999999999999999999999999866 466665543 5788999999999998887654    7  


Q ss_pred             -CccEEEEccCCCC-----CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCch
Q psy14567         81 -PVDVLINNAAVAR-----FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTI  154 (238)
Q Consensus        81 -~id~li~~ag~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  154 (238)
                       ++|++|||||+..     ..++.+.+.++ |++.+++|+.+++.++++++|.|.+   .|+||++||..+ .+.+.+..
T Consensus        86 ~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~iss~~~-~~~~~~~~  160 (269)
T 2h7i_A           86 NKLDGVVHSIGFMPQTGMGINPFFDAPYAD-VSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPS-RAMPAYNW  160 (269)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCS-SCCTTTHH
T ss_pred             CCceEEEECCccCccccccccccccCCHHH-HHHHHHHhhHHHHHHHHHHHHhhcc---CCeEEEEcCccc-cccCchHH
Confidence             8999999999875     35667778887 9999999999999999999999864   379999999876 66778899


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC---CCC-------ccCCcccCCCCC-CcCCCCCccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS---DPA-------KAGPMLAKTPLG-RFAGKLKPKP  223 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~---~~~-------~~~~~~~~~~~~-r~~~~~~ia~  223 (238)
                      |++||+++++++++++.|++++||+||+|+||+++|++......   .++       ..+.+....|++ |+++|+|+|+
T Consensus       161 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~dvA~  240 (269)
T 2h7i_A          161 MTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAK  240 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHHHHHH
Confidence            99999999999999999999999999999999999998643210   111       112233567999 7999999999


Q ss_pred             ccccccccc
Q psy14567        224 WNRWLLPSV  232 (238)
Q Consensus       224 ~~~~l~s~~  232 (238)
                      ++.||+|+.
T Consensus       241 ~v~~L~s~~  249 (269)
T 2h7i_A          241 TVCALLSDW  249 (269)
T ss_dssp             HHHHHHSSS
T ss_pred             HHHHHhCch
Confidence            999999974

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1.4e-39  Score=260.58  Aligned_cols=221  Identities=22%  Similarity=0.250  Sum_probs=190.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+.+..+++.++.   .++.++++|++|++++++++++    ++++
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            34567899999999999999999999999999999998877665543   3688999999999999888765    4889


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||.....++.+.+.++ |++.+++|+.+++.+++.++|.+.+++.+++||++||..+..+.++...|+++|+++
T Consensus        84 d~li~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  162 (251)
T 1zk4_A           84 STLVNNAGIAVNKSVEETTTAE-WRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAV  162 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCChhhCCHHH-HHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHHH
Confidence            9999999988777777888887 999999999999999999999998766238999999999988888899999999999


Q ss_pred             HHHHHHHHHHhC--CCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELG--PYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~--~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.++++++.++.  +.||++|.|+||+++|++.... .............|++|+.+|+|+|+++.||+++.
T Consensus       163 ~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  233 (251)
T 1zk4_A          163 RIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNE  233 (251)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-CchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            999999999987  8899999999999999987643 11111222345578899999999999999999874

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=5.2e-41  Score=264.58  Aligned_cols=199  Identities=19%  Similarity=0.243  Sum_probs=177.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.+                +|++|++++++++++++++|++|||||
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------~D~~~~~~v~~~~~~~g~id~lv~nAg   68 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------LDISDEKSVYHYFETIGAFDHLIVTAG   68 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------CCTTCHHHHHHHHHHHCSEEEEEECCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------cCCCCHHHHHHHHHHhCCCCEEEECCC
Confidence            4578899999999999999999999999999999875                899999999999999999999999999


Q ss_pred             CC-CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHH
Q psy14567         91 VA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTM  169 (238)
Q Consensus        91 ~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l  169 (238)
                      +. ...++.+.+.++ |++.+++|+.+++.++++++|.|++   +|+||++||..+..+.++...|+++|++++++++++
T Consensus        69 ~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~l  144 (223)
T 3uce_A           69 SYAPAGKVVDVEVTQ-AKYAFDTKFWGAVLAAKHGARYLKQ---GGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVL  144 (223)
T ss_dssp             CCCCCSCTTTSCHHH-HHHHHHHHHHHHHHHHHHHGGGEEE---EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCcccCCHHH-HHhhheeeeeeHHHHHHHHHhhccC---CeEEEEecchhhccCCCCchHHHHHHHHHHHHHHHH
Confidence            87 556778888888 9999999999999999999999865   479999999999999999999999999999999999


Q ss_pred             HHHhCCCCeEEEEEeCCceecCcccCCCCC--CCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        170 ALELGPYNIRVNSVQPTVVMTQMGRTGWSD--PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       170 ~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +.|+++  ||||+|+||+++|++.......  .+..+......|++|+++|+|+|++++||+++
T Consensus       145 a~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~  206 (223)
T 3uce_A          145 AKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQN  206 (223)
T ss_dssp             HHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHHC
T ss_pred             HHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHccC
Confidence            999988  9999999999999997653211  11223345668999999999999999999985

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.7e-39  Score=261.81  Aligned_cols=219  Identities=26%  Similarity=0.352  Sum_probs=186.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----------CCceEEEeecCCHHHHHHHHHhc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----------PNVQTVQVDLQDWARTRAAVSKV   79 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~~~   79 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.+..+++.++.           .++.++++|++|+++++++++.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            4568899999999999999999999999999999998887766544           35788999999999998877654


Q ss_pred             ----CCc-cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCch
Q psy14567         80 ----GPV-DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTI  154 (238)
Q Consensus        80 ----g~i-d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  154 (238)
                          |++ |++|||||.....++.+.+.++ |+..+++|+.+++.+++++.|.+.+++..|+||++||..+..+.++...
T Consensus        86 ~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  164 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAGITQDEFLLHMSEDD-WDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTN  164 (264)
T ss_dssp             HHHHSSCCSEEEECCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBHH
T ss_pred             HHHhCCCCeEEEECCCcCCCcchhhCCHHH-HHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCChh
Confidence                788 9999999988767777778887 9999999999999999999999987543479999999988888888999


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++|++++.+++.++.+++++||++|+|+||++.|++....  .++....+....|++++++|+|+|+++.|++++.
T Consensus       165 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  240 (264)
T 2pd6_A          165 YAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV--PQKVVDKITEMIPMGHLGDPEDVADVVAFLASED  240 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGGCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc--CHHHHHHHHHhCCCCCCCCHHHHHHHHHHHcCCc
Confidence            999999999999999999999999999999999999987542  2233444555678899999999999999999863

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-40  Score=265.08  Aligned_cols=216  Identities=22%  Similarity=0.233  Sum_probs=184.5

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      ..+..+.++++||||+||||++++++|+++|++|++++|+.+..+++    +...++ +|+  .++++++++++.++|++
T Consensus        13 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~-~D~--~~~~~~~~~~~~~iD~l   85 (249)
T 1o5i_A           13 MELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS----GHRYVV-CDL--RKDLDLLFEKVKEVDIL   85 (249)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT----CSEEEE-CCT--TTCHHHHHHHSCCCSEE
T ss_pred             HHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhh----CCeEEE-eeH--HHHHHHHHHHhcCCCEE
Confidence            34556778899999999999999999999999999999998554433    456677 999  55788888888789999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||.....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|+++|++++++
T Consensus        86 v~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  163 (249)
T 1o5i_A           86 VLNAGGPKAGFFDELTNED-FKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIENLYTSNSARMALTGF  163 (249)
T ss_dssp             EECCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCCCCCCchHHHHHHHHHHH
Confidence            9999988777777888888 999999999999999999999998876 68999999999988888899999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccC-CcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAG-PMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++.|++++||++|+|+||+++|++....  .++... .+....|++|+++|+|+|++++||+++.
T Consensus       164 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~  229 (249)
T 1o5i_A          164 LKTLSFEVAPYGITVNCVAPGWTETERVKEL--LSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEK  229 (249)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCTTHHHH--SCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHhhhcCeEEEEEeeCCCccCccccc--chhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999999999999999986432  111112 3344678999999999999999999873

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=7.6e-40  Score=262.48  Aligned_cols=221  Identities=26%  Similarity=0.370  Sum_probs=189.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCc-eEEEeecCCHHHHHHHHHh---cCCccE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNV-QTVQVDLQDWARTRAAVSK---VGPVDV   84 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~-~~~~~D~~~~~~v~~~~~~---~g~id~   84 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+.++++++.++. .++ .++.+|++|++++++++++   ++++|+
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            34578999999999999999999999999999999998877765543 245 7889999999999888765   488999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCC--chhhHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGH--TIYSASKAAL  162 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~y~~sK~al  162 (238)
                      +|||||.....++.+.+.++ |++.+++|+.+++.++++++|.+.+++ .++||++||..+..+.++.  ..|+++|+++
T Consensus        89 li~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~  166 (254)
T 2wsb_A           89 LVNSAGIARLHDALETDDAT-WRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVNRPQFASSYMASKGAV  166 (254)
T ss_dssp             EEECCCCCCCBCSTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSSCBHHHHHHHHHH
T ss_pred             EEECCccCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCCCCCcchHHHHHHHHH
Confidence            99999988777777888887 999999999999999999999998876 6899999999988777766  8999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.++++++.+++++||+++.|+||++.|++.......++....+....|++|+.+|+|+|++++||+++.
T Consensus       167 ~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  236 (254)
T 2wsb_A          167 HQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPA  236 (254)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999986532212223333445578899999999999999999873

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=1.6e-39  Score=261.40  Aligned_cols=220  Identities=25%  Similarity=0.325  Sum_probs=187.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.+..+++.++    ..++.++++|++|++++++++++    ++++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            457889999999999999999999999999999998776554332    45688999999999999888765    4789


Q ss_pred             cEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCC--chhhHHH
Q psy14567         83 DVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGH--TIYSASK  159 (238)
Q Consensus        83 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~y~~sK  159 (238)
                      |++|||||... ..++.+.+.++ |+..+++|+.+++.+++++.|.|.+++ .++||++||..+..+.++.  ..|+++|
T Consensus        92 d~vi~~Ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~Y~~sK  169 (260)
T 3awd_A           92 DILVACAGICISEVKAEDMTDGQ-WLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNRPQQQAAYNASK  169 (260)
T ss_dssp             CEEEECCCCCCCSCCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSSCCHHHHHHH
T ss_pred             CEEEECCCCCCCCCCcccCCHHH-HHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccCCCCCccccHHHH
Confidence            99999999876 56677778887 999999999999999999999998766 6899999999988776666  8999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.++++++.+++++||++|.|+||+++|++.......++....+....|++|+.+|+|+|+++.||+++.
T Consensus       170 ~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  242 (260)
T 3awd_A          170 AGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDA  242 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999987511112223333445678899999999999999999863

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1.7e-40  Score=277.02  Aligned_cols=219  Identities=11%  Similarity=-0.046  Sum_probs=178.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhh-CCCEEEEecCChHh---------------HH-HHHhhCCCceEEEeecCCHHHH
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQ-HEAIIIALSKTQAN---------------LD-SLKQAFPNVQTVQVDLQDWART   72 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~-~G~~V~~~~r~~~~---------------~~-~~~~~~~~~~~~~~D~~~~~~v   72 (238)
                      ...++++||||++|||+++|+.|++ +|++|++++|+.+.               .+ .+.+....+..+.+|+++++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4578899999999999999999999 99999999876532               12 3344445688899999999999


Q ss_pred             HHHHHh----cCCccEEEEccCCC-------------CCCCC---------------------CCCChHHHHHHHHHHHH
Q psy14567         73 RAAVSK----VGPVDVLINNAAVA-------------RFDRF---------------------LDIDEENLIDSIFDVNI  114 (238)
Q Consensus        73 ~~~~~~----~g~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~~n~  114 (238)
                      ++++++    +|++|+||||||..             ...++                     .+.+.++ |++.+++|.
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee-~~~~v~Vn~  203 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSE-IDSTVAVMG  203 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHH-HHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHH-HHHHHHhhc
Confidence            887754    59999999999975             22344                     5667787 999999999


Q ss_pred             HHHH-HHHHHHHHHHHhccCCceEEEEccccccccCCCC--chhhHHHHHHHHHHHHHHHHhCCC-CeEEEEEeCCceec
Q psy14567        115 KAVI-NISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGH--TIYSASKAALDSITRTMALELGPY-NIRVNSVQPTVVMT  190 (238)
Q Consensus       115 ~~~~-~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~y~~sK~al~~l~~~l~~~~~~~-~i~v~~i~PG~v~t  190 (238)
                      .+.+ ++++++.+....++ +|+||++||+.+..+.+.+  ..|++||+++.+++|+++.|++++ |||||+|+||+++|
T Consensus       204 ~~~~~~~~~~~~~~~m~~~-gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T  282 (405)
T 3zu3_A          204 GEDWQMWIDALLDAGVLAE-GAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVS  282 (405)
T ss_dssp             SHHHHHHHHHHHHHTCEEE-EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCC
T ss_pred             hhHHHHHHHHHHHHhhhhC-CcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcC
Confidence            9998 77888765433333 5899999999999888877  999999999999999999999999 99999999999999


Q ss_pred             CcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        191 QMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++.......+......  ..|++|.++|+|+++.+.||+|+.
T Consensus       283 ~~s~~ip~~p~y~~~l--~~~mkr~G~~Ed~a~~i~~L~sd~  322 (405)
T 3zu3_A          283 QASSAIPMMPLYLSLL--FKVMKEKGTHEGCIEQVYSLYKDS  322 (405)
T ss_dssp             HHHHTSTTHHHHHHHH--HHHHHHHTCCCCHHHHHHHHHHHT
T ss_pred             chhhcCCCCcHHHHHH--HHHHhcCCCcHHHHHHHHHHHhcc
Confidence            9976543222221111  127999999999999999999984

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=6.5e-41  Score=281.96  Aligned_cols=218  Identities=12%  Similarity=-0.019  Sum_probs=176.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhh-CCCEEEEecCChHhH----------------HHHHhhCCCceEEEeecCCHHHHH
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQ-HEAIIIALSKTQANL----------------DSLKQAFPNVQTVQVDLQDWARTR   73 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~-~G~~V~~~~r~~~~~----------------~~~~~~~~~~~~~~~D~~~~~~v~   73 (238)
                      ..++++||||++|||+++|+.|++ +|++|++++|+.+..                +.+.+.......+++|++++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            477899999999999999999999 999999998875431                334444556888999999999987


Q ss_pred             HHH----Hhc-CCccEEEEccCCC-------------CCCCC---------------------CCCChHHHHHHHHHHHH
Q psy14567         74 AAV----SKV-GPVDVLINNAAVA-------------RFDRF---------------------LDIDEENLIDSIFDVNI  114 (238)
Q Consensus        74 ~~~----~~~-g~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~~n~  114 (238)
                      +++    +++ |++|+||||||+.             ...++                     .+.+.++ |++.+++|.
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~-~~~~v~Vn~  218 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQE-IEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHH-HHHHHHHHS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHH-HHHHHHhhc
Confidence            776    456 9999999999972             22333                     2466777 999999999


Q ss_pred             HHHH-HHHHHHHHHHHhccCCceEEEEccccccccCCCC--chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecC
Q psy14567        115 KAVI-NISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGH--TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ  191 (238)
Q Consensus       115 ~~~~-~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~  191 (238)
                      .+.+ .+++++.+.+..++ +|+||++||+.+..+.+.+  .+|++||+|+.+|+++++.|++++|||||+|+||+++|+
T Consensus       219 ~~~~~~~~~a~~~~~m~~~-gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~  297 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLAD-GARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQ  297 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEEE-EEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred             hhHHHHHHHHHHHHHHhhC-CCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcCh
Confidence            9887 77888766443333 5899999999998877755  899999999999999999999999999999999999999


Q ss_pred             cccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        192 MGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.......+....  ....|++|.++|+|+++.+.||+|+.
T Consensus       298 ~~~~ip~~~~~~~--~~~~~m~r~G~pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          298 ASAAIPVMPLYIS--MVYKIMKEKGLHEGTIEQLDRLFRER  336 (422)
T ss_dssp             TGGGSTHHHHHHH--HHHHHHHHTTCCCCHHHHHHHHHHHT
T ss_pred             hhhcCCCChHHHH--HHHhhhcCCcChHHHHHHHHHHhcch
Confidence            9865432222111  11238999999999999999999985

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=3.2e-39  Score=260.41  Aligned_cols=219  Identities=21%  Similarity=0.271  Sum_probs=182.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+.++.+++.++. .++.++++|++|++++++++++    ++++|+
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            35578999999999999999999999999999999988777765543 4688999999999999888764    478999


Q ss_pred             EEEccCCCCCCCCCC------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCceEEEEccccccccCCCCc
Q psy14567         85 LINNAAVARFDRFLD------IDEENLIDSIFDVNIKAVINISQVVSKTMIDHK-----IQGSIVNVSSIAGKTALEGHT  153 (238)
Q Consensus        85 li~~ag~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~  153 (238)
                      +|||||.....+..+      .+.++ |++.+++|+.+++.+++++.|.|.++.     ..++||++||..+..+.++..
T Consensus        90 li~~Ag~~~~~~~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  168 (265)
T 2o23_A           90 AVNCAGIAVASKTYNLKKGQTHTLED-FQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA  168 (265)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHH-HHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred             EEECCccCCCCccccccccCCCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCc
Confidence            999999876544433      56676 999999999999999999999998761     268999999999988888899


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCC-CCcCCCCCccccccccccc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPL-GRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~ia~~~~~l~s~  231 (238)
                      .|+++|++++.+++.++.+++++||++|+|+||+++|++....  .++.........|+ +|+.+|+|+|+.++||+++
T Consensus       169 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  245 (265)
T 2o23_A          169 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN  245 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc--CHHHHHHHHHcCCCcCCCCCHHHHHHHHHHHhhc
Confidence            9999999999999999999999999999999999999987542  22223333455677 8999999999999999875

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=3.9e-41  Score=279.94  Aligned_cols=217  Identities=19%  Similarity=0.146  Sum_probs=177.4

Q ss_pred             cCCCCCCCCCC--chHHHHHHHHhhCCCEEEEecCCh---------HhHHHHHhhC-------CCceEEEeecCCH--H-
Q psy14567         12 TNTKGGDYPKP--GIGRCIVEKLSQHEAIIIALSKTQ---------ANLDSLKQAF-------PNVQTVQVDLQDW--A-   70 (238)
Q Consensus        12 ~~v~~itG~s~--gIG~~ia~~l~~~G~~V~~~~r~~---------~~~~~~~~~~-------~~~~~~~~D~~~~--~-   70 (238)
                      .++++||||++  |||+++|++|+++|++|++++|++         ++.+......       ....++++|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            57899999986  999999999999999999776654         2222222111       1267889999887  6 


Q ss_pred             -----------------HHHHHHH----hcCCccEEEEccCCC--CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14567         71 -----------------RTRAAVS----KVGPVDVLINNAAVA--RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT  127 (238)
Q Consensus        71 -----------------~v~~~~~----~~g~id~li~~ag~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  127 (238)
                                       +++++++    ++|++|++|||||+.  ...++.+.+.++ |++++++|+.+++.++++++|+
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKG-YLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHH
Confidence                             7766664    458999999999974  356777888888 9999999999999999999999


Q ss_pred             HHhccCCceEEEEccccccccCCCCc-hhhHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCCceecCcccCCCCCCC----
Q psy14567        128 MIDHKIQGSIVNVSSIAGKTALEGHT-IYSASKAALDSITRTMALELGP-YNIRVNSVQPTVVMTQMGRTGWSDPA----  201 (238)
Q Consensus       128 ~~~~~~~g~iv~isS~~~~~~~~~~~-~y~~sK~al~~l~~~l~~~~~~-~~i~v~~i~PG~v~t~~~~~~~~~~~----  201 (238)
                      |.++   |+||++||..+..+.++.. .|++||+|+.+|+++++.|+++ +||+||+|+||+++|+|........+    
T Consensus       161 m~~~---g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~  237 (329)
T 3lt0_A          161 MKPQ---SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             EEEE---EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC--------
T ss_pred             HhhC---CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccc
Confidence            9763   7999999999999988885 9999999999999999999998 89999999999999999765421100    


Q ss_pred             ---------------------------------------ccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        202 ---------------------------------------KAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       202 ---------------------------------------~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                                                             ..+......|++|+++|+|+|++++||+|+.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~  307 (329)
T 3lt0_A          238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRE  307 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGG
T ss_pred             cccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCch
Confidence                                                   0222345689999999999999999999974

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=4.4e-39  Score=258.14  Aligned_cols=219  Identities=23%  Similarity=0.303  Sum_probs=188.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+.+..+++.++    .+++.++.+|++|++++++++++    +++
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4557889999999999999999999999999999998876654433    45688899999999999888764    478


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||.....++ +.+.++ |+..+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|+++|++
T Consensus        89 ~d~vi~~Ag~~~~~~~-~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  165 (255)
T 1fmc_A           89 VDILVNNAGGGGPKPF-DMPMAD-FRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSKAA  165 (255)
T ss_dssp             CCEEEECCCCCCCCCT-TCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCC-CCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCCCCcccHHHHHH
Confidence            9999999998765555 667777 999999999999999999999998776 6899999999998888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++.+++.++.+++++||++|.++||++.|++..... .++.........|++++++|+|+|+++.|++++.
T Consensus       166 ~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  235 (255)
T 1fmc_A          166 ASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPA  235 (255)
T ss_dssp             HHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc-ChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCc
Confidence            999999999999999999999999999999865432 2223333445678899999999999999999863

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-39  Score=263.45  Aligned_cols=218  Identities=27%  Similarity=0.377  Sum_probs=185.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++++++.++    ..++.++.+|++|++++++++++    ++++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            356899999999999999999999999999999998876655443    34688899999999999888765    4889


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||+....++.+.+.++ |+..+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|+++|+++
T Consensus       123 d~li~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~asK~a~  200 (285)
T 2c07_A          123 DILVNNAGITRDNLFLRMKNDE-WEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSSSKAGV  200 (285)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHH-HHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCchhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCCCCchHHHHHHHH
Confidence            9999999988777777888887 999999999999999999999998766 68999999999888888899999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.++++++.++++.||++|.|+||+++|++....  .++.........|.+|+.+|+|+|+++.||+++.
T Consensus       201 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~  268 (285)
T 2c07_A          201 IGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDK  268 (285)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc--CHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCC
Confidence            9999999999999999999999999999986542  1222223344578899999999999999999874

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=2.6e-39  Score=257.86  Aligned_cols=213  Identities=23%  Similarity=0.327  Sum_probs=184.0

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEE-ecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIA-LSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      ++++||||+||||++++++|+++|++|++ .+|+.+..+++.++    ..++.++++|++|++++++++++    ++++|
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            56899999999999999999999999998 48988776654433    34688899999999999888765    48899


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||.....++.+.+.++ |++.+++|+.+++.+++++.|.|.+++ .++||++||..+..+.++...|+++|++++
T Consensus        82 ~li~~Ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (244)
T 1edo_A           82 VVVNNAGITRDTLLIRMKKSQ-WDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCcCcccCCHHH-HHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcCCCCCCccchhhHHHHH
Confidence            999999988766777778887 999999999999999999999998766 689999999988888888999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLL  229 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~  229 (238)
                      ++++.++.+++++||++|.|+||+++|++....  .++.........|++|+.+|+|+|+++.||+
T Consensus       160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  223 (244)
T 1edo_A          160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLA  223 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhcCCEEEEEeeCccccchhhhc--ChHHHHHHhhcCCCCCCCCHHHHHHHHHHHh
Confidence            999999999999999999999999999987542  1222223344568899999999999999998

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-39  Score=259.79  Aligned_cols=220  Identities=23%  Similarity=0.286  Sum_probs=184.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHH----HHhh-CCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQA-FPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~----~~~~-~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+.++.++    +.+. ..++.++++|++|++++++++++    ++
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   91 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            345688999999999999999999999999999997554332    3222 34688999999999999887765    48


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCC-------CCc
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALE-------GHT  153 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-------~~~  153 (238)
                      ++|++|||||.....++.+.+.++ |+..+++|+.+++.++++++|.+.+++..++||++||..+..+.+       +..
T Consensus        92 ~id~li~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~  170 (265)
T 1h5q_A           92 PISGLIANAGVSVVKPATELTHED-FAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQV  170 (265)
T ss_dssp             SEEEEEECCCCCCCSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCH
T ss_pred             CCCEEEECCCcCCCCchhhCCHHH-HHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccccccccccc
Confidence            899999999988777777778887 999999999999999999999998765348999999988765543       267


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .|+++|++++.++++++.+++++||++|.|+||+++|++....  .++.........|++|+.+|+|+|+++.||+++.
T Consensus       171 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  247 (265)
T 1h5q_A          171 FYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDH  247 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGG
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc--chhHHHHHHhcCcccCCCCHHHHHHHHHhhccCc
Confidence            9999999999999999999999999999999999999987653  2222223344578899999999999999999874

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.4e-39  Score=261.21  Aligned_cols=214  Identities=21%  Similarity=0.247  Sum_probs=176.4

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh---hCCCceEEEeecCCHHHH-HHHHHhcCCccEEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ---AFPNVQTVQVDLQDWART-RAAVSKVGPVDVLIN   87 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~D~~~~~~v-~~~~~~~g~id~li~   87 (238)
                      +++++||||++|||++++++|+++|++|++++|+.++.+++.+   ...++..+  |..+.+.+ +++.+++|++|++||
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~g~iD~lv~   78 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAYGQVDVLVS   78 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHhCCCCEEEE
Confidence            3678999999999999999999999999999999877655432   23334333  55544332 334456689999999


Q ss_pred             ccCCC-CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         88 NAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        88 ~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      |||+. ...++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|++||+++++|+
T Consensus        79 nAg~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~  156 (254)
T 1zmt_A           79 NDIFAPEFQPIDKYAVED-YRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKELSTYTSARAGACTLA  156 (254)
T ss_dssp             ECCCCCCCCCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccCCCCchHHHHHHHHHHHHH
Confidence            99987 666777788888 999999999999999999999998776 689999999999988889999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCce---------ecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVV---------MTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.|++++||+||+|+||++         +|++...   .++....+....|++|+++|+|+|++++||+++.
T Consensus       157 ~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~  228 (254)
T 1zmt_A          157 NALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---NPEHVAHVKKVTALQRLGTQKELGELVAFLASGS  228 (254)
T ss_dssp             HHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT---CHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTS
T ss_pred             HHHHHHhhhcCcEEEEEecCccccccccccCCCccccc---ChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999         7776532   1122222344578999999999999999999874

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=7.4e-39  Score=263.07  Aligned_cols=222  Identities=18%  Similarity=0.224  Sum_probs=185.5

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh-----CCCceEEEeecCCHHHHHHHHHhc----C
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA-----FPNVQTVQVDLQDWARTRAAVSKV----G   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~----g   80 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+.++++++.++     ..++.++++|++|+++++++++++    +
T Consensus        24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            3557899999999999999999999999999999998877655443     456889999999999998887654    8


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||+....++.+.+.++ |+..+++|+.+++.++++++|.+.++...++||++||..+..+.++...|++||+
T Consensus       104 ~id~li~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  182 (302)
T 1w6u_A          104 HPNIVINNAAGNFISPTERLSPNA-WKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKA  182 (302)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCCCccccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHHH
Confidence            999999999987666777778887 9999999999999999999999974433689999999998888888999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecC-cccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQ-MGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++.++++++.+++++||++|.|+||+++|+ +.............+....|++|+++|+|+|+++.||+++.
T Consensus       183 a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~  255 (302)
T 1w6u_A          183 GVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDY  255 (302)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCc
Confidence            9999999999999999999999999999998 43332111111123345678999999999999999999863

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=4.9e-40  Score=262.55  Aligned_cols=214  Identities=21%  Similarity=0.246  Sum_probs=158.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHH---HHHHHhcCCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWART---RAAVSKVGPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v---~~~~~~~g~id~li~   87 (238)
                      +.++++||||++|||+++|++|++ |++|++++|+.+.++++.+ ..++.++.+|++++++.   .+.+++++++|++||
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~   81 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-IEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH   81 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-STTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-hcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence            457889999999999999999998 9999999999999888776 56788999999988653   223355689999999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHH
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITR  167 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~  167 (238)
                      |||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++  |+||++||..+..+.++...|++||+++++|++
T Consensus        82 ~Ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  158 (245)
T 3e9n_A           82 AAAVARDTTIEAGSVAE-WHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNGPHPGNTIYAASKHALRGLAD  158 (245)
T ss_dssp             CC----------CHHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC----------CHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCchhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccccCCCCchHHHHHHHHHHHHHH
Confidence            99998777777778887 999999999999999999999997754  899999999999999999999999999999999


Q ss_pred             HHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccccc
Q psy14567        168 TMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLN  235 (238)
Q Consensus       168 ~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~~  235 (238)
                      +++.+++++||++|+|+||+++|++........      ....+.+++.+|+|+|++++||+++....
T Consensus       159 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~p~dvA~~i~~l~~~~~~~  220 (245)
T 3e9n_A          159 AFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ------GTNFRPEIYIEPKEIANAIRFVIDAGETT  220 (245)
T ss_dssp             HHHHHHGGGTCEEEEEEECCC----------------------CCGGGSCHHHHHHHHHHHHTSCTTE
T ss_pred             HHHHHhhhcCeEEEEEecCCccCchhhhhhhhh------hcccccccCCCHHHHHHHHHHHHcCCCcc
Confidence            999999999999999999999999976532221      22346688999999999999999885443

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=1.1e-39  Score=266.95  Aligned_cols=216  Identities=19%  Similarity=0.183  Sum_probs=174.1

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      .+...+.++++||||+||||++++++|+++|++|++++|+.++.+++.++.+ ++.++++|++|++++++++++++++|+
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~   89 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADV   89 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEE
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCE
Confidence            4445567889999999999999999999999999999999999888877664 588999999999999999999999999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-------------CCC
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-------------LEG  151 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------~~~  151 (238)
                      +|||||+..+  ..+.+.++ |+.++++|+.+++.++++++|.+.     .+||++||..+..+             .++
T Consensus        90 lv~nAg~~~~--~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~-----~riv~isS~~~~~~~~~~~~~~~~~~~~~~  161 (291)
T 3rd5_A           90 LINNAGIMAV--PYALTVDG-FESQIGTNHLGHFALTNLLLPRLT-----DRVVTVSSMAHWPGRINLEDLNWRSRRYSP  161 (291)
T ss_dssp             EEECCCCCSC--CCCBCTTS-CBHHHHHHTHHHHHHHHHHGGGEE-----EEEEEECCGGGTTCCCCSSCTTCSSSCCCH
T ss_pred             EEECCcCCCC--cccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHH-----hheeEeechhhccCCCCcccccccccCCCC
Confidence            9999998753  34556666 899999999999999999999885     38999999987654             234


Q ss_pred             CchhhHHHHHHHHHHHHHHHHhCCCC--eEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCC-CCCcccccccc
Q psy14567        152 HTIYSASKAALDSITRTMALELGPYN--IRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAG-KLKPKPWNRWL  228 (238)
Q Consensus       152 ~~~y~~sK~al~~l~~~l~~~~~~~~--i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~-~~~ia~~~~~l  228 (238)
                      ...|++||+++++|++.++.+++++|  |++|+|+||+++|++.+...   +.........|.+|+.. |+|+|+.++||
T Consensus       162 ~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~A~~~~~l  238 (291)
T 3rd5_A          162 WLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASG---RKLGDALMSAATRVVATDADFGARQTLYA  238 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------CHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccc---hHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            56899999999999999999998877  99999999999999976531   11222333467788776 99999999999


Q ss_pred             cccc
Q psy14567        229 LPSV  232 (238)
Q Consensus       229 ~s~~  232 (238)
                      +++.
T Consensus       239 ~~~~  242 (291)
T 3rd5_A          239 ASQD  242 (291)
T ss_dssp             HHSC
T ss_pred             HcCC
Confidence            9983

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=2.9e-38  Score=250.48  Aligned_cols=207  Identities=21%  Similarity=0.240  Sum_probs=175.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLIN   87 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~li~   87 (238)
                      .++++||||+||||++++++|+++|++|++++|+.++++++.++.+++.++++|++|+++++++++++    +++|++||
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN   84 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            35789999999999999999999999999999999988888877778889999999999998877654    88999999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHH
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITR  167 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~  167 (238)
                      |||+....++.+.+.++ |+..+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|+++|++++.+++
T Consensus        85 ~Ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~  162 (234)
T 2ehd_A           85 NAGVGVMKPVHELTLEE-WRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAG  162 (234)
T ss_dssp             CCCCCCCSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCCCCCCchhhHHHHHHHHHHH
Confidence            99988767777778887 999999999999999999999998766 6899999999998888889999999999999999


Q ss_pred             HHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        168 TMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       168 ~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      +++.+++++||++|.|+||+++|++....  ...    +       ...+|+|+|++++|++++..
T Consensus       163 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~----~-------~~~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          163 AAMLDLREANVRVVNVLPGSVDTGFAGNT--PGQ----A-------WKLKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             HHHHHHGGGTEEEEEEECC-----------------------------CCHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHhhcCcEEEEEEeCCCcCCccccc--ccc----c-------CCCCHHHHHHHHHHHhCCCc
Confidence            99999999999999999999999986431  111    0       14699999999999998753

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=1.2e-38  Score=263.87  Aligned_cols=223  Identities=20%  Similarity=0.206  Sum_probs=177.1

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----C--CceEEEeecCCHHHHHHHHHhc---
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----P--NVQTVQVDLQDWARTRAAVSKV---   79 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~v~~~~~~~---   79 (238)
                      ..+.++++||||+||||++++++|+++|++|++++|+.++++++.+++    .  .+.++++|++++++++++++++   
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            345678999999999999999999999999999999998877654433    3  6888999999999998888654   


Q ss_pred             -CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCceEEEEccccccccCCCCc
Q psy14567         80 -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH-----KIQGSIVNVSSIAGKTALEGHT  153 (238)
Q Consensus        80 -g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~~~~  153 (238)
                       |++|+||||||+....++.+.+.++ |+.++++|+.+++.++++++|.+.++     ...|+||++||..+..+.++..
T Consensus        85 ~g~id~lv~nAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~  163 (319)
T 3ioy_A           85 FGPVSILCNNAGVNLFQPIEESSYDD-WDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPG  163 (319)
T ss_dssp             TCCEEEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSH
T ss_pred             CCCCCEEEECCCcCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCH
Confidence             8999999999998878888888888 99999999999999999999999875     1268999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCC---------cccCCCC-CCcCCCCCccc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGP---------MLAKTPL-GRFAGKLKPKP  223 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~-~r~~~~~~ia~  223 (238)
                      .|++||+|+++|+++++.++.++||++++|+||+|+|++.......+.....         .....+. ....+|+++|+
T Consensus       164 ~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~  243 (319)
T 3ioy_A          164 IYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGA  243 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHH
Confidence            9999999999999999999999999999999999999987543221111100         0000011 11268999999


Q ss_pred             ccccccccc
Q psy14567        224 WNRWLLPSV  232 (238)
Q Consensus       224 ~~~~l~s~~  232 (238)
                      .++..+.+.
T Consensus       244 ~~~~al~~~  252 (319)
T 3ioy_A          244 RVIEAMKAN  252 (319)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHcC
Confidence            988876553

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-38  Score=251.71  Aligned_cols=209  Identities=24%  Similarity=0.291  Sum_probs=182.9

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC-------EEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh--
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA-------IIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK--   78 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~--   78 (238)
                      .++++||||+||||++++++|+++|+       +|++++|+.+.++++.++    ..++.++++|++|++++++++++  
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999       999999998887766544    34588899999999999888765  


Q ss_pred             --cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         79 --VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        79 --~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                        ++++|++|||||.....++.+.+.++ |+..+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|+
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~  159 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFGALSDLTEED-FDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIYC  159 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhCCCCCEEEEcCCcCCcCccccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCCCCCCchhH
Confidence              47899999999988777777778887 999999999999999999999998766 68999999999988888899999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      ++|+++++++++++.+++++||++|.|+||+++|++......  +.         ..++.+|+|+|+.++|++++..
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~---------~~~~~~~~dva~~~~~l~~~~~  225 (244)
T 2bd0_A          160 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD--EM---------QALMMMPEDIAAPVVQAYLQPS  225 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS--TT---------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc--cc---------cccCCCHHHHHHHHHHHHhCCc
Confidence            999999999999999999999999999999999998754211  10         1378899999999999998743

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.3e-38  Score=258.80  Aligned_cols=218  Identities=20%  Similarity=0.270  Sum_probs=182.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+.+..+++.+.    ..++.++++|++|++++++++++    +++
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT  111 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            4557899999999999999999999999999999987665544332    34688999999999999887765    488


Q ss_pred             ccEEEEccCCCCC-CCCC-CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc--CCCCchhhH
Q psy14567         82 VDVLINNAAVARF-DRFL-DIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA--LEGHTIYSA  157 (238)
Q Consensus        82 id~li~~ag~~~~-~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--~~~~~~y~~  157 (238)
                      +|++|||||+... .++. +.+.++ |++.+++|+.+++.+++.++|.+.+++ .++||++||..+..+  .++...|++
T Consensus       112 id~li~~Ag~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~Y~~  189 (279)
T 3ctm_A          112 IDVFVANAGVTWTQGPEIDVDNYDS-WNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVNIPQLQAPYNT  189 (279)
T ss_dssp             CSEEEECGGGSTTC--CCCSSHHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC---CCHHHHHH
T ss_pred             CCEEEECCcccccCCcccccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCCCCCCcccHHH
Confidence            9999999998765 5555 566666 999999999999999999999998776 689999999998877  777889999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|++++.++++++.+++++| ++|.|+||+++|++....  .++....+....|++|+.+|+|+|+.++||+++.
T Consensus       190 sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~  261 (279)
T 3ctm_A          190 AKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA--SKDMKAKWWQLTPLGREGLTQELVGGYLYLASNA  261 (279)
T ss_dssp             HHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC--CHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc--ChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999 999999999999987431  2222223335578999999999999999999874

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=7.5e-39  Score=255.75  Aligned_cols=218  Identities=27%  Similarity=0.367  Sum_probs=187.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh-----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA-----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++.+++.++     ..++.++.+|++|++++++++++    +++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            456789999999999999999999999999999998877665442     34688899999999999888765    478


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||.....++.+.+.++ |++.+++|+.+++.++++++|.+.+++ .++||++||..+..+.++...|+++|++
T Consensus        86 ~d~vi~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  163 (248)
T 2pnf_A           86 IDILVNNAGITRDKLFLRMSLLD-WEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGNVGQVNYSTTKAG  163 (248)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCccccCCHHH-HHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCCCCCchHHHHHHH
Confidence            99999999988766677777887 999999999999999999999998776 6899999999888888888999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++.+++.++.+++++||++|.++||+++|++....  .++....+....|.+++.+|+|+|+++.|++++.
T Consensus       164 ~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  232 (248)
T 2pnf_A          164 LIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL--SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSEL  232 (248)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc--cHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999987542  1122222334568899999999999999999863

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=3.9e-39  Score=257.37  Aligned_cols=218  Identities=28%  Similarity=0.370  Sum_probs=165.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEe-cCChHhHHHHHh----hCCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIAL-SKTQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||+||||++++++|+++|++|+++ .|+++..+++.+    ...++.++++|++|++++++++++    +++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            34678999999999999999999999999998 677665554433    245688999999999999887765    478


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|||||.....++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|+++|++
T Consensus        84 ~d~vi~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  161 (247)
T 2hq1_A           84 IDILVNNAGITRDTLMLKMSEKD-WDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNAGQANYAASKAG  161 (247)
T ss_dssp             CCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC---------CHHHHHHHHH
T ss_pred             CCEEEECCCCCCCCccccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCCCCcHhHHHHHH
Confidence            99999999987666666777777 899999999999999999999998766 6899999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++.++++++.+++++||++|.++||+++|++....  .++....+....|++++.+|+|+|+++.|++++.
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  230 (247)
T 2hq1_A          162 LIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL--PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDD  230 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc--chHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999986542  1222223334568899999999999999999863

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.2e-38  Score=258.71  Aligned_cols=219  Identities=20%  Similarity=0.271  Sum_probs=185.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh---------CCCceEEEeecCCHHHHHHHHHh---
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA---------FPNVQTVQVDLQDWARTRAAVSK---   78 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---------~~~~~~~~~D~~~~~~v~~~~~~---   78 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.+.++++.++         ..++.++++|++|++++++++++   
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999998876655433         34688999999999999888765   


Q ss_pred             -cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhH
Q psy14567         79 -VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSA  157 (238)
Q Consensus        79 -~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~  157 (238)
                       +|++|++|||||.....++.+.+.++ |++.+++|+.+++.++++++|.+.+++ .++||++||.. ..+.++...|++
T Consensus        97 ~~g~id~li~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~~~~~~~~Y~~  173 (303)
T 1yxm_A           97 TFGKINFLVNNGGGQFLSPAEHISSKG-WHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KAGFPLAVHSGA  173 (303)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TTCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCchhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-ccCCCcchhhHH
Confidence             48899999999987666677777787 999999999999999999999765555 68999999998 677788899999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC--CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS--DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+++.+++++++.++.++||++|+|+||++.|++......  .++.........|++|+.+|+|+|++++||+++.
T Consensus       174 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~~~  250 (303)
T 1yxm_A          174 ARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPA  250 (303)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999995322111  1233444556678999999999999999999864

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=5.5e-39  Score=276.77  Aligned_cols=217  Identities=21%  Similarity=0.256  Sum_probs=182.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH--hHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CC-cc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA--NLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GP-VD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~-id   83 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+..  .+++..+.. ...++.||++|+++++++++++    ++ +|
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~-~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV-GGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH-TCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-CCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            5679999999999999999999999999999998643  344443333 4678999999999998887654    54 99


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||+.....+.+++.++ |++++++|+.+++++.+++.|.|.+++ .++||++||..+..+.++...|+++|++++
T Consensus       291 ~lV~nAGv~~~~~~~~~~~~~-~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~g~~g~~~YaasKaal~  368 (454)
T 3u0b_A          291 ILVNNAGITRDKLLANMDEKR-WDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAGNRGQTNYATTKAGMI  368 (454)
T ss_dssp             EEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred             EEEECCcccCCCccccCCHHH-HHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCCCCCCCHHHHHHHHHHH
Confidence            999999999888888888888 999999999999999999999987766 789999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+++++.+++++||++|+|+||+++|+|......  ...+......|++|.++|+|+|+++.||+|+.
T Consensus       369 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~l~r~g~pedvA~~v~fL~s~~  435 (454)
T 3u0b_A          369 GLAEALAPVLADKGITINAVAPGFIETKMTEAIPL--ATREVGRRLNSLFQGGQPVDVAELIAYFASPA  435 (454)
T ss_dssp             HHHHHHHHHHHTTTCEEEEEEECSBCC------------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGG
T ss_pred             HHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcch--hhHHHHHhhccccCCCCHHHHHHHHHHHhCCc
Confidence            99999999999999999999999999999765321  11222334568899999999999999999974

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=1.2e-38  Score=254.14  Aligned_cols=216  Identities=24%  Similarity=0.345  Sum_probs=185.3

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEe-cCChHhHHHHHhh----CCCceE-EEeecCCHHHHHHHHHh----cCCc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIAL-SKTQANLDSLKQA----FPNVQT-VQVDLQDWARTRAAVSK----VGPV   82 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~----~~~~~~-~~~D~~~~~~v~~~~~~----~g~i   82 (238)
                      ++++||||+||||++++++|+++|++|+++ +|+.++.+++.++    ..++.. +.+|++|++++++++++    ++++
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL   81 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999999999999998 8998876655433    345666 89999999999888765    4889


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |++|||||+....++.+.+.++ |++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|+++|+++
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~-~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  159 (245)
T 2ph3_A           82 DTLVNNAGITRDTLLVRMKDED-WEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGNPGQANYVASKAGL  159 (245)
T ss_dssp             CEEEECCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCSSBHHHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcccCCHHH-HHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCCCCCcchHHHHHHH
Confidence            9999999988766677778887 999999999999999999999998776 68999999998888888889999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++.++.+++++||++|.|+||+++|++....  .++....+....|.+++.+|+|+|+++.+++++.
T Consensus       160 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  227 (245)
T 2ph3_A          160 IGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL--PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEK  227 (245)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999987542  1222223334568899999999999999999874

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=3.2e-38  Score=280.46  Aligned_cols=209  Identities=23%  Similarity=0.285  Sum_probs=173.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh--HhHHHHHhhCCCceEEEeec-CCHHH-HHHHHHhcCCccEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ--ANLDSLKQAFPNVQTVQVDL-QDWAR-TRAAVSKVGPVDVL   85 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~D~-~~~~~-v~~~~~~~g~id~l   85 (238)
                      .+.++++||||++|||+++|++|+++|++|++.+|..  +..+++.+.......+.+|+ ++.+. ++++.+++|++|++
T Consensus       320 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiL  399 (604)
T 2et6_A          320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDIL  399 (604)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred             cCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEE
Confidence            3557899999999999999999999999999998642  22345544445567778899 55544 34455677999999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||+....++.+++.++ |++++++|+.+++.++++++|+|++++ .|+||++||..+..+.++...|++||+|+.+|
T Consensus       400 VnNAGi~~~~~~~~~~~~~-~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~~~~~~~~Y~asKaal~~l  477 (604)
T 2et6_A          400 VNNAGILRDRSFAKMSKQE-WDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYGNFGQANYSSSKAGILGL  477 (604)
T ss_dssp             EECCCCCCCBCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCTTBHHHHHHHHHHHHH
T ss_pred             EECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCCCChhHHHHHHHHHHH
Confidence            9999998777888899888 999999999999999999999998876 79999999999999989999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++.|++++|||||+|+||+ +|+|....... +          ..+..+|+|+|+.+.||+|+.
T Consensus       478 t~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~-~----------~~~~~~pe~vA~~v~~L~s~~  532 (604)
T 2et6_A          478 SKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE-Q----------DKNLYHADQVAPLLVYLGTDD  532 (604)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECC-CCCC--------------------CCSSCGGGTHHHHHHTTSTT
T ss_pred             HHHHHHHhCccCeEEEEEcCCC-CCccccccCch-h----------hccCCCHHHHHHHHHHHhCCc
Confidence            9999999999999999999996 99987542211 1          123469999999999999974

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.3e-38  Score=262.48  Aligned_cols=182  Identities=21%  Similarity=0.288  Sum_probs=155.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC-----hHhHHHHHh----hCCCceEEEeecCCHHHHHHHHHh---
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT-----QANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSK---   78 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~-----~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~---   78 (238)
                      +.++++||||+||||+++|++|+++|++|++++|+     .++++++.+    ...++.++++|++|++++++++++   
T Consensus         4 ~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            4 SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            35689999999999999999999999999987665     444444433    345688999999999999888765   


Q ss_pred             -cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-cCCCCchhh
Q psy14567         79 -VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-ALEGHTIYS  156 (238)
Q Consensus        79 -~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~~~y~  156 (238)
                       +|++|++|||||+....++.+.+.++ |++++++|+.+++.++++++|+|++++ .|+||++||..+.. +.++...|+
T Consensus        84 ~~g~iD~lVnnAG~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~~~~~~~Y~  161 (324)
T 3u9l_A           84 EDGRIDVLIHNAGHMVFGPAEAFTPEQ-FAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGTPPYLAPYF  161 (324)
T ss_dssp             HHSCCSEEEECCCCCBCSCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCCSSCHHHH
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCCCCcchhHH
Confidence             48999999999998877888888888 999999999999999999999998877 79999999999875 456678999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR  194 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~  194 (238)
                      +||+++++++++++.|++++||+||+|+||+++|++..
T Consensus       162 asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~  199 (324)
T 3u9l_A          162 AAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNH  199 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC------
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchh
Confidence            99999999999999999999999999999999988753

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1.6e-38  Score=255.19  Aligned_cols=219  Identities=21%  Similarity=0.260  Sum_probs=184.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC-hHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT-QANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||+||||++++++|+++|++|++++|+ .+.++++.++    ..++.++++|++|++++++++++    +++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            44678999999999999999999999999999998 6666554333    34688999999999999888764    478


Q ss_pred             ccEEEEccCC-CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----CCceEEEEccccccc-cCCCCchh
Q psy14567         82 VDVLINNAAV-ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK----IQGSIVNVSSIAGKT-ALEGHTIY  155 (238)
Q Consensus        82 id~li~~ag~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~g~iv~isS~~~~~-~~~~~~~y  155 (238)
                      +|++|||||. ....++.+.+.++ |++.+++|+.+++.++++++|.|.+++    ..++||++||..+.. +.++...|
T Consensus        86 id~vi~~Ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y  164 (258)
T 3afn_B           86 IDVLINNAGGLVGRKPLPEIDDTF-YDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLY  164 (258)
T ss_dssp             CSEEEECCCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHH
T ss_pred             CCEEEECCCCcCCcCccccCCHHH-HHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHH
Confidence            9999999997 5556666777777 999999999999999999999997542    127999999998877 77888999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++|++++.+++.++.+++++||++|.|+||+++|++....  .++....+....|++++.+|+|+|+++.|++++.
T Consensus       165 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  239 (258)
T 3afn_B          165 GAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK--TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASHL  239 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC--CHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCHH
T ss_pred             HHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc--CHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999999987542  2222233445678899999999999999999864

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=6.7e-38  Score=254.35  Aligned_cols=220  Identities=21%  Similarity=0.275  Sum_probs=185.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC---CceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP---NVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.+..+++.++.+   ++.++++|++|++++++++++    ++++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            56789999999999999999999999999999999887766554432   588999999999999888765    47899


Q ss_pred             EEEEccCCCCC--CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCC-CCchhhHHHH
Q psy14567         84 VLINNAAVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALE-GHTIYSASKA  160 (238)
Q Consensus        84 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-~~~~y~~sK~  160 (238)
                      ++|||||....  .++.+.+.++ |++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.+ +...|+++|+
T Consensus        95 ~li~~Ag~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~Y~~sK~  172 (278)
T 2bgk_A           95 IMFGNVGVLSTTPYSILEAGNED-FKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTATKH  172 (278)
T ss_dssp             EEEECCCCCCSSCSSTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCTTSCHHHHHHHH
T ss_pred             EEEECCcccCCCCCChhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCCCCCCcchHHHHH
Confidence            99999997643  4566777787 999999999999999999999998766 68999999999888777 7889999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-CCccCCcc--cCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-PAKAGPML--AKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~--~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++.+++.++.+++++||+++.|+||++.|++....... ++....+.  ...|.+++.+|+|+|++++||+++.
T Consensus       173 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  247 (278)
T 2bgk_A          173 AVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDE  247 (278)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999987543221 11111111  1236788999999999999999863

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-38  Score=257.00  Aligned_cols=221  Identities=23%  Similarity=0.269  Sum_probs=181.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHh----c
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      .+.++++||||+||||++++++|+++|++|++++|+.++++++.+++      ..+.++.+|++|++++++++++    +
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            34578999999999999999999999999999999988776654432      2477889999999999888765    4


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CceEEEEcccccc--ccCCCCchhh
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI-QGSIVNVSSIAGK--TALEGHTIYS  156 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~--~~~~~~~~y~  156 (238)
                      +++|+||||||+....++.+.+.++ |+..+++|+.+++.+++.++|.+.+++. .++||++||..+.  .+.++...|+
T Consensus       110 g~iD~vi~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~  188 (279)
T 1xg5_A          110 SGVDICINNAGLARPDTLLSGSTSG-WKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYS  188 (279)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhH
Confidence            7899999999988777777888887 9999999999999999999999987652 3899999999887  5666778999


Q ss_pred             HHHHHHHHHHHHHHHHhC--CCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        157 ASKAALDSITRTMALELG--PYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~--~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      ++|++++.+++.++.+++  +.||++|.|+||+++|++.........  .......+..|+.+|+|+|++++|++++..
T Consensus       189 ~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          189 ATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP--EKAAATYEQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH--HHHHHHHC---CBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh--hHHhhhcccccCCCHHHHHHHHHHHhcCCc
Confidence            999999999999999998  889999999999999998532211111  111222345678999999999999998754

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=1.4e-38  Score=255.02  Aligned_cols=199  Identities=15%  Similarity=0.086  Sum_probs=174.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc----CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV----GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~id~li   86 (238)
                      -.++++||||++|||+++|++|+++|++|++++|+.+..+        ...+.+|++|+++++++++++    +++|++|
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li   92 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFV   92 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3478999999999999999999999999999999986532        245789999999998888654    8899999


Q ss_pred             EccCCCCCCC-CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         87 NNAAVARFDR-FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        87 ~~ag~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      ||||+....+ ..+.+.++ |++.+++|+.+++.++++++|.|++   +|+||++||..+..+.++...|+++|++++++
T Consensus        93 ~~Ag~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  168 (251)
T 3orf_A           93 CAAGGWSGGNASSDEFLKS-VKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGASAALNRTSGMIAYGATKAATHHI  168 (251)
T ss_dssp             ECCCCCCCBCTTSTTHHHH-HHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHH
T ss_pred             ECCccCCCCCcccccCHHH-HHHHHHHHhHHHHHHHHHHHHhhcc---CCEEEEEechhhccCCCCCchhHHHHHHHHHH
Confidence            9999876554 55666676 9999999999999999999999865   47999999999999999999999999999999


Q ss_pred             HHHHHHHhC--CCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        166 TRTMALELG--PYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       166 ~~~l~~~~~--~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +++++.+++  ++||++|+|+||+++|++......          ..+.+++.+|+|+|+.++||+++
T Consensus       169 ~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~~~dva~~i~~l~~~  226 (251)
T 3orf_A          169 IKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMS----------DANFDDWTPLSEVAEKLFEWSTN  226 (251)
T ss_dssp             HHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCT----------TSCGGGSBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhcccCCCcEEEEEecCcCcCcchhhhcc----------cccccccCCHHHHHHHHHHHhcC
Confidence            999999987  889999999999999998654321          23668899999999999999998

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1e-37  Score=256.85  Aligned_cols=219  Identities=22%  Similarity=0.201  Sum_probs=171.3

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeecCCH-HHHHHHHHh---
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDW-ARTRAAVSK---   78 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~-~~v~~~~~~---   78 (238)
                      ...+.++++||||++|||+++|++|+++|++|++++|+.++.++..++.     .++.++++|++++ ++++++++.   
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            3446778999999999999999999999999999999998766554432     3588999999997 888777764   


Q ss_pred             -cCCccEEEEccCCCCC------------------------------CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14567         79 -VGPVDVLINNAAVARF------------------------------DRFLDIDEENLIDSIFDVNIKAVINISQVVSKT  127 (238)
Q Consensus        79 -~g~id~li~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  127 (238)
                       ++++|+||||||+...                              .++.+.+.++ +++.+++|+.+++.++++++|.
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~  166 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYEL-AEECLKINYNGVKSVTEVLIPL  166 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHH-HHHHHHHHTHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhh-hhhheeeeeehHHHHHHHhhHh
Confidence             4899999999998742                              1334556676 9999999999999999999999


Q ss_pred             HHhccCCceEEEEccccccccC-------------------------------------------CCCchhhHHHHHHHH
Q psy14567        128 MIDHKIQGSIVNVSSIAGKTAL-------------------------------------------EGHTIYSASKAALDS  164 (238)
Q Consensus       128 ~~~~~~~g~iv~isS~~~~~~~-------------------------------------------~~~~~y~~sK~al~~  164 (238)
                      |.+++ .++||++||..+..+.                                           ++...|++||+++++
T Consensus       167 l~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~  245 (311)
T 3o26_A          167 LQLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNA  245 (311)
T ss_dssp             HTTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHH
T ss_pred             hccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHH
Confidence            98776 6899999999886543                                           355789999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      ++++++.++++  |+||+|+||+|+|+|......   .........++.+...|++.+....|++++..
T Consensus       246 ~~~~la~e~~~--i~v~~v~PG~v~T~~~~~~~~---~~~~~~a~~~~~~~~~~~~~~~g~~~~~s~~a  309 (311)
T 3o26_A          246 YTRVLANKIPK--FQVNCVCPGLVKTEMNYGIGN---YTAEEGAEHVVRIALFPDDGPSGFFYDCSELS  309 (311)
T ss_dssp             HHHHHHHHCTT--SEEEEECCCSBCSGGGTTCCS---BCHHHHHHHHHHHHTCCSSCCCSCEETC----
T ss_pred             HHHHHHhhcCC--ceEEEecCCceecCCcCCCCC---CCHHHHHHHHHHHHhCCCCCCCceEecccccc
Confidence            99999999975  999999999999999765321   11112223345555677888888888887643

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=1.2e-38  Score=253.93  Aligned_cols=202  Identities=12%  Similarity=0.057  Sum_probs=172.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc------CCccE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV------GPVDV   84 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~------g~id~   84 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.+..+      ....++++|++|+++++++++++      |++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~   79 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   79 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence            3567899999999999999999999999999999876532      13567789999999998887654      68999


Q ss_pred             EEEccCCCCCCCC-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         85 LINNAAVARFDRF-LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        85 li~~ag~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      +|||||+....++ .+.+.++ |++.+++|+.+++.++++++|.|.+   +|+||++||..+..+.++...|+++|++++
T Consensus        80 lv~~Ag~~~~~~~~~~~~~~~-~~~~~~~N~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  155 (241)
T 1dhr_A           80 ILCVAGGWAGGNAKSKSLFKN-CDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALDGTPGMIGYGMAKGAVH  155 (241)
T ss_dssp             EEECCCCCCCBCTTCTTHHHH-HHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             EEEcccccCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHhhcc---CCEEEEECCHHHccCCCCchHHHHHHHHHH
Confidence            9999998876666 5666676 9999999999999999999999864   479999999999988889999999999999


Q ss_pred             HHHHHHHHHhC--CCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELG--PYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~--~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++++.|++  ++||++|+|+||+++|++........          +..+..+|+|+|+.+.|++++.
T Consensus       156 ~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~----------~~~~~~~~~~vA~~v~~l~~~~  216 (241)
T 1dhr_A          156 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA----------DFSSWTPLEFLVETFHDWITGN  216 (241)
T ss_dssp             HHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS----------CGGGSEEHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcch----------hhccCCCHHHHHHHHHHHhcCC
Confidence            99999999999  89999999999999999865422111          1234567899999999999874

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=6.2e-39  Score=266.29  Aligned_cols=218  Identities=22%  Similarity=0.257  Sum_probs=174.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh---HHHHHhh-------CCCceEEEeecCCHHHHHHHHHhc--
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN---LDSLKQA-------FPNVQTVQVDLQDWARTRAAVSKV--   79 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~--   79 (238)
                      .++++||||+||||++++++|+++|++|++++|+..+   ..+..+.       ..++.++++|++|+++++++++++  
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            3578999999999999999999999998887765433   2222111       246889999999999999999876  


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      |++|+||||||+....++.+.+.++ |++++++|+.+++.++++++|.|.+++ .|+||++||..+..+.+....|++||
T Consensus        82 g~iD~lVnnAG~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~aSK  159 (327)
T 1jtv_A           82 GRVDVLVCNAGLGLLGPLEALGEDA-VASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYCASK  159 (327)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCcCCCCchhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCCCCChHHHHHH
Confidence            7899999999987767777788887 999999999999999999999998766 68999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCc---------c---CCccc--CCCCCCc-CCCCCcccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK---------A---GPMLA--KTPLGRF-AGKLKPKPW  224 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~---------~---~~~~~--~~~~~r~-~~~~~ia~~  224 (238)
                      +++++|+++++.|++++||+||+|+||+++|+|..........         .   .....  ..+++|+ .+|+|+|+.
T Consensus       160 ~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~  239 (327)
T 1jtv_A          160 FALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEV  239 (327)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHHHH
Confidence            9999999999999999999999999999999997543211100         0   00000  1134555 489999999


Q ss_pred             ccccccc
Q psy14567        225 NRWLLPS  231 (238)
Q Consensus       225 ~~~l~s~  231 (238)
                      ++|++++
T Consensus       240 i~~l~~~  246 (327)
T 1jtv_A          240 FLTALRA  246 (327)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHcC
Confidence            9999876

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.7e-38  Score=253.23  Aligned_cols=211  Identities=20%  Similarity=0.228  Sum_probs=182.1

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----c
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      ...+.++++||||+||||++++++|+++|++|++++|+.+..+++.++    ..++.++++|++|++++++++++    +
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            345667899999999999999999999999999999998877665443    34688999999999999888765    4


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      +++|++|||||+....++.+.+.++ |++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|+++|
T Consensus       107 g~iD~li~~Ag~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK  184 (272)
T 1yb1_A          107 GDVSILVNNAGVVYTSDLFATQDPQ-IEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSK  184 (272)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             CCCcEEEECCCcCCCcchhhCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCCCchhHHHHH
Confidence            8899999999988766677777777 999999999999999999999998776 68999999999888877788999999


Q ss_pred             HHHHHHHHHHHHHhC---CCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELG---PYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~---~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++++.++++++.++.   +.||++|+|+||+++|++...            ...+++++.+|+|+|+.+++++.+.
T Consensus       185 ~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~------------~~~~~~~~~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          185 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN------------PSTSLGPTLEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC------------THHHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc------------ccccccCCCCHHHHHHHHHHHHHcC
Confidence            999999999999996   679999999999999998531            1134678899999999999998763

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=1e-38  Score=256.46  Aligned_cols=202  Identities=19%  Similarity=0.224  Sum_probs=160.7

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEEccC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLINNAA   90 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~~ag   90 (238)
                      +++++||||+||||++++++|+++|++|++++|+.++.+.        . +++|++++++++++++++ +++|++|||||
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag   71 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA--------D-LSTAEGRKQAIADVLAKCSKGMDGLVLCAG   71 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC--------C-TTSHHHHHHHHHHHHTTCTTCCSEEEECCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc--------c-cccCCCCHHHHHHHHHHhCCCCCEEEECCC
Confidence            3578999999999999999999999999999998765321        1 679999999999999998 89999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc------------------------
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK------------------------  146 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------------------------  146 (238)
                      +....       .. |+..+++|+.+++.++++++|.|.+++ .|+||++||..+.                        
T Consensus        72 ~~~~~-------~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (257)
T 1fjh_A           72 LGPQT-------KV-LGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAI  142 (257)
T ss_dssp             CCTTC-------SS-HHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHH
T ss_pred             CCCCc-------cc-HHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccchhhhhhh
Confidence            76411       12 788999999999999999999998776 6899999999887                        


Q ss_pred             ----ccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCccc--CCCCCCcCCCCC
Q psy14567        147 ----TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLA--KTPLGRFAGKLK  220 (238)
Q Consensus       147 ----~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~--~~~~~r~~~~~~  220 (238)
                          .+.++...|++||++++.+++.++.+++++||++|+|+||+++|++....... ........  ..|++|+.+|+|
T Consensus       143 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d  221 (257)
T 1fjh_A          143 VEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD-PRYGESIAKFVPPMGRRAEPSE  221 (257)
T ss_dssp             HHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCSTTSCCCTHH
T ss_pred             hhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccc-hhHHHHHHhcccccCCCCCHHH
Confidence                33345679999999999999999999999999999999999999997643111 11111122  568899999999


Q ss_pred             cccccccccccc
Q psy14567        221 PKPWNRWLLPSV  232 (238)
Q Consensus       221 ia~~~~~l~s~~  232 (238)
                      +|++++||+++.
T Consensus       222 vA~~~~~l~~~~  233 (257)
T 1fjh_A          222 MASVIAFLMSPA  233 (257)
T ss_dssp             HHHHHHHHTSGG
T ss_pred             HHHHHHHHhCch
Confidence            999999999874

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-36  Score=243.23  Aligned_cols=204  Identities=23%  Similarity=0.225  Sum_probs=169.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCC--CEEEEecCChHhHHHHHhh-CCCceEEEeecCCHHHHHHHHHhc----C--C
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANLDSLKQA-FPNVQTVQVDLQDWARTRAAVSKV----G--P   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~----g--~   81 (238)
                      +.++++||||+||||++++++|+++|  ++|++++|+.++.+++.+. ..++.++++|++++++++++++++    |  +
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            35678999999999999999999999  9999999999887777554 346889999999999998887654    5  8


Q ss_pred             ccEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------cC----CceEEEEccccccccC-
Q psy14567         82 VDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH------KI----QGSIVNVSSIAGKTAL-  149 (238)
Q Consensus        82 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~----~g~iv~isS~~~~~~~-  149 (238)
                      +|++|||||... ..++.+.+.++ ++..+++|+.+++.++++++|.|.++      +.    .++||++||..+..+. 
T Consensus        82 id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~  160 (250)
T 1yo6_A           82 LSLLINNAGVLLSYGTNTEPNRAV-IAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCEEEECCCCCCCBCTTSCCCHHH-HHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             CcEEEECCcccCCCcccccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCc
Confidence            999999999886 66777778887 99999999999999999999999775      21    4799999999887765 


Q ss_pred             ------CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccc
Q psy14567        150 ------EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKP  223 (238)
Q Consensus       150 ------~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~  223 (238)
                            ++...|+++|+++++++++++.+++++||+++.|+||+++|++...                 .+..+|+|+|+
T Consensus       161 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~~~~~a~  223 (250)
T 1yo6_A          161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------------NAALTVEQSTA  223 (250)
T ss_dssp             CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------HHHHH
T ss_pred             ccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------CCCCCHHHHHH
Confidence                  5778999999999999999999999999999999999999998642                 24679999999


Q ss_pred             ccccccccc
Q psy14567        224 WNRWLLPSV  232 (238)
Q Consensus       224 ~~~~l~s~~  232 (238)
                      .+++++++.
T Consensus       224 ~~~~~~~~~  232 (250)
T 1yo6_A          224 ELISSFNKL  232 (250)
T ss_dssp             HHHHHHTTC
T ss_pred             HHHHHHhcc
Confidence            999999874

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=3e-37  Score=249.89  Aligned_cols=218  Identities=22%  Similarity=0.261  Sum_probs=183.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||+||||++++++|+++|++|++++| +.+..+++.++    ..++.++++|++|++++++++++    +++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4568899999999999999999999999999999 77666554332    45688899999999999887764    478


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-ccCCCCchhhHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-TALEGHTIYSASKA  160 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~~y~~sK~  160 (238)
                      +|++|||||.....++.+.+.++ |+..+++|+.+++.++++++|.+. +  +++||++||..+. .+.++...|+++|+
T Consensus       100 ~d~vi~~Ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~-~--~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  175 (274)
T 1ja9_A          100 LDFVMSNSGMEVWCDELEVTQEL-FDKVFNLNTRGQFFVAQQGLKHCR-R--GGRIILTSSIAAVMTGIPNHALYAGSKA  175 (274)
T ss_dssp             EEEEECCCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHEE-E--EEEEEEECCGGGTCCSCCSCHHHHHHHH
T ss_pred             CCEEEECCCCCCCcccccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHh-h--CCEEEEEcChHhccCCCCCCchHHHHHH
Confidence            99999999988766677778887 999999999999999999999987 3  3799999999987 67788899999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCC---C-------CC-CCccCCcccCCCCCCcCCCCCccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG---W-------SD-PAKAGPMLAKTPLGRFAGKLKPKPWNRWLL  229 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~---~-------~~-~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~  229 (238)
                      +++.+++.++.+++++||+++.++||++.|++....   .       .. ++....+....|++++.+|+|+|+++.+|+
T Consensus       176 a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  255 (274)
T 1ja9_A          176 AVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALC  255 (274)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHh
Confidence            999999999999999999999999999999986520   0       00 111222334568899999999999999999


Q ss_pred             ccc
Q psy14567        230 PSV  232 (238)
Q Consensus       230 s~~  232 (238)
                      ++.
T Consensus       256 ~~~  258 (274)
T 1ja9_A          256 QEE  258 (274)
T ss_dssp             SGG
T ss_pred             Ccc
Confidence            864

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-38  Score=248.56  Aligned_cols=200  Identities=13%  Similarity=0.044  Sum_probs=169.7

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc------CCccEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV------GPVDVL   85 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~------g~id~l   85 (238)
                      .++++||||+||||++++++|+++|++|++++|+.+..+      ....++++|++|+++++++++++      +++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            467899999999999999999999999999999876532      13567789999999998877654      689999


Q ss_pred             EEccCCCCCCCC-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         86 INNAAVARFDRF-LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        86 i~~ag~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      |||||+....++ .+.+.++ |++.+++|+.+++.++++++|.|.+   .|+||++||..+..+.++...|+++|+++++
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  152 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKN-ADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHH  152 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHH-HHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred             EECCcccCCCCCcccCCHHH-HHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEECchhhccCCCCcHHHHHHHHHHHH
Confidence            999998766666 5666676 9999999999999999999999864   4799999999999888899999999999999


Q ss_pred             HHHHHHHHhC--CCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccc-cc
Q psy14567        165 ITRTMALELG--PYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLL-PS  231 (238)
Q Consensus       165 l~~~l~~~~~--~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~-s~  231 (238)
                      ++++++.|++  ++||++|+|+||+++|++........          +..+..+|+|+|+.+++++ ++
T Consensus       153 ~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~----------~~~~~~~~~dvA~~i~~~l~s~  212 (236)
T 1ooe_A          153 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNA----------DHSSWTPLSFISEHLLKWTTET  212 (236)
T ss_dssp             HHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTC----------CGGGCBCHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCCc----------cccccCCHHHHHHHHHHHHcCC
Confidence            9999999998  99999999999999999865422111          1245668899999998444 54

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=4.9e-37  Score=272.90  Aligned_cols=207  Identities=22%  Similarity=0.271  Sum_probs=169.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh---------HhHHHHHhhCC--CceEEEeecCCHHHH----HHH
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ---------ANLDSLKQAFP--NVQTVQVDLQDWART----RAA   75 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~---------~~~~~~~~~~~--~~~~~~~D~~~~~~v----~~~   75 (238)
                      +.++++||||++|||+++|++|+++|++|++.+|+.         +.++++.++..  ... ..+|++|.+++    +++
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v~~~   85 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIVETA   85 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHHHHH
Confidence            457899999999999999999999999999998764         44444333221  111 23576666444    444


Q ss_pred             HHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchh
Q psy14567         76 VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIY  155 (238)
Q Consensus        76 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y  155 (238)
                      .+++|++|+||||||+....++.+++.++ |++++++|+.+++.++++++|+|++++ .|+||++||..+..+.++...|
T Consensus        86 ~~~~G~iDiLVnNAGi~~~~~~~~~~~~~-~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~~~~~~~Y  163 (604)
T 2et6_A           86 VKNFGTVHVIINNAGILRDASMKKMTEKD-YKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGNFGQANY  163 (604)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTBHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCCCchHH
Confidence            46679999999999998777888899888 999999999999999999999998876 7999999999999888999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++||+|+.+|+++++.|++++|||||+|+|| ++|+|..... .++          ..+..+|+|+|+.+.||+|+.
T Consensus       164 ~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~-~~~----------~~~~~~pe~vA~~v~~L~s~~  228 (604)
T 2et6_A          164 ASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIM-PPP----------MLEKLGPEKVAPLVLYLSSAE  228 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTS-CHH----------HHTTCSHHHHHHHHHHHTSSS
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccC-Chh----------hhccCCHHHHHHHHHHHhCCc
Confidence            9999999999999999999999999999998 6898865421 111          112359999999999999974

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=4.8e-38  Score=257.81  Aligned_cols=217  Identities=18%  Similarity=0.197  Sum_probs=168.5

Q ss_pred             CcCCCCCCCCC--CchHHHHHHHHhhCCCEEEEecCChH-----------hHHHHHhhCC--C----ceEEEee------
Q psy14567         11 RTNTKGGDYPK--PGIGRCIVEKLSQHEAIIIALSKTQA-----------NLDSLKQAFP--N----VQTVQVD------   65 (238)
Q Consensus        11 ~~~v~~itG~s--~gIG~~ia~~l~~~G~~V~~~~r~~~-----------~~~~~~~~~~--~----~~~~~~D------   65 (238)
                      +.++++||||+  +|||+++|++|+++|++|++++|+..           +++++ ++..  .    ...+.+|      
T Consensus         7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   85 (297)
T 1d7o_A            7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVFDNP   85 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTCCSG
T ss_pred             CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceeccch
Confidence            45688999999  99999999999999999999987632           11122 1111  0    2334443      


Q ss_pred             --cC----C--------HHHHHHHH----HhcCCccEEEEccCCCC--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q psy14567         66 --LQ----D--------WARTRAAV----SKVGPVDVLINNAAVAR--FDRFLDIDEENLIDSIFDVNIKAVINISQVVS  125 (238)
Q Consensus        66 --~~----~--------~~~v~~~~----~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  125 (238)
                        ++    |        ++++++++    +++|++|++|||||+..  ..++.+.+.++ |++.+++|+.+++.++++++
T Consensus        86 ~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~  164 (297)
T 1d7o_A           86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKG-YLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHG
T ss_pred             hhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHH-HHHHHHHhhhHHHHHHHHHH
Confidence              22    2        33455544    45689999999999753  45667778887 99999999999999999999


Q ss_pred             HHHHhccCCceEEEEccccccccCCCC-chhhHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCCceecCcccCCCCCCCcc
Q psy14567        126 KTMIDHKIQGSIVNVSSIAGKTALEGH-TIYSASKAALDSITRTMALELGP-YNIRVNSVQPTVVMTQMGRTGWSDPAKA  203 (238)
Q Consensus       126 ~~~~~~~~~g~iv~isS~~~~~~~~~~-~~y~~sK~al~~l~~~l~~~~~~-~~i~v~~i~PG~v~t~~~~~~~~~~~~~  203 (238)
                      |.|.+   +|+||++||..+..+.++. ..|++||+++++|+++++.|+++ +||+||+|+||+++|+|.......++..
T Consensus       165 ~~m~~---~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~  241 (297)
T 1d7o_A          165 PIMNP---GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMI  241 (297)
T ss_dssp             GGEEE---EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHH
T ss_pred             HHhcc---CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHH
Confidence            99964   3799999999998888877 69999999999999999999985 7999999999999999965421111222


Q ss_pred             CCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        204 GPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       204 ~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .......|++|+++|+|+|+.++||+|+.
T Consensus       242 ~~~~~~~p~~r~~~pedvA~~v~~l~s~~  270 (297)
T 1d7o_A          242 EYSYNNAPIQKTLTADEVGNAAAFLVSPL  270 (297)
T ss_dssp             HHHHHHSSSCCCBCHHHHHHHHHHHTSGG
T ss_pred             HHhhccCCCCCCCCHHHHHHHHHHHhCcc
Confidence            22334578999999999999999999873

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=8.6e-38  Score=258.76  Aligned_cols=218  Identities=19%  Similarity=0.176  Sum_probs=139.8

Q ss_pred             CcCCCCCCCC--CCchHHHHHHHHhhCCCEEEEecCCh-----------HhHHH-----------HHhhCC-------Cc
Q psy14567         11 RTNTKGGDYP--KPGIGRCIVEKLSQHEAIIIALSKTQ-----------ANLDS-----------LKQAFP-------NV   59 (238)
Q Consensus        11 ~~~v~~itG~--s~gIG~~ia~~l~~~G~~V~~~~r~~-----------~~~~~-----------~~~~~~-------~~   59 (238)
                      +.++++||||  ++|||+++|++|+++|++|++++|++           +.+++           +.++..       ..
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFD   87 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCS
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccc
Confidence            4578899999  89999999999999999999998753           12221           111110       02


Q ss_pred             eEEEee------------cCC--------HHHHHHHH----HhcCCccEEEEccCCCC--CCCCCCCChHHHHHHHHHHH
Q psy14567         60 QTVQVD------------LQD--------WARTRAAV----SKVGPVDVLINNAAVAR--FDRFLDIDEENLIDSIFDVN  113 (238)
Q Consensus        60 ~~~~~D------------~~~--------~~~v~~~~----~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~n  113 (238)
                      .++.+|            +++        ++++++++    +++|++|++|||||+..  ..++.+.+.++ |++++++|
T Consensus        88 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~-~~~~~~vN  166 (319)
T 2ptg_A           88 KIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKG-YLAAVSSS  166 (319)
T ss_dssp             EEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHH-HHHHHHHH
T ss_pred             ccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHH-HHHHHhHh
Confidence            444444            333        23455544    45689999999999763  45677788888 99999999


Q ss_pred             HHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCC-chhhHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCCceecC
Q psy14567        114 IKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGH-TIYSASKAALDSITRTMALELGP-YNIRVNSVQPTVVMTQ  191 (238)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~-~~y~~sK~al~~l~~~l~~~~~~-~~i~v~~i~PG~v~t~  191 (238)
                      +.+++.++++++|+|.+   +|+||++||..+..+.++. ..|++||+++++|+++++.|+++ +||+||+|+||+++|+
T Consensus       167 ~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~  243 (319)
T 2ptg_A          167 SYSFVSLLQHFLPLMKE---GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSR  243 (319)
T ss_dssp             THHHHHHHHHHGGGEEE---EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC--
T ss_pred             hHHHHHHHHHHHHHHhc---CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccCh
Confidence            99999999999999964   3799999999998887777 69999999999999999999985 8999999999999999


Q ss_pred             cccCCCCC--C----CccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        192 MGRTGWSD--P----AKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       192 ~~~~~~~~--~----~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |.......  +    +..+.+....|++|+++|+|+|++++||+|+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~  290 (319)
T 2ptg_A          244 AASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPL  290 (319)
T ss_dssp             -----------------------------CCCHHHHHHHHHHHTSGG
T ss_pred             hhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcc
Confidence            87543211  1    11122334579999999999999999999973

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=5.2e-37  Score=253.77  Aligned_cols=209  Identities=21%  Similarity=0.253  Sum_probs=171.9

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEe---------cCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHH--
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIAL---------SKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVS--   77 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~---------~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~--   77 (238)
                      .+.++++||||++|||++++++|+++|++|++.         +|+.++.+++.+++. ......+|+++.++++++++  
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence            356789999999999999999999999999996         456666555433321 11124589999887766654  


Q ss_pred             --hcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchh
Q psy14567         78 --KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIY  155 (238)
Q Consensus        78 --~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y  155 (238)
                        +++++|+||||||+....++.+.+.++ |+..+++|+.+++.++++++|.|++++ .|+||++||..+..+.++...|
T Consensus        87 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~~~~~~~~Y  164 (319)
T 1gz6_A           87 LDTFGRIDVVVNNAGILRDRSFSRISDED-WDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQANY  164 (319)
T ss_dssp             HHHTSCCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCCCCHHH
Confidence              468999999999988766677778887 999999999999999999999998876 6899999999888888889999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++||+++++|+++++.+++++||++|+|+||++ |++..... .+          ...+..+|+|+|+.++||+++.
T Consensus       165 ~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~-~~----------~~~~~~~p~dvA~~~~~l~s~~  229 (319)
T 1gz6_A          165 SAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVM-PE----------DLVEALKPEYVAPLVLWLCHES  229 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGS-CH----------HHHHHSCGGGTHHHHHHHTSTT
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccC-Ch----------hhhccCCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999998 87754321 10          1123569999999999999873

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-37  Score=248.93  Aligned_cols=213  Identities=23%  Similarity=0.222  Sum_probs=172.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.++.+++.++.      .++.++++|++|++++++++++    +|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            3467899999999999999999999999999999988766544332      2477899999999999888765    48


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCceEEEEccccccccCCCCchhhHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK--IQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      ++|++|||||...        .++ |++.+++|+.+++.+++.++|.|.+++  ..|+||++||..+..+.++...|++|
T Consensus        86 ~id~lv~~Ag~~~--------~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  156 (267)
T 2gdz_A           86 RLDILVNNAGVNN--------EKN-WEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCAS  156 (267)
T ss_dssp             CCCEEEECCCCCC--------SSS-HHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCEEEECCCCCC--------hhh-HHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHH
Confidence            9999999999753        233 888999999999999999999997753  25899999999998888889999999


Q ss_pred             HHHHHHHHHHH--HHHhCCCCeEEEEEeCCceecCcccCCCCCCCcc------CCcccCCCCCCcCCCCCcccccccccc
Q psy14567        159 KAALDSITRTM--ALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKA------GPMLAKTPLGRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       159 K~al~~l~~~l--~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~------~~~~~~~~~~r~~~~~~ia~~~~~l~s  230 (238)
                      |++++++++++  +.+++++||++|+|+||+++|++...........      .......+..++.+|+|+|++++||++
T Consensus       157 K~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s  236 (267)
T 2gdz_A          157 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIE  236 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhc
Confidence            99999999995  6889999999999999999999864321110000      000011123456799999999999998


Q ss_pred             cc
Q psy14567        231 SV  232 (238)
Q Consensus       231 ~~  232 (238)
                      +.
T Consensus       237 ~~  238 (267)
T 2gdz_A          237 DD  238 (267)
T ss_dssp             CT
T ss_pred             Cc
Confidence            74

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=4.8e-38  Score=259.83  Aligned_cols=218  Identities=21%  Similarity=0.208  Sum_probs=169.6

Q ss_pred             CcCCCCCCCC--CCchHHHHHHHHhhCCCEEEEecCChH-----------hHHHHHhhC-CC----ceEEEee-------
Q psy14567         11 RTNTKGGDYP--KPGIGRCIVEKLSQHEAIIIALSKTQA-----------NLDSLKQAF-PN----VQTVQVD-------   65 (238)
Q Consensus        11 ~~~v~~itG~--s~gIG~~ia~~l~~~G~~V~~~~r~~~-----------~~~~~~~~~-~~----~~~~~~D-------   65 (238)
                      +.++++||||  ++|||+++|++|+++|++|++++|++.           .++++.+.. +.    ..++.+|       
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~   87 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPE   87 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTT
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccc
Confidence            4578999999  899999999999999999999987641           122232110 11    2444444       


Q ss_pred             -----cCC--------HHHHHHHH----HhcCCccEEEEccCCCC--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14567         66 -----LQD--------WARTRAAV----SKVGPVDVLINNAAVAR--FDRFLDIDEENLIDSIFDVNIKAVINISQVVSK  126 (238)
Q Consensus        66 -----~~~--------~~~v~~~~----~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  126 (238)
                           ++|        ++++++++    +++|++|++|||||+..  ..++.+.+.++ |++.+++|+.+++.++++++|
T Consensus        88 ~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~  166 (315)
T 2o2s_A           88 DVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKG-YLAASSNSAYSFVSLLQHFGP  166 (315)
T ss_dssp             SSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHST
T ss_pred             hhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHH-HHHHHhhhhHHHHHHHHHHHH
Confidence                 332        34555554    45689999999999763  45677788888 999999999999999999999


Q ss_pred             HHHhccCCceEEEEccccccccCCCC-chhhHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCCceecCcccCCCCCC--Cc
Q psy14567        127 TMIDHKIQGSIVNVSSIAGKTALEGH-TIYSASKAALDSITRTMALELGP-YNIRVNSVQPTVVMTQMGRTGWSDP--AK  202 (238)
Q Consensus       127 ~~~~~~~~g~iv~isS~~~~~~~~~~-~~y~~sK~al~~l~~~l~~~~~~-~~i~v~~i~PG~v~t~~~~~~~~~~--~~  202 (238)
                      .|.+   +|+||++||..+..+.++. ..|++||+++++|+++++.|+++ +||+||+|+||+++|+|........  ++
T Consensus       167 ~m~~---~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~  243 (315)
T 2o2s_A          167 IMNE---GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSF  243 (315)
T ss_dssp             TEEE---EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCH
T ss_pred             HHhc---CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchh
Confidence            9964   3799999999998887777 58999999999999999999985 8999999999999999865422111  11


Q ss_pred             c----CCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        203 A----GPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       203 ~----~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .    ..+....|++|+++|+|+|++++||+|+.
T Consensus       244 ~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~  277 (315)
T 2o2s_A          244 IDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPL  277 (315)
T ss_dssp             HHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCch
Confidence            0    11224579999999999999999999973

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-37  Score=242.89  Aligned_cols=209  Identities=21%  Similarity=0.266  Sum_probs=177.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh---cCCccEEEEc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK---VGPVDVLINN   88 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~---~g~id~li~~   88 (238)
                      .++++||||+||||++++++|+++|++|++++|+.+        ...+.++++|++|++++++++++   ++++|++|||
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~   73 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------GEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSA   73 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------SSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc--------ccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEc
Confidence            357899999999999999999999999999999875        12468899999999999888765   4789999999


Q ss_pred             cCCCCCCCCCCCChH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCceEEEEccccccccCCCCchhhHHH
Q psy14567         89 AAVARFDRFLDIDEE----NLIDSIFDVNIKAVINISQVVSKTMIDHK-----IQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        89 ag~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      ||.....++.+.+.+    + |++.+++|+.+++.+++++.|.+.+++     ..++||++||..+..+.++...|+++|
T Consensus        74 ag~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  152 (242)
T 1uay_A           74 AGVGLAEKILGKEGPHGLES-FRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASK  152 (242)
T ss_dssp             CCCCCCCCSBCSSSBCCHHH-HHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             ccccCcccccccccccchHH-HHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhHHH
Confidence            998766555554433    6 999999999999999999999998653     135999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCC-CCcCCCCCccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPL-GRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++++.+++.++.+++++||++|.|+||+++|++....  .+..........|+ +|+.+|+|+|++++|++++
T Consensus       153 ~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  223 (242)
T 1uay_A          153 GGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL--PEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN  223 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS--CHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc--chhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999987542  12222233345677 8999999999999999987

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=1.2e-36  Score=244.09  Aligned_cols=209  Identities=22%  Similarity=0.231  Sum_probs=169.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCE-EEEecCCh--HhHHHHHhhCC--CceEEEeecCCH-HHHHHHHHh----cC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAI-IIALSKTQ--ANLDSLKQAFP--NVQTVQVDLQDW-ARTRAAVSK----VG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~-V~~~~r~~--~~~~~~~~~~~--~~~~~~~D~~~~-~~v~~~~~~----~g   80 (238)
                      +.++++||||+||||++++++|+++|++ |++++|+.  +.++++.+..+  ++.++++|++|+ +++++++++    ++
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            3467899999999999999999999996 99999986  45666666543  578899999998 888777754    48


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CceEEEEccccccccCCCCchhhHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI--QGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      ++|++|||||+..        .++ |++.+++|+.+++.++++++|.|.+++.  .|+||++||..+..+.++...|++|
T Consensus        84 ~id~lv~~Ag~~~--------~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  154 (254)
T 1sby_A           84 TVDILINGAGILD--------DHQ-IERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSAS  154 (254)
T ss_dssp             CCCEEEECCCCCC--------TTC-HHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHH
T ss_pred             CCCEEEECCccCC--------HHH-HhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHH
Confidence            9999999999742        344 8899999999999999999999976531  4799999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC---CCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD---PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      |+++++++++++.+++++||++|+|+||+++|++.......   .+.........|   +.+|+|+|+.+++++++
T Consensus       155 K~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~dvA~~i~~~~~~  227 (254)
T 1sby_A          155 KAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHP---TQTSEQCGQNFVKAIEA  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSC---CEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCC---CCCHHHHHHHHHHHHHc
Confidence            99999999999999988899999999999999986542110   111111222233   34899999999999864

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=2.7e-36  Score=269.00  Aligned_cols=209  Identities=20%  Similarity=0.196  Sum_probs=163.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC---------ChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHh-
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK---------TQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSK-   78 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~-   78 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|         +.+.++++.++.. ......+|+++.+++++++++ 
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~   96 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETA   96 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC--
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHH
Confidence            36678999999999999999999999999999987         5555554433321 111234899998888777754 


Q ss_pred             ---cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchh
Q psy14567         79 ---VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIY  155 (238)
Q Consensus        79 ---~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y  155 (238)
                         +|++|+||||||+....++.+.+.++ |+.++++|+.+++.++++++|+|++++ .|+||++||..+..+.++...|
T Consensus        97 ~~~~g~iDiLVnnAGi~~~~~~~~~~~~~-~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~~~~~~~~Y  174 (613)
T 3oml_A           97 IKAFGRVDILVNNAGILRDRSLVKTSEQD-WNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYGNFGQVNY  174 (613)
T ss_dssp             --------CEECCCCCCCCCCSTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHHCCTTCHHH
T ss_pred             HHHCCCCcEEEECCCCCCCCCcccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCCCChHH
Confidence               48999999999998888888889888 999999999999999999999999877 7999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++||+|+.+|+++++.|++++||+||+|+||++ |+|...... +          ++.+..+|+|+|+.++||+|+.
T Consensus       175 ~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~-~----------~~~~~~~pedvA~~v~~L~s~~  239 (613)
T 3oml_A          175 TAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILP-D----------ILFNELKPKLIAPVVAYLCHES  239 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCC-H----------HHHTTCCGGGTHHHHHHTTSTT
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccc-h----------hhhhcCCHHHHHHHHHHhcCCC
Confidence            999999999999999999999999999999975 666543221 1          1234459999999999999985

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=1.1e-36  Score=258.12  Aligned_cols=218  Identities=11%  Similarity=-0.005  Sum_probs=175.2

Q ss_pred             CCcCCCCCCCCCCchHHH--HHHHHhhCCCEEEEecCChH---------------hHHHH-HhhCCCceEEEeecCCHHH
Q psy14567         10 DRTNTKGGDYPKPGIGRC--IVEKLSQHEAIIIALSKTQA---------------NLDSL-KQAFPNVQTVQVDLQDWAR   71 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~--ia~~l~~~G~~V~~~~r~~~---------------~~~~~-~~~~~~~~~~~~D~~~~~~   71 (238)
                      ...++++||||++|||++  +++.|+++|++|++++|+..               .+++. .+....+..+++|++++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            467889999999999999  99999999999999988642               23333 2333468889999999999


Q ss_pred             HHHHHHh----cCCccEEEEccCCC-------------CCCCC---------------------CCCChHHHHHHHHHHH
Q psy14567         72 TRAAVSK----VGPVDVLINNAAVA-------------RFDRF---------------------LDIDEENLIDSIFDVN  113 (238)
Q Consensus        72 v~~~~~~----~g~id~li~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~~n  113 (238)
                      +++++++    +|++|++|||||..             ...++                     .+.+.++ |++.+++|
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~-~~~~~~vn  216 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEE-IEETRKVM  216 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHH-HHHHHHHh
Confidence            9887755    48999999999974             22233                     2346677 99999999


Q ss_pred             HHHHH-HHHHHHHHHHHhccCCceEEEEccccccccCCCC--chhhHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCCcee
Q psy14567        114 IKAVI-NISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGH--TIYSASKAALDSITRTMALELGP-YNIRVNSVQPTVVM  189 (238)
Q Consensus       114 ~~~~~-~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~--~~y~~sK~al~~l~~~l~~~~~~-~~i~v~~i~PG~v~  189 (238)
                      ..+.+ .+++++.+.+..++ +|+||++||+.+..+.+.+  ..|++||+|+++|+++|+.|+++ +|||||+|+||+++
T Consensus       217 ~~~~~~~~~~~l~~~~~~~~-gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~  295 (418)
T 4eue_A          217 GGEDWQEWCEELLYEDCFSD-KATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALV  295 (418)
T ss_dssp             SSHHHHHHHHHHHHTTCEEE-EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred             hHHHHHHHHHHHHHHhhhcC-CcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCc
Confidence            99887 77777776544444 5899999999999888887  99999999999999999999999 99999999999999


Q ss_pred             cCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        190 TQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       190 t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      |++.......+.....  ...+++|.++|+++++.+.||+++
T Consensus       296 T~~s~~ip~~p~y~~~--~~~~mk~~G~~E~v~e~~~~L~sd  335 (418)
T 4eue_A          296 TKASAYIPTFPLYAAI--LYKVMKEKNIHENCIMQIERMFSE  335 (418)
T ss_dssp             CHHHHTSTTHHHHHHH--HHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred             ChhhhcCCCCcHHHHH--HHHHHhhcCChHHHHHHHHHHhhc
Confidence            9997654322211111  122788999999999999999987

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=4.9e-35  Score=236.18  Aligned_cols=205  Identities=20%  Similarity=0.274  Sum_probs=174.3

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCC---CEEEEecCChHhH---HHHHhhCCCceEEEeecCCHHHHHHHHHhc---
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHE---AIIIALSKTQANL---DSLKQAFPNVQTVQVDLQDWARTRAAVSKV---   79 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~---   79 (238)
                      ..++++++||||+||||++++++|+++|   ++|++++|+.+..   +++.+...++.++.+|++++++++++++++   
T Consensus        18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            3466789999999999999999999999   9999999997643   344444567899999999999998887654   


Q ss_pred             -C--CccEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------cC----CceEEEEccccc
Q psy14567         80 -G--PVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH------KI----QGSIVNVSSIAG  145 (238)
Q Consensus        80 -g--~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~----~g~iv~isS~~~  145 (238)
                       +  ++|++|||||+.. ..++.+.+.++ ++..+++|+.+++.++++++|.|.++      +.    .++||++||..+
T Consensus        98 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~  176 (267)
T 1sny_A           98 TKDQGLNVLFNNAGIAPKSARITAVRSQE-LLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG  176 (267)
T ss_dssp             HGGGCCSEEEECCCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred             cCCCCccEEEECCCcCCCccccccCCHHH-HHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence             5  7999999999876 56667777787 99999999999999999999999876      21    479999999988


Q ss_pred             cccCC---CCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcc
Q psy14567        146 KTALE---GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPK  222 (238)
Q Consensus       146 ~~~~~---~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia  222 (238)
                      ..+.+   +...|+++|++++.+++.++.+++++||++++|+||+++|+|...                 .+..+|+++|
T Consensus       177 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~~~~~a  239 (267)
T 1sny_A          177 SIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------SAPLDVPTST  239 (267)
T ss_dssp             CSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------TCSBCHHHHH
T ss_pred             cccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------CCCCCHHHHH
Confidence            76643   678999999999999999999999999999999999999998632                 1346889999


Q ss_pred             ccccccccc
Q psy14567        223 PWNRWLLPS  231 (238)
Q Consensus       223 ~~~~~l~s~  231 (238)
                      +.+++++++
T Consensus       240 ~~~~~~~~~  248 (267)
T 1sny_A          240 GQIVQTISK  248 (267)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999998875

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=1.4e-35  Score=230.67  Aligned_cols=201  Identities=15%  Similarity=0.133  Sum_probs=172.7

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      +++||||+||||++++++|+++  +|++++|+.++.+++.++.+. .++++|++|++++++++++++++|++|||||...
T Consensus         2 ~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~~   78 (207)
T 2yut_A            2 RVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGKAG   78 (207)
T ss_dssp             EEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcCC
Confidence            5789999999999999999988  999999999888877665544 7889999999999999987888999999999887


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHHh
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL  173 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~  173 (238)
                      ..++.+.+.++ |+..+++|+.+++.+++++    .+++ .++||++||..+..+.++...|+++|++++.+++.++.++
T Consensus        79 ~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~  152 (207)
T 2yut_A           79 RASVREAGRDL-VEEMLAAHLLTAAFVLKHA----RFQK-GARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKEL  152 (207)
T ss_dssp             CBCSCC---CH-HHHHHHHHHHHHHHHHHHC----CEEE-EEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCChhhCCHHH-HHHHHHHHhHHHHHHHHHH----HhcC-CcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence            77777777777 9999999999999999998    2333 5899999999988888889999999999999999999999


Q ss_pred             CCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccccc
Q psy14567        174 GPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLN  235 (238)
Q Consensus       174 ~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~~  235 (238)
                      +++||+++.|+||++.|++...            ...|.+++.+|+|+|+++++++++....
T Consensus       153 ~~~gi~v~~v~pg~v~t~~~~~------------~~~~~~~~~~~~dva~~~~~~~~~~~~~  202 (207)
T 2yut_A          153 LREGVHLVLVRLPAVATGLWAP------------LGGPPKGALSPEEAARKVLEGLFREPVP  202 (207)
T ss_dssp             HTTTCEEEEECCCCBCSGGGGG------------GTSCCTTCBCHHHHHHHHHHHHC--CCC
T ss_pred             hhhCCEEEEEecCcccCCCccc------------cCCCCCCCCCHHHHHHHHHHHHhCCCCc
Confidence            9999999999999999998432            1135688999999999999999876544

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=5.7e-35  Score=238.28  Aligned_cols=207  Identities=20%  Similarity=0.176  Sum_probs=172.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||+||||++++++|+++|++|++++|+.+.++++.++.     .++.++.+|++|++++++++++    +|+
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4568899999999999999999999999999999998877654432     2578899999999999888765    489


Q ss_pred             ccEEEEc-cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         82 VDVLINN-AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        82 id~li~~-ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      +|++||| +|... .+..+.+.++ ++.++++|+.+++.++++++|.|.++  .|+||++||..+..+.++...|++||+
T Consensus       107 iD~li~naag~~~-~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~  182 (286)
T 1xu9_A          107 LDMLILNHITNTS-LNLFHDDIHH-VRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKVAYPMVAAYSASKF  182 (286)
T ss_dssp             CSEEEECCCCCCC-CCCCCSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEECCccCCC-CccccCCHHH-HHHHHHHHhhHHHHHHHHHHHHHHHC--CCEEEEECCcccccCCCCccHHHHHHH
Confidence            9999999 56553 3455567777 99999999999999999999998764  489999999999988899999999999


Q ss_pred             HHHHHHHHHHHHh--CCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        161 ALDSITRTMALEL--GPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       161 al~~l~~~l~~~~--~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++++++++++.|+  ...||+++.|+||+++|++.......          .......+|+|+|+.++..+..
T Consensus       183 a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~~vA~~i~~~~~~  245 (286)
T 1xu9_A          183 ALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG----------IVHMQAAPKEECALEIIKGGAL  245 (286)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG----------GGGGGCBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhccc----------cccCCCCCHHHHHHHHHHHHhc
Confidence            9999999999999  67899999999999999986432110          0112356899999998877654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=4.5e-35  Score=236.97  Aligned_cols=200  Identities=21%  Similarity=0.165  Sum_probs=167.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhh-CCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHhc----CC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQ-HEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV----GP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~----g~   81 (238)
                      +.++++||||+||||++++++|++ .|++|++++|+.+..+++.++    ..++.++.+|++|+++++++++++    ++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            467899999999999999999999 999999999998776554333    356889999999999998887654    78


Q ss_pred             ccEEEEccCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc------------
Q psy14567         82 VDVLINNAAVARFDRFLDID-EENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA------------  148 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------  148 (238)
                      +|+||||||...... .+.+ .++ ++..+++|+.+++.++++++|.+.+   .|+||++||..+..+            
T Consensus        83 id~li~~Ag~~~~~~-~~~~~~~~-~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~~~~~~~  157 (276)
T 1wma_A           83 LDVLVNNAGIAFKVA-DPTPFHIQ-AEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQKF  157 (276)
T ss_dssp             EEEEEECCCCCCCTT-CCSCHHHH-HHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred             CCEEEECCcccccCC-CccccHHH-HHhhhheeeeeHHHHHHHHHHhhCC---CCEEEEECChhhhcccccCChhHHhhc
Confidence            999999999875433 3334 355 9999999999999999999998864   379999999876532            


Q ss_pred             -----------------------------CCCCchhhHHHHHHHHHHHHHHHHhCC----CCeEEEEEeCCceecCcccC
Q psy14567        149 -----------------------------LEGHTIYSASKAALDSITRTMALELGP----YNIRVNSVQPTVVMTQMGRT  195 (238)
Q Consensus       149 -----------------------------~~~~~~y~~sK~al~~l~~~l~~~~~~----~~i~v~~i~PG~v~t~~~~~  195 (238)
                                                   ..+...|++||++++.+++.++.++++    +||++|+|+||+++|+|...
T Consensus       158 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~  237 (276)
T 1wma_A          158 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP  237 (276)
T ss_dssp             HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred             cccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc
Confidence                                         012379999999999999999999987    79999999999999998642


Q ss_pred             CCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        196 GWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                                       .++.+|+|+|+.++||+++.
T Consensus       238 -----------------~~~~~~~~~a~~~~~l~~~~  257 (276)
T 1wma_A          238 -----------------KATKSPEEGAETPVYLALLP  257 (276)
T ss_dssp             -----------------TCSBCHHHHTHHHHHHHSCC
T ss_pred             -----------------cccCChhHhhhhHhhhhcCc
Confidence                             24689999999999999854

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=2.7e-34  Score=222.68  Aligned_cols=188  Identities=17%  Similarity=0.196  Sum_probs=166.3

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      .++||||+||||++++++|+ +|++|++++|+.+             .+++|+++++++++++++++++|++|||||...
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~~   70 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------DVTVDITNIDSIKKMYEQVGKVDAIVSATGSAT   70 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------SEECCTTCHHHHHHHHHHHCCEEEEEECCCCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------ceeeecCCHHHHHHHHHHhCCCCEEEECCCCCC
Confidence            37899999999999999999 9999999999874             478999999999999999999999999999877


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHHh
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL  173 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~  173 (238)
                      ..++.+.+.++ |++.+++|+.+++.+++++.|.+.+   +++||++||..+..+.++...|+++|++++.+++.++.++
T Consensus        71 ~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~e~  146 (202)
T 3d7l_A           71 FSPLTELTPEK-NAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM  146 (202)
T ss_dssp             CCCGGGCCHHH-HHHHHHTTTHHHHHHHHTTGGGEEE---EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHTTSC
T ss_pred             CCChhhCCHHH-HHHHHhhccHHHHHHHHHHHHHhcc---CCEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHHHHc
Confidence            66777778887 9999999999999999999998854   3799999999988888889999999999999999999999


Q ss_pred             CCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        174 GPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       174 ~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                       ++||+++.|+||++.|++...           ....+.+++.+++|+|+++++++++
T Consensus       147 -~~gi~v~~v~pg~v~~~~~~~-----------~~~~~~~~~~~~~dva~~~~~~~~~  192 (202)
T 3d7l_A          147 -PRGIRINTVSPNVLEESWDKL-----------EPFFEGFLPVPAAKVARAFEKSVFG  192 (202)
T ss_dssp             -STTCEEEEEEECCBGGGHHHH-----------GGGSTTCCCBCHHHHHHHHHHHHHS
T ss_pred             -cCCeEEEEEecCccCCchhhh-----------hhhccccCCCCHHHHHHHHHHhhhc
Confidence             789999999999999997531           1123556788999999999888754

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.6e-33  Score=260.64  Aligned_cols=213  Identities=17%  Similarity=0.131  Sum_probs=174.1

Q ss_pred             CCcCCCCCCCCCCc-hHHHHHHHHhhCCCEEEEe-cCChHhHHHHHhhC--------CCceEEEeecCCHHHHHHHHHh-
Q psy14567         10 DRTNTKGGDYPKPG-IGRCIVEKLSQHEAIIIAL-SKTQANLDSLKQAF--------PNVQTVQVDLQDWARTRAAVSK-   78 (238)
Q Consensus        10 ~~~~v~~itG~s~g-IG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~-   78 (238)
                      .+.++++||||++| ||+++|++|+++|++|+++ +|+.+.++++.++.        ..+.++++|++|++++++++++ 
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I  553 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  553 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence            35678999999998 9999999999999999988 67765544333222        2478899999999999888864 


Q ss_pred             --------cC-CccEEEEccCCCCCC-CCCCCC--hHHHHHHHHHHHHHHHHHHHHHH--HHHHHhccCCceEEEEcccc
Q psy14567         79 --------VG-PVDVLINNAAVARFD-RFLDID--EENLIDSIFDVNIKAVINISQVV--SKTMIDHKIQGSIVNVSSIA  144 (238)
Q Consensus        79 --------~g-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~--~~~~~~~~~~g~iv~isS~~  144 (238)
                              +| ++|+||||||+.... ++.+.+  .++ |++++++|+.+++.+++.+  .|.|.+++ .|+||++||..
T Consensus       554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed-~~rv~~VNL~G~~~Ltqaa~~lp~M~krg-gGrIVnISSiA  631 (1688)
T 2pff_A          554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEF-AHRIMLTNILRMMGCVKKQKSARGIETRP-AQVILPMSPNH  631 (1688)
T ss_dssp             HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHH-HHHHTTHHHHHHHHHHHHHHHHHTCTTSC-EEECCCCCSCT
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHH-HHHHHHHHHHHHHHHHHHHHhChHHHhCC-CCEEEEEEChH
Confidence                    55 899999999988766 677777  676 9999999999999999998  78887654 58999999998


Q ss_pred             ccccCCCCchhhHHHHHHHHH-HHHHHHHhCCCCeEEEEEeCCcee-cCcccCCCCCCCccCCcccCCCCCCcCCCCCcc
Q psy14567        145 GKTALEGHTIYSASKAALDSI-TRTMALELGPYNIRVNSVQPTVVM-TQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPK  222 (238)
Q Consensus       145 ~~~~~~~~~~y~~sK~al~~l-~~~l~~~~~~~~i~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia  222 (238)
                      +..+  +...|++||+|+++| .+.++.++++. |+||+|+||+++ |+|....    +.........|+ |..+|+|+|
T Consensus       632 G~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~----e~~~~~l~~ipl-R~~sPEEVA  703 (1688)
T 2pff_A          632 GTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN----NIIAEGIEKMGV-RTFSQKEMA  703 (1688)
T ss_dssp             TTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTT----TTCSTTTSSSSC-CCCCCCTTH
T ss_pred             hccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCc----hHHHHHHHhCCC-CCCCHHHHH
Confidence            8776  567999999999999 78888889887 999999999999 7876431    122223344565 566999999


Q ss_pred             cccccccccc
Q psy14567        223 PWNRWLLPSV  232 (238)
Q Consensus       223 ~~~~~l~s~~  232 (238)
                      +.++||+|+.
T Consensus       704 ~aIlFLaSd~  713 (1688)
T 2pff_A          704 FNLLGLLTPE  713 (1688)
T ss_dssp             HHHHHHTSTT
T ss_pred             HHHHHHhCCC
Confidence            9999999875

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.98  E-value=1.2e-32  Score=263.22  Aligned_cols=213  Identities=17%  Similarity=0.115  Sum_probs=171.8

Q ss_pred             CCcCCCCCCCCCCc-hHHHHHHHHhhCCCEEEEe-cCChHhHHHHH----hh----CCCceEEEeecCCHHHHHHHHHh-
Q psy14567         10 DRTNTKGGDYPKPG-IGRCIVEKLSQHEAIIIAL-SKTQANLDSLK----QA----FPNVQTVQVDLQDWARTRAAVSK-   78 (238)
Q Consensus        10 ~~~~v~~itG~s~g-IG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~----~~----~~~~~~~~~D~~~~~~v~~~~~~-   78 (238)
                      .+.++++||||++| ||+++|++|++.|++|+++ +|+.+.++++.    ++    ...+.+++||++|++++++++++ 
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i  752 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  752 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence            35678999999998 9999999999999999998 67766654432    22    23578899999999999988864 


Q ss_pred             --------cC-CccEEEEccCCCCCC-CCCCCC--hHHHHHHHHHHHHHHHHHHHHHH--HHHHHhccCCceEEEEcccc
Q psy14567         79 --------VG-PVDVLINNAAVARFD-RFLDID--EENLIDSIFDVNIKAVINISQVV--SKTMIDHKIQGSIVNVSSIA  144 (238)
Q Consensus        79 --------~g-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~--~~~~~~~~~~g~iv~isS~~  144 (238)
                              +| ++|+||||||+.... ++.+.+  .++ |++++++|+.+++.+++.+  .|.|.+++ .|+||++||..
T Consensus       753 ~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~-~~~v~~vNv~g~~~l~~a~~~lp~m~~~~-~G~IVnISS~a  830 (1887)
T 2uv8_A          753 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEF-AHRIMLTNILRMMGCVKKQKSARGIETRP-AQVILPMSPNH  830 (1887)
T ss_dssp             HSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHH-HHHHHTHHHHHHHHHHHHHHHTTTCCSCC-EEEEEEECSCT
T ss_pred             HHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHH-HHHHHHHHHHHHHHHHHHHHhhhhhhhCC-CCEEEEEcChH
Confidence                    45 899999999988766 777777  676 9999999999999999988  67776654 58999999999


Q ss_pred             ccccCCCCchhhHHHHHHHHH-HHHHHHHhCCCCeEEEEEeCCcee-cCcccCCCCCCCccCCcccCCCCCCcCCCCCcc
Q psy14567        145 GKTALEGHTIYSASKAALDSI-TRTMALELGPYNIRVNSVQPTVVM-TQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPK  222 (238)
Q Consensus       145 ~~~~~~~~~~y~~sK~al~~l-~~~l~~~~~~~~i~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia  222 (238)
                      +..+  +...|++||+++++| .+.++.+++++ |+||+|+||+++ |+|....    +.........|+ |..+|+|+|
T Consensus       831 g~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~----~~~~~~~~~~pl-r~~sPEEVA  902 (1887)
T 2uv8_A          831 GTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN----NIIAEGIEKMGV-RTFSQKEMA  902 (1887)
T ss_dssp             TCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----C----CTTHHHHHTTSC-CCEEHHHHH
T ss_pred             hccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccc----hhHHHHHHhcCC-CCCCHHHHH
Confidence            8776  677999999999999 89999999988 999999999999 7886431    111122234555 667999999


Q ss_pred             cccccccccc
Q psy14567        223 PWNRWLLPSV  232 (238)
Q Consensus       223 ~~~~~l~s~~  232 (238)
                      +.++||+|+.
T Consensus       903 ~avlfLaSd~  912 (1887)
T 2uv8_A          903 FNLLGLLTPE  912 (1887)
T ss_dssp             HHHHGGGSHH
T ss_pred             HHHHHHhCCC
Confidence            9999999875

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.97  E-value=1e-33  Score=226.50  Aligned_cols=201  Identities=22%  Similarity=0.256  Sum_probs=165.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEEccCC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLINNAAV   91 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~~ag~   91 (238)
                      ++++||||+||||++++++|+++|++|++++|+.++.+.         .+.+|++++++++++++++ +++|+||||||.
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~   72 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAGV   72 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------cccCCcccHHHHHHHHHHcCCCccEEEECCCC
Confidence            578999999999999999999999999999998765321         1578999999999999888 789999999997


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC----------------------
Q psy14567         92 ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL----------------------  149 (238)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------------  149 (238)
                      ...       .++ ++..+++|+.+++.+++++.+.|.+++ .++||++||..+..+.                      
T Consensus        73 ~~~-------~~~-~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  143 (255)
T 2dkn_A           73 GVT-------AAN-SGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELA  143 (255)
T ss_dssp             CTT-------SSC-HHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHH
T ss_pred             CCc-------chh-HHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccccccchhhhhcccchhhhhhhc
Confidence            642       122 788899999999999999999998765 5899999999876543                      


Q ss_pred             ----CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCC--CCCCcCCCCCccc
Q psy14567        150 ----EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKT--PLGRFAGKLKPKP  223 (238)
Q Consensus       150 ----~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~ia~  223 (238)
                          ++...|+.+|++++.+++.++.++++.||+++.++||++.|++....... ..........  |.+++.+++|+|+
T Consensus       144 ~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~  222 (255)
T 2dkn_A          144 EQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKAD-PRYGESTRRFVAPLGRGSEPREVAE  222 (255)
T ss_dssp             HHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHC-TTTHHHHHSCCCTTSSCBCHHHHHH
T ss_pred             cccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccc-hhhHHHHHHHHHHhcCCCCHHHHHH
Confidence                45678999999999999999999988899999999999999986432111 1111111111  7889999999999


Q ss_pred             ccccccccc
Q psy14567        224 WNRWLLPSV  232 (238)
Q Consensus       224 ~~~~l~s~~  232 (238)
                      ++++++++.
T Consensus       223 ~~~~l~~~~  231 (255)
T 2dkn_A          223 AIAFLLGPQ  231 (255)
T ss_dssp             HHHHHHSGG
T ss_pred             HHHHHhCCC
Confidence            999999874

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.97  E-value=1.6e-31  Score=255.06  Aligned_cols=213  Identities=15%  Similarity=0.117  Sum_probs=171.0

Q ss_pred             CCcCCCCCCCCCCc-hHHHHHHHHhhCCCEEEEec-CChHhHHH----HHhh----CCCceEEEeecCCHHHHHHHHHh-
Q psy14567         10 DRTNTKGGDYPKPG-IGRCIVEKLSQHEAIIIALS-KTQANLDS----LKQA----FPNVQTVQVDLQDWARTRAAVSK-   78 (238)
Q Consensus        10 ~~~~v~~itG~s~g-IG~~ia~~l~~~G~~V~~~~-r~~~~~~~----~~~~----~~~~~~~~~D~~~~~~v~~~~~~-   78 (238)
                      .+.++++||||++| ||+++|++|+++|++|++++ |+.+.+++    +.++    ...+.+++||++|++++++++++ 
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i  729 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI  729 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            34578999999999 99999999999999999984 66555433    3232    23578899999999999988864 


Q ss_pred             ------cC-CccEEEEccCCCCCC-CCCCCC--hHHHHHHHHHHHHHHHHHHHHH--HHHHHHhccCCceEEEEcccccc
Q psy14567         79 ------VG-PVDVLINNAAVARFD-RFLDID--EENLIDSIFDVNIKAVINISQV--VSKTMIDHKIQGSIVNVSSIAGK  146 (238)
Q Consensus        79 ------~g-~id~li~~ag~~~~~-~~~~~~--~~~~~~~~~~~n~~~~~~~~~~--~~~~~~~~~~~g~iv~isS~~~~  146 (238)
                            +| ++|+||||||+.... ++.+.+  .++ |++++++|+.+++.+++.  +++.|.+++ .|+||++||..+.
T Consensus       730 ~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~-~~~vl~vNv~g~~~l~~a~~~lp~M~~~~-~G~IVnISS~ag~  807 (1878)
T 2uv9_A          730 YDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSEL-AHRIMLTNLLRLLGAIKTQKKERGYETRP-AQVILPLSPNHGT  807 (1878)
T ss_dssp             HCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHH-HHHHHTHHHHHHHHHHHHHHHHHTCCSCC-EEECCEECSCSSS
T ss_pred             HHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHhCC-CCEEEEEcchhhc
Confidence                  56 899999999988766 778887  676 999999999999999977  678776554 5899999999987


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHHH-HHhCCCCeEEEEEeCCcee-cCcccCCCCCCCccCCcccCCCCCCcCCCCCcccc
Q psy14567        147 TALEGHTIYSASKAALDSITRTMA-LELGPYNIRVNSVQPTVVM-TQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPW  224 (238)
Q Consensus       147 ~~~~~~~~y~~sK~al~~l~~~l~-~~~~~~~i~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~  224 (238)
                      .+  +...|++||+++++|++.++ .+++++ |+||+|+||+++ |+|....    +.........|+ |..+|+|+|+.
T Consensus       808 ~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~----~~~~~~~~~~pl-r~~sPeEVA~a  879 (1878)
T 2uv9_A          808 FG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN----NLVAEGVEKLGV-RTFSQQEMAFN  879 (1878)
T ss_dssp             SS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH----HHTHHHHHTTTC-CCBCHHHHHHH
T ss_pred             cC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc----hhhHHHHHhcCC-CCCCHHHHHHH
Confidence            76  46799999999999988665 458876 999999999999 9986431    111112233455 55699999999


Q ss_pred             cccccccc
Q psy14567        225 NRWLLPSV  232 (238)
Q Consensus       225 ~~~l~s~~  232 (238)
                      ++||+|+.
T Consensus       880 vlfLaSd~  887 (1878)
T 2uv9_A          880 LLGLMAPA  887 (1878)
T ss_dssp             HHHHHSHH
T ss_pred             HHHHhCCc
Confidence            99999874

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.97  E-value=4.1e-30  Score=225.01  Aligned_cols=211  Identities=15%  Similarity=0.105  Sum_probs=171.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCE-EEEe-cCCh-------------Hh----HHHHHhhCCCceEEEeecCCHH
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAI-IIAL-SKTQ-------------AN----LDSLKQAFPNVQTVQVDLQDWA   70 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~-V~~~-~r~~-------------~~----~~~~~~~~~~~~~~~~D~~~~~   70 (238)
                      +..++++||||+||||.++|++|+++|++ |+++ +|+.             +.    .+++.+...++.++.||++|++
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~  328 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAE  328 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHH
Confidence            35678999999999999999999999996 7777 8883             22    3345555567899999999999


Q ss_pred             HHHHHHHhc---CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc
Q psy14567         71 RTRAAVSKV---GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT  147 (238)
Q Consensus        71 ~v~~~~~~~---g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  147 (238)
                      +++++++++   +++|+||||||+.....+.+.+.++ |+.++++|+.+++++.+.+.+.+.+++..++||++||..+..
T Consensus       329 ~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~-~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~  407 (525)
T 3qp9_A          329 AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADA-LARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW  407 (525)
T ss_dssp             HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHH-HHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred             HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHH-HHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence            999999875   7899999999999888888999998 999999999999999999999987654347999999999999


Q ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccc
Q psy14567        148 ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRW  227 (238)
Q Consensus       148 ~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~  227 (238)
                      +.++...|+++|+++++|+    .++..+||++++|+||+++|+|....    ..... .....+ +..+|++.++.+.+
T Consensus       408 g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~----~~~~~-~~~~g~-~~l~pee~a~~l~~  477 (525)
T 3qp9_A          408 GGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEG----ATGER-LRRLGL-RPLAPATALTALDT  477 (525)
T ss_dssp             CCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSS----HHHHH-HHHTTB-CCBCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccch----hhHHH-HHhcCC-CCCCHHHHHHHHHH
Confidence            9999999999999999874    56778899999999999999997421    11111 111111 34689999999988


Q ss_pred             cccc
Q psy14567        228 LLPS  231 (238)
Q Consensus       228 l~s~  231 (238)
                      ++++
T Consensus       478 ~l~~  481 (525)
T 3qp9_A          478 ALGH  481 (525)
T ss_dssp             HHHH
T ss_pred             HHhC
Confidence            8765

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.95  E-value=6.4e-28  Score=209.19  Aligned_cols=205  Identities=17%  Similarity=0.157  Sum_probs=160.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHh---H----HHHHhhCCCceEEEeecCCHHHHHHHHHhc---C
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQAN---L----DSLKQAFPNVQTVQVDLQDWARTRAAVSKV---G   80 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~---~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~---g   80 (238)
                      .++++||||+||||++++++|+++|+ +|++++|+...   .    +++.+...++.++.||++|+++++++++++   +
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g  318 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA  318 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence            37899999999999999999999999 89999997422   2    334444557899999999999999999876   6


Q ss_pred             CccEEEEccCCC-CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         81 PVDVLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        81 ~id~li~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      ++|++|||||+. ...++.+.+.++ |++++++|+.+++++.+.+.+.    . .++||++||..+..+.++...|+++|
T Consensus       319 ~ld~vVh~AGv~~~~~~l~~~t~e~-~~~vl~~nv~g~~~L~~~~~~~----~-~~~iV~~SS~a~~~g~~g~~~YaAaK  392 (496)
T 3mje_A          319 PLTAVFHSAGVAHDDAPVADLTLGQ-LDALMRAKLTAARHLHELTADL----D-LDAFVLFSSGAAVWGSGGQPGYAAAN  392 (496)
T ss_dssp             CEEEEEECCCCCCSCCCTTTCCHHH-HHHHHHTTHHHHHHHHHHHTTS----C-CSEEEEEEEHHHHTTCTTCHHHHHHH
T ss_pred             CCeEEEECCcccCCCCCcccCCHHH-HHHHHHHHHHHHHHHHHHhhcc----C-CCEEEEEeChHhcCCCCCcHHHHHHH
Confidence            899999999998 667888888888 9999999999999999887543    2 57999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +++++|++.++    ..||++++|+||++.++.....   .+....+. ...+ +..+|++.++.+.+++..
T Consensus       393 a~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~---~~~~~~l~-~~g~-~~l~pe~~~~~l~~~l~~  455 (496)
T 3mje_A          393 AYLDALAEHRR----SLGLTASSVAWGTWGEVGMATD---PEVHDRLV-RQGV-LAMEPEHALGALDQMLEN  455 (496)
T ss_dssp             HHHHHHHHHHH----HTTCCCEEEEECEESSSCC---------CHHHH-HTTE-EEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH----hcCCeEEEEECCcccCCccccC---hHHHHHHH-hcCC-CCCCHHHHHHHHHHHHcC
Confidence            99999987654    4599999999999977643221   11111111 1111 123677777776666554

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.95  E-value=2.5e-28  Score=242.98  Aligned_cols=215  Identities=15%  Similarity=0.148  Sum_probs=159.4

Q ss_pred             CCcCCCCCCCCCCc-hHHHHHHHHhhCCCEEEEecCChHh-----HHHHHhhC----CCceEEEeecCCHHHHHHHHH--
Q psy14567         10 DRTNTKGGDYPKPG-IGRCIVEKLSQHEAIIIALSKTQAN-----LDSLKQAF----PNVQTVQVDLQDWARTRAAVS--   77 (238)
Q Consensus        10 ~~~~v~~itG~s~g-IG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~--   77 (238)
                      .+.++++||||++| ||+++|+.|+++|++|++++|+.+.     ++++.++.    ..+..+++|++++++++++++  
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            46788999999999 9999999999999999999998765     55555543    246788999999999988864  


Q ss_pred             ------hcCCccEEEEccCC----CCC-CCCCCCChHH---HHHHHHHHHHHHHHHHHHHHHHHHHhccCCc---eEEEE
Q psy14567         78 ------KVGPVDVLINNAAV----ARF-DRFLDIDEEN---LIDSIFDVNIKAVINISQVVSKTMIDHKIQG---SIVNV  140 (238)
Q Consensus        78 ------~~g~id~li~~ag~----~~~-~~~~~~~~~~---~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g---~iv~i  140 (238)
                            ++|++|++|||||+    ... ....+.+.++   .++..+++|+.+.+.+++.+.+.|..++..+   .++..
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence                  45889999999998    211 1222222222   2455689999999999999999998765221   23333


Q ss_pred             ccccccccCCCCchhhHHHHHHHHHHHHHHHH--hCCCCeEEEEEeCCcee-cCcccCCCCCCCccCCcccCCCCCCcCC
Q psy14567        141 SSIAGKTALEGHTIYSASKAALDSITRTMALE--LGPYNIRVNSVQPTVVM-TQMGRTGWSDPAKAGPMLAKTPLGRFAG  217 (238)
Q Consensus       141 sS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~--~~~~~i~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~r~~~  217 (238)
                      ++..+  ..++..+|++||+|+.+|+++++.|  +++ +|+||+++||+++ |++....    +.........+.+++ +
T Consensus      2294 ss~~g--~~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~----~~~~~~~~~~~~r~~-~ 2365 (3089)
T 3zen_D         2294 SPNRG--MFGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQN----DAIVSAVEEAGVTTY-T 2365 (3089)
T ss_dssp             CSSTT--SCSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTT----TTTHHHHGGGSCBCE-E
T ss_pred             Ccccc--cCCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccc----hhHHHHHHhcCCCCC-C
Confidence            33332  2234568999999999999999999  665 6999999999999 6664321    111122233454544 9


Q ss_pred             CCCcccccccccccc
Q psy14567        218 KLKPKPWNRWLLPSV  232 (238)
Q Consensus       218 ~~~ia~~~~~l~s~~  232 (238)
                      |+|||+.++||+|+.
T Consensus      2366 PeEIA~avlfLaS~~ 2380 (3089)
T 3zen_D         2366 TDEMAAMLLDLCTVE 2380 (3089)
T ss_dssp             HHHHHHHHHHTTSHH
T ss_pred             HHHHHHHHHHHhChh
Confidence            999999999999974

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=2.4e-28  Score=197.15  Aligned_cols=194  Identities=17%  Similarity=0.112  Sum_probs=149.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ++++++||||+||||++++++|+++|++|++++|++...+     ..++.++.+|++|+++++++++   ++|+||||||
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~---~~D~vi~~Ag   73 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----GPNEECVQCDLADANAVNAMVA---GCDGIVHLGG   73 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----CTTEEEEECCTTCHHHHHHHHT---TCSEEEECCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----CCCCEEEEcCCCCHHHHHHHHc---CCCEEEECCC
Confidence            3568899999999999999999999999999999976532     4578899999999999999988   5899999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc------------ccCCCCchhhHH
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK------------TALEGHTIYSAS  158 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------------~~~~~~~~y~~s  158 (238)
                      ...        .++ |+.++++|+.+++.+++++.+    .+ .++||++||..+.            .+.++...|+.|
T Consensus        74 ~~~--------~~~-~~~~~~~N~~g~~~l~~a~~~----~~-~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~s  139 (267)
T 3rft_A           74 ISV--------EKP-FEQILQGNIIGLYNLYEAARA----HG-QPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVS  139 (267)
T ss_dssp             CCS--------CCC-HHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHH
T ss_pred             CcC--------cCC-HHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHH
Confidence            842        223 788899999999999999843    33 5799999998775            344566899999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccC-----CCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT-----GWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~-----~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      |.+.+.+++.++.++   |++++.|.||.+.+++...     +....+.      ...+.+..++++++..+.|++++..
T Consensus       140 K~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~~~~~~~~~~d~------a~~~~~~~~~~~~~~~~~~~~s~~~  210 (267)
T 3rft_A          140 KCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYRMLSTWFSHDDF------VSLIEAVFRAPVLGCPVVWGASAND  210 (267)
T ss_dssp             HHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTTHHHHBCCHHHH------HHHHHHHHHCSCCCSCEEEECCCCT
T ss_pred             HHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCCceeeEEcHHHH------HHHHHHHHhCCCCCceEEEEeCCCC
Confidence            999999999999887   5677777777776654321     1111110      0123455667777778888887754


Q ss_pred             cc
Q psy14567        234 LN  235 (238)
Q Consensus       234 ~~  235 (238)
                      ..
T Consensus       211 ~~  212 (267)
T 3rft_A          211 AG  212 (267)
T ss_dssp             TC
T ss_pred             CC
Confidence            43

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.94  E-value=1e-27  Score=218.87  Aligned_cols=172  Identities=14%  Similarity=0.173  Sum_probs=148.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHh-hCCC-EEEEecCCh---Hh----HHHHHhhCCCceEEEeecCCHHHHHHHHHhc-
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLS-QHEA-IIIALSKTQ---AN----LDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-   79 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~-~~G~-~V~~~~r~~---~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-   79 (238)
                      +..++++||||+||||+++|++|+ ++|+ +|++++|+.   +.    .+++.+...++.++.||++|+++++++++++ 
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~  607 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP  607 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            356789999999999999999999 7999 699999983   22    3344444557899999999999999999876 


Q ss_pred             --CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhH
Q psy14567         80 --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSA  157 (238)
Q Consensus        80 --g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~  157 (238)
                        .++|++|||||+.....+.+++.++ |++.+++|+.+++++.+++.|.|       +||++||.++..+.+++..|++
T Consensus       608 ~~~~id~lVnnAGv~~~~~~~~~t~e~-~~~~~~~nv~G~~~l~~~~~~~l-------~iV~~SS~ag~~g~~g~~~YaA  679 (795)
T 3slk_A          608 DEHPLTAVVHAAGVLDDGVSESLTVER-LDQVLRPKVDGARNLLELIDPDV-------ALVLFSSVSGVLGSGGQGNYAA  679 (795)
T ss_dssp             TTSCEEEEEECCCCCCCCCGGGCCHHH-HHHHHCCCCCHHHHHHHHSCTTS-------EEEEEEETHHHHTCSSCHHHHH
T ss_pred             HhCCCEEEEECCCcCCCCchhhCCHHH-HHHHHHHHHHHHHHHHHHHhhCC-------EEEEEccHHhcCCCCCCHHHHH
Confidence              3799999999999888888999998 99999999999999999986655       7999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~  193 (238)
                      +|+    |+++++.++.++||++|+|+||+++|++.
T Consensus       680 aka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~  711 (795)
T 3slk_A          680 ANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGM  711 (795)
T ss_dssp             HHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCH
T ss_pred             HHH----HHHHHHHHHHHcCCeEEEEECCeECcchh
Confidence            996    44555566666799999999999998753

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.94  E-value=5.7e-26  Score=198.11  Aligned_cols=204  Identities=15%  Similarity=0.118  Sum_probs=162.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHh---H----HHHHhhCCCceEEEeecCCHHHHHHHHHhcCCc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQAN---L----DSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV   82 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~---~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~i   82 (238)
                      ..++++||||+||||.+++++|+++|+ +|++++|+...   .    +++.+...++.++.||++|++++++++++ +++
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~-~~l  336 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA-YPP  336 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH-SCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc-CCC
Confidence            457899999999999999999999999 79999998632   2    23443344688999999999999999988 789


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHH
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAAL  162 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al  162 (238)
                      |+||||||+.....+.+.+.++ ++.++++|+.+++++.+.+.+.   .+ .++||++||..+..+.++...|+++|+++
T Consensus       337 d~VVh~AGv~~~~~~~~~~~~~-~~~~~~~nv~g~~~L~~~~~~~---~~-~~~~V~~SS~a~~~g~~g~~~YaaaKa~l  411 (511)
T 2z5l_A          337 NAVFHTAGILDDAVIDTLSPES-FETVRGAKVCGAELLHQLTADI---KG-LDAFVLFSSVTGTWGNAGQGAYAAANAAL  411 (511)
T ss_dssp             SEEEECCCCCCCBCGGGCCHHH-HHHHHHHHHHHHHHHHHHTSSC---TT-CCCEEEEEEGGGTTCCTTBHHHHHHHHHH
T ss_pred             cEEEECCcccCCcccccCCHHH-HHHHHHHHHHHHHHHHHHHhhc---cC-CCEEEEEeCHHhcCCCCCCHHHHHHHHHH
Confidence            9999999998777777888888 9999999999999998876432   12 57999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCce-ecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVV-MTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +.|++.++    ..|+++++|+||++ +|.|....  ..   ..+ .... -...+++++++.+..++..
T Consensus       412 d~la~~~~----~~gi~v~sv~pG~~~~tgm~~~~--~~---~~~-~~~g-~~~l~~e~~a~~l~~al~~  470 (511)
T 2z5l_A          412 DALAERRR----AAGLPATSVAWGLWGGGGMAAGA--GE---ESL-SRRG-LRAMDPDAAVDALLGAMGR  470 (511)
T ss_dssp             HHHHHHHH----TTTCCCEEEEECCBCSTTCCCCH--HH---HHH-HHHT-BCCBCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHH----HcCCcEEEEECCcccCCcccccc--cH---HHH-HhcC-CCCCCHHHHHHHHHHHHhC
Confidence            99998653    45899999999999 77775321  00   000 0111 1346788888888777654

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.93  E-value=3.2e-26  Score=181.30  Aligned_cols=191  Identities=12%  Similarity=0.053  Sum_probs=148.8

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCc-eEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNV-QTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      +..+.++++||||+|+||++++++|+++|++|++++|+.++.+++...  ++ .++++|++  +   ++.+.++++|+||
T Consensus        17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~--~~~~~~~~Dl~--~---~~~~~~~~~D~vi   89 (236)
T 3e8x_A           17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER--GASDIVVANLE--E---DFSHAFASIDAVV   89 (236)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT--TCSEEEECCTT--S---CCGGGGTTCSEEE
T ss_pred             cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC--CCceEEEcccH--H---HHHHHHcCCCEEE
Confidence            344556789999999999999999999999999999999988877653  67 89999998  3   3344456899999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC---CCCchhhHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL---EGHTIYSASKAALD  163 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---~~~~~y~~sK~al~  163 (238)
                      ||||....        ++ ++..+++|+.++..+++++.+    .+ .++||++||..+..+.   ++...|+.+|.+++
T Consensus        90 ~~ag~~~~--------~~-~~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e  155 (236)
T 3e8x_A           90 FAAGSGPH--------TG-ADKTILIDLWGAIKTIQEAEK----RG-IKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLAD  155 (236)
T ss_dssp             ECCCCCTT--------SC-HHHHHHTTTHHHHHHHHHHHH----HT-CCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHH
T ss_pred             ECCCCCCC--------CC-ccccchhhHHHHHHHHHHHHH----cC-CCEEEEEecCCCCCCCCChhhhhhHHHHHHHHH
Confidence            99997642        23 788899999999999999843    33 5799999998776554   46789999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+++       ..|++++.+.||++.+++......      ..........+..++|+|+++.+++++.
T Consensus       156 ~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~------~~~~~~~~~~~i~~~Dva~~~~~~~~~~  211 (236)
T 3e8x_A          156 DELK-------RSSLDYTIVRPGPLSNEESTGKVT------VSPHFSEITRSITRHDVAKVIAELVDQQ  211 (236)
T ss_dssp             HHHH-------HSSSEEEEEEECSEECSCCCSEEE------EESSCSCCCCCEEHHHHHHHHHHHTTCG
T ss_pred             HHHH-------HCCCCEEEEeCCcccCCCCCCeEE------eccCCCcccCcEeHHHHHHHHHHHhcCc
Confidence            9876       458999999999999986432111      0111122466789999999999999875

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.93  E-value=1.6e-25  Score=194.49  Aligned_cols=204  Identities=15%  Similarity=0.096  Sum_probs=159.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHh---H----HHHHhhCCCceEEEeecCCHHHHHHHHHhc---
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQAN---L----DSLKQAFPNVQTVQVDLQDWARTRAAVSKV---   79 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~---~----~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~---   79 (238)
                      ..++++||||+||||.+++++|+++|+ +|++++|+...   .    +++.+...++.++.||++|++++.++++++   
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~  304 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD  304 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhc
Confidence            457899999999999999999999999 59999998742   2    234444456889999999999999999876   


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      +++|+||||||+.....+.+.+.++ ++.++++|+.+++++.+.+.+    .+ .++||++||..+..+.++...|+++|
T Consensus       305 g~ld~VIh~AG~~~~~~l~~~~~~~-~~~~~~~nv~g~~~L~~~~~~----~~-~~~~V~~SS~a~~~g~~g~~~Yaaak  378 (486)
T 2fr1_A          305 VPLSAVFHAAATLDDGTVDTLTGER-IERASRAKVLGARNLHELTRE----LD-LTAFVLFSSFASAFGAPGLGGYAPGN  378 (486)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHH-HHHHTHHHHHHHHHHHHHHTT----SC-CSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred             CCCcEEEECCccCCCCccccCCHHH-HHHHHHHHHHHHHHHHHHhCc----CC-CCEEEEEcChHhcCCCCCCHHHHHHH
Confidence            6899999999998777777888888 999999999999999988743    23 57999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecC-cccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQ-MGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~-~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++++.|++.++    ..|+++++|+||++.++ |.....     ...+. ... -...++++.++.+..++..
T Consensus       379 a~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~~~-----~~~~~-~~g-~~~i~~e~~a~~l~~~l~~  440 (486)
T 2fr1_A          379 AYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGPV-----ADRFR-RHG-VIEMPPETACRALQNALDR  440 (486)
T ss_dssp             HHHHHHHHHHH----HTTCCCEEEEECCBC-----------------CT-TTT-EECBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHH----hcCCeEEEEECCeeCCCcccchhH-----HHHHH-hcC-CCCCCHHHHHHHHHHHHhC
Confidence            99999877654    35899999999999886 432210     01110 111 1346888888888777654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.93  E-value=2e-25  Score=175.04  Aligned_cols=181  Identities=10%  Similarity=-0.013  Sum_probs=141.3

Q ss_pred             cCCCCCCCCCCchHHHHHHHHh-hCCCEEEEecCChH-hHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLS-QHEAIIIALSKTQA-NLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~-~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +++++||||+||||++++++|+ +.|++|++++|+++ +++++....+++.++++|++|+++++++++   ++|++|||+
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d~vv~~a   81 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVT---NAEVVFVGA   81 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHT---TCSEEEESC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHc---CCCEEEEcC
Confidence            4668999999999999999999 89999999999998 777775456689999999999999999887   579999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCc----------hhhHHH
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHT----------IYSASK  159 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~----------~y~~sK  159 (238)
                      |..                    |+.     ++.+++.+.+.+ .++||++||..+..+.+...          .|+.+|
T Consensus        82 g~~--------------------n~~-----~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K  135 (221)
T 3r6d_A           82 MES--------------------GSD-----MASIVKALSRXN-IRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGE  135 (221)
T ss_dssp             CCC--------------------HHH-----HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHH
T ss_pred             CCC--------------------Chh-----HHHHHHHHHhcC-CCeEEEEeeceecCCCCcccccccccccccHHHHHH
Confidence            853                    222     677778887766 57999999988766544333          899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccc--cccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLL--PSVG  233 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~--s~~~  233 (238)
                      .+++.+++.       .|++++.|.||++.++.....+.     .........++..+++|+|+++++++  ++..
T Consensus       136 ~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~-----~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~  199 (221)
T 3r6d_A          136 RQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYE-----LIPEGAQFNDAQVSREAVVKAIFDILHAADET  199 (221)
T ss_dssp             HHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCE-----EECTTSCCCCCEEEHHHHHHHHHHHHTCSCCG
T ss_pred             HHHHHHHHh-------CCCCEEEEechhhcCCCCCccee-----eccCCccCCCceeeHHHHHHHHHHHHHhcChh
Confidence            999988763       58999999999998873221110     00011122344788999999999999  7753

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.92  E-value=1.1e-26  Score=184.36  Aligned_cols=194  Identities=11%  Similarity=0.083  Sum_probs=146.5

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      .++++||||+||||++++++|+++|+  +|++++|+.+..++...  .++.++.+|++|+++++++++   ++|++||||
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~a   92 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY--KNVNQEVVDFEKLDDYASAFQ---GHDVGFCCL   92 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG--GGCEEEECCGGGGGGGGGGGS---SCSEEEECC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc--CCceEEecCcCCHHHHHHHhc---CCCEEEECC
Confidence            45789999999999999999999999  99999998765433221  357889999999988777765   689999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHH
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTM  169 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l  169 (238)
                      |....       ..+ ++..+++|+.++..+++++.    +.+ .++||++||..+..  ++...|+.+|++++.+++.+
T Consensus        93 g~~~~-------~~~-~~~~~~~n~~~~~~~~~~~~----~~~-~~~iv~~SS~~~~~--~~~~~Y~~sK~~~e~~~~~~  157 (242)
T 2bka_A           93 GTTRG-------KAG-AEGFVRVDRDYVLKSAELAK----AGG-CKHFNLLSSKGADK--SSNFLYLQVKGEVEAKVEEL  157 (242)
T ss_dssp             CCCHH-------HHH-HHHHHHHHTHHHHHHHHHHH----HTT-CCEEEEECCTTCCT--TCSSHHHHHHHHHHHHHHTT
T ss_pred             Ccccc-------cCC-cccceeeeHHHHHHHHHHHH----HCC-CCEEEEEccCcCCC--CCcchHHHHHHHHHHHHHhc
Confidence            96532       123 67788999999988888764    333 57999999987654  34568999999999998764


Q ss_pred             HHHhCCCCe-EEEEEeCCceecCcccCCCCCCCccCCcccCCC----CCCcCCCCCccccccccccccc
Q psy14567        170 ALELGPYNI-RVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTP----LGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       170 ~~~~~~~~i-~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~----~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                             ++ +++.|.||++.|++..... ............|    .+++..++|+|+++++++++..
T Consensus       158 -------~~~~~~~vrpg~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~  218 (242)
T 2bka_A          158 -------KFDRYSVFRPGVLLCDRQESRP-GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  218 (242)
T ss_dssp             -------CCSEEEEEECCEEECTTGGGSH-HHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             -------CCCCeEEEcCceecCCCCCCcH-HHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCcc
Confidence                   45 8999999999999643210 0011111111223    5678999999999999998753

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.90  E-value=7.4e-25  Score=180.82  Aligned_cols=205  Identities=13%  Similarity=0.089  Sum_probs=153.9

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      ..+.++++||||+|+||++++++|++.|++|++++|+.+. +.    . ++.++.+|++|++++.++++. +++|+|||+
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-~~~~~~~Dl~d~~~~~~~~~~-~~~d~vih~   81 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-NVEMISLDIMDSQRVKKVISD-IKPDYIFHL   81 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-TEEEEECCTTCHHHHHHHHHH-HCCSEEEEC
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-eeeEEECCCCCHHHHHHHHHh-cCCCEEEEc
Confidence            3467788999999999999999999999999999998765 22    2 678899999999999998876 468999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-------------CCCCchh
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-------------LEGHTIY  155 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-------------~~~~~~y  155 (238)
                      ||.....    .+.++ ++..+++|+.++..+++++ +.+.  + .+++|++||......             ..+...|
T Consensus        82 A~~~~~~----~~~~~-~~~~~~~Nv~g~~~l~~a~-~~~~--~-~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y  152 (321)
T 2pk3_A           82 AAKSSVK----DSWLN-KKGTFSTNVFGTLHVLDAV-RDSN--L-DCRILTIGSSEEYGMILPEESPVSEENQLRPMSPY  152 (321)
T ss_dssp             CSCCCHH----HHTTC-HHHHHHHHHHHHHHHHHHH-HHHT--C-CCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHH
T ss_pred             Ccccchh----hhhhc-HHHHHHHHHHHHHHHHHHH-HHhC--C-CCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCcc
Confidence            9976421    11223 6788999999999999999 4442  2 579999999864322             2456799


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCc--------------cCCcccCCCCCCcCCCCCc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK--------------AGPMLAKTPLGRFAGKLKP  221 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~--------------~~~~~~~~~~~r~~~~~~i  221 (238)
                      +.+|.+.+.+++.++.++   |++++.+.||.+.++........+.+              ........+...+..++|+
T Consensus       153 ~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dv  229 (321)
T 2pk3_A          153 GVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDI  229 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHH
Confidence            999999999999998875   79999999999999875321000000              0011122344567899999


Q ss_pred             ccccccccccc
Q psy14567        222 KPWNRWLLPSV  232 (238)
Q Consensus       222 a~~~~~l~s~~  232 (238)
                      |+++++++++.
T Consensus       230 a~a~~~~~~~~  240 (321)
T 2pk3_A          230 VQAYWLLSQYG  240 (321)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHhCC
Confidence            99999988653

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.90  E-value=6.2e-24  Score=169.20  Aligned_cols=201  Identities=11%  Similarity=-0.020  Sum_probs=146.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhC--CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQH--EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      .+++++||||+|+||++++++|++.  |++|++++|+.++.+++   ..++.++.+|++|++++.++++   ++|++||+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~   76 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI---GGEADVFIGDITDADSINPAFQ---GIDALVIL   76 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT---TCCTTEEECCTTSHHHHHHHHT---TCSEEEEC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc---CCCeeEEEecCCCHHHHHHHHc---CCCEEEEe
Confidence            4567899999999999999999999  89999999998776554   3467899999999999999887   48999999


Q ss_pred             cCCCCCCCC---------CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCc-----h
Q psy14567         89 AAVARFDRF---------LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHT-----I  154 (238)
Q Consensus        89 ag~~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~-----~  154 (238)
                      ||.......         .+...++ ++..+++|+.++..+++++.+.    + .+++|++||..+..+..+..     .
T Consensus        77 a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~~~~~~  150 (253)
T 1xq6_A           77 TSAVPKMKPGFDPTKGGRPEFIFED-GQYPEQVDWIGQKNQIDAAKVA----G-VKHIVVVGSMGGTNPDHPLNKLGNGN  150 (253)
T ss_dssp             CCCCCEECTTCCTTSSCCCCEECCT-TCSHHHHTTHHHHHHHHHHHHH----T-CSEEEEEEETTTTCTTCGGGGGGGCC
T ss_pred             ccccccccccccccccccchhhccc-cccceeeeHHHHHHHHHHHHHc----C-CCEEEEEcCccCCCCCCccccccchh
Confidence            997642111         1111222 4566789999999988887542    3 46999999988754433333     3


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+.+|.+++.+++.       .|++++.+.||.+.++.................  +..++..++|+|+++.+++.+.
T Consensus       151 y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dva~~~~~~~~~~  219 (253)
T 1xq6_A          151 ILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQ--TDTKTVPRADVAEVCIQALLFE  219 (253)
T ss_dssp             HHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEESTTGGGG--SSCCEEEHHHHHHHHHHHTTCG
T ss_pred             HHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCCcCCcC--CCCcEEcHHHHHHHHHHHHcCc
Confidence            56699999988753       589999999999999864311000000011111  2345789999999999998764

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.90  E-value=4.5e-24  Score=177.36  Aligned_cols=206  Identities=15%  Similarity=0.115  Sum_probs=154.9

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh-----CCCceEE-EeecCCHHHHHHHHHhcCCcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA-----FPNVQTV-QVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~-~~D~~~~~~v~~~~~~~g~id   83 (238)
                      .+.++++||||+|+||++++++|++.|++|++++|+.+..+.+.+.     .+++.++ .+|++|+++++++++   ++|
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---~~d   85 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK---GAA   85 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT---TCS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc---CCC
Confidence            3456789999999999999999999999999999998876655433     2467788 799999888777665   689


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-cC-------------
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-AL-------------  149 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~-------------  149 (238)
                      +|||+||.....       ++ ++..+++|+.++..+++++.+.   .+ .+++|++||..... +.             
T Consensus        86 ~vih~A~~~~~~-------~~-~~~~~~~n~~g~~~ll~~~~~~---~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~  153 (342)
T 1y1p_A           86 GVAHIASVVSFS-------NK-YDEVVTPAIGGTLNALRAAAAT---PS-VKRFVLTSSTVSALIPKPNVEGIYLDEKSW  153 (342)
T ss_dssp             EEEECCCCCSCC-------SC-HHHHHHHHHHHHHHHHHHHHTC---TT-CCEEEEECCGGGTCCCCTTCCCCEECTTCC
T ss_pred             EEEEeCCCCCCC-------CC-HHHHHHHHHHHHHHHHHHHHhC---CC-CcEEEEeccHHHhcCCCCCCCCcccCcccc
Confidence            999999976432       12 5678899999999999998641   22 47999999986542 11             


Q ss_pred             -----------------CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC---CCccCCc---
Q psy14567        150 -----------------EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD---PAKAGPM---  206 (238)
Q Consensus       150 -----------------~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~---~~~~~~~---  206 (238)
                                       .+...|+.+|.+.+.+++.++.+++. +++++.+.||.+.+++.......   ..+...+   
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  232 (342)
T 1y1p_A          154 NLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNG  232 (342)
T ss_dssp             CHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTT
T ss_pred             CchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcC
Confidence                             12358999999999999999999876 89999999999999875432110   0000000   


Q ss_pred             -----ccCCCCCCcCCCCCccccccccccc
Q psy14567        207 -----LAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       207 -----~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                           ....+...+..++|+|+++++++.+
T Consensus       233 ~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  262 (342)
T 1y1p_A          233 EVSPALALMPPQYYVSAVDIGLLHLGCLVL  262 (342)
T ss_dssp             CCCHHHHTCCSEEEEEHHHHHHHHHHHHHC
T ss_pred             CCccccccCCcCCEeEHHHHHHHHHHHHcC
Confidence                 1111345678899999999888765

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.90  E-value=2.7e-24  Score=178.36  Aligned_cols=204  Identities=13%  Similarity=0.068  Sum_probs=147.8

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      +..+.++++||||+|+||++++++|++.|++|++++|+.+...+..+..+++.++.+|++|.++++++++++ ++|+|||
T Consensus        16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~-~~D~vih   94 (330)
T 2pzm_A           16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF-KPTHVVH   94 (330)
T ss_dssp             STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH-CCSEEEE
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc-CCCEEEE
Confidence            344556789999999999999999999999999999976443222233357889999999999999998866 6899999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-----C------CCchhh
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-----E------GHTIYS  156 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----~------~~~~y~  156 (238)
                      +||.....     +.++ ++  +++|+.++..+++++..    .+ .+++|++||.......     +      +...|+
T Consensus        95 ~A~~~~~~-----~~~~-~~--~~~N~~~~~~l~~a~~~----~~-~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~  161 (330)
T 2pzm_A           95 SAAAYKDP-----DDWA-ED--AATNVQGSINVAKAASK----AG-VKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYG  161 (330)
T ss_dssp             CCCCCSCT-----TCHH-HH--HHHHTHHHHHHHHHHHH----HT-CSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHH
T ss_pred             CCccCCCc-----cccC-hh--HHHHHHHHHHHHHHHHH----cC-CCEEEEecCHHHhCCCccCCCCcCCCCCCCChHH
Confidence            99976432     3344 55  89999999999999874    23 4799999998764332     2      567999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeE-EEEEeCCceecCcccCCC---CCCCccCCcccCCCCCCcCCCCCccc-cccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIR-VNSVQPTVVMTQMGRTGW---SDPAKAGPMLAKTPLGRFAGKLKPKP-WNRWLLPS  231 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~-v~~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~r~~~~~~ia~-~~~~l~s~  231 (238)
                      .+|.+.+.+++.+  ++....|| ++.+.||. .+++.....   ....  ..+.... ...+..++|+|+ ++.+++++
T Consensus       162 ~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~  235 (330)
T 2pzm_A          162 ISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEG  235 (330)
T ss_dssp             HHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTT
T ss_pred             HHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhc
Confidence            9999999999887  44444566 56666774 333321100   0000  1111222 467889999999 99998875

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.89  E-value=1.1e-23  Score=166.76  Aligned_cols=183  Identities=11%  Similarity=0.024  Sum_probs=127.2

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      ++.+++++||||+|+||++++++|+++| ++|++++|+.++++++..  .++.++++|++|+++++++++   .+|+|||
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~---~~D~vv~   94 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP--TNSQIIMGDVLNHAALKQAMQ---GQDIVYA   94 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC--TTEEEEECCTTCHHHHHHHHT---TCSEEEE
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc--CCcEEEEecCCCHHHHHHHhc---CCCEEEE
Confidence            4457789999999999999999999999 899999999877544322  368899999999999999887   4799999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCc---------hhhHH
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHT---------IYSAS  158 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~---------~y~~s  158 (238)
                      |+|...            +.           ..++.+++.+++.+ .++||++||.....+.+...         .+...
T Consensus        95 ~a~~~~------------~~-----------~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~  150 (236)
T 3qvo_A           95 NLTGED------------LD-----------IQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKP  150 (236)
T ss_dssp             ECCSTT------------HH-----------HHHHHHHHHHHHTT-CCEEEEECCCCC----------------CGGGHH
T ss_pred             cCCCCc------------hh-----------HHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhcccchHHH
Confidence            998521            11           12456777777766 67999999987654433211         11122


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      +...       ...+.+.||+++.|.||++.++.....      ..........+++.+++|+|+++++++++..
T Consensus       151 ~~~~-------~~~l~~~gi~~~~vrPg~i~~~~~~~~------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~  212 (236)
T 3qvo_A          151 FRRA-------ADAIEASGLEYTILRPAWLTDEDIIDY------ELTSRNEPFKGTIVSRKSVAALITDIIDKPE  212 (236)
T ss_dssp             HHHH-------HHHHHTSCSEEEEEEECEEECCSCCCC------EEECTTSCCSCSEEEHHHHHHHHHHHHHSTT
T ss_pred             HHHH-------HHHHHHCCCCEEEEeCCcccCCCCcce------EEeccCCCCCCcEECHHHHHHHHHHHHcCcc
Confidence            2211       122346799999999999998754321      0111111234788999999999999998854

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.89  E-value=6.9e-24  Score=176.41  Aligned_cols=211  Identities=14%  Similarity=0.049  Sum_probs=153.0

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhH--HHHHhh--CCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANL--DSLKQA--FPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~--~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      .++++||||+|+||++++++|+++|++|++++|+.+..  +.+...  .+++.++.+|++|++++.++++.. ++|+|||
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vih   81 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-QPDEVYN   81 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-CCSEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-CCCEEEE
Confidence            35688999999999999999999999999999987543  223222  136888999999999999998876 6899999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-----------ccCCCCchhh
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-----------TALEGHTIYS  156 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~~~y~  156 (238)
                      +||....    +.+.++ ++..+++|+.++..+++++.+.    +..+++|++||....           .+..+...|+
T Consensus        82 ~A~~~~~----~~~~~~-~~~~~~~Nv~g~~~l~~a~~~~----~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~  152 (345)
T 2z1m_A           82 LAAQSFV----GVSFEQ-PILTAEVDAIGVLRILEALRTV----KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYA  152 (345)
T ss_dssp             CCCCCCH----HHHTTS-HHHHHHHHTHHHHHHHHHHHHH----CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred             CCCCcch----hhhhhC-HHHHHHHHHHHHHHHHHHHHHh----CCCceEEEEechhhcCCCCCCCCCccCCCCCCChhH
Confidence            9997532    112233 7788999999999999999752    113799999997532           2345567999


Q ss_pred             HHHHHHHHHHHHHHHHhC---CCCeEEEEEeCCceecCcccCC---C---CCCCccCCcccCCCCCC-cCCCCCcccccc
Q psy14567        157 ASKAALDSITRTMALELG---PYNIRVNSVQPTVVMTQMGRTG---W---SDPAKAGPMLAKTPLGR-FAGKLKPKPWNR  226 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~---~~~i~v~~i~PG~v~t~~~~~~---~---~~~~~~~~~~~~~~~~r-~~~~~~ia~~~~  226 (238)
                      .+|.+.+.+++.++.+++   ..++.++.+.||...|.+....   .   .............+..| +..++|+|+++.
T Consensus       153 ~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~  232 (345)
T 2z1m_A          153 VAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMW  232 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHH
Confidence            999999999999998876   3345678888998877653210   0   00000000111223334 789999999999


Q ss_pred             cccccc
Q psy14567        227 WLLPSV  232 (238)
Q Consensus       227 ~l~s~~  232 (238)
                      +++++.
T Consensus       233 ~~~~~~  238 (345)
T 2z1m_A          233 LMMQQP  238 (345)
T ss_dssp             HHHTSS
T ss_pred             HHHhCC
Confidence            988753

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.89  E-value=6.9e-24  Score=165.99  Aligned_cols=180  Identities=13%  Similarity=0.070  Sum_probs=144.0

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCC-HHHHHHHHHhcCCccEEEEccCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQD-WARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      .++||||+|+||++++++|+++|++|++++|+.++.++.    +++.++++|++| ++++.++++   ++|+|||+||..
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~~~~~~~~D~~d~~~~~~~~~~---~~d~vi~~ag~~   74 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----NNVKAVHFDVDWTPEEMAKQLH---GMDAIINVSGSG   74 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----TTEEEEECCTTSCHHHHHTTTT---TCSEEEECCCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----CCceEEEecccCCHHHHHHHHc---CCCEEEECCcCC
Confidence            368999999999999999999999999999998765432    578999999999 988887776   589999999976


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCC-------CchhhHHHHHHHHH
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEG-------HTIYSASKAALDSI  165 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-------~~~y~~sK~al~~l  165 (238)
                      ...             .+++|+.++..+++++.    +.+ .+++|++||..+..+.+.       ...|+.+|.+.+.+
T Consensus        75 ~~~-------------~~~~n~~~~~~l~~a~~----~~~-~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~  136 (219)
T 3dqp_A           75 GKS-------------LLKVDLYGAVKLMQAAE----KAE-VKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLY  136 (219)
T ss_dssp             TSS-------------CCCCCCHHHHHHHHHHH----HTT-CCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHH
T ss_pred             CCC-------------cEeEeHHHHHHHHHHHH----HhC-CCEEEEECcccccCCCcccccccccccHHHHHHHHHHHH
Confidence            421             35678888888888874    333 469999999887666555       78999999999998


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      ++      ...|++++.+.||.+.++.......         ...+...+..++|+|+++.+++.+..
T Consensus       137 ~~------~~~~i~~~ilrp~~v~g~~~~~~~~---------~~~~~~~~i~~~Dva~~i~~~l~~~~  189 (219)
T 3dqp_A          137 LT------KETNLDYTIIQPGALTEEEATGLID---------INDEVSASNTIGDVADTIKELVMTDH  189 (219)
T ss_dssp             HH------HSCCCEEEEEEECSEECSCCCSEEE---------ESSSCCCCEEHHHHHHHHHHHHTCGG
T ss_pred             HH------hccCCcEEEEeCceEecCCCCCccc---------cCCCcCCcccHHHHHHHHHHHHhCcc
Confidence            86      3568999999999999875432111         11345678899999999999988753

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.88  E-value=1.9e-22  Score=168.26  Aligned_cols=202  Identities=19%  Similarity=0.180  Sum_probs=155.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhC-CC-EEEEecCChHhHHHHHhhC--CCceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQH-EA-IIIALSKTQANLDSLKQAF--PNVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~-G~-~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      +.++++||||+|+||++++++|++. |+ +|++++|++.+.+++.+..  .++.++.+|++|.+++.++++   ++|+||
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~---~~D~Vi   96 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE---GVDICI   96 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT---TCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh---cCCEEE
Confidence            4567899999999999999999999 97 9999999998877765543  468899999999999888876   589999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      |+||.... +   ....+ ....+++|+.++..+++++.+.    + .+++|++||..+..   +...|+.+|++.+.++
T Consensus        97 h~Aa~~~~-~---~~~~~-~~~~~~~Nv~gt~~l~~aa~~~----~-v~~~V~~SS~~~~~---p~~~Y~~sK~~~E~~~  163 (344)
T 2gn4_A           97 HAAALKHV-P---IAEYN-PLECIKTNIMGASNVINACLKN----A-ISQVIALSTDKAAN---PINLYGATKLCSDKLF  163 (344)
T ss_dssp             ECCCCCCH-H---HHHHS-HHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEECCGGGSS---CCSHHHHHHHHHHHHH
T ss_pred             ECCCCCCC-C---chhcC-HHHHHHHHHHHHHHHHHHHHhC----C-CCEEEEecCCccCC---CccHHHHHHHHHHHHH
Confidence            99997642 1   11122 4677899999999999999764    2 46999999976543   3579999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccC---------CcccCCCCCCcCCCCCccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAG---------PMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~---------~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +.++.++++.|++++.+.||.+.++...-   .+.+..         ........+.+..++|+|+++++++.+
T Consensus       164 ~~~~~~~~~~g~~~~~vRpg~v~g~~~~~---i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~  234 (344)
T 2gn4_A          164 VSANNFKGSSQTQFSVVRYGNVVGSRGSV---VPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKR  234 (344)
T ss_dssp             HHGGGCCCSSCCEEEEECCCEETTCTTSH---HHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCcEEEEEEeccEECCCCCH---HHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhh
Confidence            99998888889999999999999865210   000000         000111223467888999988887764

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.88  E-value=5.1e-24  Score=178.53  Aligned_cols=208  Identities=15%  Similarity=0.049  Sum_probs=152.7

Q ss_pred             CCCCCCCCchHHHHHHHHhhC-CCEEEEecCCh--HhHHHHHhh--CCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQ--ANLDSLKQA--FPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~--~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      ++||||+|+||++++++|++. |++|++++|+.  ...+.+.+.  .+++.++.+|++|++++.+++++. ++|+|||+|
T Consensus         3 vlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vih~A   81 (361)
T 1kew_A            3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-QPDAVMHLA   81 (361)
T ss_dssp             EEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-CCSEEEECC
T ss_pred             EEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhc-CCCEEEECC
Confidence            689999999999999999998 79999999864  222222211  246889999999999999998764 689999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----cCCceEEEEcccccc--c----------------
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH----KIQGSIVNVSSIAGK--T----------------  147 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~g~iv~isS~~~~--~----------------  147 (238)
                      |....    +.+.++ ++..+++|+.++..+++++.+.+...    +.++++|++||....  .                
T Consensus        82 ~~~~~----~~~~~~-~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~  156 (361)
T 1kew_A           82 AESHV----DRSITG-PAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFT  156 (361)
T ss_dssp             SCCCH----HHHHHC-THHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBC
T ss_pred             CCcCh----hhhhhC-HHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCC
Confidence            97531    122334 67889999999999999999986421    112599999996532  1                


Q ss_pred             ---cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCC---------cccCCCCCCc
Q psy14567        148 ---ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGP---------MLAKTPLGRF  215 (238)
Q Consensus       148 ---~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~~r~  215 (238)
                         +..+...|+.+|.+.+.+++.++.++   |++++.+.||.+.++........+.+...         .....+...+
T Consensus       157 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (361)
T 1kew_A          157 ETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDW  233 (361)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEE
T ss_pred             CCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEee
Confidence               23456799999999999999998886   79999999999999875321000000000         1112234567


Q ss_pred             CCCCCccccccccccc
Q psy14567        216 AGKLKPKPWNRWLLPS  231 (238)
Q Consensus       216 ~~~~~ia~~~~~l~s~  231 (238)
                      ..++|+|+++++++++
T Consensus       234 i~v~Dva~a~~~~~~~  249 (361)
T 1kew_A          234 LYVEDHARALHMVVTE  249 (361)
T ss_dssp             EEHHHHHHHHHHHHHH
T ss_pred             EEHHHHHHHHHHHHhC
Confidence            7899999999988865

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.88  E-value=3.4e-23  Score=162.76  Aligned_cols=196  Identities=12%  Similarity=0.003  Sum_probs=144.6

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      ++.++||||+|+||++++++|++.|++|++++|+.++.+.+.   +++.++.+|++|++++.++++   ++|+|||+||.
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~Dl~d~~~~~~~~~---~~d~vi~~a~~   77 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN---EHLKVKKADVSSLDEVCEVCK---GADAVISAFNP   77 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC---TTEEEECCCTTCHHHHHHHHT---TCSEEEECCCC
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc---CceEEEEecCCCHHHHHHHhc---CCCEEEEeCcC
Confidence            457899999999999999999999999999999987653331   578999999999999999887   48999999986


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC----------CCCchhhHHHHH
Q psy14567         92 ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL----------EGHTIYSASKAA  161 (238)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~y~~sK~a  161 (238)
                      ...           ....+++|+.++..+++++.+    .+ .+++|++||.....+.          .+...|+.+|.+
T Consensus        78 ~~~-----------~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~  141 (227)
T 3dhn_A           78 GWN-----------NPDIYDETIKVYLTIIDGVKK----AG-VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKAL  141 (227)
T ss_dssp             -----------------CCSHHHHHHHHHHHHHHH----TT-CSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHH
T ss_pred             CCC-----------ChhHHHHHHHHHHHHHHHHHH----hC-CCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHH
Confidence            421           122578899999888888754    33 4699999998754332          246789999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      .+.+++.++.   ..|++++.+.||.+.++......-........... ....+..++|+|+++..++.+..
T Consensus       142 ~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~i~~~Dva~ai~~~l~~~~  209 (227)
T 3dhn_A          142 GEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYRLGKDDMIVDI-VGNSHISVEDYAAAMIDELEHPK  209 (227)
T ss_dssp             HHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCEEESSBCCCCT-TSCCEEEHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHhh---ccCccEEEEeCCcccCCCccccceeecCCCcccCC-CCCcEEeHHHHHHHHHHHHhCcc
Confidence            9998888765   34899999999999887543211000000000001 11346789999999999987753

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.88  E-value=9.6e-22  Score=163.65  Aligned_cols=205  Identities=14%  Similarity=0.054  Sum_probs=151.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh-H----hHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ-A----NLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~-~----~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      ++++||||+|+||++++++|++.|++|++++|+. .    ..+.+.. .+++.++.+|++|+++++++++.. ++|+|||
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vih   79 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-MPDSCFH   79 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-CCSEEEE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhcc-CCCEEEE
Confidence            4689999999999999999999999999998742 1    1223322 246889999999999999998864 6899999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc--------------------
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT--------------------  147 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------------  147 (238)
                      +||....    +.+.++ ++..+++|+.++..+++++.+...    ++++|++||.....                    
T Consensus        80 ~A~~~~~----~~~~~~-~~~~~~~nv~~~~~l~~a~~~~~~----~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~  150 (347)
T 1orr_A           80 LAGQVAM----TTSIDN-PCMDFEINVGGTLNLLEAVRQYNS----NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKP  150 (347)
T ss_dssp             CCCCCCH----HHHHHC-HHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCT
T ss_pred             CCcccCh----hhhhhC-HHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeccHHHhCCCCcCCcccccccccccccc
Confidence            9997532    122334 778899999999999999987653    36999999976421                    


Q ss_pred             -------cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC---CCccCCcccCC-----CC
Q psy14567        148 -------ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD---PAKAGPMLAKT-----PL  212 (238)
Q Consensus       148 -------~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~-----~~  212 (238)
                             +..+...|+.+|.+.+.+++.++.++   |++++.+.||.+.++........   ..+........     |+
T Consensus       151 ~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (347)
T 1orr_A          151 NGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPF  227 (347)
T ss_dssp             TCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCE
T ss_pred             cCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCe
Confidence                   22356789999999999999998886   79999999999999875321100   00101110110     22


Q ss_pred             C---------CcCCCCCccccccccccc
Q psy14567        213 G---------RFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       213 ~---------r~~~~~~ia~~~~~l~s~  231 (238)
                      .         -+..++|+|+++++++.+
T Consensus       228 ~~~g~g~~~~~~i~v~Dva~a~~~~~~~  255 (347)
T 1orr_A          228 TISGNGKQVRDVLHAEDMISLYFTALAN  255 (347)
T ss_dssp             EEESSSCCEEECEEHHHHHHHHHHHHHT
T ss_pred             EEecCCcceEeeEEHHHHHHHHHHHHhc
Confidence            2         255889999999988864

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.88  E-value=3.3e-22  Score=167.35  Aligned_cols=208  Identities=14%  Similarity=0.086  Sum_probs=151.9

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh---CCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA---FPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      ++++||||+|+||++++++|++.|++|++++|+.+..+.+.+.   .+++.++.+|+++++++.++++.. ++|+|||+|
T Consensus        10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~vih~A   88 (357)
T 1rkx_A           10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-QPEIVFHMA   88 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-CCSEEEECC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-CCCEEEECC
Confidence            4688999999999999999999999999999987654333322   346889999999999999998866 689999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc------------cCCCCchhhH
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT------------ALEGHTIYSA  157 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~y~~  157 (238)
                      |...    .+.+.++ ++..+++|+.++..+++++.+.   ++ .+++|++||.....            +..+...|+.
T Consensus        89 ~~~~----~~~~~~~-~~~~~~~n~~~~~~l~~a~~~~---~~-~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~  159 (357)
T 1rkx_A           89 AQPL----VRLSYSE-PVETYSTNVMGTVYLLEAIRHV---GG-VKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSN  159 (357)
T ss_dssp             SCCC----HHHHHHC-HHHHHHHHTHHHHHHHHHHHHH---CC-CCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHH
T ss_pred             CCcc----cccchhC-HHHHHHHHHHHHHHHHHHHHHh---CC-CCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHH
Confidence            9632    1122344 6788999999999999998763   21 46999999976311            3345678999


Q ss_pred             HHHHHHHHHHHHHHHhC------CCCeEEEEEeCCceecCcccCCCC-CCCccCC--------cccCCCCCCcCCCCCcc
Q psy14567        158 SKAALDSITRTMALELG------PYNIRVNSVQPTVVMTQMGRTGWS-DPAKAGP--------MLAKTPLGRFAGKLKPK  222 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~------~~~i~v~~i~PG~v~t~~~~~~~~-~~~~~~~--------~~~~~~~~r~~~~~~ia  222 (238)
                      +|.+.+.+++.++.++.      +.|++++.+.||.+.++....... ...+...        ........-+...+|+|
T Consensus       160 sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva  239 (357)
T 1rkx_A          160 SKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPL  239 (357)
T ss_dssp             HHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHH
Confidence            99999999999998885      448999999999999875421000 0000000        00111122356778888


Q ss_pred             cccccccc
Q psy14567        223 PWNRWLLP  230 (238)
Q Consensus       223 ~~~~~l~s  230 (238)
                      ++++.++.
T Consensus       240 ~a~~~~~~  247 (357)
T 1rkx_A          240 SGYLLLAQ  247 (357)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88777664

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.88  E-value=5.1e-23  Score=170.80  Aligned_cols=203  Identities=16%  Similarity=0.063  Sum_probs=148.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCC--CEEEEecCChH--hHHHHHhh--CCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQA--NLDSLKQA--FPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      .++||||+|+||++++++|+++|  ++|++++|+..  ..+.+...  .+++.++.+|++|++++++++.   ++|+|||
T Consensus         5 ~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~vih   81 (336)
T 2hun_A            5 KLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVR---KVDGVVH   81 (336)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH---TCSEEEE
T ss_pred             eEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhh---CCCEEEE
Confidence            47899999999999999999986  89999988642  22222211  2468899999999999988884   6899999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCCCchhh
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEGHTIYS  156 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~y~  156 (238)
                      +||....    +.+.++ ++..+++|+.++..+++++.+.   +. .+++|++||.....           +..+...|+
T Consensus        82 ~A~~~~~----~~~~~~-~~~~~~~Nv~g~~~l~~a~~~~---~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~  152 (336)
T 2hun_A           82 LAAESHV----DRSISS-PEIFLHSNVIGTYTLLESIRRE---NP-EVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYS  152 (336)
T ss_dssp             CCCCCCH----HHHHHC-THHHHHHHHHHHHHHHHHHHHH---CT-TSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHH
T ss_pred             CCCCcCh----hhhhhC-HHHHHHHHHHHHHHHHHHHHHh---CC-CcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccH
Confidence            9997532    122334 6778999999999999999876   11 36999999975321           334567999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCC---------cccCCCCCCcCCCCCccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGP---------MLAKTPLGRFAGKLKPKPWNRW  227 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~~r~~~~~~ia~~~~~  227 (238)
                      .+|.+.+.+++.++.++   |++++.+.||.+.++........+.+...         .....+...+..++|+|+++.+
T Consensus       153 ~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  229 (336)
T 2hun_A          153 ATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIEL  229 (336)
T ss_dssp             HHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHH
Confidence            99999999999998875   79999999999999874321000000000         1112234567789999999998


Q ss_pred             cccc
Q psy14567        228 LLPS  231 (238)
Q Consensus       228 l~s~  231 (238)
                      ++++
T Consensus       230 ~~~~  233 (336)
T 2hun_A          230 VLLK  233 (336)
T ss_dssp             HHHH
T ss_pred             HHhC
Confidence            8764

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.88  E-value=1.1e-22  Score=203.07  Aligned_cols=170  Identities=15%  Similarity=0.147  Sum_probs=131.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCE-EEEecCChHh-------HHHHHhhCCCceEEEeecCCHHHHHHHHHh---c
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAI-IIALSKTQAN-------LDSLKQAFPNVQTVQVDLQDWARTRAAVSK---V   79 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~-V~~~~r~~~~-------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~---~   79 (238)
                      ..++++||||++|||+++|++|+++|++ |++++|+..+       .+++.+...++.++.||++|++++++++++   +
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence            5678999999999999999999999996 8888988532       223333344688899999999999888865   4


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      |++|++|||||+....++.+++.++ |++++++|+.+++++.+++.+.+.+   .|+||++||.++..+.++...|+++|
T Consensus      1963 g~id~lVnnAgv~~~~~~~~~t~e~-~~~~~~~nv~g~~~l~~~~~~~~~~---~g~iV~iSS~ag~~g~~g~~~Y~aaK 2038 (2512)
T 2vz8_A         1963 GPVGGVFNLAMVLRDAVLENQTPEF-FQDVSKPKYSGTANLDRVTREACPE---LDYFVIFSSVSCGRGNAGQANYGFAN 2038 (2512)
T ss_dssp             SCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTT---CCEEEEECCHHHHTTCTTCHHHHHHH
T ss_pred             CCCcEEEECCCcCCCCchhhCCHHH-HHHHHHHHHHHHHHHHHHHHHhccc---CCEEEEecchhhcCCCCCcHHHHHHH
Confidence            8999999999998777888888888 9999999999999999999998754   37999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCce
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVV  188 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v  188 (238)
                      +++++|++.++.+    |++..++..|.+
T Consensus      2039 aal~~l~~~rr~~----Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2039 SAMERICEKRRHD----GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHHHT----TSCCCEEEECCB
T ss_pred             HHHHHHHHHHHHC----CCcEEEEEccCc
Confidence            9999999987665    666677777665

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.88  E-value=2.7e-21  Score=164.23  Aligned_cols=175  Identities=11%  Similarity=0.022  Sum_probs=134.6

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHH-----------------HHH----hhCCCceEEEeecC
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLD-----------------SLK----QAFPNVQTVQVDLQ   67 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------------~~~----~~~~~~~~~~~D~~   67 (238)
                      ..++..++||||+|.||++++++|+++|++|++++|+.....                 .+.    ....++.++.+|++
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~   87 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   87 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence            456778899999999999999999999999999988754311                 111    12346889999999


Q ss_pred             CHHHHHHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc
Q psy14567         68 DWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT  147 (238)
Q Consensus        68 ~~~~v~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  147 (238)
                      |++++.++++.. ++|+|||+||....... ..++++ +...+++|+.++..+++++.+.    +...++|++||.....
T Consensus        88 d~~~~~~~~~~~-~~D~Vih~A~~~~~~~~-~~~~~~-~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~~vyg  160 (404)
T 1i24_A           88 DFEFLAESFKSF-EPDSVVHFGEQRSAPYS-MIDRSR-AVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMGEYG  160 (404)
T ss_dssp             SHHHHHHHHHHH-CCSEEEECCSCCCHHHH-TSCHHH-HHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGGGGC
T ss_pred             CHHHHHHHHhcc-CCCEEEECCCCCCccch-hhCccc-hhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCcHHHhC
Confidence            999999998865 58999999997643211 224454 6778999999999999998653    2124999999975421


Q ss_pred             ------------------------cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc
Q psy14567        148 ------------------------ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       148 ------------------------~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~  193 (238)
                                              +..+...|+.+|.+.+.+++.++.++   |++++.+.||.+.++..
T Consensus       161 ~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          161 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             CCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             CCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCC
Confidence                                    23345789999999999999998876   79999999999998854

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.88  E-value=1e-22  Score=169.27  Aligned_cols=196  Identities=11%  Similarity=0.019  Sum_probs=142.7

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      +++||||+|+||++++++|++.|++|++++|+.+..+++..  .++.++.+|++|++++.++++   ++|+|||+||...
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~Dl~d~~~~~~~~~---~~d~vih~a~~~~   89 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY--LEPECRVAEMLDHAGLERALR---GLDGVIFSAGYYP   89 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG--GCCEEEECCTTCHHHHHHHTT---TCSEEEEC-----
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc--CCeEEEEecCCCHHHHHHHHc---CCCEEEECCccCc
Confidence            68999999999999999999999999999998776544432  267889999999999888876   5899999999653


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCC----------------CchhhH
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEG----------------HTIYSA  157 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------------~~~y~~  157 (238)
                            .+.++ ++..+++|+.++..+++++.+.    + .+++|++||.......+.                ...|+.
T Consensus        90 ------~~~~~-~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~  157 (342)
T 2x4g_A           90 ------SRPRR-WQEEVASALGQTNPFYAACLQA----R-VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVL  157 (342)
T ss_dssp             --------------CHHHHHHHHHHHHHHHHHHH----T-CSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHH
T ss_pred             ------CCCCC-HHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHH
Confidence                  12233 6777899999999999999764    2 469999999876443332                678999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc-cCCCCCCCccCCcccCC------CCCCcCCCCCcccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG-RTGWSDPAKAGPMLAKT------PLGRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~-~~~~~~~~~~~~~~~~~------~~~r~~~~~~ia~~~~~l~s  230 (238)
                      +|.+.+.+++.++.   . |++++.+.||.+.++.. ...  ...+........      ....+..++|+|+++.+++.
T Consensus       158 sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  231 (342)
T 2x4g_A          158 CKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPT--TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALE  231 (342)
T ss_dssp             HHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCS--TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCcccc--HHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHh
Confidence            99999999999876   3 79999999999999865 211  111111111111      11226688999999988876


Q ss_pred             cc
Q psy14567        231 SV  232 (238)
Q Consensus       231 ~~  232 (238)
                      +.
T Consensus       232 ~~  233 (342)
T 2x4g_A          232 RG  233 (342)
T ss_dssp             HS
T ss_pred             CC
Confidence            53

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.87  E-value=6.6e-22  Score=164.41  Aligned_cols=169  Identities=14%  Similarity=0.081  Sum_probs=132.4

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHH----HHHhh-CCCceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLD----SLKQA-FPNVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      .++++||||+|+||++++++|+++|++|++++|+.+..+    ++... ..++.++.+|++|++++++++++ +++|++|
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~~~d~vi   83 (341)
T 3enk_A            5 KGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-HPITAAI   83 (341)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-SCCCEEE
T ss_pred             CcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-cCCcEEE
Confidence            357899999999999999999999999999999765432    22222 34688999999999999999987 3699999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCCCchh
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEGHTIY  155 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~y  155 (238)
                      |+||......    ..++ ....+++|+.++..+++++.    +.+ .+++|++||.....           +..+...|
T Consensus        84 h~A~~~~~~~----~~~~-~~~~~~~n~~~~~~l~~~~~----~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y  153 (341)
T 3enk_A           84 HFAALKAVGE----SVAK-PIEYYRNNLDSLLSLLRVMR----ERA-VKRIVFSSSATVYGVPERSPIDETFPLSATNPY  153 (341)
T ss_dssp             ECCCCCCHHH----HHHC-HHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHH
T ss_pred             ECccccccCc----cccC-hHHHHHHHHHHHHHHHHHHH----hCC-CCEEEEEecceEecCCCCCCCCCCCCCCCCChh
Confidence            9999764321    1222 45678899999988877654    333 57999999966531           22345799


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~  193 (238)
                      +.+|.+.+.+++.++.++.  +++++.+.|+.+..+..
T Consensus       154 ~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~  189 (341)
T 3enk_A          154 GQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHE  189 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCT
T ss_pred             HHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCcc
Confidence            9999999999999998864  58999999999988753

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.87  E-value=1.5e-22  Score=169.23  Aligned_cols=205  Identities=14%  Similarity=0.096  Sum_probs=152.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH----hHHHHHhhC-----CCceEEEeecCCHHHHHHHHHhcCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA----NLDSLKQAF-----PNVQTVQVDLQDWARTRAAVSKVGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~g~   81 (238)
                      ++++++||||+|+||++++++|++.|++|++++|+..    .++++.+..     +++.++.+|++|.+++.++++   +
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~  102 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---G  102 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---T
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---C
Confidence            3457899999999999999999999999999998753    444444332     468899999999999988887   6


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-----------C
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-----------E  150 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~  150 (238)
                      +|+|||+||.....    .+.++ ++..+++|+.++..+++++.+.    + .+++|++||.......           .
T Consensus       103 ~d~vih~A~~~~~~----~~~~~-~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~~E~~~~~  172 (352)
T 1sb8_A          103 VDYVLHQAALGSVP----RSIND-PITSNATNIDGFLNMLIAARDA----K-VQSFTYAASSSTYGDHPGLPKVEDTIGK  172 (352)
T ss_dssp             CSEEEECCSCCCHH----HHHHC-HHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCSSBCTTCCCC
T ss_pred             CCEEEECCcccCch----hhhhC-HHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEeccHHhcCCCCCCCCCCCCCCC
Confidence            89999999975321    12234 7788999999999999998652    3 4699999998764322           2


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC----CCccCCcccC---------CCCCCcCC
Q psy14567        151 GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD----PAKAGPMLAK---------TPLGRFAG  217 (238)
Q Consensus       151 ~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~----~~~~~~~~~~---------~~~~r~~~  217 (238)
                      +...|+.+|.+.+.+++.++.++   |++++.+.||.+.++........    +.+.......         .....+..
T Consensus       173 ~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  249 (352)
T 1sb8_A          173 PLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCY  249 (352)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEE
Confidence            46799999999999999998876   79999999999999875321000    0011111111         11234677


Q ss_pred             CCCccccccccccc
Q psy14567        218 KLKPKPWNRWLLPS  231 (238)
Q Consensus       218 ~~~ia~~~~~l~s~  231 (238)
                      ++|+|+++.+++.+
T Consensus       250 v~Dva~a~~~~~~~  263 (352)
T 1sb8_A          250 IENTVQANLLAATA  263 (352)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhc
Confidence            88999988887764

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.87  E-value=2e-23  Score=172.84  Aligned_cols=214  Identities=12%  Similarity=-0.035  Sum_probs=155.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHh-hCCCEEEEecCChHh----------------HHHHHhhCCCceEEEeecCCHHHH
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLS-QHEAIIIALSKTQAN----------------LDSLKQAFPNVQTVQVDLQDWART   72 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~-~~G~~V~~~~r~~~~----------------~~~~~~~~~~~~~~~~D~~~~~~v   72 (238)
                      ...++++|||||+|||++++..|+ ..|+.++++++..+.                .+.+.+.......++||+++++++
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i  127 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIK  127 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHH
Confidence            346788999999999999999998 689999888765421                245666677899999999999999


Q ss_pred             HHHHHhc----CCccEEEEccCCCCC-------------CCCC--------C-------------CChHH--HHHHHHHH
Q psy14567         73 RAAVSKV----GPVDVLINNAAVARF-------------DRFL--------D-------------IDEEN--LIDSIFDV  112 (238)
Q Consensus        73 ~~~~~~~----g~id~li~~ag~~~~-------------~~~~--------~-------------~~~~~--~~~~~~~~  112 (238)
                      +++++++    |++|+||||++....             +++.        +             .+.++  .+...|..
T Consensus       128 ~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~  207 (401)
T 4ggo_A          128 AQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGG  207 (401)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhh
Confidence            8888654    899999999997521             1110        0             11222  14455566


Q ss_pred             HHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCC--CCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceec
Q psy14567        113 NIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALE--GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT  190 (238)
Q Consensus       113 n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~--~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t  190 (238)
                      ..++.+...+...+.|.+   +++++.+|++.+....|  +...++.+|++|+..++.|+.++++  +++|.+.||.+.|
T Consensus       208 s~~s~w~~al~~a~lla~---G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~vT  282 (401)
T 4ggo_A          208 EDWERWIKQLSKEGLLEE---GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGLVT  282 (401)
T ss_dssp             HHHHHHHHHHHHTTCEEE---EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCCCC
T ss_pred             hHHHHHHHHHHhhhcccC---CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCcccc
Confidence            777788888887777754   57999999998876555  3458999999999999999999985  8999999999999


Q ss_pred             CcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccc
Q psy14567        191 QMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s  230 (238)
                      .....+...+-....+. + .|++.++.|.+.+.+..|..
T Consensus       283 ~AssaIP~~ply~~~l~-k-vmk~~g~heg~ieq~~rl~~  320 (401)
T 4ggo_A          283 RASAVIPVIPLYLASLF-K-VMKEKGNHEGCIEQITRLYA  320 (401)
T ss_dssp             TTGGGSSSHHHHHHHHH-H-HHHHHTCCCCHHHHHHHHHH
T ss_pred             chhhcCCCchHHHHHHH-H-HHHhcCCCCchHHHHHHHHH
Confidence            87655432221111100 0 24556666666666665554

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.87  E-value=2.5e-22  Score=166.85  Aligned_cols=204  Identities=17%  Similarity=0.163  Sum_probs=146.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh--hCC----CceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ--AFP----NVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~----~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      .++++||||+|+||++++++|+++|++|+++.|+.+..++...  ..+    ++.++.+|++|+++++++++   .+|+|
T Consensus         5 ~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~V   81 (337)
T 2c29_D            5 SETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK---GCTGV   81 (337)
T ss_dssp             -CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT---TCSEE
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc---CCCEE
Confidence            4568999999999999999999999999999998764332221  121    47789999999998888876   47999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC----------------
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL----------------  149 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------  149 (238)
                      ||+|+...   ....++   .+..+++|+.++..+++++.+..   . .+++|++||..+..+.                
T Consensus        82 ih~A~~~~---~~~~~~---~~~~~~~nv~gt~~ll~a~~~~~---~-~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~  151 (337)
T 2c29_D           82 FHVATPMD---FESKDP---ENEVIKPTIEGMLGIMKSCAAAK---T-VRRLVFTSSAGTVNIQEHQLPVYDESCWSDME  151 (337)
T ss_dssp             EECCCCCC---SSCSSH---HHHTHHHHHHHHHHHHHHHHHHS---C-CCEEEEECCGGGTSCSSSCCSEECTTCCCCHH
T ss_pred             EEeccccC---CCCCCh---HHHHHHHHHHHHHHHHHHHHhCC---C-ccEEEEeeeHhhcccCCCCCcccCcccCCchh
Confidence            99998542   111222   35578999999999999987643   1 3699999998743221                


Q ss_pred             ------CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC--Cc----cC--CcccCCCCCCc
Q psy14567        150 ------EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP--AK----AG--PMLAKTPLGRF  215 (238)
Q Consensus       150 ------~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~--~~----~~--~~~~~~~~~r~  215 (238)
                            ++...|+.||.+.+.+++.++.+.   |++++.+.||.+.++.........  ..    ..  ......+..++
T Consensus       152 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  228 (337)
T 2c29_D          152 FCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---NIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQF  228 (337)
T ss_dssp             HHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEE
T ss_pred             hhcccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCE
Confidence                  123369999999999998876553   799999999999998753321100  00    00  00111134568


Q ss_pred             CCCCCccccccccccc
Q psy14567        216 AGKLKPKPWNRWLLPS  231 (238)
Q Consensus       216 ~~~~~ia~~~~~l~s~  231 (238)
                      ..++|+|+++++++.+
T Consensus       229 i~v~Dva~a~~~~~~~  244 (337)
T 2c29_D          229 VHLDDLCNAHIYLFEN  244 (337)
T ss_dssp             EEHHHHHHHHHHHHHC
T ss_pred             EEHHHHHHHHHHHhcC
Confidence            8999999999988765

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.87  E-value=6.3e-21  Score=161.71  Aligned_cols=166  Identities=15%  Similarity=0.094  Sum_probs=132.5

Q ss_pred             CCCCCCCCCchHHHHHHHHh-hCCCEEEEecCChHh---------HHHHH---hhC------CC---ceEEEeecCCHHH
Q psy14567         14 TKGGDYPKPGIGRCIVEKLS-QHEAIIIALSKTQAN---------LDSLK---QAF------PN---VQTVQVDLQDWAR   71 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~-~~G~~V~~~~r~~~~---------~~~~~---~~~------~~---~~~~~~D~~~~~~   71 (238)
                      +++||||+|+||++++++|+ +.|++|++++|+...         .+.+.   +..      .+   +.++.+|++|+++
T Consensus         4 ~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   83 (397)
T 1gy8_A            4 RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDF   83 (397)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHH
Confidence            57899999999999999999 999999999987543         33332   111      24   7899999999999


Q ss_pred             HHHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC--
Q psy14567         72 TRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL--  149 (238)
Q Consensus        72 v~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  149 (238)
                      +.+++++++++|+|||+||......    +.++ ++..+++|+.++..+++++..    .+ .+++|++||.......  
T Consensus        84 ~~~~~~~~~~~d~vih~A~~~~~~~----~~~~-~~~~~~~Nv~g~~~ll~a~~~----~~-~~~iv~~SS~~v~g~~~~  153 (397)
T 1gy8_A           84 LNGVFTRHGPIDAVVHMCAFLAVGE----SVRD-PLKYYDNNVVGILRLLQAMLL----HK-CDKIIFSSSAAIFGNPTM  153 (397)
T ss_dssp             HHHHHHHSCCCCEEEECCCCCCHHH----HHHC-HHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGTBSCCC
T ss_pred             HHHHHHhcCCCCEEEECCCccCcCc----chhh-HHHHHHHHhHHHHHHHHHHHH----hC-CCEEEEECCHHHhCCCCc
Confidence            9999988877999999999764221    2334 778899999999999998743    33 4699999996543211  


Q ss_pred             ----------------CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        150 ----------------EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       150 ----------------~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                                      .+...|+.+|.+.+.+++.++.++   |++++.+.||.+..+.
T Consensus       154 ~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          154 GSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             -----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             ccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence                            125789999999999999999887   7999999999998775

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.86  E-value=2.3e-21  Score=149.72  Aligned_cols=185  Identities=12%  Similarity=0.008  Sum_probs=138.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      ++++||||+|+||++++++|+++|++|++++|+.++.+...  .+++.++.+|++|++++.++++   .+|++||++|..
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~---~~d~vi~~a~~~   78 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG--PRPAHVVVGDVLQAADVDKTVA---GQDAVIVLLGTR   78 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS--CCCSEEEESCTTSHHHHHHHHT---TCSEEEECCCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc--CCceEEEEecCCCHHHHHHHHc---CCCEEEECccCC
Confidence            46889999999999999999999999999999987643221  3468899999999999988887   479999999976


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCC----CCchhhHHHHHHHHHHHH
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALE----GHTIYSASKAALDSITRT  168 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----~~~~y~~sK~al~~l~~~  168 (238)
                      ...     +.       .++|+.++..+++++.+    .+ .+++|++||.......+    +...|+.+|.+++.+++.
T Consensus        79 ~~~-----~~-------~~~n~~~~~~~~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~  141 (206)
T 1hdo_A           79 NDL-----SP-------TTVMSEGARNIVAAMKA----HG-VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRE  141 (206)
T ss_dssp             TCC-----SC-------CCHHHHHHHHHHHHHHH----HT-CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHH
T ss_pred             CCC-----Cc-------cchHHHHHHHHHHHHHH----hC-CCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHh
Confidence            431     11       13777788777777654    23 46999999987654333    457899999999998843


Q ss_pred             HHHHhCCCCeEEEEEeCCcee-cCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        169 MALELGPYNIRVNSVQPTVVM-TQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       169 l~~~~~~~~i~v~~i~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                             .+++++.+.||.+. ++....      +.... ...|.+++.+++|+|+++.+++.+..
T Consensus       142 -------~~i~~~~lrp~~~~~~~~~~~------~~~~~-~~~~~~~~i~~~Dva~~~~~~~~~~~  193 (206)
T 1hdo_A          142 -------SGLKYVAVMPPHIGDQPLTGA------YTVTL-DGRGPSRVISKHDLGHFMLRCLTTDE  193 (206)
T ss_dssp             -------TCSEEEEECCSEEECCCCCSC------CEEES-SSCSSCSEEEHHHHHHHHHHTTSCST
T ss_pred             -------CCCCEEEEeCCcccCCCCCcc------eEecc-cCCCCCCccCHHHHHHHHHHHhcCcc
Confidence                   47999999999983 332211      11111 12232578899999999999998753

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.86  E-value=2.5e-22  Score=165.07  Aligned_cols=201  Identities=17%  Similarity=0.071  Sum_probs=146.2

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-HHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-LDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      .++||||+|+||++++++|+++|++|++++|..+. .+.+   ..++.++.+|++|++++++++++. ++|++||+||..
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~-~~d~vi~~a~~~   77 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENV---PKGVPFFRVDLRDKEGVERAFREF-RPTHVSHQAAQA   77 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGS---CTTCCEECCCTTCHHHHHHHHHHH-CCSEEEECCSCC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhc---ccCeEEEECCCCCHHHHHHHHHhc-CCCEEEECcccc
Confidence            36899999999999999999999999999985432 1111   135778999999999999988764 589999999965


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-------------cCCCCchhhHHH
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-------------ALEGHTIYSASK  159 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------~~~~~~~y~~sK  159 (238)
                      ..    ..+.++ +...+++|+.++..+++++.+    .+ .+++|++||..+..             +..+...|+.+|
T Consensus        78 ~~----~~~~~~-~~~~~~~N~~g~~~l~~a~~~----~~-~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK  147 (311)
T 2p5y_A           78 SV----KVSVED-PVLDFEVNLLGGLNLLEACRQ----YG-VEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASK  147 (311)
T ss_dssp             CH----HHHHHC-HHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHH
T ss_pred             Cc----hhhhhC-HHHHHHHHHHHHHHHHHHHHH----hC-CCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHH
Confidence            32    122344 678899999999999998853    23 46999999972211             112467899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC---CCccC------C---c-----ccCCCCCCcCCCCCcc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD---PAKAG------P---M-----LAKTPLGRFAGKLKPK  222 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~---~~~~~------~---~-----~~~~~~~r~~~~~~ia  222 (238)
                      .+.+.+++.++.++   |++++.+.||.+.++........   +.+..      .   .     ....+...+..++|+|
T Consensus       148 ~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  224 (311)
T 2p5y_A          148 AAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVA  224 (311)
T ss_dssp             HHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHH
T ss_pred             HHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHH
Confidence            99999999998875   79999999999999864321100   00000      0   0     1112334567789999


Q ss_pred             ccccccccc
Q psy14567        223 PWNRWLLPS  231 (238)
Q Consensus       223 ~~~~~l~s~  231 (238)
                      +++.+++.+
T Consensus       225 ~a~~~~~~~  233 (311)
T 2p5y_A          225 EAHALALFS  233 (311)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhC
Confidence            998888754

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.86  E-value=1.1e-21  Score=165.69  Aligned_cols=210  Identities=15%  Similarity=0.004  Sum_probs=146.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-----HHHHHhh----CC-CceEEEeecCCHHHHHHHHHhcCCc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-----LDSLKQA----FP-NVQTVQVDLQDWARTRAAVSKVGPV   82 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~----~~-~~~~~~~D~~~~~~v~~~~~~~g~i   82 (238)
                      ++++||||+|+||.+++++|++.|++|++++|+.+.     ++.+...    .+ ++.++.+|++|.+++.++++.+ ++
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~  107 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-KP  107 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH-CC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc-CC
Confidence            578999999999999999999999999999998653     2222111    12 6788999999999999998876 68


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc----------cCCCC
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT----------ALEGH  152 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------~~~~~  152 (238)
                      |+|||+||.....    .+.++ ++..+++|+.++..+++++.+...+++..+++|++||.....          +..+.
T Consensus       108 d~Vih~A~~~~~~----~~~~~-~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~  182 (381)
T 1n7h_A          108 DEVYNLAAQSHVA----VSFEI-PDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPR  182 (381)
T ss_dssp             SEEEECCSCCCHH----HHHHS-HHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCC
T ss_pred             CEEEECCcccCcc----ccccC-HHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCC
Confidence            9999999975421    22344 778899999999999999999876543356999999976432          23456


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEE------EEEeCCceecCcc---cCC----CCCCCccCCcccCCCCCCcCCCC
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRV------NSVQPTVVMTQMG---RTG----WSDPAKAGPMLAKTPLGRFAGKL  219 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v------~~i~PG~v~t~~~---~~~----~~~~~~~~~~~~~~~~~r~~~~~  219 (238)
                      ..|+.+|.+.+.+++.++.+++   +.+      +.+.||...+...   ...    ..............+...+..++
T Consensus       183 ~~Y~~sK~~~E~~~~~~~~~~~---~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~  259 (381)
T 1n7h_A          183 SPYAASKCAAHWYTVNYREAYG---LFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAG  259 (381)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHC---CEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHH
T ss_pred             CchHHHHHHHHHHHHHHHHHhC---CcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHH
Confidence            7999999999999999988764   333      3334443221100   000    00000000011122345578899


Q ss_pred             Cccccccccccc
Q psy14567        220 KPKPWNRWLLPS  231 (238)
Q Consensus       220 ~ia~~~~~l~s~  231 (238)
                      |+|+++.+++.+
T Consensus       260 Dva~a~~~~~~~  271 (381)
T 1n7h_A          260 DYVEAMWLMLQQ  271 (381)
T ss_dssp             HHHHHHHHHHTS
T ss_pred             HHHHHHHHHHhC
Confidence            999999888765

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.86  E-value=5.5e-23  Score=168.93  Aligned_cols=198  Identities=18%  Similarity=0.114  Sum_probs=145.4

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      .++||||+|+||++++++|+++|++|++++|+.+...+..  ..++.++.+|++|.+ +.++++   . |+|||+||...
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~~Dl~d~~-~~~~~~---~-d~vih~A~~~~   74 (312)
T 3ko8_A            2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--NPSAELHVRDLKDYS-WGAGIK---G-DVVFHFAANPE   74 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--CTTSEEECCCTTSTT-TTTTCC---C-SEEEECCSSCS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--CCCceEEECccccHH-HHhhcC---C-CEEEECCCCCC
Confidence            4789999999999999999999999999999876533222  346889999999987 555544   3 99999999543


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCCCchhhHHHHHH
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEGHTIYSASKAAL  162 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~y~~sK~al  162 (238)
                      .    +.+.++ +...+++|+.++..+++++..    .+ .+++|++||.....           +..+...|+.+|.+.
T Consensus        75 ~----~~~~~~-~~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~  144 (312)
T 3ko8_A           75 V----RLSTTE-PIVHFNENVVATFNVLEWARQ----TG-VRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAG  144 (312)
T ss_dssp             S----SGGGSC-HHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHH
T ss_pred             c----hhhhhC-HHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHH
Confidence            2    223344 677889999999999998853    23 46999999976532           234568999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC---------CCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS---------DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +.+++.++.++   |++++.+.||.+.++.......         ................+..++|+|+++.+++.+
T Consensus       145 e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  219 (312)
T 3ko8_A          145 EVMCATYARLF---GVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKK  219 (312)
T ss_dssp             HHHHHHHHHHH---CCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHh---CCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHh
Confidence            99999999887   7999999999999986432100         000000111122334566799999999988775

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.86  E-value=3.5e-22  Score=164.31  Aligned_cols=200  Identities=17%  Similarity=0.120  Sum_probs=143.7

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      |++++||||+|+||++++++|+++|..|++..|+....+.+   ...+.++.+|+++ +++.++++   ++|++||+|+.
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~---~~~~~~~~~Dl~~-~~~~~~~~---~~d~vih~a~~   73 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV---NEAARLVKADLAA-DDIKDYLK---GAEEVWHIAAN   73 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS---CTTEEEECCCTTT-SCCHHHHT---TCSEEEECCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc---CCCcEEEECcCCh-HHHHHHhc---CCCEEEECCCC
Confidence            35789999999999999999999996555555554332222   3468889999999 88888877   68999999985


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-----------ccCCCCchhhHHHH
Q psy14567         92 ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-----------TALEGHTIYSASKA  160 (238)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~~~y~~sK~  160 (238)
                      ...    +.+.++ ++..+++|+.++..+++++..    .+ .+++|++||....           .+..+...|+.+|.
T Consensus        74 ~~~----~~~~~~-~~~~~~~nv~~~~~l~~~~~~----~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~  143 (313)
T 3ehe_A           74 PDV----RIGAEN-PDEIYRNNVLATYRLLEAMRK----AG-VSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKL  143 (313)
T ss_dssp             CCC----C-CCCC-HHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred             CCh----hhhhhC-HHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHH
Confidence            422    223334 778899999999999988643    33 4699999997653           23445678999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC---------CCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW---------SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +.+.+++.++.++   |++++.+.|+.+.++......         .................+...+|+|+++.+++..
T Consensus       144 ~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~  220 (313)
T 3ehe_A          144 ACEALIESYCHTF---DMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRG  220 (313)
T ss_dssp             HHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhcc
Confidence            9999999999886   799999999999987533110         0000000111222334567788999999988873

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.86  E-value=2.8e-22  Score=167.16  Aligned_cols=203  Identities=14%  Similarity=0.048  Sum_probs=148.9

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhC--CCEEEEecCChH--hHHHHHhh-CCCceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQH--EAIIIALSKTQA--NLDSLKQA-FPNVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~--G~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      +++++||||+|+||++++++|++.  |++|++++|+..  ..+.+... .+++.++.+|++|++++.++++.   .|+||
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~d~vi   80 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAK---ADAIV   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTT---CSEEE
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhc---CCEEE
Confidence            467899999999999999999998  899999998642  11112111 14688999999999999988874   59999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-------------------
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-------------------  147 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------------  147 (238)
                      |+||....    +.+.++ ++..+++|+.++..+++++.+.    +  +++|++||.....                   
T Consensus        81 h~A~~~~~----~~~~~~-~~~~~~~Nv~g~~~l~~a~~~~----~--~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~  149 (348)
T 1oc2_A           81 HYAAESHN----DNSLND-PSPFIHTNFIGTYTLLEAARKY----D--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKF  149 (348)
T ss_dssp             ECCSCCCH----HHHHHC-CHHHHHHHTHHHHHHHHHHHHH----T--CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSB
T ss_pred             ECCcccCc----cchhhC-HHHHHHHHHHHHHHHHHHHHHh----C--CeEEEecccceeCCCcccccccccccccCCCc
Confidence            99997532    112233 6778899999999999999764    2  4999999975321                   


Q ss_pred             ----cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCC---------cccCCCCCC
Q psy14567        148 ----ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGP---------MLAKTPLGR  214 (238)
Q Consensus       148 ----~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~~r  214 (238)
                          +..+...|+.+|.+.+.+++.++.++   |++++.+.||.+.++........+.+...         .....+...
T Consensus       150 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (348)
T 1oc2_A          150 TAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRD  226 (348)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEE
T ss_pred             CCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEe
Confidence                23456799999999999999998876   79999999999999875311000000000         011223446


Q ss_pred             cCCCCCccccccccccc
Q psy14567        215 FAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       215 ~~~~~~ia~~~~~l~s~  231 (238)
                      +..++|+|+++.+++++
T Consensus       227 ~i~v~Dva~~~~~~~~~  243 (348)
T 1oc2_A          227 WIHTNDHSTGVWAILTK  243 (348)
T ss_dssp             CEEHHHHHHHHHHHHHH
T ss_pred             eEEHHHHHHHHHHHhhC
Confidence            77899999999888764

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.85  E-value=4.7e-21  Score=150.07  Aligned_cols=187  Identities=10%  Similarity=0.005  Sum_probs=133.0

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARF   94 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~   94 (238)
                      ++||||||+||++++++|+++|++|++++|+.++.+++..  .++.++.+|++|+++     +.++++|+|||+||....
T Consensus         3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~--~~~~~~~~D~~d~~~-----~~~~~~d~vi~~ag~~~~   75 (224)
T 3h2s_A            3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG--ATVATLVKEPLVLTE-----ADLDSVDAVVDALSVPWG   75 (224)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC--TTSEEEECCGGGCCH-----HHHTTCSEEEECCCCCTT
T ss_pred             EEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccC--CCceEEecccccccH-----hhcccCCEEEECCccCCC
Confidence            7899999999999999999999999999999988776643  478999999999887     334578999999998621


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCC--------------CchhhHHHH
Q psy14567         95 DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEG--------------HTIYSASKA  160 (238)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------------~~~y~~sK~  160 (238)
                      .     ..       .++|+.++..++++    +.+.+  +++|++||..+..+.+.              ...|+.+|.
T Consensus        76 ~-----~~-------~~~n~~~~~~l~~a----~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~  137 (224)
T 3h2s_A           76 S-----GR-------GYLHLDFATHLVSL----LRNSD--TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALY  137 (224)
T ss_dssp             S-----SC-------THHHHHHHHHHHHT----CTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHH
T ss_pred             c-----ch-------hhHHHHHHHHHHHH----HHHcC--CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHH
Confidence            1     01       24566666554444    44443  79999999876443322              678999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.+.+ +   ......|++++.+.||.+.++.....+  ......+........+..++|+|++++.++.+.
T Consensus       138 ~~e~~-~---~~~~~~~i~~~ivrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~  203 (224)
T 3h2s_A          138 QYYEY-Q---FLQMNANVNWIGISPSEAFPSGPATSY--VAGKDTLLVGEDGQSHITTGNMALAILDQLEHP  203 (224)
T ss_dssp             HHHHH-H---HHTTCTTSCEEEEEECSBCCCCCCCCE--EEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSC
T ss_pred             HHHHH-H---HHHhcCCCcEEEEcCccccCCCcccCc--eecccccccCCCCCceEeHHHHHHHHHHHhcCc
Confidence            98854 2   222456899999999999987322110  000011111112345789999999999998775

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.85  E-value=4.9e-22  Score=167.67  Aligned_cols=167  Identities=11%  Similarity=-0.001  Sum_probs=129.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      ++++++||||+|+||++++++|++.| ++|++++|+.+...+.....+++.++.+|++|++++.++++   ++|+|||+|
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~---~~d~Vih~A  107 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQD---EYDYVFHLA  107 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCS---CCSEEEECC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhh---CCCEEEECC
Confidence            34568999999999999999999999 99999999865421111113468899999999998877765   689999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEcccccc-------------c---cC-CC
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH-KIQGSIVNVSSIAGK-------------T---AL-EG  151 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~g~iv~isS~~~~-------------~---~~-~~  151 (238)
                      |.....    ...++ ++..+++|+.++..+++++.    +. + .+++|++||....             .   +. .+
T Consensus       108 ~~~~~~----~~~~~-~~~~~~~nv~~~~~ll~a~~----~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~  177 (377)
T 2q1s_A          108 TYHGNQ----SSIHD-PLADHENNTLTTLKLYERLK----HFKR-LKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNN  177 (377)
T ss_dssp             CCSCHH----HHHHC-HHHHHHHHTHHHHHHHHHHT----TCSS-CCEEEEEEEC--------------CCCCCCCSSCC
T ss_pred             CccCch----hhhhC-HHHHHHHHHHHHHHHHHHHH----HhCC-CCeEEEeCCHHHcCCCCCCCcCcccccccccccCC
Confidence            975321    12233 67788999999999998874    23 3 4699999996531             1   22 45


Q ss_pred             CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc
Q psy14567        152 HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       152 ~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~  193 (238)
                      ...|+.+|.+.+.+++.++.++   |++++.+.||.+.++..
T Consensus       178 ~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          178 DSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred             CCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence            6789999999999999998776   79999999999998864

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.85  E-value=7.4e-22  Score=169.25  Aligned_cols=202  Identities=11%  Similarity=0.026  Sum_probs=143.6

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh---HHHHHh-------------hCCCceEEEeecCCHHHH
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN---LDSLKQ-------------AFPNVQTVQVDLQDWART   72 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~-------------~~~~~~~~~~D~~~~~~v   72 (238)
                      ...+++++||||+|+||++++++|++.|++|++++|+.+.   .+.+.+             ...++.++.+|+++++++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            4456689999999999999999999999999999998762   222211             125789999999998877


Q ss_pred             HHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc------
Q psy14567         73 RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK------  146 (238)
Q Consensus        73 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~------  146 (238)
                      .    ..+++|+||||||....       .++ ++..+++|+.++..+++++.+     + ..++|++||....      
T Consensus       146 ~----~~~~~d~Vih~A~~~~~-------~~~-~~~~~~~Nv~g~~~l~~aa~~-----~-~~~~v~~SS~~~G~~~~~~  207 (427)
T 4f6c_A          146 V----LPENMDTIIHAGARTDH-------FGD-DDEFEKVNVQGTVDVIRLAQQ-----H-HARLIYVSTISVGTYFDID  207 (427)
T ss_dssp             C----CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH-----T-TCEEEEEEEGGGGSEECSS
T ss_pred             C----CcCCCCEEEECCcccCC-------CCC-HHHHHHHHHHHHHHHHHHHHh-----c-CCcEEEECchHhCCCccCC
Confidence            7    56789999999997632       123 677889999999999999876     2 4699999998760      


Q ss_pred             ------------ccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC-------CccCCcc
Q psy14567        147 ------------TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP-------AKAGPML  207 (238)
Q Consensus       147 ------------~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~-------~~~~~~~  207 (238)
                                  .+..+...|+.+|.+.+.+++.++.    .|++++.+.||.+.++.....+...       .+.....
T Consensus       208 ~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~  283 (427)
T 4f6c_A          208 TEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLL  283 (427)
T ss_dssp             CSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHH
T ss_pred             CCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHH
Confidence                        0122678999999999999998764    4899999999999988754322111       1111111


Q ss_pred             cCC--------CCCCcCCCCCcccccccccccc
Q psy14567        208 AKT--------PLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       208 ~~~--------~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ...        ...-+...+|+|+++++++.+.
T Consensus       284 ~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~  316 (427)
T 4f6c_A          284 QLDCIGVSMAEMPVDFSFVDTTARQIVALAQVN  316 (427)
T ss_dssp             HSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSC
T ss_pred             hcCCCCCccccceEEEeeHHHHHHHHHHHHcCC
Confidence            111        1223567789999998887654

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.85  E-value=5.2e-20  Score=153.38  Aligned_cols=167  Identities=14%  Similarity=0.106  Sum_probs=131.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh----------HhHHHHHh-hCCCceEEEeecCCHHHHHHHHHhcCC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ----------ANLDSLKQ-AFPNVQTVQVDLQDWARTRAAVSKVGP   81 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~----------~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~g~   81 (238)
                      ++++||||+|+||++++++|++.|++|++++|+.          +.++++.+ ...++.++.+|++|++++++++++. +
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~   81 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-S   81 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-C
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-C
Confidence            4688999999999999999999999999998743          23444433 2346889999999999999998865 6


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCC
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALE  150 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~  150 (238)
                      +|+|||+||......    ..++ ++..+++|+.++..+++++..    .+ .+++|++||.....           +..
T Consensus        82 ~d~vih~A~~~~~~~----~~~~-~~~~~~~n~~~~~~l~~~~~~----~~-~~~iv~~SS~~~~g~~~~~~~~E~~~~~  151 (348)
T 1ek6_A           82 FMAVIHFAGLKAVGE----SVQK-PLDYYRVNLTGTIQLLEIMKA----HG-VKNLVFSSSATVYGNPQYLPLDEAHPTG  151 (348)
T ss_dssp             EEEEEECCSCCCHHH----HHHC-HHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             CCEEEECCCCcCccc----hhhc-hHHHHHHHHHHHHHHHHHHHH----hC-CCEEEEECcHHHhCCCCCCCcCCCCCCC
Confidence            999999999753211    2233 678889999999999987643    33 46999999976532           111


Q ss_pred             C-CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        151 G-HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       151 ~-~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      + ...|+.+|.+.+.+++.++.+  ..++++..+.|+.+..+.
T Consensus       152 p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~  192 (348)
T 1ek6_A          152 GCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAH  192 (348)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCC
T ss_pred             CCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCC
Confidence            2 678999999999999999887  346999999999998763

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.84  E-value=3e-21  Score=155.38  Aligned_cols=151  Identities=18%  Similarity=0.141  Sum_probs=123.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      ++++||||+|+||++++++|++.|++|++++|+.+..     ...++.++.+|++|++++.++++   ++|+|||+||..
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~---~~d~vi~~a~~~   74 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA-----AEAHEEIVACDLADAQAVHDLVK---DCDGIIHLGGVS   74 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC-----CCTTEEECCCCTTCHHHHHHHHT---TCSEEEECCSCC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc-----cCCCccEEEccCCCHHHHHHHHc---CCCEEEECCcCC
Confidence            4689999999999999999999999999999987531     11357888999999999988887   489999999975


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCC------------CCchhhHHHH
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALE------------GHTIYSASKA  160 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~y~~sK~  160 (238)
                      .        .++ ++..+++|+.++..+++++.+    .+ .+++|++||.......+            +...|+.+|.
T Consensus        75 ~--------~~~-~~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~  140 (267)
T 3ay3_A           75 V--------ERP-WNDILQANIIGAYNLYEAARN----LG-KPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKC  140 (267)
T ss_dssp             S--------CCC-HHHHHHHTHHHHHHHHHHHHH----TT-CCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHH
T ss_pred             C--------CCC-HHHHHHHHHHHHHHHHHHHHH----hC-CCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHH
Confidence            2        122 677889999999999998864    23 47999999986543222            3579999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCce
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVV  188 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v  188 (238)
                      +.+.+++.++.+   .|++++.+.||.+
T Consensus       141 ~~e~~~~~~~~~---~gi~~~~lrp~~v  165 (267)
T 3ay3_A          141 FGEDLASLYYHK---FDIETLNIRIGSC  165 (267)
T ss_dssp             HHHHHHHHHHHT---TCCCEEEEEECBC
T ss_pred             HHHHHHHHHHHH---cCCCEEEEeceee
Confidence            999999987643   4899999999998

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.84  E-value=6.5e-21  Score=159.08  Aligned_cols=205  Identities=16%  Similarity=0.107  Sum_probs=149.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH----hHHHHHhhC-----CCceEEEeecCCHHHHHHHHHhcCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA----NLDSLKQAF-----PNVQTVQVDLQDWARTRAAVSKVGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~g~   81 (238)
                      +.++++||||+|+||++++++|++.|++|++++|+..    ..+.+....     +++.++.+|++|++++.++++   +
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~  100 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK---G  100 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT---T
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc---C
Confidence            3567899999999999999999999999999999643    344443322     578999999999999888887   6


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-----------C
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-----------E  150 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~  150 (238)
                      +|+|||+||.....    ...++ ....+++|+.++..+++++.+.    + .+++|++||.......           .
T Consensus       101 ~d~Vih~A~~~~~~----~~~~~-~~~~~~~nv~~~~~ll~a~~~~----~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~  170 (351)
T 3ruf_A          101 VDHVLHQAALGSVP----RSIVD-PITTNATNITGFLNILHAAKNA----Q-VQSFTYAASSSTYGDHPALPKVEENIGN  170 (351)
T ss_dssp             CSEEEECCCCCCHH----HHHHC-HHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCSSBCTTCCCC
T ss_pred             CCEEEECCccCCcc----hhhhC-HHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEEecHHhcCCCCCCCCccCCCCC
Confidence            89999999975321    12233 6778899999999999988542    3 4699999997653221           2


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC----CCccCCccc---------CCCCCCcCC
Q psy14567        151 GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD----PAKAGPMLA---------KTPLGRFAG  217 (238)
Q Consensus       151 ~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~----~~~~~~~~~---------~~~~~r~~~  217 (238)
                      +...|+.+|.+.+.+++.++.+.   |++++.+.|+.+..+........    +.+......         .....-+..
T Consensus       171 p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~  247 (351)
T 3ruf_A          171 PLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCY  247 (351)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEE
Confidence            35789999999999999998876   78999999999988764321000    000111111         112224566


Q ss_pred             CCCccccccccccc
Q psy14567        218 KLKPKPWNRWLLPS  231 (238)
Q Consensus       218 ~~~ia~~~~~l~s~  231 (238)
                      .+|+|++++.++..
T Consensus       248 v~Dva~a~~~~~~~  261 (351)
T 3ruf_A          248 IDNVIQMNILSALA  261 (351)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhh
Confidence            88899988877655

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.84  E-value=9e-22  Score=165.12  Aligned_cols=203  Identities=14%  Similarity=0.024  Sum_probs=140.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhh--CCCEEEEecCChHhHH----------HHHh-hCCCceEEEeecCCHHHHHHHH
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQ--HEAIIIALSKTQANLD----------SLKQ-AFPNVQTVQVDLQDWARTRAAV   76 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~----------~~~~-~~~~~~~~~~D~~~~~~v~~~~   76 (238)
                      .+.++++||||+|+||++++++|++  .|++|++++|+.+...          .... ....+.++.+|++|+++++++ 
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-   86 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL-   86 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH-
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh-
Confidence            3556789999999999999999999  9999999999764110          0111 113578999999999998887 


Q ss_pred             HhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc--------
Q psy14567         77 SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA--------  148 (238)
Q Consensus        77 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~--------  148 (238)
                       ...++|+|||+||....      +.++ ++..+++|+.++..+++++..    .  ++++|++||......        
T Consensus        87 -~~~~~D~vih~A~~~~~------~~~~-~~~~~~~Nv~gt~~ll~aa~~----~--~~~~V~~SS~~vyg~~~~~~~E~  152 (362)
T 3sxp_A           87 -EKLHFDYLFHQAAVSDT------TMLN-QELVMKTNYQAFLNLLEIARS----K--KAKVIYASSAGVYGNTKAPNVVG  152 (362)
T ss_dssp             -TTSCCSEEEECCCCCGG------GCCC-HHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGGGGCSCCSSBCTT
T ss_pred             -hccCCCEEEECCccCCc------cccC-HHHHHHHHHHHHHHHHHHHHH----c--CCcEEEeCcHHHhCCCCCCCCCC
Confidence             34579999999996532      2233 678899999999999999842    2  346999999553221        


Q ss_pred             --CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC----CCCccC---------CcccCCCCC
Q psy14567        149 --LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS----DPAKAG---------PMLAKTPLG  213 (238)
Q Consensus       149 --~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~----~~~~~~---------~~~~~~~~~  213 (238)
                        ..+...|+.+|.+.+.+++.++.+     +++..+.|+.+..|.......    ...+..         .........
T Consensus       153 ~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  227 (362)
T 3sxp_A          153 KNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLR  227 (362)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEE
Confidence              223457999999999999887766     566677777776554321000    000000         111112334


Q ss_pred             CcCCCCCcccccccccccc
Q psy14567        214 RFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       214 r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+..++|+|+++++++.+.
T Consensus       228 ~~i~v~Dva~ai~~~~~~~  246 (362)
T 3sxp_A          228 DFVYIEDVIQANVKAMKAQ  246 (362)
T ss_dssp             ECEEHHHHHHHHHHHTTCS
T ss_pred             ccEEHHHHHHHHHHHHhcC
Confidence            4667899999999988764

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.84  E-value=5.2e-20  Score=153.37  Aligned_cols=158  Identities=15%  Similarity=0.118  Sum_probs=126.7

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      +.+..+.++++||||+|+||.+++++|+++|++|++++|+.+.        .++.++.+|++|.+++.++++   ++|+|
T Consensus        13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------~~~~~~~~Dl~d~~~~~~~~~---~~d~v   81 (347)
T 4id9_A           13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------TGGEEVVGSLEDGQALSDAIM---GVSAV   81 (347)
T ss_dssp             --------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------SCCSEEESCTTCHHHHHHHHT---TCSEE
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------CCccEEecCcCCHHHHHHHHh---CCCEE
Confidence            3445567789999999999999999999999999999998765        578899999999999998887   68999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-------------ccCCCC
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-------------TALEGH  152 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-------------~~~~~~  152 (238)
                      ||+|+....      +..+ ++..+++|+.++..+++++.+    .+ .+++|++||....             .+..+.
T Consensus        82 ih~A~~~~~------~~~~-~~~~~~~nv~~~~~ll~a~~~----~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~  149 (347)
T 4id9_A           82 LHLGAFMSW------APAD-RDRMFAVNVEGTRRLLDAASA----AG-VRRFVFASSGEVYPENRPEFLPVTEDHPLCPN  149 (347)
T ss_dssp             EECCCCCCS------SGGG-HHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCC
T ss_pred             EECCcccCc------chhh-HHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEECCHHHhCCCCCCCCCcCCCCCCCCC
Confidence            999996532      2333 578899999999999998854    33 4699999995432             233456


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcee
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM  189 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~  189 (238)
                      ..|+.+|.+.+.+++.++.+.   |++++.+.|+.+.
T Consensus       150 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~  183 (347)
T 4id9_A          150 SPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQ  183 (347)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEE
T ss_pred             ChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEe
Confidence            789999999999999988774   7999999999998

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.84  E-value=1.5e-21  Score=162.65  Aligned_cols=209  Identities=20%  Similarity=0.118  Sum_probs=145.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCC--CEEEEecCChH--hHHHHHhh--CCCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQA--NLDSLKQA--FPNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      .++++++||||+|+||.+++++|++.|  ++|+..+|...  ..+.+...  .+++.++.+|++|++++.++++.. ++|
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d  100 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER-DVQ  100 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-TCC
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc-CCC
Confidence            455678999999999999999999999  68888877642  22222221  247899999999999999999864 589


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc------------CCC
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA------------LEG  151 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~  151 (238)
                      +|||+||......    ..++ ++..+++|+.++..+++++.+.    + .+++|++||......            ..+
T Consensus       101 ~Vih~A~~~~~~~----~~~~-~~~~~~~nv~~~~~ll~a~~~~----~-~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p  170 (346)
T 4egb_A          101 VIVNFAAESHVDR----SIEN-PIPFYDTNVIGTVTLLELVKKY----P-HIKLVQVSTDEVYGSLGKTGRFTEETPLAP  170 (346)
T ss_dssp             EEEECCCCC--------------CHHHHHHTHHHHHHHHHHHHS----T-TSEEEEEEEGGGGCCCCSSCCBCTTSCCCC
T ss_pred             EEEECCcccchhh----hhhC-HHHHHHHHHHHHHHHHHHHHhc----C-CCEEEEeCchHHhCCCCcCCCcCCCCCCCC
Confidence            9999999764322    2233 5677899999999999988543    3 468999999754322            123


Q ss_pred             CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCccc---------CCCCCCcCCCCCcc
Q psy14567        152 HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLA---------KTPLGRFAGKLKPK  222 (238)
Q Consensus       152 ~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~---------~~~~~r~~~~~~ia  222 (238)
                      ...|+.+|.+.+.+++.++.+.   |++++.+.||.+.++........+.+......         .....-+...+|+|
T Consensus       171 ~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  247 (346)
T 4egb_A          171 NSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHC  247 (346)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHH
T ss_pred             CChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHH
Confidence            5789999999999999998875   78999999999998764221000011111111         11222345678899


Q ss_pred             cccccccccc
Q psy14567        223 PWNRWLLPSV  232 (238)
Q Consensus       223 ~~~~~l~s~~  232 (238)
                      +++.+++.+.
T Consensus       248 ~a~~~~~~~~  257 (346)
T 4egb_A          248 SAIDVVLHKG  257 (346)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHhcC
Confidence            9988887653

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.84  E-value=1.8e-20  Score=157.86  Aligned_cols=168  Identities=13%  Similarity=0.005  Sum_probs=129.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-----HHHHHh-----hCCCceEEEeecCCHHHHHHHHHhcCCc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-----LDSLKQ-----AFPNVQTVQVDLQDWARTRAAVSKVGPV   82 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~-----~~~~~~~~~~D~~~~~~v~~~~~~~g~i   82 (238)
                      ++++||||+|+||++++++|++.|++|++++|+.+.     ++.+..     ..+++.++.+|++|++++.++++.. ++
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~  103 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-KP  103 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-CC
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc-CC
Confidence            678999999999999999999999999999997543     222211     1246788999999999999998876 68


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCC
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEG  151 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~  151 (238)
                      |+|||+||.....    .+.++ ++..+++|+.++..+++++.+...+ + .+++|++||.....           +..+
T Consensus       104 d~vih~A~~~~~~----~~~~~-~~~~~~~N~~g~~~l~~a~~~~~~~-~-~~~iv~~SS~~~~~~~~~~~~~E~~~~~~  176 (375)
T 1t2a_A          104 TEIYNLGAQSHVK----ISFDL-AEYTADVDGVGTLRLLDAVKTCGLI-N-SVKFYQASTSELYGKVQEIPQKETTPFYP  176 (375)
T ss_dssp             SEEEECCSCCCHH----HHHHS-HHHHHHHHTHHHHHHHHHHHHTTCT-T-TCEEEEEEEGGGTCSCSSSSBCTTSCCCC
T ss_pred             CEEEECCCccccc----ccccC-HHHHHHHHHHHHHHHHHHHHHhCCC-c-cceEEEecchhhhCCCCCCCCCccCCCCC
Confidence            9999999975321    12344 6788999999999999999765431 1 36999999976532           2234


Q ss_pred             CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecC
Q psy14567        152 HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ  191 (238)
Q Consensus       152 ~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~  191 (238)
                      ...|+.+|.+.+.+++.++.++   ++.+..+.|+.+..+
T Consensus       177 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp  213 (375)
T 1t2a_A          177 RSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESP  213 (375)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred             CChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCC
Confidence            6789999999999999998876   577777777766554

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.84  E-value=4.7e-20  Score=152.52  Aligned_cols=164  Identities=16%  Similarity=0.133  Sum_probs=130.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      ++++||||+|+||++++++|++.|++|++++|+.....+  ...+++.++.+|++|++++++++++. ++|+|||+||..
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~-~~d~vih~a~~~   78 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED--AITEGAKFYNGDLRDKAFLRDVFTQE-NIEAVMHFAADS   78 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG--GSCTTSEEEECCTTCHHHHHHHHHHS-CEEEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh--hcCCCcEEEECCCCCHHHHHHHHhhc-CCCEEEECCccc
Confidence            468899999999999999999999999999987543211  11126888999999999999998763 699999999975


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-----------CCCCchhhHHHHH
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-----------LEGHTIYSASKAA  161 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~y~~sK~a  161 (238)
                      ...    .+.++ ++..+++|+.++..+++++..    .+ .+++|++||......           ..+...|+.+|.+
T Consensus        79 ~~~----~~~~~-~~~~~~~n~~~~~~l~~a~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~  148 (330)
T 2c20_A           79 LVG----VSMEK-PLQYYNNNVYGALCLLEVMDE----FK-VDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLA  148 (330)
T ss_dssp             CHH----HHHHS-HHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHH
T ss_pred             Ccc----ccccC-HHHHHHHHhHHHHHHHHHHHH----cC-CCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHH
Confidence            421    12234 678899999999999998743    23 469999999764321           2245799999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      .+.+++.++.++   |++++.+.||.+.++.
T Consensus       149 ~e~~~~~~~~~~---~~~~~ilrp~~v~G~~  176 (330)
T 2c20_A          149 IEKMLHWYSQAS---NLRYKIFRYFNVAGAT  176 (330)
T ss_dssp             HHHHHHHHHHTS---SCEEEEEECSEEECCC
T ss_pred             HHHHHHHHHHHh---CCcEEEEecCcccCCC
Confidence            999999988764   7999999999998875

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.84  E-value=2.2e-20  Score=154.95  Aligned_cols=203  Identities=15%  Similarity=0.064  Sum_probs=141.6

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      ....++++++||||+|+||++++++|++.|++|++++|+.+...+.....+++.++.+|++|+++++++++.. ++|+||
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~D~vi   94 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDL-QPDAVV   94 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHH-CCSEEE
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhcc-CCcEEE
Confidence            3444667899999999999999999999999999999976432111111246888999999999999988763 689999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc----cC--------CCC-c
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT----AL--------EGH-T  153 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~--------~~~-~  153 (238)
                      |+||.....     +.++ ++  +++|+.++..+++++.+    .+ .+++|++||.....    ..        .+. .
T Consensus        95 h~A~~~~~~-----~~~~-~~--~~~N~~~~~~l~~a~~~----~~-~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~  161 (333)
T 2q1w_A           95 HTAASYKDP-----DDWY-ND--TLTNCVGGSNVVQAAKK----NN-VGRFVYFQTALCYGVKPIQQPVRLDHPRNPANS  161 (333)
T ss_dssp             ECCCCCSCT-----TCHH-HH--HHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTC
T ss_pred             ECceecCCC-----ccCC-hH--HHHHHHHHHHHHHHHHH----hC-CCEEEEECcHHHhCCCcccCCCCcCCCCCCCCC
Confidence            999976432     2333 44  89999999999999875    23 47999999976543    11        234 7


Q ss_pred             hhhHHHHHHHHHHHH-HHHHhCCCCeEEEEEeCCceecCcccCCCCCCCcc-----C-CcccCCCCCCcCCCCCcccccc
Q psy14567        154 IYSASKAALDSITRT-MALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKA-----G-PMLAKTPLGRFAGKLKPKPWNR  226 (238)
Q Consensus       154 ~y~~sK~al~~l~~~-l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~-----~-~~~~~~~~~r~~~~~~ia~~~~  226 (238)
                      .|+.+|.+.+.+++. ++        ++..+.|+.+..+...... .+.+.     . ......+...+..++|+|+++.
T Consensus       162 ~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~  232 (333)
T 2q1w_A          162 SYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNVSGP-LPIFFQRLSEGKKCFVTKARRDFVFVKDLARATV  232 (333)
T ss_dssp             HHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCCSSH-HHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCcCcH-HHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHH
Confidence            899999999999987 54        4556777766655410000 00000     0 1111234566789999999999


Q ss_pred             cccccc
Q psy14567        227 WLLPSV  232 (238)
Q Consensus       227 ~l~s~~  232 (238)
                      +++++.
T Consensus       233 ~~~~~~  238 (333)
T 2q1w_A          233 RAVDGV  238 (333)
T ss_dssp             HHHTTC
T ss_pred             HHHhcC
Confidence            988753

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.83  E-value=2.4e-20  Score=157.45  Aligned_cols=204  Identities=14%  Similarity=-0.023  Sum_probs=149.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ++++++||||+|+||++++++|+++|++|++++|+.+.....  ...++.++.+|++|++++.++++   ++|+|||+||
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~v~~~~~Dl~d~~~~~~~~~---~~d~Vih~A~  102 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE--DMFCDEFHLVDLRVMENCLKVTE---GVDHVFNLAA  102 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG--GGTCSEEEECCTTSHHHHHHHHT---TCSEEEECCC
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh--ccCCceEEECCCCCHHHHHHHhC---CCCEEEECce
Confidence            456789999999999999999999999999999987543221  12368899999999999988886   5899999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc------------------cCCCC
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT------------------ALEGH  152 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~~~~  152 (238)
                      .......   ..++ ++..+++|+.++..+++++.+    .+ .+++|++||.....                  +..+.
T Consensus       103 ~~~~~~~---~~~~-~~~~~~~Nv~g~~~ll~a~~~----~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~  173 (379)
T 2c5a_A          103 DMGGMGF---IQSN-HSVIMYNNTMISFNMIEAARI----NG-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQ  173 (379)
T ss_dssp             CCCCHHH---HTTC-HHHHHHHHHHHHHHHHHHHHH----TT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCS
T ss_pred             ecCcccc---cccC-HHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCC
Confidence            7532111   0223 677889999999999999853    23 46999999976432                  22346


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC----CCccCC----------cccCCCCCCcCCC
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD----PAKAGP----------MLAKTPLGRFAGK  218 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~----~~~~~~----------~~~~~~~~r~~~~  218 (238)
                      ..|+.+|.+.+.+++.++.+.   |++++.+.||.+.++........    ..+...          .........+..+
T Consensus       174 ~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v  250 (379)
T 2c5a_A          174 DAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFI  250 (379)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEH
T ss_pred             ChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEH
Confidence            789999999999999998775   79999999999998864321100    001000          1111123346678


Q ss_pred             CCccccccccccc
Q psy14567        219 LKPKPWNRWLLPS  231 (238)
Q Consensus       219 ~~ia~~~~~l~s~  231 (238)
                      +|+|+++++++.+
T Consensus       251 ~Dva~ai~~~l~~  263 (379)
T 2c5a_A          251 DECVEGVLRLTKS  263 (379)
T ss_dssp             HHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhhc
Confidence            8999998888764

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.83  E-value=6.6e-21  Score=158.48  Aligned_cols=171  Identities=16%  Similarity=0.080  Sum_probs=130.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCC-------CEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHE-------AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      +.++++||||+|+||.+++++|++.|       ++|++++|+.+....  ....++.++.+|++|+++++++++  +++|
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~--~~~d   88 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--GFSGAVDARAADLSAPGEAEKLVE--ARPD   88 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--TCCSEEEEEECCTTSTTHHHHHHH--TCCS
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--ccCCceeEEEcCCCCHHHHHHHHh--cCCC
Confidence            34468999999999999999999999       899999998643221  123457889999999999988886  4799


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-C----------CC
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-E----------GH  152 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~----------~~  152 (238)
                      +|||+||....     .+.++ ++..+++|+.++..+++++.+...+++..+++|++||....... +          +.
T Consensus        89 ~vih~A~~~~~-----~~~~~-~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~  162 (342)
T 2hrz_A           89 VIFHLAAIVSG-----EAELD-FDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPL  162 (342)
T ss_dssp             EEEECCCCCHH-----HHHHC-HHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCS
T ss_pred             EEEECCccCcc-----ccccc-HHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCc
Confidence            99999997531     22344 78889999999999999998754332113699999998654322 1          56


Q ss_pred             chhhHHHHHHHHHHHHHHHHhC--CCCeEEEEEe--CCceecC
Q psy14567        153 TIYSASKAALDSITRTMALELG--PYNIRVNSVQ--PTVVMTQ  191 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~--~~~i~v~~i~--PG~v~t~  191 (238)
                      ..|+.+|.+.+.+++.++.+..  ...+|++.++  ||...++
T Consensus       163 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~  205 (342)
T 2hrz_A          163 TSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAA  205 (342)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCS
T ss_pred             chHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcch
Confidence            7999999999999999887642  2346777777  8876543

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.83  E-value=1e-21  Score=161.64  Aligned_cols=194  Identities=14%  Similarity=0.057  Sum_probs=112.3

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      ++++||||+|+||++++++|+++|++|++++|+.+.        ++  ++.+|++|++++.++++.. ++|+|||+||..
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~--~~~~Dl~d~~~~~~~~~~~-~~d~vih~A~~~   71 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------PK--FEQVNLLDSNAVHHIIHDF-QPHVIVHCAAER   71 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------CHHHHHHH-CCSEEEECC---
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------CC--eEEecCCCHHHHHHHHHhh-CCCEEEECCccc
Confidence            467899999999999999999999999999987654        12  6789999999998888765 589999999975


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc----------CCCCchhhHHHHHH
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA----------LEGHTIYSASKAAL  162 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------~~~~~~y~~sK~al  162 (238)
                      ...    .+.++ ++..+++|+.++..+++++.+.      ++++|++||.....+          ..+...|+.+|.+.
T Consensus        72 ~~~----~~~~~-~~~~~~~n~~~~~~l~~a~~~~------~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~  140 (315)
T 2ydy_A           72 RPD----VVENQ-PDAASQLNVDASGNLAKEAAAV------GAFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDG  140 (315)
T ss_dssp             ---------------------CHHHHHHHHHHHHH------TCEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHH
T ss_pred             Chh----hhhcC-HHHHHHHHHHHHHHHHHHHHHc------CCeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHH
Confidence            432    12334 7788999999999999998752      249999999875433          34567999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecC---cccCCCCCCC-ccCC-cccCCCCCCcCCCCCccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQ---MGRTGWSDPA-KAGP-MLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~---~~~~~~~~~~-~~~~-~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +.+++.++.++  ..+|++.|+ |...++   +......... .... .....+...+..++|+|+++.+++++
T Consensus       141 e~~~~~~~~~~--~~lR~~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  211 (315)
T 2ydy_A          141 EKAVLENNLGA--AVLRIPILY-GEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEK  211 (315)
T ss_dssp             HHHHHHHCTTC--EEEEECSEE-CSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCCe--EEEeeeeee-CCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHh
Confidence            99998875332  235555555 444431   1110000000 0000 01123456778999999999988764

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.83  E-value=1e-19  Score=152.86  Aligned_cols=167  Identities=13%  Similarity=0.053  Sum_probs=122.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-----HHHHHhh----CCCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-----LDSLKQA----FPNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      ++++||||+|+||++++++|+++|++|++++|+.+.     ++++.+.    ..++.++.+|++|++++.++++.. ++|
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d   80 (372)
T 1db3_A            2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-QPD   80 (372)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-CCS
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc-CCC
Confidence            568999999999999999999999999999998654     2222211    246788899999999999998876 689


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-----------CCCC
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-----------LEGH  152 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~  152 (238)
                      +|||+||.....    .+.++ ++..+++|+.++..+++++.+...+ + .+++|++||......           ..+.
T Consensus        81 ~vih~A~~~~~~----~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~  153 (372)
T 1db3_A           81 EVYNLGAMSHVA----VSFES-PEYTADVDAMGTLRLLEAIRFLGLE-K-KTRFYQASTSELYGLVQEIPQKETTPFYPR  153 (372)
T ss_dssp             EEEECCCCCTTT----TTTSC-HHHHHHHHTHHHHHHHHHHHHTTCT-T-TCEEEEEEEGGGGTTCCSSSBCTTSCCCCC
T ss_pred             EEEECCcccCcc----ccccC-HHHHHHHHHHHHHHHHHHHHHhCCC-C-CcEEEEeCChhhhCCCCCCCCCccCCCCCC
Confidence            999999975432    22333 6777899999999999999775432 1 379999999754321           2346


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceec
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT  190 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t  190 (238)
                      ..|+.+|.+.+.+++.++.++   ++.+..+.|..+..
T Consensus       154 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~g  188 (372)
T 1db3_A          154 SPYAVAKLYAYWITVNYRESY---GMYACNGILFNHES  188 (372)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEEC
T ss_pred             ChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccC
Confidence            789999999999999999876   34444455544433

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.83  E-value=9.7e-21  Score=147.84  Aligned_cols=186  Identities=11%  Similarity=0.112  Sum_probs=125.2

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARF   94 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~   94 (238)
                      ++||||+|+||++++++|+++|++|++++|+.++.+.+.   +++.++.+|++|+++     +.+.++|+|||+||....
T Consensus         3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---~~~~~~~~D~~d~~~-----~~~~~~d~vi~~ag~~~~   74 (221)
T 3ew7_A            3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---KDINILQKDIFDLTL-----SDLSDQNVVVDAYGISPD   74 (221)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---SSSEEEECCGGGCCH-----HHHTTCSEEEECCCSSTT
T ss_pred             EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---CCCeEEeccccChhh-----hhhcCCCEEEECCcCCcc
Confidence            689999999999999999999999999999998877664   678999999999877     333568999999998421


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCC------------CCchhhHHHHHH
Q psy14567         95 DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALE------------GHTIYSASKAAL  162 (238)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------~~~~y~~sK~al  162 (238)
                      .              .+.|+.++..++    +.+++.+ .+++|++||..+..+.+            +...|+.+|.+.
T Consensus        75 ~--------------~~~~~~~~~~l~----~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~  135 (221)
T 3ew7_A           75 E--------------AEKHVTSLDHLI----SVLNGTV-SPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQA  135 (221)
T ss_dssp             T--------------TTSHHHHHHHHH----HHHCSCC-SSEEEEECCCC-------------------CCCSCCHHHHH
T ss_pred             c--------------cchHHHHHHHHH----HHHHhcC-CceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHH
Confidence            0              234555554444    4445554 57999999987643322            345699999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCC-CCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG-WSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.+. .+..  ...|++++.+.||.+.++..... +...  ............+..++|+|++++.++.+.
T Consensus       136 e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~~~~--~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  201 (221)
T 3ew7_A          136 KQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDYQIG--KDHLLFGSDGNSFISMEDYAIAVLDEIERP  201 (221)
T ss_dssp             HHHH-HHHT--TTTTSCEEEEECSSCCCCC-----------------------CCCHHHHHHHHHHHHHSC
T ss_pred             HHHH-HHHh--hccCccEEEEeCcceecCCCccCceEec--cccceecCCCCceEeHHHHHHHHHHHHhCc
Confidence            8863 2222  15689999999999988722110 0000  000000011234678899999999988764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.83  E-value=3.3e-21  Score=161.34  Aligned_cols=201  Identities=13%  Similarity=0.061  Sum_probs=144.4

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh--cCCccEEEEc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK--VGPVDVLINN   88 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~g~id~li~~   88 (238)
                      .++++||||+|+||++++++|++.| ++|++++|+.+... . .....+. +.+|++++++++++++.  ++++|+|||+
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~-~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~  122 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-F-VNLVDLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHE  122 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-G-GGTTTSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-h-hcccCce-EeeecCcHHHHHHHHhhcccCCCCEEEEC
Confidence            3568999999999999999999999 89999998765421 1 1222333 77999999999888864  3579999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-----------CCCchhhH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-----------EGHTIYSA  157 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~y~~  157 (238)
                      ||....      +.++ ++..+++|+.++..+++++.+    .+ . ++|++||.......           .+...|+.
T Consensus       123 A~~~~~------~~~~-~~~~~~~n~~~~~~ll~a~~~----~~-~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~  189 (357)
T 2x6t_A          123 GACSST------TEWD-GKYMMDNNYQYSKELLHYCLE----RE-I-PFLYASSAATYGGRTSDFIESREYEKPLNVFGY  189 (357)
T ss_dssp             CSCCCT------TCCC-HHHHHHHTHHHHHHHHHHHHH----HT-C-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHH
T ss_pred             CcccCC------ccCC-HHHHHHHHHHHHHHHHHHHHH----cC-C-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHH
Confidence            997643      1223 677889999999999999875    23 4 99999998653322           13568999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC--CC--CCccC---------CcccCCC-CCCcCCCCCccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW--SD--PAKAG---------PMLAKTP-LGRFAGKLKPKP  223 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~--~~--~~~~~---------~~~~~~~-~~r~~~~~~ia~  223 (238)
                      +|.+.+.+++.++.++   |++++.+.||.+.++......  ..  ..+..         ......+ ...+..++|+|+
T Consensus       190 sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  266 (357)
T 2x6t_A          190 SKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD  266 (357)
T ss_dssp             HHHHHHHHHHHHGGGC---SSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHc---CCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHH
Confidence            9999999999987763   799999999999987542100  00  00000         0111112 345678899999


Q ss_pred             cccccccc
Q psy14567        224 WNRWLLPS  231 (238)
Q Consensus       224 ~~~~l~s~  231 (238)
                      ++.+++.+
T Consensus       267 ai~~~~~~  274 (357)
T 2x6t_A          267 VNLWFLEN  274 (357)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhc
Confidence            99888765

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.82  E-value=2.5e-20  Score=153.56  Aligned_cols=203  Identities=11%  Similarity=0.053  Sum_probs=137.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecC-ChHh---HHHHHhh---CCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK-TQAN---LDSLKQA---FPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r-~~~~---~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      ++++||||+|+||++++++|+++|++|+++.| +.+.   ...+...   ..++.++.+|++|+++++++++   .+|+|
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~v   78 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE---GCVGI   78 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT---TCSEE
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc---CCCEE
Confidence            45789999999999999999999999999888 6532   2222111   1146788999999999988887   47999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCC---------------
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALE---------------  150 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------  150 (238)
                      ||+|+..   .   ...++.++..+++|+.++..+++++.+..   + .+++|++||..+..+.+               
T Consensus        79 ih~A~~~---~---~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~-~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~  148 (322)
T 2p4h_X           79 FHTASPI---D---FAVSEPEEIVTKRTVDGALGILKACVNSK---T-VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVD  148 (322)
T ss_dssp             EECCCCC--------------CHHHHHHHHHHHHHHHHHTTCS---S-CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHH
T ss_pred             EEcCCcc---c---CCCCChHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEeccHHHcccCCCCCeecCCccccchh
Confidence            9999642   1   11111134578999999999999986531   2 46999999987532211               


Q ss_pred             ------CC-chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC-CccCC-ccc---CCCCC--CcC
Q psy14567        151 ------GH-TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP-AKAGP-MLA---KTPLG--RFA  216 (238)
Q Consensus       151 ------~~-~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~-~~~~~-~~~---~~~~~--r~~  216 (238)
                            +. ..|+.||.+.+.+++.++.+   .|++++.+.||.+.+++........ ..... ...   ..+.+  .+.
T Consensus       149 ~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i  225 (322)
T 2p4h_X          149 LLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMV  225 (322)
T ss_dssp             HHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEE
T ss_pred             hhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEE
Confidence                  01 16999999888888776544   4899999999999999754221100 00000 000   01112  378


Q ss_pred             CCCCccccccccccc
Q psy14567        217 GKLKPKPWNRWLLPS  231 (238)
Q Consensus       217 ~~~~ia~~~~~l~s~  231 (238)
                      .++|+|+++++++++
T Consensus       226 ~v~Dva~a~~~~~~~  240 (322)
T 2p4h_X          226 HVDDVARAHIYLLEN  240 (322)
T ss_dssp             EHHHHHHHHHHHHHS
T ss_pred             EHHHHHHHHHHHhhC
Confidence            999999999998865

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.82  E-value=1.1e-19  Score=150.71  Aligned_cols=201  Identities=18%  Similarity=0.114  Sum_probs=145.1

Q ss_pred             CCCCCCCCchHHHHHHHHhhC---C---CEEEEecCChH--hHHHHHh--hCCCceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQH---E---AIIIALSKTQA--NLDSLKQ--AFPNVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~---G---~~V~~~~r~~~--~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      ++||||+|+||++++++|+++   |   ++|++++|+..  ..+.+..  ..+++.++.+|++|++++++++   +++|+
T Consensus         3 vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~~~d~   79 (337)
T 1r6d_A            3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL---RGVDA   79 (337)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT---TTCCE
T ss_pred             EEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh---cCCCE
Confidence            689999999999999999996   8   89999998642  1112211  1246889999999999888877   46899


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCCCc
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEGHT  153 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~  153 (238)
                      |||+||....    +.+.++ ++..+++|+.++..+++++.+.    + .+++|++||.....           +..+..
T Consensus        80 Vih~A~~~~~----~~~~~~-~~~~~~~Nv~~~~~l~~a~~~~----~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~  149 (337)
T 1r6d_A           80 IVHFAAESHV----DRSIAG-ASVFTETNVQGTQTLLQCAVDA----G-VGRVVHVSTNQVYGSIDSGSWTESSPLEPNS  149 (337)
T ss_dssp             EEECCSCCCH----HHHHHC-CHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCS
T ss_pred             EEECCCccCc----hhhhhC-HHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEecchHHhCCCCCCCCCCCCCCCCCC
Confidence            9999997532    112233 6778899999999999998764    2 46999999965321           234567


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCc---------ccCCCCCCcCCCCCcccc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPM---------LAKTPLGRFAGKLKPKPW  224 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~---------~~~~~~~r~~~~~~ia~~  224 (238)
                      .|+.+|.+.+.+++.++.++   |++++.+.||.+.++........+.+....         ........+..++|+|++
T Consensus       150 ~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  226 (337)
T 1r6d_A          150 PYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRG  226 (337)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHH
Confidence            99999999999999998876   689999999999988642100000000000         111123356678999999


Q ss_pred             ccccccc
Q psy14567        225 NRWLLPS  231 (238)
Q Consensus       225 ~~~l~s~  231 (238)
                      +.+++.+
T Consensus       227 ~~~~~~~  233 (337)
T 1r6d_A          227 IALVLAG  233 (337)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhC
Confidence            8888754

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.81  E-value=7e-19  Score=146.02  Aligned_cols=165  Identities=13%  Similarity=0.072  Sum_probs=125.4

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh----HhHHHHHhh-CCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ----ANLDSLKQA-FPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      +++||||+|+||++++++|+++|++|++++|..    +..+.+.+. ..++.++.+|++|++++.++++.. ++|+|||+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-~~D~vih~   80 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-AIDTVIHF   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-TCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-CCCEEEEC
Confidence            368999999999999999999999999987642    223333322 245788999999999999998865 59999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cC-CCCchhh
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------AL-EGHTIYS  156 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~-~~~~~y~  156 (238)
                      ||......    ..++ ....+++|+.++..+++++..    .+ .+++|++||.....           +. ++...|+
T Consensus        81 A~~~~~~~----~~~~-~~~~~~~n~~~~~~l~~~~~~----~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~  150 (338)
T 1udb_A           81 AGLKAVGE----SVQK-PLEYYDNNVNGTLRLISAMRA----AN-VKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYG  150 (338)
T ss_dssp             CSCCCHHH----HHHC-HHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHH
T ss_pred             CccCcccc----chhc-HHHHHHHHHHHHHHHHHHHHh----cC-CCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHH
Confidence            99753211    1233 567789999999999887643    33 46999999976431           11 2367999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecC
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ  191 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~  191 (238)
                      .+|++.+.+++.++.+.  .++++..+.|+.+-.+
T Consensus       151 ~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~  183 (338)
T 1udb_A          151 KSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA  183 (338)
T ss_dssp             HHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECC
T ss_pred             HHHHHHHHHHHHHHHhc--CCCceEEEeeceecCC
Confidence            99999999999998874  3688888888777554

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.81  E-value=1.8e-20  Score=155.55  Aligned_cols=207  Identities=18%  Similarity=0.158  Sum_probs=139.3

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhH------HHHHhhCCCceEEEeecCCHHHHHHHHHhc
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANL------DSLKQAFPNVQTVQVDLQDWARTRAAVSKV   79 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   79 (238)
                      +.++...++++||||+|+||++++++|+++|++|+++.|+.++.      .++. ...++.++.+|++|++++.++++  
T Consensus         3 ~~~~~~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--   79 (338)
T 2rh8_A            3 TQHPIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA--   79 (338)
T ss_dssp             ------CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT--
T ss_pred             cCcCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc--
Confidence            33444456789999999999999999999999999988876532      1222 22467889999999988888876  


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----c----C-
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----A----L-  149 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----~----~-  149 (238)
                       .+|+|||+|+....   .   .++..+..+++|+.++..+++++.+..   + .+++|++||..+..     +    . 
T Consensus        80 -~~D~Vih~A~~~~~---~---~~~~~~~~~~~nv~gt~~ll~aa~~~~---~-v~r~V~~SS~~~~~~~~~~~~~~~~~  148 (338)
T 2rh8_A           80 -GCDFVFHVATPVHF---A---SEDPENDMIKPAIQGVVNVMKACTRAK---S-VKRVILTSSAAAVTINQLDGTGLVVD  148 (338)
T ss_dssp             -TCSEEEEESSCCCC---------------CHHHHHHHHHHHHHHHHCT---T-CCEEEEECCHHHHHHHHHTCSCCCCC
T ss_pred             -CCCEEEEeCCccCC---C---CCCcHHHHHHHHHHHHHHHHHHHHHcC---C-cCEEEEEecHHHeecCCcCCCCcccC
Confidence             47999999985421   1   111124478999999999999987532   1 36999999976311     0    0 


Q ss_pred             -----------C---CCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCc---ccCC--
Q psy14567        150 -----------E---GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPM---LAKT--  210 (238)
Q Consensus       150 -----------~---~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~---~~~~--  210 (238)
                                 +   ....|+.||.+.+.+++.++.+.   |++++.+.||.+.++.......  ......   ....  
T Consensus       149 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~~~~~--~~~~~~~~~~~g~~~  223 (338)
T 2rh8_A          149 EKNWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGSSLTSDVP--SSIGLAMSLITGNEF  223 (338)
T ss_dssp             TTTTTCC-------CCCCCCTTSCCHHHHHHHHHHHHH---TCCEEEEEECEEESCCSSSSCC--HHHHHHHHHHHTCHH
T ss_pred             hhhccchhhccccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCC--chHHHHHHHHcCCcc
Confidence                       0   01159999999999988877553   7999999999999987533211  100000   0000  


Q ss_pred             ----------CCC--CcCCCCCccccccccccc
Q psy14567        211 ----------PLG--RFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       211 ----------~~~--r~~~~~~ia~~~~~l~s~  231 (238)
                                +.+  .+..++|+|+++++++++
T Consensus       224 ~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~  256 (338)
T 2rh8_A          224 LINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEK  256 (338)
T ss_dssp             HHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHC
T ss_pred             ccccccccccccCcccEEEHHHHHHHHHHHHcC
Confidence                      001  378899999999888765

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.81  E-value=1.1e-21  Score=152.73  Aligned_cols=187  Identities=9%  Similarity=0.060  Sum_probs=136.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ++++||||+|+||++++++|+++|+  +|++++|+.+.      ..+++.++.+|+++++++.+++     +|++||+||
T Consensus         6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~------~~~~~~~~~~D~~~~~~~~~~~-----~d~vi~~a~   74 (215)
T 2a35_A            6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA------EHPRLDNPVGPLAELLPQLDGS-----IDTAFCCLG   74 (215)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC------CCTTEECCBSCHHHHGGGCCSC-----CSEEEECCC
T ss_pred             ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc------cCCCceEEeccccCHHHHHHhh-----hcEEEECee
Confidence            4689999999999999999999998  99999998765      2346778899998887665544     899999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHH
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMA  170 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~  170 (238)
                      ....      +.++ ++..+++|+.++..+++++.+    .+ .+++|++||.....  ++...|+.+|.+++.+++.  
T Consensus        75 ~~~~------~~~~-~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~--~~~~~y~~sK~~~e~~~~~--  138 (215)
T 2a35_A           75 TTIK------EAGS-EEAFRAVDFDLPLAVGKRALE----MG-ARHYLVVSALGADA--KSSIFYNRVKGELEQALQE--  138 (215)
T ss_dssp             CCHH------HHSS-HHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCCT--TCSSHHHHHHHHHHHHHTT--
T ss_pred             eccc------cCCC-HHHHHHhhHHHHHHHHHHHHH----cC-CCEEEEECCcccCC--CCccHHHHHHHHHHHHHHH--
Confidence            7532      1223 677889999999999988754    23 46899999987643  2356899999999998764  


Q ss_pred             HHhCCCCeE-EEEEeCCceecCcccCCCCCCCccCCcccCCC-CCCcCCCCCcccccccccccc
Q psy14567        171 LELGPYNIR-VNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTP-LGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       171 ~~~~~~~i~-v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~ia~~~~~l~s~~  232 (238)
                           .|++ ++.+.||.+.++.....+. +..........+ ...+..++|+|+++..++.+.
T Consensus       139 -----~~~~~~~~vrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~  196 (215)
T 2a35_A          139 -----QGWPQLTIARPSLLFGPREEFRLA-EILAAPIARILPGKYHGIEACDLARALWRLALEE  196 (215)
T ss_dssp             -----SCCSEEEEEECCSEESTTSCEEGG-GGTTCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             -----cCCCeEEEEeCceeeCCCCcchHH-HHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcC
Confidence                 2788 9999999999886431100 000000000000 123567889999998887764

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.81  E-value=4e-19  Score=147.23  Aligned_cols=170  Identities=13%  Similarity=-0.019  Sum_probs=128.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhH--HHHHhh--CCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANL--DSLKQA--FPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~--~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      ...+.++||||+|+||++++++|++.|++|++++|+.+..  ..+...  .+++.++.+|++|++++.++++.. ++|+|
T Consensus        12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d~V   90 (335)
T 1rpn_A           12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-QPQEV   90 (335)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-CCSEE
T ss_pred             ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-CCCEE
Confidence            3556789999999999999999999999999999986531  112211  235788999999999999998866 68999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-----------CCCCch
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-----------LEGHTI  154 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~  154 (238)
                      ||+||.....    ...++ ++..+++|+.++..+++++.+.    +..+++|++||......           ..+...
T Consensus        91 ih~A~~~~~~----~~~~~-~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~  161 (335)
T 1rpn_A           91 YNLAAQSFVG----ASWNQ-PVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTPFYPRSP  161 (335)
T ss_dssp             EECCSCCCHH----HHTTS-HHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             EECccccchh----hhhhC-hHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCCh
Confidence            9999965321    11123 5777899999999999998653    21269999999754321           123568


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      |+.+|.+.+.+++.++.++   ++.+..+.|+.+..+.
T Consensus       162 Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~  196 (335)
T 1rpn_A          162 YGVAKLYGHWITVNYRESF---GLHASSGILFNHESPL  196 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred             hHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCC
Confidence            9999999999999998776   5777778888877664

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.81  E-value=6.1e-20  Score=150.83  Aligned_cols=194  Identities=13%  Similarity=0.063  Sum_probs=140.3

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      +.++||||+|+||++++++|++.|++|++++|+.+..+ +    .++.++.+|++ ++++.++++   ++|+|||+||..
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~----~~~~~~~~Dl~-~~~~~~~~~---~~d~Vih~a~~~   73 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I----NDYEYRVSDYT-LEDLINQLN---DVDAVVHLAATR   73 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------CCEEEECCCC-HHHHHHHTT---TCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C----CceEEEEcccc-HHHHHHhhc---CCCEEEEccccC
Confidence            46889999999999999999999999999999954433 3    27889999999 998888877   689999999976


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCCCchhhHHHHH
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEGHTIYSASKAA  161 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~y~~sK~a  161 (238)
                      ...     +    ....+++|+.++..+++++..    .+ ..++|++||.....           +..+...|+.+|.+
T Consensus        74 ~~~-----~----~~~~~~~n~~~~~~ll~a~~~----~~-~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~  139 (311)
T 3m2p_A           74 GSQ-----G----KISEFHDNEILTQNLYDACYE----NN-ISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLA  139 (311)
T ss_dssp             CSS-----S----CGGGTHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHH
T ss_pred             CCC-----C----hHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHH
Confidence            543     1    344568999999998888853    33 45899999965422           12245799999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCc---------ccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPM---------LAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~---------~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+.+++.++.+   .|++++.+.|+.+..+..........+....         ........+...+|+|+++..++.+.
T Consensus       140 ~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~  216 (311)
T 3m2p_A          140 CEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQE  216 (311)
T ss_dssp             HHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCT
T ss_pred             HHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcC
Confidence            99999998875   3799999999999887643210000111111         11112234566778999988888764

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.80  E-value=6.4e-21  Score=153.61  Aligned_cols=185  Identities=17%  Similarity=0.073  Sum_probs=133.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      +++||||+|+||++++++|+ +|++|++++|+.+..       .+   +.+|++|++++.++++.. ++|++|||||...
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-------~~---~~~Dl~~~~~~~~~~~~~-~~d~vi~~a~~~~   69 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-------GG---YKLDLTDFPRLEDFIIKK-RPDVIINAAAMTD   69 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-------TC---EECCTTSHHHHHHHHHHH-CCSEEEECCCCCC
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-------CC---ceeccCCHHHHHHHHHhc-CCCEEEECCcccC
Confidence            47899999999999999999 489999999987421       12   789999999999998865 6899999999764


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCC----------CCchhhHHHHHHH
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALE----------GHTIYSASKAALD  163 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----------~~~~y~~sK~al~  163 (238)
                      ..    ...++ ++..+++|+.++..+++++.+    .  ++++|++||.....+.+          +...|+.+|.+++
T Consensus        70 ~~----~~~~~-~~~~~~~n~~~~~~l~~~~~~----~--~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e  138 (273)
T 2ggs_A           70 VD----KCEIE-KEKAYKINAEAVRHIVRAGKV----I--DSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGE  138 (273)
T ss_dssp             HH----HHHHC-HHHHHHHHTHHHHHHHHHHHH----T--TCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHH
T ss_pred             hh----hhhhC-HHHHHHHhHHHHHHHHHHHHH----h--CCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHH
Confidence            21    22344 788899999999999999864    2  35999999987654322          3579999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC---CCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW---SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      .+++.    +....+|++.|+ |  ++++.....   ....... ...  +..++..++|+|+++.+++++
T Consensus       139 ~~~~~----~~~~~iR~~~v~-G--~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~dva~~i~~~~~~  199 (273)
T 2ggs_A          139 TFALQ----DDSLIIRTSGIF-R--NKGFPIYVYKTLKEGKTVF-AFK--GYYSPISARKLASAILELLEL  199 (273)
T ss_dssp             HHHCC----TTCEEEEECCCB-S--SSSHHHHHHHHHHTTCCEE-EES--CEECCCBHHHHHHHHHHHHHH
T ss_pred             HHHhC----CCeEEEeccccc-c--ccHHHHHHHHHHHcCCCEE-eec--CCCCceEHHHHHHHHHHHHhc
Confidence            99987    333456666666 4  233211100   0000000 001  145688999999999998865

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.80  E-value=3.2e-19  Score=146.31  Aligned_cols=161  Identities=19%  Similarity=0.120  Sum_probs=129.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhC--CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQH--EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.++||||+|+||++++++|++.  |++|++++|+.+..+ +.   +++.++.+|++|++++.+++++. ++|+|||+||
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~---~~~~~~~~D~~d~~~~~~~~~~~-~~d~vih~a~   77 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV---NSGPFEVVNALDFNQIEHLVEVH-KITDIYLMAA   77 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH---HSSCEEECCTTCHHHHHHHHHHT-TCCEEEECCC
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc---CCCceEEecCCCHHHHHHHHhhc-CCCEEEECCc
Confidence            45789999999999999999998  899999999865532 22   25678999999999999998865 5899999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc------------CCCCchhhHH
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA------------LEGHTIYSAS  158 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~~~~y~~s  158 (238)
                      .....     ...+ .+..+++|+.++..+++++.+    .+ .+++|++||......            ..+...|+.+
T Consensus        78 ~~~~~-----~~~~-~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~s  146 (312)
T 2yy7_A           78 LLSAT-----AEKN-PAFAWDLNMNSLFHVLNLAKA----KK-IKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGIS  146 (312)
T ss_dssp             CCHHH-----HHHC-HHHHHHHHHHHHHHHHHHHHT----TS-CSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHH
T ss_pred             cCCCc-----hhhC-hHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHH
Confidence            75321     1233 677889999999999998854    23 469999999765322            2236789999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      |.+.+.+++.++.++   |++++.+.||.+..+.
T Consensus       147 K~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~  177 (312)
T 2yy7_A          147 KQAGERWCEYYHNIY---GVDVRSIRYPGLISWS  177 (312)
T ss_dssp             HHHHHHHHHHHHHHH---CCEEECEEECEEECSS
T ss_pred             HHHHHHHHHHHHHhc---CCcEEEEeCCeEecCC
Confidence            999999999988775   7999999999998864

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.78  E-value=1.2e-18  Score=144.79  Aligned_cols=201  Identities=14%  Similarity=0.055  Sum_probs=143.2

Q ss_pred             CCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHHHhhCCCceEEEeecCC-HHHHHHHHHhcCCccEEEEccCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQD-WARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      .++||||+|+||++++++|+++ |++|++++|+.++.+.+.. .+++.++.+|++| .+.++++++   ++|+|||+||.
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~---~~d~vih~A~~   77 (345)
T 2bll_A            2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN-HPHFHFVEGDISIHSEWIEYHVK---KCDVVLPLVAI   77 (345)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT-CTTEEEEECCTTTCSHHHHHHHH---HCSEEEECBCC
T ss_pred             eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc-CCCeEEEeccccCcHHHHHhhcc---CCCEEEEcccc
Confidence            4689999999999999999998 8999999998876544322 2468899999998 456777776   47999999997


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCC------------------CCc
Q psy14567         92 ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALE------------------GHT  153 (238)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------------~~~  153 (238)
                      ..+..    ..++ ++..+++|+.++..+++++.+    .+  +++|++||........                  +..
T Consensus        78 ~~~~~----~~~~-~~~~~~~n~~~~~~l~~~~~~----~~--~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~  146 (345)
T 2bll_A           78 ATPIE----YTRN-PLRVFELDFEENLRIIRYCVK----YR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRW  146 (345)
T ss_dssp             CCHHH----HHHS-HHHHHHHHTHHHHHHHHHHHH----TT--CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGG
T ss_pred             cCccc----hhcC-HHHHHHHHHHHHHHHHHHHHH----hC--CeEEEEecHHHcCCCCCCCcCCcccccccCcccCccc
Confidence            54211    1223 667889999999999888754    22  6999999965432111                  122


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC--------CCccCCcc---------cCCCCCCcC
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD--------PAKAGPML---------AKTPLGRFA  216 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~--------~~~~~~~~---------~~~~~~r~~  216 (238)
                      .|+.+|.+.+.+++.++.+.   |++++.+.||.+.++........        ..+.....         .......+.
T Consensus       147 ~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i  223 (345)
T 2bll_A          147 IYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFT  223 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECE
T ss_pred             ccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEE
Confidence            79999999999999998775   79999999999988764321000        00000001         111222466


Q ss_pred             CCCCcccccccccccc
Q psy14567        217 GKLKPKPWNRWLLPSV  232 (238)
Q Consensus       217 ~~~~ia~~~~~l~s~~  232 (238)
                      ..+|+|+++.+++.+.
T Consensus       224 ~v~Dva~a~~~~~~~~  239 (345)
T 2bll_A          224 DIRDGIEALYRIIENA  239 (345)
T ss_dssp             EHHHHHHHHHHHHHCG
T ss_pred             EHHHHHHHHHHHHhhc
Confidence            7889999988887653

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.78  E-value=1.6e-18  Score=142.61  Aligned_cols=154  Identities=18%  Similarity=0.223  Sum_probs=122.4

Q ss_pred             CCCCCCCCchHHHHHHHHhhC--CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQH--EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      ++||||+|+||++++++|++.  |++|++++|+.+..+       ++.++.+|++|++++.+++++. ++|+|||+||..
T Consensus         2 vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------~~~~~~~D~~d~~~~~~~~~~~-~~d~vih~a~~~   73 (317)
T 3ajr_A            2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------GIKFITLDVSNRDEIDRAVEKY-SIDAIFHLAGIL   73 (317)
T ss_dssp             EEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------TCCEEECCTTCHHHHHHHHHHT-TCCEEEECCCCC
T ss_pred             EEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------CceEEEecCCCHHHHHHHHhhc-CCcEEEECCccc
Confidence            679999999999999999998  889999988764421       4678899999999999998765 589999999975


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC------------CCCchhhHHHH
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL------------EGHTIYSASKA  160 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------~~~~~y~~sK~  160 (238)
                      ..     ...++ ++..+++|+.++..+++++.+    .+ .+++|++||.......            .+...|+.+|.
T Consensus        74 ~~-----~~~~~-~~~~~~~n~~~~~~l~~a~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~  142 (317)
T 3ajr_A           74 SA-----KGEKD-PALAYKVNMNGTYNILEAAKQ----HR-VEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKI  142 (317)
T ss_dssp             HH-----HHHHC-HHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHH
T ss_pred             CC-----ccccC-hHHHhhhhhHHHHHHHHHHHH----cC-CCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHH
Confidence            32     11233 677889999999999998864    23 4699999998754321            24679999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceec
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMT  190 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t  190 (238)
                      +.+.+++.++.+.   |++++.+.|+.+-.
T Consensus       143 ~~e~~~~~~~~~~---~~~~~~lR~~~~~g  169 (317)
T 3ajr_A          143 AAELLGQYYYEKF---GLDVRSLRYPGIIS  169 (317)
T ss_dssp             HHHHHHHHHHHHH---CCEEEEEEECEEEC
T ss_pred             HHHHHHHHHHHhc---CCeEEEEecCcEec
Confidence            9999999887764   79999997655544

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.77  E-value=1.4e-18  Score=146.05  Aligned_cols=204  Identities=12%  Similarity=0.076  Sum_probs=148.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHHHhhCCCceEEEeecC-CHHHHHHHHHhcCCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQ-DWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~-~~~~v~~~~~~~g~id~li~   87 (238)
                      ++++.++||||+|+||++++++|++. |++|++++|+.+..+.+.. .+++.++.+|++ +.+++.++++   ++|+|||
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~v~~~~~Dl~~d~~~~~~~~~---~~d~Vih   97 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-HERMHFFEGDITINKEWVEYHVK---KCDVILP   97 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-STTEEEEECCTTTCHHHHHHHHH---HCSEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-CCCeEEEeCccCCCHHHHHHHhc---cCCEEEE
Confidence            45677899999999999999999998 9999999999876655433 357999999999 9999998888   4799999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC------------------
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL------------------  149 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------  149 (238)
                      +||......    ..++ ....+++|+.++..+++++...    +  .++|++||.......                  
T Consensus        98 ~A~~~~~~~----~~~~-~~~~~~~nv~~~~~ll~a~~~~----~--~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~  166 (372)
T 3slg_A           98 LVAIATPAT----YVKQ-PLRVFELDFEANLPIVRSAVKY----G--KHLVFPSTSEVYGMCADEQFDPDASALTYGPIN  166 (372)
T ss_dssp             CBCCCCHHH----HHHC-HHHHHHHHTTTTHHHHHHHHHH----T--CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTT
T ss_pred             cCccccHHH----HhhC-HHHHHHHHHHHHHHHHHHHHHh----C--CcEEEeCcHHHhCCCCCCCCCccccccccCCCC
Confidence            999764321    1223 5667899999999998888543    2  589999996432110                  


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC--------CccCCcc---------cCCCC
Q psy14567        150 EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP--------AKAGPML---------AKTPL  212 (238)
Q Consensus       150 ~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~--------~~~~~~~---------~~~~~  212 (238)
                      .+...|+.+|.+.+.+++.++.+    |++++.+.|+.+..+.....+...        .+.....         .....
T Consensus       167 ~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  242 (372)
T 3slg_A          167 KPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQK  242 (372)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCE
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceE
Confidence            23347999999999999988765    799999999999887643211100        0000011         11122


Q ss_pred             CCcCCCCCcccccccccccc
Q psy14567        213 GRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       213 ~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ..+...+|+|+++.+++...
T Consensus       243 ~~~i~v~Dva~a~~~~~~~~  262 (372)
T 3slg_A          243 RAFTYVDDGISALMKIIENS  262 (372)
T ss_dssp             EECEEHHHHHHHHHHHHHCG
T ss_pred             EEEEEHHHHHHHHHHHHhcc
Confidence            24567889999998887654

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.77  E-value=2.7e-18  Score=140.58  Aligned_cols=196  Identities=14%  Similarity=0.066  Sum_probs=138.6

Q ss_pred             CCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHh--HHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEcc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNA   89 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~a   89 (238)
                      ++||||+|+||++++++|++.| ++|++++|+.+.  .+.+.    ++. +.+|+++.++++++++..  +++|+|||+|
T Consensus         2 vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~----~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a   76 (310)
T 1eq2_A            2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV----DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEG   76 (310)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH----TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECC
T ss_pred             EEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC----cce-eccccccHHHHHHHHhccccCCCcEEEECc
Confidence            6889999999999999999999 899999987654  22232    233 679999999888888642  3699999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-----------CCCCchhhHH
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-----------LEGHTIYSAS  158 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~y~~s  158 (238)
                      |....      ..++ ++..+++|+.++..+++++.+.    + . ++|++||......           ..+...|+.+
T Consensus        77 ~~~~~------~~~~-~~~~~~~n~~~~~~l~~a~~~~----~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~s  143 (310)
T 1eq2_A           77 ACSST------TEWD-GKYMMDNNYQYSKELLHYCLER----E-I-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYS  143 (310)
T ss_dssp             SCCCT------TCCC-HHHHHHHTHHHHHHHHHHHHHH----T-C-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHH
T ss_pred             ccccC------cccC-HHHHHHHHHHHHHHHHHHHHHc----C-C-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHH
Confidence            97643      1122 5677899999999999988642    3 4 9999999754321           1235689999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC--CC--CCcc---------CCcccCCC-CCCcCCCCCcccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW--SD--PAKA---------GPMLAKTP-LGRFAGKLKPKPW  224 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~--~~--~~~~---------~~~~~~~~-~~r~~~~~~ia~~  224 (238)
                      |.+.+.+++.++.+   .|++++.+.||.+.++......  ..  ..+.         ........ ...+...+|+|++
T Consensus       144 K~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~  220 (310)
T 1eq2_A          144 KFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADV  220 (310)
T ss_dssp             HHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHH
Confidence            99999999998765   3799999999999887643100  00  0000         00111112 3345677888888


Q ss_pred             ccccccc
Q psy14567        225 NRWLLPS  231 (238)
Q Consensus       225 ~~~l~s~  231 (238)
                      +..++.+
T Consensus       221 ~~~~~~~  227 (310)
T 1eq2_A          221 NLWFLEN  227 (310)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhc
Confidence            8877754

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.77  E-value=1.4e-19  Score=146.93  Aligned_cols=181  Identities=15%  Similarity=0.128  Sum_probs=133.3

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      .++||||+|+||++++++|+++|++|++++|.                 ++|++|.+++.++++.. ++|+|||+||...
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------~~D~~d~~~~~~~~~~~-~~d~vi~~a~~~~   68 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------LLDITNISQVQQVVQEI-RPHIIIHCAAYTK   68 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------TSCTTCHHHHHHHHHHH-CCSEEEECCCCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------ccCCCCHHHHHHHHHhc-CCCEEEECCcccC
Confidence            68999999999999999999999999999992                 38999999999999876 5899999999764


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-----------CCCCchhhHHHHHH
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-----------LEGHTIYSASKAAL  162 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~y~~sK~al  162 (238)
                      ...    ..++ ++..+++|+.++..+++++.+.    +  .++|++||.....+           ..+...|+.+|.+.
T Consensus        69 ~~~----~~~~-~~~~~~~n~~~~~~l~~~~~~~----~--~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~  137 (287)
T 3sc6_A           69 VDQ----AEKE-RDLAYVINAIGARNVAVASQLV----G--AKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAG  137 (287)
T ss_dssp             HHH----HTTC-HHHHHHHHTHHHHHHHHHHHHH----T--CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHH
T ss_pred             hHH----HhcC-HHHHHHHHHHHHHHHHHHHHHc----C--CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHH
Confidence            211    1123 6778899999999999998542    2  48999999764321           23467999999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCC-------CCCCcCCCCCcccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKT-------PLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.+++.++.       +.+.+.|+.+..+......  ..+........       ....+..++|+|+++.+++.+.
T Consensus       138 E~~~~~~~~-------~~~ilR~~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~  205 (287)
T 3sc6_A          138 EQFVKELHN-------KYFIVRTSWLYGKYGNNFV--KTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTS  205 (287)
T ss_dssp             HHHHHHHCS-------SEEEEEECSEECSSSCCHH--HHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSC
T ss_pred             HHHHHHhCC-------CcEEEeeeeecCCCCCcHH--HHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCC
Confidence            999987654       3478899999876432110  00000000011       2334567899999999888764

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.76  E-value=1e-17  Score=151.89  Aligned_cols=170  Identities=13%  Similarity=0.064  Sum_probs=130.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh----HHHHHh-hCCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN----LDSLKQ-AFPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      +.++++||||+|+||++++++|++.|++|++++|+...    .+++.. ...++.++.+|+++++++.++++++ ++|+|
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~~D~V   88 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-KIDSV   88 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-CCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-CCCEE
Confidence            44678999999999999999999999999999986532    222222 1346888999999999999998876 68999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc---------------cCC
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT---------------ALE  150 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------~~~  150 (238)
                      ||+||......    ..+. ....+++|+.++..+++++..    .+ .+++|++||.....               +..
T Consensus        89 ih~A~~~~~~~----~~~~-~~~~~~~Nv~gt~~ll~a~~~----~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~  158 (699)
T 1z45_A           89 IHFAGLKAVGE----STQI-PLRYYHNNILGTVVLLELMQQ----YN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLG  158 (699)
T ss_dssp             EECCSCCCHHH----HHHS-HHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC
T ss_pred             EECCcccCcCc----cccC-HHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEECcHHHhCCCccccccCCccccCCCC
Confidence            99999754211    1122 456789999999998887643    33 46999999976421               112


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        151 GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       151 ~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      +...|+.+|.+.+.+++.++.+. ..++++..+.|+.+..+.
T Consensus       159 p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~  199 (699)
T 1z45_A          159 PTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAH  199 (699)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCC
T ss_pred             CCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCC
Confidence            35789999999999999998775 358999999999887653

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.75  E-value=4.1e-18  Score=138.58  Aligned_cols=182  Identities=14%  Similarity=0.105  Sum_probs=132.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ..+.++||||+|+||++++++|+++|++|++++|+                 .+|++|++++.++++.. ++|+|||+||
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------~~Dl~d~~~~~~~~~~~-~~d~vih~A~   72 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------DLDITNVLAVNKFFNEK-KPNVVINCAA   72 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------TCCTTCHHHHHHHHHHH-CCSEEEECCC
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------cCCCCCHHHHHHHHHhc-CCCEEEECCc
Confidence            45678999999999999999999999999999996                 38999999999988865 5899999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-----------CCCchhhHHH
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-----------EGHTIYSASK  159 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----------~~~~~y~~sK  159 (238)
                      ....    +...++ ++..+++|+.++..+++++.+.    +  .++|++||.....+.           .+...|+.+|
T Consensus        73 ~~~~----~~~~~~-~~~~~~~nv~~~~~l~~a~~~~----~--~~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK  141 (292)
T 1vl0_A           73 HTAV----DKCEEQ-YDLAYKINAIGPKNLAAAAYSV----G--AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTK  141 (292)
T ss_dssp             CCCH----HHHHHC-HHHHHHHHTHHHHHHHHHHHHH----T--CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHH
T ss_pred             cCCH----HHHhcC-HHHHHHHHHHHHHHHHHHHHHc----C--CeEEEechHHeECCCCCCCCCCCCCCCCccHHHHHH
Confidence            7532    112344 7888999999999999998652    3  399999997643221           2457899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCc-------ccCCCCCCcCCCCCccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPM-------LAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~-------~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      .+.+.+++.++.       .+..+.|+.+..+ .....  ..+....       ........+..++|+|+++.+++++
T Consensus       142 ~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  210 (292)
T 1vl0_A          142 LEGENFVKALNP-------KYYIVRTAWLYGD-GNNFV--KTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDE  210 (292)
T ss_dssp             HHHHHHHHHHCS-------SEEEEEECSEESS-SSCHH--HHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhCC-------CeEEEeeeeeeCC-CcChH--HHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhc
Confidence            999999988653       2566777777755 21100  0000000       0011335567889999999888765

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.75  E-value=1.9e-18  Score=140.08  Aligned_cols=182  Identities=14%  Similarity=0.068  Sum_probs=134.7

Q ss_pred             CCCCCCCCCchHHHHHHHHhhC--CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQH--EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      +++||||+|+||++++++|++.  |++|++++|+.++.+++..  .++.++.+|++|++++.++++   ++|++||+||.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~--~~~~~~~~D~~d~~~l~~~~~---~~d~vi~~a~~   76 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD--QGVEVRHGDYNQPESLQKAFA---GVSKLLFISGP   76 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH--TTCEEEECCTTCHHHHHHHTT---TCSEEEECCCC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh--cCCeEEEeccCCHHHHHHHHh---cCCEEEEcCCC
Confidence            5789999999999999999998  9999999999877665543  367889999999999888876   48999999985


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHH
Q psy14567         92 ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMAL  171 (238)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~  171 (238)
                      ..       .  +      ++|+.++..+++++..    .+ .+++|++||.....   ....|+.+|.+.+.+++.   
T Consensus        77 ~~-------~--~------~~n~~~~~~l~~a~~~----~~-~~~~v~~Ss~~~~~---~~~~y~~~K~~~E~~~~~---  130 (287)
T 2jl1_A           77 HY-------D--N------TLLIVQHANVVKAARD----AG-VKHIAYTGYAFAEE---SIIPLAHVHLATEYAIRT---  130 (287)
T ss_dssp             CS-------C--H------HHHHHHHHHHHHHHHH----TT-CSEEEEEEETTGGG---CCSTHHHHHHHHHHHHHH---
T ss_pred             Cc-------C--c------hHHHHHHHHHHHHHHH----cC-CCEEEEECCCCCCC---CCCchHHHHHHHHHHHHH---
Confidence            21       1  1      4678888888887743    33 46999999987632   235899999999998863   


Q ss_pred             HhCCCCeEEEEEeCCceecCcccCCCC----CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        172 ELGPYNIRVNSVQPTVVMTQMGRTGWS----DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       172 ~~~~~~i~v~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                          .|++++.+.||++.++.......    .....  .........+..++|+|+++..++.+.
T Consensus       131 ----~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~Dva~~~~~~~~~~  189 (287)
T 2jl1_A          131 ----TNIPYTFLRNALYTDFFVNEGLRASTESGAIV--TNAGSGIVNSVTRNELALAAATVLTEE  189 (287)
T ss_dssp             ----TTCCEEEEEECCBHHHHSSGGGHHHHHHTEEE--ESCTTCCBCCBCHHHHHHHHHHHHTSS
T ss_pred             ----cCCCeEEEECCEeccccchhhHHHHhhCCcee--ccCCCCccCccCHHHHHHHHHHHhcCC
Confidence                47999999999987765211100    00000  111122346778999999999888763

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.75  E-value=6.1e-18  Score=140.71  Aligned_cols=201  Identities=9%  Similarity=-0.013  Sum_probs=137.8

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhH-HHHHh--hCCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANL-DSLKQ--AFPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      ..+++.++||||+|+||++++++|++.|++|++++|+.... +.+..  ...++.++.+|+.+..        +.++|+|
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~--------~~~~d~v   95 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL--------YIEVDQI   95 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC--------CCCCSEE
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh--------hcCCCEE
Confidence            34556789999999999999999999999999999864321 11111  1246888999998742        4579999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc----------------cC
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT----------------AL  149 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~  149 (238)
                      ||+||.......    .++ .+..+++|+.++..+++++.+.    +  .++|++||.....                +.
T Consensus        96 ih~A~~~~~~~~----~~~-~~~~~~~n~~~~~~l~~a~~~~----~--~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~  164 (343)
T 2b69_A           96 YHLASPASPPNY----MYN-PIKTLKTNTIGTLNMLGLAKRV----G--ARLLLASTSEVYGDPEVHPQSEDYWGHVNPI  164 (343)
T ss_dssp             EECCSCCSHHHH----TTC-HHHHHHHHHHHHHHHHHHHHHH----T--CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSS
T ss_pred             EECccccCchhh----hhC-HHHHHHHHHHHHHHHHHHHHHh----C--CcEEEECcHHHhCCCCCCCCcccccccCCCC
Confidence            999997542211    122 5667899999999999988642    2  4899999975431                22


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC--CCccCC---------cccCCCCCCcCCC
Q psy14567        150 EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD--PAKAGP---------MLAKTPLGRFAGK  218 (238)
Q Consensus       150 ~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~--~~~~~~---------~~~~~~~~r~~~~  218 (238)
                      .+...|+.+|.+.+.+++.++.+.   |++++.+.||.+.++........  ..+...         .........+...
T Consensus       165 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v  241 (343)
T 2b69_A          165 GPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYV  241 (343)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeH
Confidence            345679999999999999988765   78999999999998754211000  000000         0011122345678


Q ss_pred             CCccccccccccc
Q psy14567        219 LKPKPWNRWLLPS  231 (238)
Q Consensus       219 ~~ia~~~~~l~s~  231 (238)
                      +|+|+++..++..
T Consensus       242 ~Dva~a~~~~~~~  254 (343)
T 2b69_A          242 SDLVNGLVALMNS  254 (343)
T ss_dssp             HHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhc
Confidence            8889888877754

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.74  E-value=1.5e-17  Score=144.42  Aligned_cols=163  Identities=19%  Similarity=0.193  Sum_probs=125.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhC---CCEEEEecCChHhHH---HHHh----------------hCCCceEEEeecC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQH---EAIIIALSKTQANLD---SLKQ----------------AFPNVQTVQVDLQ   67 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~---G~~V~~~~r~~~~~~---~~~~----------------~~~~~~~~~~D~~   67 (238)
                      .++++++||||+|+||++++++|++.   |++|++++|+.+..+   .+.+                ...++.++.+|++
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            35678999999999999999999998   899999999865432   2211                1246899999998


Q ss_pred             ------CHHHHHHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEc
Q psy14567         68 ------DWARTRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS  141 (238)
Q Consensus        68 ------~~~~v~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~is  141 (238)
                            +.++++++++   ++|+|||+||.....        . ++..+++|+.++..+++++..    .+ .+++|++|
T Consensus       151 ~~~~gld~~~~~~~~~---~~D~Vih~Aa~~~~~--------~-~~~~~~~Nv~gt~~ll~aa~~----~~-~~~~V~iS  213 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAE---TVDLIVDSAAMVNAF--------P-YHELFGPNVAGTAELIRIALT----TK-LKPFTYVS  213 (478)
T ss_dssp             SGGGGCCHHHHHHHHH---HCCEEEECCSSCSBS--------S-CCEEHHHHHHHHHHHHHHHTS----SS-CCCEEEEE
T ss_pred             CcccCCCHHHHHHHHc---CCCEEEECccccCCc--------C-HHHHHHHHHHHHHHHHHHHHh----CC-CCeEEEEe
Confidence                  6677777777   489999999986531        1 344568999999999888743    33 45899999


Q ss_pred             cccccccCCC----------------------CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        142 SIAGKTALEG----------------------HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       142 S~~~~~~~~~----------------------~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      |.........                      ...|+.+|.+.+.+++.++.+.   |++++.+.||.+-.+.
T Consensus       214 S~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~  283 (478)
T 4dqv_A          214 TADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADT  283 (478)
T ss_dssp             EGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCS
T ss_pred             ehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCC
Confidence            9654221110                      1349999999999999988765   7999999999998764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.74  E-value=1.9e-17  Score=136.37  Aligned_cols=152  Identities=15%  Similarity=0.078  Sum_probs=120.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      +.++||||+|+||++++++|++.|++|+++.|+.                .+|++|.+++.++++.. ++|+|||+||..
T Consensus         4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------~~D~~d~~~~~~~~~~~-~~d~vih~a~~~   66 (321)
T 1e6u_A            4 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------ELNLLDSRAVHDFFASE-RIDQVYLAAAKV   66 (321)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------TCCTTCHHHHHHHHHHH-CCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------cCCccCHHHHHHHHHhc-CCCEEEEcCeec
Confidence            4578999999999999999999999999888763                27999999999988765 589999999965


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc---------------CCC-Cchhh
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA---------------LEG-HTIYS  156 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------~~~-~~~y~  156 (238)
                      ...   .....+ .+..+++|+.++..+++++.+    .+ .+++|++||......               ..+ ...|+
T Consensus        67 ~~~---~~~~~~-~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~  137 (321)
T 1e6u_A           67 GGI---VANNTY-PADFIYQNMMIESNIIHAAHQ----ND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYA  137 (321)
T ss_dssp             CCH---HHHHHC-HHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHH
T ss_pred             CCc---chhhhC-HHHHHHHHHHHHHHHHHHHHH----hC-CCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccH
Confidence            311   111233 567789999999999998864    23 459999999765321               111 24899


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~  193 (238)
                      .+|.+.+.+++.++.+.   |++++.+.||.+..+..
T Consensus       138 ~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~  171 (321)
T 1e6u_A          138 IAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD  171 (321)
T ss_dssp             HHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred             HHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCC
Confidence            99999999999988765   79999999999988754

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.74  E-value=1.3e-17  Score=136.05  Aligned_cols=190  Identities=12%  Similarity=-0.023  Sum_probs=129.3

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhH--HHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANL--DSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~--~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      .++++||||||+||++++++|++.| ++|++++|+.++.  +.+..  .++.++.+|++|++++.++++   .+|++||+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~--~~~~~~~~D~~d~~~l~~~~~---~~d~vi~~   79 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRL--QGAEVVQGDQDDQVIMELALN---GAYATFIV   79 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHH--TTCEEEECCTTCHHHHHHHHT---TCSEEEEC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHH--CCCEEEEecCCCHHHHHHHHh---cCCEEEEe
Confidence            3578999999999999999999999 9999999987654  23322  368899999999999988887   48999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc--cCCCCchhhHHHHHHHHHH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT--ALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~y~~sK~al~~l~  166 (238)
                      +|.....        .     .+.|+.+...++++    +.+.+ .+++|++|+.....  .......|+.+|.+++.++
T Consensus        80 a~~~~~~--------~-----~~~~~~~~~~~~~a----a~~~g-v~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~  141 (299)
T 2wm3_A           80 TNYWESC--------S-----QEQEVKQGKLLADL----ARRLG-LHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYF  141 (299)
T ss_dssp             CCHHHHT--------C-----HHHHHHHHHHHHHH----HHHHT-CSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHH
T ss_pred             CCCCccc--------c-----chHHHHHHHHHHHH----HHHcC-CCEEEEEcCccccccCCCcccCchhhHHHHHHHHH
Confidence            9853210        0     12344444444444    44444 56899966543221  1123468999999999988


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccC-CcccCCC----CCCcCCCCCccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAG-PMLAKTP----LGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~-~~~~~~~----~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +.       .|++++.+.||++.+++............ ...-..|    ...+..++|+|+++..++.+
T Consensus       142 ~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~  204 (299)
T 2wm3_A          142 RD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKM  204 (299)
T ss_dssp             HH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHS
T ss_pred             HH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcC
Confidence            65       27999999999999886542211100000 0000111    22457899999999988875

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.72  E-value=2.5e-17  Score=148.39  Aligned_cols=203  Identities=15%  Similarity=0.071  Sum_probs=144.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHH-HHHHHHhcCCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWAR-TRAAVSKVGPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~g~id~li~~   88 (238)
                      ++++++||||+|+||++++++|++. |++|++++|+.+..+++. ...++.++.+|+++.++ ++++++   ++|+|||+
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-~~~~v~~v~~Dl~d~~~~~~~~~~---~~D~Vih~  389 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-NHPHFHFVEGDISIHSEWIEYHVK---KCDVVLPL  389 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-TCTTEEEEECCTTTCHHHHHHHHH---HCSEEEEC
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-cCCceEEEECCCCCcHHHHHHhhc---CCCEEEEC
Confidence            4457899999999999999999998 899999999876644332 13468899999998765 666766   47999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC------------------C
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL------------------E  150 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------~  150 (238)
                      ||.....    ....+ .+..+++|+.++..+++++.+    .+  +++|++||.......                  .
T Consensus       390 Aa~~~~~----~~~~~-~~~~~~~Nv~gt~~ll~aa~~----~~--~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~  458 (660)
T 1z7e_A          390 VAIATPI----EYTRN-PLRVFELDFEENLRIIRYCVK----YR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNK  458 (660)
T ss_dssp             CCCCCTH----HHHHS-HHHHHHHHTHHHHHHHHHHHH----TT--CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTC
T ss_pred             ceecCcc----ccccC-HHHHHHhhhHHHHHHHHHHHH----hC--CEEEEEecHHHcCCCCCcccCCCccccccCcccC
Confidence            9975421    11233 677889999999999888854    22  699999997653211                  1


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCC----CCC----CCccCCcccCC---------CCC
Q psy14567        151 GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG----WSD----PAKAGPMLAKT---------PLG  213 (238)
Q Consensus       151 ~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~----~~~----~~~~~~~~~~~---------~~~  213 (238)
                      +...|+.+|.+.+.+++.++.+.   |++++.+.||.+.++.....    ...    ..+........         ...
T Consensus       459 p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~  535 (660)
T 1z7e_A          459 PRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKR  535 (660)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEE
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEE
Confidence            22379999999999999998775   79999999999998764210    000    01111111111         222


Q ss_pred             CcCCCCCccccccccccc
Q psy14567        214 RFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       214 r~~~~~~ia~~~~~l~s~  231 (238)
                      .+..++|+|+++.+++.+
T Consensus       536 ~~i~v~Dva~ai~~~l~~  553 (660)
T 1z7e_A          536 CFTDIRDGIEALYRIIEN  553 (660)
T ss_dssp             ECEEHHHHHHHHHHHHHC
T ss_pred             EEEEHHHHHHHHHHHHhC
Confidence            356788999998888765

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.72  E-value=4.2e-18  Score=149.03  Aligned_cols=200  Identities=12%  Similarity=0.018  Sum_probs=140.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhH---HHHH-------------hhCCCceEEEeecCCHHHHHH
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANL---DSLK-------------QAFPNVQTVQVDLQDWARTRA   74 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~-------------~~~~~~~~~~~D~~~~~~v~~   74 (238)
                      .+++++||||||+||.+++++|.+.|++|++++|+.+..   +.+.             ...+++.++.+|+++++++. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            456899999999999999999999999999999987632   1111             12357999999999977766 


Q ss_pred             HHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccc--cc-----
Q psy14567         75 AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAG--KT-----  147 (238)
Q Consensus        75 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~-----  147 (238)
                         ...++|+|||+|+....       ..+ +...+++|+.++..+++++.+     + ..++|++||...  ..     
T Consensus       228 ---~~~~~D~Vih~Aa~~~~-------~~~-~~~~~~~Nv~gt~~ll~~a~~-----~-~~~~v~iSS~~vG~~~~~~~~  290 (508)
T 4f6l_B          228 ---LPENMDTIIHAGARTDH-------FGD-DDEFEKVNVQGTVDVIRLAQQ-----H-HARLIYVSTISVGTYFDIDTE  290 (508)
T ss_dssp             ---CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT-----T-TCEEEEEEESCTTSEECTTCS
T ss_pred             ---CccCCCEEEECCceecC-------CCC-HHHHhhhHHHHHHHHHHHHHh-----C-CCcEEEeCChhhccCCccCCc
Confidence               44679999999997631       112 466678999999999998865     2 469999999776  00     


Q ss_pred             -----------cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC-------CccCCcccC
Q psy14567        148 -----------ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP-------AKAGPMLAK  209 (238)
Q Consensus       148 -----------~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~-------~~~~~~~~~  209 (238)
                                 +..+...|+.+|.+.+.+++.++.    .|++++.+.||.+..+.....+...       .+.......
T Consensus       291 ~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~  366 (508)
T 4f6l_B          291 DVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQL  366 (508)
T ss_dssp             CCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTC
T ss_pred             CcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHc
Confidence                       012467899999999999988654    4899999999999887654321111       000001110


Q ss_pred             --CC------CCCcCCCCCcccccccccccc
Q psy14567        210 --TP------LGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       210 --~~------~~r~~~~~~ia~~~~~l~s~~  232 (238)
                        .|      ..-+...+|+|+++++++.+.
T Consensus       367 ~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~  397 (508)
T 4f6l_B          367 DCIGVSMAEMPVDFSFVDTTARQIVALAQVN  397 (508)
T ss_dssp             SEEETTGGGSEEECEEHHHHHHHHHHHTTBC
T ss_pred             CCCCCCccCceEEEEcHHHHHHHHHHHHhCC
Confidence              11      112456788999988887654

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.70  E-value=8.3e-19  Score=144.26  Aligned_cols=195  Identities=14%  Similarity=-0.000  Sum_probs=132.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH----hHHHHHhh--CCCceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA----NLDSLKQA--FPNVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      .+++++||||+|+||++++++|++.|++|++++|+.+    ..+.+...  ..++.++.+|++             ++|+
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-------------~~d~   72 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-------------DVRL   72 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-------------TEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-------------cCCE
Confidence            3567899999999999999999999999999999875    22222111  123555566665             6899


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCCCc
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEGHT  153 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~  153 (238)
                      |||+||........+.     ....++ |+.++..+++++.+.    + ..++|++||.....           +..+..
T Consensus        73 vi~~a~~~~~~~~~~~-----~~~~~~-n~~~~~~ll~a~~~~----~-v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~  141 (321)
T 3vps_A           73 VYHLASHKSVPRSFKQ-----PLDYLD-NVDSGRHLLALCTSV----G-VPKVVVGSTCEVYGQADTLPTPEDSPLSPRS  141 (321)
T ss_dssp             EEECCCCCCHHHHTTS-----TTTTHH-HHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             EEECCccCChHHHHhC-----HHHHHH-HHHHHHHHHHHHHHc----C-CCeEEEecCHHHhCCCCCCCCCCCCCCCCCC
Confidence            9999997643211111     122345 999999998888543    2 36999999976432           123467


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCe-EEEEEeCCceecCcccCCCCCCCccCC---------cccCCCCCCcCCCCCccc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNI-RVNSVQPTVVMTQMGRTGWSDPAKAGP---------MLAKTPLGRFAGKLKPKP  223 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i-~v~~i~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~~r~~~~~~ia~  223 (238)
                      .|+.+|.+.+.+++.++.+   .|+ +++.+.|+.+.++..........+...         .........+...+|+|+
T Consensus       142 ~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~  218 (321)
T 3vps_A          142 PYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVD  218 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHH
Confidence            8999999999999998876   378 999999999988754321000001000         111112234568889999


Q ss_pred             ccccccccc
Q psy14567        224 WNRWLLPSV  232 (238)
Q Consensus       224 ~~~~l~s~~  232 (238)
                      ++.+++.+.
T Consensus       219 ~~~~~~~~~  227 (321)
T 3vps_A          219 KLVALANRP  227 (321)
T ss_dssp             HHHHGGGSC
T ss_pred             HHHHHHhcC
Confidence            999988764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.70  E-value=7.1e-19  Score=142.76  Aligned_cols=187  Identities=9%  Similarity=-0.006  Sum_probs=132.3

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      ++.++||| +|+||++++++|++.|++|++++|+.+..      .+++.++.+|++|++++.++++  +++|+|||+||.
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~Dl~d~~~~~~~~~--~~~d~vih~a~~   73 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------PAGVQTLIADVTRPDTLASIVH--LRPEILVYCVAA   73 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------CTTCCEEECCTTCGGGCTTGGG--GCCSEEEECHHH
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------ccCCceEEccCCChHHHHHhhc--CCCCEEEEeCCC
Confidence            45688999 59999999999999999999999987652      2578899999999988877776  369999999986


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCCCchhhHHHH
Q psy14567         92 ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEGHTIYSASKA  160 (238)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~y~~sK~  160 (238)
                      ..         .+ .+..+++|+.++..+++++.    +.+ .+++|++||.....           +..+...|+.+|.
T Consensus        74 ~~---------~~-~~~~~~~n~~~~~~ll~a~~----~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~  138 (286)
T 3gpi_A           74 SE---------YS-DEHYRLSYVEGLRNTLSALE----GAP-LQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRML  138 (286)
T ss_dssp             HH---------HC------CCSHHHHHHHHHHTT----TSC-CCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHH
T ss_pred             CC---------CC-HHHHHHHHHHHHHHHHHHHh----hCC-CCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHH
Confidence            32         22 45667899999988888874    333 46999999976422           2234679999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +.+.+ +..        ++++.+.|+.+..+........-..............+...+|+|+++.+++.+
T Consensus       139 ~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  200 (286)
T 3gpi_A          139 EAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQ  200 (286)
T ss_dssp             HHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHH
T ss_pred             HHHHH-Hhc--------CCeEEEecccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhh
Confidence            99888 442        788999999998875431100000000011112233456788999999888776

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.69  E-value=5.8e-17  Score=132.11  Aligned_cols=183  Identities=15%  Similarity=0.041  Sum_probs=131.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      .++||||+|+||++++++|+ +|++|++++|+..             .+.+|++|++++.++++.. ++|+|||+||...
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------~~~~D~~d~~~~~~~~~~~-~~d~vih~a~~~~   66 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------EFCGDFSNPKGVAETVRKL-RPDVIVNAAAHTA   66 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------SSCCCTTCHHHHHHHHHHH-CCSEEEECCCCCC
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------cccccCCCHHHHHHHHHhc-CCCEEEECcccCC
Confidence            36899999999999999999 8999999999861             3579999999999988765 5899999999653


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-----------CCCCchhhHHHHHH
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-----------LEGHTIYSASKAAL  162 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~y~~sK~al  162 (238)
                      ..    ...++ ++..+++|+.++..+++++.+    .+  .++|++||.....+           ..+...|+.+|.+.
T Consensus        67 ~~----~~~~~-~~~~~~~n~~~~~~l~~a~~~----~~--~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~  135 (299)
T 1n2s_A           67 VD----KAESE-PELAQLLNATSVEAIAKAANE----TG--AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAG  135 (299)
T ss_dssp             HH----HHTTC-HHHHHHHHTHHHHHHHHHHTT----TT--CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHH
T ss_pred             Hh----hhhcC-HHHHHHHHHHHHHHHHHHHHH----cC--CcEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHH
Confidence            21    11122 567789999999999998742    22  48999999764322           22356899999999


Q ss_pred             HHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCC-------CCCCcCCCCCccccccccccc
Q psy14567        163 DSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKT-------PLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       163 ~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~-------~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +.+++.++.       +++.+.||.+.++......  ..+........       ...-+..++|+|+++.+++.+
T Consensus       136 E~~~~~~~~-------~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  202 (299)
T 1n2s_A          136 EKALQDNCP-------KHLIFRTSWVYAGKGNNFA--KTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRV  202 (299)
T ss_dssp             HHHHHHHCS-------SEEEEEECSEECSSSCCHH--HHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCC-------CeEEEeeeeecCCCcCcHH--HHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHH
Confidence            999987642       6889999999887532110  00000000111       122345688999998888764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.69  E-value=6.4e-17  Score=132.47  Aligned_cols=195  Identities=17%  Similarity=0.090  Sum_probs=134.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +++.++||||+|+||++++++|++.|+      +..       .....+..+.+|++|++++.++++.. ++|+|||+|+
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~-------~~~~~~~~~~~D~~d~~~~~~~~~~~-~~d~Vih~A~   70 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAG------LPG-------EDWVFVSSKDADLTDTAQTRALFEKV-QPTHVIHLAA   70 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTC------CTT-------CEEEECCTTTCCTTSHHHHHHHHHHS-CCSEEEECCC
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCC------ccc-------ccccccCceecccCCHHHHHHHHhhc-CCCEEEECce
Confidence            456788999999999999999999997      111       01112344578999999999999875 5899999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc---------------C-CCCch
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA---------------L-EGHTI  154 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------~-~~~~~  154 (238)
                      ......   ...++ ....+++|+.++..+++++..    .+ ..++|++||......               . +....
T Consensus        71 ~~~~~~---~~~~~-~~~~~~~nv~gt~~ll~a~~~----~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~  141 (319)
T 4b8w_A           71 MVGGLF---RNIKY-NLDFWRKNVHMNDNVLHSAFE----VG-ARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFG  141 (319)
T ss_dssp             CCCCHH---HHTTC-HHHHHHHHHHHHHHHHHHHHH----TT-CSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHH
T ss_pred             eccccc---ccccC-HHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEEcchhhcCCCCCCCccccccccCCCCCCcch
Confidence            753111   11122 566789999999999988753    23 458999999854211               1 11226


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC----CccCC----c---------ccCCCCCCcCC
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP----AKAGP----M---------LAKTPLGRFAG  217 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~----~~~~~----~---------~~~~~~~r~~~  217 (238)
                      |+.+|.+.+.+++.++.+.   |++++.+.|+.+..+.........    .+...    .         ........+..
T Consensus       142 Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~  218 (319)
T 4b8w_A          142 YSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIY  218 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEE
T ss_pred             HHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEe
Confidence            9999999999999988776   799999999999887643211000    00111    0         11122234567


Q ss_pred             CCCccccccccccc
Q psy14567        218 KLKPKPWNRWLLPS  231 (238)
Q Consensus       218 ~~~ia~~~~~l~s~  231 (238)
                      .+|+|+++..++.+
T Consensus       219 v~Dva~a~~~~~~~  232 (319)
T 4b8w_A          219 SLDLAQLFIWVLRE  232 (319)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc
Confidence            88999998888765

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.68  E-value=7.7e-17  Score=131.86  Aligned_cols=185  Identities=14%  Similarity=0.056  Sum_probs=121.5

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh-------HhHHHHHh-hCCCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ-------ANLDSLKQ-AFPNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~-------~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      +++++||||||+||++++++|++.|++|++++|+.       ++.+.+.. ...++.++++|++|++++.++++   .+|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~---~~d   78 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK---QVD   78 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT---TCS
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh---CCC
Confidence            45689999999999999999999999999999986       44443322 12468899999999999988887   489


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----cCCCCchhhHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----ALEGHTIYSAS  158 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----~~~~~~~y~~s  158 (238)
                      +|||++|...                    +.+...+++++    .+.+.-+++|. |+.....     ..+....| .+
T Consensus        79 ~vi~~a~~~~--------------------~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~s  132 (307)
T 2gas_A           79 IVICAAGRLL--------------------IEDQVKIIKAI----KEAGNVKKFFP-SEFGLDVDRHDAVEPVRQVF-EE  132 (307)
T ss_dssp             EEEECSSSSC--------------------GGGHHHHHHHH----HHHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH-HH
T ss_pred             EEEECCcccc--------------------cccHHHHHHHH----HhcCCceEEee-cccccCcccccCCCcchhHH-HH
Confidence            9999998642                    11223334443    23221246662 3332111     11223578 99


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC------CccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP------AKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |.+++.+++.       .|++++.+.||++.+++........      ..............+..++|+|+++..++.+.
T Consensus       133 K~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  205 (307)
T 2gas_A          133 KASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDP  205 (307)
T ss_dssp             HHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCG
T ss_pred             HHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCc
Confidence            9999887763       2688999999999887643321110      00000111122334678899999999888764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.67  E-value=2.5e-16  Score=127.49  Aligned_cols=179  Identities=11%  Similarity=0.014  Sum_probs=126.8

Q ss_pred             CCCCCCCCchHHHHHHHHhhC--CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQH--EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      ++||||+|+||++++++|+++  |++|++++|+.++.+++..  .++.++.+|++|++++.++++   .+|++||+||..
T Consensus         2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~---~~d~vi~~a~~~   76 (286)
T 2zcu_A            2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA--QGITVRQADYGDEAALTSALQ---GVEKLLLISSSE   76 (286)
T ss_dssp             EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH--TTCEEEECCTTCHHHHHHHTT---TCSEEEECC---
T ss_pred             EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc--CCCeEEEcCCCCHHHHHHHHh---CCCEEEEeCCCC
Confidence            678999999999999999998  9999999999877665543  367889999999999888876   479999999852


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHH
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALE  172 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~  172 (238)
                      .                 +.|+.++..+++++.    +.+ .+++|++||....   +....|+.+|.+.+.+++.    
T Consensus        77 ~-----------------~~~~~~~~~l~~a~~----~~~-~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~~~~~----  127 (286)
T 2zcu_A           77 V-----------------GQRAPQHRNVINAAK----AAG-VKFIAYTSLLHAD---TSPLGLADEHIETEKMLAD----  127 (286)
T ss_dssp             ----------------------CHHHHHHHHHH----HHT-CCEEEEEEETTTT---TCCSTTHHHHHHHHHHHHH----
T ss_pred             c-----------------hHHHHHHHHHHHHHH----HcC-CCEEEEECCCCCC---CCcchhHHHHHHHHHHHHH----
Confidence            1                 024445555555553    333 4699999998764   2235899999999998864    


Q ss_pred             hCCCCeEEEEEeCCceecCcccCCC---CCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        173 LGPYNIRVNSVQPTVVMTQMGRTGW---SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       173 ~~~~~i~v~~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                         .|++++.+.||++.+++.....   .....  ..........+..++|+|+++.+++.+.
T Consensus       128 ---~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~~~  185 (286)
T 2zcu_A          128 ---SGIVYTLLRNGWYSENYLASAPAALEHGVF--IGAAGDGKIASATRADYAAAAARVISEA  185 (286)
T ss_dssp             ---HCSEEEEEEECCBHHHHHTTHHHHHHHTEE--EESCTTCCBCCBCHHHHHHHHHHHHHSS
T ss_pred             ---cCCCeEEEeChHHhhhhHHHhHHhhcCCce--eccCCCCccccccHHHHHHHHHHHhcCC
Confidence               3799999999998776431100   00000  0111123345778999999999988763

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.65  E-value=3.7e-16  Score=130.16  Aligned_cols=189  Identities=7%  Similarity=-0.029  Sum_probs=128.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh----HhHHHHHhh-CCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ----ANLDSLKQA-FPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      ..++++||||||+||++++++|++.|++|++++|+.    ++.+.+... ..++.++.+|++|.+++.+++++. ++|+|
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~-~~d~V   87 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH-EIDIV   87 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-TCCEE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-CCCEE
Confidence            345789999999999999999999999999999976    344322221 247899999999999999999865 48999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc----cCCCCchhhHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT----ALEGHTIYSASKAA  161 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~~~~~~~y~~sK~a  161 (238)
                      ||++|..                    |+.+...+++++...    +.-.++++ |+.....    +.++...|+.+|.+
T Consensus        88 i~~a~~~--------------------n~~~~~~l~~aa~~~----g~v~~~v~-S~~g~~~~e~~~~~p~~~y~~sK~~  142 (346)
T 3i6i_A           88 VSTVGGE--------------------SILDQIALVKAMKAV----GTIKRFLP-SEFGHDVNRADPVEPGLNMYREKRR  142 (346)
T ss_dssp             EECCCGG--------------------GGGGHHHHHHHHHHH----CCCSEEEC-SCCSSCTTTCCCCTTHHHHHHHHHH
T ss_pred             EECCchh--------------------hHHHHHHHHHHHHHc----CCceEEee-cccCCCCCccCcCCCcchHHHHHHH
Confidence            9999862                    444556666666432    21235654 4443221    22445789999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC------CccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP------AKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+.+++.       .|++++.+.||++............      ..............+...+|+|+++..++.+.
T Consensus       143 ~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~  212 (346)
T 3i6i_A          143 VRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDV  212 (346)
T ss_dssp             HHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCG
T ss_pred             HHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCc
Confidence            8887765       4789999999999775533221110      00001111222334678899999999888764

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.65  E-value=1.8e-15  Score=126.36  Aligned_cols=149  Identities=11%  Similarity=0.022  Sum_probs=111.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhH--HHHHhhCCCceEEEee-cCCHHHHHHHHHhcCCccEEEEc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANL--DSLKQAFPNVQTVQVD-LQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~D-~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      .++++||||||+||++++++|++.|++|++++|+.+..  +++.. .+++.++.+| ++|++++.++++   .+|++|||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~---~~d~Vi~~   80 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA-IPNVTLFQGPLLNNVPLMDTLFE---GAHLAFIN   80 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT-STTEEEEESCCTTCHHHHHHHHT---TCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh-cCCcEEEECCccCCHHHHHHHHh---cCCEEEEc
Confidence            35689999999999999999999999999999987664  33432 2468889999 999999988887   47999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccc-ccccCCCCchhhHHHHHHHHHHH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIA-GKTALEGHTIYSASKAALDSITR  167 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~-~~~~~~~~~~y~~sK~al~~l~~  167 (238)
                      ++....                +.|..+ ..+++++    .+.+..+++|++||.. +..+......|+.+|.+.+.+++
T Consensus        81 a~~~~~----------------~~~~~~-~~l~~aa----~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~  139 (352)
T 1xgk_A           81 TTSQAG----------------DEIAIG-KDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVR  139 (352)
T ss_dssp             CCSTTS----------------CHHHHH-HHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHH
T ss_pred             CCCCCc----------------HHHHHH-HHHHHHH----HHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHH
Confidence            975420                123333 4444444    3332126999999986 33344455789999999999887


Q ss_pred             HHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        168 TMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       168 ~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      .+       |++++.+.||++.+..
T Consensus       140 ~~-------gi~~~ivrpg~~g~~~  157 (352)
T 1xgk_A          140 QL-------GLPSTFVYAGIYNNNF  157 (352)
T ss_dssp             TS-------SSCEEEEEECEEGGGC
T ss_pred             Hc-------CCCEEEEecceecCCc
Confidence            52       7999999999876554

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.65  E-value=5.5e-17  Score=131.76  Aligned_cols=183  Identities=11%  Similarity=-0.009  Sum_probs=122.0

Q ss_pred             CCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      .++||||||+||++++++|++. |++|++++|+.++.+.+..  .++.++.+|++|++++.++++   ++|+|||++|..
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~--~~v~~~~~D~~d~~~l~~~~~---~~d~vi~~a~~~   76 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR--GKVSVRQLDYFNQESMVEAFK---GMDTVVFIPSII   76 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGB--TTBEEEECCTTCHHHHHHHTT---TCSEEEECCCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhh--CCCEEEEcCCCCHHHHHHHHh---CCCEEEEeCCCC
Confidence            4789999999999999999988 9999999999887554432  468999999999999888877   579999999865


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHH
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALE  172 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~  172 (238)
                      ..        .       ..|+.++..+++++    .+.+ -+++|++||......    ..|..++...     .+...
T Consensus        77 ~~--------~-------~~~~~~~~~l~~aa----~~~g-v~~iv~~Ss~~~~~~----~~~~~~~~~~-----~~e~~  127 (289)
T 3e48_A           77 HP--------S-------FKRIPEVENLVYAA----KQSG-VAHIIFIGYYADQHN----NPFHMSPYFG-----YASRL  127 (289)
T ss_dssp             CS--------H-------HHHHHHHHHHHHHH----HHTT-CCEEEEEEESCCSTT----CCSTTHHHHH-----HHHHH
T ss_pred             cc--------c-------hhhHHHHHHHHHHH----HHcC-CCEEEEEcccCCCCC----CCCccchhHH-----HHHHH
Confidence            31        0       12444554444444    4444 469999999764322    2233333211     22223


Q ss_pred             hCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCC----CcCCCCCccccccccccccc
Q psy14567        173 LGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLG----RFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       173 ~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~----r~~~~~~ia~~~~~l~s~~~  233 (238)
                      +...|++++.+.||++.+++....   ...........|.+    .+..++|+|+++.+++++..
T Consensus       128 ~~~~g~~~~ilrp~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~  189 (289)
T 3e48_A          128 LSTSGIDYTYVRMAMYMDPLKPYL---PELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPD  189 (289)
T ss_dssp             HHHHCCEEEEEEECEESTTHHHHH---HHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGG
T ss_pred             HHHcCCCEEEEeccccccccHHHH---HHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCC
Confidence            334589999999999988754210   00000000111222    26789999999999987653

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.64  E-value=7.5e-16  Score=126.29  Aligned_cols=189  Identities=12%  Similarity=0.039  Sum_probs=123.3

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh-----HhHHHHHh-hCCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ-----ANLDSLKQ-AFPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      ++.++||||||+||++++++|++.|++|++++|+.     ++.+.+.. ...++.++.+|++|++++.++++   ++|+|
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~---~~d~v   80 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK---QVDVV   80 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT---TCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh---CCCEE
Confidence            45689999999999999999999999999999983     34433322 23468899999999999988887   48999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc------CCCCchhhHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA------LEGHTIYSASK  159 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------~~~~~~y~~sK  159 (238)
                      ||++|......                |+.+...+++++    .+.+.-+++|+ |+......      .+....| .+|
T Consensus        81 i~~a~~~~~~~----------------~~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~y-~sK  138 (313)
T 1qyd_A           81 ISALAGGVLSH----------------HILEQLKLVEAI----KEAGNIKRFLP-SEFGMDPDIMEHALQPGSITF-IDK  138 (313)
T ss_dssp             EECCCCSSSST----------------TTTTHHHHHHHH----HHSCCCSEEEC-SCCSSCTTSCCCCCSSTTHHH-HHH
T ss_pred             EECCccccchh----------------hHHHHHHHHHHH----HhcCCCceEEe-cCCcCCccccccCCCCCcchH-HHH
Confidence            99999754211                233444444544    33321247764 44332111      1234578 999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-------CCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-------PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+++.+++.       .|++++.+.||++.+++.......       ...............+..++|+|+++..++.+.
T Consensus       139 ~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~  211 (313)
T 1qyd_A          139 RKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP  211 (313)
T ss_dssp             HHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG
T ss_pred             HHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCc
Confidence            999887752       368888999999977543321111       000001111112234568899999998888764

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.64  E-value=1.5e-15  Score=123.04  Aligned_cols=180  Identities=8%  Similarity=-0.061  Sum_probs=123.9

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      +.++|||| |.||++++++|+++|++|++++|+.++.+.+..  .+++++.+|++|.+        +.++|+|||+|+..
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~d~~--------~~~~d~vi~~a~~~   74 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--SGAEPLLWPGEEPS--------LDGVTHLLISTAPD   74 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--TTEEEEESSSSCCC--------CTTCCEEEECCCCB
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--CCCeEEEecccccc--------cCCCCEEEECCCcc
Confidence            46899998 999999999999999999999999988777654  36889999999833        55799999999965


Q ss_pred             CCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCceEEEEccccccc-----------cCCCCchhhHHH
Q psy14567         93 RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMID--HKIQGSIVNVSSIAGKT-----------ALEGHTIYSASK  159 (238)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~g~iv~isS~~~~~-----------~~~~~~~y~~sK  159 (238)
                      ...     +  . .              .+.++..+.+  .+ ..++|++||.....           +..+...|+.+|
T Consensus        75 ~~~-----~--~-~--------------~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK  131 (286)
T 3ius_A           75 SGG-----D--P-V--------------LAALGDQIAARAAQ-FRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWR  131 (286)
T ss_dssp             TTB-----C--H-H--------------HHHHHHHHHHTGGG-CSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHH
T ss_pred             ccc-----c--H-H--------------HHHHHHHHHhhcCC-ceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHH
Confidence            321     1  1 1              1222233333  23 46999999875421           223356899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCC-ccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPA-KAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+.+.+++.+      .+++++.+.||.+..+.......... ............-+...+|+|+++..++.+.
T Consensus       132 ~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~  199 (286)
T 3ius_A          132 VMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARP  199 (286)
T ss_dssp             HHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCC
Confidence            9999998876      58999999999998875332110000 0000011112234566789999988887664

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.61  E-value=2.1e-16  Score=130.17  Aligned_cols=185  Identities=8%  Similarity=-0.029  Sum_probs=118.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh------HhHHHHHh-hCCCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ------ANLDSLKQ-AFPNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      .+++++||||+|+||++++++|++.|++|++++|+.      ++.+.+.. ...++.++.+|++|++++.++++   .+|
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~---~~d   79 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK---QVD   79 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT---TCS
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc---CCC
Confidence            356789999999999999999999999999999986      23333221 12468899999999999998887   489


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc---C---CCCchhhH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA---L---EGHTIYSA  157 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---~---~~~~~y~~  157 (238)
                      +|||++|...                    +.+...+++++    .+.+.-+++|  .|..+...   .   +....| .
T Consensus        80 ~vi~~a~~~~--------------------~~~~~~l~~aa----~~~g~v~~~v--~S~~g~~~~~~~~~~p~~~~y-~  132 (321)
T 3c1o_A           80 IVISALPFPM--------------------ISSQIHIINAI----KAAGNIKRFL--PSDFGCEEDRIKPLPPFESVL-E  132 (321)
T ss_dssp             EEEECCCGGG--------------------SGGGHHHHHHH----HHHCCCCEEE--CSCCSSCGGGCCCCHHHHHHH-H
T ss_pred             EEEECCCccc--------------------hhhHHHHHHHH----HHhCCccEEe--ccccccCccccccCCCcchHH-H
Confidence            9999998642                    11223333333    3322124676  34333211   1   113478 9


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC------CCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW------SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +|.+++.+++.       .+++++.+.||++.++......      .................+..++|+|+++..++.+
T Consensus       133 sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~  205 (321)
T 3c1o_A          133 KKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACD  205 (321)
T ss_dssp             HHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhC
Confidence            99999988863       2677888899988765321100      0001001111122234567899999999988876


Q ss_pred             c
Q psy14567        232 V  232 (238)
Q Consensus       232 ~  232 (238)
                      .
T Consensus       206 ~  206 (321)
T 3c1o_A          206 P  206 (321)
T ss_dssp             G
T ss_pred             c
Confidence            4

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.59  E-value=1.7e-15  Score=123.90  Aligned_cols=185  Identities=14%  Similarity=0.061  Sum_probs=118.3

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh------HhHHHHHh-hCCCceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ------ANLDSLKQ-AFPNVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      ++.++||||||+||++++++|++.|++|++++|+.      ++.+.+.. ...++.++.+|++|++++.++++   .+|+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~---~~d~   80 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK---NVDV   80 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH---TCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc---CCCE
Confidence            45689999999999999999999999999999974      23322222 13468899999999999998887   4899


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-----CCCCchhhHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-----LEGHTIYSASK  159 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~y~~sK  159 (238)
                      |||++|...                    +.+...+++++    .+.+.-+++|+ |+......     .+....| .+|
T Consensus        81 vi~~a~~~~--------------------~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK  134 (308)
T 1qyc_A           81 VISTVGSLQ--------------------IESQVNIIKAI----KEVGTVKRFFP-SEFGNDVDNVHAVEPAKSVF-EVK  134 (308)
T ss_dssp             EEECCCGGG--------------------SGGGHHHHHHH----HHHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH-HHH
T ss_pred             EEECCcchh--------------------hhhHHHHHHHH----HhcCCCceEee-cccccCccccccCCcchhHH-HHH
Confidence            999998642                    11222333443    33321246763 44332211     1113468 999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC------CccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP------AKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+++.+++.       .+++++.+.||++.+.+........      ..............+..++|+|+++..++.+.
T Consensus       135 ~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  206 (308)
T 1qyc_A          135 AKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP  206 (308)
T ss_dssp             HHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG
T ss_pred             HHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCc
Confidence            999887764       2678888999998775432211100      00000011112234567789999999888764

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.58  E-value=1.5e-15  Score=127.50  Aligned_cols=174  Identities=13%  Similarity=0.055  Sum_probs=125.5

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      ++||||+|+||++++++|++.|+ +|+.++|+                     +|+++++++++.   +|+|||+||...
T Consensus         3 VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------~d~~~l~~~~~~---~d~Vih~a~~~~   58 (369)
T 3st7_A            3 IVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------TKEEELESALLK---ADFIVHLAGVNR   58 (369)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------CCHHHHHHHHHH---CSEEEECCCSBC
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------CCHHHHHHHhcc---CCEEEECCcCCC
Confidence            68999999999999999999998 77777665                     678888888874   899999999764


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHHh
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALEL  173 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~  173 (238)
                      ...         ....+++|+.++..+++++.    +.+.+.++|++||.....    ...|+.+|.+.+.+++.++.+.
T Consensus        59 ~~~---------~~~~~~~n~~~~~~l~~a~~----~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~~~~~~~~  121 (369)
T 3st7_A           59 PEH---------DKEFSLGNVSYLDHVLDILT----RNTKKPAILLSSSIQATQ----DNPYGESKLQGEQLLREYAEEY  121 (369)
T ss_dssp             TTC---------STTCSSSCCBHHHHHHHHHT----TCSSCCEEEEEEEGGGGS----CSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCC---------HHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCchhhcC----CCCchHHHHHHHHHHHHHHHHh
Confidence            321         23346788888888888763    333234899999987643    6799999999999999988875


Q ss_pred             CCCCeEEEEEeCCceecCcccCCCCC--CCccC--------CcccCCCCCCcCCCCCcccccccccccc
Q psy14567        174 GPYNIRVNSVQPTVVMTQMGRTGWSD--PAKAG--------PMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       174 ~~~~i~v~~i~PG~v~t~~~~~~~~~--~~~~~--------~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                         |+++..+.|+.+..+........  +.+..        ..........+...+|+|+++..++.+.
T Consensus       122 ---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  187 (369)
T 3st7_A          122 ---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGT  187 (369)
T ss_dssp             ---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTC
T ss_pred             ---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCC
Confidence               68899999999988754321100  00000        0001111224567888898888887654

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.56  E-value=1.1e-14  Score=121.64  Aligned_cols=157  Identities=14%  Similarity=0.057  Sum_probs=114.1

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCC-----CEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHE-----AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      .++||||+|+||++++++|+++|     ++|++++|+.+...   ....++.++.+|++|++++.++++.++++|+|||+
T Consensus         3 ~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~   79 (364)
T 2v6g_A            3 VALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW---HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYV   79 (364)
T ss_dssp             EEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC---CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc---cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEEC
Confidence            47899999999999999999999     99999999876532   12246889999999999999998876569999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEE-------EEcccccccc-------------
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV-------NVSSIAGKTA-------------  148 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv-------~isS~~~~~~-------------  148 (238)
                      ||...         .+ .+..+++|+.++..+++++.+...  + -.++|       ++||......             
T Consensus        80 a~~~~---------~~-~~~~~~~n~~~~~~l~~a~~~~~~--~-~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~  146 (364)
T 2v6g_A           80 TWANR---------ST-EQENCEANSKMFRNVLDAVIPNCP--N-LKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLP  146 (364)
T ss_dssp             CCCCC---------SS-HHHHHHHHHHHHHHHHHHHTTTCT--T-CCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSC
T ss_pred             CCCCc---------ch-HHHHHHHhHHHHHHHHHHHHHhcc--c-cceEEeccCceEEEechhhccccccCCCCCCcccc
Confidence            99652         12 466788999999999999865311  2 24665       6777643211             


Q ss_pred             -CCCCchhhHHHHHHHHHHHHHHHHhCCCC-eEEEEEeCCceecCcc
Q psy14567        149 -LEGHTIYSASKAALDSITRTMALELGPYN-IRVNSVQPTVVMTQMG  193 (238)
Q Consensus       149 -~~~~~~y~~sK~al~~l~~~l~~~~~~~~-i~v~~i~PG~v~t~~~  193 (238)
                       .+....|.    +.+.+++.++.   ..+ +++..+.|+.+..+..
T Consensus       147 ~~~~~~~y~----~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~  186 (364)
T 2v6g_A          147 RLKYMNFYY----DLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSP  186 (364)
T ss_dssp             CCSSCCHHH----HHHHHHHHHHT---TSTTCEEEEEEESSEECCCT
T ss_pred             CCccchhhH----HHHHHHHHHhh---cCCCceEEEECCCceeCCCC
Confidence             01133452    34555544432   245 9999999999988754

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.55  E-value=3e-15  Score=123.10  Aligned_cols=184  Identities=10%  Similarity=-0.030  Sum_probs=117.0

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH-hHHHHHh-hCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA-NLDSLKQ-AFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ++++||||+|+||++++++|++.|++|++++|+.+ ..+.+.+ ...+++++.+|++|++++.++++   .+|+|||+++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~---~~d~vi~~a~   88 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK---KVDVVISALA   88 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT---TCSEEEECCC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc---CCCEEEECCc
Confidence            46899999999999999999999999999999874 3322211 12468899999999999988887   4899999998


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-----CCCCchhhHHHHHHHHH
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-----LEGHTIYSASKAALDSI  165 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~y~~sK~al~~l  165 (238)
                      ...                    +.+...+++++    .+.+.-+++|+ |+......     .+....| .+|.+++.+
T Consensus        89 ~~~--------------------~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~  142 (318)
T 2r6j_A           89 FPQ--------------------ILDQFKILEAI----KVAGNIKRFLP-SDFGVEEDRINALPPFEALI-ERKRMIRRA  142 (318)
T ss_dssp             GGG--------------------STTHHHHHHHH----HHHCCCCEEEC-SCCSSCTTTCCCCHHHHHHH-HHHHHHHHH
T ss_pred             hhh--------------------hHHHHHHHHHH----HhcCCCCEEEe-eccccCcccccCCCCcchhH-HHHHHHHHH
Confidence            542                    11222333333    33321246663 43321111     1113467 999998887


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCC---CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS---DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++.       .+++++.+.||++..........   ................+..++|+|+++..++.+.
T Consensus       143 ~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~  205 (318)
T 2r6j_A          143 IEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDP  205 (318)
T ss_dssp             HHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCG
T ss_pred             HHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCc
Confidence            753       36888889999886643211000   0010001111122334678899999998888764

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.51  E-value=8.1e-14  Score=122.07  Aligned_cols=193  Identities=13%  Similarity=0.099  Sum_probs=127.5

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      ++.++||||+|+||.+++++|++.|++|++++|+.+..          ..+.+|+.+.     ..+.+.++|+|||+||.
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------~~v~~d~~~~-----~~~~l~~~D~Vih~A~~  211 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------GKRFWDPLNP-----ASDLLDGADVLVHLAGE  211 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------TCEECCTTSC-----CTTTTTTCSEEEECCCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------cceeecccch-----hHHhcCCCCEEEECCCC
Confidence            66789999999999999999999999999999987652          1256787642     12333579999999997


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCCCchhhHHHH
Q psy14567         92 ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEGHTIYSASKA  160 (238)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~y~~sK~  160 (238)
                      ....   ....+. ....+++|+.++..+++++.   .+.+ .+++|++||.....           ...+...|+.+|.
T Consensus       212 ~~~~---~~~~~~-~~~~~~~Nv~gt~~ll~a~a---~~~~-~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~  283 (516)
T 3oh8_A          212 PIFG---RFNDSH-KEAIRESRVLPTKFLAELVA---ESTQ-CTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCR  283 (516)
T ss_dssp             --------CCGGG-HHHHHHHTHHHHHHHHHHHH---HCSS-CCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHH
T ss_pred             cccc---ccchhH-HHHHHHHHHHHHHHHHHHHH---hcCC-CCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHH
Confidence            6432   223333 67788999999999999743   2223 46899999965422           1124557888888


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccC------CCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT------GWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~------~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ..+.+.+..    ...|++++.+.||.+.++....      .... .............-+...+|+|+++.+++.+.
T Consensus       284 ~~E~~~~~~----~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~-g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~  356 (516)
T 3oh8_A          284 DWEHATAPA----SDAGKRVAFIRTGVALSGRGGMLPLLKTLFST-GLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDA  356 (516)
T ss_dssp             HHHHTTHHH----HHTTCEEEEEEECEEEBTTBSHHHHHHHTTC----CCCCTTSCCEECEEEHHHHHHHHHHHHHCT
T ss_pred             HHHHHHHHH----HhCCCCEEEEEeeEEECCCCChHHHHHHHHHh-CCCcccCCCCceEceEeHHHHHHHHHHHHhCc
Confidence            777665433    3358999999999999874210      0000 00001111112234567788888888887653

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.19  E-value=5.7e-10  Score=90.65  Aligned_cols=191  Identities=14%  Similarity=0.070  Sum_probs=111.9

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARF   94 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~   94 (238)
                      ++||||||.||++++++|.++|++|++++|++..           .-+..|     .+  ..+.+..+|.+||.||....
T Consensus         3 ILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-----------~~~~~~-----~~--~~~~l~~~d~vihla~~~i~   64 (298)
T 4b4o_A            3 VLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-----------GRITWD-----EL--AASGLPSCDAAVNLAGENIL   64 (298)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-----------TEEEHH-----HH--HHHCCCSCSEEEECCCCCSS
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-----------Ceeecc-----hh--hHhhccCCCEEEEeccCccc
Confidence            6899999999999999999999999999997532           112222     11  12334578999999985433


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCCCchhhHHHHHHH
Q psy14567         95 DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEGHTIYSASKAALD  163 (238)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~y~~sK~al~  163 (238)
                      ......+... ....++.|+.++-.+.+++...-  .+ ...+|+.||.....           +..+...|+..|...+
T Consensus        65 ~~~~~~~~~~-~~~~~~~~v~~t~~l~~~~~~~~--~~-~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e  140 (298)
T 4b4o_A           65 NPLRRWNETF-QKEVLGSRLETTQLLAKAITKAP--QP-PKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWE  140 (298)
T ss_dssp             CTTSCCCHHH-HHHHHHHHHHHHHHHHHHHHHCS--SC-CSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHH
T ss_pred             chhhhhhhhh-hhhhhhHHHHHHHHHHHHHHHhC--CC-ceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHH
Confidence            3322333443 56778889988877777654321  11 23466666654321           1122334444444433


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCC---CC--CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTG---WS--DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~---~~--~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .     .......++++..+.||.+..+.....   ..  ...............-+...+|+++++.+++.+.
T Consensus       141 ~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~  209 (298)
T 4b4o_A          141 A-----AARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEAN  209 (298)
T ss_dssp             H-----HHCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCT
T ss_pred             H-----HHHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCC
Confidence            2     223456789999999999987642100   00  0000001111122233456788888888877553

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.18  E-value=2.4e-11  Score=98.52  Aligned_cols=104  Identities=12%  Similarity=0.054  Sum_probs=76.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      +.++++||||+||||+++++.|++.|++|++++|+.++.+++.++.   .++.++.+|+++++++++++++   +|++||
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~DvlVn  194 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKG---AHFVFT  194 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT---CSEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHh---CCEEEE
Confidence            4568899999999999999999999999999999988877665443   2456788999999998887764   799999


Q ss_pred             ccCCCCC-CCCCCCCh-HHHHHHHHHHHHHHHH
Q psy14567         88 NAAVARF-DRFLDIDE-ENLIDSIFDVNIKAVI  118 (238)
Q Consensus        88 ~ag~~~~-~~~~~~~~-~~~~~~~~~~n~~~~~  118 (238)
                      |+|.... .+..+.+. ++ +...+++|+.+++
T Consensus       195 ~ag~g~~~~~~~~~~~~~~-~~~~~dvn~~~~~  226 (287)
T 1lu9_A          195 AGAIGLELLPQAAWQNESS-IEIVADYNAQPPL  226 (287)
T ss_dssp             CCCTTCCSBCHHHHTTCTT-CCEEEECCCSSSC
T ss_pred             CCCccccCCChhHcCchHH-HHHHHHhhhhhhH
Confidence            9986422 11111111 22 3445666666654

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.15  E-value=5.2e-11  Score=98.33  Aligned_cols=159  Identities=14%  Similarity=0.174  Sum_probs=106.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC-------EEEEecCCh--HhHH----HHHhhCCCceEEEeecCCHHHHHHHHHhcC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA-------IIIALSKTQ--ANLD----SLKQAFPNVQTVQVDLQDWARTRAAVSKVG   80 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~----~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g   80 (238)
                      .++||||+|.||.+++..|++.|.       +|+++++.+  +..+    ++...  .+.++ .|+++.++..+.++   
T Consensus         6 kVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--~~~~~-~di~~~~~~~~a~~---   79 (327)
T 1y7t_A            6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--AFPLL-AGLEATDDPKVAFK---   79 (327)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--TCTTE-EEEEEESCHHHHTT---
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--ccccc-CCeEeccChHHHhC---
Confidence            468899999999999999999886       899999874  2222    22211  11223 56665444444444   


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccc--------cc-cCCC
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAG--------KT-ALEG  151 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--------~~-~~~~  151 (238)
                      ..|++||+||.....   ..+    -...+++|+.++..+++++..+-   +...+++++|+...        .. +.++
T Consensus        80 ~~D~Vih~Ag~~~~~---~~~----~~~~~~~Nv~~t~~l~~a~~~~~---~~~~~vvv~snp~~~~~~~~~~~~~~~~p  149 (327)
T 1y7t_A           80 DADYALLVGAAPRKA---GME----RRDLLQVNGKIFTEQGRALAEVA---KKDVKVLVVGNPANTNALIAYKNAPGLNP  149 (327)
T ss_dssp             TCSEEEECCCCCCCT---TCC----HHHHHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSSHHHHHHHHHHTCTTSCG
T ss_pred             CCCEEEECCCcCCCC---CCC----HHHHHHHHHHHHHHHHHHHHhhc---CCCeEEEEeCCchhhhHHHHHHHcCCCCh
Confidence            589999999976421   222    24457899999999998886542   12457888877541        11 2344


Q ss_pred             CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecC
Q psy14567        152 HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ  191 (238)
Q Consensus       152 ~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~  191 (238)
                      ...|+.+|...+.+.+.++..+   |+.+..+.|..+..+
T Consensus       150 ~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~G~  186 (327)
T 1y7t_A          150 RNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVWGN  186 (327)
T ss_dssp             GGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEEBC
T ss_pred             hheeccchHHHHHHHHHHHHHh---CcChhheeeeEEEcC
Confidence            5679999999999998888766   455555566555544

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.94  E-value=1.3e-09  Score=84.48  Aligned_cols=81  Identities=20%  Similarity=0.126  Sum_probs=61.2

Q ss_pred             CCcCCCCCCCC----------------CCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHH
Q psy14567         10 DRTNTKGGDYP----------------KPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTR   73 (238)
Q Consensus        10 ~~~~v~~itG~----------------s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   73 (238)
                      .+.++++||||                |||||.++|++|+++|++|++++++.+ ++     .+. ..-.+|+++.+++.
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~~~-g~~~~dv~~~~~~~   78 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----TPP-FVKRVDVMTALEME   78 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----CCT-TEEEEECCSHHHHH
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----cCC-CCeEEccCcHHHHH
Confidence            45678899999                699999999999999999999887652 11     111 13467998877764


Q ss_pred             HH-HHhcCCccEEEEccCCCCCCCC
Q psy14567         74 AA-VSKVGPVDVLINNAAVARFDRF   97 (238)
Q Consensus        74 ~~-~~~~g~id~li~~ag~~~~~~~   97 (238)
                      +. .+.++++|++|+|||+..+.+.
T Consensus        79 ~~v~~~~~~~Dili~~Aav~d~~p~  103 (226)
T 1u7z_A           79 AAVNASVQQQNIFIGCAAVADYRAA  103 (226)
T ss_dssp             HHHHHHGGGCSEEEECCBCCSEEES
T ss_pred             HHHHHhcCCCCEEEECCcccCCCCc
Confidence            44 4667899999999998765443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.93  E-value=2.3e-09  Score=74.58  Aligned_cols=73  Identities=25%  Similarity=0.161  Sum_probs=62.8

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ++.++|+|+ |++|+++++.|.+.| ++|++++|++++.+.+..  .++..+.+|+++.+++.++++   .+|++|++++
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~~~   78 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR--MGVATKQVDAKDEAGLAKALG---GFDAVISAAP   78 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT--TTCEEEECCTTCHHHHHHHTT---TCSEEEECSC
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh--CCCcEEEecCCCHHHHHHHHc---CCCEEEECCC
Confidence            346788999 999999999999999 899999999998887762  357788999999988887765   6899999996

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.76  E-value=8.5e-09  Score=87.45  Aligned_cols=78  Identities=17%  Similarity=0.199  Sum_probs=66.8

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCC---CEEEEecCChHhHHHHHhhCC-----CceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHE---AIIIALSKTQANLDSLKQAFP-----NVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      +.++|+|| ||||+++++.|++.|   ..|++.+|+.++++++.+..+     ++..+.+|+++.+++++++++. ++|+
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-~~Dv   79 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-KPQI   79 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-CCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-CCCE
Confidence            34677898 899999999999998   489999999999888776543     4788999999999999999876 5899


Q ss_pred             EEEccCCC
Q psy14567         85 LINNAAVA   92 (238)
Q Consensus        85 li~~ag~~   92 (238)
                      |||++|..
T Consensus        80 Vin~ag~~   87 (405)
T 4ina_A           80 VLNIALPY   87 (405)
T ss_dssp             EEECSCGG
T ss_pred             EEECCCcc
Confidence            99999853

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.75  E-value=1.4e-08  Score=87.26  Aligned_cols=77  Identities=16%  Similarity=0.107  Sum_probs=65.4

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      .+.++|+| +|++|+++++.|++.|++|++++|+.++++++.+..+....+.+|+++.+++.++++   ++|+|||+++.
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~---~~DvVIn~a~~   78 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA---KHDLVISLIPY   78 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHT---TSSEEEECCC-
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHc---CCcEEEECCcc
Confidence            35577887 799999999999999999999999999888887766667788999999988888776   68999999986


Q ss_pred             C
Q psy14567         92 A   92 (238)
Q Consensus        92 ~   92 (238)
                      .
T Consensus        79 ~   79 (450)
T 1ff9_A           79 T   79 (450)
T ss_dssp             -
T ss_pred             c
Confidence            4

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.69  E-value=1.6e-08  Score=78.54  Aligned_cols=83  Identities=13%  Similarity=0.060  Sum_probs=59.7

Q ss_pred             CcCCCCCCCC----------------CCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHH
Q psy14567         11 RTNTKGGDYP----------------KPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRA   74 (238)
Q Consensus        11 ~~~v~~itG~----------------s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   74 (238)
                      +.++++||||                ||++|.++|++|+++|++|++++|+.+..    ...+ ......|+...++..+
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~----~~~~-~~~~~~~v~s~~em~~   76 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK----PEPH-PNLSIREITNTKDLLI   76 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC----CCCC-TTEEEEECCSHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc----ccCC-CCeEEEEHhHHHHHHH
Confidence            3567889999                88899999999999999999999976321    1011 1234456766666544


Q ss_pred             H-HHhcCCccEEEEccCCCCCCCCC
Q psy14567         75 A-VSKVGPVDVLINNAAVARFDRFL   98 (238)
Q Consensus        75 ~-~~~~g~id~li~~ag~~~~~~~~   98 (238)
                      . .+.+++.|++|+||++..+.+..
T Consensus        77 ~v~~~~~~~Dili~aAAvsD~~p~~  101 (232)
T 2gk4_A           77 EMQERVQDYQVLIHSMAVSDYTPVY  101 (232)
T ss_dssp             HHHHHGGGCSEEEECSBCCSEEEEE
T ss_pred             HHHHhcCCCCEEEEcCccccccchh
Confidence            4 45668899999999987665544

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.69  E-value=3.4e-08  Score=75.29  Aligned_cols=78  Identities=17%  Similarity=0.051  Sum_probs=59.9

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++||||+||||.++++.+...|++|++++|++++.+.+.+...  . ..+|.++.+..+.+.+..  +++|++|+
T Consensus        37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~--~-~~~d~~~~~~~~~~~~~~~~~~~D~vi~  113 (198)
T 1pqw_A           37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV--E-YVGDSRSVDFADEILELTDGYGVDVVLN  113 (198)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC--S-EEEETTCSTHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC--C-EEeeCCcHHHHHHHHHHhCCCCCeEEEE
Confidence            455688999999999999999999999999999999988776654322  2 235777765555555444  36999999


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      |+|
T Consensus       114 ~~g  116 (198)
T 1pqw_A          114 SLA  116 (198)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            997

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.54  E-value=1.1e-07  Score=78.52  Aligned_cols=79  Identities=11%  Similarity=0.110  Sum_probs=59.9

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLI   86 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li   86 (238)
                      .+...+++||||+||||.++++.+...|++|++++|++++++.+.+ .+. . ..+|.++.+++.+.+.+.  +++|++|
T Consensus       143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~g~-~-~~~d~~~~~~~~~~~~~~~~~~~d~vi  219 (333)
T 1v3u_A          143 VKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ-IGF-D-AAFNYKTVNSLEEALKKASPDGYDCYF  219 (333)
T ss_dssp             CCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTC-S-EEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred             CCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-cCC-c-EEEecCCHHHHHHHHHHHhCCCCeEEE
Confidence            3456788999999999999999999999999999999988877743 332 1 235777633344444332  5799999


Q ss_pred             EccC
Q psy14567         87 NNAA   90 (238)
Q Consensus        87 ~~ag   90 (238)
                      +|+|
T Consensus       220 ~~~g  223 (333)
T 1v3u_A          220 DNVG  223 (333)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9998

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.54  E-value=7.5e-08  Score=70.81  Aligned_cols=70  Identities=19%  Similarity=0.038  Sum_probs=54.7

Q ss_pred             CchHHHHHHHHhhCCCEEEEecCChHh-------HHHHHhhCCCceEEEeecCCH--HHHHHHHHh----cCCccEEEEc
Q psy14567         22 PGIGRCIVEKLSQHEAIIIALSKTQAN-------LDSLKQAFPNVQTVQVDLQDW--ARTRAAVSK----VGPVDVLINN   88 (238)
Q Consensus        22 ~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~----~g~id~li~~   88 (238)
                      +.++.++++.|++.|++|++..|+...       .+.+.+.......+++|++++  ++++++++.    +|+ |++|||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn  104 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC  104 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence            568899999999999999998886543       223444444577789999999  898887754    588 999999


Q ss_pred             cCCC
Q psy14567         89 AAVA   92 (238)
Q Consensus        89 ag~~   92 (238)
                      ||+.
T Consensus       105 Agg~  108 (157)
T 3gxh_A          105 LANY  108 (157)
T ss_dssp             SBSH
T ss_pred             CCCC
Confidence            9974

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.52  E-value=2.5e-07  Score=66.49  Aligned_cols=75  Identities=15%  Similarity=0.147  Sum_probs=61.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +++.++|+|+ |.+|.++++.|.+.|++|++++++++..+.+.+.  ...++..|.++++.++++  .+.+.|++|.+.+
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~--~~~~~~gd~~~~~~l~~~--~~~~~d~vi~~~~   79 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE--GFDAVIADPTDESFYRSL--DLEGVSAVLITGS   79 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--TCEEEECCTTCHHHHHHS--CCTTCSEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC--CCcEEECCCCCHHHHHhC--CcccCCEEEEecC
Confidence            3456788887 7799999999999999999999999998888764  467889999999876654  2346899988776

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.51  E-value=1.7e-07  Score=80.75  Aligned_cols=76  Identities=13%  Similarity=0.140  Sum_probs=64.6

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ++.++|+|+ ||+|+++++.|++. |++|.+.+|+.++++++.+. .++..+.+|+++.+++.++++   ++|+|||+++
T Consensus        23 ~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-~~~~~~~~D~~d~~~l~~~l~---~~DvVIn~tp   97 (467)
T 2axq_A           23 GKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-SGSKAISLDVTDDSALDKVLA---DNDVVISLIP   97 (467)
T ss_dssp             CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-GTCEEEECCTTCHHHHHHHHH---TSSEEEECSC
T ss_pred             CCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-cCCcEEEEecCCHHHHHHHHc---CCCEEEECCc
Confidence            345778897 99999999999998 77999999999998888765 456778899999988888776   5899999998


Q ss_pred             CC
Q psy14567         91 VA   92 (238)
Q Consensus        91 ~~   92 (238)
                      ..
T Consensus        98 ~~   99 (467)
T 2axq_A           98 YT   99 (467)
T ss_dssp             GG
T ss_pred             hh
Confidence            65

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.47  E-value=1.5e-07  Score=78.88  Aligned_cols=77  Identities=17%  Similarity=0.053  Sum_probs=62.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      .+.++++|+|+ |+||+++++.+...|++|++++|+.++++.+.+..+..  +.+|.++.+++.+.++   ..|++|+++
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~--~~~~~~~~~~l~~~~~---~~DvVi~~~  237 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR--VITLTATEANIKKSVQ---HADLLIGAV  237 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS--EEEEECCHHHHHHHHH---HCSEEEECC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce--EEEecCCHHHHHHHHh---CCCEEEECC
Confidence            34567888999 99999999999999999999999999888776644322  5678888888887776   479999999


Q ss_pred             CCC
Q psy14567         90 AVA   92 (238)
Q Consensus        90 g~~   92 (238)
                      |..
T Consensus       238 g~~  240 (369)
T 2eez_A          238 LVP  240 (369)
T ss_dssp             C--
T ss_pred             CCC
Confidence            864

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.45  E-value=1.7e-08  Score=88.41  Aligned_cols=95  Identities=15%  Similarity=0.106  Sum_probs=66.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      +.++++|||| ||+|++++.+|++.|++|++++|+.++++++.+.++. ...  ++.+   +    +++  +.+|++|||
T Consensus       363 ~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~-~~~--~~~d---l----~~~~~~~~DilVN~  431 (523)
T 2o7s_A          363 ASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGG-KAL--SLTD---L----DNYHPEDGMVLANT  431 (523)
T ss_dssp             ---CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC--CE--ETTT---T----TTC--CCSEEEEEC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC-cee--eHHH---h----hhccccCceEEEEC
Confidence            4567899999 5999999999999999999999999999888877642 111  2222   1    222  358999999


Q ss_pred             cCCCCC-----CCCCCCChHHHHHHHHHHHHHHH
Q psy14567         89 AAVARF-----DRFLDIDEENLIDSIFDVNIKAV  117 (238)
Q Consensus        89 ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~  117 (238)
                      +|+...     .++.+.+.++ +..++++|+.+.
T Consensus       432 agvg~~~~~~~~~~~~~~~~~-~~~v~Dvny~p~  464 (523)
T 2o7s_A          432 TSMGMQPNVEETPISKDALKH-YALVFDAVYTPR  464 (523)
T ss_dssp             SSTTCTTCTTCCSSCTTTGGG-EEEEEECCCSSS
T ss_pred             CCCCCCCCCCCCCCChHHcCc-CcEEEEEeeCCc
Confidence            997532     2344445555 677888888765

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.44  E-value=3.9e-07  Score=75.11  Aligned_cols=79  Identities=11%  Similarity=0.063  Sum_probs=60.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++||||+||||.++++.+...|++|++++|++++++.+.+....   ..+|.++.+..+++.+..  +++|++|+
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~~---~~~d~~~~~~~~~i~~~~~~~~~d~vi~  220 (333)
T 1wly_A          144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGCH---HTINYSTQDFAEVVREITGGKGVDVVYD  220 (333)
T ss_dssp             CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS---EEEETTTSCHHHHHHHHHTTCCEEEEEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC---EEEECCCHHHHHHHHHHhCCCCCeEEEE
Confidence            4556789999999999999999999999999999999888777654332   235776654444444333  36999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      |+|.
T Consensus       221 ~~g~  224 (333)
T 1wly_A          221 SIGK  224 (333)
T ss_dssp             CSCT
T ss_pred             CCcH
Confidence            9984

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.43  E-value=3.7e-07  Score=75.06  Aligned_cols=78  Identities=12%  Similarity=-0.015  Sum_probs=60.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++||||+||||.++++.+...|++|++++|++++.+.+.+....   ..+|.++.+..+++.+..  +++|++|+
T Consensus       139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~D~vi~  215 (327)
T 1qor_A          139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAW---QVINYREEDLVERLKEITGGKKVRVVYD  215 (327)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCS---EEEETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC---EEEECCCccHHHHHHHHhCCCCceEEEE
Confidence            3567889999999999999999999999999999999888777664322   235776655555555444  36999999


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      |+|
T Consensus       216 ~~g  218 (327)
T 1qor_A          216 SVG  218 (327)
T ss_dssp             CSC
T ss_pred             CCc
Confidence            998

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.39  E-value=2.3e-07  Score=66.59  Aligned_cols=75  Identities=9%  Similarity=0.077  Sum_probs=58.7

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      ++.++|+|+ |++|..+++.|.+.|++|++++|+++..+.+.+.  ....+..|.++++.+.++  .+.+.|++|++++.
T Consensus         6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~--~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY--ATHAVIANATEENELLSL--GIRNFEYVIVAIGA   80 (144)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT--CSEEEECCTTCHHHHHTT--TGGGCSEEEECCCS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--CCEEEEeCCCCHHHHHhc--CCCCCCEEEECCCC
Confidence            455788898 9999999999999999999999998877665443  345678899987665543  13468999999874

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.39  E-value=6.9e-07  Score=74.33  Aligned_cols=79  Identities=10%  Similarity=0.064  Sum_probs=60.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++|+||+||||.++++.+...|++|++++|++++++.+.+....   ..+|.++.+..+.+.+..  +++|++|+
T Consensus       161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~vi~  237 (354)
T 2j8z_A          161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGAA---AGFNYKKEDFSEATLKFTKGAGVNLILD  237 (354)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCS---EEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc---EEEecCChHHHHHHHHHhcCCCceEEEE
Confidence            3456789999999999999999999999999999999888777554322   235776655444444433  36999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      |+|.
T Consensus       238 ~~G~  241 (354)
T 2j8z_A          238 CIGG  241 (354)
T ss_dssp             SSCG
T ss_pred             CCCc
Confidence            9984

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.38  E-value=3.8e-07  Score=75.66  Aligned_cols=79  Identities=14%  Similarity=0.078  Sum_probs=59.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++|+|++||||.++++.+...|++|++++|++++.+.+.+....   ...|.++.+++.+.+.+.  +++|++|+
T Consensus       168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~~---~~~d~~~~~~~~~~~~~~~~~~~D~vi~  244 (347)
T 2hcy_A          168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGGE---VFIDFTKEKDIVGAVLKATDGGAHGVIN  244 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTCC---EEEETTTCSCHHHHHHHHHTSCEEEEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCCc---eEEecCccHhHHHHHHHHhCCCCCEEEE
Confidence            4556889999999999999999999999999999998887666543322   235777544444444432  36999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      ++|.
T Consensus       245 ~~g~  248 (347)
T 2hcy_A          245 VSVS  248 (347)
T ss_dssp             CSSC
T ss_pred             CCCc
Confidence            9983

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.37  E-value=6.2e-07  Score=74.53  Aligned_cols=78  Identities=13%  Similarity=0.068  Sum_probs=59.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcC--CccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVG--PVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g--~id~li~   87 (238)
                      +...+++|+||+||||.++++.+...|++|++++|++++.+.+.+....   ..+|.++.+..+++.+..+  ++|++|+
T Consensus       169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~---~~~d~~~~~~~~~~~~~~~~~~~D~vi~  245 (351)
T 1yb5_A          169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAH---EVFNHREVNYIDKIKKYVGEKGIDIIIE  245 (351)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS---EEEETTSTTHHHHHHHHHCTTCEEEEEE
T ss_pred             CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCCC---EEEeCCCchHHHHHHHHcCCCCcEEEEE
Confidence            3556789999999999999999999999999999999888766543322   2357766554444444432  6999999


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      |+|
T Consensus       246 ~~G  248 (351)
T 1yb5_A          246 MLA  248 (351)
T ss_dssp             SCH
T ss_pred             CCC
Confidence            998

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.35  E-value=3.5e-07  Score=73.28  Aligned_cols=76  Identities=12%  Similarity=0.077  Sum_probs=56.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.++++|+|+ ||+|++++..|++.|++|++++|+.++++++.++.+...  .++..+.+++    .+ +..|++|+++|
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~--~~~~~~~~~~----~~-~~~DivVn~t~  189 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG--SIQALSMDEL----EG-HEFDLIINATS  189 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS--SEEECCSGGG----TT-CCCSEEEECCS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC--CeeEecHHHh----cc-CCCCEEEECCC
Confidence            4567888998 799999999999999999999999999888877654210  1222332222    12 57999999999


Q ss_pred             CCCC
Q psy14567         91 VARF   94 (238)
Q Consensus        91 ~~~~   94 (238)
                      ....
T Consensus       190 ~~~~  193 (271)
T 1nyt_A          190 SGIS  193 (271)
T ss_dssp             CGGG
T ss_pred             CCCC
Confidence            7643

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.35  E-value=5e-07  Score=74.82  Aligned_cols=79  Identities=13%  Similarity=0.168  Sum_probs=58.9

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++|+||+||||.++++.+...|++|++++|++++++.+.++++.-  ..+|.++.+++.+.+++.  +++|++|+
T Consensus       154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~--~~~d~~~~~~~~~~~~~~~~~~~d~vi~  231 (345)
T 2j3h_A          154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFD--DAFNYKEESDLTAALKRCFPNGIDIYFE  231 (345)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCS--EEEETTSCSCSHHHHHHHCTTCEEEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCc--eEEecCCHHHHHHHHHHHhCCCCcEEEE
Confidence            45568899999999999999999999999999999999888776444322  224665533333333332  46999999


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      |+|
T Consensus       232 ~~g  234 (345)
T 2j3h_A          232 NVG  234 (345)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            997

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.34  E-value=9.9e-07  Score=73.39  Aligned_cols=76  Identities=11%  Similarity=0.000  Sum_probs=58.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEEccC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLINNAA   90 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~~ag   90 (238)
                      .+++||||+||||.++++.+...|+ +|+++++++++.+.+.++++.-  ..+|.++.+..+.+.+.. +++|++|+|+|
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~--~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G  239 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD--AAINYKKDNVAEQLRESCPAGVDVYFDNVG  239 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS--EEEETTTSCHHHHHHHHCTTCEEEEEESCC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc--eEEecCchHHHHHHHHhcCCCCCEEEECCC
Confidence            7889999999999999999999999 9999999998888777644322  235776643333333322 36999999998

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.31  E-value=9.4e-08  Score=77.30  Aligned_cols=75  Identities=16%  Similarity=0.206  Sum_probs=56.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCc----eEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNV----QTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      +.++++|||++ |+|+++++.|++.| +|++++|+.++++++.++....    ..+.+|+++.      .+.++++|++|
T Consensus       127 ~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~------~~~~~~~DilV  198 (287)
T 1nvt_A          127 KDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL------DVDLDGVDIII  198 (287)
T ss_dssp             CSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT------TCCCTTCCEEE
T ss_pred             CCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH------HHhhCCCCEEE
Confidence            45678899987 99999999999999 9999999998887776543210    0123455542      34457899999


Q ss_pred             EccCCCC
Q psy14567         87 NNAAVAR   93 (238)
Q Consensus        87 ~~ag~~~   93 (238)
                      ||+|...
T Consensus       199 n~ag~~~  205 (287)
T 1nvt_A          199 NATPIGM  205 (287)
T ss_dssp             ECSCTTC
T ss_pred             ECCCCCC
Confidence            9999764

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.31  E-value=1.1e-06  Score=72.50  Aligned_cols=81  Identities=10%  Similarity=0.059  Sum_probs=60.3

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLIN   87 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~   87 (238)
                      -+...+++|+||+||||.++++.+...|++|++++|++++.+.+.++++--  ...|.++.+..+.+.+.. +++|++|+
T Consensus       147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~d~vi~  224 (336)
T 4b7c_A          147 PKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFD--GAIDYKNEDLAAGLKRECPKGIDVFFD  224 (336)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCS--EEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCC--EEEECCCHHHHHHHHHhcCCCceEEEE
Confidence            345668899999999999999999999999999999999988884444322  224666544444443333 46999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      |+|.
T Consensus       225 ~~g~  228 (336)
T 4b7c_A          225 NVGG  228 (336)
T ss_dssp             SSCH
T ss_pred             CCCc
Confidence            9983

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.21  E-value=2.1e-06  Score=71.11  Aligned_cols=79  Identities=18%  Similarity=0.091  Sum_probs=58.9

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLI   86 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li   86 (238)
                      +...+++|+|++||||..+++.+... |++|+++++++++.+.+.+....   ...|.++.+..+++.+..  +++|++|
T Consensus       169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~d~vi  245 (347)
T 1jvb_A          169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD---YVINASMQDPLAEIRRITESKGVDAVI  245 (347)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS---EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCC---EEecCCCccHHHHHHHHhcCCCceEEE
Confidence            45567899999999999999999998 99999999999888777654322   224665544433333322  5799999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      +++|.
T Consensus       246 ~~~g~  250 (347)
T 1jvb_A          246 DLNNS  250 (347)
T ss_dssp             ESCCC
T ss_pred             ECCCC
Confidence            99984

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.17  E-value=5e-06  Score=68.77  Aligned_cols=78  Identities=10%  Similarity=0.056  Sum_probs=58.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++|+|++||+|..+++.+...|++|++++|++++++.+.+....  . .+|.++++..+.+.+..  +++|++|+
T Consensus       165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga~--~-~~d~~~~~~~~~~~~~~~~~~~d~vi~  241 (343)
T 2eih_A          165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGAD--E-TVNYTHPDWPKEVRRLTGGKGADKVVD  241 (343)
T ss_dssp             CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS--E-EEETTSTTHHHHHHHHTTTTCEEEEEE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCC--E-EEcCCcccHHHHHHHHhCCCCceEEEE
Confidence            3456789999999999999999999999999999999988877654322  1 25776654333333322  36999999


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      ++|
T Consensus       242 ~~g  244 (343)
T 2eih_A          242 HTG  244 (343)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            998

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.17  E-value=1.3e-08  Score=87.15  Aligned_cols=44  Identities=11%  Similarity=-0.058  Sum_probs=37.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA   55 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (238)
                      ..++++|||++ +||+++|+.|+..|++|+++++++.+..+....
T Consensus       264 ~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~  307 (488)
T 3ond_A          264 AGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATME  307 (488)
T ss_dssp             TTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT
T ss_pred             cCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHh
Confidence            56788889987 999999999999999999999998776655443

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.16  E-value=3.4e-06  Score=70.47  Aligned_cols=78  Identities=15%  Similarity=0.163  Sum_probs=60.8

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      .++++++++.++ || |++|+.+++.|++ ...|.+.+|+.++++.+.+   ....+.+|++|.+++.++++   +.|+|
T Consensus        11 ~~~g~~mkilvl-Ga-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~---~~~~~~~d~~d~~~l~~~~~---~~DvV   81 (365)
T 3abi_A           11 HIEGRHMKVLIL-GA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE---FATPLKVDASNFDKLVEVMK---EFELV   81 (365)
T ss_dssp             -----CCEEEEE-CC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT---TSEEEECCTTCHHHHHHHHT---TCSEE
T ss_pred             cccCCccEEEEE-CC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc---cCCcEEEecCCHHHHHHHHh---CCCEE
Confidence            578888886655 88 9999999999975 4789999999998887754   45678899999999988887   46999


Q ss_pred             EEccCCC
Q psy14567         86 INNAAVA   92 (238)
Q Consensus        86 i~~ag~~   92 (238)
                      |++++..
T Consensus        82 i~~~p~~   88 (365)
T 3abi_A           82 IGALPGF   88 (365)
T ss_dssp             EECCCGG
T ss_pred             EEecCCc
Confidence            9998754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.14  E-value=4.8e-06  Score=67.90  Aligned_cols=78  Identities=13%  Similarity=0.130  Sum_probs=60.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCC---hHhHHHHHhhCC---CceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKT---QANLDSLKQAFP---NVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~---~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      +.++++|+|+ ||+|++++..|++.|+ +|++++|+   .++++++.+++.   ...+...++.+.+++.+.+.   ..|
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~---~aD  228 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA---ESV  228 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---TCS
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc---CCC
Confidence            4567788987 7999999999999999 89999999   788777765442   23445567777776666665   479


Q ss_pred             EEEEccCCC
Q psy14567         84 VLINNAAVA   92 (238)
Q Consensus        84 ~li~~ag~~   92 (238)
                      +|||+....
T Consensus       229 iIINaTp~G  237 (315)
T 3tnl_A          229 IFTNATGVG  237 (315)
T ss_dssp             EEEECSSTT
T ss_pred             EEEECccCC
Confidence            999998654

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.13  E-value=6.1e-06  Score=67.91  Aligned_cols=145  Identities=12%  Similarity=0.116  Sum_probs=90.0

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC-------EEEEecCC----hHhHHH----HHhhCCCceEEEeecCCHHHHHHHHHh
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA-------IIIALSKT----QANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK   78 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~----~~~~~~~~~~~~~D~~~~~~v~~~~~~   78 (238)
                      .++||||+|.+|.+++..|+..|.       .|++++++    +++++.    +.+..-..   ..|+....+..+.++ 
T Consensus         7 KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~---~~~i~~~~~~~~al~-   82 (329)
T 1b8p_A            7 RVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL---LAGMTAHADPMTAFK-   82 (329)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT---EEEEEEESSHHHHTT-
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc---cCcEEEecCcHHHhC-
Confidence            467889999999999999998885       79999998    544432    33211112   134433333344444 


Q ss_pred             cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccc--------cc-cC
Q psy14567         79 VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAG--------KT-AL  149 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--------~~-~~  149 (238)
                        ..|++|++||....   ...+.    ...+..|+.....+.+.+..+-   ++.++++++|.-..        .. +.
T Consensus        83 --~aD~Vi~~ag~~~~---~g~~r----~dl~~~N~~i~~~i~~~i~~~~---~p~a~ii~~SNPv~~~t~~~~~~~~~~  150 (329)
T 1b8p_A           83 --DADVALLVGARPRG---PGMER----KDLLEANAQIFTVQGKAIDAVA---SRNIKVLVVGNPANTNAYIAMKSAPSL  150 (329)
T ss_dssp             --TCSEEEECCCCCCC---TTCCH----HHHHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSSHHHHHHHHHHTCTTS
T ss_pred             --CCCEEEEeCCCCCC---CCCCH----HHHHHHHHHHHHHHHHHHHHhc---CCCeEEEEccCchHHHHHHHHHHcCCC
Confidence              57999999997542   12232    2346788888877777765432   12568999887432        11 23


Q ss_pred             CCCchhhHHHHHHHHHHHHHHHHhC
Q psy14567        150 EGHTIYSASKAALDSITRTMALELG  174 (238)
Q Consensus       150 ~~~~~y~~sK~al~~l~~~l~~~~~  174 (238)
                      +....|+.++.--..+...++..+.
T Consensus       151 p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          151 PAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             CGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             CHHHEEEeecHHHHHHHHHHHHHhC
Confidence            3333577766555566667777664

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.12  E-value=5.8e-06  Score=68.66  Aligned_cols=79  Identities=9%  Similarity=0.060  Sum_probs=58.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh-cCCccEEEEc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK-VGPVDVLINN   88 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-~g~id~li~~   88 (238)
                      +...+++|+||+|+||.++++.+...|++|+++++++++.+.+.+.....   ..|.++.+..+.+.+. -+++|++|++
T Consensus       166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~---~~~~~~~~~~~~~~~~~~~g~Dvvid~  242 (353)
T 4dup_A          166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGAKR---GINYRSEDFAAVIKAETGQGVDIILDM  242 (353)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCSE---EEETTTSCHHHHHHHHHSSCEEEEEES
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCE---EEeCCchHHHHHHHHHhCCCceEEEEC
Confidence            34567899999999999999999999999999999999988777654332   2455544333333222 2469999999


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      +|.
T Consensus       243 ~g~  245 (353)
T 4dup_A          243 IGA  245 (353)
T ss_dssp             CCG
T ss_pred             CCH
Confidence            984

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.12  E-value=9.4e-06  Score=57.71  Aligned_cols=73  Identities=11%  Similarity=0.047  Sum_probs=57.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      .++|+|+ |.+|..+++.|.+.|++|++++|+++..+.+.+.. +...+..|.++++.+.+.  .+.+.|++|.+.+
T Consensus         6 ~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-~~~~~~~d~~~~~~l~~~--~~~~~d~vi~~~~   78 (140)
T 1lss_A            6 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-DALVINGDCTKIKTLEDA--GIEDADMYIAVTG   78 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-SSEEEESCTTSHHHHHHT--TTTTCSEEEECCS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-CcEEEEcCCCCHHHHHHc--CcccCCEEEEeeC
Confidence            4567776 99999999999999999999999998888776554 456778899887765432  2346899999974

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.06  E-value=7.5e-06  Score=67.16  Aligned_cols=79  Identities=9%  Similarity=-0.015  Sum_probs=60.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++|+||+|+||..+++.+...|++|+++++++++++.+.+.....   ..|.++.+..+.+.+..  .++|++|+
T Consensus       139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~---~~~~~~~~~~~~~~~~~~~~g~Dvvid  215 (325)
T 3jyn_A          139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGAWE---TIDYSHEDVAKRVLELTDGKKCPVVYD  215 (325)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE---EEETTTSCHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE---EEeCCCccHHHHHHHHhCCCCceEEEE
Confidence            45567899999999999999999999999999999999888777654322   24555544444444443  26999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      ++|.
T Consensus       216 ~~g~  219 (325)
T 3jyn_A          216 GVGQ  219 (325)
T ss_dssp             SSCG
T ss_pred             CCCh
Confidence            9984

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.00  E-value=8.4e-06  Score=67.31  Aligned_cols=80  Identities=11%  Similarity=0.037  Sum_probs=59.7

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLI   86 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li   86 (238)
                      -+...+++|+||+|+||..++..+...|++|+++++++++.+.+.+.....   ..|.++.+..+.+.+..  .++|++|
T Consensus       142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga~~---~~~~~~~~~~~~~~~~~~~~g~Dvvi  218 (340)
T 3gms_A          142 LQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGAAY---VIDTSTAPLYETVMELTNGIGADAAI  218 (340)
T ss_dssp             CCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSE---EEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCCcE---EEeCCcccHHHHHHHHhCCCCCcEEE
Confidence            345668899999999999999999999999999999999888777654332   24555544334443333  2699999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      +++|.
T Consensus       219 d~~g~  223 (340)
T 3gms_A          219 DSIGG  223 (340)
T ss_dssp             ESSCH
T ss_pred             ECCCC
Confidence            99984

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.99  E-value=1.1e-05  Score=66.39  Aligned_cols=79  Identities=15%  Similarity=0.072  Sum_probs=58.9

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++|+||+|+||..++..+...|++|+++++++++++.+.+....   ...|.++.+..+.+.+..  .++|++|+
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~---~~~~~~~~~~~~~~~~~~~~~g~D~vid  223 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGAE---YLINASKEDILRQVLKFTNGKGVDASFD  223 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS---EEEETTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc---EEEeCCCchHHHHHHHHhCCCCceEEEE
Confidence            4566789999999999999999999999999999999988866554322   124555544444444433  35999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      ++|.
T Consensus       224 ~~g~  227 (334)
T 3qwb_A          224 SVGK  227 (334)
T ss_dssp             CCGG
T ss_pred             CCCh
Confidence            9984

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.96  E-value=1.9e-05  Score=65.19  Aligned_cols=78  Identities=18%  Similarity=0.162  Sum_probs=56.5

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-C-CccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-G-PVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g-~id~li~   87 (238)
                      +...+++|+||+|+||..++..+...|++|++++++.++.+.+.+..... .  .|.. .+..+.+.+.. + ++|++|+
T Consensus       158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~~-v--~~~~-~~~~~~v~~~~~~~g~Dvvid  233 (342)
T 4eye_A          158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGADI-V--LPLE-EGWAKAVREATGGAGVDMVVD  233 (342)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSE-E--EESS-TTHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcE-E--ecCc-hhHHHHHHHHhCCCCceEEEE
Confidence            45567899999999999999999999999999999999887776654332 2  3443 22222333323 2 5999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      ++|.
T Consensus       234 ~~g~  237 (342)
T 4eye_A          234 PIGG  237 (342)
T ss_dssp             SCC-
T ss_pred             CCch
Confidence            9984

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.92  E-value=2.2e-05  Score=65.41  Aligned_cols=77  Identities=10%  Similarity=0.098  Sum_probs=56.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++|+||+|+||..+++.+...|++|+++++++++.+.+.+.... ..  .|.++.+ +.+.+.+.  +++|++|+
T Consensus       162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga~-~~--~~~~~~~-~~~~~~~~~~~g~D~vid  237 (362)
T 2c0c_A          162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCD-RP--INYKTEP-VGTVLKQEYPEGVDVVYE  237 (362)
T ss_dssp             CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EE--EETTTSC-HHHHHHHHCTTCEEEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCCc-EE--EecCChh-HHHHHHHhcCCCCCEEEE
Confidence            3456789999999999999999999999999999999888777654322 22  3544432 22233222  36999999


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      ++|
T Consensus       238 ~~g  240 (362)
T 2c0c_A          238 SVG  240 (362)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            998

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.91  E-value=3.1e-05  Score=56.25  Aligned_cols=75  Identities=12%  Similarity=0.098  Sum_probs=57.3

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC-hHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT-QANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ..++|.|+ |.+|..+++.|.+.|+.|++++++ ++..+.+.... .++.++..|.++++.++++  .+.+.|.+|.+.+
T Consensus         4 ~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a--~i~~ad~vi~~~~   80 (153)
T 1id1_A            4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKA--GIDRCRAILALSD   80 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHH--TTTTCSEEEECSS
T ss_pred             CcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHc--ChhhCCEEEEecC
Confidence            34566675 899999999999999999999997 56565555433 3588899999998876655  1235788888775

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.86  E-value=2.4e-05  Score=67.06  Aligned_cols=49  Identities=8%  Similarity=-0.008  Sum_probs=41.6

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP   57 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   57 (238)
                      .+...+++|+||+|+||..++..+...|++|+++++++++++.+.+...
T Consensus       218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~lGa  266 (447)
T 4a0s_A          218 MKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGC  266 (447)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC
Confidence            3456678999999999999999999999999999999998887765443

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.84  E-value=2.8e-05  Score=64.39  Aligned_cols=76  Identities=5%  Similarity=-0.062  Sum_probs=56.3

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEccC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNAA   90 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~ag   90 (238)
                      .+++|+||+|+||..++..+...|++|+++++++++.+.+.+.....   ..|..+.+..+.+.+..  .++|++|+++|
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga~~---~~~~~~~~~~~~v~~~~~~~g~D~vid~~g  242 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGAAH---VLNEKAPDFEATLREVMKAEQPRIFLDAVT  242 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTCSE---EEETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCE---EEECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence            67899999999999999999999999999999999988777654332   24555433333332222  26999999998


Q ss_pred             C
Q psy14567         91 V   91 (238)
Q Consensus        91 ~   91 (238)
                      .
T Consensus       243 ~  243 (349)
T 3pi7_A          243 G  243 (349)
T ss_dssp             H
T ss_pred             C
Confidence            4

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.82  E-value=3.5e-05  Score=63.53  Aligned_cols=78  Identities=15%  Similarity=0.078  Sum_probs=56.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +...+++|+|+ ||+|..+++.+...|++|++++|++++.+.+.+....   ..+|.++.+..+.+.+..+.+|++|+++
T Consensus       163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~---~~~d~~~~~~~~~~~~~~~~~d~vid~~  238 (339)
T 1rjw_A          163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGAD---LVVNPLKEDAAKFMKEKVGGVHAAVVTA  238 (339)
T ss_dssp             CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCS---EEECTTTSCHHHHHHHHHSSEEEEEESS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCC---EEecCCCccHHHHHHHHhCCCCEEEECC
Confidence            34567889999 8899999999999999999999999988877654322   2256654322222222126799999999


Q ss_pred             CC
Q psy14567         90 AV   91 (238)
Q Consensus        90 g~   91 (238)
                      |.
T Consensus       239 g~  240 (339)
T 1rjw_A          239 VS  240 (339)
T ss_dssp             CC
T ss_pred             CC
Confidence            84

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.81  E-value=0.00021  Score=58.63  Aligned_cols=102  Identities=15%  Similarity=0.190  Sum_probs=65.1

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCC--CEEEEecCChHh--HHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      .++||||+|.+|.+++..|+..|  ..|++++++++.  ..++........+ .. +.+.++..+.++   ..|++|+++
T Consensus        10 KI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v-~~-~~~t~d~~~al~---gaDvVi~~a   84 (326)
T 1smk_A           10 KVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVV-RG-FLGQQQLEAALT---GMDLIIVPA   84 (326)
T ss_dssp             EEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEE-EE-EESHHHHHHHHT---TCSEEEECC
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceE-EE-EeCCCCHHHHcC---CCCEEEEcC
Confidence            46889999999999999999988  689999987762  2223322111111 11 233445555554   579999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT  127 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  127 (238)
                      |.....   ..+..+    .+..|+.....+.+.+.++
T Consensus        85 g~~~~~---g~~r~d----l~~~N~~~~~~i~~~i~~~  115 (326)
T 1smk_A           85 GVPRKP---GMTRDD----LFKINAGIVKTLCEGIAKC  115 (326)
T ss_dssp             CCCCCS---SCCCSH----HHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCC---CCCHHH----HHHHHHHHHHHHHHHHHhh
Confidence            965321   122222    2578888887777776543

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.80  E-value=2.4e-05  Score=62.61  Aligned_cols=74  Identities=15%  Similarity=0.108  Sum_probs=53.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCc-eEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNV-QTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.+.++|+|+ ||+|++++..|++.|++|++.+|+.++.+++.+..+.. .....|+   +++.   +  +..|++|+++
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~---~~~~---~--~~~DivIn~t  188 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM---DSIP---L--QTYDLVINAT  188 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG---GGCC---C--SCCSEEEECC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH---HHhc---c--CCCCEEEECC
Confidence            4556788897 89999999999999999999999999888887654321 1222333   1111   1  4789999999


Q ss_pred             CCCC
Q psy14567         90 AVAR   93 (238)
Q Consensus        90 g~~~   93 (238)
                      +...
T Consensus       189 ~~~~  192 (272)
T 1p77_A          189 SAGL  192 (272)
T ss_dssp             CC--
T ss_pred             CCCC
Confidence            8764

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.77  E-value=9e-05  Score=52.96  Aligned_cols=71  Identities=15%  Similarity=0.120  Sum_probs=56.5

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ++|.|+ |.+|..+++.|.+.|+.|++++++++..+.+.+.  ++..+..|.++++.++++  .+.+.|.+|.+.+
T Consensus        10 viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~--g~~~i~gd~~~~~~l~~a--~i~~ad~vi~~~~   80 (140)
T 3fwz_A           10 ALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRER--GVRAVLGNAANEEIMQLA--HLECAKWLILTIP   80 (140)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT--TCEEEESCTTSHHHHHHT--TGGGCSEEEECCS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc--CCCEEECCCCCHHHHHhc--CcccCCEEEEECC
Confidence            444465 7899999999999999999999999999888763  577889999998876554  1235788887764

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.77  E-value=4.5e-05  Score=61.80  Aligned_cols=74  Identities=9%  Similarity=0.024  Sum_probs=55.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCC-HHHHHHHHHhcCCccEEEEc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQD-WARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~g~id~li~~   88 (238)
                      +...+++|+|++|++|..+++.+...|++|+++++++++.+.+.+....   ...|..+ .+.    .+.++++|++|+ 
T Consensus       124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga~---~~~~~~~~~~~----~~~~~~~d~vid-  195 (302)
T 1iz0_A          124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAE---EAATYAEVPER----AKAWGGLDLVLE-  195 (302)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCS---EEEEGGGHHHH----HHHTTSEEEEEE-
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCCC---EEEECCcchhH----HHHhcCceEEEE-
Confidence            3456789999999999999999999999999999999887777553322   1246655 332    223367999999 


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      +|.
T Consensus       196 ~g~  198 (302)
T 1iz0_A          196 VRG  198 (302)
T ss_dssp             CSC
T ss_pred             CCH
Confidence            874

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.77  E-value=5.9e-05  Score=60.63  Aligned_cols=76  Identities=13%  Similarity=0.197  Sum_probs=55.9

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCC----CceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFP----NVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      .+.++++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+...    ...+...+..+   +.+.+++   .|+
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~~---~Di  197 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIAA---ADG  197 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHHH---SSE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHhc---CCE
Confidence            35567788987 8999999999999999 79999999998887765442    33444445433   3444443   699


Q ss_pred             EEEccCCC
Q psy14567         85 LINNAAVA   92 (238)
Q Consensus        85 li~~ag~~   92 (238)
                      +||+....
T Consensus       198 VInaTp~G  205 (283)
T 3jyo_A          198 VVNATPMG  205 (283)
T ss_dssp             EEECSSTT
T ss_pred             EEECCCCC
Confidence            99998654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.75  E-value=4.6e-05  Score=63.48  Aligned_cols=76  Identities=17%  Similarity=0.087  Sum_probs=57.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +..+++|+|+ ||+|+++++.+...|++|++++|+.++++.+.+.+...  +.++..+.+++.+.+.   ..|++|++++
T Consensus       166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~DvVI~~~~  239 (361)
T 1pjc_A          166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR--VELLYSNSAEIETAVA---EADLLIGAVL  239 (361)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG--SEEEECCHHHHHHHHH---TCSEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCce--eEeeeCCHHHHHHHHc---CCCEEEECCC
Confidence            4467888998 99999999999999999999999999988876654321  1123334555555544   5899999998


Q ss_pred             CC
Q psy14567         91 VA   92 (238)
Q Consensus        91 ~~   92 (238)
                      ..
T Consensus       240 ~~  241 (361)
T 1pjc_A          240 VP  241 (361)
T ss_dssp             CT
T ss_pred             cC
Confidence            64

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.75  E-value=6.4e-05  Score=61.19  Aligned_cols=78  Identities=17%  Similarity=0.112  Sum_probs=56.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCC---hHhHHHHHhhCC---CceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKT---QANLDSLKQAFP---NVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~---~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      +.+.++|+|+ ||.|++++..|++.|+ +|.++.|+   .++++++.+++.   .......+..+.+...+.+.+   .|
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~---~D  222 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALAS---AD  222 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHH---CS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccC---ce
Confidence            4556777886 8999999999999998 89999999   777777665442   233445566664333444443   69


Q ss_pred             EEEEccCCC
Q psy14567         84 VLINNAAVA   92 (238)
Q Consensus        84 ~li~~ag~~   92 (238)
                      ++||+.+..
T Consensus       223 iIINaTp~G  231 (312)
T 3t4e_A          223 ILTNGTKVG  231 (312)
T ss_dssp             EEEECSSTT
T ss_pred             EEEECCcCC
Confidence            999998654

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.69  E-value=5e-05  Score=61.51  Aligned_cols=76  Identities=17%  Similarity=0.070  Sum_probs=55.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.+.++|.|+ ||+|++++..|++.|+ +|++.+|+.++++++.+.++....   ++.+.+++.+.   +...|++|+++
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~---~~~~~~~~~~~---~~~aDivIn~t  212 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS---AYFSLAEAETR---LAEYDIIINTT  212 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC---CEECHHHHHHT---GGGCSEEEECS
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC---ceeeHHHHHhh---hccCCEEEECC
Confidence            3456777886 7999999999999998 999999999999888877643100   12223333333   34589999999


Q ss_pred             CCCC
Q psy14567         90 AVAR   93 (238)
Q Consensus        90 g~~~   93 (238)
                      +...
T Consensus       213 ~~~~  216 (297)
T 2egg_A          213 SVGM  216 (297)
T ss_dssp             CTTC
T ss_pred             CCCC
Confidence            8654

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.68  E-value=9e-05  Score=63.63  Aligned_cols=82  Identities=9%  Similarity=0.005  Sum_probs=56.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEe--e--------cCCHHHHHHH---H
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQV--D--------LQDWARTRAA---V   76 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~--D--------~~~~~~v~~~---~   76 (238)
                      +...+++|+||+|+||...+..+...|++|+++++++++++.+++......+-..  |        .++.++.+++   +
T Consensus       227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i  306 (456)
T 3krt_A          227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI  306 (456)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHH
Confidence            4556789999999999999999999999999999999988877665433211111  1        1233333222   2


Q ss_pred             Hhc---CCccEEEEccCC
Q psy14567         77 SKV---GPVDVLINNAAV   91 (238)
Q Consensus        77 ~~~---g~id~li~~ag~   91 (238)
                      .+.   .++|++|.++|.
T Consensus       307 ~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          307 RELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHTSCCEEEEEECSCH
T ss_pred             HHHhCCCCCcEEEEcCCc
Confidence            222   269999999983

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.66  E-value=0.00012  Score=61.38  Aligned_cols=77  Identities=14%  Similarity=0.048  Sum_probs=59.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      .+.++++|+|+ |+||+.+++.+...|++|++++|+.++++.+.+.++..  +..+.++.+++.+.+.   ..|++|+++
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~--~~~~~~~~~~l~~~l~---~aDvVi~~~  239 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGR--IHTRYSSAYELEGAVK---RADLVIGAV  239 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS--SEEEECCHHHHHHHHH---HCSEEEECC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCe--eEeccCCHHHHHHHHc---CCCEEEECC
Confidence            45567888998 99999999999999999999999999888777654321  1244555666666665   479999998


Q ss_pred             CCC
Q psy14567         90 AVA   92 (238)
Q Consensus        90 g~~   92 (238)
                      +..
T Consensus       240 ~~p  242 (377)
T 2vhw_A          240 LVP  242 (377)
T ss_dssp             CCT
T ss_pred             CcC
Confidence            854

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.62  E-value=8.6e-05  Score=61.37  Aligned_cols=76  Identities=9%  Similarity=0.030  Sum_probs=55.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ...+++|+||+|++|..++..+...|++|+++++++++.+.+.+...+. .  .|..+  +..+.+.+.  +.+|++|++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-v--i~~~~--~~~~~~~~~~~~g~Dvv~d~  224 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADI-V--LNHKE--SLLNQFKTQGIELVDYVFCT  224 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTCSE-E--ECTTS--CHHHHHHHHTCCCEEEEEES
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcE-E--EECCc--cHHHHHHHhCCCCccEEEEC
Confidence            4567889999999999999999999999999999999888777654332 2  33332  122222222  369999999


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      +|.
T Consensus       225 ~g~  227 (346)
T 3fbg_A          225 FNT  227 (346)
T ss_dssp             SCH
T ss_pred             CCc
Confidence            873

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.62  E-value=0.00014  Score=60.07  Aligned_cols=75  Identities=12%  Similarity=0.110  Sum_probs=54.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++|+||+|+||..++..+...|++|+++ +++++++.+.+...  ..  +| .+.+..+.+.+..  ..+|++|.
T Consensus       149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~lGa--~~--i~-~~~~~~~~~~~~~~~~g~D~vid  222 (343)
T 3gaz_A          149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDLGA--TP--ID-ASREPEDYAAEHTAGQGFDLVYD  222 (343)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHHTS--EE--EE-TTSCHHHHHHHHHTTSCEEEEEE
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHcCC--CE--ec-cCCCHHHHHHHHhcCCCceEEEE
Confidence            455678999999999999999999999999999 88888777665543  22  44 3322222222222  36999999


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      ++|
T Consensus       223 ~~g  225 (343)
T 3gaz_A          223 TLG  225 (343)
T ss_dssp             SSC
T ss_pred             CCC
Confidence            998

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.60  E-value=0.00016  Score=55.70  Aligned_cols=72  Identities=10%  Similarity=0.022  Sum_probs=58.3

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ++|.|+ |.+|.++++.|.+.|..|++++++++..+++.+.. +..++..|.++++.++++  .+.+.|.+|.+.+
T Consensus         3 iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-~~~~i~gd~~~~~~l~~a--~i~~ad~vi~~~~   74 (218)
T 3l4b_C            3 VIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-KATIIHGDGSHKEILRDA--EVSKNDVVVILTP   74 (218)
T ss_dssp             EEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-SSEEEESCTTSHHHHHHH--TCCTTCEEEECCS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-CCeEEEcCCCCHHHHHhc--CcccCCEEEEecC
Confidence            456675 88999999999999999999999999988876554 567899999998877655  2345788887664

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.59  E-value=5.5e-05  Score=55.06  Aligned_cols=74  Identities=12%  Similarity=0.050  Sum_probs=54.8

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ..++|.|+ |.+|..+++.|.+.|++|++++|++++.+.+... .+...+..|.++++.+.+.  .+...|++|.+.+
T Consensus        20 ~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~-~g~~~~~~d~~~~~~l~~~--~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           20 KYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSE-FSGFTVVGDAAEFETLKEC--GMEKADMVFAFTN   93 (155)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTT-CCSEEEESCTTSHHHHHTT--TGGGCSEEEECSS
T ss_pred             CcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhc-CCCcEEEecCCCHHHHHHc--CcccCCEEEEEeC
Confidence            34566775 8999999999999999999999999887655422 2455677888887654432  1235799998876

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.58  E-value=0.0001  Score=60.32  Aligned_cols=73  Identities=12%  Similarity=0.062  Sum_probs=51.0

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEccCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNAAV   91 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~ag~   91 (238)
                      .++|+||+|++|..+++.+...|++|+++++++++.+.+++.... ..  .|..+.+  .+.++.+  +++|++|.++|.
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~-~~--i~~~~~~--~~~~~~~~~~~~d~vid~~g~  226 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAK-EV--LAREDVM--AERIRPLDKQRWAAAVDPVGG  226 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCS-EE--EECC-----------CCSCCEEEEEECSTT
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCc-EE--EecCCcH--HHHHHHhcCCcccEEEECCcH
Confidence            689999999999999999989999999999998888777654322 12  4554432  2223333  369999999984

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.54  E-value=0.0001  Score=58.92  Aligned_cols=73  Identities=11%  Similarity=0.075  Sum_probs=53.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.+.++|+|+ ||+|++++..|++.|+ +|.+.+|+.++.+++.+++........+..+   +..     ...|++||+.
T Consensus       119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~---l~~-----~~~DivInaT  189 (272)
T 3pwz_A          119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA---LEG-----QSFDIVVNAT  189 (272)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG---GTT-----CCCSEEEECS
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH---hcc-----cCCCEEEECC
Confidence            4567788887 7999999999999996 9999999999999888776531111222222   111     3589999998


Q ss_pred             CCC
Q psy14567         90 AVA   92 (238)
Q Consensus        90 g~~   92 (238)
                      ...
T Consensus       190 p~g  192 (272)
T 3pwz_A          190 SAS  192 (272)
T ss_dssp             SGG
T ss_pred             CCC
Confidence            654

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.54  E-value=0.00033  Score=58.16  Aligned_cols=81  Identities=14%  Similarity=0.017  Sum_probs=60.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCE-EEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc---CCccEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAI-IIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV---GPVDVL   85 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~---g~id~l   85 (238)
                      +...+++|.|+ |++|...+..+...|++ |+++++++++.+.+++....+..+..|-.+.+++.+.+.+.   ..+|++
T Consensus       178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvv  256 (363)
T 3m6i_A          178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVA  256 (363)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHCTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhchhcccccccccchHHHHHHHHHHhCCCCCCEE
Confidence            44567788898 99999999988889997 99999999998877766334444555555556655555443   269999


Q ss_pred             EEccCC
Q psy14567         86 INNAAV   91 (238)
Q Consensus        86 i~~ag~   91 (238)
                      |.++|.
T Consensus       257 id~~g~  262 (363)
T 3m6i_A          257 LECTGV  262 (363)
T ss_dssp             EECSCC
T ss_pred             EECCCC
Confidence            999884

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.53  E-value=0.00019  Score=59.76  Aligned_cols=76  Identities=16%  Similarity=0.175  Sum_probs=57.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ...+++|+|+ |+||..+++.+...|++|+++++++++.+.+.+.++--.  ..|..+.+.++++   .+.+|++|+++|
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~--v~~~~~~~~~~~~---~~~~D~vid~~g  260 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS--FLVSRDQEQMQAA---AGTLDGIIDTVS  260 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE--EEETTCHHHHHHT---TTCEEEEEECCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce--EEeccCHHHHHHh---hCCCCEEEECCC
Confidence            4457788886 999999999999999999999999998877764443222  2566666554433   257999999998


Q ss_pred             CC
Q psy14567         91 VA   92 (238)
Q Consensus        91 ~~   92 (238)
                      ..
T Consensus       261 ~~  262 (366)
T 1yqd_A          261 AV  262 (366)
T ss_dssp             SC
T ss_pred             cH
Confidence            53

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.53  E-value=0.00016  Score=60.45  Aligned_cols=78  Identities=12%  Similarity=0.170  Sum_probs=54.5

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +...+++|+||+|+||..++..+...|++|++++ ++++.+.+.+...+ .  ..|.++.+..+ .+.+.+++|++|+++
T Consensus       182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa~-~--v~~~~~~~~~~-~~~~~~g~D~vid~~  256 (375)
T 2vn8_A          182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKLGAD-D--VIDYKSGSVEE-QLKSLKPFDFILDNV  256 (375)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTCS-E--EEETTSSCHHH-HHHTSCCBSEEEESS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHcCCC-E--EEECCchHHHH-HHhhcCCCCEEEECC
Confidence            4556889999999999999999989999999888 45666655443322 2  23555433223 333346799999999


Q ss_pred             CCC
Q psy14567         90 AVA   92 (238)
Q Consensus        90 g~~   92 (238)
                      |..
T Consensus       257 g~~  259 (375)
T 2vn8_A          257 GGS  259 (375)
T ss_dssp             CTT
T ss_pred             CCh
Confidence            853

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.51  E-value=0.00012  Score=54.68  Aligned_cols=73  Identities=11%  Similarity=0.021  Sum_probs=56.4

Q ss_pred             CCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      .++|.| .|.+|..+++.|.+. |+.|+++++++++.+.+.+.  +...+..|.++++.+.++ ..+.+.|.+|.+.+
T Consensus        41 ~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~--g~~~~~gd~~~~~~l~~~-~~~~~ad~vi~~~~  114 (183)
T 3c85_A           41 QVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE--GRNVISGDATDPDFWERI-LDTGHVKLVLLAMP  114 (183)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT--TCCEEECCTTCHHHHHTB-CSCCCCCEEEECCS
T ss_pred             cEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC--CCCEEEcCCCCHHHHHhc-cCCCCCCEEEEeCC
Confidence            456667 489999999999999 99999999999998887654  456778899987754432 01346899988775

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.49  E-value=0.00011  Score=61.26  Aligned_cols=71  Identities=8%  Similarity=0.069  Sum_probs=53.0

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh---HhHHHHHhhCCCceEEEeecCC--HHHHHHHHHhcCCccEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ---ANLDSLKQAFPNVQTVQVDLQD--WARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~g~id~li   86 (238)
                      ..+++|+|+ |+||..+++.+...|++|++++++.   ++.+.+.+..  ...+  | ++  .+.+.+ . . +++|++|
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~g--a~~v--~-~~~~~~~~~~-~-~-~~~d~vi  251 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETK--TNYY--N-SSNGYDKLKD-S-V-GKFDVII  251 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHHT--CEEE--E-CTTCSHHHHH-H-H-CCEEEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHhC--Ccee--c-hHHHHHHHHH-h-C-CCCCEEE
Confidence            567899999 9999999999999999999999998   7776555443  2333  5 44  223333 2 2 6799999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      +++|.
T Consensus       252 d~~g~  256 (366)
T 2cdc_A          252 DATGA  256 (366)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99985

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.43  E-value=0.00029  Score=57.96  Aligned_cols=77  Identities=14%  Similarity=0.067  Sum_probs=56.5

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +...+++|+|+ |++|...+..+...|++|+++++++++.+.+++.....   ..|..+.+..+.+.+..+.+|++|.++
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~---~i~~~~~~~~~~~~~~~g~~d~vid~~  240 (340)
T 3s2e_A          165 RPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRLGAEV---AVNARDTDPAAWLQKEIGGAHGVLVTA  240 (340)
T ss_dssp             CTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSE---EEETTTSCHHHHHHHHHSSEEEEEESS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCE---EEeCCCcCHHHHHHHhCCCCCEEEEeC
Confidence            34557788886 89999999999899999999999999988776654332   245554443444444446799999998


Q ss_pred             C
Q psy14567         90 A   90 (238)
Q Consensus        90 g   90 (238)
                      |
T Consensus       241 g  241 (340)
T 3s2e_A          241 V  241 (340)
T ss_dssp             C
T ss_pred             C
Confidence            7

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.41  E-value=4.6e-05  Score=54.73  Aligned_cols=71  Identities=11%  Similarity=0.069  Sum_probs=52.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      .+.++|.|+ |++|..+++.|.+.|++|.+.+|+.++.+++.++++ ...  .+..+   +.+.++   ..|++|.+.+.
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~-~~~--~~~~~---~~~~~~---~~Divi~at~~   90 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE-YEY--VLIND---IDSLIK---NNDVIITATSS   90 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT-CEE--EECSC---HHHHHH---TCSEEEECSCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC-Cce--EeecC---HHHHhc---CCCEEEEeCCC
Confidence            445667785 899999999999999999999999999888776654 221  22333   333444   47999999875


Q ss_pred             C
Q psy14567         92 A   92 (238)
Q Consensus        92 ~   92 (238)
                      .
T Consensus        91 ~   91 (144)
T 3oj0_A           91 K   91 (144)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.40  E-value=0.0019  Score=52.56  Aligned_cols=144  Identities=11%  Similarity=0.133  Sum_probs=82.4

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC--EEEEecC--ChHhHHH----HHhhCCCceEEEeecCCH-HHHHHHHHhcCCccEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA--IIIALSK--TQANLDS----LKQAFPNVQTVQVDLQDW-ARTRAAVSKVGPVDVL   85 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r--~~~~~~~----~~~~~~~~~~~~~D~~~~-~~v~~~~~~~g~id~l   85 (238)
                      ++||||+|.+|.+++..|+..|.  .+.++++  ++++++.    +.+..+ .....+++++. +++.+.   +...|++
T Consensus         3 I~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~-~~~~~~~i~~~~d~l~~a---l~gaD~V   78 (313)
T 1hye_A            3 VTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALA-GTRSDANIYVESDENLRI---IDESDVV   78 (313)
T ss_dssp             EEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHT-TSCCCCEEEEEETTCGGG---GTTCSEE
T ss_pred             EEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHH-hcCCCeEEEeCCcchHHH---hCCCCEE
Confidence            57899999999999999998874  6888888  6654332    222111 00011222211 111222   3358999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccc--------cccCCCCchhhH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAG--------KTALEGHTIYSA  157 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--------~~~~~~~~~y~~  157 (238)
                      |++||.....   ..+.    ...++.|+..+..+.+++..+-     .+.++++|.-..        ..+.+..-.++.
T Consensus        79 i~~Ag~~~~~---g~~r----~dl~~~N~~i~~~i~~~i~~~~-----~~~vlv~SNPv~~~t~~~~k~~~~p~~rviG~  146 (313)
T 1hye_A           79 IITSGVPRKE---GMSR----MDLAKTNAKIVGKYAKKIAEIC-----DTKIFVITNPVDVMTYKALVDSKFERNQVFGL  146 (313)
T ss_dssp             EECCSCCCCT---TCCH----HHHHHHHHHHHHHHHHHHHHHC-----CCEEEECSSSHHHHHHHHHHHHCCCTTSEEEC
T ss_pred             EECCCCCCCC---CCcH----HHHHHHHHHHHHHHHHHHHHhC-----CeEEEEecCcHHHHHHHHHHhhCcChhcEEEe
Confidence            9999975321   2222    3347888888888888776542     345555554332        112344445555


Q ss_pred             -HHHHHHHHHHHHHHHhC
Q psy14567        158 -SKAALDSITRTMALELG  174 (238)
Q Consensus       158 -sK~al~~l~~~l~~~~~  174 (238)
                       +..--..+...++..+.
T Consensus       147 gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          147 GTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             TTHHHHHHHHHHHHHHHT
T ss_pred             CccHHHHHHHHHHHHHhC
Confidence             44445555666666664

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.38  E-value=0.00027  Score=56.66  Aligned_cols=70  Identities=19%  Similarity=0.229  Sum_probs=52.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCC---ceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPN---VQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      +.++++|+|+ ||+|++++..|++.|+ +|.+.+|+.++.+++.+.+..   +...  +..+   +.      ...|++|
T Consensus       125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~--~~~~---l~------~~aDiII  192 (281)
T 3o8q_A          125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQ--AFEQ---LK------QSYDVII  192 (281)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEE--EGGG---CC------SCEEEEE
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEe--eHHH---hc------CCCCEEE
Confidence            4567788887 7999999999999996 999999999998888776542   2222  2221   11      3589999


Q ss_pred             EccCCC
Q psy14567         87 NNAAVA   92 (238)
Q Consensus        87 ~~ag~~   92 (238)
                      ++.+..
T Consensus       193 naTp~g  198 (281)
T 3o8q_A          193 NSTSAS  198 (281)
T ss_dssp             ECSCCC
T ss_pred             EcCcCC
Confidence            998654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.35  E-value=0.00035  Score=57.71  Aligned_cols=77  Identities=9%  Similarity=-0.000  Sum_probs=54.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      ...+++|+|+ |++|..+++.+...|+ +|+++++++++.+.+.+.....   ..|..+++-.+.+.+..  ..+|++|.
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~---~~~~~~~~~~~~v~~~~~g~g~D~vid  242 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADY---VINPFEEDVVKEVMDITDGNGVDVFLE  242 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSE---EECTTTSCHHHHHHHHTTTSCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCE---EECCCCcCHHHHHHHHcCCCCCCEEEE
Confidence            4557889999 9999999999999999 9999999998887776544321   24554433222232222  25999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      ++|.
T Consensus       243 ~~g~  246 (348)
T 2d8a_A          243 FSGA  246 (348)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            9984

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.33  E-value=0.00067  Score=55.01  Aligned_cols=106  Identities=10%  Similarity=0.079  Sum_probs=64.6

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC--EEEEecC--ChHhHHH----HHhh---CCCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA--IIIALSK--TQANLDS----LKQA---FPNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r--~~~~~~~----~~~~---~~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      ++||||+|.+|.+++..|+..|.  +++++++  ++++++.    +.+.   ..++.+.. +  +.       +.+...|
T Consensus         3 I~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~-------~a~~~aD   72 (303)
T 1o6z_A            3 VSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GY-------EDTAGSD   72 (303)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CG-------GGGTTCS
T ss_pred             EEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CH-------HHhCCCC
Confidence            57899999999999999998875  6888988  7655432    2111   11222222 1  11       1234589


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEc
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS  141 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~is  141 (238)
                      ++|++||.....   ..+..    ..+..|+.....+.+.+..    ..+.+.++++|
T Consensus        73 vVi~~ag~~~~~---g~~r~----dl~~~N~~i~~~i~~~i~~----~~p~~~viv~S  119 (303)
T 1o6z_A           73 VVVITAGIPRQP---GQTRI----DLAGDNAPIMEDIQSSLDE----HNDDYISLTTS  119 (303)
T ss_dssp             EEEECCCCCCCT---TCCHH----HHHHHHHHHHHHHHHHHHT----TCSCCEEEECC
T ss_pred             EEEEcCCCCCCC---CCCHH----HHHHHHHHHHHHHHHHHHH----HCCCcEEEEeC
Confidence            999999975321   22222    3367888887777766643    33244555443

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.25  E-value=0.00099  Score=55.05  Aligned_cols=78  Identities=13%  Similarity=0.009  Sum_probs=54.5

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCC----HHHHHHHHHh--cCCcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQD----WARTRAAVSK--VGPVD   83 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~----~~~v~~~~~~--~g~id   83 (238)
                      +...+++|+|+ |++|...+..+...|++|+++++++++.+.+.+...+ ..  .|.++    .+.+.+....  -+++|
T Consensus       167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~~--~~~~~~~~~~~~i~~~~~~~~g~g~D  242 (352)
T 1e3j_A          167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGAD-VT--LVVDPAKEEESSIIERIRSAIGDLPN  242 (352)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS-EE--EECCTTTSCHHHHHHHHHHHSSSCCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCC-EE--EcCcccccHHHHHHHHhccccCCCCC
Confidence            34557788996 8999999998888999999999999988777654433 22  34442    2334333320  13699


Q ss_pred             EEEEccCC
Q psy14567         84 VLINNAAV   91 (238)
Q Consensus        84 ~li~~ag~   91 (238)
                      ++|+++|.
T Consensus       243 ~vid~~g~  250 (352)
T 1e3j_A          243 VTIDCSGN  250 (352)
T ss_dssp             EEEECSCC
T ss_pred             EEEECCCC
Confidence            99999984

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.23  E-value=0.00035  Score=56.99  Aligned_cols=69  Identities=16%  Similarity=0.086  Sum_probs=51.7

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEccC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNAA   90 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~ag   90 (238)
                      ++|+||+|++|...+..+...|++|+++++++++.+.+++...+. .  .|..+.+.    ++++  +++|++|.++|
T Consensus       150 VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-v--i~~~~~~~----~~~~~~~~~d~v~d~~g  220 (324)
T 3nx4_A          150 VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKSLGANR-I--LSRDEFAE----SRPLEKQLWAGAIDTVG  220 (324)
T ss_dssp             EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTCSE-E--EEGGGSSC----CCSSCCCCEEEEEESSC
T ss_pred             EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCCE-E--EecCCHHH----HHhhcCCCccEEEECCC
Confidence            889999999999999999999999999999999988877654332 2  23333221    2222  46899988876

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.18  E-value=0.0012  Score=55.10  Aligned_cols=78  Identities=13%  Similarity=0.071  Sum_probs=55.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhCCCceEEEeecC--CHHHHHHHHHhc--C-Ccc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAFPNVQTVQVDLQ--DWARTRAAVSKV--G-PVD   83 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~--~~~~v~~~~~~~--g-~id   83 (238)
                      +...+++|+| +|++|...++.+...| ++|+++++++++.+.+.+.... .+  .|..  +.+++.+.+.+.  + ++|
T Consensus       194 ~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~-~v--i~~~~~~~~~~~~~v~~~~~g~g~D  269 (380)
T 1vj0_A          194 FAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD-LT--LNRRETSVEERRKAIMDITHGRGAD  269 (380)
T ss_dssp             CBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS-EE--EETTTSCHHHHHHHHHHHTTTSCEE
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCc-EE--EeccccCcchHHHHHHHHhCCCCCc
Confidence            3456788999 8999999999988899 5999999999988777654322 22  3443  134444444333  2 599


Q ss_pred             EEEEccCC
Q psy14567         84 VLINNAAV   91 (238)
Q Consensus        84 ~li~~ag~   91 (238)
                      ++|.++|.
T Consensus       270 vvid~~g~  277 (380)
T 1vj0_A          270 FILEATGD  277 (380)
T ss_dssp             EEEECSSC
T ss_pred             EEEECCCC
Confidence            99999984

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.17  E-value=0.0013  Score=53.73  Aligned_cols=116  Identities=9%  Similarity=0.086  Sum_probs=61.9

Q ss_pred             eeeCCCCcCCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhC-------CCceEEEeecCCHHHHHHH
Q psy14567          5 AKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAA   75 (238)
Q Consensus         5 ~~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~   75 (238)
                      ++..+++...+.|+|+ |++|.+++..|+..|.  ++++++++++.++.....+       +++.....|   .      
T Consensus         2 ~~~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~------   71 (326)
T 3vku_A            2 ASITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---Y------   71 (326)
T ss_dssp             -----CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---G------
T ss_pred             cccccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---H------
Confidence            4566666666777886 9999999999998886  8999999988766332221       122222111   1      


Q ss_pred             HHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         76 VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        76 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                       +.+..-|++|.+||.....   .++..    ..++.|..-.    +...+.+.+..+.+.++.+|.
T Consensus        72 -~a~~~aDiVvi~ag~~~kp---G~tR~----dL~~~N~~I~----~~i~~~i~~~~p~a~ilvvtN  126 (326)
T 3vku_A           72 -SDAKDADLVVITAGAPQKP---GETRL----DLVNKNLKIL----KSIVDPIVDSGFNGIFLVAAN  126 (326)
T ss_dssp             -GGGTTCSEEEECCCCC-----------------------CH----HHHHHHHHTTTCCSEEEECSS
T ss_pred             -HHhcCCCEEEECCCCCCCC---CchHH----HHHHHHHHHH----HHHHHHHHhcCCceEEEEccC
Confidence             2234579999999975321   22222    2244554444    444444444444567777764

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.16  E-value=0.0012  Score=53.71  Aligned_cols=110  Identities=15%  Similarity=0.159  Sum_probs=65.3

Q ss_pred             CCCCCCCCchHHHHHHHHhhCC--CEEEEecCChHhH--HHHHhhCCCceEEEeecCC---HHHHHHHHHhcCCccEEEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANL--DSLKQAFPNVQTVQVDLQD---WARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~--~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~~g~id~li~   87 (238)
                      +.|+||+|.+|.+++..|+..|  ..|+++++++...  .++.+....     .++..   .++.++.++   .-|++|+
T Consensus         3 I~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~~~-----~~l~~~~~t~d~~~a~~---~aDvVvi   74 (314)
T 1mld_A            3 VAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETR-----ATVKGYLGPEQLPDCLK---GCDVVVI   74 (314)
T ss_dssp             EEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSS-----CEEEEEESGGGHHHHHT---TCSEEEE
T ss_pred             EEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccCcC-----ceEEEecCCCCHHHHhC---CCCEEEE
Confidence            4678999999999999999888  6899999987221  122221111     12211   122333444   4799999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccc
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSI  143 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  143 (238)
                      ++|.....   .++..+    .+..|......+.+.+.+    ..+.+.++++|--
T Consensus        75 ~ag~~~~~---g~~r~d----l~~~n~~i~~~i~~~i~~----~~p~a~viv~sNP  119 (314)
T 1mld_A           75 PAGVPRKP---GMTRDD----LFNTNATIVATLTAACAQ----HCPDAMICIISNP  119 (314)
T ss_dssp             CCSCCCCT---TCCGGG----GHHHHHHHHHHHHHHHHH----HCTTSEEEECSSC
T ss_pred             CCCcCCCC---CCcHHH----HHHHHHHHHHHHHHHHHh----hCCCeEEEEECCC
Confidence            99976422   222222    245666655555555543    3335788887543

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.16  E-value=0.0013  Score=54.63  Aligned_cols=76  Identities=12%  Similarity=0.003  Sum_probs=54.5

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--C-CccEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--G-PVDVLI   86 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g-~id~li   86 (238)
                      +...+++|+| +|++|...+..+...|++|+++++++++.+.+.+..... .  .| .+.+++.+.+.+.  + ++|++|
T Consensus       188 ~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-v--i~-~~~~~~~~~v~~~~~g~g~D~vi  262 (363)
T 3uog_A          188 RAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGADH-G--IN-RLEEDWVERVYALTGDRGADHIL  262 (363)
T ss_dssp             CTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTCSE-E--EE-TTTSCHHHHHHHHHTTCCEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCCCE-E--Ec-CCcccHHHHHHHHhCCCCceEEE
Confidence            3456788899 899999999999999999999999999888776654322 2  34 3322233333222  2 699999


Q ss_pred             EccC
Q psy14567         87 NNAA   90 (238)
Q Consensus        87 ~~ag   90 (238)
                      .++|
T Consensus       263 d~~g  266 (363)
T 3uog_A          263 EIAG  266 (363)
T ss_dssp             EETT
T ss_pred             ECCC
Confidence            9998

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.15  E-value=0.0005  Score=53.40  Aligned_cols=69  Identities=12%  Similarity=-0.026  Sum_probs=55.2

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ++|.|+ |.+|..+++.|.+.|+ |++++++++..+.+.   .++.++..|.++++.++++  .+.+.|.+|.+.+
T Consensus        12 viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---~~~~~i~gd~~~~~~l~~a--~i~~ad~vi~~~~   80 (234)
T 2aef_A           12 VVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR---SGANFVHGDPTRVSDLEKA--NVRGARAVIVDLE   80 (234)
T ss_dssp             EEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---TTCEEEESCTTCHHHHHHT--TCTTCSEEEECCS
T ss_pred             EEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---cCCeEEEcCCCCHHHHHhc--CcchhcEEEEcCC
Confidence            456676 8999999999999999 999999998887776   4688899999998876554  1335788887764

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.14  E-value=0.0017  Score=53.33  Aligned_cols=111  Identities=14%  Similarity=0.167  Sum_probs=64.2

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC--E-----EEEecCCh--HhH----HHHHhh-CCCceEEEeecCCHHHHHHHHHhc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA--I-----IIALSKTQ--ANL----DSLKQA-FPNVQTVQVDLQDWARTRAAVSKV   79 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~--~-----V~~~~r~~--~~~----~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~   79 (238)
                      .+.||||+|+||.+++..|+..|.  .     ++++++++  +.+    .++... .+-.  .....++  ...   +.+
T Consensus         5 kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~--~~~~~~~--~~~---~~~   77 (333)
T 5mdh_A            5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLL--KDVIATD--KEE---IAF   77 (333)
T ss_dssp             EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTE--EEEEEES--CHH---HHT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhccc--CCEEEcC--CcH---HHh
Confidence            467899999999999999998775  4     89999874  222    233332 1222  1122221  111   223


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc-eEEEEcc
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG-SIVNVSS  142 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g-~iv~isS  142 (238)
                      ..-|++|++||.....   .++..+    .++.|......+.+.+    .+...++ +++.+|.
T Consensus        78 ~daDvVvitAg~prkp---G~tR~d----ll~~N~~i~~~i~~~i----~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           78 KDLDVAILVGSMPRRD---GMERKD----LLKANVKIFKCQGAAL----DKYAKKSVKVIVVGN  130 (333)
T ss_dssp             TTCSEEEECCSCCCCT---TCCTTT----THHHHHHHHHHHHHHH----HHHSCTTCEEEECSS
T ss_pred             CCCCEEEEeCCCCCCC---CCCHHH----HHHHHHHHHHHHHHHH----HHhCCCCeEEEEcCC
Confidence            3579999999865321   223322    2556766665555554    4444345 5777765

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.12  E-value=0.0012  Score=54.93  Aligned_cols=78  Identities=10%  Similarity=-0.034  Sum_probs=54.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEEc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLINN   88 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~~   88 (238)
                      +...+++|.||+|++|...+..+...|++|+.+. ++++.+.+.+... -.+  .|..+++-.+.+.+.. +++|++|.+
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~~lGa-~~v--i~~~~~~~~~~v~~~t~g~~d~v~d~  238 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAKSRGA-EEV--FDYRAPNLAQTIRTYTKNNLRYALDC  238 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHTTC-SEE--EETTSTTHHHHHHHHTTTCCCEEEES
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHHHcCC-cEE--EECCCchHHHHHHHHccCCccEEEEC
Confidence            4556789999999999999999999999998886 6777765554332 222  4555543333333322 469999999


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      +|.
T Consensus       239 ~g~  241 (371)
T 3gqv_A          239 ITN  241 (371)
T ss_dssp             SCS
T ss_pred             CCc
Confidence            985

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=97.09  E-value=0.0001  Score=60.36  Aligned_cols=72  Identities=14%  Similarity=0.097  Sum_probs=51.2

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEccC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNAA   90 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~ag   90 (238)
                      .++|+||+|++|..+++.+...|++|+++++++++.+.+.+..... .  .|..+.+  .+.++++  +.+|++|.++|
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa~~-v--~~~~~~~--~~~~~~~~~~~~d~vid~~g  226 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASE-V--ISREDVY--DGTLKALSKQQWQGAVDPVG  226 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSE-E--EEHHHHC--SSCCCSSCCCCEEEEEESCC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCcE-E--EECCCch--HHHHHHhhcCCccEEEECCc
Confidence            6899999999999999999889999999999988877776544321 2  3332211  1112222  36899999987

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.08  E-value=0.001  Score=55.35  Aligned_cols=75  Identities=16%  Similarity=0.165  Sum_probs=55.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +...+++|+|+ |++|...+..+...|++|+++++++++.+.+.+....   ...|..+.+.++++.   +++|++|.++
T Consensus       193 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~lGa~---~vi~~~~~~~~~~~~---~g~Dvvid~~  265 (369)
T 1uuf_A          193 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGAD---EVVNSRNADEMAAHL---KSFDFILNTV  265 (369)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCS---EEEETTCHHHHHTTT---TCEEEEEECC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCc---EEeccccHHHHHHhh---cCCCEEEECC
Confidence            34556788887 8899999998888999999999999988877664432   124666654333222   5799999999


Q ss_pred             CC
Q psy14567         90 AV   91 (238)
Q Consensus        90 g~   91 (238)
                      |.
T Consensus       266 g~  267 (369)
T 1uuf_A          266 AA  267 (369)
T ss_dssp             SS
T ss_pred             CC
Confidence            85

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.06  E-value=0.001  Score=55.10  Aligned_cols=76  Identities=20%  Similarity=0.139  Sum_probs=55.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--C-CccEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--G-PVDVL   85 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g-~id~l   85 (238)
                      +...+++|+|+ |++|...+..+... |++|+++++++++.+.+.+...+ .  ..|.+++  +.+.+.++  + ++|++
T Consensus       185 ~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~lGa~-~--vi~~~~~--~~~~v~~~~~g~g~Dvv  258 (359)
T 1h2b_A          185 YPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGAD-H--VVDARRD--PVKQVMELTRGRGVNVA  258 (359)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCS-E--EEETTSC--HHHHHHHHTTTCCEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCC-E--EEeccch--HHHHHHHHhCCCCCcEE
Confidence            34567889999 89999999988888 99999999999988777654322 1  2455553  33333333  3 69999


Q ss_pred             EEccCC
Q psy14567         86 INNAAV   91 (238)
Q Consensus        86 i~~ag~   91 (238)
                      |.++|.
T Consensus       259 id~~G~  264 (359)
T 1h2b_A          259 MDFVGS  264 (359)
T ss_dssp             EESSCC
T ss_pred             EECCCC
Confidence            999984

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.06  E-value=0.00057  Score=56.80  Aligned_cols=76  Identities=14%  Similarity=0.107  Sum_probs=53.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhh-CCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQ-HEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      ...+++|+||+|++|...+..+.. .|++|+++++++++.+.+.+...+. +  .|.++  +..+.+.+.  +.+|++|.
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGad~-v--i~~~~--~~~~~v~~~~~~g~Dvvid  245 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHH-V--IDHSK--PLAAEVAALGLGAPAFVFS  245 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTCSE-E--ECTTS--CHHHHHHTTCSCCEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCCCE-E--EeCCC--CHHHHHHHhcCCCceEEEE
Confidence            455788999999999998887765 5899999999999887776644321 2  34433  233333333  46999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      ++|.
T Consensus       246 ~~g~  249 (363)
T 4dvj_A          246 TTHT  249 (363)
T ss_dssp             CSCH
T ss_pred             CCCc
Confidence            9873

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.05  E-value=0.00065  Score=54.41  Aligned_cols=68  Identities=16%  Similarity=0.204  Sum_probs=50.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.+.++|.|+ ||.|++++..|++.|+ +|.+++|+.++.+++.+.+.   .  .+   .+++.+    + ..|++||+.
T Consensus       121 ~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~--~~---~~~l~~----l-~~DivInaT  186 (282)
T 3fbt_A          121 KNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---V--IS---YDELSN----L-KGDVIINCT  186 (282)
T ss_dssp             TTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---E--EE---HHHHTT----C-CCSEEEECS
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---c--cc---HHHHHh----c-cCCEEEECC
Confidence            3455667776 6999999999999998 99999999999888876542   1  12   233332    3 689999998


Q ss_pred             CCC
Q psy14567         90 AVA   92 (238)
Q Consensus        90 g~~   92 (238)
                      ...
T Consensus       187 p~G  189 (282)
T 3fbt_A          187 PKG  189 (282)
T ss_dssp             STT
T ss_pred             ccC
Confidence            653

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.04  E-value=0.00017  Score=57.69  Aligned_cols=70  Identities=10%  Similarity=0.137  Sum_probs=49.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.+.++|+|+ ||+|++++..|++.|+ +|.+++|+.++.+++.+.   +..     ...+++.+.++   ..|++|++.
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~---~~~-----~~~~~~~~~~~---~aDiVInaT  183 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN---INK-----INLSHAESHLD---EFDIIINTT  183 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC---CEE-----ECHHHHHHTGG---GCSEEEECC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh---ccc-----ccHhhHHHHhc---CCCEEEECc
Confidence            4556777886 7999999999999999 899999999887665532   211     12344444433   479999998


Q ss_pred             CCC
Q psy14567         90 AVA   92 (238)
Q Consensus        90 g~~   92 (238)
                      ...
T Consensus       184 p~G  186 (277)
T 3don_A          184 PAG  186 (277)
T ss_dssp             C--
T ss_pred             cCC
Confidence            643

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.02  E-value=0.00098  Score=54.89  Aligned_cols=76  Identities=9%  Similarity=0.033  Sum_probs=53.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhC--CCEEEEecCChHhHHHHHhhCCCceEEEeecCC-HHHHHHHHHhcCCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQH--EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQD-WARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~g~id~li~   87 (238)
                      ...+++|+|+ |++|...+..+...  |++|+++++++++.+.+++...+. +  .|..+ ++.++++.+ -.++|++|.
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-v--i~~~~~~~~~~~~~~-g~g~D~vid  244 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADY-V--SEMKDAESLINKLTD-GLGASIAID  244 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTCSE-E--ECHHHHHHHHHHHHT-TCCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCCCE-E--eccccchHHHHHhhc-CCCccEEEE
Confidence            4557788999 89999999988888  999999999999887776654321 1  34433 332322222 126999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      ++|.
T Consensus       245 ~~g~  248 (344)
T 2h6e_A          245 LVGT  248 (344)
T ss_dssp             SSCC
T ss_pred             CCCC
Confidence            9984

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.01  E-value=0.0021  Score=53.17  Aligned_cols=78  Identities=10%  Similarity=0.014  Sum_probs=54.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecC--C-HHHHHHHHHhc-CCccE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQ--D-WARTRAAVSKV-GPVDV   84 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~--~-~~~v~~~~~~~-g~id~   84 (238)
                      +...+++|+|+ |++|...+..+...|+ +|+++++++++.+.+.+.... ..  .|..  + .+..+++.+.. +++|+
T Consensus       170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~v--i~~~~~~~~~~~~~i~~~~~~g~D~  245 (356)
T 1pl8_A          170 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD-LV--LQISKESPQEIARKVEGQLGCKPEV  245 (356)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS-EE--EECSSCCHHHHHHHHHHHHTSCCSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCC-EE--EcCcccccchHHHHHHHHhCCCCCE
Confidence            34456788886 8999999998888999 999999999888777654432 22  3544  2 33233332222 46999


Q ss_pred             EEEccCC
Q psy14567         85 LINNAAV   91 (238)
Q Consensus        85 li~~ag~   91 (238)
                      +|.++|.
T Consensus       246 vid~~g~  252 (356)
T 1pl8_A          246 TIECTGA  252 (356)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9999983

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.01  E-value=0.00097  Score=55.59  Aligned_cols=77  Identities=17%  Similarity=0.154  Sum_probs=53.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCC-HHHHHHHHHhc--CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQD-WARTRAAVSKV--GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~--g~id~li   86 (238)
                      ...+++|+|+ |++|..++..+...|+ +|+++++++++.+.+++.... ..  .|.++ .+++.+.+.+.  +++|++|
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~-~v--i~~~~~~~~~~~~~~~~~~~g~D~vi  266 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT-EC--VNPQDYKKPIQEVLTEMSNGGVDFSF  266 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS-EE--ECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc-eE--ecccccchhHHHHHHHHhCCCCcEEE
Confidence            4457788885 9999999999888999 899999999988777654322 22  34442 11233333322  4799999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .++|.
T Consensus       267 d~~g~  271 (374)
T 2jhf_A          267 EVIGR  271 (374)
T ss_dssp             ECSCC
T ss_pred             ECCCC
Confidence            99985

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.00  E-value=0.0013  Score=54.99  Aligned_cols=79  Identities=6%  Similarity=0.027  Sum_probs=55.1

Q ss_pred             CcCCCCCCC-CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         11 RTNTKGGDY-PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG-~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      ...+++|.| |+|++|...+..+...|++|+++++++++.+.+.+..... .  .|..+++..+++.+..  ..+|++|.
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-~--~~~~~~~~~~~v~~~t~~~g~d~v~d  246 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKAQGAVH-V--CNAASPTFMQDLTEALVSTGATIAFD  246 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHTTCSC-E--EETTSTTHHHHHHHHHHHHCCCEEEE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCcE-E--EeCCChHHHHHHHHHhcCCCceEEEE
Confidence            345667776 9999999999988889999999999999988777644332 2  3444433222222222  25999999


Q ss_pred             ccCCC
Q psy14567         88 NAAVA   92 (238)
Q Consensus        88 ~ag~~   92 (238)
                      ++|..
T Consensus       247 ~~g~~  251 (379)
T 3iup_A          247 ATGGG  251 (379)
T ss_dssp             SCEEE
T ss_pred             CCCch
Confidence            99853

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.99  E-value=0.00095  Score=56.35  Aligned_cols=73  Identities=12%  Similarity=0.140  Sum_probs=53.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      ...++++|.|+ |++|+.+++.|...|+ +|++++|+.++.+++.+.++ ...  .+..   ++.+.+.   ..|++|.+
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g-~~~--~~~~---~l~~~l~---~aDvVi~a  234 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG-GEA--VRFD---ELVDHLA---RSDVVVSA  234 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT-CEE--CCGG---GHHHHHH---TCSEEEEC
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC-Cce--ecHH---hHHHHhc---CCCEEEEc
Confidence            35567778887 9999999999999998 99999999988766665543 221  2332   3344444   47999999


Q ss_pred             cCCC
Q psy14567         89 AAVA   92 (238)
Q Consensus        89 ag~~   92 (238)
                      .|..
T Consensus       235 t~~~  238 (404)
T 1gpj_A          235 TAAP  238 (404)
T ss_dssp             CSSS
T ss_pred             cCCC
Confidence            8643

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.97  E-value=0.0005  Score=57.03  Aligned_cols=75  Identities=11%  Similarity=-0.028  Sum_probs=54.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCH-HHHHHHHHhcCCccEEEEc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDW-ARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~g~id~li~~   88 (238)
                      +...+++|+|+ |++|..++..+...|++|+++++++++.+.+.+..... +  .|..+. +..+++ .  +++|++|.+
T Consensus       178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa~~-v--~~~~~~~~~~~~~-~--~~~D~vid~  250 (360)
T 1piw_A          178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADH-Y--IATLEEGDWGEKY-F--DTFDLIVVC  250 (360)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSE-E--EEGGGTSCHHHHS-C--SCEEEEEEC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCCCE-E--EcCcCchHHHHHh-h--cCCCEEEEC
Confidence            34567889999 99999999988889999999999998887776644321 2  354433 222211 1  579999999


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      +|.
T Consensus       251 ~g~  253 (360)
T 1piw_A          251 ASS  253 (360)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            986

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.93  E-value=0.00046  Score=56.90  Aligned_cols=113  Identities=6%  Similarity=0.085  Sum_probs=63.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHH----HHhhC-CCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDS----LKQAF-PNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~----~~~~~-~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      +...+.|+|++|++|.+++..++..|.  +|+++++++++++.    +.... +...   ...+  .+..+.++   .-|
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~---i~~t--~d~~~al~---dAD   78 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLN---LTFT--SDIKEALT---DAK   78 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCC---CEEE--SCHHHHHT---TEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCc---eEEc--CCHHHHhC---CCC
Confidence            334466779999999999999999884  89999999876554    33221 1110   1111  11222333   469


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCce-EEEEcc
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS-IVNVSS  142 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~-iv~isS  142 (238)
                      ++|.++|....   ..++..    ..++.|..-...+.+.    +.+..+.+. ++.+|.
T Consensus        79 vVvitaG~p~k---pG~~R~----dLl~~N~~I~~~i~~~----i~~~~p~a~~vlvvsN  127 (343)
T 3fi9_A           79 YIVSSGGAPRK---EGMTRE----DLLKGNAEIAAQLGKD----IKSYCPDCKHVIIIFN  127 (343)
T ss_dssp             EEEECCC----------CHH----HHHHHHHHHHHHHHHH----HHHHCTTCCEEEECSS
T ss_pred             EEEEccCCCCC---CCCCHH----HHHHHHHHHHHHHHHH----HHHhccCcEEEEEecC
Confidence            99999997432   122332    2355666555444444    444443564 666654

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.89  E-value=0.0013  Score=54.44  Aligned_cols=76  Identities=16%  Similarity=0.072  Sum_probs=54.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ...+++|+|+ |++|...+..+...|++|+++++++++.+.+.++++--.+  .|..+.+.+.++   .+.+|++|.++|
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v--i~~~~~~~~~~~---~~g~D~vid~~g  253 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDY--VIGSDQAKMSEL---ADSLDYVIDTVP  253 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCE--EETTCHHHHHHS---TTTEEEEEECCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCcee--eccccHHHHHHh---cCCCCEEEECCC
Confidence            4456788885 9999999998888999999999999888777644432222  355555444332   246999999998


Q ss_pred             CC
Q psy14567         91 VA   92 (238)
Q Consensus        91 ~~   92 (238)
                      ..
T Consensus       254 ~~  255 (357)
T 2cf5_A          254 VH  255 (357)
T ss_dssp             SC
T ss_pred             Ch
Confidence            53

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.88  E-value=0.0022  Score=54.06  Aligned_cols=78  Identities=14%  Similarity=0.051  Sum_probs=55.5

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-C-CccEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-G-PVDVLI   86 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g-~id~li   86 (238)
                      +...+++|+|+ |++|...+..+...|+ +|+++++++++.+.+.+.....   ..|..+.+..+.+.+.. + ++|++|
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~---vi~~~~~~~~~~i~~~t~g~g~D~vi  287 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADH---VIDPTKENFVEAVLDYTNGLGAKLFL  287 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE---EECTTTSCHHHHHHHHTTTCCCSEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE---EEcCCCCCHHHHHHHHhCCCCCCEEE
Confidence            34557788998 8999999998888999 8999999999887776654322   23544433333333333 2 599999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .++|.
T Consensus       288 d~~g~  292 (404)
T 3ip1_A          288 EATGV  292 (404)
T ss_dssp             ECSSC
T ss_pred             ECCCC
Confidence            99985

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.85  E-value=0.002  Score=53.61  Aligned_cols=77  Identities=19%  Similarity=0.092  Sum_probs=53.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCC-HHHHHHHHHhc--CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQD-WARTRAAVSKV--GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~--g~id~li   86 (238)
                      ...+++|+|+ |++|...+..+...|+ +|+++++++++.+.+++.... ..  .|.++ .+++.+.+.+.  +.+|++|
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~-~v--i~~~~~~~~~~~~~~~~~~~g~D~vi  267 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT-DF--VNPNDHSEPISQVLSKMTNGGVDFSL  267 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCC-EE--ECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCc-eE--EeccccchhHHHHHHHHhCCCCCEEE
Confidence            4457788885 9999999998888999 899999999988777654322 12  34442 11222223222  4799999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .++|.
T Consensus       268 d~~g~  272 (374)
T 1cdo_A          268 ECVGN  272 (374)
T ss_dssp             ECSCC
T ss_pred             ECCCC
Confidence            99985

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.84  E-value=0.00073  Score=55.77  Aligned_cols=72  Identities=11%  Similarity=0.065  Sum_probs=52.9

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      .+...+++|.|+ |++|...+..+...|++|+++++++++.+.+.+..... .+    ++.+.+.+      .+|++|.+
T Consensus       174 ~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa~~-v~----~~~~~~~~------~~D~vid~  241 (348)
T 3two_A          174 VTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGVKH-FY----TDPKQCKE------ELDFIIST  241 (348)
T ss_dssp             CCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTCSE-EE----SSGGGCCS------CEEEEEEC
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCe-ec----CCHHHHhc------CCCEEEEC
Confidence            345567788887 99999999999889999999999999888776644332 22    33332221      69999999


Q ss_pred             cCCC
Q psy14567         89 AAVA   92 (238)
Q Consensus        89 ag~~   92 (238)
                      +|..
T Consensus       242 ~g~~  245 (348)
T 3two_A          242 IPTH  245 (348)
T ss_dssp             CCSC
T ss_pred             CCcH
Confidence            9853

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.83  E-value=0.0016  Score=53.59  Aligned_cols=75  Identities=13%  Similarity=0.019  Sum_probs=52.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh--cCCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK--VGPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~--~g~id~li~   87 (238)
                      ...+++|+|+ |++|..++..+...|+ +|+++++++++.+.+.+. .. .  ..|..+++ +.+.+.+  -+++|++|.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~-~--v~~~~~~~-~~~~~~~~~~~g~D~vid  237 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-AD-R--LVNPLEED-LLEVVRRVTGSGVEVLLE  237 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CS-E--EECTTTSC-HHHHHHHHHSSCEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HH-h--ccCcCccC-HHHHHHHhcCCCCCEEEE
Confidence            4567888999 9999999999888999 999999998887655443 21 1  24554322 2222222  236999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      ++|.
T Consensus       238 ~~g~  241 (343)
T 2dq4_A          238 FSGN  241 (343)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            9984

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.83  E-value=0.0013  Score=52.23  Aligned_cols=67  Identities=12%  Similarity=0.127  Sum_probs=50.0

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      .+.++|.|+ ||.|++++..|++.|.+|.+.+|+.++.+++. +.+ +...  +..+   +       ...|++||+...
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~-~~~~--~~~~---l-------~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG-CDCF--MEPP---K-------SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT-CEEE--SSCC---S-------SCCSEEEECCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC-CeEe--cHHH---h-------ccCCEEEEcccC
Confidence            556677775 89999999999999999999999999988887 443 2222  2221   1       157999999865


Q ss_pred             CC
Q psy14567         92 AR   93 (238)
Q Consensus        92 ~~   93 (238)
                      ..
T Consensus       183 Gm  184 (269)
T 3phh_A          183 SL  184 (269)
T ss_dssp             CC
T ss_pred             CC
Confidence            53

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.83  E-value=0.0021  Score=53.48  Aligned_cols=78  Identities=22%  Similarity=0.094  Sum_probs=54.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHH---hc-CCccE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS---KV-GPVDV   84 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~---~~-g~id~   84 (238)
                      +...+++|.|+ |++|...+..+...|+ +|+++++++++.+.+++.....   ..|.++.+..+.+.+   .. +++|+
T Consensus       181 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~---vi~~~~~~~~~~i~~~~~~~~gg~Dv  256 (370)
T 4ej6_A          181 KAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATA---TVDPSAGDVVEAIAGPVGLVPGGVDV  256 (370)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSE---EECTTSSCHHHHHHSTTSSSTTCEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCE---EECCCCcCHHHHHHhhhhccCCCCCE
Confidence            34557788897 8999999998888999 8999999998887666554321   245544433333332   11 47999


Q ss_pred             EEEccCC
Q psy14567         85 LINNAAV   91 (238)
Q Consensus        85 li~~ag~   91 (238)
                      +|.++|.
T Consensus       257 vid~~G~  263 (370)
T 4ej6_A          257 VIECAGV  263 (370)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9999874

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.81  E-value=0.0022  Score=54.20  Aligned_cols=71  Identities=14%  Similarity=0.100  Sum_probs=56.3

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ++|.|. |.+|..+++.|.+.|..|++++++++..+.+.+.  +..++..|.++++.++++  .+.+.|++|.+.+
T Consensus         7 viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~--g~~vi~GDat~~~~L~~a--gi~~A~~viv~~~   77 (413)
T 3l9w_A            7 VIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF--GMKVFYGDATRMDLLESA--GAAKAEVLINAID   77 (413)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT--TCCCEESCTTCHHHHHHT--TTTTCSEEEECCS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC--CCeEEEcCCCCHHHHHhc--CCCccCEEEECCC
Confidence            455565 7799999999999999999999999999888754  466788999998876655  2235677777664

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.77  E-value=0.0013  Score=54.82  Aligned_cols=78  Identities=15%  Similarity=0.078  Sum_probs=54.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCC-HHHHHHHHHhc--CCccEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQD-WARTRAAVSKV--GPVDVL   85 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~--g~id~l   85 (238)
                      +...+++|.|+ |++|...+..+...|+ +|+++++++++++.+.+.....   ..|..+ .+++.+.+.+.  +.+|++
T Consensus       192 ~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~---vi~~~~~~~~~~~~i~~~~~gg~D~v  267 (378)
T 3uko_A          192 EPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNE---FVNPKDHDKPIQEVIVDLTDGGVDYS  267 (378)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCE---EECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcE---EEccccCchhHHHHHHHhcCCCCCEE
Confidence            34567788898 9999999998888999 8999999999987665543222   234432 12233333332  479999


Q ss_pred             EEccCC
Q psy14567         86 INNAAV   91 (238)
Q Consensus        86 i~~ag~   91 (238)
                      |.++|.
T Consensus       268 id~~g~  273 (378)
T 3uko_A          268 FECIGN  273 (378)
T ss_dssp             EECSCC
T ss_pred             EECCCC
Confidence            999984

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.75  E-value=0.0031  Score=51.63  Aligned_cols=113  Identities=13%  Similarity=0.053  Sum_probs=67.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhC------C-CceEEEeecCCHHHHHHHHHhcC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAF------P-NVQTVQVDLQDWARTRAAVSKVG   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~------~-~~~~~~~D~~~~~~v~~~~~~~g   80 (238)
                      .+...+.|+|+ |++|.+++..|+..|.  .+++++++++.++.....+      . ....+..  .|.       +.+.
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~-------~~~~   86 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDY-------SVTA   86 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSG-------GGGT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCH-------HHhC
Confidence            34445667787 8999999999999887  8999999987665432222      1 1112211  122       1234


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccc
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSI  143 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  143 (238)
                      .-|++|.++|....   ..++..+    .++.|..-...+.+.+    .+..+.+.++.+|.-
T Consensus        87 ~aDiVvi~aG~~~k---pG~tR~d----L~~~N~~I~~~i~~~i----~~~~p~a~vlvvtNP  138 (331)
T 4aj2_A           87 NSKLVIITAGARQQ---EGESRLN----LVQRNVNIFKFIIPNV----VKYSPQCKLLIVSNP  138 (331)
T ss_dssp             TEEEEEECCSCCCC---TTCCGGG----GHHHHHHHHHHHHHHH----HHHCTTCEEEECSSS
T ss_pred             CCCEEEEccCCCCC---CCccHHH----HHHHHHHHHHHHHHHH----HHHCCCeEEEEecCh
Confidence            57999999997532   2334433    2445554444444444    443335777777653

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.74  E-value=0.0017  Score=54.05  Aligned_cols=77  Identities=14%  Similarity=0.073  Sum_probs=52.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCC-HHHHHHHHHhc--CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQD-WARTRAAVSKV--GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~--g~id~li   86 (238)
                      ...+++|+|+ |++|...+..+...|+ +|+++++++++.+.+++.... ..  .|..+ .+++.+.+.+.  +.+|++|
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~v--i~~~~~~~~~~~~i~~~t~gg~Dvvi  266 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT-EC--LNPKDYDKPIYEVICEKTNGGVDYAV  266 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCS-EE--ECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc-EE--EecccccchHHHHHHHHhCCCCCEEE
Confidence            4457788885 8999999998888899 899999999988777654332 22  34432 11222233222  4799999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .++|.
T Consensus       267 d~~g~  271 (373)
T 1p0f_A          267 ECAGR  271 (373)
T ss_dssp             ECSCC
T ss_pred             ECCCC
Confidence            99985

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.73  E-value=0.0029  Score=52.68  Aligned_cols=77  Identities=14%  Similarity=0.075  Sum_probs=53.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCC-HHHHHHHHHhc--CCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQD-WARTRAAVSKV--GPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~--g~id~li   86 (238)
                      ...+++|+|+ |++|...+..+...|+ +|+++++++++.+.+++.... ..  .|.++ .+++.+.+.+.  +.+|++|
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~v--i~~~~~~~~~~~~v~~~~~~g~Dvvi  270 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT-DC--LNPRELDKPVQDVITELTAGGVDYSL  270 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCS-EE--ECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCc-EE--EccccccchHHHHHHHHhCCCccEEE
Confidence            4457788885 9999999998888999 899999999988777654332 12  34442 11222222222  4799999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .++|.
T Consensus       271 d~~G~  275 (376)
T 1e3i_A          271 DCAGT  275 (376)
T ss_dssp             ESSCC
T ss_pred             ECCCC
Confidence            99985

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.72  E-value=0.0015  Score=54.22  Aligned_cols=75  Identities=12%  Similarity=0.073  Sum_probs=48.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh----HHHHHhhCCCceEEEeecCC------HHHHHHHHH-hcCC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN----LDSLKQAFPNVQTVQVDLQD------WARTRAAVS-KVGP   81 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~~D~~~------~~~v~~~~~-~~g~   81 (238)
                      .+++|+||+|++|...+..+...|++|++++++.++    .+.+.+.... .++  |..+      .+.+.++.. .-+.
T Consensus       169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~-~vi--~~~~~~~~~~~~~i~~~t~~~~~g  245 (364)
T 1gu7_A          169 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT-QVI--TEDQNNSREFGPTIKEWIKQSGGE  245 (364)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS-EEE--EHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             cEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCe-EEE--ecCccchHHHHHHHHHHhhccCCC
Confidence            678999999999999999888899999888766544    3344333322 222  3221      122333220 1136


Q ss_pred             ccEEEEccC
Q psy14567         82 VDVLINNAA   90 (238)
Q Consensus        82 id~li~~ag   90 (238)
                      +|++|.++|
T Consensus       246 ~Dvvid~~G  254 (364)
T 1gu7_A          246 AKLALNCVG  254 (364)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999997

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.68  E-value=0.0022  Score=53.32  Aligned_cols=78  Identities=14%  Similarity=0.093  Sum_probs=54.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCC-HHHHHHHHHhc--CCccEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQD-WARTRAAVSKV--GPVDVL   85 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~--g~id~l   85 (238)
                      +...+++|+|+ |++|...+..+...|+ +|+++++++++.+.+++..... .  .|.++ .+++.+.+.+.  +.+|++
T Consensus       189 ~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~-v--i~~~~~~~~~~~~v~~~~~~g~D~v  264 (373)
T 2fzw_A          189 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE-C--INPQDFSKPIQEVLIEMTDGGVDYS  264 (373)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSE-E--ECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCce-E--eccccccccHHHHHHHHhCCCCCEE
Confidence            34457788885 9999999998888999 8999999999887776554321 2  34442 12233333322  479999


Q ss_pred             EEccCC
Q psy14567         86 INNAAV   91 (238)
Q Consensus        86 i~~ag~   91 (238)
                      |.++|.
T Consensus       265 id~~g~  270 (373)
T 2fzw_A          265 FECIGN  270 (373)
T ss_dssp             EECSCC
T ss_pred             EECCCc
Confidence            999985

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.67  E-value=0.0024  Score=53.08  Aligned_cols=78  Identities=15%  Similarity=0.085  Sum_probs=53.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~   87 (238)
                      +...+++|+|+ |++|...+..+...|+ +|+++++++++.+.+++..... .  .|..+.+..+++.+.. +++|++|.
T Consensus       189 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-v--i~~~~~~~~~~~~~~~~gg~D~vid  264 (371)
T 1f8f_A          189 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATH-V--INSKTQDPVAAIKEITDGGVNFALE  264 (371)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSE-E--EETTTSCHHHHHHHHTTSCEEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCE-E--ecCCccCHHHHHHHhcCCCCcEEEE
Confidence            34457788885 8999999998888899 7999999999887776554322 2  3444322222222222 36999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      ++|.
T Consensus       265 ~~g~  268 (371)
T 1f8f_A          265 STGS  268 (371)
T ss_dssp             CSCC
T ss_pred             CCCC
Confidence            9984

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.66  E-value=0.0028  Score=53.23  Aligned_cols=78  Identities=14%  Similarity=0.034  Sum_probs=54.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc---CCccEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV---GPVDVL   85 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~---g~id~l   85 (238)
                      +...+++|.|+ |++|...+..+...|+ +|+++++++++++.+++...  .  ..|.++.+.+.+.+.+.   ..+|++
T Consensus       184 ~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa--~--~i~~~~~~~~~~~v~~~t~g~g~Dvv  258 (398)
T 1kol_A          184 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF--E--IADLSLDTPLHEQIAALLGEPEVDCA  258 (398)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC--E--EEETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCC--c--EEccCCcchHHHHHHHHhCCCCCCEE
Confidence            34456778885 9999999998888999 79999999998877765432  3  24555433222222222   259999


Q ss_pred             EEccCCC
Q psy14567         86 INNAAVA   92 (238)
Q Consensus        86 i~~ag~~   92 (238)
                      |.++|..
T Consensus       259 id~~G~~  265 (398)
T 1kol_A          259 VDAVGFE  265 (398)
T ss_dssp             EECCCTT
T ss_pred             EECCCCc
Confidence            9999854

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.64  E-value=0.00084  Score=52.94  Aligned_cols=67  Identities=18%  Similarity=0.145  Sum_probs=49.0

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      .++|.|+ ||.|++++..|++.|+ +|.+.+|+.++.+++.++++   .  .+.   +++.+.++   ..|++|++....
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~---~--~~~---~~~~~~~~---~aDiVInatp~g  177 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVK---I--FSL---DQLDEVVK---KAKSLFNTTSVG  177 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCE---E--EEG---GGHHHHHH---TCSEEEECSSTT
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcc---c--CCH---HHHHhhhc---CCCEEEECCCCC
Confidence            5566675 8999999999999998 89999999998877765442   1  122   23344444   469999988543

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.58  E-value=0.0016  Score=49.52  Aligned_cols=41  Identities=10%  Similarity=0.046  Sum_probs=35.8

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA   55 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (238)
                      ++|+||+|.+|.++++.|++.|++|.+.+|++++.+.+.+.
T Consensus         3 i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             EEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            56779999999999999999999999999999887776543

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.56  E-value=0.0032  Score=51.93  Aligned_cols=78  Identities=13%  Similarity=-0.006  Sum_probs=55.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-C-CccEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-G-PVDVLI   86 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g-~id~li   86 (238)
                      +...+++|.|+ |++|...+..+...|+ +|+++++++++.+.+.+.....   ..|..+.+..+++.+.. + ++|++|
T Consensus       165 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~---vi~~~~~~~~~~v~~~t~g~g~D~v~  240 (352)
T 3fpc_A          165 KLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATD---IINYKNGDIVEQILKATDGKGVDKVV  240 (352)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCE---EECGGGSCHHHHHHHHTTTCCEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCce---EEcCCCcCHHHHHHHHcCCCCCCEEE
Confidence            44567788885 8999999998888999 8999999998887776654322   24444433333333333 2 599999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .++|.
T Consensus       241 d~~g~  245 (352)
T 3fpc_A          241 IAGGD  245 (352)
T ss_dssp             ECSSC
T ss_pred             ECCCC
Confidence            99885

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.53  E-value=0.0028  Score=53.23  Aligned_cols=78  Identities=17%  Similarity=0.131  Sum_probs=53.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHH-HHHHHHhc-C-CccEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWAR-TRAAVSKV-G-PVDVL   85 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~-g-~id~l   85 (238)
                      +...+++|.|+ |++|...+..+...|+ +|+++++++++++.+.+..  ..  ..|..+.+. .+.+.+.. + .+|++
T Consensus       184 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG--a~--~i~~~~~~~~~~~~~~~~~g~g~Dvv  258 (398)
T 2dph_A          184 KPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAG--FE--TIDLRNSAPLRDQIDQILGKPEVDCG  258 (398)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTT--CE--EEETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcC--Cc--EEcCCCcchHHHHHHHHhCCCCCCEE
Confidence            34556788896 9999999988888899 9999999999887776443  23  345544322 22222212 2 59999


Q ss_pred             EEccCCC
Q psy14567         86 INNAAVA   92 (238)
Q Consensus        86 i~~ag~~   92 (238)
                      |.++|..
T Consensus       259 id~~g~~  265 (398)
T 2dph_A          259 VDAVGFE  265 (398)
T ss_dssp             EECSCTT
T ss_pred             EECCCCc
Confidence            9999854

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.53  E-value=0.0047  Score=50.22  Aligned_cols=75  Identities=16%  Similarity=0.139  Sum_probs=52.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +...+++|+||+|++|...+..+...|++|+++++. ++.+.+++.... .  ..|..+.+.   +.+.+..+|++|.++
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~~~~~~~lGa~-~--~i~~~~~~~---~~~~~~g~D~v~d~~  223 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RNHAFLKALGAE-Q--CINYHEEDF---LLAISTPVDAVIDLV  223 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HHHHHHHHHTCS-E--EEETTTSCH---HHHCCSCEEEEEESS
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-chHHHHHHcCCC-E--EEeCCCcch---hhhhccCCCEEEECC
Confidence            455678899999999999999999999999988754 445545444322 2  235544332   233446799999998


Q ss_pred             CC
Q psy14567         90 AV   91 (238)
Q Consensus        90 g~   91 (238)
                      |.
T Consensus       224 g~  225 (321)
T 3tqh_A          224 GG  225 (321)
T ss_dssp             CH
T ss_pred             Cc
Confidence            83

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.52  E-value=0.02  Score=46.75  Aligned_cols=108  Identities=10%  Similarity=0.066  Sum_probs=65.6

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHH----HHhhCC----CceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDS----LKQAFP----NVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~----~~~~~~----~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      .+.|+|+ |.+|.+++..|+..|.  .|+++++++++++.    +.+..+    ++.....|   .       +.+..-|
T Consensus         7 kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-------~a~~~aD   75 (326)
T 3pqe_A            7 KVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-------EDCKDAD   75 (326)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-------GGGTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-------HHhCCCC
Confidence            3556685 9999999999999886  89999999887654    433221    23332222   1       2233579


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccc
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSI  143 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  143 (238)
                      ++|.++|.... +  .++..+    .++.|..-...+.+.    +.+..+.+.++.+|.-
T Consensus        76 vVvi~ag~p~k-p--G~~R~d----L~~~N~~Iv~~i~~~----I~~~~p~a~vlvvtNP  124 (326)
T 3pqe_A           76 IVCICAGANQK-P--GETRLE----LVEKNLKIFKGIVSE----VMASGFDGIFLVATNP  124 (326)
T ss_dssp             EEEECCSCCCC-T--TCCHHH----HHHHHHHHHHHHHHH----HHHTTCCSEEEECSSS
T ss_pred             EEEEecccCCC-C--CccHHH----HHHHHHHHHHHHHHH----HHHhcCCeEEEEcCCh
Confidence            99999996432 1  233333    345565554444444    4444435677777653

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.52  E-value=0.0056  Score=50.31  Aligned_cols=77  Identities=13%  Similarity=0.054  Sum_probs=52.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLI   86 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li   86 (238)
                      +...+++|.|+ |++|...+..+... |++|+++++++++.+.+++..... .+  |..+ +..+++.+..  ..+|++|
T Consensus       170 ~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~-~i--~~~~-~~~~~v~~~t~g~g~d~v~  244 (345)
T 3jv7_A          170 GPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADA-AV--KSGA-GAADAIRELTGGQGATAVF  244 (345)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSE-EE--ECST-THHHHHHHHHGGGCEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCE-EE--cCCC-cHHHHHHHHhCCCCCeEEE
Confidence            44567788887 99999988877666 779999999999988776654332 22  3322 2222222222  2699999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .++|.
T Consensus       245 d~~G~  249 (345)
T 3jv7_A          245 DFVGA  249 (345)
T ss_dssp             ESSCC
T ss_pred             ECCCC
Confidence            99984

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=96.41  E-value=0.0025  Score=51.60  Aligned_cols=25  Identities=12%  Similarity=0.054  Sum_probs=22.3

Q ss_pred             CchHHHHHHHHhhCCCEEEEecCCh
Q psy14567         22 PGIGRCIVEKLSQHEAIIIALSKTQ   46 (238)
Q Consensus        22 ~gIG~~ia~~l~~~G~~V~~~~r~~   46 (238)
                      |..|.++|++++++|+.|+++.+..
T Consensus        65 GkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             cHHHHHHHHHHHHCCCEEEEEecCC
Confidence            5599999999999999999988754

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.40  E-value=0.00096  Score=55.25  Aligned_cols=78  Identities=8%  Similarity=0.160  Sum_probs=46.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH----hHHHHHhhCCCceEEEeecCCH--HHHHHHHHhcCCcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA----NLDSLKQAFPNVQTVQVDLQDW--ARTRAAVSKVGPVD   83 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~g~id   83 (238)
                      +...+++|.||+|++|...+..+...|++++++.++.+    +.+.+ ++++--.++  |..+.  +.+.++.+..+++|
T Consensus       166 ~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~-~~lGa~~vi--~~~~~~~~~~~~~~~~~~~~D  242 (357)
T 1zsy_A          166 QPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRL-KSLGAEHVI--TEEELRRPEMKNFFKDMPQPR  242 (357)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHH-HHTTCSEEE--EHHHHHSGGGGGTTSSSCCCS
T ss_pred             CCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHH-HhcCCcEEE--ecCcchHHHHHHHHhCCCCce
Confidence            34567899999999999999888888998877765432    23333 344322222  32211  11111111112589


Q ss_pred             EEEEccC
Q psy14567         84 VLINNAA   90 (238)
Q Consensus        84 ~li~~ag   90 (238)
                      ++|.++|
T Consensus       243 vvid~~g  249 (357)
T 1zsy_A          243 LALNCVG  249 (357)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999887

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=96.40  E-value=0.0068  Score=49.58  Aligned_cols=117  Identities=8%  Similarity=0.079  Sum_probs=66.1

Q ss_pred             eeeCCCCcCCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhC-------CCceEEEeecCCHHHHHHH
Q psy14567          5 AKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAA   75 (238)
Q Consensus         5 ~~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~   75 (238)
                      ++...++...+.|+|+ |.+|.+++..|+..+.  .++++++++++++.....+       .++.+.. |  +.+     
T Consensus         2 ~~~~~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~-----   72 (326)
T 2zqz_A            2 ASITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYS-----   72 (326)
T ss_dssp             ----CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG-----
T ss_pred             CccccCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHH-----
Confidence            4455555555677798 9999999999988775  8999999987765533222       1222221 1  211     


Q ss_pred             HHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccc
Q psy14567         76 VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSI  143 (238)
Q Consensus        76 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  143 (238)
                        .+..-|++|..+|.....   .++..+    .+..|..-.    +...+.+.+..+.+.++++|--
T Consensus        73 --a~~~aDvVii~ag~~~k~---g~~R~d----l~~~n~~i~----~~i~~~i~~~~p~a~iiv~tNP  127 (326)
T 2zqz_A           73 --DAKDADLVVITAGAPQKP---GETRLD----LVNKNLKIL----KSIVDPIVDSGFNGIFLVAANP  127 (326)
T ss_dssp             --GGGGCSEEEECCCCC--------CHHH----HHHHHHHHH----HHHHHHHHHHTCCSEEEECSSS
T ss_pred             --HhCCCCEEEEcCCCCCCC---CCCHHH----HHHHHHHHH----HHHHHHHHHHCCCeEEEEeCCc
Confidence              123469999999875321   223222    234454444    4444444444446778877543

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.38  E-value=0.0028  Score=52.41  Aligned_cols=71  Identities=8%  Similarity=0.018  Sum_probs=50.5

Q ss_pred             CCCCCCCCCCchHHHH-HHHH-hhCCCE-EEEecCChH---hHHHHHhhCCCceEEEeecCCHHH--HHHHHHhcCCccE
Q psy14567         13 NTKGGDYPKPGIGRCI-VEKL-SQHEAI-IIALSKTQA---NLDSLKQAFPNVQTVQVDLQDWAR--TRAAVSKVGPVDV   84 (238)
Q Consensus        13 ~v~~itG~s~gIG~~i-a~~l-~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~D~~~~~~--v~~~~~~~g~id~   84 (238)
                      .+++|+|+ |++|... +..+ ...|++ |++++++++   +.+.+.+..  ...+  |..+++-  +.++   -+.+|+
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lG--a~~v--~~~~~~~~~i~~~---~gg~Dv  245 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELD--ATYV--DSRQTPVEDVPDV---YEQMDF  245 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTT--CEEE--ETTTSCGGGHHHH---SCCEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcC--Cccc--CCCccCHHHHHHh---CCCCCE
Confidence            57888999 9999999 8877 678997 999999888   777665433  2333  5543221  3333   246999


Q ss_pred             EEEccCC
Q psy14567         85 LINNAAV   91 (238)
Q Consensus        85 li~~ag~   91 (238)
                      +|.++|.
T Consensus       246 vid~~g~  252 (357)
T 2b5w_A          246 IYEATGF  252 (357)
T ss_dssp             EEECSCC
T ss_pred             EEECCCC
Confidence            9999983

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.27  E-value=0.014  Score=49.17  Aligned_cols=43  Identities=9%  Similarity=-0.040  Sum_probs=36.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA   55 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (238)
                      ..+++|.|+ |.+|+.+++.+...|++|++++|+.++++.+.+.
T Consensus       172 g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~~l  214 (401)
T 1x13_A          172 PAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSM  214 (401)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc
Confidence            445677775 8999999999999999999999999988777543

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.26  E-value=0.0026  Score=50.76  Aligned_cols=70  Identities=19%  Similarity=0.287  Sum_probs=50.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      .+.++|.|+ |++|+++++.|.+.|++|.+.+|+.++.+++.+..+ +     ++.+  ++.+.++   ..|++|++.+.
T Consensus       129 ~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g-~-----~~~~--~~~~~~~---~aDiVi~atp~  196 (275)
T 2hk9_A          129 EKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFP-L-----EVVN--SPEEVID---KVQVIVNTTSV  196 (275)
T ss_dssp             GSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSC-E-----EECS--CGGGTGG---GCSEEEECSST
T ss_pred             CCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcC-C-----eeeh--hHHhhhc---CCCEEEEeCCC
Confidence            345666674 799999999999999999999999998888876553 2     2221  1122223   47999999976


Q ss_pred             CC
Q psy14567         92 AR   93 (238)
Q Consensus        92 ~~   93 (238)
                      ..
T Consensus       197 ~~  198 (275)
T 2hk9_A          197 GL  198 (275)
T ss_dssp             TS
T ss_pred             CC
Confidence            53

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.22  E-value=0.014  Score=47.90  Aligned_cols=81  Identities=12%  Similarity=-0.002  Sum_probs=54.4

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCE-EEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAI-IIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      .+...+++|.|+ |++|...+..+...|+. ++++++++++++.+++.... ..+..+-.+..+..+.+...+..|+++.
T Consensus       158 ~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~-~~i~~~~~~~~~~~~~~~~~~g~d~v~d  235 (346)
T 4a2c_A          158 GCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAM-QTFNSSEMSAPQMQSVLRELRFNQLILE  235 (346)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS-EEEETTTSCHHHHHHHHGGGCSSEEEEE
T ss_pred             cCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCe-EEEeCCCCCHHHHHHhhcccCCcccccc
Confidence            345566788876 89999999988889985 57788898887766654433 3332222334444444444566899999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      ++|.
T Consensus       236 ~~G~  239 (346)
T 4a2c_A          236 TAGV  239 (346)
T ss_dssp             CSCS
T ss_pred             cccc
Confidence            8874

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.20  E-value=0.012  Score=47.16  Aligned_cols=69  Identities=14%  Similarity=0.324  Sum_probs=44.6

Q ss_pred             CCchHHHHHHHHhhCCC-EEEEecCCh------------------Hh----HHHHHhhCCCc--eEEEeecCCHHHHHHH
Q psy14567         21 KPGIGRCIVEKLSQHEA-IIIALSKTQ------------------AN----LDSLKQAFPNV--QTVQVDLQDWARTRAA   75 (238)
Q Consensus        21 s~gIG~~ia~~l~~~G~-~V~~~~r~~------------------~~----~~~~~~~~~~~--~~~~~D~~~~~~v~~~   75 (238)
                      .||+|.++++.|+..|. ++.++++..                  .+    .+.+.+..+.+  ..+..++++.+.++++
T Consensus        44 aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~  123 (292)
T 3h8v_A           44 VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNITTVENFQHF  123 (292)
T ss_dssp             CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTTSHHHHHHH
T ss_pred             cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCCcHHHHHHH
Confidence            37899999999999997 888888654                  12    22344444553  3444566665666666


Q ss_pred             HHhc--------CCccEEEEcc
Q psy14567         76 VSKV--------GPVDVLINNA   89 (238)
Q Consensus        76 ~~~~--------g~id~li~~a   89 (238)
                      ++.+        ...|+||.+.
T Consensus       124 ~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          124 MDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             HHHHHHBSSSTTBCCSEEEECC
T ss_pred             hhhhcccccccCCCCCEEEECC
Confidence            5422        3578887655

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.16  E-value=0.0071  Score=47.34  Aligned_cols=75  Identities=13%  Similarity=0.165  Sum_probs=53.6

Q ss_pred             CCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEccCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNAAV   91 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~ag~   91 (238)
                      ++|.|++|.+|+.+++.+.+. +..++......++++++...  ... +..|++.++.+.+.+...  .++++|+-+.|.
T Consensus         3 V~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~--~~D-vvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~   79 (245)
T 1p9l_A            3 VGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDG--NTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF   79 (245)
T ss_dssp             EEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHT--TCC-EEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhcc--CCc-EEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence            466799999999999999865 88887665544555555432  233 568999998887766543  358888888874


Q ss_pred             C
Q psy14567         92 A   92 (238)
Q Consensus        92 ~   92 (238)
                      .
T Consensus        80 ~   80 (245)
T 1p9l_A           80 T   80 (245)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.11  E-value=0.011  Score=49.27  Aligned_cols=77  Identities=10%  Similarity=0.023  Sum_probs=51.3

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeec------------CCH---HHHHHHHH
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDL------------QDW---ARTRAAVS   77 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~------------~~~---~~v~~~~~   77 (238)
                      ..++|.|+ |.+|..+++.+...|++|++++|+.++++.+.+..  ..++..|+            +++   .....+.+
T Consensus       185 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~lG--a~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          185 ASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSVG--AQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHTT--CEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC--CeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            44566666 78999999999999999999999999988887642  23332221            110   11122223


Q ss_pred             hcCCccEEEEccCCC
Q psy14567         78 KVGPVDVLINNAAVA   92 (238)
Q Consensus        78 ~~g~id~li~~ag~~   92 (238)
                      .+..-|++|.++.+.
T Consensus       262 ~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          262 AITKFDIVITTALVP  276 (381)
T ss_dssp             HHTTCSEEEECCCCT
T ss_pred             HHhcCCEEEECCCCC
Confidence            345789999987554

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.09  E-value=0.0058  Score=49.32  Aligned_cols=70  Identities=13%  Similarity=0.117  Sum_probs=49.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.++++|.|+ |+||+++++.|...|++|++.+|+.++.+.+.+.  ....+  +.   +++.++++   .-|++|++..
T Consensus       156 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~--g~~~~--~~---~~l~~~l~---~aDvVi~~~p  224 (300)
T 2rir_A          156 HGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEM--GLVPF--HT---DELKEHVK---DIDICINTIP  224 (300)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--TCEEE--EG---GGHHHHST---TCSEEEECCS
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC--CCeEE--ch---hhHHHHhh---CCCEEEECCC
Confidence            4556777775 8999999999999999999999999877665442  22222  22   23344443   5799999887


Q ss_pred             C
Q psy14567         91 V   91 (238)
Q Consensus        91 ~   91 (238)
                      .
T Consensus       225 ~  225 (300)
T 2rir_A          225 S  225 (300)
T ss_dssp             S
T ss_pred             h
Confidence            4

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.03  E-value=0.021  Score=48.96  Aligned_cols=72  Identities=15%  Similarity=0.116  Sum_probs=57.4

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ++|.|+ |.+|.++|+.|.++|+.|++++++++.++.+.+.+ ++..+..|.++++-++++  .+.+-|.+|...+
T Consensus         6 iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-~~~~i~Gd~~~~~~L~~A--gi~~ad~~ia~t~   77 (461)
T 4g65_A            6 IIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-DLRVVNGHASHPDVLHEA--GAQDADMLVAVTN   77 (461)
T ss_dssp             EEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-SCEEEESCTTCHHHHHHH--TTTTCSEEEECCS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-CcEEEEEcCCCHHHHHhc--CCCcCCEEEEEcC
Confidence            344454 67999999999999999999999999999988776 577899999999877665  1224677776553

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.99  E-value=0.0076  Score=48.46  Aligned_cols=69  Identities=13%  Similarity=0.154  Sum_probs=48.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.++++|.| .|+||+++++.|...|++|++.+|+.++.+.+.+.  +...  .+.   +++.++++   ..|++++++.
T Consensus       154 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~--g~~~--~~~---~~l~~~l~---~aDvVi~~~p  222 (293)
T 3d4o_A          154 HGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEM--GMEP--FHI---SKAAQELR---DVDVCINTIP  222 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--TSEE--EEG---GGHHHHTT---TCSEEEECCS
T ss_pred             CCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC--CCee--cCh---hhHHHHhc---CCCEEEECCC
Confidence            455677777 48999999999999999999999998876655432  2222  222   23334443   5799999885

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.95  E-value=0.018  Score=47.14  Aligned_cols=77  Identities=19%  Similarity=0.114  Sum_probs=49.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcC--CccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVG--PVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g--~id~li~   87 (238)
                      ...+++|.|+ |++|...+..++.. |++|+++++++++++...+..... .  .|.++.+..+++.+..+  .+|.++.
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~-~--i~~~~~~~~~~v~~~t~g~g~d~~~~  238 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADV-T--INSGDVNPVDEIKKITGGLGVQSAIV  238 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSE-E--EEC-CCCHHHHHHHHTTSSCEEEEEE
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeE-E--EeCCCCCHHHHhhhhcCCCCceEEEE
Confidence            3456777776 77888777777655 779999999999887666554433 2  34444433344433332  4788888


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      ++|.
T Consensus       239 ~~~~  242 (348)
T 4eez_A          239 CAVA  242 (348)
T ss_dssp             CCSC
T ss_pred             eccC
Confidence            7764

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.92  E-value=0.0083  Score=49.10  Aligned_cols=70  Identities=10%  Similarity=-0.048  Sum_probs=55.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      -++|.|+ |.+|..+++.|.+.|. |++++++++..+ +.+  .+..++..|.++++.++++  .+.+.|.+|...+
T Consensus       117 ~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~--~~~~~i~gd~~~~~~L~~a--~i~~a~~vi~~~~  186 (336)
T 1lnq_A          117 HVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR--SGANFVHGDPTRVSDLEKA--NVRGARAVIVDLE  186 (336)
T ss_dssp             EEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH--TTCEEEESCTTSHHHHHHT--CSTTEEEEEECCS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh--CCcEEEEeCCCCHHHHHhc--ChhhccEEEEcCC
Confidence            3566675 8899999999999999 999999999887 654  4688999999999877665  2235688877653

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=95.91  E-value=0.0052  Score=48.25  Aligned_cols=71  Identities=17%  Similarity=0.146  Sum_probs=47.3

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-EEEEecCCh-------------------HhHHH----HHhhCCCce--EEEeecCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQ-------------------ANLDS----LKQAFPNVQ--TVQVDLQD   68 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~-------------------~~~~~----~~~~~~~~~--~~~~D~~~   68 (238)
                      ++|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.    +.+..+.+.  .+..+++ 
T Consensus        34 VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~-  111 (249)
T 1jw9_B           34 VLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALLD-  111 (249)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC-
T ss_pred             EEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccCC-
Confidence            444553 7999999999999997 899998876                   44443    333345543  3444454 


Q ss_pred             HHHHHHHHHhcCCccEEEEccC
Q psy14567         69 WARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        69 ~~~v~~~~~~~g~id~li~~ag   90 (238)
                      ++.+.++++   ..|++|.+..
T Consensus       112 ~~~~~~~~~---~~DvVi~~~d  130 (249)
T 1jw9_B          112 DAELAALIA---EHDLVLDCTD  130 (249)
T ss_dssp             HHHHHHHHH---TSSEEEECCS
T ss_pred             HhHHHHHHh---CCCEEEEeCC
Confidence            345555655   5799998864

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=95.91  E-value=0.0049  Score=47.21  Aligned_cols=66  Identities=14%  Similarity=0.077  Sum_probs=47.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +...++|.| +|.+|.++++.|++.|.+|++.+|+.++.+.+.+.  ++...     +   ..+.+   ...|++|.+..
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~--g~~~~-----~---~~~~~---~~~DvVi~av~   92 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS--AAQVT-----F---QEEAV---SSPEVIFVAVF   92 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT--TSEEE-----E---HHHHT---TSCSEEEECSC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--CCcee-----c---HHHHH---hCCCEEEECCC
Confidence            445677777 78999999999999999999999999888777543  23221     2   22233   35799998875

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.85  E-value=0.02  Score=48.02  Aligned_cols=75  Identities=12%  Similarity=0.044  Sum_probs=51.4

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEee----------------cCCH------H
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVD----------------LQDW------A   70 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D----------------~~~~------~   70 (238)
                      ..++|.|+ |.+|..+++.+...|++|++++++.++++.+.+..  ..++..+                ++++      +
T Consensus       191 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~G--~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          191 AKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASLG--AKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHTT--CEECCCCC-----------------CHHHHHHHH
T ss_pred             CEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcC--CceeecccccccccccccchhhhcchhhhhhhHh
Confidence            44556666 78999999999999999999999999888877643  2232222                2332      2


Q ss_pred             HHHHHHHhcCCccEEEEccCCCC
Q psy14567         71 RTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        71 ~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      .+.+.++   .-|++|.++.+..
T Consensus       268 ~l~e~l~---~aDVVI~tvlipg  287 (405)
T 4dio_A          268 LVAEHIA---KQDIVITTALIPG  287 (405)
T ss_dssp             HHHHHHH---TCSEEEECCCCSS
T ss_pred             HHHHHhc---CCCEEEECCcCCC
Confidence            3333443   5799999986553

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=95.80  E-value=0.017  Score=47.00  Aligned_cols=108  Identities=15%  Similarity=0.169  Sum_probs=62.8

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC-EEEEecCC--hHhHHHHHhhC--------CCceEEEeecCCHHHHHHHHHhcCCc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKT--QANLDSLKQAF--------PNVQTVQVDLQDWARTRAAVSKVGPV   82 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~--~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~g~i   82 (238)
                      .+.|.|+ |.+|.+++..|+..|. .|++.+++  ++..+......        ....+...  ++.       +.+..-
T Consensus        10 kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~-------~a~~~a   79 (315)
T 3tl2_A           10 KVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDY-------ADTADS   79 (315)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCG-------GGGTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCH-------HHhCCC
Confidence            3556686 9999999999999998 99999999  44433221111        01111111  111       233467


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      |++|.++|.....   .++..+    .++.|..-.-.+.+.+    .+..+.+.++.+|.
T Consensus        80 DvVIiaag~p~kp---g~~R~d----l~~~N~~i~~~i~~~i----~~~~p~a~vlvvsN  128 (315)
T 3tl2_A           80 DVVVITAGIARKP---GMSRDD----LVATNSKIMKSITRDI----AKHSPNAIIVVLTN  128 (315)
T ss_dssp             SEEEECCSCCCCT---TCCHHH----HHHHHHHHHHHHHHHH----HHHCTTCEEEECCS
T ss_pred             CEEEEeCCCCCCC---CCCHHH----HHHHHHHHHHHHHHHH----HHhCCCeEEEECCC
Confidence            9999999975321   233333    3455655554444444    44333567777764

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=95.78  E-value=0.028  Score=45.18  Aligned_cols=107  Identities=14%  Similarity=0.121  Sum_probs=64.1

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHH----HHhh---CC-CceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDS----LKQA---FP-NVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~----~~~~---~~-~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      +.|.|+ |.+|.+++..|+..|.  +|++.+++++.++.    +.+.   ++ ...+...  +|.+    .   +..-|+
T Consensus         3 I~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~----a---~~~aDi   72 (294)
T 1oju_A            3 LGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----L---LKGSEI   72 (294)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGG----G---GTTCSE
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHH----H---hCCCCE
Confidence            345688 9999999999999887  89999999987642    2221   11 1222211  1221    2   234699


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      +|.++|....   ..++..+    .++.|..    +++...+.+.+..+.+.++.+|.
T Consensus        73 VViaag~~~k---pG~~R~d----l~~~N~~----i~~~i~~~i~~~~p~a~iivvsN  119 (294)
T 1oju_A           73 IVVTAGLARK---PGMTRLD----LAHKNAG----IIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EEECCCCCCC---SSCCHHH----HHHHHHH----HHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEECCCCCCC---CCCcHHH----HHHHHHH----HHHHHHHHHHhhCCCeEEEEeCC
Confidence            9999997532   1233333    2444543    44555555555554677777764

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.75  E-value=0.019  Score=49.23  Aligned_cols=75  Identities=15%  Similarity=0.119  Sum_probs=58.4

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      .+.+.|.|| |.||..+|+.|- .+++|.++.+++++.+.+.+++++..++..|.+|++-+++.  .+..-|++|...+
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L~-~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee--~i~~~D~~ia~T~  309 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRLE-QTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEE--NIDQVDVFIALTN  309 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHT-TTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHT--TGGGCSEEEECCS
T ss_pred             ccEEEEEcc-hHHHHHHHHHhh-hcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhc--CchhhcEEEEccc
Confidence            344555454 669999999984 56899999999999999999999999999999998865443  1234688876654

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=95.73  E-value=0.017  Score=48.32  Aligned_cols=43  Identities=9%  Similarity=-0.052  Sum_probs=36.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ   54 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   54 (238)
                      ...+++|.|+ |++|+.+++.+...|++|++++|+.++.+.+.+
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~  213 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES  213 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            3456677775 899999999999999999999999888777765

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=95.73  E-value=0.01  Score=48.43  Aligned_cols=109  Identities=12%  Similarity=0.182  Sum_probs=62.1

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHH----HHhhC----CCceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDS----LKQAF----PNVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~----~~~~~----~~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      .+.|.|+ |.+|.+++..|+..|. +|++.++++++++.    +.+..    ....+...  +|.       +.+..-|+
T Consensus         9 kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~-------~a~~~aDi   78 (324)
T 3gvi_A            9 KIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDY-------AAIEGADV   78 (324)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSG-------GGGTTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCH-------HHHCCCCE
Confidence            3556687 9999999999999998 99999999876542    22211    11222211  121       22335799


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccc
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSI  143 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  143 (238)
                      +|.++|.....   .++..+    .++.|..-.    +...+.+.+..+.+.++.+|.-
T Consensus        79 VIiaag~p~k~---G~~R~d----l~~~N~~i~----~~i~~~i~~~~p~a~iivvtNP  126 (324)
T 3gvi_A           79 VIVTAGVPRKP---GMSRDD----LLGINLKVM----EQVGAGIKKYAPEAFVICITNP  126 (324)
T ss_dssp             EEECCSCCCC--------CH----HHHHHHHHH----HHHHHHHHHHCTTCEEEECCSS
T ss_pred             EEEccCcCCCC---CCCHHH----HHHhhHHHH----HHHHHHHHHHCCCeEEEecCCC
Confidence            99999875321   222222    234454444    4444444444435677777653

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=95.64  E-value=0.11  Score=41.14  Aligned_cols=161  Identities=15%  Similarity=0.159  Sum_probs=86.6

Q ss_pred             CCCCCCCCCchHHHHHHHHhh-CCCEEE-EecCChHhH-------------------HHHHhhCCCceEEEeecCCHHHH
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQ-HEAIII-ALSKTQANL-------------------DSLKQAFPNVQTVQVDLQDWART   72 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~-~G~~V~-~~~r~~~~~-------------------~~~~~~~~~~~~~~~D~~~~~~v   72 (238)
                      .++|+|++|.+|+.+++.+.+ .|.+++ +++++.+..                   +++.+.+.... +..|++.++..
T Consensus         7 kV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~~D-vVIDft~p~~~   85 (273)
T 1dih_A            7 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEGT   85 (273)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcCCC-EEEEcCChHHH
Confidence            466789999999999999875 567776 455554220                   01111112333 34789998887


Q ss_pred             HHHHHhc--CCccEEEEccCCCCCCCCCCCChHHHHHHH-------HHHH----HHHHHHHHHHHHHHHHhccCCceEEE
Q psy14567         73 RAAVSKV--GPVDVLINNAAVARFDRFLDIDEENLIDSI-------FDVN----IKAVINISQVVSKTMIDHKIQGSIVN  139 (238)
Q Consensus        73 ~~~~~~~--g~id~li~~ag~~~~~~~~~~~~~~~~~~~-------~~~n----~~~~~~~~~~~~~~~~~~~~~g~iv~  139 (238)
                      .+.+...  .++++++-+.|....      ..+. +...       +..|    +.-.+.+.+.+.+++..   .-.|=.
T Consensus        86 ~~~~~~a~~~G~~vVigTtG~~~e------~~~~-L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~~---~~diei  155 (273)
T 1dih_A           86 LNHLAFCRQHGKGMVIGTTGFDEA------GKQA-IRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGD---YTDIEI  155 (273)
T ss_dssp             HHHHHHHHHTTCEEEECCCCCCHH------HHHH-HHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHTT---TSEEEE
T ss_pred             HHHHHHHHhCCCCEEEECCCCCHH------HHHH-HHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcCC---CCCEEE
Confidence            6666543  346788767764311      0111 1110       0111    11234455555555531   112211


Q ss_pred             EccccccccCCCCchhhHHHHHHHHHHHHHHHHh---------------CCCCeEEEEEeCCce
Q psy14567        140 VSSIAGKTALEGHTIYSASKAALDSITRTMALEL---------------GPYNIRVNSVQPTVV  188 (238)
Q Consensus       140 isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~---------------~~~~i~v~~i~PG~v  188 (238)
                      +   ..+...+-..+|+.++...+.+.+.+...+               .+.+|.+.++.-|-+
T Consensus       156 i---E~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~v  216 (273)
T 1dih_A          156 I---EAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDI  216 (273)
T ss_dssp             E---EEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTC
T ss_pred             E---EeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCC
Confidence            1   224444555788999988888776554322               135688887774443

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.56  E-value=0.061  Score=43.59  Aligned_cols=110  Identities=21%  Similarity=0.180  Sum_probs=62.6

Q ss_pred             CCCCCCCCchHHHHHHHHhhC-C--CEEEEecCChH---hHHHHHhhCCCceEEEe-ecCCHHHHHHHHHhcCCccEEEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQH-E--AIIIALSKTQA---NLDSLKQAFPNVQTVQV-DLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~-G--~~V~~~~r~~~---~~~~~~~~~~~~~~~~~-D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      +.|+||+|.+|.+++..|+.. +  .+++++++++.   ...++............ .-.+.+    .+   ..-|++|.
T Consensus         3 V~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~~~~v~~~~~~~~~~----~~---~~aDivii   75 (312)
T 3hhp_A            3 VAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATP----AL---EGADVVLI   75 (312)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCSSEEEEEECSSCCHH----HH---TTCSEEEE
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCCCceEEEecCCCcHH----Hh---CCCCEEEE
Confidence            456799999999999999875 4  48999998861   12233322111122111 001222    22   24799999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      +||....   ..++..+    .++.|..-...+.+...+    ..+.+.++.+|.
T Consensus        76 ~ag~~rk---pG~~R~d----ll~~N~~I~~~i~~~i~~----~~p~a~vlvvtN  119 (312)
T 3hhp_A           76 SAGVARK---PGMDRSD----LFNVNAGIVKNLVQQVAK----TCPKACIGIITN  119 (312)
T ss_dssp             CCSCSCC---TTCCHHH----HHHHHHHHHHHHHHHHHH----HCTTSEEEECSS
T ss_pred             eCCCCCC---CCCCHHH----HHHHHHHHHHHHHHHHHH----HCCCcEEEEecC
Confidence            9997532   1344433    355666555555555443    333567777764

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=95.53  E-value=0.088  Score=42.97  Aligned_cols=111  Identities=8%  Similarity=0.037  Sum_probs=64.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHH----HhhC--C-CceEE-EeecCCHHHHHHHHHhcC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSL----KQAF--P-NVQTV-QVDLQDWARTRAAVSKVG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~----~~~~--~-~~~~~-~~D~~~~~~v~~~~~~~g   80 (238)
                      +...+.|+|+ |.+|.+++..|+..|.  .|++++++++.++..    .+..  . ..... ..|..          .+.
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~----------~~~   88 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYS----------VSA   88 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSC----------SCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHH----------HhC
Confidence            3345667788 9999999999999886  899999998765543    2211  1 11222 11221          133


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccc
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSI  143 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  143 (238)
                      .-|++|.++|.....   .++..+    .+..|..-.    +...+.+.+..+.+.++.+|.-
T Consensus        89 daDiVIitaG~p~kp---G~tR~d----ll~~N~~I~----k~i~~~I~k~~P~a~ilvvtNP  140 (330)
T 3ldh_A           89 GSKLVVITAGARQQE---GESRLN----LVQRNVNIF----KFIIPNIVKHSPDCLKELHPEL  140 (330)
T ss_dssp             SCSEEEECCSCCCCS---SCCTTG----GGHHHHHHH----HHHHHHHHHHCTTCEEEECSSS
T ss_pred             CCCEEEEeCCCCCCC---CCCHHH----HHHhhHHHH----HHHHHHHHhhCCCceEEeCCCc
Confidence            579999999976422   223222    134444444    3334444443335677777653

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=95.52  E-value=0.052  Score=43.66  Aligned_cols=66  Identities=9%  Similarity=-0.058  Sum_probs=44.7

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------------CCceEEEeecCCHHHHHHHH
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------------PNVQTVQVDLQDWARTRAAV   76 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~~~~~~~~D~~~~~~v~~~~   76 (238)
                      ++++++ +|-| .|.+|.++++.|++.|++|++.+|++++.+.+.+..            .+.+++-.=+.+...++.++
T Consensus         5 ~~~~~I-~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~   82 (303)
T 3g0o_A            5 GTDFHV-GIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVL   82 (303)
T ss_dssp             --CCEE-EEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHH
T ss_pred             CCCCeE-EEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHH
Confidence            334333 3334 578999999999999999999999999888776542            12344444445555666665

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=95.43  E-value=0.017  Score=47.09  Aligned_cols=107  Identities=12%  Similarity=0.167  Sum_probs=62.6

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCC--------CceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFP--------NVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--------~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      +.|.| +|.+|.+++..|+..|. +|+++++++++++.......        ...+...  .+.       +.+..-|++
T Consensus         8 I~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~-------~a~~~aDvV   77 (321)
T 3p7m_A            8 ITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY-------KDLENSDVV   77 (321)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG-------GGGTTCSEE
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH-------HHHCCCCEE
Confidence            45567 48999999999999887 99999999876543222111        1222211  121       223357999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      |.++|.....   .++..+    .++.|..-...+.+.    +.+..+.+.++.+|.
T Consensus        78 Ii~ag~p~k~---G~~R~d----l~~~N~~i~~~i~~~----i~~~~p~a~vivvtN  123 (321)
T 3p7m_A           78 IVTAGVPRKP---GMSRDD----LLGINIKVMQTVGEG----IKHNCPNAFVICITN  123 (321)
T ss_dssp             EECCSCCCCT---TCCHHH----HHHHHHHHHHHHHHH----HHHHCTTCEEEECCS
T ss_pred             EEcCCcCCCC---CCCHHH----HHHHhHHHHHHHHHH----HHHHCCCcEEEEecC
Confidence            9999975321   233333    244555544444444    444433567777754

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=95.38  E-value=0.1  Score=42.91  Aligned_cols=111  Identities=16%  Similarity=0.153  Sum_probs=61.2

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC-------EEEEecCChH--hHH----HHHhhCCCceEEEeec-CCHHHHHHHHHhc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA-------IIIALSKTQA--NLD----SLKQAFPNVQTVQVDL-QDWARTRAAVSKV   79 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~-------~V~~~~r~~~--~~~----~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~   79 (238)
                      .+.|+||+|+||.+++..|+....       .+.+++.++.  .++    ++.. +.-........ ++.   .+.   +
T Consensus        26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~-~~~~~~~~~~~~~~~---~~a---~   98 (345)
T 4h7p_A           26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELED-CAFPLLDKVVVTADP---RVA---F   98 (345)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH-TTCTTEEEEEEESCH---HHH---T
T ss_pred             EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhh-cCccCCCcEEEcCCh---HHH---h
Confidence            456689999999999999987542       6888888753  233    2322 21111111112 122   122   3


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEEcc
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK-IQGSIVNVSS  142 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~isS  142 (238)
                      ..-|++|..||....   ..++.+|    .++.|..-.    +...+.+.+.. +..+|+.+|.
T Consensus        99 ~~advVvi~aG~prk---pGmtR~D----Ll~~Na~I~----~~~~~~i~~~a~~~~~vlvvsN  151 (345)
T 4h7p_A           99 DGVAIAIMCGAFPRK---AGMERKD----LLEMNARIF----KEQGEAIAAVAASDCRVVVVGN  151 (345)
T ss_dssp             TTCSEEEECCCCCCC---TTCCHHH----HHHHHHHHH----HHHHHHHHHHSCTTCEEEECSS
T ss_pred             CCCCEEEECCCCCCC---CCCCHHH----HHHHhHHHH----HHHHHHHHhhccCceEEEEeCC
Confidence            357999999998642   2345544    245555544    44444444432 1345555553

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.37  E-value=0.0052  Score=49.84  Aligned_cols=68  Identities=6%  Similarity=-0.066  Sum_probs=47.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEEc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLINN   88 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~~   88 (238)
                      +...+++|.|+ |++|...+..+...|++|++++ ++++.+.+++.... ..+  |  |       .+++ +++|++|.+
T Consensus       141 ~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~lGa~-~v~--~--d-------~~~v~~g~Dvv~d~  206 (315)
T 3goh_A          141 TKQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAKRGVR-HLY--R--E-------PSQVTQKYFAIFDA  206 (315)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHHHTEE-EEE--S--S-------GGGCCSCEEEEECC
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHHcCCC-EEE--c--C-------HHHhCCCccEEEEC
Confidence            45567899999 9999999998888999999999 77777777654322 222  2  2       1222 469999999


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      +|.
T Consensus       207 ~g~  209 (315)
T 3goh_A          207 VNS  209 (315)
T ss_dssp             ---
T ss_pred             CCc
Confidence            875

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=95.34  E-value=0.031  Score=45.34  Aligned_cols=107  Identities=11%  Similarity=0.208  Sum_probs=61.0

Q ss_pred             CCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHH----HHhhC----CCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDS----LKQAF----PNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~----~~~~~----~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      .|+|+ |.+|.+++..|+..|.  .|+++++++++++.    +.+..    .+..+...|  +.       +.+..-|++
T Consensus         4 ~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~-------~a~~~aDvV   73 (314)
T 3nep_X            4 TVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY-------GPTEDSDVC   73 (314)
T ss_dssp             EEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS-------GGGTTCSEE
T ss_pred             EEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH-------HHhCCCCEE
Confidence            45686 9999999999998886  89999999876543    22210    122222111  11       223357999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccc
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSI  143 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  143 (238)
                      |.++|.....   .++..+    .++.|..-    ++...+.+.+..+.+.++.+|.-
T Consensus        74 ii~ag~~~kp---G~~R~d----l~~~N~~i----~~~i~~~i~~~~p~a~vivvtNP  120 (314)
T 3nep_X           74 IITAGLPRSP---GMSRDD----LLAKNTEI----VGGVTEQFVEGSPDSTIIVVANP  120 (314)
T ss_dssp             EECCCC----------CHH----HHHHHHHH----HHHHHHHHHTTCTTCEEEECCSS
T ss_pred             EECCCCCCCC---CCCHHH----HHHhhHHH----HHHHHHHHHHhCCCcEEEecCCc
Confidence            9999975321   223333    23445443    45555555554446777777653

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.32  E-value=0.039  Score=44.31  Aligned_cols=106  Identities=14%  Similarity=0.131  Sum_probs=62.9

Q ss_pred             CCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHH----HHhh---CC-CceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDS----LKQA---FP-NVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~----~~~~---~~-~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      .|.|+ |+||.++|..|+.++.  ++++++.+++..+.    +.+.   .+ .......  .|.+       .+..-|++
T Consensus         4 ~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~-------~~~~aDvV   73 (294)
T 2x0j_A            4 GFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS-------LLKGSEII   73 (294)
T ss_dssp             EEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGG-------GGTTCSEE
T ss_pred             EEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHH-------HhCCCCEE
Confidence            34574 9999999999988774  79999999865432    2221   11 1222221  1222       22346999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      |..||.....   .++..+    .++.|..    +.+...+.+.+..+.+.++.+|.
T Consensus        74 vitAG~prkp---GmtR~d----Ll~~Na~----I~~~i~~~i~~~~p~aivlvvsN  119 (294)
T 2x0j_A           74 VVTAGLARKP---GMTRLD----LAHKNAG----IIKDIAKKIVENAPESKILVVTN  119 (294)
T ss_dssp             EECCCCCCCS---SSCHHH----HHHHHHH----HHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEecCCCCCC---CCchHH----HHHHHHH----HHHHHHHHHHhcCCceEEEEecC
Confidence            9999976422   345544    2455554    44555555555554566666654

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=95.30  E-value=0.045  Score=44.44  Aligned_cols=107  Identities=12%  Similarity=0.125  Sum_probs=61.9

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHH----HhhC----CCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSL----KQAF----PNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~----~~~~----~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      .+.|.|+ |.+|.+++..|+..|.  .|+++++++++++..    .+..    .++.+. .|  +       .+.+..-|
T Consensus         8 KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~-------~~a~~~aD   76 (317)
T 3d0o_A            8 KVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--E-------YSDCHDAD   76 (317)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--C-------GGGGTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--C-------HHHhCCCC
Confidence            3455688 9999999999998884  899999998665432    2211    122222 21  2       12233579


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      ++|..+|.....   .++..+    .+..|..-.    +...+.+.+..+.+.++++|.
T Consensus        77 vVvi~ag~~~~~---g~~r~d----l~~~n~~i~----~~i~~~i~~~~p~a~viv~tN  124 (317)
T 3d0o_A           77 LVVICAGAAQKP---GETRLD----LVSKNLKIF----KSIVGEVMASKFDGIFLVATN  124 (317)
T ss_dssp             EEEECCCCCCCT---TCCHHH----HHHHHHHHH----HHHHHHHHHTTCCSEEEECSS
T ss_pred             EEEECCCCCCCC---CCcHHH----HHHHHHHHH----HHHHHHHHHhCCCcEEEEecC
Confidence            999999875321   222222    234444433    444444444443567777654

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.27  E-value=0.045  Score=44.23  Aligned_cols=67  Identities=13%  Similarity=0.025  Sum_probs=46.7

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-----------CceEEEeecCCHHHHHHHH
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----------NVQTVQVDLQDWARTRAAV   76 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~D~~~~~~v~~~~   76 (238)
                      ..++..++|-| .|.+|..+++.|++.|++|++.+|++++.+.+.+..-           +.+++-.=+.++..+++++
T Consensus        18 ~~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~   95 (310)
T 3doj_A           18 GSHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVV   95 (310)
T ss_dssp             CCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             cccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHH
Confidence            33444556665 5789999999999999999999999988777764321           1334444445555666666

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.25  E-value=0.024  Score=46.15  Aligned_cols=108  Identities=9%  Similarity=0.095  Sum_probs=61.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhC-------CCceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      .+.|+|+ |.+|.+++..|+..+.  +++++++++++++.....+       .++.+. .|  +       .+.+..-|+
T Consensus         7 KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~-------~~a~~~aDv   75 (318)
T 1ez4_A            7 KVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--E-------YSDCKDADL   75 (318)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--C-------GGGGTTCSE
T ss_pred             EEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--C-------HHHhCCCCE
Confidence            3556688 9999999999998775  8999999987766432222       122222 11  1       122345799


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccc
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSI  143 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  143 (238)
                      +|..+|.....   .++..+    .+..|..    +++...+.+.+..+.+.++++|--
T Consensus        76 Vii~ag~~~~~---g~~R~d----l~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNP  123 (318)
T 1ez4_A           76 VVITAGAPQKP---GESRLD----LVNKNLN----ILSSIVKPVVDSGFDGIFLVAANP  123 (318)
T ss_dssp             EEECCCC-----------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECSSS
T ss_pred             EEECCCCCCCC---CCCHHH----HHHHHHH----HHHHHHHHHHHhCCCeEEEEeCCc
Confidence            99999875321   122212    2334444    444555555554446777777543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.22  E-value=0.018  Score=46.00  Aligned_cols=42  Identities=17%  Similarity=0.107  Sum_probs=36.8

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ   54 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   54 (238)
                      ..++|.|++|.+|.++++.|++.|++|++.+|++++.+.+.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            357778988999999999999999999999999988777654

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.19  E-value=0.083  Score=42.86  Aligned_cols=76  Identities=14%  Similarity=0.086  Sum_probs=50.0

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----------CCceEEEeecCCHHHHHHHHH-----
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----------PNVQTVQVDLQDWARTRAAVS-----   77 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~~D~~~~~~v~~~~~-----   77 (238)
                      .++|-| .|.+|..+++.|++.|++|++.+|++++.+++.+..           .+..++-.=+.++..++.++.     
T Consensus        33 ~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~~~  111 (320)
T 4dll_A           33 KITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQGVA  111 (320)
T ss_dssp             EEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTCHH
T ss_pred             EEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchhHH
Confidence            455554 478999999999999999999999999888776542           123344444455555555553     


Q ss_pred             -hcCCccEEEEccC
Q psy14567         78 -KVGPVDVLINNAA   90 (238)
Q Consensus        78 -~~g~id~li~~ag   90 (238)
                       .+.+-.++|++..
T Consensus       112 ~~l~~~~~vi~~st  125 (320)
T 4dll_A          112 AAMKPGSLFLDMAS  125 (320)
T ss_dssp             HHCCTTCEEEECSC
T ss_pred             hhCCCCCEEEecCC
Confidence             2233345555543

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.12  E-value=0.077  Score=42.96  Aligned_cols=107  Identities=9%  Similarity=0.066  Sum_probs=63.8

Q ss_pred             CCCCCCCCchHHHHHHHHhhCC--CEEEEecCChHhHHHHHhhC-------CCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      +.|+|+ |.+|.+++..|+..+  .+++++++++++++.....+       .++.+.. |  +.+       .+..-|++
T Consensus         3 I~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~-------a~~~aD~V   71 (310)
T 2xxj_A            3 VGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYG-------DLEGARAV   71 (310)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG-------GGTTEEEE
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHH-------HhCCCCEE
Confidence            456687 999999999999887  58999999987766432222       1222221 1  222       23457999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccc
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSI  143 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  143 (238)
                      |..+|.....   .++..+    .+..|..-.    +...+.+.+..+.+.++++|--
T Consensus        72 ii~ag~~~~~---g~~r~d----l~~~n~~i~----~~i~~~i~~~~p~a~iiv~tNP  118 (310)
T 2xxj_A           72 VLAAGVAQRP---GETRLQ----LLDRNAQVF----AQVVPRVLEAAPEAVLLVATNP  118 (310)
T ss_dssp             EECCCCCCCT---TCCHHH----HHHHHHHHH----HHHHHHHHHHCTTCEEEECSSS
T ss_pred             EECCCCCCCC---CcCHHH----HHHhhHHHH----HHHHHHHHHHCCCcEEEEecCc
Confidence            9999875321   233332    234444444    4444444444446778777543

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=95.11  E-value=0.036  Score=47.81  Aligned_cols=68  Identities=9%  Similarity=-0.044  Sum_probs=48.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      ...++++|.|. |+||..+++.+...|++|+++++++.+.+...+..  +.     +.+.+   ++++   ..|++|.+.
T Consensus       272 l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~G--a~-----~~~l~---e~l~---~aDvVi~at  337 (494)
T 3ce6_A          272 IGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAMMEG--FD-----VVTVE---EAIG---DADIVVTAT  337 (494)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT--CE-----ECCHH---HHGG---GCSEEEECS
T ss_pred             CCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC--CE-----EecHH---HHHh---CCCEEEECC
Confidence            34566777775 89999999999999999999999998876655432  22     12332   2333   469999887


Q ss_pred             CC
Q psy14567         90 AV   91 (238)
Q Consensus        90 g~   91 (238)
                      |.
T Consensus       338 gt  339 (494)
T 3ce6_A          338 GN  339 (494)
T ss_dssp             SS
T ss_pred             CC
Confidence            53

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.10  E-value=0.038  Score=45.71  Aligned_cols=41  Identities=12%  Similarity=0.098  Sum_probs=34.2

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA   55 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (238)
                      .++|.| .|.+|..+++.|++.|++|.+.+|++++.+.+.+.
T Consensus        24 kIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~   64 (358)
T 4e21_A           24 QIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALERE   64 (358)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT
T ss_pred             EEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC
Confidence            345555 57899999999999999999999999988777654

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=95.09  E-value=0.25  Score=39.96  Aligned_cols=74  Identities=11%  Similarity=0.058  Sum_probs=48.3

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHH----HHhhCC----CceEEEeecCCHHHHHHHHHh
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDS----LKQAFP----NVQTVQVDLQDWARTRAAVSK   78 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~----~~~~~~----~~~~~~~D~~~~~~v~~~~~~   78 (238)
                      .++...+.|.|+ |.+|.+++..|+..|.  +|++++++++.++.    +.+..+    +..+.. |  +.       +.
T Consensus         3 ~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~-------~a   71 (316)
T 1ldn_A            3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY-------DD   71 (316)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG-------GG
T ss_pred             CCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH-------HH
Confidence            334445677788 9999999999988774  89999999875443    222221    222221 1  11       22


Q ss_pred             cCCccEEEEccCCCC
Q psy14567         79 VGPVDVLINNAAVAR   93 (238)
Q Consensus        79 ~g~id~li~~ag~~~   93 (238)
                      +..-|++|.++|...
T Consensus        72 l~~aDvViia~~~~~   86 (316)
T 1ldn_A           72 CRDADLVVICAGANQ   86 (316)
T ss_dssp             TTTCSEEEECCSCCC
T ss_pred             hCCCCEEEEcCCCCC
Confidence            345799999998764

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.01  E-value=0.059  Score=42.89  Aligned_cols=42  Identities=19%  Similarity=0.057  Sum_probs=35.1

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC---EEEEecCChHhHHHHHhhC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA---IIIALSKTQANLDSLKQAF   56 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~   56 (238)
                      .++|-|+ |.+|.++++.|++.|.   +|++.+|++++++.+.+.+
T Consensus         5 ~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~   49 (280)
T 3tri_A            5 NITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC   49 (280)
T ss_dssp             CEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT
T ss_pred             EEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc
Confidence            3455565 7899999999999998   8999999999988887653

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=94.98  E-value=0.045  Score=43.95  Aligned_cols=36  Identities=11%  Similarity=-0.111  Sum_probs=31.4

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN   48 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~   48 (238)
                      +.++|.||.|.||.++++.|.+.|++|.+.+|+++.
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~   57 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA   57 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc
Confidence            457777889999999999999999999999988653

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=94.92  E-value=0.04  Score=44.48  Aligned_cols=106  Identities=8%  Similarity=0.090  Sum_probs=57.7

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhCC-------CceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFP-------NVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      +.|.|+ |.+|.+++..|+..|.  +|++.++++++++.......       ...+..   .+.       +.+..-|++
T Consensus         3 I~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~-------~a~~~aDvV   71 (304)
T 2v6b_A            3 VGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH-------SELADAQVV   71 (304)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG-------GGGTTCSEE
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH-------HHhCCCCEE
Confidence            445687 8999999999999998  99999999886654322221       112221   121       223457999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      |.++|.....   .++.    ...+..|+.-...+.+.+.++    .+.+.++++|-
T Consensus        72 Ii~~~~~~~~---g~~r----~dl~~~n~~i~~~i~~~i~~~----~p~~~vi~~tN  117 (304)
T 2v6b_A           72 ILTAGANQKP---GESR----LDLLEKNADIFRELVPQITRA----APDAVLLVTSN  117 (304)
T ss_dssp             EECC-------------------CHHHHHHHHHHHHHHHHHH----CSSSEEEECSS
T ss_pred             EEcCCCCCCC---CCcH----HHHHHhHHHHHHHHHHHHHHh----CCCeEEEEecC
Confidence            9999865321   1111    122344555444444554443    22456665543

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=94.92  E-value=0.022  Score=45.39  Aligned_cols=41  Identities=17%  Similarity=0.054  Sum_probs=33.5

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ   54 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   54 (238)
                      +.++|.|+ |.+|.++|..|+..|++|++.+|+++.++...+
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKK   45 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            34455554 789999999999999999999999988776654

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=94.82  E-value=0.02  Score=46.49  Aligned_cols=79  Identities=9%  Similarity=-0.018  Sum_probs=51.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCC--ceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN--VQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      ..+.++|.|++.-+|+.+|+.|+..|++|.++.|+..+..+.......  .....+..++++++.+.+.+   -|++|..
T Consensus       176 ~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~---ADIVIsA  252 (320)
T 1edz_A          176 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLD---SDVVITG  252 (320)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHH---CSEEEEC
T ss_pred             CCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhcc---CCEEEEC
Confidence            455566678766679999999999999999999884332222122211  11112222455677777775   5999999


Q ss_pred             cCCC
Q psy14567         89 AAVA   92 (238)
Q Consensus        89 ag~~   92 (238)
                      .|..
T Consensus       253 tg~p  256 (320)
T 1edz_A          253 VPSE  256 (320)
T ss_dssp             CCCT
T ss_pred             CCCC
Confidence            9864

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=94.80  E-value=0.052  Score=43.23  Aligned_cols=61  Identities=15%  Similarity=-0.009  Sum_probs=43.0

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-----------CceEEEeecCCHHHHHHHH
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----------NVQTVQVDLQDWARTRAAV   76 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~D~~~~~~v~~~~   76 (238)
                      ++|-| .|.+|.++++.|++.|++|.+.+|++++.+.+.+..-           +.+++-.=+.+...+++.+
T Consensus         4 I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~   75 (287)
T 3pdu_A            4 YGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVC   75 (287)
T ss_dssp             EEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             EEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence            44444 5789999999999999999999999988777665431           1333444444555666665

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=94.80  E-value=0.062  Score=44.09  Aligned_cols=76  Identities=9%  Similarity=0.091  Sum_probs=46.9

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~   87 (238)
                      +...+++|.|++|++|...+..+...| .+|+.++ +.++.+.+. ... -..  .| .+.+..+++.+.. +.+|++|.
T Consensus       141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga-~~~--~~-~~~~~~~~~~~~~~~g~Dvv~d  214 (349)
T 4a27_A          141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSV-THL--FD-RNADYVQEVKRISAEGVDIVLD  214 (349)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGS-SEE--EE-TTSCHHHHHHHHCTTCEEEEEE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCC-cEE--Ec-CCccHHHHHHHhcCCCceEEEE
Confidence            345678999999999999988776665 5788776 455555554 322 222  23 3322222222212 46999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      +.|.
T Consensus       215 ~~g~  218 (349)
T 4a27_A          215 CLCG  218 (349)
T ss_dssp             ECC-
T ss_pred             CCCc
Confidence            9974

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=94.76  E-value=0.023  Score=46.25  Aligned_cols=107  Identities=15%  Similarity=0.112  Sum_probs=62.5

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhC-------CCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      ++|.|+ |.+|.+++..|+..|.  +|++.++++++++.+....       ....+.   .++.+       .+..-|++
T Consensus         3 I~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~---~~d~~-------~~~~aDvV   71 (319)
T 1a5z_A            3 IGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY---AGDYA-------DLKGSDVV   71 (319)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE---ECCGG-------GGTTCSEE
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE---eCCHH-------HhCCCCEE
Confidence            345677 8999999999999998  9999999988766554221       111221   12321       23357999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccc
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSI  143 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  143 (238)
                      |.+++.....   .++..+    ....|..-...+.+.+.++    .+.+.++.++..
T Consensus        72 iiav~~~~~~---g~~r~d----l~~~n~~i~~~i~~~i~~~----~~~~~ii~~tNp  118 (319)
T 1a5z_A           72 IVAAGVPQKP---GETRLQ----LLGRNARVMKEIARNVSKY----APDSIVIVVTNP  118 (319)
T ss_dssp             EECCCCCCCS---SCCHHH----HHHHHHHHHHHHHHHHHHH----CTTCEEEECSSS
T ss_pred             EEccCCCCCC---CCCHHH----HHHHHHHHHHHHHHHHHhh----CCCeEEEEeCCc
Confidence            9999865421   122222    2344444444444444433    224566666443

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=94.73  E-value=0.072  Score=45.80  Aligned_cols=42  Identities=7%  Similarity=0.084  Sum_probs=35.0

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF   56 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (238)
                      .++|.| .|.+|.++++.|++.|++|.+.+|++++.+.+.+..
T Consensus         7 ~IgvIG-~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~   48 (474)
T 2iz1_A            7 NFGVVG-MAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEH   48 (474)
T ss_dssp             SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT
T ss_pred             cEEEEe-eHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhC
Confidence            355555 478999999999999999999999999888877653

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=94.72  E-value=0.028  Score=45.99  Aligned_cols=70  Identities=14%  Similarity=0.058  Sum_probs=45.3

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhh-------CC-CceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQA-------FP-NVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~-------~~-~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      +.|.|| |.+|.+++..|+..|. +|++.+++++.++.....       .. ...+..  .+|.+   +.++   .-|++
T Consensus        12 I~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~--t~d~~---ea~~---~aDiV   82 (331)
T 1pzg_A           12 VAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA--EYSYE---AALT---GADCV   82 (331)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE--ECSHH---HHHT---TCSEE
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE--eCCHH---HHhC---CCCEE
Confidence            455687 8999999999999997 999999998765542111       11 111111  02322   2333   46999


Q ss_pred             EEccCCCC
Q psy14567         86 INNAAVAR   93 (238)
Q Consensus        86 i~~ag~~~   93 (238)
                      |..+|...
T Consensus        83 i~a~g~p~   90 (331)
T 1pzg_A           83 IVTAGLTK   90 (331)
T ss_dssp             EECCSCSS
T ss_pred             EEccCCCC
Confidence            99998754

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=94.65  E-value=0.025  Score=51.91  Aligned_cols=77  Identities=12%  Similarity=0.108  Sum_probs=50.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++|.||+||+|.+.+......|++|+++.+++ +.+.+.  .+.-.+  .|..+.+..+.+.+..  ..+|++++
T Consensus       344 ~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~--lga~~v--~~~~~~~~~~~i~~~t~g~GvDvVld  418 (795)
T 3slk_A          344 RPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAVE--LSREHL--ASSRTCDFEQQFLGATGGRGVDVVLN  418 (795)
T ss_dssp             CTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGSC--SCGGGE--ECSSSSTHHHHHHHHSCSSCCSEEEE
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhhh--cChhhe--eecCChhHHHHHHHHcCCCCeEEEEE
Confidence            4566889999999999999998888999999988765 322221  222222  2334433333343333  25999999


Q ss_pred             ccCC
Q psy14567         88 NAAV   91 (238)
Q Consensus        88 ~ag~   91 (238)
                      +.|.
T Consensus       419 ~~gg  422 (795)
T 3slk_A          419 SLAG  422 (795)
T ss_dssp             CCCT
T ss_pred             CCCc
Confidence            8864

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=94.62  E-value=0.12  Score=41.93  Aligned_cols=112  Identities=14%  Similarity=0.066  Sum_probs=59.3

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhCCCc-eE-EEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNV-QT-VQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~-~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      .+.|+|+ |.+|.+++..|+..|.  +|+++++++++++.......+. .+ ..+.++. .+    .+.+..-|++|.++
T Consensus         9 KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~~----~~a~~~aDvVii~~   82 (318)
T 1y6j_A            9 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA-GD----YSDVKDCDVIVVTA   82 (318)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC---C----GGGGTTCSEEEECC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE-CC----HHHhCCCCEEEEcC
Confidence            3555687 9999999999999887  8999999886544322221111 00 0112221 11    12244679999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      |.....   .++..    ..+..|..-...+.+...++    .+.+.++.+|.
T Consensus        83 g~p~k~---g~~r~----dl~~~n~~i~~~i~~~i~~~----~p~a~viv~tN  124 (318)
T 1y6j_A           83 GANRKP---GETRL----DLAKKNVMIAKEVTQNIMKY----YNHGVILVVSN  124 (318)
T ss_dssp             CC---------CHH----HHHHHHHHHHHHHHHHHHHH----CCSCEEEECSS
T ss_pred             CCCCCC---CcCHH----HHHHhhHHHHHHHHHHHHHh----CCCcEEEEecC
Confidence            875321   22222    23455655555555555443    33566766544

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=94.60  E-value=0.032  Score=46.21  Aligned_cols=45  Identities=9%  Similarity=0.065  Sum_probs=37.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA   55 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (238)
                      ...++++|.|. |.+|..+|+.|.+.|++|++.+++.++++++.++
T Consensus       171 L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~  215 (364)
T 1leh_A          171 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE  215 (364)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            34556677765 8899999999999999999999999888877665

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=94.53  E-value=0.071  Score=54.81  Aligned_cols=78  Identities=13%  Similarity=0.149  Sum_probs=55.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC---CceEEEeecCCHHHHHHHHHhc--CCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP---NVQTVQVDLQDWARTRAAVSKV--GPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~--g~id~l   85 (238)
                      ...+++|.||+||+|.+.+......|++|+++++++++.+.+.+.++   ...+  .|..+.+..+.+.+..  ..+|++
T Consensus      1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v--~~~~~~~~~~~i~~~t~g~GvDvV 1744 (2512)
T 2vz8_A         1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCF--ANSRDTSFEQHVLRHTAGKGVDLV 1744 (2512)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTE--EESSSSHHHHHHHHTTTSCCEEEE
T ss_pred             CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEE--ecCCCHHHHHHHHHhcCCCCceEE
Confidence            45678999999999999999888899999999999988887776432   2222  3444444334443333  258999


Q ss_pred             EEccC
Q psy14567         86 INNAA   90 (238)
Q Consensus        86 i~~ag   90 (238)
                      +++.|
T Consensus      1745 ld~~g 1749 (2512)
T 2vz8_A         1745 LNSLA 1749 (2512)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            88764

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=94.41  E-value=0.23  Score=39.94  Aligned_cols=68  Identities=16%  Similarity=0.242  Sum_probs=46.8

Q ss_pred             CCCCCCCCchHHHHHHHHhhCC--CEEEEecCChHhHHHHHhhCC--------CceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANLDSLKQAFP--------NVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      ++|.| +|.+|.+++..|+..|  .+|++.+|++++++.+.....        .+....   ++.       +.+..-|+
T Consensus         4 I~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~d~-------~~~~~aDv   72 (309)
T 1hyh_A            4 IGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDW-------AALADADV   72 (309)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCG-------GGGTTCSE
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe---CCH-------HHhCCCCE
Confidence            45567 6899999999999999  799999999988766543221        122211   222       22335799


Q ss_pred             EEEccCCCC
Q psy14567         85 LINNAAVAR   93 (238)
Q Consensus        85 li~~ag~~~   93 (238)
                      +|.+++...
T Consensus        73 Viiav~~~~   81 (309)
T 1hyh_A           73 VISTLGNIK   81 (309)
T ss_dssp             EEECCSCGG
T ss_pred             EEEecCCcc
Confidence            999998653

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=94.40  E-value=0.016  Score=47.34  Aligned_cols=37  Identities=14%  Similarity=-0.008  Sum_probs=31.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHH
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDS   51 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~   51 (238)
                      .+.|.|| |.+|.+++..|+..|. .|++.+++++.++.
T Consensus        16 kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~   53 (328)
T 2hjr_A           16 KISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQG   53 (328)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHH
Confidence            4566687 8999999999999998 99999999877654

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=94.40  E-value=0.014  Score=44.79  Aligned_cols=44  Identities=20%  Similarity=0.175  Sum_probs=36.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEE-ecCChHhHHHHHhh
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIA-LSKTQANLDSLKQA   55 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~   55 (238)
                      .+..++|.| +|.+|.++++.|++.|.+|++ .+|++++.+++.+.
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~   66 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDR   66 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHH
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHH
Confidence            345566777 689999999999999999988 99999888777654

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=94.36  E-value=0.12  Score=40.43  Aligned_cols=70  Identities=17%  Similarity=0.154  Sum_probs=43.4

Q ss_pred             CCCCCCCchHHHHHHHHhhCCC-EEEEecCCh-------------------HhH----HHHHhhCCCceEEE--eecCCH
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQ-------------------ANL----DSLKQAFPNVQTVQ--VDLQDW   69 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~-------------------~~~----~~~~~~~~~~~~~~--~D~~~~   69 (238)
                      +|.|+ ||+|.++++.|+..|. ++.++++..                   .+.    +.+.+..+.+.+..  .+++ +
T Consensus        32 lvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~~-~  109 (251)
T 1zud_1           32 LIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLT-G  109 (251)
T ss_dssp             EEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCCC-H
T ss_pred             EEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccCC-H
Confidence            34444 6799999999999998 777775421                   222    23444445544433  3343 3


Q ss_pred             HHHHHHHHhcCCccEEEEccC
Q psy14567         70 ARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        70 ~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.+.++++.   .|+||.+..
T Consensus       110 ~~~~~~~~~---~DvVi~~~d  127 (251)
T 1zud_1          110 EALKDAVAR---ADVVLDCTD  127 (251)
T ss_dssp             HHHHHHHHH---CSEEEECCS
T ss_pred             HHHHHHHhc---CCEEEECCC
Confidence            556666664   699988753

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=94.36  E-value=0.073  Score=43.32  Aligned_cols=69  Identities=12%  Similarity=0.069  Sum_probs=45.4

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCC--------CceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFP--------NVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~--------~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      +.|.|| |.+|..++..|+..|. .|++.++++++++.......        ...+...  +|.       +.+..-|++
T Consensus         7 I~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d~-------~al~~aD~V   76 (322)
T 1t2d_A            7 IVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NTY-------DDLAGADVV   76 (322)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CCG-------GGGTTCSEE
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CCH-------HHhCCCCEE
Confidence            455687 8999999999999998 89999999876653322211        1111110  121       223357999


Q ss_pred             EEccCCCC
Q psy14567         86 INNAAVAR   93 (238)
Q Consensus        86 i~~ag~~~   93 (238)
                      |.++|...
T Consensus        77 i~a~g~p~   84 (322)
T 1t2d_A           77 IVTAGFTK   84 (322)
T ss_dssp             EECCSCSS
T ss_pred             EEeCCCCC
Confidence            99998653

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=94.32  E-value=0.15  Score=40.58  Aligned_cols=60  Identities=12%  Similarity=0.049  Sum_probs=42.2

Q ss_pred             CCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-----------CceEEEeecCCHHHHHHHH
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----------NVQTVQVDLQDWARTRAAV   76 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~D~~~~~~v~~~~   76 (238)
                      +|-| .|.+|.++++.|++.|++|++.+|++++.+.+.+..-           +.+++-.=+.++..+++.+
T Consensus         5 ~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~   75 (287)
T 3pef_A            5 GFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVC   75 (287)
T ss_dssp             EEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHH
T ss_pred             EEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHH
Confidence            3444 4789999999999999999999999988777655321           1333444445555666665

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=94.32  E-value=0.038  Score=43.52  Aligned_cols=65  Identities=17%  Similarity=0.127  Sum_probs=48.3

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      .++|.|+ |++|+++++.|.+.|++|.+.+|+.++.+++.+..+. .     ..+.+   ++ +   ..|++|++.+..
T Consensus       118 ~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~-~-----~~~~~---~~-~---~~Divi~~tp~~  182 (263)
T 2d5c_A          118 PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGL-R-----AVPLE---KA-R---EARLLVNATRVG  182 (263)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTC-E-----ECCGG---GG-G---GCSEEEECSSTT
T ss_pred             eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcc-c-----hhhHh---hc-c---CCCEEEEccCCC
Confidence            5666675 7899999999999999999999999888887765432 1     12222   22 2   479999999765

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=94.30  E-value=0.038  Score=43.27  Aligned_cols=40  Identities=13%  Similarity=0.068  Sum_probs=34.1

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA   55 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (238)
                      ++|.| .|.+|..+++.|.+.|..|.+.+|++++.+.+.+.
T Consensus         6 i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~   45 (259)
T 2ahr_A            6 IGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQ   45 (259)
T ss_dssp             EEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHH
Confidence            45556 58899999999999999999999999988877654

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=94.27  E-value=0.056  Score=43.74  Aligned_cols=69  Identities=13%  Similarity=0.110  Sum_probs=44.3

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhC--------CCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAF--------PNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      +.|+|+ |.+|..++..|+..|. .|+++++++++++......        ....+...  +|.       +.+..-|++
T Consensus         5 I~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~-------~a~~~aD~V   74 (309)
T 1ur5_A            5 ISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNY-------ADTANSDVI   74 (309)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG-------GGGTTCSEE
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCH-------HHHCCCCEE
Confidence            556788 9999999999999996 8999999887665432211        11111110  121       223357999


Q ss_pred             EEccCCCC
Q psy14567         86 INNAAVAR   93 (238)
Q Consensus        86 i~~ag~~~   93 (238)
                      |.++|...
T Consensus        75 i~a~g~p~   82 (309)
T 1ur5_A           75 VVTSGAPR   82 (309)
T ss_dssp             EECCCC--
T ss_pred             EEcCCCCC
Confidence            99998753

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=94.25  E-value=0.17  Score=40.49  Aligned_cols=76  Identities=13%  Similarity=0.160  Sum_probs=50.0

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC----------CceEEEeecCCHHHHHHHHHhc----
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP----------NVQTVQVDLQDWARTRAAVSKV----   79 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~D~~~~~~v~~~~~~~----   79 (238)
                      .++|-| .|.+|..+++.|++.|++|++.+|++++.+.+.+..-          ..+++-.=+.+...++++++.+    
T Consensus        17 ~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~l~~~l   95 (296)
T 3qha_A           17 KLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAAADLIHITVLDDAQVREVVGELAGHA   95 (296)
T ss_dssp             CEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTTSSEEEECCSSHHHHHHHHHHHHTTC
T ss_pred             eEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHhCCEEEEECCChHHHHHHHHHHHHhc
Confidence            345555 5789999999999999999999999987766654321          1344444455555666555443    


Q ss_pred             CCccEEEEccC
Q psy14567         80 GPVDVLINNAA   90 (238)
Q Consensus        80 g~id~li~~ag   90 (238)
                      .+-.++|++..
T Consensus        96 ~~g~ivv~~st  106 (296)
T 3qha_A           96 KPGTVIAIHST  106 (296)
T ss_dssp             CTTCEEEECSC
T ss_pred             CCCCEEEEeCC
Confidence            23355666554

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=94.23  E-value=0.043  Score=44.13  Aligned_cols=40  Identities=10%  Similarity=-0.011  Sum_probs=33.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHH
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSL   52 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~   52 (238)
                      ++.++|-|+ |.+|.++|..|++.|++|++.+|+++.++..
T Consensus        15 ~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           15 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            344666666 8899999999999999999999998876653

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=94.20  E-value=0.11  Score=41.88  Aligned_cols=107  Identities=14%  Similarity=0.146  Sum_probs=63.2

Q ss_pred             CCCCCCCCchHHHHHHHHhhC--CCEEEEecCChHhHHHHHhhC--------CCceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQH--EAIIIALSKTQANLDSLKQAF--------PNVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      +.|.|+ |.+|.+++..|+..  |.+|++.++++++++......        ....+..  .+|.+       .+..-|+
T Consensus         3 I~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~--t~d~~-------~l~~aDv   72 (310)
T 1guz_A            3 ITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG--SNDYA-------DTANSDI   72 (310)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE--ESCGG-------GGTTCSE
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE--CCCHH-------HHCCCCE
Confidence            345687 99999999999985  789999999987766543211        1111111  02211       1345799


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      +|.+++....   ...+.    ...++.|..-...+.+.+.++    .+.+.++.++.
T Consensus        73 Viiav~~p~~---~g~~r----~dl~~~n~~i~~~i~~~i~~~----~~~~~viv~tN  119 (310)
T 1guz_A           73 VIITAGLPRK---PGMTR----EDLLMKNAGIVKEVTDNIMKH----SKNPIIIVVSN  119 (310)
T ss_dssp             EEECCSCCCC---TTCCH----HHHHHHHHHHHHHHHHHHHHH----CSSCEEEECCS
T ss_pred             EEEeCCCCCC---CCCCH----HHHHHHHHHHHHHHHHHHHHh----CCCcEEEEEcC
Confidence            9999985421   12222    233455665555555555554    22567777654

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=94.15  E-value=0.14  Score=41.82  Aligned_cols=23  Identities=13%  Similarity=0.128  Sum_probs=20.6

Q ss_pred             CchHHHHHHHHhhCCC-EEEEecC
Q psy14567         22 PGIGRCIVEKLSQHEA-IIIALSK   44 (238)
Q Consensus        22 ~gIG~~ia~~l~~~G~-~V~~~~r   44 (238)
                      ||+|.++++.|+..|. ++.++++
T Consensus        43 GGlGs~va~~La~aGVg~ItlvD~   66 (340)
T 3rui_A           43 GTLGCYVSRALIAWGVRKITFVDN   66 (340)
T ss_dssp             SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CHHHHHHHHHHHHcCCCEEEEecC
Confidence            7899999999999998 7888765

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=94.10  E-value=0.21  Score=40.18  Aligned_cols=58  Identities=14%  Similarity=0.077  Sum_probs=46.4

Q ss_pred             CCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-----------CceEEEeecCCHHHHHHHHHh
Q psy14567         21 KPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----------NVQTVQVDLQDWARTRAAVSK   78 (238)
Q Consensus        21 s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~D~~~~~~v~~~~~~   78 (238)
                      -|-+|..+|+.|++.|+.|.+.+|++++.+.+.+...           ...++-.=+.+.+.+++++..
T Consensus        11 lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~Ga~~a~s~~e~~~~~dvv~~~l~~~~~v~~V~~~   79 (300)
T 3obb_A           11 LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLD   79 (300)
T ss_dssp             CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTTCSEEEECCSCHHHHHHHHHS
T ss_pred             ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcCCEEcCCHHHHHhcCCceeecCCchHHHHHHHhc
Confidence            3689999999999999999999999999888876542           345555666777888887743

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	238
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	7e-51
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-50
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-43
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	3e-42
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	1e-40
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	3e-40
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	6e-39
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	4e-38
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	8e-38
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-36
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-35
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	3e-35
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-35
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	7e-35
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	8e-35
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	1e-34
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-34
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	3e-34
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	5e-34
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	8e-34
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-33
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-33
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	6e-33
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	7e-33
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	9e-33
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-30
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-29
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	4e-29
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	4e-29
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	5e-29
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	5e-29
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	2e-28
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	3e-28
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	1e-27
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	2e-27
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	4e-27
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	6e-27
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	1e-26
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-26
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	2e-26
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	3e-26
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	4e-26
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-25
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-25
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-25
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	5e-25
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-24
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-24
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-24
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-23
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-23
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	3e-23
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	4e-23
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-22
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	6e-22
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	7e-22
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	4e-21
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	5e-21
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	4e-16
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	6e-16
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	3e-14
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-10
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-05
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	8e-05
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	0.001
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	0.001

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (415), Expect = 7e-51
 Identities = 98/194 (50%), Positives = 136/194 (70%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V+ L    A ++A+S+TQA+LDSL +  P ++ V VDL DW  T  A+  VGPV
Sbjct: 18  GIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPV 77

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAAVA    FL++ +E      F+VN++AVI +SQ+V++ +I   + G+IVNVSS
Sbjct: 78  DLLVNNAAVALLQPFLEVTKEAFDR-SFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSS 136

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
              + A+  H++Y ++K ALD +T+ MALELGP+ IRVN+V PTVVMT MG+  WSDP K
Sbjct: 137 QCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHK 196

Query: 203 AGPMLAKTPLGRFA 216
           A  ML + PLG+FA
Sbjct: 197 AKTMLNRIPLGKFA 210

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  162 bits (411), Expect = 2e-50
 Identities = 82/194 (42%), Positives = 124/194 (63%), Gaps = 1/194 (0%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR  V+ L    A ++A+++T ++L SL +  P ++ V VDL DW  T  A+  +GPV
Sbjct: 16  GIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPV 75

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+NNAA+     FL++ +E   D  F VN+++V  +SQ+V++ MI+  + GSIVNVSS
Sbjct: 76  DLLVNNAALVIMQPFLEVTKEA-FDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSS 134

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
           +           YS++K A+  +T+ MA+ELGP+ IRVNSV PTVV+T MG+   +DP  
Sbjct: 135 MVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEF 194

Query: 203 AGPMLAKTPLGRFA 216
           A  +  + PL +FA
Sbjct: 195 ARKLKERHPLRKFA 208

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  144 bits (365), Expect = 3e-43
 Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 12/202 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIGR I +  ++  A++          +  +         QVDL+D       V +    
Sbjct: 16  GIGRAIAQAFAREGALVALCDLRPEGKEVAEAI--GGAFFQVDLEDERERVRFVEEAAYA 73

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            G VDVL+NNAA+A     L +        + +VN+ A +++S + ++ M       +IV
Sbjct: 74  LGRVDVLVNNAAIAAPGSALTVRLPE-WRRVLEVNLTAPMHLSALAAREMRKVGGG-AIV 131

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR---- 194
           NV+S+ G  A + +  Y+ASK  L ++TR++AL+L P  IRVN+V P  + T+       
Sbjct: 132 NVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIA 191

Query: 195 TGWSDPAKAGPMLAKTPLGRFA 216
                            L R  
Sbjct: 192 LSPDPERTRRDWEDLHALRRLG 213

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  141 bits (357), Expect = 3e-42
 Identities = 43/202 (21%), Positives = 86/202 (42%), Gaps = 10/202 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG  IV       A ++   K ++   +L+Q  P    +  D+      +  VS+    
Sbjct: 17  GIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRR 76

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            G +D ++NNA      +  +         + ++N+     ++++    +   +  G+++
Sbjct: 77  FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ--GNVI 134

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS 198
           N+SS+ G         Y A+K A+ ++T+ +AL+  PY +RVN + P  + T +     +
Sbjct: 135 NISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAA 194

Query: 199 ----DPAKAGPMLAKTPLGRFA 216
                 A     +   PLGR  
Sbjct: 195 LMPDPRASIREGMLAQPLGRMG 216

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (347), Expect = 1e-40
 Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 18/209 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP------NVQTVQVDLQDWARTRAAV 76
           GIG  +   L Q    ++  ++T  N++ L            +   + DL +     +  
Sbjct: 21  GIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMF 80

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
           S +      VD+ INNA +AR D  L          +F+VN+ A+   ++   ++M +  
Sbjct: 81  SAIRSQHSGVDICINNAGLARPDTLLSGSTSG-WKDMFNVNVLALSICTREAYQSMKERN 139

Query: 133 IQ-GSIVNVSSIAGKTAL--EGHTIYSASKAALDSITRTMALEL--GPYNIRVNSVQPTV 187
           +  G I+N++S++G   L       YSA+K A+ ++T  +  EL     +IR   + P V
Sbjct: 140 VDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGV 199

Query: 188 VMTQMGRTGWSDPAKAGPMLAKTPLGRFA 216
           V TQ          +     A     +  
Sbjct: 200 VETQFAFKLHDKDPEK--AAATYEQMKCL 226

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  136 bits (344), Expect = 3e-40
 Identities = 48/200 (24%), Positives = 83/200 (41%), Gaps = 8/200 (4%)

Query: 23  GIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV- 79
           GIGR I E+ +   A   I  L        +++     V TV+ D+       A   +V 
Sbjct: 16  GIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVI 75

Query: 80  ---GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGS 136
              G  D+L+NNA +     F ++  E      F++N+ +   +++     M  +   G 
Sbjct: 76  STFGRCDILVNNAGIYPLIPFDELTFEQ-WKKTFEINVDSGFLMAKAFVPGMKRNG-WGR 133

Query: 137 IVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG 196
           I+N++S      +E +T Y ++KAA    TR +A +LG   I VN++ P++V T      
Sbjct: 134 IINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEAS 193

Query: 197 WSDPAKAGPMLAKTPLGRFA 216
                          + R  
Sbjct: 194 ALSAMFDVLPNMLQAIPRLQ 213

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  133 bits (337), Expect = 6e-39
 Identities = 51/215 (23%), Positives = 85/215 (39%), Gaps = 22/215 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAA 75
           GIGR      ++  A +    +    L+  +Q          NV +V  D+   A     
Sbjct: 16  GIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEI 75

Query: 76  VSKV----GPVDVLINNAAVARFDRFLDIDEE---NLIDSIFDVNIKAVINISQVVSKTM 128
           +S      G +D+L+NNA  A  D              D+  ++N+++VI +++     +
Sbjct: 76  LSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHL 135

Query: 129 IDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
              K +   ++ S  +G  A      YS +KAA+D  TR  A++L  + IRVNS+ P +V
Sbjct: 136 SSTKGEIVNIS-SIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLV 194

Query: 189 MTQMGRTGWSDPAKAG-------PMLAKTPLGRFA 216
            T  G         +         M    P G   
Sbjct: 195 ATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMG 229

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  131 bits (330), Expect = 4e-38
 Identities = 53/206 (25%), Positives = 95/206 (46%), Gaps = 14/206 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG  IVE+L+   A +   S+ Q  L+      +     V+    DL   +  +  ++ 
Sbjct: 19  GIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNT 78

Query: 79  V-----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           V     G +++L+NNA +  +    D   E+    I  +N +A  ++S +    +   + 
Sbjct: 79  VANHFHGKLNILVNNAGIVIYKEAKDYTVED-YSLIMSINFEAAYHLSVLAHPFLKASER 137

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
             ++V +SS++G  A+    +Y A+K A+D +TR +A E    NIRVN V P V+ T + 
Sbjct: 138 G-NVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLV 196

Query: 194 RTGWSDPAKA---GPMLAKTPLGRFA 216
                DP +      ++ +  L R  
Sbjct: 197 EMTIQDPEQKENLNKLIDRCALRRMG 222

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  130 bits (328), Expect = 8e-38
 Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 11/203 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDW----ARTRAA 75
           GIG  I  K  +  A ++   +     +   ++      +Q  Q D  D         A 
Sbjct: 17  GIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDAT 76

Query: 76  VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
               GPV  L+NNA +A      +         +  VN+  V   +++  + M +  +  
Sbjct: 77  EKAFGPVSTLVNNAGIAVNKSVEETTTAE-WRKLLAVNLDGVFFGTRLGIQRMKNKGLGA 135

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALE--LGPYNIRVNSVQPTVVMTQMG 193
           SI+N+SSI G         Y+ASK A+  ++++ AL+  L  Y++RVN+V P  + T + 
Sbjct: 136 SIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLV 195

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
                          KTP+G   
Sbjct: 196 DDLPGAEEAMS-QRTKTPMGHIG 217

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  127 bits (321), Expect = 1e-36
 Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 12/203 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG  IVE+ +   A+I   ++ +  L+      ++    V     D          +  
Sbjct: 19  GIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQT 78

Query: 79  V-----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           V     G +D+LINN    R    LD   E+        N+++  ++SQ+    +     
Sbjct: 79  VSSMFGGKLDILINNLGAIRSKPTLDYTAED-FSFHISTNLESAYHLSQLAHPLLKASGC 137

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
             +I+ +SSIAG  +    +IYSA+K AL+ + R +A E     IR N+V P V+ T + 
Sbjct: 138 G-NIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLA 196

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
              + D  K   ++++ PLGRF 
Sbjct: 197 EAVYDDEFKKV-VISRKPLGRFG 218

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  125 bits (314), Expect = 1e-35
 Identities = 52/206 (25%), Positives = 85/206 (41%), Gaps = 10/206 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV-- 79
           G+G  +V+ L    A +      +A    L          V+ D+   A     ++ V  
Sbjct: 17  GVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQR 76

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G ++VL+NNA +           E+    +  +N ++V    Q     M +    GSI
Sbjct: 77  RLGTLNVLVNNAGILLPGDMETGRLED-FSRLLKINTESVFIGCQQGIAAMKETG--GSI 133

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP--YNIRVNSVQPTVVMTQMGRT 195
           +N++S++    +E +  YSASKAA+ ++TR  AL      Y IRVNS+ P  + T M + 
Sbjct: 134 INMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA 193

Query: 196 GWSDPAKAGPMLAKTPLGRFAGKLKP 221
                     +L    L R      P
Sbjct: 194 SLPKGVSKEMVLHDPKLNRAGRAYMP 219

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  124 bits (312), Expect = 3e-35
 Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 22/215 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAA 75
           GIGR      +Q  A +    ++   L+  +Q           V +V  D+         
Sbjct: 16  GIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQI 75

Query: 76  VSKV----GPVDVLINNAAVARFDRFLDIDEE---NLIDSIFDVNIKAVINISQVVSKTM 128
           ++      G +DVL+NNA  A  D F     +   ++      +N++AVI +++ V   +
Sbjct: 76  INSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHL 135

Query: 129 IDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
           +  K    +   S +AG  A      Y+ +KAALD  TR+ A++L  + IRVNSV P +V
Sbjct: 136 VASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMV 194

Query: 189 MTQMGRTGWSDPAKA-------GPMLAKTPLGRFA 216
            T            +              P+G   
Sbjct: 195 ETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAG 229

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  122 bits (308), Expect = 6e-35
 Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 10/198 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRA----AVSK 78
           GIGR  +E  ++  A ++A    +  L    +A      V +D+ D A        A++ 
Sbjct: 16  GIGRATLELFAKEGARLVACDIEEGPLREAAEAV-GAHPVVMDVADPASVERGFAEALAH 74

Query: 79  VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
           +G +D +++ A + R +    +  E+  + +  VN+     +++  S+ M +       +
Sbjct: 75  LGRLDGVVHYAGITRDNFHWKMPLED-WELVLRVNLTGSFLVAKAASEAMREKN--PGSI 131

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS 198
            +++        G   Y+AS A +  +TRT+ALELG + IRVN++ P  + T+M  T   
Sbjct: 132 VLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM--TAKV 189

Query: 199 DPAKAGPMLAKTPLGRFA 216
                   +A TPLGR  
Sbjct: 190 PEKVREKAIAATPLGRAG 207

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  122 bits (308), Expect = 7e-35
 Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 12/202 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIGR I + L++  + +I +S+TQ + DS    +K           D+         ++K
Sbjct: 21  GIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK 80

Query: 79  V----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           +      VD+L+NNA + R + FL +  +   + +   N+ ++  I+Q +SK MI+++  
Sbjct: 81  ILTEHKNVDILVNNAGITRDNLFLRMKNDE-WEDVLRTNLNSLFYITQPISKRMINNR-Y 138

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G I+N+SSI G T   G   YS+SKA +   T+++A EL   NI VN++ P  + + M  
Sbjct: 139 GRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTD 198

Query: 195 TGWSDPAKAGPMLAKTPLGRFA 216
                  K   +++  P GR  
Sbjct: 199 KISEQIKKN--IISNIPAGRMG 218

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (307), Expect = 8e-35
 Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 8/199 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIG+      ++  A +IA    ++ L  L+  +P +QT  +D+    +     ++V  +
Sbjct: 17  GIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVERL 75

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           DVL N A        LD +E++  D   ++N++++  + +     M+  +  G+I+N+SS
Sbjct: 76  DVLFNVAGFVHHGTVLDCEEKD-WDFSMNLNVRSMYLMIKAFLPKML-AQKSGNIINMSS 133

Query: 143 IAGKT-ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPA 201
           +A     +    +YS +KAA+  +T+++A +     IR N V P  V T   +       
Sbjct: 134 VASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARG 193

Query: 202 KAGP----MLAKTPLGRFA 216
                    L +   GRFA
Sbjct: 194 NPEEARNDFLKRQKTGRFA 212

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 1e-34
 Identities = 40/193 (20%), Positives = 75/193 (38%), Gaps = 13/193 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAA--- 75
           GIGR    + ++ ++ ++     +  L+      K     V T  VD  +     ++   
Sbjct: 18  GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKK 77

Query: 76  -VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
             +++G V +L+NNA V          +   I+  F+VN+ A    ++     M  +   
Sbjct: 78  VKAEIGDVSILVNNAGVVYTSDLFATQDPQ-IEKTFEVNVLAHFWTTKAFLPAMTKNN-H 135

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYN---IRVNSVQPTVVMTQ 191
           G IV V+S AG  ++     Y +SK A     +T+  EL       ++   + P  V T 
Sbjct: 136 GHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTG 195

Query: 192 MGRTGWSDPAKAG 204
             +   +      
Sbjct: 196 FIKNPSTSLGPTL 208

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  122 bits (306), Expect = 2e-34
 Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 19/210 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSL-----KQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG      ++   A +  + ++ A+   +     K+     +  Q D+ +       + 
Sbjct: 20  GIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ 79

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           ++    GP+  LI NA V+      ++  E+    ++DVN+  V N  + V+K  +  + 
Sbjct: 80  QIDADLGPISGLIANAGVSVVKPATELTHED-FAFVYDVNVFGVFNTCRAVAKLWLQKQQ 138

Query: 134 QGSIVNVS-------SIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPT 186
           +GSIV  S       + +          Y++SKAA  ++ + +A E     IRVN++ P 
Sbjct: 139 KGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPG 198

Query: 187 VVMTQMGRTGWSDPAKAGPMLAKTPLGRFA 216
            V T    T   D        +  PL RFA
Sbjct: 199 YVNTDQ--TAHMDKKIRDHQASNIPLNRFA 226

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  122 bits (307), Expect = 3e-34
 Identities = 38/196 (19%), Positives = 76/196 (38%), Gaps = 16/196 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIAL-------------SKTQANLDSLKQAFPNVQTVQVDLQDW 69
           G+GR      ++  A+++               S     ++ +++           ++  
Sbjct: 18  GLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAG 77

Query: 70  ART-RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTM 128
            +  + A+   G +DV++NNA + R   F  I +E+  D I  V+++    +++     M
Sbjct: 78  EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDW-DIIQRVHLRGSFQVTRAAWDHM 136

Query: 129 IDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVV 188
                 G I+  +S +G     G   YSA+K  L  +  T+ +E    NI  N++ P   
Sbjct: 137 KKQN-YGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG 195

Query: 189 MTQMGRTGWSDPAKAG 204
                     D  +A 
Sbjct: 196 SRMTETVMPEDLVEAL 211

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  120 bits (302), Expect = 5e-34
 Identities = 49/201 (24%), Positives = 79/201 (39%), Gaps = 9/201 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV-- 79
           G+G     +     A ++          +  +      +   +D+      +  V+    
Sbjct: 16  GLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYARE 75

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G VD L+NNA ++          E     + ++N+  V    + V   M D    GSI
Sbjct: 76  EFGSVDGLVNNAGISTGMFLETESVER-FRKVVEINLTGVFIGMKTVIPAMKDAG-GGSI 133

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           VN+SS AG   L   + Y ASK  +  +++  A+ELG   IRVNSV P +  T M     
Sbjct: 134 VNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETG 193

Query: 198 SDPAKAGPMLAKTPLGRFAGK 218
               +       TP+GR   +
Sbjct: 194 IRQGEG--NYPNTPMGRVGNE 212

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  120 bits (301), Expect = 8e-34
 Identities = 45/203 (22%), Positives = 81/203 (39%), Gaps = 10/203 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDW----ARTR 73
           G+G  I + L++    ++  S+         Q             + D+ ++        
Sbjct: 16  GLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE 75

Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           A   K G +D ++N A + R     +   +     + +VN+     + +     + +   
Sbjct: 76  AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQ-VIEVNLFGTYYVCREAFSLLRESDN 134

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
              I   S    +  +   + Y+ASK  + S+T+ +A E G Y IRVN + P    T+M 
Sbjct: 135 PSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMT 194

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
              +SDP K   ML + PLGR  
Sbjct: 195 EAVFSDPEKLDYMLKRIPLGRTG 217

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  120 bits (301), Expect = 1e-33
 Identities = 53/213 (24%), Positives = 88/213 (41%), Gaps = 20/213 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAA 75
           GIGR      ++  A +    + +  L+  KQ           +  V  D+ + +     
Sbjct: 15  GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDI 74

Query: 76  VSKV----GPVDVLINNAAVARFDRFLDIDE-ENLIDSIFDVNIKAVINISQVVSKTMID 130
           ++      G +D+L+NNA     D   + D+   L    F +N +AVI ++Q   + +I 
Sbjct: 75  INTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIK 134

Query: 131 HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
            K +   V+   +AG  A  G+  Y+ +KAALD  TR  A++L  + +RVNSV P  V T
Sbjct: 135 TKGEIVNVSSI-VAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVAT 193

Query: 191 QMGRTGWSDPAKA-------GPMLAKTPLGRFA 216
                       +       G      P+G   
Sbjct: 194 GFMGAMGLPETASDKLYSFIGSRKECIPVGHCG 226

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 4e-33
 Identities = 47/214 (21%), Positives = 78/214 (36%), Gaps = 29/214 (13%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAV 76
           GIGR   E L    A +  +          K A            +Q D+ D  + R   
Sbjct: 14  GIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTF 73

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            KV    G +D+L+NNA V     +         +    +N+ +VI+ + +    M    
Sbjct: 74  RKVVDHFGRLDILVNNAGVNNEKNW---------EKTLQINLVSVISGTYLGLDYMSKQN 124

Query: 133 --IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMAL--ELGPYNIRVNSVQPTVV 188
               G I+N+SS+AG   +    +Y ASK  +   TR+ AL   L    +R+N++ P  V
Sbjct: 125 GGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFV 184

Query: 189 MTQMGRTGWSDPAKAGP------MLAKTPLGRFA 216
            T +  +   +            +          
Sbjct: 185 NTAILESIEKEENMGQYIEYKDHIKDMIKYYGIL 218

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  118 bits (297), Expect = 6e-33
 Identities = 49/211 (23%), Positives = 89/211 (42%), Gaps = 20/211 (9%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV-- 79
           G+GR +V++     A +  L K+   L  L+     NV  +  D++     + A S+   
Sbjct: 16  GLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVA 75

Query: 80  --GPVDVLINNAAVARFDRFLDI----DEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
             G +D LI NA +  +   L        +   D +F +N+K  I+  +     ++  + 
Sbjct: 76  RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR- 134

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM- 192
            G+++   S AG     G  +Y+A+K A+  + R +A EL    +RVN V    + + + 
Sbjct: 135 -GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA-PYVRVNGVGSGGINSDLR 192

Query: 193 -------GRTGWSDPAKAGPMLAKTPLGRFA 216
                  G    S    A  + +  P+GR  
Sbjct: 193 GPSSLGMGSKAISTVPLADMLKSVLPIGRMP 223

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  117 bits (295), Expect = 7e-33
 Identities = 45/208 (21%), Positives = 79/208 (37%), Gaps = 22/208 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDL-QDWARTRAAV 76
           GIG     +L +       +     N  +L +        N+     D+    A ++  +
Sbjct: 16  GIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLL 75

Query: 77  SKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
            K+      VD+LIN A          I +++ I+    +N   ++N +  +       K
Sbjct: 76  KKIFDQLKTVDILINGAG---------ILDDHQIERTIAINFTGLVNTTTAILDFWDKRK 126

Query: 133 IQ--GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMT 190
               G I N+ S+ G  A+    +YSASKAA+ S T ++A       +   S+ P +  T
Sbjct: 127 GGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRT 186

Query: 191 QMGRTGWSDPAKAGPMLAKTPLGRFAGK 218
            +  T  S      P +A+  L      
Sbjct: 187 PLVHTFNSWLDVE-PRVAELLLSHPTQT 213

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  117 bits (294), Expect = 9e-33
 Identities = 62/207 (29%), Positives = 102/207 (49%), Gaps = 15/207 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK 78
           GIG  IVE+L+   A +   S+ +  LD      ++   NV+    DL         +  
Sbjct: 17  GIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQT 76

Query: 79  V-----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           V     G +++L+NNA V       D  E++  + I   N +A  ++SQ+    ++    
Sbjct: 77  VAHVFDGKLNILVNNAGVVIHKEAKDFTEKD-YNIIMGTNFEAAYHLSQIA-YPLLKASQ 134

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
            G+++ +SSIAG +AL   ++YSASK A++ +T+++A E    NIRVNSV P V++T + 
Sbjct: 135 NGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLV 194

Query: 194 RTGWSDPAKAGP----MLAKTPLGRFA 216
            T               + KTP+GR  
Sbjct: 195 ETAIKKNPHQKEEIDNFIVKTPMGRAG 221

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  111 bits (279), Expect = 1e-30
 Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 13/203 (6%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVS 77
           GIG+ I   L +    +++  +++    + + +          T   D+   A   A + 
Sbjct: 12  GIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMK 71

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                 G +DV++NNA + R    + + +    D + D+N+  V   +Q  +K M+  + 
Sbjct: 72  TAIDAWGTIDVVVNNAGITRDTLLIRMKKSQ-WDEVIDLNLTGVFLCTQAATKIMMKKR- 129

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           +G I+N++S+ G     G   Y+A+KA +   ++T A E    NI VN V P  + + M 
Sbjct: 130 KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT 189

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
                D  K   +L   PLGR  
Sbjct: 190 AKLGEDMEKK--ILGTIPLGRTG 210

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  107 bits (269), Expect = 3e-29
 Identities = 51/199 (25%), Positives = 95/199 (47%), Gaps = 9/199 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDL----QDWARTRAAVS 77
           GIGR I E L+   A +I  + ++    ++      N + + +++       +      +
Sbjct: 15  GIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRA 74

Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           + G VD+L+NNA + R +  + + +E   + I + N+ +V  +S+ V + M+  +  G I
Sbjct: 75  EFGEVDILVNNAGITRDNLLMRMKDEE-WNDIIETNLSSVFRLSKAVMRAMMKKR-HGRI 132

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           + + S+ G     G   Y+A+KA L   ++++A E+    I VN V P  + T M R   
Sbjct: 133 ITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALS 192

Query: 198 SDPAKAGPMLAKTPLGRFA 216
            D      +LA+ P GR  
Sbjct: 193 DDQRAG--ILAQVPAGRLG 209

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  108 bits (270), Expect = 4e-29
 Identities = 45/203 (22%), Positives = 98/203 (48%), Gaps = 10/203 (4%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQAN-----LDSLKQAFPNVQTVQVDLQD----WARTR 73
           G+G+ +  + +  +A ++   +++ +     L+ +K+       V+ D+          +
Sbjct: 18  GLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQ 77

Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +A+ + G +DV+INNA +       ++   +    + D N+      S+   K  +++ I
Sbjct: 78  SAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNK-VIDTNLTGAFLGSREAIKYFVENDI 136

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           +G+++N+SS+  K        Y+ASK  +  +T T+ALE  P  IRVN++ P  + T + 
Sbjct: 137 KGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPIN 196

Query: 194 RTGWSDPAKAGPMLAKTPLGRFA 216
              ++DP +   + +  P+G   
Sbjct: 197 AEKFADPEQRADVESMIPMGYIG 219

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  107 bits (268), Expect = 4e-29
 Identities = 47/194 (24%), Positives = 84/194 (43%), Gaps = 10/194 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           GIGR + + LSQ  A +   ++ +  L      +     V  DL+          KV  V
Sbjct: 15  GIGRAVADVLSQEGAEVTICARNEELLKRSGHRY-----VVCDLRKDLD--LLFEKVKEV 67

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D+L+ NA   +   F ++  E+      D     +I I +     M +    G IV ++S
Sbjct: 68  DILVLNAGGPKAGFFDELTNEDF-KEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITS 125

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK 202
            +  + +E     ++++ AL    +T++ E+ PY I VN V P    T+  +   S+  K
Sbjct: 126 FSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKK 185

Query: 203 AGPMLAKTPLGRFA 216
              + ++ P+ R A
Sbjct: 186 KQ-VESQIPMRRMA 198

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  107 bits (269), Expect = 5e-29
 Identities = 47/206 (22%), Positives = 87/206 (42%), Gaps = 13/206 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN---VQTVQVDLQDWARTRAAV--- 76
           GIG    +   ++ A ++       +   +     +   +  V  D+      R  V   
Sbjct: 17  GIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTT 76

Query: 77  -SKVGPVDVLINNAAVARFDRFLDID-EENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
            +K G +D++  N  V     +  ++        + D+N+     +++  ++ MI  K +
Sbjct: 77  IAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-K 135

Query: 135 GSIVNVSSIAGKTALEGH-TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
           GSIV  +SI+  TA EG   +Y+A+K A+  +T ++  ELG Y IRVN V P +V + + 
Sbjct: 136 GSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLL 195

Query: 194 RTGWSDPAKAGPMLAK---TPLGRFA 216
              +   +     LA       G   
Sbjct: 196 TDVFGVDSSRVEELAHQAANLKGTLL 221

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  107 bits (268), Expect = 5e-29
 Identities = 48/210 (22%), Positives = 84/210 (40%), Gaps = 17/210 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRA-- 74
           G+GR    +L+   A +  +  +   L++ K A         V T   D+ D A+  A  
Sbjct: 15  GLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYV 74

Query: 75  --AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
                + G +D   NNA +       +       D +  +N++ V    + V K M +  
Sbjct: 75  TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQ- 133

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G +VN +S+ G   +   + Y+A+K  +  +TR  A+E G Y IR+N++ P  + T M
Sbjct: 134 GSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM 193

Query: 193 GRTGWSDPAKAGP------MLAKTPLGRFA 216
                       P       +   P  R+ 
Sbjct: 194 VENSMKQLDPENPRKAAEEFIQVNPSKRYG 223

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  105 bits (264), Expect = 2e-28
 Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 19/200 (9%)

Query: 23  GIGRCIVEKLSQH-------EAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWAR 71
           GIGR I  + ++        E +++  S+T A+L+      +       T+  D+ D A 
Sbjct: 12  GIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMAD 71

Query: 72  TRA----AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKT 127
            R      V + G +D L+NNA V RF    D+ EE+  D   + N+K    ++Q +   
Sbjct: 72  VRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEED-FDYTMNTNLKGTFFLTQALFAL 130

Query: 128 MIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
           M      G I  ++S+A   A    +IY  SK     +  TM L     N+R+  VQP  
Sbjct: 131 MERQH-SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGA 189

Query: 188 VMTQMGRTGWSDPAKAGPML 207
           V T M   G  D      M+
Sbjct: 190 VYTPM--WGKVDDEMQALMM 207

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (265), Expect = 3e-28
 Identities = 35/209 (16%), Positives = 76/209 (36%), Gaps = 18/209 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---------PNVQTVQVDLQDWARTR 73
           GIG+ IV++L +  + ++  S+    L S                V  +Q ++++     
Sbjct: 23  GIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVN 82

Query: 74  AAVSKV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMI 129
             V       G ++ L+NN           I  +    ++ + N+     + + V  + +
Sbjct: 83  NLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKG-WHAVLETNLTGTFYMCKAVYSSWM 141

Query: 130 DHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVM 189
                  +  +                A++A + ++T+++ALE     IR+N V P V+ 
Sbjct: 142 KEHGGSIVNIIVPTKA--GFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIY 199

Query: 190 TQMGRTGWSDPAKAG--PMLAKTPLGRFA 216
           +Q     +    ++       K P  R  
Sbjct: 200 SQTAVENYGSWGQSFFEGSFQKIPAKRIG 228

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  104 bits (261), Expect = 1e-27
 Identities = 38/204 (18%), Positives = 86/204 (42%), Gaps = 11/204 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----NVQTVQVDLQDWARTRAA-- 75
           G+G+ +   LS   A  +  S+    L +  +         V  +Q D++D    +    
Sbjct: 36  GLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVS 95

Query: 76  --VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
             +   G  +++INNAA         +        I D+ +     ++  + K +I  + 
Sbjct: 96  ELIKVAGHPNIVINNAAGNFISPTERLSPNAWKT-ITDIVLNGTAFVTLEIGKQLIKAQK 154

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG 193
             + +++++I  +T        +++KA ++++++++A E G Y +R N +QP  + T+  
Sbjct: 155 GAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGA 214

Query: 194 RTGWSDPAKAG-PMLAKTPLGRFA 216
            +           M+ + P GR  
Sbjct: 215 FSRLDPTGTFEKEMIGRIPCGRLG 238

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  103 bits (258), Expect = 2e-27
 Identities = 35/205 (17%), Positives = 71/205 (34%), Gaps = 15/205 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
             G     +LS+    +    ++    D L+         Q+           +  V   
Sbjct: 11  FGGMGSALRLSEAGHTVACHDESFKQKDELEAF--AETYPQLKPMSEQEPAELIEAVTSA 68

Query: 80  -GPVDVLINNAAVA-RFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
            G VDVL++N   A  F        E+      +        +   V+  M   K    I
Sbjct: 69  YGQVDVLVSNDIFAPEFQPIDKYAVED-YRGAVEALQIRPFALVNAVASQMKKRKSG-HI 126

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           + ++S       +  + Y++++A   ++   ++ ELG YNI V ++ P  + ++     +
Sbjct: 127 IFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFY 186

Query: 198 ------SDPAKAGPMLAKTPLGRFA 216
                 ++P     +   T L R  
Sbjct: 187 PTEPWKTNPEHVAHVKKVTALQRLG 211

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  102 bits (256), Expect = 4e-27
 Identities = 45/214 (21%), Positives = 85/214 (39%), Gaps = 23/214 (10%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIGR I  +L +  A +++    +    +     LK+       +Q D+   +   A   
Sbjct: 17  GIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFD 76

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           K     G +D +++N+ +  +   L++ +E   D +F++N +    ++Q   K       
Sbjct: 77  KAVSHFGGLDFVMSNSGMEVWCDELEVTQEL-FDKVFNLNTRGQFFVAQQGLKHCRRGGR 135

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM- 192
                +++  A  T +  H +Y+ SKAA++   R  A++ G   + VN + P  V T M 
Sbjct: 136 IILTSSIA--AVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMF 193

Query: 193 ----------GRTGWSDPAKAGPMLAKTPLGRFA 216
                     G  G         +    PL R  
Sbjct: 194 DENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIG 227

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  102 bits (255), Expect = 6e-27
 Identities = 44/218 (20%), Positives = 88/218 (40%), Gaps = 15/218 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALS-----KTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIGR +  +L +    +I          +  + ++K+   +   V+ ++           
Sbjct: 29  GIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE 88

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +     G +D++ +N+ V  F    D+  E   D +F +N +    +++   K +     
Sbjct: 89  EAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE-FDRVFTINTRGQFFVAREAYKHLEIG-- 145

Query: 134 QGSIVNVSSIAGKTALEGHTIY-SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
            G ++ + SI G+          S SK A+++  R MA+++    I VN V P  + T M
Sbjct: 146 -GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM 204

Query: 193 GRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLP 230
                 +    G  L+   +  +A  ++  P  R  LP
Sbjct: 205 YHAVCREYIPNGENLSNEEVDEYA-AVQWSPLRRVGLP 241

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 1e-26
 Identities = 40/195 (20%), Positives = 74/195 (37%), Gaps = 14/195 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVS 77
           GIGR +   L++  A ++  ++++  L  +          +   +   ++D       V+
Sbjct: 25  GIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVA 84

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
           +     G +D+LI N            D  + +    +VN  + + ++      +     
Sbjct: 85  QAGKLMGGLDMLILNHITNTSLNLFHDDIHH-VRKSMEVNFLSYVVLTVAALPMLKQSN- 142

Query: 134 QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGP--YNIRVNSVQPTVVMTQ 191
            GSIV VSS+AGK A      YSASK ALD    ++  E      N+ +      ++ T+
Sbjct: 143 -GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE 201

Query: 192 MGRTGWSDPAKAGPM 206
                 S        
Sbjct: 202 TAMKAVSGIVHMQAA 216

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  100 bits (251), Expect = 2e-26
 Identities = 53/211 (25%), Positives = 87/211 (41%), Gaps = 17/211 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDW----ARTRA 74
           GIG  I  +L +    +   ++ +  L +    L++A         D++      A   A
Sbjct: 13  GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA 72

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
            V + GPVDVL+NNA         ++ +E  +D +            QV+    +  +  
Sbjct: 73  VVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGT 132

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G IVN++S  GK  +     YSASK  +   T+ + LEL    I VN+V P  V T M  
Sbjct: 133 GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAA 192

Query: 195 TGWSDPAKAGP---------MLAKTPLGRFA 216
           +     +             + A+ P+GR+ 
Sbjct: 193 SVREHYSDIWEVSTEEAFDRITARVPIGRYV 223

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  100 bits (251), Expect = 2e-26
 Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 12/202 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRA---- 74
           GIG+ I    +   A ++         +     ++Q        + D+       A    
Sbjct: 22  GIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF 81

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           A+SK+G VD+L+NNA      +  D+   +     +++N+ +  ++SQ+V+   ++    
Sbjct: 82  AISKLGKVDILVNNAGGGG-PKPFDMPMAD-FRRAYELNVFSFFHLSQLVAP-EMEKNGG 138

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G I+ ++S+A +      T Y++SKAA   + R MA +LG  NIRVN + P  ++T   +
Sbjct: 139 GVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK 198

Query: 195 TGWSDPAKAGPMLAKTPLGRFA 216
           +  +   +   ML  TP+ R  
Sbjct: 199 SVITPEIEQK-MLQHTPIRRLG 219

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 99.9 bits (248), Expect = 3e-26
 Identities = 43/206 (20%), Positives = 84/206 (40%), Gaps = 22/206 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           G+GR     L      ++ L         L++   ++  V+ D+      R AV++    
Sbjct: 12  GLGRAAALALKARGYRVVVLD--------LRREGEDLIYVEGDVTREEDVRRAVARAQEE 63

Query: 83  DVL---INNAAVARFDRFLDIDEEN---LIDSIFDVNIKAVINISQVVSKTMIDH----- 131
             L   ++ A V   ++ L  +  +       + +VN+    N+ ++ +  M ++     
Sbjct: 64  APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAE 123

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
             +G IVN +S+A      G   Y+ASK  + ++T   A EL  + IRV +V P +  T 
Sbjct: 124 GQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTP 183

Query: 192 MGRTGWSDPAKAGPMLAKTPL-GRFA 216
           + +        +  + A+ P   R  
Sbjct: 184 LLQGLPEKAKAS--LAAQVPFPPRLG 207

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  100 bits (249), Expect = 4e-26
 Identities = 46/216 (21%), Positives = 82/216 (37%), Gaps = 23/216 (10%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLD----SLKQAFPNVQTVQVDLQD----WARTRA 74
            IG     +L++    I  L   +  L+    S+++     ++   D+           +
Sbjct: 16  NIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDS 75

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
            V   G +D L NNA        +     +    +  +N+    ++ + VS+  +  +  
Sbjct: 76  VVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSR-QMITQNY 134

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G IVN +S+AG         Y  SK A+ ++T T AL+L PYNIRVN++ P  +      
Sbjct: 135 GRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMW 194

Query: 195 T--------------GWSDPAKAGPMLAKTPLGRFA 216
                                 A  M+   P+ R+ 
Sbjct: 195 ERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYG 230

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 98.6 bits (245), Expect = 1e-25
 Identities = 40/199 (20%), Positives = 77/199 (38%), Gaps = 12/199 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRA----AVS 77
           GIGR  ++  ++  A ++A+ + +  L     A       V  D+ D     A    A+ 
Sbjct: 16  GIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALE 75

Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           + G +  + + A VA      ++  E   + +  VN+     +++   + + +       
Sbjct: 76  EFGRLHGVAHFAGVAHSALSWNLPLEA-WEKVLRVNLTGSFLVARKAGEVLEEGGSLVLT 134

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
                        G   Y+A K  +  + RT+ALEL    +RVN + P ++ T M     
Sbjct: 135 ----GSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLP 190

Query: 198 SDPAKAGPMLAKTPLGRFA 216
               +    +  +PLGR  
Sbjct: 191 PWAWEQ--EVGASPLGRAG 207

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.2 bits (246), Expect = 2e-25
 Identities = 40/209 (19%), Positives = 81/209 (38%), Gaps = 12/209 (5%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----------LKQAFPNVQTVQVDLQDW-AR 71
           GIG  +  +L+   +    +  T  +L +          L     +++T+Q+D++D  + 
Sbjct: 13  GIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSV 72

Query: 72  TRAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH 131
             A          ++   A       L+   E+ + S+ DVN+   + + Q     M   
Sbjct: 73  AAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRR 132

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
              G ++   S+ G   L  + +Y ASK AL+ +  ++A+ L P+ + ++ ++   V T 
Sbjct: 133 G-SGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191

Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFAGKLK 220
                   P +           RF   L 
Sbjct: 192 FMEKVLGSPEEVLDRTDIHTFHRFYQYLA 220

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.0 bits (243), Expect = 3e-25
 Identities = 53/266 (19%), Positives = 89/266 (33%), Gaps = 68/266 (25%)

Query: 23  GIGRCIVEKLSQHEAIIIAL-----SKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS 77
           GIG  IV  L +  +  + L     ++ QA +  L+    + +  Q+D+ D    RA   
Sbjct: 14  GIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRD 73

Query: 78  KV----GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
            +    G +DVL+NNA +A                    N     ++   +   +   K 
Sbjct: 74  FLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEV-TMKTNFFGTRDVCTELLPLI---KP 129

Query: 134 QGSIVNVSSIAGKTALEGHTI--------------------------------------- 154
           QG +VNVSSI    AL+  +                                        
Sbjct: 130 QGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPS 189

Query: 155 --YSASKAALDSITRTMALELGPY----NIRVNSVQPTVVMTQMGRTGWSDPAKAG---- 204
             Y  +K  +  ++R  A +L        I +N+  P  V T M     +   + G    
Sbjct: 190 SAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGAETP 249

Query: 205 ------PMLAKTPLGRFAGKLKPKPW 224
                 P  A+ P G+F  + + + W
Sbjct: 250 VYLALLPPDAEGPHGQFVSEKRVEQW 275

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 96.7 bits (240), Expect = 5e-25
 Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 14/199 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRA----AVS 77
           G+G   V  +    A ++          ++        + V +D+   A+ +A    AV+
Sbjct: 17  GMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVT 76

Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
             G + VL+NNA +       D         I DVN+  V    + V K M +   +GSI
Sbjct: 77  AFGGLHVLVNNAGILNIGTIEDYALTEWQR-ILDVNLTGVFLGIRAVVKPMKE-AGRGSI 134

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW 197
           +N+SSI G         Y+A+K A+  +T++ ALELGP  IRVNS+ P +V T M     
Sbjct: 135 INISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT---- 190

Query: 198 SDPAKAGPMLAKTPLGRFA 216
                    + +T LGR A
Sbjct: 191 ---DWVPEDIFQTALGRAA 206

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 95.7 bits (237), Expect = 1e-24
 Identities = 23/180 (12%), Positives = 49/180 (27%), Gaps = 5/180 (2%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
            +G   V+        + ++   +    S         +              +     V
Sbjct: 13  ALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKV 72

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D ++  A                 D ++  +I      S +        K  G +    +
Sbjct: 73  DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLA---TKHLKEGGLLTLAGA 129

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELG--PYNIRVNSVQPTVVMTQMGRTGWSDP 200
            A      G   Y  +K A+  + +++A +    P      +V P  + T M R    + 
Sbjct: 130 KAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA 189

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 96.1 bits (238), Expect = 1e-24
 Identities = 35/204 (17%), Positives = 76/204 (37%), Gaps = 13/204 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ------AFPNVQTVQVDLQDWARTRAA- 75
            +G  I  KL +  A +    + +      ++           +      ++     A  
Sbjct: 21  SLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGV 80

Query: 76  VSKVGPVDVLINNAAVARFDRFLDIDEENL---IDSIFDVNIKAVINISQVVSKTMIDHK 132
               G +D L++  A A  +       +          +V+  +++ +++     + +  
Sbjct: 81  KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE-- 138

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G IV ++  A +  +  + + + +KAAL++  R +A ELGP  +RVN++    V T  
Sbjct: 139 -GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVA 197

Query: 193 GRTGWSDPAKAGPMLAKTPLGRFA 216
            R+          +    PL R  
Sbjct: 198 ARSIPGFTKMYDRVAQTAPLRRNI 221

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 95.7 bits (237), Expect = 2e-24
 Identities = 52/237 (21%), Positives = 90/237 (37%), Gaps = 35/237 (14%)

Query: 23  GIGRCIVEKLSQHEAI--IIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV 79
           GIG  +V++L + + I  IIA ++       LK      V  + + +         VSKV
Sbjct: 14  GIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKV 73

Query: 80  ------GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
                   + +LINNA V             +I    DVN  +V+ ++Q +   + +   
Sbjct: 74  GEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAAS 133

Query: 134 QGSIV-----------------NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPY 176
           + S                   +++     +A      Y  SKAA++   RT+A++L   
Sbjct: 134 KESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDD 193

Query: 177 NIRVNSVQPTVVMTQM-GRTGWSDPAKAGPMLAK-------TPLGRF-AGKLKPKPW 224
           N+ V +  P  V T + G+       ++   L         +  GRF    LKP  +
Sbjct: 194 NVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYEF 250

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 92.6 bits (229), Expect = 1e-23
 Identities = 26/180 (14%), Positives = 57/180 (31%), Gaps = 5/180 (2%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
            +G  I+E   ++   ++ +  +  +           +      Q      A+  +   V
Sbjct: 13  ALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQV 72

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
           D +   A           D     D +   ++ +    ++         K  G +    +
Sbjct: 73  DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAK---LATTHLKPGGLLQLTGA 129

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELG--PYNIRVNSVQPTVVMTQMGRTGWSDP 200
            A          Y  +KAA+  +T ++A +    P N  V ++ P  + T M R    + 
Sbjct: 130 AAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNA 189

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 93.3 bits (231), Expect = 2e-23
 Identities = 41/217 (18%), Positives = 87/217 (40%), Gaps = 25/217 (11%)

Query: 23  GIGRCIVEKLSQHE---AIIIALSKTQANLDSLKQAFP------NVQTVQVDLQDWARTR 73
           G GR +  +L++     ++++  +++++ L  LK+          V     DL   A  +
Sbjct: 17  GFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQ 76

Query: 74  AAV--------SKVGPVDVLINNAAVARFDRFLDIDEENL--IDSIFDVNIKAVINISQV 123
             +         +     +LINNAA         ++  +L  +++ + +N+ +++ ++  
Sbjct: 77  RLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSG 136

Query: 124 VSKTMIDHKI-QGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNS 182
                 D      ++VN+SS+      +G  +Y A KAA D + + +A E    ++RV S
Sbjct: 137 TLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLS 194

Query: 183 VQPTVVMTQMGRT---GWSDPAKAGPMLAKTPLGRFA 216
             P  +   M +       DP     +      G   
Sbjct: 195 YAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALV 231

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 92.1 bits (228), Expect = 3e-23
 Identities = 48/198 (24%), Positives = 86/198 (43%), Gaps = 15/198 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG  I ++L+     +    +              +  V+VD+ D      A + V   
Sbjct: 18  GIGLAIAQRLAADGHKVAVTHRGSGAPK-------GLFGVEVDVTDSDAVDRAFTAVEEH 70

Query: 80  -GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIV 138
            GPV+VL++NA ++     + + EE   + + + N+     ++Q  S++M  +K  G ++
Sbjct: 71  QGPVEVLVSNAGLSADAFLMRMTEEK-FEKVINANLTGAFRVAQRASRSMQRNK-FGRMI 128

Query: 139 NVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS 198
            + S++G   +     Y+ASKA +  + R++A EL   N+  N V P  + T M  T   
Sbjct: 129 FIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDM--TRAL 186

Query: 199 DPAKAGPMLAKTPLGRFA 216
           D       L   P  R  
Sbjct: 187 DERIQQGALQFIPAKRVG 204

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 91.8 bits (227), Expect = 4e-23
 Identities = 56/211 (26%), Positives = 89/211 (42%), Gaps = 18/211 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDS----LKQAFPNVQTVQVDLQDWARTRA---- 74
           GIG+ I  +L +    +       A   +    + QA  +   V+VD+ D  +  A    
Sbjct: 12  GIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQ 71

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
           A   +G  DV++NNA VA       I    ++D ++++N+K VI   Q   +        
Sbjct: 72  ARKTLGGFDVIVNNAGVAPSTPIESITP-EIVDKVYNINVKGVIWGIQAAVEAFKKEGHG 130

Query: 135 GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR 194
           G I+N  S AG        +YS+SK A+  +T+T A +L P  I VN   P +V T M  
Sbjct: 131 GKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA 190

Query: 195 TGWSDPAKAGP---------MLAKTPLGRFA 216
                 ++A              +  LGR +
Sbjct: 191 EIDRQVSEAAGKPLGYGTAEFAKRITLGRLS 221

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 89.6 bits (221), Expect = 4e-22
 Identities = 46/224 (20%), Positives = 77/224 (34%), Gaps = 32/224 (14%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANL------DSLKQAFPNVQTVQVDLQDWARTRAAV 76
            IG  I  +L Q    ++   +           +       +    + DL   +      
Sbjct: 12  RIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCC 71

Query: 77  SKV--------GPVDVLINNAAVARFDRFLDIDEENLID----------SIFDVNIKAVI 118
             +        G  DVL+NNA+       L  D+ N              +F  N  A +
Sbjct: 72  EDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPL 131

Query: 119 NISQVVSKTMID----HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELG 174
            + +  ++   +         S+VN+        L G  +Y+ +K AL  +TR  ALEL 
Sbjct: 132 FLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELA 191

Query: 175 PYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGK 218
           P +IRVN+V P + +        +          K PLG+    
Sbjct: 192 PRHIRVNAVAPGLSLLPPAMPQETQEE----YRRKVPLGQSEAS 231

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 89.1 bits (220), Expect = 6e-22
 Identities = 52/208 (25%), Positives = 89/208 (42%), Gaps = 15/208 (7%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWA----RTRAAVS 77
           GIGR   E   +  A +           +      P    + +D+ D A         + 
Sbjct: 16  GIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLD 75

Query: 78  KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSI 137
           + G +D+L+NNAA+      ++I  E+  D +F +N+   + + Q V++ MI     G I
Sbjct: 76  RWGSIDILVNNAALFDLAPIVEITRES-YDRLFAINVSGTLFMMQAVARAMIAGGRGGKI 134

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM----- 192
           +N++S AG+       +Y A+KAA+ S+T++  L L  + I VN++ P VV  +      
Sbjct: 135 INMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVD 194

Query: 193 ----GRTGWSDPAKAGPMLAKTPLGRFA 216
                        K   + A  P GR  
Sbjct: 195 AKFADYENLPRGEKKRQVGAAVPFGRMG 222

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 88.7 bits (219), Expect = 7e-22
 Identities = 51/214 (23%), Positives = 82/214 (38%), Gaps = 22/214 (10%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRA-- 74
           GIG  I   L+   A I++      A ++ ++          V     DL      R   
Sbjct: 15  GIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLV 74

Query: 75  --AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
             AV ++G +D+L+NNA +       D   E   D+I  +N+ AV + +      M    
Sbjct: 75  DNAVRQMGRIDILVNNAGIQHTALIEDFPTEK-WDAILALNLSAVFHGTAAALPHMKKQG 133

Query: 133 IQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM 192
             G I+N++S  G  A    + Y A+K  +   T+  ALE     I  N++ P  V T +
Sbjct: 134 -FGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPL 192

Query: 193 GRTGWSDPAKAGP----------MLAKTPLGRFA 216
                S  A+             +  K P  +F 
Sbjct: 193 VEKQISALAEKNGVDQETAARELLSEKQPSLQFV 226

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.5 bits (213), Expect = 4e-21
 Identities = 37/210 (17%), Positives = 71/210 (33%), Gaps = 18/210 (8%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
           G+G    E+L    A  + L    +  ++  +   N            +       +   
Sbjct: 16  GLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKG 75

Query: 83  D----------VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK 132
                        I  A+     +            + DVN+    N+ ++V+  M  ++
Sbjct: 76  KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNE 135

Query: 133 IQ-----GSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTV 187
                  G I+N +S+A      G   YSASK  +  +T  +A +L P  IRV ++ P +
Sbjct: 136 PDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGL 195

Query: 188 VMTQMGRTGWSDPAKAGPMLAKTPL-GRFA 216
             T +  +          + ++ P   R  
Sbjct: 196 FGTPLLTSLPEKVCNF--LASQVPFPSRLG 223

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 86.5 bits (213), Expect = 5e-21
 Identities = 28/205 (13%), Positives = 72/205 (35%), Gaps = 14/205 (6%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
            I   I + + +  A +    +       +++    + +  V   D A   +  +     
Sbjct: 18  SIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAEL 77

Query: 80  ----GPVDVLINNAAVARFDRFLDIDEENLI----DSIFDVNIKAVINISQVVSKTMIDH 131
                  D  +++   A  D+        +         D++  + + +++     +   
Sbjct: 78  GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPG 137

Query: 132 KIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQ 191
               +++ +S +  + A+  + +   +KA+L++  R MA  +GP  +RVN++    + T 
Sbjct: 138 S---ALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTL 194

Query: 192 MGRTGWSDPAKAGPMLAKTPLGRFA 216
                           A TP+ R  
Sbjct: 195 AASGIKDFRKMLAHCEAVTPIRRTV 219

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 71.8 bits (175), Expect = 4e-16
 Identities = 18/156 (11%), Positives = 40/156 (25%), Gaps = 6/156 (3%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV 82
            +G      L+   A ++   +      +   +      V V   + A   +    V   
Sbjct: 34  PVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGA 93

Query: 83  DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS 142
             +    A+        + +     +   + I A  N    +    ID   +G       
Sbjct: 94  HFVFTAGAIG----LELLPQAAW-QNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKR 148

Query: 143 IAGKTALEGHTIYSASKAALDSITRTMALELGPYNI 178
             G   + G       +A +  +  +         I
Sbjct: 149 AFGALGI-GGLKLKLHRACIAKLFESSEGVFDAEEI 183

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 72.4 bits (176), Expect = 6e-16
 Identities = 43/213 (20%), Positives = 83/213 (38%), Gaps = 27/213 (12%)

Query: 23  GIGRCIVEKL---SQHEAIIIALSKTQANLDSLKQ---AFPNVQTVQVDLQDWARTRA-- 74
           G+G  +V+ L    Q    +    + +     L+       N+  +++DL+++       
Sbjct: 13  GLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLV 72

Query: 75  ----AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMI- 129
                V+K   ++VL NNA +A     +       +      N    I +++     +  
Sbjct: 73  ADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKK 132

Query: 130 ---------DHKIQGSIVNVSSIAGKTALE---GHTIYSASKAALDSITRTMALELGPYN 177
                        + +I+N+SSI G        G   Y  SK+AL++ T++++++L P  
Sbjct: 133 AAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQR 192

Query: 178 IRVNSVQPTVVMTQMGR--TGWSDPAKAGPMLA 208
           I   S+ P  V T MG        P   G ++ 
Sbjct: 193 IMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQ 225

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 68.0 bits (165), Expect = 3e-14
 Identities = 39/227 (17%), Positives = 65/227 (28%), Gaps = 54/227 (23%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--- 79
           GIG    + L      I+ +    A              V  DL      + A++ V   
Sbjct: 12  GIGAATRKVLEAAGHQIVGIDIRDAE-------------VIADLSTAEGRKQAIADVLAK 58

Query: 80  --GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI---- 133
               +D L+  A +    + L         ++  VN      +       +         
Sbjct: 59  CSKGMDGLVLCAGLGPQTKVLG--------NVVSVNYFGATELMDAFLPALKKGHQPAAV 110

Query: 134 ----------------------QGSIVNVSSIAGKTALEGHTI-YSASKAALDSITRTMA 170
                                  G      +I      +G  + Y+ SK AL    R  A
Sbjct: 111 VISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRA 170

Query: 171 LELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAK-TPLGRFA 216
              G   +R+N++ P    T + + G  DP     +     P+GR A
Sbjct: 171 AAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRA 217

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 57.0 bits (136), Expect = 2e-10
 Identities = 28/201 (13%), Positives = 70/201 (34%), Gaps = 7/201 (3%)

Query: 23  GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ-------AFPNVQTVQVDLQDWARTRAA 75
            I   I +      A +      ++    ++         +     V  +    +   + 
Sbjct: 18  SIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSV 77

Query: 76  VSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQG 135
              +G +D ++++ A A  +       E    +       +V ++ ++ +          
Sbjct: 78  KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGA 137

Query: 136 SIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT 195
           S++ +S +     +  + +   +KAAL+S  R +A++LG ++IRVN++    + T     
Sbjct: 138 SVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSG 197

Query: 196 GWSDPAKAGPMLAKTPLGRFA 216
                          PL +  
Sbjct: 198 IADFRMILKWNEINAPLRKNV 218

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 42.5 bits (99), Expect = 2e-05
 Identities = 27/185 (14%), Positives = 55/185 (29%), Gaps = 31/185 (16%)

Query: 24  IGRCIVEKLSQ--HEAIIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRA 74
            G  + E L +  +E   I    +  N + +   +       P       DL D +    
Sbjct: 13  DGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTR 72

Query: 75  AVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQ 134
            + +V P D + N  A++      +  E        DV+    + + + +    ++ K +
Sbjct: 73  ILREVQP-DEVYNLGAMSHVAVSFESPEY-----TADVDAMGTLRLLEAIRFLGLEKKTR 126

Query: 135 GSIVNVSSIA--GK---------TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSV 183
                 S+    G          T     + Y+ +K     IT         Y +   + 
Sbjct: 127 --FYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRES---YGMYACNG 181

Query: 184 QPTVV 188
                
Sbjct: 182 ILFNH 186

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 40.5 bits (94), Expect = 8e-05
 Identities = 36/195 (18%), Positives = 61/195 (31%), Gaps = 39/195 (20%)

Query: 24  IGRCIVEKLSQ--HEAIIIALSKTQA-NLDSLKQAF--PNVQTVQVDLQDWARTRAAVSK 78
           IG  +V  + +   + ++     T A NL+SL              D+ D A       +
Sbjct: 12  IGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQ 71

Query: 79  VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMI----DHKIQ 134
             P D +++ AA +  DR +            + NI     + +V  K       D K  
Sbjct: 72  YQP-DAVMHLAAESHVDRSITGPAA-----FIETNIVGTYALLEVARKYWSALGEDKKNN 125

Query: 135 GSIVNVSSIA---------------------GKTALEGHTIYSASKAALDSITRTMALEL 173
               ++S+                         TA    + YSASKA+ D + R      
Sbjct: 126 FRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRT- 184

Query: 174 GPYNIRVNSVQPTVV 188
             Y +       +  
Sbjct: 185 --YGLPTIVTNCSNN 197

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 22/179 (12%), Positives = 47/179 (26%), Gaps = 9/179 (5%)

Query: 23  GIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQ---AFPNVQTVQVDLQDWARTRAAVSK 78
           G+G  I   L++  A  ++ +S++  + D   +       +             R +V +
Sbjct: 20  GVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRE 79

Query: 79  VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDV-NIKAVINISQVVSKTMIDHKIQGSI 137
           +          +          D      +   +        +       +       + 
Sbjct: 80  LLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAF 139

Query: 138 VNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG 196
           V  SS A      G   Y+   A LD     +A +     +   +V            G
Sbjct: 140 VLFSSFASAFGAPGLGGYAPGNAYLDG----LAQQRRSDGLPATAVAWGTWAGSGMAEG 194

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 25/184 (13%), Positives = 54/184 (29%), Gaps = 28/184 (15%)

Query: 24  IGRCIVEKLSQHEAIIIALSK-----TQANLDSLKQA-----FPNVQTVQVDLQDWARTR 73
            G  + E L +    +  + +         ++ L +        N++    DL D     
Sbjct: 13  DGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLV 72

Query: 74  AAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI 133
             +++V P ++    A       F   +         DV+    + +   V    + + +
Sbjct: 73  KIINEVKPTEIYNLGAQSHVKISFDLAEY------TADVDGVGTLRLLDAVKTCGLINSV 126

Query: 134 QGSIVNVSSIAGK---------TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQ 184
           +    + S + GK         T     + Y A+K     I          YN+   +  
Sbjct: 127 KFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREA---YNLFAVNGI 183

Query: 185 PTVV 188
               
Sbjct: 184 LFNH 187

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	238
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.78
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.73
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.7
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.7
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.67
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.67
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.67
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.67
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.66
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.66
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.61
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.6
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.59
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.57
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.56
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.55
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.55
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.54
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.54
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.52
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.51
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.5
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.49
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.38
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.26
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.24
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.22
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.08
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.04
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.98
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.98
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.78
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.22
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.1
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.02
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.01
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.97
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.88
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.83
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.82
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.78
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.77
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.76
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.74
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.71
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.69
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.64
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.62
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.53
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.5
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.45
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.44
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.38
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.38
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.37
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.37
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.37
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.32
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.25
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.25
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.22
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.16
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.15
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.1
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.05
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.03
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.97
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.94
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.89
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.87
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.87
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.78
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.77
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.76
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.75
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.73
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.7
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.65
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.63
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.6
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.53
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.45
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.4
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.39
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.32
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	96.25
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.2
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.18
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.17
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.11
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.09
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.03
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.94
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.92
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.88
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.84
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	95.77
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.77
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	95.66
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.59
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.52
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.47
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.39
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.2
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.19
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.67
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.65
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.47
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	94.29
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.23
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	94.18
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	93.9
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.74
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	93.59
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	93.48
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	93.37
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	93.04
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	92.55
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	92.28
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	92.25
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	92.24
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	92.24
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	92.14
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	92.13
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.11
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	91.88
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	91.79
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	91.66
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	91.55
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	91.28
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	91.09
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	91.09
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	91.08
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	90.84
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	90.66
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	90.54
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	90.51
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	90.48
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	90.28
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	90.03
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	89.92
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	89.79
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	89.64
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	89.22
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	88.92
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	88.82
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	88.45
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	88.33
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	88.26
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	87.69
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	87.47
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	87.4
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	87.35
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	87.03
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	86.36
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	86.16
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	85.98
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	85.1
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	85.06
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	84.64
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	84.02
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	83.84
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	83.78
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	83.57
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	82.96
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	82.23
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	81.98
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	81.38
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	81.12
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	80.62
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	80.29

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-53  Score=336.91  Aligned_cols=222  Identities=45%  Similarity=0.690  Sum_probs=207.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|++++++++.++.+++..+++|++|+++++++++++|++|++||||
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnA   84 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecc
Confidence            35578899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHH
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTM  169 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l  169 (238)
                      |+....++.+.+.++ |++.+++|+.++++++++++|.+.++...|+||++||..+..+.++...|++||+|+.+|+|++
T Consensus        85 g~~~~~~~~~~~~~~-~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~l  163 (244)
T d1pr9a_          85 AVALLQPFLEVTKEA-FDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVM  163 (244)
T ss_dssp             CCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchhhhhHHH-HHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHHHHHH
Confidence            999888999999998 9999999999999999999998766544799999999999999999999999999999999999


Q ss_pred             HHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        170 ALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       170 ~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.|++++|||||+|+||+++|+|.+..+..++..+....+.|++|+++|+|+|+++.||+|+.
T Consensus       164 A~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~  226 (244)
T d1pr9a_         164 ALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDR  226 (244)
T ss_dssp             HHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999998876666666667778899999999999999999999984

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-53  Score=337.88  Aligned_cols=221  Identities=38%  Similarity=0.582  Sum_probs=207.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.++++||||++|||+++|++|+++|++|++++|++++++++.++.+++..+.+|++|+++++++++++|++|++|||||
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg   83 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence            45788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHH
Q psy14567         91 VARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMA  170 (238)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~  170 (238)
                      +....++.+.+.++ |++.+++|+.+++++++++.|.+.+++.+|+||+++|..+..+.++..+|+++|+|+.+|+|+++
T Consensus        84 ~~~~~~~~~~~~~~-~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA  162 (242)
T d1cyda_          84 LVIMQPFLEVTKEA-FDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMA  162 (242)
T ss_dssp             CCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHH
T ss_pred             cccchhHHHHHHHH-HHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHHHHHH
Confidence            99888999999998 99999999999999999999987766547999999999999999999999999999999999999


Q ss_pred             HHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        171 LELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       171 ~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .|++++|||||+|+||+++|+|.+.....++..+.+....|++|+++|+|+|+++.||+|+.
T Consensus       163 ~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~  224 (242)
T d1cyda_         163 MELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDR  224 (242)
T ss_dssp             HHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999998776666677777888899999999999999999999984

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-52  Score=333.01  Aligned_cols=227  Identities=23%  Similarity=0.308  Sum_probs=201.9

Q ss_pred             CeeeeeeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHH
Q psy14567          1 MFIFAKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAV   76 (238)
Q Consensus         1 ~~~~~~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~   76 (238)
                      ||...+|+ .+.++++||||++|||+++|++|+++|++|++++|++++++++.++    .+++..+++|+++++++++++
T Consensus         1 m~~~d~m~-L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~   79 (255)
T d1fmca_           1 MFNSDNLR-LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALA   79 (255)
T ss_dssp             CCCGGGGC-CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCC-CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHH
Confidence            66666553 4678999999999999999999999999999999999887765443    457889999999999998877


Q ss_pred             Hh----cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCC
Q psy14567         77 SK----VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGH  152 (238)
Q Consensus        77 ~~----~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  152 (238)
                      ++    +|++|++|||||+....++ +.+.++ |++++++|+.++++++++++|+|.+++ +|+||++||..+..+.++.
T Consensus        80 ~~~~~~~g~iDilvnnAG~~~~~~~-e~~~e~-~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~~~~  156 (255)
T d1fmca_          80 DFAISKLGKVDILVNNAGGGGPKPF-DMPMAD-FRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINM  156 (255)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCT-TCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTC
T ss_pred             HHHHHHcCCCCEeeeCCcCCCCCcc-cCCHHH-HHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhcccccc
Confidence            54    4999999999998876655 788887 999999999999999999999999887 7899999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .+|++||+|+.+|+|+++.|++++|||||+|+||+++|++.+..+ .++..+.+.+.+|++|+++|+|+|+++.||+|+.
T Consensus       157 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~  235 (255)
T d1fmca_         157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPA  235 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGG
T ss_pred             ccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999999999999987654 3455566778899999999999999999999974

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.5e-52  Score=332.31  Aligned_cols=221  Identities=22%  Similarity=0.309  Sum_probs=198.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh-----CCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA-----FPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+++++..++     ..++..+++|+++++++++++++    +|
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   82 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3567889999999999999999999999999999999887655433     24678899999999999888755    58


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-cCCCCchhhHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-ALEGHTIYSASK  159 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~~~y~~sK  159 (238)
                      ++|++|||||+....++.+.+.++ |++.+++|+.++++++++++|+|++++ .|+||+++|..+.. +.++..+|+++|
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~e~-~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~~~~~~~~Y~asK  160 (251)
T d1vl8a_          83 KLDTVVNAAGINRRHPAEEFPLDE-FRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTMPNISAYAASK  160 (251)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred             CCCEEEECCCCCCCCChhhCCHHH-HHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhccccCccccchHHHH
Confidence            999999999998888999999998 999999999999999999999999887 79999999987644 677889999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+.+|+|+++.|++++|||||+|+||+++|+|.+.....++..+.+.+.+|++|+++|+|+|++++||+|+.
T Consensus       161 aal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~  233 (251)
T d1vl8a_         161 GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEE  233 (251)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGG
T ss_pred             HhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999998766556666677788899999999999999999999985

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.1e-52  Score=332.79  Aligned_cols=218  Identities=25%  Similarity=0.414  Sum_probs=199.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      +.+|++||||++|||+++|++|+++|++|++++|+++.++++.++.+ +...+++|+++++++++++++    +|++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            56788999999999999999999999999999999999998877654 578899999999999887754    5899999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||.....++.+.+.++ |++.+++|+.++++++++++|+|.+++ .|+||++||..+..+.++..+|++||+|+.+|
T Consensus        83 VnnAg~~~~~~~~~~~~~~-~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asKaal~~l  160 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEE-WNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMGNGGQANYAAAKAGLIGF  160 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             hhhhhhccccccccccccc-cccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCCCCCCHHHHHHHHHHHHH
Confidence            9999999888999999998 999999999999999999999999887 79999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+++.|++++|||||+|+||+++|+|.+...  ++..+......|++|+++|+|+|+++.||+|+.
T Consensus       161 t~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~--~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~  225 (243)
T d1q7ba_         161 SKSLAREVASRGITVNVVAPGFIETDMTRALS--DDQRAGILAQVPAGRLGGAQEIANAVAFLASDE  225 (243)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC--HHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHhCccCeEEEEEecceEechhhhhhh--hhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999987642  334455667889999999999999999999974

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.6e-51  Score=327.01  Aligned_cols=221  Identities=22%  Similarity=0.221  Sum_probs=184.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-HHH-HHhhCCCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-LDS-LKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~-~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      .+.+|++||||++|||+++|+.|+++|++|++++|++++ .++ +.+...++..+++|++|++++++++++    +|++|
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   82 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   82 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            456788999999999999999999999999999998643 333 344445688999999999999887754    59999


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||+....++.+.+.++ |++++++|+.++++++++++|.|++++ .|+||++||..+..+.++..+|++||+|+.
T Consensus        83 ilVnnAG~~~~~~~~~~~~e~-~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  160 (247)
T d2ew8a1          83 ILVNNAGIYPLIPFDELTFEQ-WKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYISTKAANI  160 (247)
T ss_dssp             EEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCSSCHHHHHHHHHHH
T ss_pred             EEEECCCCCCCCChHhCCHHH-hhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcccCcccccchhhhccHH
Confidence            999999999888999999998 999999999999999999999999887 799999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+|+++.|++++|||||+|+||+++|+|.+................|++|+++|+|+|+++.||+|+.
T Consensus       161 ~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~  229 (247)
T d2ew8a1         161 GFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDD  229 (247)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999998765444333333444569999999999999999999974

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.8e-51  Score=325.53  Aligned_cols=213  Identities=28%  Similarity=0.324  Sum_probs=195.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      +.++++||||++|||+++|++|+++|++|++++|++++++++.++++ ...++++|++|++++++++++    +|++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil   84 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence            56788999999999999999999999999999999999999888774 478899999999999888755    4899999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||+....++.+.+.++ |++++++|+.+++++++++.|.|.+++ .|+||++||..+..+.++..+|+++|+|+.+|
T Consensus        85 innAG~~~~~~~~~~~~~~-~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  162 (244)
T d1nffa_          85 VNNAGILNIGTIEDYALTE-WQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYTATKFAVRGL  162 (244)
T ss_dssp             EECCCCCCCBCTTTSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EECCcccCCCchhhCCHHH-HhHHhhcccchhhHHHHHHHhHHHhcC-cceEEeccccccccccccccchhhHHHHHHHH
Confidence            9999999888999999998 999999999999999999999999887 79999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+++.|++++|||||+|+||+++|+|.....       ....+.|++|+++|+|+|+++.||+|+.
T Consensus       163 tk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-------~~~~~~pl~R~~~p~diA~~v~fL~s~~  222 (244)
T d1nffa_         163 TKSTALELGPSGIRVNSIHPGLVKTPMTDWVP-------EDIFQTALGRAAEPVEVSNLVVYLASDE  222 (244)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC-------TTCSCCSSSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHhcccCEEEEEEeeCCccChhHhhhh-------HHHHhccccCCCCHHHHHHHHHHHhChh
Confidence            99999999999999999999999999975421       1234579999999999999999999974

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=3.2e-52  Score=331.83  Aligned_cols=223  Identities=26%  Similarity=0.371  Sum_probs=198.1

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHh----
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK----   78 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~----   78 (238)
                      +-....+|++||||++|||+++|++|+++|++|++++|+++.++++.+++    .++..+++|++|++++++++++    
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            34456789999999999999999999999999999999998877665443    4688999999999999888755    


Q ss_pred             cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHH
Q psy14567         79 VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      +|++|++|||||.....++.+.+.++ |++++++|+.++++++++++|.|.+++ .|+||++||..+..+.++..+|++|
T Consensus        85 ~g~iDilvnnag~~~~~~~~~~~~~~-~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~~~~Y~as  162 (251)
T d2c07a1          85 HKNVDILVNNAGITRDNLFLRMKNDE-WEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSSS  162 (251)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTCCHHH-HHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             cCCceeeeeccccccccccccccHHH-HhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCCCCCHHHHHH
Confidence            49999999999999888888999888 999999999999999999999999887 7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        159 KAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       159 K~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      |+|+.+|+|+++.|++++|||||+|+||+++|+|....  .++..+.+....|++|+++|+|+|+++.||+|+..
T Consensus       163 Kaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s  235 (251)
T d2c07a1         163 KAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKS  235 (251)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999999999999999999998663  34556677788999999999999999999999853

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.8e-51  Score=327.69  Aligned_cols=220  Identities=25%  Similarity=0.333  Sum_probs=166.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----c-C
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----V-G   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~-g   80 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|++++++++.++    ..++..+.||+++++++++++++    + |
T Consensus         6 LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   85 (259)
T d1xq1a_           6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   85 (259)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence            3577889999999999999999999999999999999887766544    35688999999999999887754    4 6


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||+....++.+.+.++ |++++++|+.++++++++++|+|++++ .|+||++||..+..+.++..+|+++|+
T Consensus        86 ~idilvnnAG~~~~~~~~~~~~~~-~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKa  163 (259)
T d1xq1a_          86 KLDILINNLGAIRSKPTLDYTAED-FSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSASVGSIYSATKG  163 (259)
T ss_dssp             CCSEEEEECCC------CCCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------CCHHHHHHH
T ss_pred             CcccccccccccCCCchhhCCHHH-HHHHHHHHhhhheeeehhhhhcccccc-ccccccccccccccccccccccccccc
Confidence            899999999999888999999998 999999999999999999999999887 799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+.+|+|+++.|++++|||||+|+||+++|+|.+... .++..+......|++|+++|+|+|++++||+|+.
T Consensus       164 al~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~-~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~  234 (259)
T d1xq1a_         164 ALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPA  234 (259)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSGG
T ss_pred             chhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhc-hHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999987644 3455667778899999999999999999999974

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=3.7e-52  Score=332.96  Aligned_cols=222  Identities=22%  Similarity=0.325  Sum_probs=198.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH-hHHH----HHhhCCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA-NLDS----LKQAFPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~----~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+ .+++    +.+...++..+++|++|++++++++++    +|
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   84 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            35578889999999999999999999999999999854 3443    444445688899999999999887754    59


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||+..+.++.+.+.++ |++++++|+.++++++++++|+|.+++.+++|+++||..+..+.++..+|+++|+
T Consensus        85 ~iDiLVnnAG~~~~~~~~~~~~~~-~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKa  163 (261)
T d1geea_          85 KLDVMINNAGLENPVSSHEMSLSD-WNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKG  163 (261)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEeeccceecCCcchhhcCHHH-HHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCc
Confidence            999999999999888999999998 9999999999999999999999988875567999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+.+|+|+++.|++++|||||+|+||+++|+|.......++..+......|++|+++|+|||+++.||+|+.
T Consensus       164 al~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~  235 (261)
T d1geea_         164 GMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSE  235 (261)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             cchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999998765445566667788899999999999999999999974

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=2.7e-51  Score=326.43  Aligned_cols=218  Identities=24%  Similarity=0.223  Sum_probs=199.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      +.++++||||++|||+++|++|+++|++|++++|++++++++.++.+ .+.++++|+++++++++++++    +|++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            56788899999999999999999999999999999999998887764 578899999999999888755    4999999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||+....++.+.+.++ |++++++|+.++++++++++|+|++++ .|+||++||..+..+.++..+|++||+|+.+|
T Consensus        84 VnnAg~~~~~~~~~~~~~~-~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asKaal~~l  161 (254)
T d1hdca_          84 VNNAGISTGMFLETESVER-FRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGVRGL  161 (254)
T ss_dssp             EECCCCCCCSCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EecCccccccccccccccc-cchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhcccccchhhHHHHHHHHHHH
Confidence            9999999888889999998 999999999999999999999999887 79999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcC-CCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFA-GKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~-~~~~ia~~~~~l~s~~  232 (238)
                      +|+++.|++++|||||+|+||+++|+|..+.  .++..+......|++|++ +|+|+|++++||+|+.
T Consensus       162 t~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~  227 (254)
T d1hdca_         162 SKLAAVELGTDRIRVNSVHPGMTYTPMTAET--GIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDT  227 (254)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECSBCCHHHHHH--TCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHhCCCceEEEEeeeCcccCccchhc--CHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchh
Confidence            9999999999999999999999999997653  234455666788999998 6999999999999974

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=2.6e-51  Score=328.42  Aligned_cols=220  Identities=23%  Similarity=0.255  Sum_probs=188.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh-HhHHHHHhh-----CCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ-ANLDSLKQA-----FPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      +.++++||||++|||+++|++|+++|++|++++|++ +.++++.++     ..++.++++|++|++++++++++    +|
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            567889999999999999999999999999999974 455544332     24688899999999999888755    49


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||+....++.+.+.++ |++++++|+.++++++++++|+|++++ .|+||++||..+..+.++..+|++||+
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~-~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEK-WDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCcEEEeecccccCCchhhhhHHh-hhhhhhccccccccccchhhhhHhhcC-CceEeecccccceeccCCcchhhhhhh
Confidence            999999999999888899999998 999999999999999999999999887 799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC----------CCccCCcccCCCCCCcCCCCCcccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD----------PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s  230 (238)
                      |+.+|+|+++.|++++|||||+|+||+++|+|.+.....          ....+.+....|++|+++|+|+|+++.||+|
T Consensus       161 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S  240 (260)
T d1x1ta1         161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred             hHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999997653221          1223445677899999999999999999999


Q ss_pred             cc
Q psy14567        231 SV  232 (238)
Q Consensus       231 ~~  232 (238)
                      +.
T Consensus       241 ~~  242 (260)
T d1x1ta1         241 DA  242 (260)
T ss_dssp             GG
T ss_pred             hh
Confidence            84

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.9e-51  Score=326.51  Aligned_cols=218  Identities=26%  Similarity=0.308  Sum_probs=192.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~li   86 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+++..+...+ . +..++++|++|++++++++++    +|++|++|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~-~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA-I-GGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHH-H-TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-c-CCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            56788999999999999999999999999999999877554433 3 456789999999998887755    49999999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||+..+.++.+.+.++ |++++++|+.++++++++++|+|++++ .|+||+++|..+..+.++..+|+++|+|+.+|+
T Consensus        82 nnAG~~~~~~~~~~~~e~-~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt  159 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPE-WRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASKGGLVNLT  159 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHH
T ss_pred             EeCcCCCCCChhhCCHHH-HHHHHHhhhhhHhhhhhhhcccccccc-cccccccccccccccccccchhHHHHHHHHHHH
Confidence            999999889999999998 999999999999999999999999887 799999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCC----CCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTG----WSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++.|++++|||||+|+||+++|+|..+.    ..+++..+.+....|++|+++|+|+|+++.||+|+.
T Consensus       160 k~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~  229 (248)
T d2d1ya1         160 RSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEK  229 (248)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999986532    123344556677899999999999999999999974

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=8.3e-51  Score=323.60  Aligned_cols=220  Identities=23%  Similarity=0.255  Sum_probs=197.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---CCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---PNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+++.++++.++.   .++.++++|++|++++++++++    +|++|
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   84 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence            4577888999999999999999999999999999999888776654   3588899999999999887755    49999


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||+....++.+.+.++ |++++++|+.++++++++++|+|.+++.+++||++||..+..+.++..+|+++|+|+.
T Consensus        85 iLVnnAg~~~~~~~~~~~~~~-~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal~  163 (251)
T d1zk4a1          85 TLVNNAGIAVNKSVEETTTAE-WRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVR  163 (251)
T ss_dssp             EEEECCCCCCCCCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEEeccccccccchhcccccc-hhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHHh
Confidence            999999999888999999998 9999999999999999999999998875569999999999999999999999999999


Q ss_pred             HHHHHHHHH--hCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        164 SITRTMALE--LGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       164 ~l~~~l~~~--~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+++++.|  ++++|||||+|+||+++|+|.+..... +.......+.|++|+++|+|+|++++||+|+.
T Consensus       164 ~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~  233 (251)
T d1zk4a1         164 IMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGA-EEAMSQRTKTPMGHIGEPNDIAYICVYLASNE  233 (251)
T ss_dssp             HHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTH-HHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             cchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCH-HHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999998  679999999999999999998765433 33334556789999999999999999999985

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=2.3e-51  Score=327.80  Aligned_cols=219  Identities=26%  Similarity=0.295  Sum_probs=195.4

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      ||++||||++|||+++|++|+++|++|++++|++++++++.++    ..++..++||++|++++++++++    +|++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            6789999999999999999999999999999999887765444    35788899999999999887754    599999


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      +|||||+....++.+.+.++ |++++++|+.++++++++++|+|.+++..++|+++||..+..+.++...|+++|+|+.+
T Consensus        82 lVnnAG~~~~~~~~~~~~~~-~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  160 (255)
T d1gega_          82 IVNNAGVAPSTPIESITPEI-VDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  160 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEecccccccCcHHHhhhhh-hhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHh
Confidence            99999999888999999998 99999999999999999999998887657899999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCeEEEEEeCCceecCcccCC---------CCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        165 ITRTMALELGPYNIRVNSVQPTVVMTQMGRTG---------WSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       165 l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+|+++.|++++|||||+|+||+++|+|....         ....+....+.+..|++|+++|+|+|++++||+|+.
T Consensus       161 ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~  237 (255)
T d1gega_         161 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPD  237 (255)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999986432         112233445667899999999999999999999974

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=9e-52  Score=330.63  Aligned_cols=220  Identities=24%  Similarity=0.317  Sum_probs=195.8

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CCCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FPNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      .+|++||||++|||+++|++|+++|++|++++|++++++++.++    ..++..+++|++|++++++++++    +|++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            36889999999999999999999999999999999887766544    35688999999999999887754    59999


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHH--HhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTM--IDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      ++|||||+....++.+.+.++ |++++++|+.++++++++++|++  .+++ .|+||+++|..+..+.++..+|++||+|
T Consensus        82 ilVnnAG~~~~~~~~~~~~e~-~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~~~~~~~~~Y~asKaa  159 (257)
T d2rhca1          82 VLVNNAGRPGGGATAELADEL-WLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVHAAPYSASKHG  159 (257)
T ss_dssp             EEEECCCCCCCSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             EEEecccccCCCChHHcCHHH-HHHHHHHHhhhhhHHHHHHhHHHHHHhcC-CcccccccccccccccccchhHHHHHHH
Confidence            999999999888899999998 99999999999999999999974  4444 6899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCC---------CCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG---------WSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.+|+|+++.|++++|||||+|+||+++|+|.+..         ...++..+.+.+..|++|+++|+|+|++++||+|+.
T Consensus       160 l~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~  239 (257)
T d2rhca1         160 VVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG  239 (257)
T ss_dssp             HHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999986432         223455566778899999999999999999999975


Q ss_pred             c
Q psy14567        233 G  233 (238)
Q Consensus       233 ~  233 (238)
                      .
T Consensus       240 s  240 (257)
T d2rhca1         240 A  240 (257)
T ss_dssp             G
T ss_pred             h
Confidence            3

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=2.7e-51  Score=327.48  Aligned_cols=221  Identities=25%  Similarity=0.323  Sum_probs=199.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.+.++++.++. +++..+++|+++++++++++++    +|++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            4578899999999999999999999999999999999998887765 4688899999999999888755    4999999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||+....++.+.+.++ |++.+++|+.+++++++++.|.+.+++.+|+||++||..+..+.++..+|++||+|+.+|
T Consensus        84 VnnAg~~~~~~~~~~~~~~-~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  162 (256)
T d1k2wa_          84 VNNAALFDLAPIVEITRES-YDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISL  162 (256)
T ss_dssp             EECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EeecccccccccccCCHHH-HHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHHH
Confidence            9999999888899999998 999999999999999999999887765479999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccC---------CCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRT---------GWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~---------~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++++.|++++|||||+|+||+++|+|.+.         ....++..+.+....|++|+++|+|+|++++||+|+.
T Consensus       163 t~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S~~  238 (256)
T d1k2wa_         163 TQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATPE  238 (256)
T ss_dssp             HHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTSGG
T ss_pred             HHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999998642         1233444556677899999999999999999999984

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.9e-51  Score=325.96  Aligned_cols=215  Identities=23%  Similarity=0.318  Sum_probs=193.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEe-cCChHhHHHHHh----hCCCceEEEeecCCHHHHHHHHHh----cCCcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIAL-SKTQANLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSK----VGPVD   83 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~----~g~id   83 (238)
                      +|++||||++|||+++|++|+++|++|++. .|+++.++++.+    ...++.++++|++|++++++++++    +|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            488999999999999999999999999886 566666655544    335688899999999999887754    59999


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHH
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALD  163 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~  163 (238)
                      ++|||||.....++.+.+.++ |++++++|+.++++++++++|+|.+++ +|+||++||..+..+.++..+|++||+|+.
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~-~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaal~  159 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQ-WDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             ccccccccccccchhccchHH-HHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCCCCCHHHHHHHHHHH
Confidence            999999999888999999998 999999999999999999999999887 799999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccc-cc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLL-PS  231 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~-s~  231 (238)
                      +|+|+++.|++++|||||+|+||+++|+|.++.  .++..+....+.|++|+++|+|+|+++.||+ |+
T Consensus       160 ~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~  226 (244)
T d1edoa_         160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSP  226 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCS
T ss_pred             HChHHHHHHHhhhCcEEEEEecceeccHHHHHh--hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCc
Confidence            999999999999999999999999999998764  3455566778899999999999999999996 65

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=2e-51  Score=328.62  Aligned_cols=221  Identities=24%  Similarity=0.341  Sum_probs=198.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHh----cC-
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK----VG-   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~----~g-   80 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|++++++++.++.    .+..++++|++|++++++++++    ++ 
T Consensus         6 L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            35678899999999999999999999999999999998877665543    4678899999999999887754    45 


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||+....++.+.+.++ |++++++|+.++++++++++|+|.+++ .|+||+++|..+..+.++...|+++|+
T Consensus        86 ~idilvnnAG~~~~~~~~~~~~e~-~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKa  163 (259)
T d2ae2a_          86 KLNILVNNAGIVIYKEAKDYTVED-YSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGATKG  163 (259)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CceEEEECCceeccCccccCCHHH-HHHHHhcccceeEEEEeeccchhhhhc-ccccccccccccccccccccchHHHHH
Confidence            799999999999888899999998 999999999999999999999999887 799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC---CccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP---AKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~---~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+.+|+|+++.|++++|||||+|+||+++|+|.+.....+   +..+.+...+|++|+++|+|+|++++||+|+.
T Consensus       164 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~  238 (259)
T d2ae2a_         164 AMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPA  238 (259)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999976544332   33445667899999999999999999999974

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.4e-51  Score=322.12  Aligned_cols=216  Identities=26%  Similarity=0.338  Sum_probs=195.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~li   86 (238)
                      +.++++||||++|||+++|++|+++|++|++++|++++++++.++. +...++||++|++++++++++    +|++|++|
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV   82 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-GAHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-TCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-CCeEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence            5678999999999999999999999999999999999999988766 577899999999999888754    48999999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||+....++.+.+.++ |++.+++|+.++++++++++|.|.+++ .+.++++|| .+..+.++..+|+++|+|+.+|+
T Consensus        83 nnAG~~~~~~~~~~~~~~-~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss-~~~~~~~~~~~Y~asKaal~~lt  159 (242)
T d1ulsa_          83 HYAGITRDNFHWKMPLED-WELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTAS-RVYLGNLGQANYAASMAGVVGLT  159 (242)
T ss_dssp             ECCCCCCCCCGGGCCHHH-HHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECC-GGGGCCTTCHHHHHHHHHHHHHH
T ss_pred             ECCcccccCchhhCcchh-hhccccccchhhhhhhhhccccccccc-cceeeeecc-ccccCCCCCcchHHHHHHHHHHH
Confidence            999999888999999998 999999999999999999999998876 677777766 45778889999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++.|++++|||||+|+||+++|+|....  +++..+......|++|+++|+|+|+++.||+|+.
T Consensus       160 k~lA~ela~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~  223 (242)
T d1ulsa_         160 RTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDE  223 (242)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHhhhCcEEEEEeeCcccChhhhcC--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchh
Confidence            999999999999999999999999998653  3455566778899999999999999999999984

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-51  Score=327.13  Aligned_cols=218  Identities=21%  Similarity=0.314  Sum_probs=195.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~li   86 (238)
                      +.++++||||++|||+++|+.|+++|++|++++|+++.++++.++.++..+++||++|++++++++++    +|++|++|
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV   84 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   84 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            45678889999999999999999999999999999999999999999999999999999999887754    49999999


Q ss_pred             EccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         87 NNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        87 ~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      ||||+.. ..++.+.+.++ |++++++|+.++++++++++|+|+++  +|+||++||..+..+.++..+|+++|+|+.+|
T Consensus        85 nnAG~~~~~~~~~~~~~~~-~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l  161 (250)
T d1ydea1          85 NNAGHHPPPQRPEETSAQG-FRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAIGQAQAVPYVATKGAVTAM  161 (250)
T ss_dssp             ECCCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHHCCTTCHHHHHHHHHHHHH
T ss_pred             ecccccccccccccccHHH-HHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCcccccccccccccCcchhHHHHhhHHHH
Confidence            9999764 45667788888 99999999999999999999999865  48999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCC----CCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS----DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +|+++.|++++|||||+|+||+++|+|.++...    ..+..+......|++|+++|+|+|+++.||+|+
T Consensus       162 t~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd  231 (250)
T d1ydea1         162 TKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE  231 (250)
T ss_dssp             HHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            999999999999999999999999998754211    122344455678999999999999999999987

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=4.7e-51  Score=326.79  Aligned_cols=222  Identities=23%  Similarity=0.318  Sum_probs=195.7

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHh----cC
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      ..+.++++||||++|||+++|+.|+++|++|++++|+++.++++.+++    .++..++||++|++++++++++    +|
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            346788999999999999999999999999999999998877665543    4688999999999999887754    49


Q ss_pred             CccEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         81 PVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        81 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      ++|++|||||+.. ..++.+.+.++ |++++++|+.++++++++++|.|.+++ .|+||++||..+..+.++..+|+++|
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~-~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDD-FARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPNMAAYGTSK  159 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             CCCeehhhhccccccCccccccHHH-HHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccCCcchHHHHHHH
Confidence            9999999999874 46788899998 999999999999999999999999887 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccC--------------CCCCCCccCCcccCCCCCCcCCCCCccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT--------------GWSDPAKAGPMLAKTPLGRFAGKLKPKPWN  225 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~--------------~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~  225 (238)
                      +|+.+|+|+++.|++++|||||+|+||+++|+|...              ...+++..+.+....|++|+++|+|+|+++
T Consensus       160 aal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v  239 (260)
T d1zema1         160 GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVV  239 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHH
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence            999999999999999999999999999999998531              111223344566789999999999999999


Q ss_pred             ccccccc
Q psy14567        226 RWLLPSV  232 (238)
Q Consensus       226 ~~l~s~~  232 (238)
                      .||+|+.
T Consensus       240 ~fL~S~~  246 (260)
T d1zema1         240 AFLLGDD  246 (260)
T ss_dssp             HHHHSGG
T ss_pred             HHHhCch
Confidence            9999975

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=5.6e-51  Score=325.72  Aligned_cols=220  Identities=24%  Similarity=0.332  Sum_probs=193.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh----CC--CceEEEeecCCHHHHHHHHHh----cC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA----FP--NVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+++.+++..++    .+  ++..++||++|++++++++++    +|
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            456889999999999999999999999999999999887665443    22  477889999999999888754    49


Q ss_pred             CccEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         81 PVDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        81 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      ++|++|||||+.. ..++.+.+.++ |++++++|+.++++++++++|.|++++ +|+||++||..+..+.++..+|+++|
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~-~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asK  160 (258)
T d1iy8a_          83 RIDGFFNNAGIEGKQNPTESFTAAE-FDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGNQSGYAAAK  160 (258)
T ss_dssp             CCSEEEECCCCCCCCBCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred             CCCEEEECCcccccCCchhhhhhhH-HHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhccCCCCchHHHHHH
Confidence            9999999999764 45678888888 999999999999999999999999887 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC------CCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW------SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+.+|+|+++.|++++|||||+|+||+++|+|.+...      ...+..+.+....|++|+++|+|+|+++.||+|+.
T Consensus       161 aal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~  239 (258)
T d1iy8a_         161 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDD  239 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999999865321      11234445677889999999999999999999984

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.9e-50  Score=318.69  Aligned_cols=211  Identities=23%  Similarity=0.307  Sum_probs=183.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh----cCCccEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGPVDVLI   86 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~id~li   86 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+++..       .++..+++|++|++++++++++    +|++|++|
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLV   78 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLV   78 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-------cCceEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence            567889999999999999999999999999999997553       3567899999999999888755    48999999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~  166 (238)
                      ||||+....++.+.+.++ |++++++|+.+++.++++++|+|.+++ .|+||++||..+..+.++..+|++||+|+.+|+
T Consensus        79 nnAG~~~~~~~~~~~~e~-~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt  156 (237)
T d1uzma1          79 SNAGLSADAFLMRMTEEK-FEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAASKAGVIGMA  156 (237)
T ss_dssp             EECSCCC-----CCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----CCHHHHHHHHHHHHHH
T ss_pred             eeecccccccHhhCCHHH-HHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCCcccHHHHHHHHHHHHHH
Confidence            999999888999999988 999999999999999999999999888 789999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++.|++++|||||+|+||+++|+|.+..  .++..+...+..|++|+++|+|+|+++.||+|+.
T Consensus       157 ~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~  220 (237)
T d1uzma1         157 RSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASED  220 (237)
T ss_dssp             HHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHhhhhcCCceeeeeeeCcCCChhhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999998753  3344556677899999999999999999999984

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=9e-50  Score=317.84  Aligned_cols=219  Identities=23%  Similarity=0.208  Sum_probs=194.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHh----cCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSK----VGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~----~g~id~l   85 (238)
                      +.++++||||++|||+++|++|+++|++|++++|++++++++.++.+ +..++++|+++++++++++++    +|++|++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil   84 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            44678889999999999999999999999999999999998877764 577889999999999887755    4899999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||+....++.+.+.++ |++++++|+.++++++++++|+|+++  +|+||++||..+..+.++..+|+++|+|+.+|
T Consensus        85 VnnAG~~~~~~~~~~~~~~-~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l  161 (253)
T d1hxha_          85 VNNAGILLPGDMETGRLED-FSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASVSSWLPIEQYAGYSASKAAVSAL  161 (253)
T ss_dssp             EECCCCCCCBCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred             EecccccCCCCcccCCHHH-HHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccchhhhcCccccccccchhHHHHHH
Confidence            9999999888899999998 99999999999999999999999754  59999999999999999999999999999999


Q ss_pred             HHHHHHHhCC--CCeEEEEEeCCceecCcccCCCCC---CCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGP--YNIRVNSVQPTVVMTQMGRTGWSD---PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~--~~i~v~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+++.|+++  +|||||+|+||+++|+|.+.....   ++.........|++|+++|+|+|+++.||+|+.
T Consensus       162 t~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~  233 (253)
T d1hxha_         162 TRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDE  233 (253)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChh
Confidence            9999999987  459999999999999987543322   233445556678999999999999999999974

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=2.9e-49  Score=312.54  Aligned_cols=211  Identities=24%  Similarity=0.286  Sum_probs=189.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCE-------EEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHH----
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAI-------IIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVS----   77 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~-------V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~----   77 (238)
                      +|++||||++|||+++|++|+++|++       |++++|+.++++++.+++    ..+.+++||++|+++++++++    
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999997       899999999887765543    457889999999999988775    


Q ss_pred             hcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhH
Q psy14567         78 KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSA  157 (238)
Q Consensus        78 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~  157 (238)
                      ++|++|++|||||+....++.+.+.++ |++++++|+.++++++++++|+|++++ .|+||++||..+..+.++...|++
T Consensus        82 ~~g~iDilvnnAg~~~~~~~~~~~~~~-~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~a  159 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFGALSDLTEED-FDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIYCM  159 (240)
T ss_dssp             HTSCCSEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCcceeecccccccCCccccCCHHH-HhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCCCCChHHHH
Confidence            459999999999999889999999998 999999999999999999999999887 799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGLNW  236 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~~~  236 (238)
                      ||+|+.+|+++++.|++++|||||+|+||+++|+|..+..+.           ..+|+.+|+|+|++++||+|++...|
T Consensus       160 sK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~-----------~~~~~~~PedvA~~v~~l~s~~~~~~  227 (240)
T d2bd0a1         160 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-----------MQALMMMPEDIAAPVVQAYLQPSRTV  227 (240)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-----------TGGGSBCHHHHHHHHHHHHTSCTTEE
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh-----------hHhcCCCHHHHHHHHHHHHcCCccCc
Confidence            999999999999999999999999999999999997653211           22567899999999999999875443

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.8e-49  Score=319.61  Aligned_cols=220  Identities=28%  Similarity=0.323  Sum_probs=187.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-------CCceEEEeecCCHHHHHHHHHh----c
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      +.++++||||++|||+++|++|+++|++|++++|++++++++.++.       .++..++||+++++++++++++    +
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5678899999999999999999999999999999999888776544       2478899999999999887754    4


Q ss_pred             CCccEEEEccCCCCCCCCC----CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc-ccccccCCCCch
Q psy14567         80 GPVDVLINNAAVARFDRFL----DIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS-IAGKTALEGHTI  154 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS-~~~~~~~~~~~~  154 (238)
                      |++|++|||||+..+.++.    +.+.++ |++++++|+.+++.++++++|+|++++  |.+|+++| .++..+.++...
T Consensus        84 g~iDilvnnAG~~~~~~~~~~~~d~~~~~-~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~Ss~a~~~~~~~~~~  160 (272)
T d1xkqa_          84 GKIDVLVNNAGAAIPDAFGTTGTDQGIDI-YHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQAQPDFLY  160 (272)
T ss_dssp             SCCCEEEECCCCCCCCTTCCCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSSSCCCSSHH
T ss_pred             CCceEEEeCCcccCcccccccchhccHHH-HHHHHHhhhhHHHHHHHhhcccccccC--CccccccchhccccCCCCcch
Confidence            8999999999988665543    445566 999999999999999999999998764  55665555 566788899999


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC-------CccCCcccCCCCCCcCCCCCccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP-------AKAGPMLAKTPLGRFAGKLKPKPWNRW  227 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~r~~~~~~ia~~~~~  227 (238)
                      |+++|+|+.+|+|+++.|++++|||||+|+||+++|+|.......+       +........+|++|+++|+|||++++|
T Consensus       161 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~f  240 (272)
T d1xkqa_         161 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILF  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999987544332       123345677899999999999999999


Q ss_pred             cccccc
Q psy14567        228 LLPSVG  233 (238)
Q Consensus       228 l~s~~~  233 (238)
                      |+|+..
T Consensus       241 L~S~~a  246 (272)
T d1xkqa_         241 LADRNL  246 (272)
T ss_dssp             HHCHHH
T ss_pred             HhCcch
Confidence            999643

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.9e-49  Score=317.18  Aligned_cols=221  Identities=27%  Similarity=0.311  Sum_probs=178.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-------CCceEEEeecCCHHHHHHHHHh----
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAAVSK----   78 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~----   78 (238)
                      .+.+|++||||++|||+++|++|+++|++|++++|++++++++.++.       .++.++++|+++++++++++++    
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999887765543       2478899999999999887754    


Q ss_pred             cCCccEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccc-ccccCCCCc
Q psy14567         79 VGPVDVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIA-GKTALEGHT  153 (238)
Q Consensus        79 ~g~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~-~~~~~~~~~  153 (238)
                      +|++|++|||||+..+    ..+.+.+.++ |++.+++|+.+++.++++++|+|++++  |.+|+++|.. +..+.++..
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~-~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~S~~~~~~~~~~~~  159 (264)
T d1spxa_          83 FGKLDILVNNAGAAIPDSQSKTGTAQSIES-YDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATPDFP  159 (264)
T ss_dssp             HSCCCEEEECCC-------------CCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCCTTSH
T ss_pred             hCCCCEeecccccccCCccccccccCCHHH-HHHHHHHhHHHHHHHHhhhCCcccccc--CcceeeeeeccccccCCCch
Confidence            5999999999998643    2345567777 999999999999999999999998764  6777776665 466888899


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCcc-------CCcccCCCCCCcCCCCCcccccc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKA-------GPMLAKTPLGRFAGKLKPKPWNR  226 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~-------~~~~~~~~~~r~~~~~~ia~~~~  226 (238)
                      +|+++|+|+.+|+|+++.|++++|||||+|+||+++|+|......+++..       ..+.+..|++|+++|+|+|+++.
T Consensus       160 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~  239 (264)
T d1spxa_         160 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA  239 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999999986543333222       23456789999999999999999


Q ss_pred             ccccccc
Q psy14567        227 WLLPSVG  233 (238)
Q Consensus       227 ~l~s~~~  233 (238)
                      ||+|+..
T Consensus       240 fL~S~~~  246 (264)
T d1spxa_         240 FLADRKT  246 (264)
T ss_dssp             HHHCHHH
T ss_pred             HHhCCcc
Confidence            9999653

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=7.1e-49  Score=313.50  Aligned_cols=222  Identities=28%  Similarity=0.384  Sum_probs=193.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHh----c-C
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSK----V-G   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~----~-g   80 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|++++++++.+++    ....++++|+++++++++++++    + |
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            36678899999999999999999999999999999998877655443    4678899999999999887754    4 6


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||.....++.+.+.++ |++++++|+.+++.+++++.|.|.+++ .|+||++||..+..+.++...|+++|+
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~-~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~~~~~~~Y~~sK~  161 (258)
T d1ae1a_          84 KLNILVNNAGVVIHKEAKDFTEKD-YNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALPSVSLYSASKG  161 (258)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CcEEEeccccccccCccccCCHHH-Hhhhhhhcccccccccccccccccccc-ccccccccccccccccccchhHHHHHH
Confidence            899999999999888999999998 999999999999999999999999887 899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC----CCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS----DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      |+++|+|.++.|++++|||||+|+||+++|+|.+....    ..+..+.+..+.|++|+++|+|+|+++.||+|+..
T Consensus       162 al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s  238 (258)
T d1ae1a_         162 AINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAA  238 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhh
Confidence            99999999999999999999999999999999765433    23455667788999999999999999999999743

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.7e-48  Score=313.41  Aligned_cols=220  Identities=22%  Similarity=0.286  Sum_probs=189.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC---CceEEEeecCCHHHHHHHHH----hcCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP---NVQTVQVDLQDWARTRAAVS----KVGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~----~~g~id   83 (238)
                      +.++++||||++|||+++|++|+++|++|++++|++++++++.+++.   .+.+++||++|+++++++++    ++|++|
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   84 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   84 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence            55778889999999999999999999999999999999888877653   47788999999999988875    459999


Q ss_pred             EEEEccCCCCCC--CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCC-CchhhHHHH
Q psy14567         84 VLINNAAVARFD--RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEG-HTIYSASKA  160 (238)
Q Consensus        84 ~li~~ag~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~-~~~y~~sK~  160 (238)
                      ++|||||+....  .+.+.+.++ |++++++|+.++++++++++|+|.+++ .|+||+++|..+..+.++ ...|+++|+
T Consensus        85 ~lVnnAG~~~~~~~~~~~~~~~~-~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~~Y~asKa  162 (268)
T d2bgka1          85 IMFGNVGVLSTTPYSILEAGNED-FKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTATKH  162 (268)
T ss_dssp             EEEECCCCCCSSCSSTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCTTSCHHHHHHHH
T ss_pred             eeccccccccCCCcccccCcHHH-HHHHHHHhhcchhhhhhhhcchHhhcC-CCCccccccccccccccccccccchhHH
Confidence            999999987544  466778887 999999999999999999999999887 799999999999886655 458999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCc-cCC--cccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAK-AGP--MLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~-~~~--~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+.+|+|+++.|++++|||||+|+||+++|+|..+.+..+.. .+.  .....|++|+++|+|||++++||+|+.
T Consensus       163 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~  237 (268)
T d2bgka1         163 AVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDE  237 (268)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGG
T ss_pred             HHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChh
Confidence            999999999999999999999999999999998765433221 111  123458899999999999999999974

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-48  Score=314.88  Aligned_cols=220  Identities=20%  Similarity=0.272  Sum_probs=194.9

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC---------CCceEEEeecCCHHHHHHHHHh--
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF---------PNVQTVQVDLQDWARTRAAVSK--   78 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~--   78 (238)
                      .+.+|++||||++|||+++|++|+++|++|++++|+.+++++..++.         .++..++||++|++++++++++  
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            36788999999999999999999999999999999998776654332         3578899999999999888755  


Q ss_pred             --cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         79 --VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        79 --~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                        +|++|++|||||+....++.+.+.++ |++++++|+.++++++++++|.|.+++ .|+||++|| .+..+.++...|+
T Consensus        90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~-~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss-~~~~~~~~~~~Y~  166 (297)
T d1yxma1          90 DTFGKINFLVNNGGGQFLSPAEHISSKG-WHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIV-PTKAGFPLAVHSG  166 (297)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECC-CCTTCCTTCHHHH
T ss_pred             HHhCCeEEEEeeccccccCchhhhhhhh-hhhhhcccccchhhHHHHHHHhhcccc-ccccccccc-cccccccccccch
Confidence              48999999999998888899999998 999999999999999999999999888 788998865 4556778899999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCC--CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWS--DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++|+|+.+|+|+++.|++++|||||+|+||+++|++..+...  .++..+...+..|++|+++|+|||++++||+|+.
T Consensus       167 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~  244 (297)
T d1yxma1         167 AARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPA  244 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999999999765432  3456677778899999999999999999999984

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=6e-49  Score=309.94  Aligned_cols=214  Identities=22%  Similarity=0.259  Sum_probs=193.0

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      +.+.++++||||++|||+++|++|+++|++|++++|+++.+++.     ...++.||+++  +++.+++++|++|++|||
T Consensus         1 gLkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-----~~~~~~~Dv~~--~~~~~~~~~g~iD~lVnn   73 (234)
T d1o5ia_           1 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-----GHRYVVCDLRK--DLDLLFEKVKEVDILVLN   73 (234)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-----CSEEEECCTTT--CHHHHHHHSCCCSEEEEC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-----CCcEEEcchHH--HHHHHHHHhCCCcEEEec
Confidence            45678999999999999999999999999999999998776554     34578899986  477888999999999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRT  168 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~  168 (238)
                      ||+....++.+.+.++ |++.+++|+.+++.++++++|.|++++ .|+||+++|..+..+.++...|+++|+|+.+|+|+
T Consensus        74 AG~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~  151 (234)
T d1o5ia_          74 AGGPKAGFFDELTNED-FKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIENLYTSNSARMALTGFLKT  151 (234)
T ss_dssp             CCCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             ccccCCcchhhhhhHH-HHHHhhhhhhhhhhhhhcccccccccc-cccccccccccccccccccccchhHHHHHHHHHHH
Confidence            9998888888999998 999999999999999999999999877 79999999999999999999999999999999999


Q ss_pred             HHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        169 MALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       169 l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++.|++++|||||+|+||+++|++..... .++..+...+..|++|+++|+|+|+++.||+|+.
T Consensus       152 lA~ela~~gIrVN~I~PG~v~T~~~~~~~-~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~  214 (234)
T d1o5ia_         152 LSFEVAPYGITVNCVAPGWTETERVKELL-SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEK  214 (234)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCCTTHHHHS-CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHhcccCeEEeecccCccchhhhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh
Confidence            99999999999999999999999976543 3344556677899999999999999999999974

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.2e-49  Score=317.26  Aligned_cols=216  Identities=18%  Similarity=0.187  Sum_probs=189.8

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHH----HhcCCccEEEEc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAV----SKVGPVDVLINN   88 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~----~~~g~id~li~~   88 (238)
                      .|++||||++|||+++|++|+++|++|++++|+.+.++++.+..  ..+.++|+++++++++++    +++|++|++|||
T Consensus         1 ~TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~--~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnN   78 (252)
T d1zmta1           1 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA--ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSN   78 (252)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH--HHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh--CcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            36789999999999999999999999999999988887776542  224568998887776665    456999999999


Q ss_pred             cCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHH
Q psy14567         89 AAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITR  167 (238)
Q Consensus        89 ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~  167 (238)
                      ||+.. ..++.+.+.++ |++.+++|+.++++++++++|+|++++ .|+||++||..+..+.++..+|+++|+|+.+|+|
T Consensus        79 Ag~~~~~~~~~~~~~e~-~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~  156 (252)
T d1zmta1          79 DIFAPEFQPIDKYAVED-YRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKELSTYTSARAGACTLAN  156 (252)
T ss_dssp             CCCCCCCCCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCChhhCCHHH-HHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccccccccccccccccccHHHHHH
Confidence            99764 46788888888 999999999999999999999999887 7999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCeEEEEEeCCceecCcccCCCC------CCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        168 TMALELGPYNIRVNSVQPTVVMTQMGRTGWS------DPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       168 ~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +++.|++++|||||+|+||+++|+|....+.      .++..+.+.+.+|++|+++|+|+|+++.||+|+.
T Consensus       157 ~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~  227 (252)
T d1zmta1         157 ALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGS  227 (252)
T ss_dssp             HHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTS
T ss_pred             HHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999765432      2344556678899999999999999999999984

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.3e-48  Score=314.75  Aligned_cols=219  Identities=25%  Similarity=0.284  Sum_probs=188.6

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-------CCceEEEeecCCHHHHHHHHHh----c
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      +.++++||||++|||+++|++|+++|++|++++|++++++++.++.       .++..+++|+++++++++++++    +
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            4677889999999999999999999999999999998877765543       2478899999999999887754    5


Q ss_pred             CCccEEEEccCCCCCC--CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhH
Q psy14567         80 GPVDVLINNAAVARFD--RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSA  157 (238)
Q Consensus        80 g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~  157 (238)
                      |++|++|||||.....  ...+.+.++ |++.+++|+.+++.+++++.|+|.+++ +|+|+++||..+..+.++..+|++
T Consensus        83 G~iDilVnnAG~~~~~~~~~~~~~~e~-~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~~~~~~~~~Y~a  160 (274)
T d1xhla_          83 GKIDILVNNAGANLADGTANTDQPVEL-YQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYAC  160 (274)
T ss_dssp             SCCCEEEECCCCCCCCSCCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHHH
T ss_pred             CCceEEEeecccccccccccccCCHHH-HHHHHhhcccccccccccccccccccc-cccccchhhhhccccCCCCceehh
Confidence            8999999999976443  334456676 999999999999999999999998877 789999999988889999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCC-------CccCCcccCCCCCCcCCCCCcccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDP-------AKAGPMLAKTPLGRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~-------~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s  230 (238)
                      +|+|+.+|+|+++.|++++|||||+|+||+++|+|.......+       +........+|++|+++|+|||+++.||+|
T Consensus       161 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S  240 (274)
T d1xhla_         161 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD  240 (274)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999876543322       122334567899999999999999999998


Q ss_pred             c
Q psy14567        231 S  231 (238)
Q Consensus       231 ~  231 (238)
                      +
T Consensus       241 ~  241 (274)
T d1xhla_         241 R  241 (274)
T ss_dssp             H
T ss_pred             C
Confidence            4

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=7.7e-48  Score=310.58  Aligned_cols=217  Identities=23%  Similarity=0.344  Sum_probs=186.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHH----hcCCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVS----KVGPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~----~~g~id~l   85 (238)
                      +.++++||||++|||+++|++|+++|++|++++|++++++++.++.+ ++..+.+|++++++++++++    ++|++|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            56888999999999999999999999999999999999988877654 58889999999999888775    45999999


Q ss_pred             EEccCCCCCCCC-----CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         86 INNAAVARFDRF-----LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        86 i~~ag~~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      |||||+......     .+.+.++ |++++++|+.++++++++++|.|++++  |+||+++|..+..+.++...|+++|+
T Consensus        84 vnnAG~~~~~~~~~~~~~e~~~~~-~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~~~~~~~~~~Y~asKa  160 (276)
T d1bdba_          84 IPNAGIWDYSTALVDLPEESLDAA-FDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGFYPNGGGPLYTAAKH  160 (276)
T ss_dssp             ECCCCCCCTTCCGGGSCTTTHHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTSTTSSCHHHHHHHH
T ss_pred             cccccccCCCCccccccccchhhh-hhHHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechhccCCCCCchHHHHHH
Confidence            999998754322     3333344 999999999999999999999998764  89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC--------CCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW--------SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      |+.+|+|+++.|++++ ||||+|+||+++|+|.....        ..++..+.+....|++|+++|+|+|++++||+|+
T Consensus       161 al~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S~  238 (276)
T d1bdba_         161 AIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATR  238 (276)
T ss_dssp             HHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHCH
T ss_pred             HHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCC
Confidence            9999999999999985 99999999999999864321        2233444566789999999999999999999985

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=3.4e-48  Score=310.25  Aligned_cols=219  Identities=23%  Similarity=0.290  Sum_probs=192.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh-----CCCceEEEeecCCHHHHHHHHH----hcCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA-----FPNVQTVQVDLQDWARTRAAVS----KVGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~----~~g~   81 (238)
                      +.++++||||++|||+++|++|+++|++|++++|++++++++.++     ..++..++||++++++++++++    ++|+
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            456888999999999999999999999999999998776554332     3468889999999999988875    4599


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-------cCCCCch
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-------ALEGHTI  154 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------~~~~~~~  154 (238)
                      +|++|||||+....++.+.+.++ |++.+++|+.+++++++++.|+|.+++..+.|++++|.....       +.++..+
T Consensus        88 iDilVnnAg~~~~~~~~~~~~~~-~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~  166 (260)
T d1h5qa_          88 ISGLIANAGVSVVKPATELTHED-FAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVF  166 (260)
T ss_dssp             EEEEEECCCCCCCSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHH
T ss_pred             CcEecccccccccCCHHHhcccc-ccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccc
Confidence            99999999999888999999998 999999999999999999999997766578888888876543       2356789


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+++|+|+.+|+|+++.|++++|||||+|+||+++|+|....  .++..+.....+|++|+++|+|+|+++.||+|+.
T Consensus       167 Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~  242 (260)
T d1h5qa_         167 YNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDH  242 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGG
T ss_pred             hhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcch
Confidence            999999999999999999999999999999999999998663  4455666778899999999999999999999984

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-47  Score=303.94  Aligned_cols=220  Identities=23%  Similarity=0.302  Sum_probs=197.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      .+.++++||||++|||+++|+.|+++|++|++++|++++++++.+. ..+....+|+.+.+.++...++++++|++|||+
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~a   82 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY-PGIQTRVLDVTKKKQIDQFANEVERLDVLFNVA   82 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS-TTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc-cCCceeeeeccccccccccccccccceeEEecc
Confidence            3456678899999999999999999999999999999998887665 468889999999999999999999999999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-cCCCCchhhHHHHHHHHHHHH
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-ALEGHTIYSASKAALDSITRT  168 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~~~y~~sK~al~~l~~~  168 (238)
                      |.....++.+.+.++ |++.+++|+.+++.+++++.|+|.+++ .|+||+++|..+.. +.++..+|+++|+|+++|+|+
T Consensus        83 g~~~~~~~~~~~~~~-~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~  160 (245)
T d2ag5a1          83 GFVHHGTVLDCEEKD-WDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKS  160 (245)
T ss_dssp             CCCCCBCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHH
T ss_pred             cccCCCChhhCCHHH-HHHHHHHhhccchhHHHhhCcccccCC-CceeeeeechhhccCCccchhHHHHHHHHHHHHHHH
Confidence            999888899999998 999999999999999999999998887 79999999988764 678889999999999999999


Q ss_pred             HHHHhCCCCeEEEEEeCCceecCcccCC----CCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        169 MALELGPYNIRVNSVQPTVVMTQMGRTG----WSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       169 l~~~~~~~~i~v~~i~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++.|++++|||||+|+||+++|++....    ....+..+.....+|++|+++|+|+|+++.||+|+.
T Consensus       161 lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~  228 (245)
T d2ag5a1         161 VAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDE  228 (245)
T ss_dssp             HHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGG
T ss_pred             HHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChh
Confidence            9999999999999999999999986532    122234456677899999999999999999999974

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.4e-47  Score=303.13  Aligned_cols=215  Identities=22%  Similarity=0.268  Sum_probs=186.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHhc----CCccEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV----GPVDVL   85 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~----g~id~l   85 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.+++++..++.+ ++.++++|++++++++++++++    |++|++
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL   83 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   83 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence            56788999999999999999999999999999999999988877765 5788999999999998888655    999999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      |||||.....++.+.+.++ |++++++|+.+++.+++++.|++.++   +.|+++||. +..+.++...|+++|+|+++|
T Consensus        84 innAg~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~k~~~~~~~~~---~~i~~~ss~-a~~~~~~~~~Y~~sK~al~~l  158 (241)
T d2a4ka1          84 AHFAGVAHSALSWNLPLEA-WEKVLRVNLTGSFLVARKAGEVLEEG---GSLVLTGSV-AGLGAFGLAHYAAGKLGVVGL  158 (241)
T ss_dssp             EEGGGGTTTTC----CHHH-HHHHHHHHHHHHHHHHHHHHHHCCTT---CEEEEECCC-TTCCHHHHHHHHHCSSHHHHH
T ss_pred             ccccccccccchhhhhccc-cccccccccccccccccccccccccc---cceeecccc-ccccccCccccchhhHHHHHH
Confidence            9999998888999999998 99999999999999999999988653   455555554 455557788999999999999


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +|+++.|++++|||||+|+||+++|+|....  +++..+.+.+..|++|+++|+|+|+++.||+|+.
T Consensus       159 t~~lA~el~~~gIrvN~I~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~  223 (241)
T d2a4ka1         159 ARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEE  223 (241)
T ss_dssp             HHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHhHhCCEEeeeccCcCCCHHHHhh--hHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcch
Confidence            9999999999999999999999999997653  4455666777899999999999999999999974

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-47  Score=301.95  Aligned_cols=224  Identities=22%  Similarity=0.247  Sum_probs=191.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHh----c
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSK----V   79 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~----~   79 (238)
                      .+.+|++||||++|||+++|+.|+++|++|++++|++++++++.+++      ..+.+++||+++++++++++++    +
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            45679999999999999999999999999999999999887765543      2477889999999999887754    5


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEEcccccccc--CCCCchhh
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK-IQGSIVNVSSIAGKTA--LEGHTIYS  156 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~--~~~~~~y~  156 (238)
                      |++|++|||||.....++.+.+.++ |++.+++|+.++++++++++|.+.+++ .+|+||++||..+...  ......|+
T Consensus        88 g~iD~lVnnAg~~~~~~~~~~~~~~-~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~  166 (257)
T d1xg5a_          88 SGVDICINNAGLARPDTLLSGSTSG-WKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYS  166 (257)
T ss_dssp             CCCSEEEECCCCCCCCCTTTCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHH
T ss_pred             CCCCEEEecccccCCCccccccHHH-HHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHH
Confidence            8999999999999889999999998 999999999999999999999998765 2689999999998754  44567799


Q ss_pred             HHHHHHHHHHHHHHHHh--CCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccccc
Q psy14567        157 ASKAALDSITRTMALEL--GPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVGL  234 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~--~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~~  234 (238)
                      ++|+|+.+|+|+++.|+  +++|||||+|+||+++|++.....  ++..+......|++|+++|+|+|++++||+|+...
T Consensus       167 ~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~--~~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~a~  244 (257)
T d1xg5a_         167 ATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLH--DKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAH  244 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHT--TTCHHHHHHHHC---CBCHHHHHHHHHHHHHSCTT
T ss_pred             HHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcC--hhhHHHHHhcCCCCCCcCHHHHHHHHHHHhCChhc
Confidence            99999999999999998  788999999999999999876532  22334456678999999999999999999999765


Q ss_pred             cc
Q psy14567        235 NW  236 (238)
Q Consensus       235 ~~  236 (238)
                      .|
T Consensus       245 ~i  246 (257)
T d1xg5a_         245 IQ  246 (257)
T ss_dssp             EE
T ss_pred             Ce
Confidence            43

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-47  Score=304.36  Aligned_cols=213  Identities=22%  Similarity=0.210  Sum_probs=184.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      +.++++||||++|||+++|++|+++|++|++++|+.+++++..++.      .++.+++||+++++++++++++    +|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999999999998877765543      2477889999999999888754    59


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCceEEEEccccccccCCCCchhhHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK--IQGSIVNVSSIAGKTALEGHTIYSAS  158 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~y~~s  158 (238)
                      ++|++|||||+...        ++ |++.+++|+.+++.+++.++|+|.+++  .+|+||++||..+..+.++..+|++|
T Consensus        82 ~iDilVnnAg~~~~--------~~-~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as  152 (254)
T d2gdza1          82 RLDILVNNAGVNNE--------KN-WEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCAS  152 (254)
T ss_dssp             CCCEEEECCCCCCS--------SS-HHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CcCeeccccccccc--------cc-chheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHH
Confidence            99999999998743        23 888999999999999999999998764  24889999999999999999999999


Q ss_pred             HHHHHHHHHH--HHHHhCCCCeEEEEEeCCceecCcccCCCCC------CCccCCcccCCCCCCcCCCCCcccccccccc
Q psy14567        159 KAALDSITRT--MALELGPYNIRVNSVQPTVVMTQMGRTGWSD------PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       159 K~al~~l~~~--l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~------~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s  230 (238)
                      |+|+.+|+|+  |+.|++++|||||+|+||+++|+|.+.....      .+..+.+....|++|+++|+|+|++++||+|
T Consensus       153 Kaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s  232 (254)
T d2gdza1         153 KHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIE  232 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHc
Confidence            9999999997  6889999999999999999999997654322      1233445567899999999999999999999


Q ss_pred             cc
Q psy14567        231 SV  232 (238)
Q Consensus       231 ~~  232 (238)
                      +.
T Consensus       233 ~~  234 (254)
T d2gdza1         233 DD  234 (254)
T ss_dssp             CT
T ss_pred             CC
Confidence            74

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=7.9e-47  Score=302.21  Aligned_cols=222  Identities=22%  Similarity=0.260  Sum_probs=188.3

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEec-CChHhHHHH----HhhCCCceEEEeecCCHHHHHHHHHh----
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALS-KTQANLDSL----KQAFPNVQTVQVDLQDWARTRAAVSK----   78 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~----   78 (238)
                      |+...++++||||++|||+++|++|+++|++|++++ |+++.++++    .+...++..++||++|++++++++++    
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            466778999999999999999999999999999865 555544443    33445788999999999999887754    


Q ss_pred             cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-cCCCCchhhH
Q psy14567         79 VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-ALEGHTIYSA  157 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~~~y~~  157 (238)
                      +|++|++|||||.....++.+.+.++ |++.+++|+.++++++++++|+|+++   +++++++|..+.. +.++...|++
T Consensus        82 ~g~idilinnag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~m~~~---g~~iii~s~~~~~~~~~~~~~Y~a  157 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEVWCDELEVTQEL-FDKVFNLNTRGQFFVAQQGLKHCRRG---GRIILTSSIAAVMTGIPNHALYAG  157 (259)
T ss_dssp             HSCEEEEECCCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHEEEE---EEEEEECCGGGTCCSCCSCHHHHH
T ss_pred             cCCCcEEEeccccccccccccchHHH-HHHHHhhccceeeeehhhhhhhhhcC---CcccccccccccccCCCCchhHHH
Confidence            58999999999999888888888888 99999999999999999999999653   5788887766655 6789999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCC-----------CCCCccCCcccCCCCCCcCCCCCcccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGW-----------SDPAKAGPMLAKTPLGRFAGKLKPKPWNR  226 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~r~~~~~~ia~~~~  226 (238)
                      +|+|+.+|+|+++.|++++|||||+|+||+++|+|.++..           ..++..+.+....|++|+++|+|||+++.
T Consensus       158 sK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~  237 (259)
T d1ja9a_         158 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVS  237 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999864311           11223445567899999999999999999


Q ss_pred             ccccccc
Q psy14567        227 WLLPSVG  233 (238)
Q Consensus       227 ~l~s~~~  233 (238)
                      ||+|+..
T Consensus       238 fL~S~~a  244 (259)
T d1ja9a_         238 ALCQEES  244 (259)
T ss_dssp             HHHSGGG
T ss_pred             HHhCchh
Confidence            9999854

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.6e-47  Score=301.98  Aligned_cols=219  Identities=19%  Similarity=0.217  Sum_probs=184.3

Q ss_pred             CCcCCCCCCCCCC--chHHHHHHHHhhCCCEEEEecCChHhH---HHHHhhCCCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         10 DRTNTKGGDYPKP--GIGRCIVEKLSQHEAIIIALSKTQANL---DSLKQAFPNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        10 ~~~~v~~itG~s~--gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      .+.++++||||+|  |||+++|++|+++|++|++++|+++..   ++.....+....+++|++|++++++++++    +|
T Consensus         6 L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             CTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence            3567788899987  999999999999999999999987543   34455556788899999999999888754    59


Q ss_pred             CccEEEEccCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         81 PVDVLINNAAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        81 ~id~li~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                      ++|++|||||+...    .++.+.+.++ |+..+++|+.+++.+++++.|.|.+   +|+||++||..+..+.++..+|+
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~-~~~~~~vn~~~~~~~~~~~~~~~~~---~G~Iv~isS~~~~~~~~~~~~Y~  161 (256)
T d1ulua_          86 GLDYLVHAIAFAPREAMEGRYIDTRRQD-WLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEKVVPKYNVMA  161 (256)
T ss_dssp             SEEEEEECCCCCCHHHHSSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTSBCTTCHHHH
T ss_pred             CceEEEeccccccccccccchhhhhhhh-hhHhhhhhHHHHHHHHHHHHHHhcc---CCEEEEEeehHhcCCCCCchHHH
Confidence            99999999998643    3456677777 9999999999999999999998865   47999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++|+|+.+|+|+++.|++++|||||+|+||+++|++.......++..+...+..|++|+++|+|+|+++.||+|+.
T Consensus       162 asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~  237 (256)
T d1ulua_         162 IAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPL  237 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999998776555666777788899999999999999999999984

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=4.8e-45  Score=293.83  Aligned_cols=220  Identities=20%  Similarity=0.295  Sum_probs=185.9

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh-HhHHH----HHhhCCCceEEEeecCCHHHHHHHHHhc----C
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ-ANLDS----LKQAFPNVQTVQVDLQDWARTRAAVSKV----G   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~----~~~~~~~~~~~~~D~~~~~~v~~~~~~~----g   80 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+. +.+++    +.+...++.++++|++|+++++++++++    |
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            3557899999999999999999999999999998774 44443    4444567899999999999998887554    8


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-cCCCCchhhHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-ALEGHTIYSASK  159 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-~~~~~~~y~~sK  159 (238)
                      ++|++|||+|.....++.+.+.++ |++++++|+.+++.+++++.|+|.+   .|++++++|..+.. +.++...|+++|
T Consensus        96 ~idilV~nag~~~~~~~~~~~~~~-~~~~~~~nl~~~~~~~~~~~~~m~~---~g~~i~i~s~~~~~~~~~~~~~Y~asK  171 (272)
T d1g0oa_          96 KLDIVCSNSGVVSFGHVKDVTPEE-FDRVFTINTRGQFFVAREAYKHLEI---GGRLILMGSITGQAKAVPKHAVYSGSK  171 (272)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHSCT---TCEEEEECCGGGTCSSCSSCHHHHHHH
T ss_pred             CCCccccccccchhhhhhhhhhhH-HHHHhhhccceeeeecccccccccc---ccccccccccccccccccchhhHHHHH
Confidence            999999999998888888899888 9999999999999999999999976   46899998887655 567778899999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCC----c-------cCCcccCCCCCCcCCCCCcccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPA----K-------AGPMLAKTPLGRFAGKLKPKPWNRWL  228 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~----~-------~~~~~~~~~~~r~~~~~~ia~~~~~l  228 (238)
                      +|+++|+|+++.|++++|||||+|+||+++|+|.+.......    .       .......+|++|+++|+|||+++.||
T Consensus       172 aal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL  251 (272)
T d1g0oa_         172 GAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFL  251 (272)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999998643221110    0       11234678999999999999999999


Q ss_pred             ccccc
Q psy14567        229 LPSVG  233 (238)
Q Consensus       229 ~s~~~  233 (238)
                      +|+..
T Consensus       252 ~s~~s  256 (272)
T d1g0oa_         252 ASNDG  256 (272)
T ss_dssp             HSGGG
T ss_pred             hCchh
Confidence            99753

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-45  Score=289.49  Aligned_cols=209  Identities=20%  Similarity=0.236  Sum_probs=183.0

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHH----hc
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVS----KV   79 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~----~~   79 (238)
                      +..+.+|++||||++|||+++|++|+++|++|++++|++++++++.+++    +++..+.||++|+++++++++    ++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            4557789999999999999999999999999999999998877665544    468899999999999988875    45


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      |++|++|||||.....++.+.+.++ |++++++|+.++++++++++|.|.+++ .|+||++||..+..+.++...|++||
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asK  160 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTSDLFATQDPQ-IEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSK  160 (244)
T ss_dssp             CCCSEEEECCCCCCCCCCGGGHHHH-HHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             CCCceeEeeccccccccccccchhH-HHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCCCCcHHHHHHH
Confidence            8999999999999888888888887 999999999999999999999999887 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC---CCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccc
Q psy14567        160 AALDSITRTMALELGP---YNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLP  230 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~---~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s  230 (238)
                      +|+.+|+++|+.|+++   +||+||+|+||+++|+|.++.            ..++++..+|+++|+.+...+.
T Consensus       161 aal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~------------~~~~~~~~~pe~va~~i~~~~~  222 (244)
T d1yb1a_         161 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP------------STSLGPTLEPEEVVNRLMHGIL  222 (244)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT------------HHHHCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc------------CccccCCCCHHHHHHHHHHHHh
Confidence            9999999999999865   689999999999999986541            1244566788899888766543

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.2e-45  Score=297.44  Aligned_cols=208  Identities=19%  Similarity=0.228  Sum_probs=179.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC---------hHhHHHHHhhCC-CceEEEeecCCHHHHHHHH----
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT---------QANLDSLKQAFP-NVQTVQVDLQDWARTRAAV----   76 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~---------~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~----   76 (238)
                      +.++++||||++|||+++|++|+++|++|++.+|+         .+.++++.++.. ......+|+++.+++++++    
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            56789999999999999999999999999998654         445555544442 3456678888876665554    


Q ss_pred             HhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         77 SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        77 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                      +++|++|++|||||+....++.+.+.++ |++++++|+.++++++++++|+|++++ .|+||++||..+..+.++...|+
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~-~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~~~~~~Y~  163 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDED-WDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQANYS  163 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHH-HhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCCCCcHHHH
Confidence            5669999999999999889999999998 999999999999999999999999887 79999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +||+|+.+|+++++.|++++|||||+|+||++.|++.....            .++.|..+|+|+|++++||+|+.
T Consensus       164 asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~------------~~~~~~~~PedvA~~v~fL~S~~  227 (302)
T d1gz6a_         164 AAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP------------EDLVEALKPEYVAPLVLWLCHES  227 (302)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC------------HHHHHHSCGGGTHHHHHHHTSTT
T ss_pred             HHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc------------HhhHhcCCHHHHHHHHHHHcCCC
Confidence            99999999999999999999999999999999887643321            13567789999999999999974

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-45  Score=294.77  Aligned_cols=218  Identities=20%  Similarity=0.223  Sum_probs=180.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEE---ecCChHh---HHHHHhh----CCCceEEEeecCCHHHHHHHHHhc--C
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIA---LSKTQAN---LDSLKQA----FPNVQTVQVDLQDWARTRAAVSKV--G   80 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~---~~r~~~~---~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~--g   80 (238)
                      +|++|||||+|||+++|+.|+++|++|+.   +.|+.+.   +++..++    ..++..++||++|+++++++++++  |
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            67899999999999999999999987544   4555443   3333333    246889999999999999999877  7


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      .+|++|||+|.....++.+.+.++ |++++++|+.+++.++++++|+|.+++ .|+||++||..+..+.++...|++||+
T Consensus        83 ~idilvnnag~~~~~~~~~~~~e~-~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~~~~~~Y~asKa  160 (285)
T d1jtva_          83 RVDVLVCNAGLGLLGPLEALGEDA-VASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYCASKF  160 (285)
T ss_dssp             CCSEEEECCCCCCCSCGGGSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred             chhhhhhcccccccccccchhHhh-hhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCCCCchHHHHHHH
Confidence            899999999999888888899888 999999999999999999999999887 799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCcc---------CC------cccCCCCCCcCCCCCccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKA---------GP------MLAKTPLGRFAGKLKPKPWN  225 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~---------~~------~~~~~~~~r~~~~~~ia~~~  225 (238)
                      |+.+|+++|+.|++++|||||+|+||+++|+|.++....++..         +.      .....|.+|.++|+|+|+.+
T Consensus       161 al~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~~v  240 (285)
T d1jtva_         161 ALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVF  240 (285)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHHHH
Confidence            9999999999999999999999999999999987654432110         00      11234667889999999999


Q ss_pred             ccccccc
Q psy14567        226 RWLLPSV  232 (238)
Q Consensus       226 ~~l~s~~  232 (238)
                      ++++++.
T Consensus       241 ~~~~~~~  247 (285)
T d1jtva_         241 LTALRAP  247 (285)
T ss_dssp             HHHHHCS
T ss_pred             HHHHhCC
Confidence            9998753

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=4.1e-44  Score=291.60  Aligned_cols=222  Identities=18%  Similarity=0.244  Sum_probs=190.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.+++++..++.     ....++++|++++++++++++.    ++
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            35688999999999999999999999999999999998766544332     4578899999999999877644    58


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|++|||||.....++.+.+.++ |...+.+|+...+.+.+...+.+......+.++.++|..+..+.++..+|+++|+
T Consensus       103 ~iDilvnnAg~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasKa  181 (294)
T d1w6ua_         103 HPNIVINNAAGNFISPTERLSPNA-WKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKA  181 (294)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             ccchhhhhhhhccccccccchhhh-hhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHHH
Confidence            999999999998888888888888 8999999999999999998888877665778999999998889999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-CCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      |+.+|+|+++.|++++|||||+|+||+++|++....... ++..+.....+|++|+++|+|+|+++.||+|+.
T Consensus       182 al~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~  254 (294)
T d1w6ua_         182 GVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDY  254 (294)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999997665433 345666778899999999999999999999984

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.5e-45  Score=291.17  Aligned_cols=221  Identities=21%  Similarity=0.228  Sum_probs=189.4

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhh---CCCEEEEecCChHhHHHHHhhC----C--CceEEEeecCCHHHHHHHHHhc
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQ---HEAIIIALSKTQANLDSLKQAF----P--NVQTVQVDLQDWARTRAAVSKV   79 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~---~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~v~~~~~~~   79 (238)
                      +...+|++|||||+|||+++|++|++   +|++|++++|++++++++.+++    +  ++..++||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            45678999999999999999999986   7999999999999887765543    3  4778999999999999887543


Q ss_pred             --------CCccEEEEccCCCC---CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEEccccccc
Q psy14567         80 --------GPVDVLINNAAVAR---FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK-IQGSIVNVSSIAGKT  147 (238)
Q Consensus        80 --------g~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~  147 (238)
                              +.+|++|||||...   ..++.+.+.++ |++++++|+.++++++++++|+|.+++ ..|+||++||..+..
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~-~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAE-VNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHH-HHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHH-HHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence                    46899999999764   34567788888 999999999999999999999998764 247999999999999


Q ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCC---CCCCCccCCcccCCCCCCcCCCCCcccc
Q psy14567        148 ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTG---WSDPAKAGPMLAKTPLGRFAGKLKPKPW  224 (238)
Q Consensus       148 ~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~r~~~~~~ia~~  224 (238)
                      +.++...|++||+|+.+|+++|+.|  ++|||||+|+||+++|+|.+..   ...++..+.+....|++|+++|+|+|+.
T Consensus       162 ~~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~  239 (259)
T d1oaaa_         162 PYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQK  239 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence            9999999999999999999999999  5699999999999999987532   2234445556666789999999999999


Q ss_pred             cccccccc
Q psy14567        225 NRWLLPSV  232 (238)
Q Consensus       225 ~~~l~s~~  232 (238)
                      ++||+++.
T Consensus       240 i~~ll~~~  247 (259)
T d1oaaa_         240 LLGLLQKD  247 (259)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHhhhc
Confidence            99999863

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-43  Score=280.57  Aligned_cols=219  Identities=21%  Similarity=0.258  Sum_probs=183.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHh----cCCccE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSK----VGPVDV   84 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~----~g~id~   84 (238)
                      .+.+|++||||++|||+++|++|+++|++|++++|+++.+++..++. .......+|+.+.+++++..+.    .+.+|.
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   82 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccc
Confidence            46678889999999999999999999999999999999888877665 4578889999998888766644    378999


Q ss_pred             EEEccCCCCC------CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCceEEEEccccccccCCCCc
Q psy14567         85 LINNAAVARF------DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH-----KIQGSIVNVSSIAGKTALEGHT  153 (238)
Q Consensus        85 li~~ag~~~~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~~~~  153 (238)
                      +++++++...      .+..+.+.++ |++++++|+.+++++++++.|++..+     ..+|+||++||..+..+.++..
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~  161 (248)
T d2o23a1          83 AVNCAGIAVASKTYNLKKGQTHTLED-FQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA  161 (248)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHH-HHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred             cccccccccCCCcccccccccchHHH-HHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCch
Confidence            9999876543      3344556676 99999999999999999999998654     1268999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCC-CCcCCCCCccccccccccc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPL-GRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~ia~~~~~l~s~  231 (238)
                      +|+++|+|+++|+|+++.|++++|||||+|+||+++|+|....  .++..+....+.|+ +|+++|+|||+++.||+|+
T Consensus       162 ~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~~R~g~peevA~~v~fL~s~  238 (248)
T d2o23a1         162 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN  238 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcC--CHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999997653  34455566677886 9999999999999999985

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1.1e-42  Score=276.80  Aligned_cols=213  Identities=20%  Similarity=0.151  Sum_probs=174.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHH---HHHhhCC--CceEEEeecC-CHHHHHHHHH----hc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLD---SLKQAFP--NVQTVQVDLQ-DWARTRAAVS----KV   79 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~--~~~~~~~D~~-~~~~v~~~~~----~~   79 (238)
                      .+.++++||||++|||+++|++|+++|++|++++|+.++.+   ++....+  ++.++.+|++ +.++++++++    ++
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            35678999999999999999999999999999888765443   3444444  4788899998 6667766664    45


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCceEEEEccccccccCCCCchhhH
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK--IQGSIVNVSSIAGKTALEGHTIYSA  157 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~y~~  157 (238)
                      |++|+||||||...        .++ |++++++|+.+++.++++++|.|.+++  ..|+||+++|..+..+.++..+|++
T Consensus        83 g~iDilvnnAG~~~--------~~~-~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~a  153 (254)
T d1sbya1          83 KTVDILINGAGILD--------DHQ-IERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSA  153 (254)
T ss_dssp             SCCCEEEECCCCCC--------TTC-HHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHH
T ss_pred             CCCCEEEeCCCCCC--------HHH-HHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHH
Confidence            99999999999653        344 899999999999999999999998763  3589999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ||+|+.+|+++|+.+++++|||||+|+||+++|+|.+.....++..+.+......++..+|+++|+.++++++.
T Consensus       154 sKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~  227 (254)
T d1sbya1         154 SKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhC
Confidence            99999999999999999999999999999999998765433333333333333444567899999988877655

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-40  Score=265.58  Aligned_cols=218  Identities=14%  Similarity=0.129  Sum_probs=185.9

Q ss_pred             CcCCCCCCCCCC--chHHHHHHHHhhCCCEEEEecCChHhH---HHHHhhCCCceEEEeecCCHHHHHHHHHh----cCC
Q psy14567         11 RTNTKGGDYPKP--GIGRCIVEKLSQHEAIIIALSKTQANL---DSLKQAFPNVQTVQVDLQDWARTRAAVSK----VGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~--gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~D~~~~~~v~~~~~~----~g~   81 (238)
                      +.++++||||+|  |||+++|+.|+++|++|++++|+++..   ++.....+....+.+|+++.+++.+.+++    .++
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   83 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence            567888899999  899999999999999999999986543   34455556788889999999888776654    488


Q ss_pred             ccEEEEccCCCCCCCCC-----CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhh
Q psy14567         82 VDVLINNAAVARFDRFL-----DIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYS  156 (238)
Q Consensus        82 id~li~~ag~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  156 (238)
                      +|++|||++........     +...+. |...+++|+.+.+.+++.+.+.+.+   ++.|+++||..+..+.+....|+
T Consensus        84 ~d~~v~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Ii~iss~~~~~~~~~~~~Y~  159 (258)
T d1qsga_          84 FDGFVHSIGFAPGDQLDGDYVNAVTREG-FKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERAIPNYNVMG  159 (258)
T ss_dssp             EEEEEECCCCCCGGGGSSCHHHHCCHHH-HHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTTTHHH
T ss_pred             cceEEEeecccccccccccccccchHHH-HHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEecchhhccCCCCcHHHH
Confidence            99999999886543322     233344 8899999999999999999998854   45799999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        157 ASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ++|+|+++|+|+++.|++++|||||+|+||+++|++........+..+......|++|+++|+|+|+++.||+|+.
T Consensus       160 ~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~  235 (258)
T d1qsga_         160 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDL  235 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999998776555566667778899999999999999999999984

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-41  Score=269.14  Aligned_cols=197  Identities=21%  Similarity=0.178  Sum_probs=164.4

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhC-CCEEEEecCChHhHHHH----HhhCCCceEEEeecCCHHHHHHHHHhc----CCc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQH-EAIIIALSKTQANLDSL----KQAFPNVQTVQVDLQDWARTRAAVSKV----GPV   82 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~----~~~~~~~~~~~~D~~~~~~v~~~~~~~----g~i   82 (238)
                      .+|++||||++|||+++|++|++. |++|++++|+.++++++    .+..+++.+++||++|.++++++++++    |++
T Consensus         3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i   82 (275)
T d1wmaa1           3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL   82 (275)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            467899999999999999999985 89999999999887654    444567999999999999998877554    899


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC-------------
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL-------------  149 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------------  149 (238)
                      |+||||||+....+..+.+.++ |+..+++|+.+++.+++.++|+|++   .|+||+++|..+..+.             
T Consensus        83 DiLVnNAGi~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~lp~m~~---~g~ivnisS~~~~~~~~~~~~y~~~k~~~  158 (275)
T d1wmaa1          83 DVLVNNAGIAFKVADPTPFHIQ-AEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQKFRS  158 (275)
T ss_dssp             EEEEECCCCCCCTTCCSCHHHH-HHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred             EEEEEcCCcCCCCCcccCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHh---cCCcccccccceeccccccchhhhhhhcc
Confidence            9999999998777777777777 9999999999999999999999964   4799999997653221             


Q ss_pred             ----------------------------CCCchhhHHHHHHHHHHHHHHHHhCC----CCeEEEEEeCCceecCcccCCC
Q psy14567        150 ----------------------------EGHTIYSASKAALDSITRTMALELGP----YNIRVNSVQPTVVMTQMGRTGW  197 (238)
Q Consensus       150 ----------------------------~~~~~y~~sK~al~~l~~~l~~~~~~----~~i~v~~i~PG~v~t~~~~~~~  197 (238)
                                                  .+..+|++||+++.+|++.++.++++    .||+||+|+||+++|+|.... 
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~-  237 (275)
T d1wmaa1         159 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK-  237 (275)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT-
T ss_pred             cccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc-
Confidence                                        12357999999999999999988754    599999999999999996532 


Q ss_pred             CCCCccCCcccCCCCCCcCCCCCccccccccc
Q psy14567        198 SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLL  229 (238)
Q Consensus       198 ~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~  229 (238)
                                      ...+|+|.|+.++|++
T Consensus       238 ----------------~~~~pee~A~~~~~~a  253 (275)
T d1wmaa1         238 ----------------ATKSPEEGAETPVYLA  253 (275)
T ss_dssp             ----------------CSBCHHHHTHHHHHHH
T ss_pred             ----------------ccCCHHHHHHHHHHHH
Confidence                            1236777887777765

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=3.1e-39  Score=256.39  Aligned_cols=184  Identities=23%  Similarity=0.332  Sum_probs=159.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHh---hCCCEEEEecCChHhHHHH---HhhCCCceEEEeecCCHHHHHHHHHhc-----
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLS---QHEAIIIALSKTQANLDSL---KQAFPNVQTVQVDLQDWARTRAAVSKV-----   79 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~---~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~D~~~~~~v~~~~~~~-----   79 (238)
                      .|++++|||||+|||+++|++|+   ++|++|++++|++++++++   .+..+++.+++||++|+++++++++++     
T Consensus         1 ~MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           1 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK   80 (248)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence            36889999999999999999995   5799999999998875554   445568999999999999998887643     


Q ss_pred             -CCccEEEEccCCCCCC-CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------CCceEEEEccccccc
Q psy14567         80 -GPVDVLINNAAVARFD-RFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK----------IQGSIVNVSSIAGKT  147 (238)
Q Consensus        80 -g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----------~~g~iv~isS~~~~~  147 (238)
                       +++|++|||||+.... +..+.+.++ |++++++|+.+++.++++++|+|+++.          ..|++|+++|..+..
T Consensus        81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~  159 (248)
T d1snya_          81 DQGLNVLFNNAGIAPKSARITAVRSQE-LLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSI  159 (248)
T ss_dssp             GGCCSEEEECCCCCCCCCCGGGCCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCS
T ss_pred             cCCcceEEeeccccccCcccccCCHHH-HHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence             7899999999986554 566778887 999999999999999999999998742          258999999998765


Q ss_pred             c---CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccC
Q psy14567        148 A---LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT  195 (238)
Q Consensus       148 ~---~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~  195 (238)
                      .   .++..+|++||+|+.+|+++++.+++++||+||+|+||+++|+|...
T Consensus       160 ~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~  210 (248)
T d1snya_         160 QGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS  210 (248)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccc
Confidence            3   45677999999999999999999999999999999999999999754

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=6.9e-40  Score=265.08  Aligned_cols=218  Identities=25%  Similarity=0.269  Sum_probs=171.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC-hHhHHHHHhh----CC-Cce-----------------EEEeecC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT-QANLDSLKQA----FP-NVQ-----------------TVQVDLQ   67 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~----~~-~~~-----------------~~~~D~~   67 (238)
                      ++.|++||||++|||+++|++|+++|++|++++|+ ++..+++.++    .+ ...                 .+.+|++
T Consensus         1 ~~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~   80 (284)
T d1e7wa_           1 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT   80 (284)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCC
Confidence            35789999999999999999999999999987664 4445444332    22 122                 3456799


Q ss_pred             CHHHHHHHHHh----cCCccEEEEccCCCCCCCCCCCChHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy14567         68 DWARTRAAVSK----VGPVDVLINNAAVARFDRFLDIDEEN-------------LIDSIFDVNIKAVINISQVVSKTMID  130 (238)
Q Consensus        68 ~~~~v~~~~~~----~g~id~li~~ag~~~~~~~~~~~~~~-------------~~~~~~~~n~~~~~~~~~~~~~~~~~  130 (238)
                      +++++++++++    +|++|++|||||+..+.++.+.+.++             .+...+++|+.+++++.+.+.+.+..
T Consensus        81 ~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  160 (284)
T d1e7wa_          81 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  160 (284)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence            99998887754    59999999999998777766655443             13457899999999999999887643


Q ss_pred             -----ccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCC
Q psy14567        131 -----HKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGP  205 (238)
Q Consensus       131 -----~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~  205 (238)
                           ++..++|++++|..+..+.++..+|+++|+|+.+|+|+++.|++++|||||+|+||++.+...    ..++..+.
T Consensus       161 ~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~----~~~~~~~~  236 (284)
T d1e7wa_         161 TPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD----MPPAVWEG  236 (284)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG----SCHHHHHH
T ss_pred             hHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc----CCHHHHHH
Confidence                 223578999999999999999999999999999999999999999999999999998655432    13344555


Q ss_pred             cccCCCC-CCcCCCCCcccccccccccc
Q psy14567        206 MLAKTPL-GRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       206 ~~~~~~~-~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ...+.|+ +|+++|+|+|+++.||+|+.
T Consensus       237 ~~~~~pl~~R~~~peeiA~~v~fL~S~~  264 (284)
T d1e7wa_         237 HRSKVPLYQRDSSAAEVSDVVIFLCSSK  264 (284)
T ss_dssp             HHTTCTTTTSCBCHHHHHHHHHHHHSGG
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHHHhCch
Confidence            6667775 99999999999999999974

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-39  Score=259.14  Aligned_cols=183  Identities=21%  Similarity=0.249  Sum_probs=164.5

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeecCCHHHHHHHHHh----cC
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVSK----VG   80 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~----~g   80 (238)
                      .+.++++|||||+|||+++|++|+++|++|++++|++++++++.++.     .....+.+|.++.+++....+.    +|
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            46678999999999999999999999999999999999988776543     3477889999999888776654    48


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      .+|++++|||.....++.+.+.++ |++++++|+.+++.+++.++|+|+++  +|+||++||.++..+.++..+|++||+
T Consensus        92 ~~~~li~nag~~~~~~~~~~~~~~-~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~~~~~~~p~~~~Y~asKa  168 (269)
T d1xu9a_          92 GLDMLILNHITNTSLNLFHDDIHH-VRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKVAYPMVAAYSASKF  168 (269)
T ss_dssp             SCSEEEECCCCCCCCCCCCSCHHH-HHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred             CccccccccccccccccccCCHHH-hhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccchhcCCCCCchHHHHHHH
Confidence            999999999998888888888888 99999999999999999999999754  589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC--CCeEEEEEeCCceecCcccC
Q psy14567        161 ALDSITRTMALELGP--YNIRVNSVQPTVVMTQMGRT  195 (238)
Q Consensus       161 al~~l~~~l~~~~~~--~~i~v~~i~PG~v~t~~~~~  195 (238)
                      |+++|+++|+.|+++  .||+||+|+||+++|+|..+
T Consensus       169 al~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~  205 (269)
T d1xu9a_         169 ALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK  205 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHH
Confidence            999999999999964  57999999999999998654

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=8.3e-39  Score=254.23  Aligned_cols=184  Identities=25%  Similarity=0.287  Sum_probs=152.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhCC-CceEEEeecCCHHHHHHHHHhc----C--C
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFP-NVQTVQVDLQDWARTRAAVSKV----G--P   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~----g--~   81 (238)
                      +.++++||||++|||+++|++|+++|+  +|++++|+.++++++.+..+ ++.++++|++++++++++++++    +  +
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~   81 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence            458899999999999999999999996  78999999999988877654 5889999999999998888654    3  4


Q ss_pred             ccEEEEccCCCC-CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------CCceEEEEcccccccc--
Q psy14567         82 VDVLINNAAVAR-FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK----------IQGSIVNVSSIAGKTA--  148 (238)
Q Consensus        82 id~li~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----------~~g~iv~isS~~~~~~--  148 (238)
                      +|++|||||+.. ..+..+.+.++ |++.+++|+.+++.+++.++|+|++++          ..++++++++..+...  
T Consensus        82 idilinnAG~~~~~~~~~~~~~~~-~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~  160 (250)
T d1yo6a1          82 LSLLINNAGVLLSYGTNTEPNRAV-IAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN  160 (250)
T ss_dssp             CCEEEECCCCCCCBCTTSCCCHHH-HHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred             eEEEEEcCcccCCCCccccCCHHH-HHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence            999999999764 35667778887 999999999999999999999998753          1368899888765442  


Q ss_pred             -----CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccC
Q psy14567        149 -----LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRT  195 (238)
Q Consensus       149 -----~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~  195 (238)
                           ..+..+|++||+|+.+|+++++.|++++||+||+|+||+++|+|..+
T Consensus       161 ~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~  212 (250)
T d1yo6a1         161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK  212 (250)
T ss_dssp             CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------
T ss_pred             cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC
Confidence                 22345799999999999999999999999999999999999999653

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-39  Score=257.35  Aligned_cols=209  Identities=21%  Similarity=0.236  Sum_probs=171.7

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc---CCccEEEEc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV---GPVDVLINN   88 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~---g~id~li~~   88 (238)
                      +||++||||++|||+++|++|+++|++|++++|+++.        .+....++|+++.....++....   ...+.++.+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG--------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSA   72 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS--------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc--------ccceEeeccccchhhhHHHHHhhhccccccchhhh
Confidence            4789999999999999999999999999999998753        25667899999998887766443   456777777


Q ss_pred             cCCCCC----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCceEEEEccccccccCCCCchhhHHH
Q psy14567         89 AAVARF----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH-----KIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        89 ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      ++....    ......+.+. |++.+++|+.+.+.+++.+.+.+.+.     +..|+||++||..+..+.++..+|+++|
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  151 (241)
T d1uaya_          73 AGVGLAEKILGKEGPHGLES-FRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASK  151 (241)
T ss_dssp             CCCCCCCCSBCSSSBCCHHH-HHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             hhccccccccccccchhHHH-HHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHH
Confidence            765432    2333445566 89999999999999999999985432     1268999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCC-CCCcCCCCCccccccccccc
Q psy14567        160 AALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTP-LGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       160 ~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +|+.+|+|+++.|++++|||||+|+||+++|++.....  ++..+....+.| .+|+++|+|+|+++.||+|+
T Consensus       152 aal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~--~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s~  222 (241)
T d1uaya_         152 GGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP--EKAKASLAAQVPFPPRLGRPEEYAALVLHILEN  222 (241)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC--HHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh--hhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999976532  222233334445 49999999999999999986

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.5e-39  Score=254.24  Aligned_cols=202  Identities=12%  Similarity=0.049  Sum_probs=166.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc------CCccEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV------GPVDVL   85 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~------g~id~l   85 (238)
                      .++++||||++|||+++|++|+++|++|+++++++...      ........+|.++.++.+.+.+.+      +++|++
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~l   75 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI   75 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------ccccceeecccCcHHHHHHHHHHHHHHhCCCCceEE
Confidence            57889999999999999999999999999998876431      122345567777776665554332      479999


Q ss_pred             EEccCCCCCCC-CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHH
Q psy14567         86 INNAAVARFDR-FLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDS  164 (238)
Q Consensus        86 i~~ag~~~~~~-~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~  164 (238)
                      |||||.+.... ..+.+.++ |++++++|+.+++.++++++|+|++   +|+||++||..+..+.++..+|++||+|+.+
T Consensus        76 InnAG~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~  151 (236)
T d1dhra_          76 LCVAGGWAGGNAKSKSLFKN-CDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQ  151 (236)
T ss_dssp             EECCCCCCCBCTTCTTHHHH-HHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred             EECCcccccccchhcCCHHH-HHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccHHHcCCccCCcccHHHHHHHHH
Confidence            99999765544 44444565 9999999999999999999999964   4899999999999999999999999999999


Q ss_pred             HHHHHHHHhC--CCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        165 ITRTMALELG--PYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       165 l~~~l~~~~~--~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      |+++++.|++  ++|||||+|+||+++|+|.++.....          +.+++.+|+++|+.+.||+++..
T Consensus       152 lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~----------~~~~~~~pe~va~~~~~l~s~~~  212 (236)
T d1dhra_         152 LCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA----------DFSSWTPLEFLVETFHDWITGNK  212 (236)
T ss_dssp             HHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS----------CGGGSEEHHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccc----------hhhcCCCHHHHHHHHHHHhCCCc
Confidence            9999999998  57999999999999999976533221          34567789999999999998743

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=7.8e-40  Score=269.90  Aligned_cols=218  Identities=19%  Similarity=0.170  Sum_probs=169.7

Q ss_pred             CcCCCCCCC--CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh----hC------------CCceEEEe--------
Q psy14567         11 RTNTKGGDY--PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ----AF------------PNVQTVQV--------   64 (238)
Q Consensus        11 ~~~v~~itG--~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~------------~~~~~~~~--------   64 (238)
                      +.+|++|||  +++|||+++|+.|+++|++|++++++.........    ..            .......+        
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            357899999  66899999999999999999999887654332211    01            11223333        


Q ss_pred             ------------ecCCHHHHHHHH----HhcCCccEEEEccCCCCC--CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14567         65 ------------DLQDWARTRAAV----SKVGPVDVLINNAAVARF--DRFLDIDEENLIDSIFDVNIKAVINISQVVSK  126 (238)
Q Consensus        65 ------------D~~~~~~v~~~~----~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  126 (238)
                                  |+++.+++++++    +++|++|++|||+|....  .++.+.+.++ |++.+++|+++.+.++|+++|
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~-~~~~~~vn~~~~~~~~k~~~~  159 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKG-YLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhh-hhhhcccchhHHHHHHHHHHh
Confidence                        444544444444    556999999999997653  4677888888 999999999999999999999


Q ss_pred             HHHhccCCceEEEEccccccccCCC-CchhhHHHHHHHHHHHHHHHHhCC-CCeEEEEEeCCceecCcccCCC-------
Q psy14567        127 TMIDHKIQGSIVNVSSIAGKTALEG-HTIYSASKAALDSITRTMALELGP-YNIRVNSVQPTVVMTQMGRTGW-------  197 (238)
Q Consensus       127 ~~~~~~~~g~iv~isS~~~~~~~~~-~~~y~~sK~al~~l~~~l~~~~~~-~~i~v~~i~PG~v~t~~~~~~~-------  197 (238)
                      +|.+   +|+||++||..+..+.++ ...|+++|+|+++|+|+++.|+++ +|||||+|+||+++|++.+...       
T Consensus       160 ~m~~---~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~  236 (329)
T d1uh5a_         160 IMKP---QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYE  236 (329)
T ss_dssp             GEEE---EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC-------
T ss_pred             hccc---ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhh
Confidence            9954   479999999999888776 467899999999999999999986 5999999999999995432110       


Q ss_pred             ------------------------------------CCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        198 ------------------------------------SDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       198 ------------------------------------~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                                                          ..++..+...+..|++|+++|+|||++++||+|+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~  307 (329)
T d1uh5a_         237 NNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRE  307 (329)
T ss_dssp             -----------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGG
T ss_pred             hhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCch
Confidence                                                01122334456689999999999999999999984

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=9.4e-39  Score=257.24  Aligned_cols=222  Identities=14%  Similarity=0.093  Sum_probs=169.8

Q ss_pred             CcCCCCCCCCCC--chHHHHHHHHhhCCCEEEEecCChH---hHHHHHhhCCCceEEEeecCCHHHHHHHHH----hcCC
Q psy14567         11 RTNTKGGDYPKP--GIGRCIVEKLSQHEAIIIALSKTQA---NLDSLKQAFPNVQTVQVDLQDWARTRAAVS----KVGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~--gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~----~~g~   81 (238)
                      +.++++||||+|  |||+++|++|+++|++|++++|+++   ..+++.+..+...++++|++++++++++++    .+|+
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~   83 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   83 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCC
Confidence            567889999765  9999999999999999999999874   466677777788899999999999877764    4599


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHH
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAA  161 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~a  161 (238)
                      +|++|+|+|........+...++.+......+....+.............+..+.|+++++.....+.+....|+++|+|
T Consensus        84 id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~asK~a  163 (274)
T d2pd4a1          84 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAA  163 (274)
T ss_dssp             EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHHH
T ss_pred             CCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHHHHH
Confidence            99999999987554333322222123322233332332333333222223323456667777767778888999999999


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +.+++|+++.|++++|||||+|+||+++|++.....+.++.........|++|+++|+|||+++.||+|+.
T Consensus       164 l~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~  234 (274)
T d2pd4a1         164 LESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSL  234 (274)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChh
Confidence            99999999999999999999999999999998776555566666667889999999999999999999984

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.1e-37  Score=243.88  Aligned_cols=197  Identities=13%  Similarity=0.031  Sum_probs=158.3

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHH------hcCCccEEEEc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS------KVGPVDVLINN   88 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~------~~g~id~li~~   88 (238)
                      ++||||++|||+++|++|+++|++|++++|+++..      ......+.+|+.+.++.....+      +.|++|++|||
T Consensus         5 VlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linn   78 (235)
T d1ooea_           5 VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCV   78 (235)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------ccccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence            48999999999999999999999999999987532      1123344566666655443332      34889999999


Q ss_pred             cCCCCCCCC-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHH
Q psy14567         89 AAVARFDRF-LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITR  167 (238)
Q Consensus        89 ag~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~  167 (238)
                      ||++..... .+.+.++ |+.++++|+.+++.++++++|+|++   +|+|+++||..+..+.++..+|++||+|+.+|++
T Consensus        79 AG~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~  154 (235)
T d1ooea_          79 AGGWAGGSASSKDFVKN-ADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTS  154 (235)
T ss_dssp             CCCCCCBCTTSTTHHHH-HHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHH
T ss_pred             CcccccccccccCcHHH-HhhHhhhHHHHHHHHhhhccccccc---ceEEEEeccHHhcCCcccccchHHHHHHHHHHHH
Confidence            998755443 3344455 9999999999999999999999964   4799999999999999999999999999999999


Q ss_pred             HHHHHhC--CCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        168 TMALELG--PYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       168 ~l~~~~~--~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      +++.|++  +.+|+||+|+||+++|+|.+.....          .+..++.+|+++++.+.+++++
T Consensus       155 ~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~----------~~~~~~~~~~~va~~~~~~l~~  210 (235)
T d1ooea_         155 SLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLSFISEHLLKWTTE  210 (235)
T ss_dssp             HHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCHHHHHHHHHHHHHC
T ss_pred             HHHHHhccCCCceEEEEEecCcCcCcchhhhCcC----------CccccCCCHHHHHHHHHHHhcC
Confidence            9999998  5799999999999999997653322          1235677899999998755544

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1.6e-37  Score=252.67  Aligned_cols=219  Identities=16%  Similarity=0.121  Sum_probs=171.1

Q ss_pred             CCcCCCCCCCCCC--chHHHHHHHHhhCCCEEEEecCChHhHHHHHh---hC-------C-----C-ceEEEeec-----
Q psy14567         10 DRTNTKGGDYPKP--GIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ---AF-------P-----N-VQTVQVDL-----   66 (238)
Q Consensus        10 ~~~~v~~itG~s~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~-------~-----~-~~~~~~D~-----   66 (238)
                      .+.++++||||+|  |||+++|++|+++|++|++++|+.........   ..       .     + -....+|.     
T Consensus         6 L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (297)
T d1d7oa_           6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP   85 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcccc
Confidence            4667889999876  99999999999999999999997643221111   00       0     0 12333332     


Q ss_pred             ---------------CCH----HHHHHHHHhcCCccEEEEccCCCC--CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHH
Q psy14567         67 ---------------QDW----ARTRAAVSKVGPVDVLINNAAVAR--FDRFLDIDEENLIDSIFDVNIKAVINISQVVS  125 (238)
Q Consensus        67 ---------------~~~----~~v~~~~~~~g~id~li~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~  125 (238)
                                     ++.    +-++.+.+++|++|++|||||...  ..++.+.+.++ |++.+++|+.+++.++++++
T Consensus        86 ~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~-~~~~~~vn~~~~~~~~~~~~  164 (297)
T d1d7oa_          86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKG-YLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHG
T ss_pred             ccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhccc-ccccccchhhhhhhhhhHHH
Confidence                           121    223445566799999999999764  35677888888 99999999999999999999


Q ss_pred             HHHHhccCCceEEEEccccccc-cCCCCchhhHHHHHHHHHHHHHHHHhC-CCCeEEEEEeCCceecCcccCCCCCCCcc
Q psy14567        126 KTMIDHKIQGSIVNVSSIAGKT-ALEGHTIYSASKAALDSITRTMALELG-PYNIRVNSVQPTVVMTQMGRTGWSDPAKA  203 (238)
Q Consensus       126 ~~~~~~~~~g~iv~isS~~~~~-~~~~~~~y~~sK~al~~l~~~l~~~~~-~~~i~v~~i~PG~v~t~~~~~~~~~~~~~  203 (238)
                      |.+.++   +.++.+++..... ..+....|+++|+++.++++.++.+++ ++|||||+|+||+++|++.+.....++..
T Consensus       165 ~~~~~~---g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~  241 (297)
T d1d7oa_         165 PIMNPG---GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMI  241 (297)
T ss_dssp             GGEEEE---EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHH
T ss_pred             HHhhcC---CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHH
Confidence            887653   5666666665544 456778999999999999999999996 67999999999999999987654455666


Q ss_pred             CCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        204 GPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       204 ~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      +......|++|+++|+|||++++||+|+.
T Consensus       242 ~~~~~~~PlgR~~~peevA~~v~fL~S~~  270 (297)
T d1d7oa_         242 EYSYNNAPIQKTLTADEVGNAAAFLVSPL  270 (297)
T ss_dssp             HHHHHHSSSCCCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCch
Confidence            67778899999999999999999999984

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=8.4e-37  Score=244.58  Aligned_cols=216  Identities=22%  Similarity=0.237  Sum_probs=168.3

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-HHH----HHhhC-CCceEEEeecCC----HHHHHHHH----Hh
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-LDS----LKQAF-PNVQTVQVDLQD----WARTRAAV----SK   78 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~----~~~~~-~~~~~~~~D~~~----~~~v~~~~----~~   78 (238)
                      .|++||||++|||+++|++|+++|++|++++|+.++ .++    +.+.. ......++|..+    ++.+++++    ++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999998654 333    33332 245556665544    44454444    46


Q ss_pred             cCCccEEEEccCCCCCCCCCCC----------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----CCceEEEEcccc
Q psy14567         79 VGPVDVLINNAAVARFDRFLDI----------DEENLIDSIFDVNIKAVINISQVVSKTMIDHK----IQGSIVNVSSIA  144 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~~~~~----------~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~g~iv~isS~~  144 (238)
                      +|++|++|||||+..+.+..+.          ..+..+...+.+|+.+.+...+...+.+....    ..+.++++++..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            6999999999998765443322          11223777888999999988888877765432    256888999999


Q ss_pred             ccccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCc-CCCCCccc
Q psy14567        145 GKTALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRF-AGKLKPKP  223 (238)
Q Consensus       145 ~~~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~-~~~~~ia~  223 (238)
                      +..+.++...|++||+|+++++++++.+++++|||||+|+||+++|++..    .++..+.+.+++|++|. ++|+|+|+
T Consensus       162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~----~~~~~~~~~~~~pl~r~~~~peeva~  237 (266)
T d1mxha_         162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM----PQETQEEYRRKVPLGQSEASAAQIAD  237 (266)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS----CHHHHHHHHTTCTTTSCCBCHHHHHH
T ss_pred             ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC----CHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999999999998753    34455567778899765 89999999


Q ss_pred             ccccccccc
Q psy14567        224 WNRWLLPSV  232 (238)
Q Consensus       224 ~~~~l~s~~  232 (238)
                      +++||+|+.
T Consensus       238 ~v~fL~s~~  246 (266)
T d1mxha_         238 AIAFLVSKD  246 (266)
T ss_dssp             HHHHHHSGG
T ss_pred             HHHHHhCch
Confidence            999999984

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=2.2e-37  Score=248.39  Aligned_cols=217  Identities=14%  Similarity=0.152  Sum_probs=174.3

Q ss_pred             CcCCCCCCC--CCCchHHHHHHHHhhCCCEEEEecCChHhH-HHHHhhCC-CceEEEeecCCHHHHHHHHHhc-------
Q psy14567         11 RTNTKGGDY--PKPGIGRCIVEKLSQHEAIIIALSKTQANL-DSLKQAFP-NVQTVQVDLQDWARTRAAVSKV-------   79 (238)
Q Consensus        11 ~~~v~~itG--~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~-------   79 (238)
                      +.++++|||  +++|||+++|++|+++|++|++++|++++. +++.++.+ +...++||++++++++++++.+       
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~   84 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   84 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccC
Confidence            456788999  467999999999999999999999998775 44555543 4778899999998887766443       


Q ss_pred             CCccEEEEccCCCCC-----CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCch
Q psy14567         80 GPVDVLINNAAVARF-----DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTI  154 (238)
Q Consensus        80 g~id~li~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  154 (238)
                      +++|+++||+|+...     .++.+.+.++ |.+.+++|+...+...+.+.+.+.    ++.+++++|.....+.++...
T Consensus        85 ~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~s~~~~~~~p~~~~  159 (268)
T d2h7ma1          85 NKLDGVVHSIGFMPQTGMGINPFFDAPYAD-VSKGIHISAYSYASMAKALLPIMN----PGGSIVGMDFDPSRAMPAYNW  159 (268)
T ss_dssp             CCEEEEEECCCCCCGGGSTTSCGGGCCHHH-HHHHHHHHTHHHHHHHHHHGGGEE----EEEEEEEEECCCSSCCTTTHH
T ss_pred             CCcceeeecccccCccccccccccccchhh-hhhhhhhhhhHHHHHHHHHhhhcc----cccccccccccccccCcccch
Confidence            689999999997643     2345566676 899999999999988888876543    345666667777788888999


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC----------CCccCCcccCCCCCC-cCCCCCccc
Q psy14567        155 YSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD----------PAKAGPMLAKTPLGR-FAGKLKPKP  223 (238)
Q Consensus       155 y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~----------~~~~~~~~~~~~~~r-~~~~~~ia~  223 (238)
                      |+++|+|+.+|+|+++.|++++|||||+|+||+++|++.......          +...+....+.|++| +++|+|+|+
T Consensus       160 y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~  239 (268)
T d2h7ma1         160 MTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAK  239 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHH
T ss_pred             hhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            999999999999999999999999999999999999986532211          122334456688876 999999999


Q ss_pred             ccccccccc
Q psy14567        224 WNRWLLPSV  232 (238)
Q Consensus       224 ~~~~l~s~~  232 (238)
                      ++.||+|+.
T Consensus       240 ~v~fL~Sd~  248 (268)
T d2h7ma1         240 TVCALLSDW  248 (268)
T ss_dssp             HHHHHHSSS
T ss_pred             HHHHHhCch
Confidence            999999974

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=3.5e-36  Score=239.84  Aligned_cols=199  Identities=21%  Similarity=0.256  Sum_probs=145.9

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-----CCccEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-----GPVDVLI   86 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-----g~id~li   86 (238)
                      |+|++||||++|||+++|++|+++|++|++++|++++             ..+|+++.+..+......     +.+|+++
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv   67 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------VIADLSTAEGRKQAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------EECCTTSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEE
Confidence            6899999999999999999999999999999998643             357888887776554322     5799999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccc---------------------
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAG---------------------  145 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~---------------------  145 (238)
                      +|||+....       +. +.....+|..+...+.+...+.+.+.. ...+..+++...                     
T Consensus        68 ~~Ag~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  138 (257)
T d1fjha_          68 LCAGLGPQT-------KV-LGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAK  138 (257)
T ss_dssp             ECCCCCTTC-------SS-HHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHH
T ss_pred             EcCCCCCcH-------HH-HHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhccCCcEEE
Confidence            999976432       11 677788999999999999999887765 445555544322                     


Q ss_pred             ------ccc-CCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcc-cCCCCCCcCC
Q psy14567        146 ------KTA-LEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPML-AKTPLGRFAG  217 (238)
Q Consensus       146 ------~~~-~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~-~~~~~~r~~~  217 (238)
                            ..+ .++..+|++||+|+++|+|+++.|++++|||||+|+||+++|++.+..+..++..+... ...|++|+++
T Consensus       139 i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~g~  218 (257)
T d1fjha_         139 ARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRAE  218 (257)
T ss_dssp             HHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCCC
T ss_pred             EeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCCcC
Confidence                  111 12345799999999999999999999999999999999999999887665555544433 3469999999


Q ss_pred             CCCcccccccccccc
Q psy14567        218 KLKPKPWNRWLLPSV  232 (238)
Q Consensus       218 ~~~ia~~~~~l~s~~  232 (238)
                      |+|||+++.||+|+.
T Consensus       219 p~eva~~v~fL~S~~  233 (257)
T d1fjha_         219 PSEMASVIAFLMSPA  233 (257)
T ss_dssp             THHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHhCch
Confidence            999999999999985

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=2.7e-31  Score=211.64  Aligned_cols=204  Identities=15%  Similarity=0.108  Sum_probs=157.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHh-------HHHHHhhCCCceEEEeecCCHHHHHHHHHhc---C
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQAN-------LDSLKQAFPNVQTVQVDLQDWARTRAAVSKV---G   80 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~-------~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~---g   80 (238)
                      ..|++||||++|||+++|++|+++|+ +|++++|+..+       .+++.+....+.++.||++|+++++++++++   +
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~   88 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV   88 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence            45899999999999999999999998 68999987432       3344444456899999999999999999876   5


Q ss_pred             CccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHH
Q psy14567         81 PVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKA  160 (238)
Q Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~  160 (238)
                      ++|.+|||+|.....++.+.+.++ |+..+++|+.+.+++.+.+.    ..+ .++||++||..+..+.++...|+++|+
T Consensus        89 ~i~~vv~~ag~~~~~~~~~~~~~~-~~~~~~~~~~g~~~l~~~~~----~~~-~~~iv~~SS~a~~~g~~~~~~YaAaka  162 (259)
T d2fr1a1          89 PLSAVFHAAATLDDGTVDTLTGER-IERASRAKVLGARNLHELTR----ELD-LTAFVLFSSFASAFGAPGLGGYAPGNA  162 (259)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHH-HHHHTHHHHHHHHHHHHHHT----TSC-CSEEEEEEEHHHHTCCTTCTTTHHHHH
T ss_pred             cccccccccccccccccccccHHH-HHHHhhhhccchhHHHHHhh----ccC-CceEeeecchhhccCCcccHHHHHHHH
Confidence            799999999999888898999888 99999999999998877643    333 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        161 ALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       161 al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      ++++|++.++.    .|+++++|+||.+.++.....    ...+. .....+ +..+|++.++.+..++..
T Consensus       163 ~l~~la~~~~~----~Gi~v~~I~pg~~~~~g~~~~----~~~~~-~~~~G~-~~~~~~~~~~~l~~~l~~  223 (259)
T d2fr1a1         163 YLDGLAQQRRS----DGLPATAVAWGTWAGSGMAEG----PVADR-FRRHGV-IEMPPETACRALQNALDR  223 (259)
T ss_dssp             HHHHHHHHHHH----TTCCCEEEEECCBC-----------------CTTTTE-ECBCHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHh----CCCCEEECCCCcccCCccccc----hHHHH-HHhcCC-CCCCHHHHHHHHHHHHhC
Confidence            99998877654    489999999999876532211    11111 111111 124677777777766654

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=1.9e-18  Score=142.75  Aligned_cols=169  Identities=12%  Similarity=0.031  Sum_probs=126.1

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH-----hHHHHHh----hCCCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA-----NLDSLKQ----AFPNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~----~~~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      ++++||||||.||++++++|++.|++|+.++|..+     +++.+..    ..+++.++++|++|.+++++.++.. ++|
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~d   80 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV-QPD   80 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH-CCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc-CCC
Confidence            57889999999999999999999999999998543     2332222    2246899999999999999999876 589


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-----c------cCCCC
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-----T------ALEGH  152 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----~------~~~~~  152 (238)
                      +++|+|+.......    .++ ....+++|+.++..+++++...-.++  ..++|++||....     .      +..+.
T Consensus        81 ~v~h~aa~~~~~~~----~~~-~~~~~~~Nv~gt~nllea~~~~~~~~--~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~  153 (357)
T d1db3a_          81 EVYNLGAMSHVAVS----FES-PEYTADVDAMGTLRLLEAIRFLGLEK--KTRFYQASTSELYGLVQEIPQKETTPFYPR  153 (357)
T ss_dssp             EEEECCCCCTTTTT----TSC-HHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGGGGTTCCSSSBCTTSCCCCC
T ss_pred             EEEEeecccccchh----hhC-HHHHHHHHHHHHHHHHHHHHHhCCCC--CcEEEEEEchhhhCCCCCCCcCCCCCCCCC
Confidence            99999998653321    122 35568999999999999986543222  3579999986421     1      12346


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      ..|+.+|.+.+.+++.++..+   ++.+..+.|+.+..|.
T Consensus       154 ~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~  190 (357)
T d1db3a_         154 SPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPR  190 (357)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred             ChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCC
Confidence            789999999999999998875   5788889998888875

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.73  E-value=3.5e-20  Score=140.18  Aligned_cols=149  Identities=11%  Similarity=0.021  Sum_probs=105.9

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC---CceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP---NVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      .+.++++||||+||||+++++.|+++|++|++++|+.++++++.+.+.   ......+|+++.++++++++   ++|+||
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~iDili   97 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK---GAHFVF   97 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT---TCSEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhc---CcCeee
Confidence            367788999999999999999999999999999999998887766552   46678999999999887764   689999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-CCCCchhhHHHHHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-LEGHTIYSASKAALDSI  165 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-~~~~~~y~~sK~al~~l  165 (238)
                      ||||+..    ...+.++ |+..+++|+.+.++....+.+.+....  .....+++.....+ ..+...|+++|+++..|
T Consensus        98 n~Ag~g~----~~~~~e~-~~~~~~~nv~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~g~~~y~~sk~a~~~l  170 (191)
T d1luaa1          98 TAGAIGL----ELLPQAA-WQNESSIEIVADYNAQPPLGIGGIDAT--DKGKEYGGKRAFGALGIGGLKLKLHRACIAKL  170 (191)
T ss_dssp             ECCCTTC----CCBCHHH-HHTCTTCCEEEECCCSSSCSBTTCCTT--CEEEEETTEEEECHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCcccc----ccCCHHH-HHhhhcceeehhHhhHHHHHHHhhhhc--cCcEEecceEEEeccCcCcHHHHHHHHHHHHH
Confidence            9999642    3456676 888888888776665444332222211  12222222221111 12235799999999887


Q ss_pred             HHH
Q psy14567        166 TRT  168 (238)
Q Consensus       166 ~~~  168 (238)
                      +++
T Consensus       171 ~~s  173 (191)
T d1luaa1         171 FES  173 (191)
T ss_dssp             TSC
T ss_pred             Hhc
Confidence            643

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.70  E-value=4.3e-16  Score=127.82  Aligned_cols=168  Identities=13%  Similarity=0.056  Sum_probs=124.0

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh----HhHHHHHh-hCCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ----ANLDSLKQ-AFPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      ++|+||||+|.||++++++|+++|++|+++++..    ........ ...++.++.+|++|.++++.+++.. ++|+|||
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-~~d~Vih   80 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-KIDSVIH   80 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-CCCEEEE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-CCCEEEE
Confidence            4789999999999999999999999999886421    12222211 2346899999999999999999877 5999999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc---------------cCCCC
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT---------------ALEGH  152 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------~~~~~  152 (238)
                      +|+......    ..++ -.....+|+.++..+++++....     -.+++++||.....               +..+.
T Consensus        81 lAa~~~~~~----~~~~-~~~~~~~N~~~t~~ll~~~~~~~-----i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~  150 (347)
T d1z45a2          81 FAGLKAVGE----STQI-PLRYYHNNILGTVVLLELMQQYN-----VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPT  150 (347)
T ss_dssp             CCSCCCHHH----HHHS-HHHHHHHHHHHHHHHHHHHHHHT-----CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCC
T ss_pred             ccccccccc----cccC-cccccccchhhhHHHHHHHHhcc-----cceEEeecceeeecCcccCCCCCccccccCCCCC
Confidence            999763211    1122 34567899999999999986432     34899999855421               12245


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      ..|+.+|.+.+.+++.+..... .++.+..+.|+.+-.+.
T Consensus       151 ~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~lR~~~v~g~~  189 (347)
T d1z45a2         151 NPYGHTKYAIENILNDLYNSDK-KSWKFAILRYFNPIGAH  189 (347)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHST-TSCEEEEEEECEEECCC
T ss_pred             ChhHhHHHHHHHHHHHHHHhhc-cCCcEEEEeecceEeec
Confidence            6899999999999988875443 36788888887776554

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=5.4e-16  Score=126.79  Aligned_cols=166  Identities=13%  Similarity=0.057  Sum_probs=125.9

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCC----hHhHHHHH-hhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKT----QANLDSLK-QAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      ++||||+|.||++++++|+++|++|++++|-    ........ ....++.++++|++|.+.+.++++.. ++|+|||+|
T Consensus         3 iLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-~~d~ViHlA   81 (338)
T d1udca_           3 VLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-AIDTVIHFA   81 (338)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-TCSEEEECC
T ss_pred             EEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-CCCEEEECC
Confidence            7899999999999999999999999998752    22222222 23357999999999999999999876 489999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc------------CCCCchhhH
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA------------LEGHTIYSA  157 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~~~~~y~~  157 (238)
                      +.....    .+.++ ....+++|+.++..+++++...-     -.++|++||......            ..+...|+.
T Consensus        82 a~~~~~----~~~~~-~~~~~~~Nv~gt~nlL~~~~~~~-----v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~  151 (338)
T d1udca_          82 GLKAVG----ESVQK-PLEYYDNNVNGTLRLISAMRAAN-----VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGK  151 (338)
T ss_dssp             SCCCHH----HHHHC-HHHHHHHHHHHHHHHHHHHHHHT-----CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHH
T ss_pred             Cccchh----hHHhC-HHHHHHhHHHHHHHHHHHHHHhC-----CCEEEecCcceEEccccccccccccccCCCcchHHH
Confidence            964321    11222 45678999999999999886542     347888888664321            124678999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~  193 (238)
                      +|.+.+.+++....+..  ++.+..+.|+.+-.+..
T Consensus       152 sK~~~e~~~~~~~~~~~--~~~~~ilR~~~v~G~~~  185 (338)
T d1udca_         152 SKLMVEQILTDLQKAQP--DWSIALLRYFNPVGAHP  185 (338)
T ss_dssp             HHHHHHHHHHHHHHHST--TCEEEEEEECEEECCCT
T ss_pred             HHhhhhHHHHHHHhhcc--CCeEEEEeeccEEeccC
Confidence            99999999988776653  57888899999887654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.67  E-value=9.6e-16  Score=127.71  Aligned_cols=169  Identities=11%  Similarity=0.051  Sum_probs=124.7

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCC--------------------hHhHHHHHh-hCCCceEEEeecCCHHHH
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT--------------------QANLDSLKQ-AFPNVQTVQVDLQDWART   72 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~--------------------~~~~~~~~~-~~~~~~~~~~D~~~~~~v   72 (238)
                      .++||||||.||.+++++|++.|++|++++.-                    .+.+..... ...+++++++|++|.+.+
T Consensus         3 kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l   82 (393)
T d1i24a_           3 RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEFL   82 (393)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHHH
Confidence            46889999999999999999999999988511                    111222222 235689999999999999


Q ss_pred             HHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----
Q psy14567         73 RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----  147 (238)
Q Consensus        73 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----  147 (238)
                      +++++.+ ++|+|||.|+..... ....+.+. ....+++|+.++..+++++...-.    ..++++.||.....     
T Consensus        83 ~~~~~~~-~~d~ViHlAa~~~~~-~s~~~~~~-~~~~~~~Nv~gt~nll~~~~~~~~----~~~~i~~ss~~~~~~~~~~  155 (393)
T d1i24a_          83 AESFKSF-EPDSVVHFGEQRSAP-YSMIDRSR-AVYTQHNNVIGTLNVLFAIKEFGE----ECHLVKLGTMGEYGTPNID  155 (393)
T ss_dssp             HHHHHHH-CCSEEEECCSCCCHH-HHTSCHHH-HHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEECCGGGGCCCSSC
T ss_pred             HHHHHhh-cchheeccccccccc-cccccccc-cccccccccccccHHHHHHHHhcc----ccceeeccccccccccccc
Confidence            9999877 599999999875421 12233444 566789999999999998864432    34566676654321     


Q ss_pred             -------------------cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        148 -------------------ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       148 -------------------~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                                         +..+...|+.+|.+.+.+++.+..+.   ++++..+.|+.+..+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         156 IEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVK  216 (393)
T ss_dssp             BCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSC
T ss_pred             cccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCC
Confidence                               12234579999999999999888775   6889999999888764

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.8e-16  Score=120.70  Aligned_cols=189  Identities=14%  Similarity=-0.016  Sum_probs=125.1

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.++.++||||||+||++++++|+++|++|.++.|+.++++...  -.+++++.+|++|.+++.++++   ..|++|+++
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~--~~~~~~~~gD~~d~~~l~~al~---~~d~vi~~~   75 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG--PRPAHVVVGDVLQAADVDKTVA---GQDAVIVLL   75 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS--CCCSEEEESCTTSHHHHHHHHT---TCSEEEECC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc--ccccccccccccchhhHHHHhc---CCCEEEEEe
Confidence            35677889999999999999999999999999999988754332  2468999999999999888877   479999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCC----CchhhHHHHHHHHH
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEG----HTIYSASKAALDSI  165 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----~~~y~~sK~al~~l  165 (238)
                      |........            +++..++..+++++    ++.+ -.++|++||.......+.    ...|...|...+.+
T Consensus        76 g~~~~~~~~------------~~~~~~~~~l~~aa----~~~~-v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~  138 (205)
T d1hdoa_          76 GTRNDLSPT------------TVMSEGARNIVAAM----KAHG-VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKV  138 (205)
T ss_dssp             CCTTCCSCC------------CHHHHHHHHHHHHH----HHHT-CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHH
T ss_pred             ccCCchhhh------------hhhHHHHHHHHHHH----HhcC-CCeEEEEeeeeccCCCccccccccccchHHHHHHHH
Confidence            865322111            12233444444443    4444 468999998765433222    23455555555544


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCccccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSVG  233 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~~  233 (238)
                      .+       ..+++...|.||.+...-...     .. ...........+.+.+|+|++++..+.++.
T Consensus       139 l~-------~~~~~~tiirp~~~~~~~~~~-----~~-~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~  193 (205)
T d1hdoa_         139 LR-------ESGLKYVAVMPPHIGDQPLTG-----AY-TVTLDGRGPSRVISKHDLGHFMLRCLTTDE  193 (205)
T ss_dssp             HH-------HTCSEEEEECCSEEECCCCCS-----CC-EEESSSCSSCSEEEHHHHHHHHHHTTSCST
T ss_pred             HH-------hcCCceEEEecceecCCCCcc-----cE-EEeeCCCCCCCcCCHHHHHHHHHHHhCCCC
Confidence            32       347999999999985432111     00 001111222345688999999888886643

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.67  E-value=6.7e-16  Score=125.93  Aligned_cols=172  Identities=16%  Similarity=0.015  Sum_probs=126.9

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH-----hHHHHHh-----hCCCceEEEeecCCHHHHHHHHHhcCCc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA-----NLDSLKQ-----AFPNVQTVQVDLQDWARTRAAVSKVGPV   82 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~-----~~~~~~~~~~D~~~~~~v~~~~~~~g~i   82 (238)
                      ++++||||||.||++++++|+++|++|+.++|..+     +++.+..     ....+.++.+|+++.+++.+.++.. ++
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~-~~   80 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI-KP   80 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH-CC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh-cc
Confidence            57899999999999999999999999999998542     1111111     1135788999999999999988765 68


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc----------ccCCCC
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK----------TALEGH  152 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------~~~~~~  152 (238)
                      |++||+|+......    ..++ ....++.|+.+...++.++.....+.....++++.||....          .+..+.
T Consensus        81 D~Vih~Aa~~~~~~----~~~~-p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~  155 (339)
T d1n7ha_          81 DEVYNLAAQSHVAV----SFEI-PDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPR  155 (339)
T ss_dssp             SEEEECCSCCCHHH----HHHS-HHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCC
T ss_pred             chhhhccccccccc----cccC-ccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCc
Confidence            99999998754321    1122 35567899999999999887766554423345555554321          123356


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~  193 (238)
                      ..|+.+|.+.+.++..+...+   ++.+..+.|+.+-.|..
T Consensus       156 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~  193 (339)
T d1n7ha_         156 SPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRR  193 (339)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred             chhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCC
Confidence            799999999999999988775   68999999999888753

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.67  E-value=7.1e-16  Score=126.30  Aligned_cols=166  Identities=16%  Similarity=0.161  Sum_probs=124.3

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHhcCCccE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSKVGPVDV   84 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~g~id~   84 (238)
                      +.++|+||||+|.||.+++++|+++|++|+++.|+.++.+.+....      .....+..|+++.+++.+++.   ..|+
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~---~~~~   86 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK---GAAG   86 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT---TCSE
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc---cchh
Confidence            4678999999999999999999999999999999987766554321      124456789999887766655   5799


Q ss_pred             EEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC---------------
Q psy14567         85 LINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL---------------  149 (238)
Q Consensus        85 li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------------  149 (238)
                      ++|+++....    ..+    ....+..|+.++..+++.+...   ++ -.++|++||..+....               
T Consensus        87 v~~~a~~~~~----~~~----~~~~~~~nv~gt~~ll~~~~~~---~~-v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~  154 (342)
T d1y1pa1          87 VAHIASVVSF----SNK----YDEVVTPAIGGTLNALRAAAAT---PS-VKRFVLTSSTVSALIPKPNVEGIYLDEKSWN  154 (342)
T ss_dssp             EEECCCCCSC----CSC----HHHHHHHHHHHHHHHHHHHHTC---TT-CCEEEEECCGGGTCCCCTTCCCCEECTTCCC
T ss_pred             hhhhcccccc----ccc----ccccccchhhhHHHHHHhhhcc---cc-cccccccccceeeccCCCCCCCccccccccc
Confidence            9999986532    122    2444678999999888887532   12 4689999997542211               


Q ss_pred             ----------------CCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        150 ----------------EGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       150 ----------------~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                                      .+...|+.+|.+.+.+++.+...... ++++..+.|+.+-.|.
T Consensus       155 ~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~~~~~~i~p~~v~Gp~  212 (342)
T d1y1pa1         155 LESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTI  212 (342)
T ss_dssp             HHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCC
T ss_pred             cccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhccc-ccccceecccceeCCC
Confidence                            11246999999999999998887754 6888899999987764

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.4e-16  Score=129.11  Aligned_cols=168  Identities=13%  Similarity=-0.007  Sum_probs=122.8

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-----HHHH----Hh-hCCCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-----LDSL----KQ-AFPNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~----~~-~~~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      |++||||+|.||++++++|.+.|++|+.++|..+.     ++.+    .. ...++.++.+|++|++.+.++++.. .++
T Consensus         3 I~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~   81 (347)
T d1t2aa_           3 VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV-KPT   81 (347)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH-CCS
T ss_pred             EEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc-ccc
Confidence            44899999999999999999999999999986432     1211    11 1136889999999999999998876 478


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-----------ccCCCC
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-----------TALEGH  152 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~  152 (238)
                      +++|.++......    ..++ ....+++|+.++..+++++......+  ..++|++||.+-.           .+..+.
T Consensus        82 ~v~~~~a~~~~~~----~~~~-~~~~~~~Nv~gt~~ll~~~~~~~~~~--~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~  154 (347)
T d1t2aa_          82 EIYNLGAQSHVKI----SFDL-AEYTADVDGVGTLRLLDAVKTCGLIN--SVKFYQASTSELYGKVQEIPQKETTPFYPR  154 (347)
T ss_dssp             EEEECCSCCCHHH----HHHS-HHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGGGTCSCSSSSBCTTSCCCCC
T ss_pred             eeeeeeeccccch----hhcc-chhhhhhHHHHHHHHHHHHHHcCCCC--CcEEEEecchheecCCCCCCCCCCCCCCCC
Confidence            8888887553211    1122 34557899999999998886554322  3489999886531           122345


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      ..|+.||.+.+.+++.++..+   ++.+..+.|+.+..|.
T Consensus       155 ~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~  191 (347)
T d1t2aa_         155 SPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPR  191 (347)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCC
Confidence            689999999999999987775   5778888888887764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.66  E-value=1.5e-16  Score=131.36  Aligned_cols=207  Identities=13%  Similarity=0.015  Sum_probs=140.4

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEE-ecCCh-----HhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIA-LSKTQ-----ANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~-~~r~~-----~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      ++||||+|.||++++++|++.|++|++ +++..     ..++.+ ...+++.++.+|++|.+++.++++.. ++|+|||+
T Consensus         3 ILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~-~~d~Vihl   80 (361)
T d1kewa_           3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQY-QPDAVMHL   80 (361)
T ss_dssp             EEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred             EEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhC-CCCEEEEC
Confidence            589999999999999999999997554 44321     112222 12246899999999999999998876 69999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----CCceEEEEccccccc-----------------
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHK----IQGSIVNVSSIAGKT-----------------  147 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~g~iv~isS~~~~~-----------------  147 (238)
                      |+.....    .+.++ ....+++|+.++..+++.+........    ...+++++||....-                 
T Consensus        81 Aa~~~~~----~~~~~-p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~  155 (361)
T d1kewa_          81 AAESHVD----RSITG-PAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLF  155 (361)
T ss_dssp             CSCCCHH----HHHHC-THHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCB
T ss_pred             ccccchh----hHHhC-HHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCc
Confidence            9865321    11122 355689999999999999987754321    135899999966321                 


Q ss_pred             ----cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCC---------cccCCCCCC
Q psy14567        148 ----ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGP---------MLAKTPLGR  214 (238)
Q Consensus       148 ----~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~~r  214 (238)
                          +..+...|+.+|.+.+.+++.++..+   ++.+..+.|+.+-.|........+.+...         .......+-
T Consensus       156 ~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~  232 (361)
T d1kewa_         156 TETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRD  232 (361)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEE
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEe
Confidence                12234679999999999999998776   68888999999888754221000111110         111122233


Q ss_pred             cCCCCCccccccccccc
Q psy14567        215 FAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       215 ~~~~~~ia~~~~~l~s~  231 (238)
                      +...+|+|+++..++..
T Consensus       233 ~i~v~D~a~ai~~~~~~  249 (361)
T d1kewa_         233 WLYVEDHARALHMVVTE  249 (361)
T ss_dssp             EEEHHHHHHHHHHHHHH
T ss_pred             CEEHHHHHHHHHHHHhc
Confidence            56777888877666543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.61  E-value=4.3e-15  Score=121.42  Aligned_cols=172  Identities=17%  Similarity=0.141  Sum_probs=128.4

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecC----ChHhHHHHHhhC-----CCceEEEeecCCHHHHHHHH
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSK----TQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAV   76 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r----~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~   76 (238)
                      |..+.+.+++|||||||.||++++++|.+.|++|+.++|    +..+.+.+....     .++.++.+|..|........
T Consensus        10 ~~~~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~   89 (341)
T d1sb8a_          10 KELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC   89 (341)
T ss_dssp             HHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH
T ss_pred             HhCCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc
Confidence            445567788999999999999999999999999999876    233333333322     46889999999988765554


Q ss_pred             HhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc----------
Q psy14567         77 SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK----------  146 (238)
Q Consensus        77 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------  146 (238)
                      .   ..+.++|.+......    ...++ ....+++|+.++..+++++...    + ..++|++||....          
T Consensus        90 ~---~~~~v~~~~a~~~~~----~~~~~-~~~~~~~Nv~gt~~ll~~~~~~----~-~~~~i~~SS~~vyg~~~~~~~~E  156 (341)
T d1sb8a_          90 A---GVDYVLHQAALGSVP----RSIND-PITSNATNIDGFLNMLIAARDA----K-VQSFTYAASSSTYGDHPGLPKVE  156 (341)
T ss_dssp             T---TCSEEEECCSCCCHH----HHHHC-HHHHHHHHTHHHHHHHHHHHHT----T-CSEEEEEEEGGGGTTCCCSSBCT
T ss_pred             c---ccccccccccccccc----ccccC-ccchhheeehhHHHHHHHHHhc----C-CceEEEcccceeeCCCCCCCccC
Confidence            4   578888888754321    12233 5667899999999999988542    2 3589999987642          


Q ss_pred             -ccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc
Q psy14567        147 -TALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       147 -~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~  193 (238)
                       .+..+...|+.+|.+.+.+++.+....   ++++..+.|+.+-++..
T Consensus       157 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~  201 (341)
T d1sb8a_         157 DTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQ  201 (341)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTC
T ss_pred             CCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCc
Confidence             123356899999999999999988776   57788888988877653

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.60  E-value=7e-15  Score=118.94  Aligned_cols=206  Identities=11%  Similarity=-0.049  Sum_probs=138.9

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh--HHHHHhhC--CCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN--LDSLKQAF--PNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      +.++||||||.||++++++|+++|++|+.++|..+.  .+.+....  +++.++.+|++|.+++.+.+... ..++++++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-~~~~~~~~   79 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-QPQEVYNL   79 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-cccccccc
Confidence            457899999999999999999999999999986532  22332222  46889999999999999888765 46788888


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-----------ccCCCCchhhH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-----------TALEGHTIYSA  157 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~~~y~~  157 (238)
                      ++........    ++ ....++.|+.++..+++++...-.    ..++++.||..-.           .+..+...|+.
T Consensus        80 a~~~~~~~~~----~~-~~~~~~~n~~g~~~~l~~~~~~~~----~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~  150 (321)
T d1rpna_          80 AAQSFVGASW----NQ-PVTTGVVDGLGVTHLLEAIRQFSP----ETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGV  150 (321)
T ss_dssp             CSCCCHHHHT----TS-HHHHHHHHTHHHHHHHHHHHHHCT----TSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHH
T ss_pred             cccccccccc----cc-hHHHHhhhhhchHHHHHHHHHhCC----CcccccccchhhcCcccCCCCCCCCCccccChhHH
Confidence            7655322111    11 455678999999999888854322    3466666664321           12235689999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-------------CCccCCcccCCCCCCcCCCCCcccc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-------------PAKAGPMLAKTPLGRFAGKLKPKPW  224 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-------------~~~~~~~~~~~~~~r~~~~~~ia~~  224 (238)
                      +|.+.+.+++.+..+.   ++++..+.|+.+..|........             ....-........+-+...+|++++
T Consensus       151 sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~  227 (321)
T d1rpna_         151 AKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEA  227 (321)
T ss_dssp             HHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHH
Confidence            9999999999988776   57778888887777653211100             0000001122233346677888888


Q ss_pred             ccccccc
Q psy14567        225 NRWLLPS  231 (238)
Q Consensus       225 ~~~l~s~  231 (238)
                      +..++..
T Consensus       228 ~~~~~~~  234 (321)
T d1rpna_         228 MWLMLQQ  234 (321)
T ss_dssp             HHHHHHS
T ss_pred             HHHHHhc
Confidence            8777644

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.59  E-value=6.4e-15  Score=121.34  Aligned_cols=166  Identities=15%  Similarity=0.078  Sum_probs=124.4

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      ++|+ ++||||+|.||++++++|.++|++|+++++....-  .........+..+|+.+.+.+.++++   ++|.+||+|
T Consensus        14 ~nMK-ILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~--~~~~~~~~~~~~~D~~~~~~~~~~~~---~~d~Vih~a   87 (363)
T d2c5aa1          14 ENLK-ISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH--MTEDMFCDEFHLVDLRVMENCLKVTE---GVDHVFNLA   87 (363)
T ss_dssp             SCCE-EEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS--SCGGGTCSEEEECCTTSHHHHHHHHT---TCSEEEECC
T ss_pred             CCCE-EEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccc--hhhhcccCcEEEeechhHHHHHHHhh---cCCeEeecc
Confidence            3566 68999999999999999999999999987654321  11222356788899999988777765   589999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc------------------cCCC
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT------------------ALEG  151 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------~~~~  151 (238)
                      +.........   +. ....+.+|+.++..++.++...    + -.++|++||.....                  +..+
T Consensus        88 ~~~~~~~~~~---~~-~~~~~~~n~~gt~~ll~~~~~~----~-vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p  158 (363)
T d2c5aa1          88 ADMGGMGFIQ---SN-HSVIMYNNTMISFNMIEAARIN----G-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEP  158 (363)
T ss_dssp             CCCCCHHHHT---TC-HHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCC
T ss_pred             cccccccccc---cc-cccccccccchhhHHHHhHHhh----C-ccccccccccccccccccccccccccccccCCcCCC
Confidence            8764322111   11 4566789999999988887543    2 35899999966532                  1223


Q ss_pred             CchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc
Q psy14567        152 HTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       152 ~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~  193 (238)
                      ...|+.+|.+.+.+++.+..++   |+.+..+.|+.+..+..
T Consensus       159 ~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~  197 (363)
T d2c5aa1         159 QDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFG  197 (363)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCC
Confidence            5689999999999999888776   68899999999987653

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.57  E-value=4.7e-14  Score=114.40  Aligned_cols=149  Identities=18%  Similarity=0.135  Sum_probs=109.0

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCC--hH---hHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKT--QA---NLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~--~~---~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      ++||||+|.||++++++|+++|++|+.+++-  ..   +++.+ ...++++++.+|+++.+++.++++.. ++|++||+|
T Consensus         3 ILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~-~~~~~~~~i~~Di~~~~~l~~~~~~~-~~d~Vih~a   80 (338)
T d1orra_           3 LLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWL-SSLGNFEFVHGDIRNKNDVTRLITKY-MPDSCFHLA   80 (338)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHH-CCSEEEECC
T ss_pred             EEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHh-hccCCcEEEEcccCCHHHHHHHHHhc-CCceEEeec
Confidence            5899999999999999999999999988631  22   22223 34468999999999999999998876 589999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc---------------------
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA---------------------  148 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~---------------------  148 (238)
                      +.....    ...++ ....+++|+.++..+++++...    + ..+.++.||..+..+                     
T Consensus        81 a~~~~~----~~~~~-~~~~~~~Nv~gt~nll~~~~~~----~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (338)
T d1orra_          81 GQVAMT----TSIDN-PCMDFEINVGGTLNLLEAVRQY----N-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPN  150 (338)
T ss_dssp             CCCCHH----HHHHC-HHHHHHHHHHHHHHHHHHHHHH----C-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTT
T ss_pred             cccccc----ccccC-hHHHHHHHHHHHHHHHHhhhcc----c-cccccccccccccccccccccccccccccccccccc
Confidence            876431    11122 4667889999999999987543    2 234444444432111                     


Q ss_pred             -------CCCCchhhHHHHHHHHHHHHHHHHhCC
Q psy14567        149 -------LEGHTIYSASKAALDSITRTMALELGP  175 (238)
Q Consensus       149 -------~~~~~~y~~sK~al~~l~~~l~~~~~~  175 (238)
                             ..+...|+.+|...+.+.......+..
T Consensus       151 ~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~  184 (338)
T d1orra_         151 GYDESTQLDFHSPYGCSKGAADQYMLDYARIFGL  184 (338)
T ss_dssp             CBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             CcccCCccccccccccccchhhhhhhhhhhccCc
Confidence                   124568999999999999988887743

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.56  E-value=3.1e-14  Score=114.83  Aligned_cols=151  Identities=15%  Similarity=0.069  Sum_probs=115.6

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      .++||||+|.||++++++|+++|+.|+++++..                .+|+.+.+.+.++++.. ++|.++|+|+...
T Consensus         4 kIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------~~~~~~~~~~~~~~~~~-~~d~v~~~a~~~~   66 (315)
T d1e6ua_           4 RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------ELNLLDSRAVHDFFASE-RIDQVYLAAAKVG   66 (315)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------TCCTTCHHHHHHHHHHH-CCSEEEECCCCCC
T ss_pred             EEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------hccccCHHHHHHHHhhc-CCCEEEEcchhcc
Confidence            368999999999999999999999888775433                26899999999888654 5899999997653


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC----------------CCCchhhH
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL----------------EGHTIYSA  157 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------~~~~~y~~  157 (238)
                      ...   ....+ ....+++|+.++..+++++...    + -.++|++||.+...+.                +....|+.
T Consensus        67 ~~~---~~~~~-~~~~~~~Nv~gt~~ll~~a~~~----~-v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~  137 (315)
T d1e6ua_          67 GIV---ANNTY-PADFIYQNMMIESNIIHAAHQN----D-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAI  137 (315)
T ss_dssp             CHH---HHHHC-HHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHH
T ss_pred             ccc---cchhh-HHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHH
Confidence            211   11222 4556789999999999888543    2 3489999997753211                11246999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~  193 (238)
                      +|.+.+.+++.+..+.   |+++..+.|+.+-.|..
T Consensus       138 sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~  170 (315)
T d1e6ua_         138 AKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD  170 (315)
T ss_dssp             HHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred             HHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence            9999999999998776   68999999999988754

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.55  E-value=7.6e-14  Score=115.67  Aligned_cols=167  Identities=16%  Similarity=0.113  Sum_probs=122.0

Q ss_pred             CCCCCCCCchHHHHHHHHhh-CCCEEEEecC------------ChHhHHH-HHhh--------CCCceEEEeecCCHHHH
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQ-HEAIIIALSK------------TQANLDS-LKQA--------FPNVQTVQVDLQDWART   72 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~-~G~~V~~~~r------------~~~~~~~-~~~~--------~~~~~~~~~D~~~~~~v   72 (238)
                      ++||||+|.||++++++|++ .|++|+++++            +.+.... +...        .....++.+|++|++.+
T Consensus         5 VLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l   84 (383)
T d1gy8a_           5 VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFL   84 (383)
T ss_dssp             EEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHH
T ss_pred             EEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHHHh
Confidence            58999999999999999985 6899998763            1111111 1111        12477899999999999


Q ss_pred             HHHHHhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----
Q psy14567         73 RAAVSKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----  147 (238)
Q Consensus        73 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----  147 (238)
                      ++++++..++|+|+|+|+......    ..+. ....+++|+.++..++.++...    + ..+++++++.....     
T Consensus        85 ~~~~~~~~~~d~ViH~Aa~~~~~~----~~~~-~~~~~~~N~~~t~~~l~~~~~~----~-~~~~~~~~s~~~~~~~~~~  154 (383)
T d1gy8a_          85 NGVFTRHGPIDAVVHMCAFLAVGE----SVRD-PLKYYDNNVVGILRLLQAMLLH----K-CDKIIFSSSAAIFGNPTMG  154 (383)
T ss_dssp             HHHHHHSCCCCEEEECCCCCCHHH----HHHC-HHHHHHHHHHHHHHHHHHHHHT----T-CCEEEEEEEGGGTBSCCC-
T ss_pred             hhhhhccceeehhhcccccccccc----cccc-cccccccccccccccchhhhcc----C-Ccccccccccccccccccc
Confidence            999999988999999998764321    1122 4456789999999998887642    2 34666665544321     


Q ss_pred             -------------cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCccc
Q psy14567        148 -------------ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGR  194 (238)
Q Consensus       148 -------------~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~  194 (238)
                                   ...+...|+.+|.+.+.+++.+...+   |+.+..+.|+.+..+...
T Consensus       155 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~~~  211 (383)
T d1gy8a_         155 SVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHED  211 (383)
T ss_dssp             ----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCTT
T ss_pred             cccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccCcc
Confidence                         12346789999999999999987765   689999999998876543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.55  E-value=4.6e-14  Score=115.58  Aligned_cols=171  Identities=15%  Similarity=0.100  Sum_probs=125.2

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHH---hhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLK---QAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      .+.++||||||.||+++++.|.+.|++|++++|+.++...+.   ...++++++.+|++|++.+.++++.. .+|+++|.
T Consensus         8 ~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-~~~~v~~~   86 (356)
T d1rkxa_           8 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-QPEIVFHM   86 (356)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-CCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc-hhhhhhhh
Confidence            356777999999999999999999999999999876533322   22346999999999999999988766 58999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc------------cCCCCchhh
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT------------ALEGHTIYS  156 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------~~~~~~~y~  156 (238)
                      |+.....    ...+. ....+++|+.++..+++++...-   . ...+++.|+.....            +..+...|+
T Consensus        87 aa~~~~~----~~~~~-~~~~~~~Nv~g~~n~l~~~~~~~---~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~  157 (356)
T d1rkxa_          87 AAQPLVR----LSYSE-PVETYSTNVMGTVYLLEAIRHVG---G-VKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYS  157 (356)
T ss_dssp             CSCCCHH----HHHHC-HHHHHHHHTHHHHHHHHHHHHHC---C-CCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHH
T ss_pred             hcccccc----ccccC-Cccccccccccchhhhhhhhccc---c-ccccccccccccccccccccccccccccCCCCccc
Confidence            9865321    11222 46678899999999998886432   1 33455555433321            122456799


Q ss_pred             HHHHHHHHHHHHHHHHhCC------CCeEEEEEeCCceecCc
Q psy14567        157 ASKAALDSITRTMALELGP------YNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       157 ~sK~al~~l~~~l~~~~~~------~~i~v~~i~PG~v~t~~  192 (238)
                      .+|...+.+++..+.++..      .++.+..+.|+.+..|.
T Consensus       158 ~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~  199 (356)
T d1rkxa_         158 NSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG  199 (356)
T ss_dssp             HHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred             cccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence            9999999999888876642      36788888998887654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.54  E-value=1.8e-14  Score=117.56  Aligned_cols=200  Identities=15%  Similarity=0.040  Sum_probs=136.5

Q ss_pred             CCCCCCCCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      ++||||||.||++++++|+++| ++|+.+++......++. ..++++++++|+++.+++.+.+.+  ++|+|||+|+...
T Consensus         3 ILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-~~~~~~~i~~Di~~~~~~~~~~~~--~~d~Vih~a~~~~   79 (342)
T d2blla1           3 VLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-NHPHFHFVEGDISIHSEWIEYHVK--KCDVVLPLVAIAT   79 (342)
T ss_dssp             EEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-TCTTEEEEECCTTTCSHHHHHHHH--HCSEEEECBCCCC
T ss_pred             EEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-cCCCeEEEECccCChHHHHHHHHh--CCCcccccccccc
Confidence            6899999999999999999999 48999888766544443 246799999999987776654332  4899999999764


Q ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccC------------------CCCchh
Q psy14567         94 FDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTAL------------------EGHTIY  155 (238)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------------~~~~~y  155 (238)
                      ...    ..++ ....+++|+.++..+++++..    .  +-+.++.||.......                  .+...|
T Consensus        80 ~~~----~~~~-~~~~~~~nv~gt~~ll~~~~~----~--~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y  148 (342)
T d2blla1          80 PIE----YTRN-PLRVFELDFEENLRIIRYCVK----Y--RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIY  148 (342)
T ss_dssp             HHH----HHHS-HHHHHHHHTHHHHHHHHHHHH----T--TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHH
T ss_pred             ccc----cccC-Ccccccccccccccccccccc----c--cccccccccccccccccccccccccccccccccCCCcchh
Confidence            321    1122 356688999999999999743    2  2366677765532211                  123579


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCC--------ccCC---------cccCCCCCCcCCC
Q psy14567        156 SASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPA--------KAGP---------MLAKTPLGRFAGK  218 (238)
Q Consensus       156 ~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~--------~~~~---------~~~~~~~~r~~~~  218 (238)
                      +.+|.+.+.+++.++..+   |+.+..+.|..+-.+..........        +...         .......+-+...
T Consensus       149 ~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v  225 (342)
T d2blla1         149 SVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI  225 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEH
T ss_pred             hhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeeccc
Confidence            999999999999998876   6888888888888775433221110        0000         1111222335677


Q ss_pred             CCccccccccccc
Q psy14567        219 LKPKPWNRWLLPS  231 (238)
Q Consensus       219 ~~ia~~~~~l~s~  231 (238)
                      +|+++++..++..
T Consensus       226 ~D~~~a~~~~~~~  238 (342)
T d2blla1         226 RDGIEALYRIIEN  238 (342)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             ccccceeeeehhh
Confidence            8888887777654

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.54  E-value=1.9e-14  Score=111.13  Aligned_cols=205  Identities=11%  Similarity=-0.022  Sum_probs=126.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      .+++++||||||.||+++++.|+++|+  .|+.+.|++++.+.+.   .+++++.+|+++.++..++++   .+|.+||+
T Consensus         2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~---~~d~vi~~   75 (252)
T d2q46a1           2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG---GEADVFIGDITDADSINPAFQ---GIDALVIL   75 (252)
T ss_dssp             SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT---CCTTEEECCTTSHHHHHHHHT---TCSEEEEC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc---CCcEEEEeeeccccccccccc---cceeeEEE
Confidence            468899999999999999999999996  5677789887765443   468899999999999888877   57999999


Q ss_pred             cCCCCCCCC---------CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHH
Q psy14567         89 AAVARFDRF---------LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASK  159 (238)
Q Consensus        89 ag~~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK  159 (238)
                      ++.......         ....... ......+|+.+...+........     .+...+.++.....+..+...+..++
T Consensus        76 a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~s~~~~~~~~~~~~~~~~~~  149 (252)
T d2q46a1          76 TSAVPKMKPGFDPTKGGRPEFIFED-GQYPEQVDWIGQKNQIDAAKVAG-----VKHIVVVGSMGGTNPDHPLNKLGNGN  149 (252)
T ss_dssp             CCCCCEECTTCCTTSCCCCCEECCT-TCSHHHHTTHHHHHHHHHHHHHT-----CSEEEEEEETTTTCTTCGGGGGGGCC
T ss_pred             Eeeccccccccchhhhhhccccccc-chhhhccccccceeecccccccc-----ccccccccccccCCCCcccccccccc
Confidence            986532110         0111111 34445678888877766654432     45777777766544433322222222


Q ss_pred             HH-HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        160 AA-LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       160 ~a-l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      .. .......+..   ..|+++..+.||.+..+.............. .. .....+...+|+|++++.++.+.
T Consensus       150 ~~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~-~~-~~~~~~i~~~Dva~a~~~~l~~~  218 (252)
T d2q46a1         150 ILVWKRKAEQYLA---DSGTPYTIIRAGGLLDKEGGVRELLVGKDDE-LL-QTDTKTVPRADVAEVCIQALLFE  218 (252)
T ss_dssp             HHHHHHHHHHHHH---HSSSCEEEEEECEEECSCTTSSCEEEESTTG-GG-GSSCCEEEHHHHHHHHHHHTTCG
T ss_pred             hhhhhhhhhhhhh---cccccceeecceEEECCCcchhhhhhccCcc-cc-cCCCCeEEHHHHHHHHHHHhCCc
Confidence            22 2222222222   2478899999999987753211000000000 00 11123557789999988877653

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4.1e-14  Score=114.27  Aligned_cols=159  Identities=10%  Similarity=0.044  Sum_probs=111.2

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh-HhHHHHHhhC--CCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ-ANLDSLKQAF--PNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +.++||||+|-||++++++|+++|++|++++|.. ...+.+....  .++.....|..+     .++   .++|+|||+|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~-----~~~---~~~d~VihlA   73 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE-----PLY---IEVDQIYHLA   73 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTS-----CCC---CCCSEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHH-----HHH---cCCCEEEECc
Confidence            3468899999999999999999999999987632 2222222212  224444444422     222   3699999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc----------------cCCCCc
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT----------------ALEGHT  153 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----------------~~~~~~  153 (238)
                      +....... .   ++ ....+++|+.++..+++++..    .+  .++|++||.+...                +..+..
T Consensus        74 a~~~~~~~-~---~~-~~~~~~~Nv~g~~~ll~~~~~----~~--~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~  142 (312)
T d2b69a1          74 SPASPPNY-M---YN-PIKTLKTNTIGTLNMLGLAKR----VG--ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRA  142 (312)
T ss_dssp             SCCSHHHH-T---TC-HHHHHHHHHHHHHHHHHHHHH----HT--CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTH
T ss_pred             ccCCchhH-H---hC-HHHHHHHHHHHHHHHHHHHHH----cC--CcEEEEEChheecCCCCCCCCccccCCCCCCCCcc
Confidence            86542211 1   12 355678999999999988743    22  4899998864321                123457


Q ss_pred             hhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcc
Q psy14567        154 IYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMG  193 (238)
Q Consensus       154 ~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~  193 (238)
                      .|+.+|.+.+.+++.++..+   |+.+..+.|+.+-.|..
T Consensus       143 ~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~  179 (312)
T d2b69a1         143 CYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRM  179 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCC
Confidence            89999999999999998876   68899999999998754

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.51  E-value=4.7e-14  Score=115.41  Aligned_cols=203  Identities=14%  Similarity=0.033  Sum_probs=131.7

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEE--EEecCCh--HhHHHHHh-hCCCceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAII--IALSKTQ--ANLDSLKQ-AFPNVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V--~~~~r~~--~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      ++-|+||||||-||++++++|.++|+.|  +..++..  .....+.. ...++.++.+|++|.+.+..+++.   .|.++
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~---~~~v~   78 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAK---ADAIV   78 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTT---CSEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhh---hhhhh
Confidence            5668999999999999999999999754  4433211  11111111 124689999999999999888774   67889


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-------------------
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-------------------  147 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------------  147 (238)
                      |.|+.......    ..+ ....+++|+.++..++..+...      +.+++++||.....                   
T Consensus        79 ~~a~~~~~~~~----~~~-~~~~~~~N~~g~~nll~~~~~~------~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~  147 (346)
T d1oc2a_          79 HYAAESHNDNS----LND-PSPFIHTNFIGTYTLLEAARKY------DIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKF  147 (346)
T ss_dssp             ECCSCCCHHHH----HHC-CHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSB
T ss_pred             hhhhcccccch----hhC-cccceeeehHhHHhhhhhhccc------cccccccccceEecccCccccccccccCccccc
Confidence            99876543211    111 3455789999999998877443      23677776654321                   


Q ss_pred             ----cCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC---------CCccCCcccCCCCCC
Q psy14567        148 ----ALEGHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD---------PAKAGPMLAKTPLGR  214 (238)
Q Consensus       148 ----~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~r  214 (238)
                          +..+...|+.+|.+.+.+++.+..+.   ++++..+.|+.+..|........         .............+.
T Consensus       148 ~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~  224 (346)
T d1oc2a_         148 TAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRD  224 (346)
T ss_dssp             CTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEE
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCcccc
Confidence                11234679999999999999888775   78999999999988643211000         000111112233344


Q ss_pred             cCCCCCccccccccccc
Q psy14567        215 FAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       215 ~~~~~~ia~~~~~l~s~  231 (238)
                      +...+|++++++.+..+
T Consensus       225 ~i~v~D~a~a~~~~~~~  241 (346)
T d1oc2a_         225 WIHTNDHSTGVWAILTK  241 (346)
T ss_dssp             CEEHHHHHHHHHHHHHH
T ss_pred             ccchhhHHHHHHHHHhh
Confidence            56677777776665443

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.2e-13  Score=110.27  Aligned_cols=166  Identities=13%  Similarity=0.065  Sum_probs=120.4

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCC----------hHhHHHHHh-hCCCceEEEeecCCHHHHHHHHHhcCCc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT----------QANLDSLKQ-AFPNVQTVQVDLQDWARTRAAVSKVGPV   82 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~----------~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~g~i   82 (238)
                      .|+||||+|-||.+++++|++.|++|+.+++.          .+..+.+.. ...++.++.+|++|.+++++++... ++
T Consensus         4 KILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-~~   82 (346)
T d1ek6a_           4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-SF   82 (346)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-CE
T ss_pred             eEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc-cc
Confidence            45899999999999999999999999988531          122333322 2357899999999999999988765 58


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc------------CC
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA------------LE  150 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------~~  150 (238)
                      ++++|+|+.....    ....+ ....+++|+.++..+++++..    .+ -.++++.||......            ..
T Consensus        83 ~~i~h~Aa~~~~~----~~~~~-p~~~~~~Nv~gt~~l~~~~~~----~~-v~~~i~~ss~~~~~~~~~~~~~~~~~~~~  152 (346)
T d1ek6a_          83 MAVIHFAGLKAVG----ESVQK-PLDYYRVNLTGTIQLLEIMKA----HG-VKNLVFSSSATVYGNPQYLPLDEAHPTGG  152 (346)
T ss_dssp             EEEEECCSCCCHH----HHHHC-HHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred             ccccccccccCcH----hhHhC-HHHHHHhhhcccccccchhhh----cC-cccccccccceeeeccccccccccccccc
Confidence            8999999875421    11222 355678999999998888743    22 347888877654221            12


Q ss_pred             CCchhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        151 GHTIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       151 ~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      ....|+.+|...+..++.++...  .+.....+.|+.+..+.
T Consensus       153 ~~~~Y~~~k~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~  192 (346)
T d1ek6a_         153 CTNPYGKSKFFIEEMIRDLCQAD--KTWNAVLLRYFNPTGAH  192 (346)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHC--TTCEEEEEEECEEECCC
T ss_pred             cCChHHHHHHHHHHHHHHHHHhc--cCCceEEEeecceeccC
Confidence            34589999999999988876542  36778888888887754

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.49  E-value=1e-14  Score=118.30  Aligned_cols=201  Identities=18%  Similarity=0.116  Sum_probs=136.1

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEE------ecC-----ChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIA------LSK-----TQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~------~~r-----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      ++||||+|.||++++++|+++|+.|..      .++     +...+..+ ....++.++..|.++.+.......   .+|
T Consensus         3 IlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~---~~d   78 (322)
T d1r6da_           3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLARELR---GVD   78 (322)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHTT---TCC
T ss_pred             EEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhcccc---ccc
Confidence            589999999999999999999875433      321     22222222 233578999999999887665543   689


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCCC
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEGH  152 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~  152 (238)
                      .++|+|+......    .... ....+++|+.++..+++++..    .+ ..++|++||.....           +..+.
T Consensus        79 ~vi~~a~~~~~~~----~~~~-~~~~~~~N~~gt~~ll~~~~~----~~-~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~  148 (322)
T d1r6da_          79 AIVHFAAESHVDR----SIAG-ASVFTETNVQGTQTLLQCAVD----AG-VGRVVHVSTNQVYGSIDSGSWTESSPLEPN  148 (322)
T ss_dssp             EEEECCSCCCHHH----HHHC-CHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEEEEGGGGCCCSSSCBCTTSCCCCC
T ss_pred             eEEeecccccccc----cccc-hHHHhhhhHHHHHHHHHHHHH----cC-CceEEEeecceeecCCCCCCCCCCCCCCCC
Confidence            9999998653211    1222 455578999999999998853    22 35899998876422           22345


Q ss_pred             chhhHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCCccCC---------cccCCCCCCcCCCCCccc
Q psy14567        153 TIYSASKAALDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPAKAGP---------MLAKTPLGRFAGKLKPKP  223 (238)
Q Consensus       153 ~~y~~sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~~r~~~~~~ia~  223 (238)
                      ..|+.+|.+.+.+++.++++.   |+.+..+.|+.+-.|........+.+...         .......+-+...+|+|+
T Consensus       149 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~  225 (322)
T d1r6da_         149 SPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR  225 (322)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHH
Confidence            799999999999999998876   68899999999988753211000011111         111122234567888888


Q ss_pred             ccccccccc
Q psy14567        224 WNRWLLPSV  232 (238)
Q Consensus       224 ~~~~l~s~~  232 (238)
                      ++..++...
T Consensus       226 ai~~~~~~~  234 (322)
T d1r6da_         226 GIALVLAGG  234 (322)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHhCC
Confidence            888877664

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=3e-13  Score=104.52  Aligned_cols=193  Identities=12%  Similarity=0.106  Sum_probs=125.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      .+.++||||||.||++++++|.++|.  +|++++|++.....  ....++....+|+.+.+++.   +.+...|++||++
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~--~~~~~i~~~~~D~~~~~~~~---~~~~~~d~vi~~~   88 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE--EAYKNVNQEVVDFEKLDDYA---SAFQGHDVGFCCL   88 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS--GGGGGCEEEECCGGGGGGGG---GGGSSCSEEEECC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc--cccceeeeeeeccccccccc---ccccccccccccc
Confidence            35688999999999999999999995  89999997654322  12235677778887765544   4444689999999


Q ss_pred             CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHH
Q psy14567         90 AVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTM  169 (238)
Q Consensus        90 g~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l  169 (238)
                      |....       ... .....++|+..+..+.+.+..    .+ -.+++++|+......  ....|+.+|...+...+. 
T Consensus        89 ~~~~~-------~~~-~~~~~~~~~~~~~~~~~~a~~----~~-v~~fi~~Ss~~~~~~--~~~~Y~~~K~~~E~~l~~-  152 (232)
T d2bkaa1          89 GTTRG-------KAG-AEGFVRVDRDYVLKSAELAKA----GG-CKHFNLLSSKGADKS--SNFLYLQVKGEVEAKVEE-  152 (232)
T ss_dssp             CCCHH-------HHH-HHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCCTT--CSSHHHHHHHHHHHHHHT-
T ss_pred             ccccc-------ccc-hhhhhhhcccccceeeecccc----cC-ccccccCCccccccC--ccchhHHHHHHhhhcccc-
Confidence            85421       122 455567899898888887743    33 458999998876433  345799999888765533 


Q ss_pred             HHHhCCCCe-EEEEEeCCceecCcccCCCCC---CCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        170 ALELGPYNI-RVNSVQPTVVMTQMGRTGWSD---PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       170 ~~~~~~~~i-~v~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                         +   +. ++..+.||++-.+........   ......+.......+..+.+|+|++++..+.+
T Consensus       153 ---~---~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~  212 (232)
T d2bkaa1         153 ---L---KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVR  212 (232)
T ss_dssp             ---T---CCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTS
T ss_pred             ---c---cccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhc
Confidence               2   22 467789999988753321000   00001111111122345678999987766544

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.26  E-value=9.9e-13  Score=100.03  Aligned_cols=186  Identities=9%  Similarity=0.061  Sum_probs=115.9

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCccEEEEc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVDVLINN   88 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id~li~~   88 (238)
                      .+.++||||||.||++++++|.++|+  +|+..+|+...         ...-+..+..|..++   .+.+ +.+|.+|++
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~---------~~~~~~~~~~d~~~~---~~~~~~~~d~vi~~   69 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------EHPRLDNPVGPLAEL---LPQLDGSIDTAFCC   69 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------CCTTEECCBSCHHHH---GGGCCSCCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh---------hcccccccccchhhh---hhccccchheeeee
Confidence            35678999999999999999999997  67777775421         111234555555443   3333 568999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRT  168 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~  168 (238)
                      +|......   .+    -....++|+.++..+.+++.    +.+ -.+++++||..+..  .....|..+|...+...+ 
T Consensus        70 ~g~~~~~~---~~----~~~~~~~~~~~~~~~~~~a~----~~~-v~~~i~~Ss~~~~~--~~~~~y~~~K~~~E~~l~-  134 (212)
T d2a35a1          70 LGTTIKEA---GS----EEAFRAVDFDLPLAVGKRAL----EMG-ARHYLVVSALGADA--KSSIFYNRVKGELEQALQ-  134 (212)
T ss_dssp             CCCCHHHH---SS----HHHHHHHHTHHHHHHHHHHH----HTT-CCEEEEECCTTCCT--TCSSHHHHHHHHHHHHHT-
T ss_pred             eeeecccc---cc----ccccccchhhhhhhcccccc----ccc-cccccccccccccc--ccccchhHHHHHHhhhcc-
Confidence            98653211   11    24456788888888888763    233 46899999876543  334689999988776543 


Q ss_pred             HHHHhCCCCe-EEEEEeCCceecCcccCCCCCCCccCCcccCCCCC--CcCCCCCcccccccccccc
Q psy14567        169 MALELGPYNI-RVNSVQPTVVMTQMGRTGWSDPAKAGPMLAKTPLG--RFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       169 l~~~~~~~~i-~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--r~~~~~~ia~~~~~l~s~~  232 (238)
                            ..+. +...+.|+++..+.....  ..............+  +....+|+|+++++++.+.
T Consensus       135 ------~~~~~~~~I~Rp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~  193 (212)
T d2a35a1         135 ------EQGWPQLTIARPSLLFGPREEFR--LAEILAAPIARILPGKYHGIEACDLARALWRLALEE  193 (212)
T ss_dssp             ------TSCCSEEEEEECCSEESTTSCEE--GGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             ------ccccccceeeCCcceeCCccccc--HHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCC
Confidence                  2233 577889999987653210  001111100111112  2357789999988887664

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.24  E-value=3.8e-11  Score=94.53  Aligned_cols=142  Identities=17%  Similarity=0.178  Sum_probs=99.5

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARF   94 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~   94 (238)
                      ++||||||.||.+++++|.++|++|+.++|++                 +|++|.++++++++.. ++|++||+|+....
T Consensus         4 IlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------~D~~d~~~~~~~l~~~-~~d~vih~a~~~~~   65 (281)
T d1vl0a_           4 ILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------LDITNVLAVNKFFNEK-KPNVVINCAAHTAV   65 (281)
T ss_dssp             EEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------CCTTCHHHHHHHHHHH-CCSEEEECCCCCCH
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------ccCCCHHHHHHHHHHc-CCCEEEeecccccc
Confidence            68999999999999999999999999999864                 5899999999999876 58999999986542


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccc-----------ccCCCCchhhHHHHHHH
Q psy14567         95 DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGK-----------TALEGHTIYSASKAALD  163 (238)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-----------~~~~~~~~y~~sK~al~  163 (238)
                      ..    .... ....+..|+.....+...+...      ...+++.||....           .+..+...|+.+|...+
T Consensus        66 ~~----~~~~-~~~~~~~n~~~~~~~~~~~~~~------~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e  134 (281)
T d1vl0a_          66 DK----CEEQ-YDLAYKINAIGPKNLAAAAYSV------GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGE  134 (281)
T ss_dssp             HH----HHHC-HHHHHHHHTHHHHHHHHHHHHH------TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred             cc----cccc-chhhcccccccccccccccccc------cccccccccceeeeccccccccccccccchhhhhhhhhHHH
Confidence            11    1111 3444566776666665554332      2355566554321           12335678899998877


Q ss_pred             HHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        164 SITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       164 ~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      .+++..       +.+...+.|+.+-.+-
T Consensus       135 ~~~~~~-------~~~~~i~R~~~vyG~~  156 (281)
T d1vl0a_         135 NFVKAL-------NPKYYIVRTAWLYGDG  156 (281)
T ss_dssp             HHHHHH-------CSSEEEEEECSEESSS
T ss_pred             HHHHHh-------CCCccccceeEEeCCC
Confidence            766432       3456678888886653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.22  E-value=1.6e-11  Score=97.31  Aligned_cols=128  Identities=16%  Similarity=0.080  Sum_probs=91.3

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARF   94 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~   94 (238)
                      ++||||+|-||++++++|.+.|..|.+..|+.+              +..|++|.+.++++++.. ++|+|||+||....
T Consensus         3 ILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~~--------------~~~Dl~~~~~~~~~i~~~-~~D~Vih~Aa~~~~   67 (298)
T d1n2sa_           3 ILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE--------------FCGDFSNPKGVAETVRKL-RPDVIVNAAAHTAV   67 (298)
T ss_dssp             EEEECTTSHHHHHHHHHTTTTSEEEEECTTCSS--------------SCCCTTCHHHHHHHHHHH-CCSEEEECCCCCCH
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEEEEECCCcc--------------ccCcCCCHHHHHHHHHHc-CCCEEEEecccccc
Confidence            689999999999999999999875554433321              347999999999999876 58999999997643


Q ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc-----------cCCCCchhhHHHHHHH
Q psy14567         95 DRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT-----------ALEGHTIYSASKAALD  163 (238)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-----------~~~~~~~y~~sK~al~  163 (238)
                      .... .+    -...+++|+.++..+.+++.    +.  +.+++++||.....           +..+...|+.+|.+.+
T Consensus        68 ~~~~-~~----~~~~~~~n~~~~~~l~~~~~----~~--~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e  136 (298)
T d1n2sa_          68 DKAE-SE----PELAQLLNATSVEAIAKAAN----ET--GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGE  136 (298)
T ss_dssp             HHHT-TC----HHHHHHHHTHHHHHHHHHHT----TT--TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHH
T ss_pred             cccc-cC----ccccccccccccccchhhhh----cc--ccccccccccccccCCCCCCCccccccCCCchHhhhhhhhh
Confidence            2221 11    24456889999988888763    22  35677777754321           2234568999998887


Q ss_pred             HHHHH
Q psy14567        164 SITRT  168 (238)
Q Consensus       164 ~l~~~  168 (238)
                      .+.+.
T Consensus       137 ~~~~~  141 (298)
T d1n2sa_         137 KALQD  141 (298)
T ss_dssp             HHHHH
T ss_pred             hhHHh
Confidence            76644

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.08  E-value=2e-10  Score=91.30  Aligned_cols=188  Identities=12%  Similarity=-0.009  Sum_probs=108.2

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh-----HHHHHh-hCCCceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN-----LDSLKQ-AFPNVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      +.|+||||||.||++++++|.++|++|++++|+...     .+.+.. ...+++++.+|++|.+++.+.++   ..+.++
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~---~~~~~~   80 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK---QVDVVI   80 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT---TCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc---Ccchhh
Confidence            337899999999999999999999999999997532     222221 22468999999999999888776   468888


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-----CCCCchhhHHHHH
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-----LEGHTIYSASKAA  161 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----~~~~~~y~~sK~a  161 (238)
                      ++++.....    ....            +...++.++    .+.. ..++++.||......     ..+...|..+|..
T Consensus        81 ~~~~~~~~~----~~~~------------~~~~~l~~a----~~~~-~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~  139 (312)
T d1qyda_          81 SALAGGVLS----HHIL------------EQLKLVEAI----KEAG-NIKRFLPSEFGMDPDIMEHALQPGSITFIDKRK  139 (312)
T ss_dssp             ECCCCSSSS----TTTT------------THHHHHHHH----HHSC-CCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHH
T ss_pred             hhhhhcccc----cchh------------hhhHHHHHH----HHhc-CCcEEEEeeccccCCCcccccchhhhhhHHHHH
Confidence            888654221    1111            111222222    2222 356677776544322     1223344444444


Q ss_pred             HHHHHHHHHHHhCCCCeEEEEEeCCceecCcccCCCCC-------CCccCCcccCCCCCCcCCCCCccccccccccc
Q psy14567        162 LDSITRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSD-------PAKAGPMLAKTPLGRFAGKLKPKPWNRWLLPS  231 (238)
Q Consensus       162 l~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~  231 (238)
                      .+.    ...+   .++....+.||.+..+........       .+....+.......-+...+|+|++++.++.+
T Consensus       140 ~~~----~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~  209 (312)
T d1qyda_         140 VRR----AIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDD  209 (312)
T ss_dssp             HHH----HHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTC
T ss_pred             HHH----hhcc---cccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcC
Confidence            433    2222   356777788888865433211000       00000111111222356778898888877655

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.04  E-value=4.2e-10  Score=88.87  Aligned_cols=189  Identities=13%  Similarity=0.003  Sum_probs=112.0

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh------HHHHHh-hCCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN------LDSLKQ-AFPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      +.++||||||.||++++++|.++|++|++++|+...      .+.+.. ....+.++.+|+.+.++..+.++   ..+.+
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~v   80 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK---NVDVV   80 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH---TCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh---hceee
Confidence            457899999999999999999999999999987543      212221 22468899999999998888777   46888


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHH
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSI  165 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l  165 (238)
                      +++++.....                    +...+.+++.    ... ..++++.||............+...+......
T Consensus        81 i~~~~~~~~~--------------------~~~~~~~a~~----~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  135 (307)
T d1qyca_          81 ISTVGSLQIE--------------------SQVNIIKAIK----EVG-TVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAK  135 (307)
T ss_dssp             EECCCGGGSG--------------------GGHHHHHHHH----HHC-CCSEEECSCCSSCTTSCCCCTTHHHHHHHHHH
T ss_pred             eecccccccc--------------------hhhHHHHHHH----Hhc-cccceeeecccccccccccccccccccccccc
Confidence            8888654211                    1111122222    222 34667777655444333333344333333333


Q ss_pred             HHHHHHHhCCCCeEEEEEeCCceecCcccCCCCCCC------ccCCcccCCCCCCcCCCCCcccccccccccc
Q psy14567        166 TRTMALELGPYNIRVNSVQPTVVMTQMGRTGWSDPA------KAGPMLAKTPLGRFAGKLKPKPWNRWLLPSV  232 (238)
Q Consensus       166 ~~~l~~~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~------~~~~~~~~~~~~r~~~~~~ia~~~~~l~s~~  232 (238)
                      ......+   .++....+.|+.+..+..........      .............+...+|+|++++.++.+.
T Consensus       136 ~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  205 (307)
T d1qyca_         136 VRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP  205 (307)
T ss_dssp             HHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG
T ss_pred             ccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcCh
Confidence            3332233   35677888998887654322111100      0001112223344678899999998888653

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.98  E-value=7.6e-09  Score=83.87  Aligned_cols=150  Identities=13%  Similarity=0.030  Sum_probs=97.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHH-HHhhCCCceEEEeecCCHHH-HHHHHHhcCCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDS-LKQAFPNVQTVQVDLQDWAR-TRAAVSKVGPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~D~~~~~~-v~~~~~~~g~id~li~~   88 (238)
                      +.++|+||||||.||.+++++|.++|++|+++.|+.++... .....++++++++|+.|..+ ++.+++   ..|.++.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~---~~~~~~~~   78 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE---GAHLAFIN   78 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT---TCSEEEEC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhc---CCceEEee
Confidence            56889999999999999999999999999999998765432 22344679999999998655 444544   46777665


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccc--cCCCCchhhHHHHHHHHHH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKT--ALEGHTIYSASKAALDSIT  166 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~~~~~~y~~sK~al~~l~  166 (238)
                      .....      ..           ++.....++.++.    +.+ ..+++..||.....  +......|..+|...+.+.
T Consensus        79 ~~~~~------~~-----------~~~~~~~~~~aa~----~ag-v~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~  136 (350)
T d1xgka_          79 TTSQA------GD-----------EIAIGKDLADAAK----RAG-TIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYV  136 (350)
T ss_dssp             CCSTT------SC-----------HHHHHHHHHHHHH----HHS-CCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHH
T ss_pred             ccccc------ch-----------hhhhhhHHHHHHH----HhC-CCceEEEeeccccccCCcccchhhhhhHHHHHHHH
Confidence            43211      01           1112223344432    222 34677777765433  3334567778887666544


Q ss_pred             HHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        167 RTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       167 ~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      +.       .++....+.|+.+..+.
T Consensus       137 ~~-------~~~~~~~vr~~~~~~~~  155 (350)
T d1xgka_         137 RQ-------LGLPSTFVYAGIYNNNF  155 (350)
T ss_dssp             HT-------SSSCEEEEEECEEGGGC
T ss_pred             Hh-------hccCceeeeeceeeccc
Confidence            33       24667788888876654

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.98  E-value=1.2e-09  Score=86.47  Aligned_cols=156  Identities=17%  Similarity=0.105  Sum_probs=97.4

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-EEEEecCC--hHhHHHHHhhCCCceEEEeecCCHHHHHH-HH--HhcCCccEEEEc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-IIIALSKT--QANLDSLKQAFPNVQTVQVDLQDWARTRA-AV--SKVGPVDVLINN   88 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~--~~~~~~~~~~~~~~~~~~~D~~~~~~v~~-~~--~~~g~id~li~~   88 (238)
                      |+||||+|.||++++++|++.|+ .|+.+++-  ..+...+..      ...+|..+.+.... ..  ..+...++++|.
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   75 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD------LNIADYMDKEDFLIQIMAGEEFGDVEAIFHE   75 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT------SCCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc------cchhhhccchHHHHHHhhhhcccchhhhhhh
Confidence            68999999999999999999997 57776522  222222221      11234444343333 33  233678999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcccccccc-----------CCCCchhhH
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTA-----------LEGHTIYSA  157 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~y~~  157 (238)
                      |+.....   ..+    .+...+.|+.+...+++++...    +  -++++.||.....+           ..+...|+.
T Consensus        76 aa~~~~~---~~~----~~~~~~~~~~~~~~~l~~~~~~----~--i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~  142 (307)
T d1eq2a_          76 GACSSTT---EWD----GKYMMDNNYQYSKELLHYCLER----E--IPFLYASSAATYGGRTSDFIESREYEKPLNVYGY  142 (307)
T ss_dssp             CSCCCTT---CCC----HHHHHHHTHHHHHHHHHHHHHH----T--CCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHH
T ss_pred             ccccccc---ccc----cccccccccccccccccccccc----c--cccccccccccccccccccccccccccccccccc
Confidence            8754321   112    2444567777877777765432    2  23455544443221           235678999


Q ss_pred             HHHHHHHHHHHHHHHhCCCCeEEEEEeCCceecCc
Q psy14567        158 SKAALDSITRTMALELGPYNIRVNSVQPTVVMTQM  192 (238)
Q Consensus       158 sK~al~~l~~~l~~~~~~~~i~v~~i~PG~v~t~~  192 (238)
                      +|.+.+.+++.+..+.   ++.+..+.|..+..|.
T Consensus       143 ~K~~~e~~~~~~~~~~---~~~~~~~r~~~vyGp~  174 (307)
T d1eq2a_         143 SKFLFDEYVRQILPEA---NSQIVGFRYFNVYGPR  174 (307)
T ss_dssp             HHHHHHHHHHHHGGGC---SSCEEEEEECEEESSS
T ss_pred             ccchhhhhcccccccc---ccccccccceeEeecc
Confidence            9999999998886664   5677777888777664

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.78  E-value=1.5e-13  Score=103.16  Aligned_cols=42  Identities=10%  Similarity=0.086  Sum_probs=37.1

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF   56 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (238)
                      ++|+||+|+||.++|+.|++.|++|++.+|++++++++.+++
T Consensus         3 i~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i   44 (212)
T d1jaya_           3 VALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            456788899999999999999999999999999888776655

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.22  E-value=1.9e-06  Score=62.90  Aligned_cols=78  Identities=12%  Similarity=0.098  Sum_probs=57.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++|+||+||+|.+.++.....|++|+.+++++++.+.+++......   .|..+++..+...+..  +.+|++++
T Consensus        28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~v---i~~~~~~~~~~~~~~~~~~Gvd~v~D  104 (182)
T d1v3va2          28 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDAA---FNYKTVNSLEEALKKASPDGYDCYFD  104 (182)
T ss_dssp             CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSEE---EETTSCSCHHHHHHHHCTTCEEEEEE
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhhh---cccccccHHHHHHHHhhcCCCceeEE
Confidence            456678999999999999999999999999999999998877776654332   2333333333333222  45999999


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      +.|
T Consensus       105 ~vG  107 (182)
T d1v3va2         105 NVG  107 (182)
T ss_dssp             SSC
T ss_pred             ecC
Confidence            987

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=3.6e-06  Score=60.91  Aligned_cols=78  Identities=12%  Similarity=0.057  Sum_probs=58.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++|+||+|++|...++.+...|++|+++++++++.+.+++.... .+  .|.++++..+++.+..  ..+|+++.
T Consensus        27 ~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga~-~v--i~~~~~~~~~~i~~~t~~~g~d~v~d  103 (174)
T d1yb5a2          27 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGAH-EV--FNHREVNYIDKIKKYVGEKGIDIIIE  103 (174)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-EE--EETTSTTHHHHHHHHHCTTCEEEEEE
T ss_pred             CCCCEEEEEeccccccccccccccccCcccccccccccccccccccCcc-cc--cccccccHHHHhhhhhccCCceEEee
Confidence            4556789999999999999999999999999999998887777654332 22  4666665555554444  35899998


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      +.|
T Consensus       104 ~~g  106 (174)
T d1yb5a2         104 MLA  106 (174)
T ss_dssp             SCH
T ss_pred             ccc
Confidence            875

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.02  E-value=8.6e-06  Score=58.71  Aligned_cols=72  Identities=15%  Similarity=0.102  Sum_probs=57.8

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      .++|-|| |.+|+.+|+.|+++|++|++.+|+.++++++.+..+.......+..+.....+.+.   ..|.++...
T Consensus         4 ~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~---~~~~~i~~~   75 (182)
T d1e5qa1           4 SVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVA---KHDLVISLI   75 (182)
T ss_dssp             EEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHT---TSSEEEECS
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhh---ccceeEeec
Confidence            3444565 89999999999999999999999999999999988877777777777777766665   356666544

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.01  E-value=7.3e-06  Score=59.61  Aligned_cols=78  Identities=17%  Similarity=0.052  Sum_probs=58.5

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      +...+++|+||+|++|...+..+...|++|+++++++++.+.+++.+.. ..  .|.++++-.+++.+..  .++|+++.
T Consensus        24 ~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga~-~v--i~~~~~~~~~~v~~~t~~~g~d~v~d  100 (183)
T d1pqwa_          24 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVE-YV--GDSRSVDFADEILELTDGYGVDVVLN  100 (183)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCS-EE--EETTCSTHHHHHHHHTTTCCEEEEEE
T ss_pred             CCCCEEEEECCCCCcccccchhhccccccceeeeccccccccccccccc-cc--ccCCccCHHHHHHHHhCCCCEEEEEe
Confidence            4456789999999999999999988999999999999888777654433 22  4555554444444443  35999999


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      +.|
T Consensus       101 ~~g  103 (183)
T d1pqwa_         101 SLA  103 (183)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            887

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.97  E-value=7.7e-06  Score=59.29  Aligned_cols=78  Identities=12%  Similarity=-0.025  Sum_probs=59.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ...+++|+||+|++|..+++.....|++|+++++++++.+.+++...+.   ..|.++++-.+++.+..  ..+|+++.+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa~~---vi~~~~~d~~~~v~~~t~g~g~d~v~d~  104 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGAWQ---VINYREEDLVERLKEITGGKKVRVVYDS  104 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTCSE---EEETTTSCHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCCeE---EEECCCCCHHHHHHHHhCCCCeEEEEeC
Confidence            3457889999999999999999999999999999999998887765432   24666654444444333  358999888


Q ss_pred             cCC
Q psy14567         89 AAV   91 (238)
Q Consensus        89 ag~   91 (238)
                      .|.
T Consensus       105 ~g~  107 (179)
T d1qora2         105 VGR  107 (179)
T ss_dssp             SCG
T ss_pred             ccH
Confidence            873

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.88  E-value=9.7e-06  Score=58.46  Aligned_cols=75  Identities=8%  Similarity=0.013  Sum_probs=55.2

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +...+++|+||+|++|...+..+...|++|+.+++++++.+.+++...+.   ..|..+.   ....+.-+.+|+++.+.
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa~~---~i~~~~~---~~~~~~~~g~D~v~d~~   99 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGAEE---AATYAEV---PERAKAWGGLDLVLEVR   99 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTCSE---EEEGGGH---HHHHHHTTSEEEEEECS
T ss_pred             CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccccccce---eeehhhh---hhhhhcccccccccccc
Confidence            34557889999999999999998899999999999998887777654332   2354432   22333345699999976


Q ss_pred             C
Q psy14567         90 A   90 (238)
Q Consensus        90 g   90 (238)
                      |
T Consensus       100 G  100 (171)
T d1iz0a2         100 G  100 (171)
T ss_dssp             C
T ss_pred             c
Confidence            6

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.83  E-value=2.7e-05  Score=56.88  Aligned_cols=83  Identities=13%  Similarity=0.047  Sum_probs=56.2

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCE-EEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc-CCcc
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAI-IIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV-GPVD   83 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~-g~id   83 (238)
                      .+++....+++|+||+||+|...++-....|++ |+.+++++++...+....+.-.+  .|.++++..+.+-+.. ..+|
T Consensus        25 ~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v--i~~~~~~~~~~~~~~~~~GvD  102 (187)
T d1vj1a2          25 HISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA--VNYKTGNVAEQLREACPGGVD  102 (187)
T ss_dssp             CCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE--EETTSSCHHHHHHHHCTTCEE
T ss_pred             CCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE--eeccchhHHHHHHHHhccCce
Confidence            445545578999999999999999988889985 55567787777777766654333  3444433222222211 3599


Q ss_pred             EEEEccC
Q psy14567         84 VLINNAA   90 (238)
Q Consensus        84 ~li~~ag   90 (238)
                      +++.+.|
T Consensus       103 vv~D~vG  109 (187)
T d1vj1a2         103 VYFDNVG  109 (187)
T ss_dssp             EEEESSC
T ss_pred             EEEecCC
Confidence            9999887

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.82  E-value=1.4e-05  Score=57.87  Aligned_cols=77  Identities=12%  Similarity=0.044  Sum_probs=54.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ...+++|+||+||+|...++-....|++|+.+++++++.+.+.+...+. .+  |-++.  ..+.++..  +++|+++.+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~-vi--~~~~~--~~~~~~~~~~~gvD~vid~  105 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKE-VL--AREDV--MAERIRPLDKQRWAAAVDP  105 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSE-EE--ECC-----------CCSCCEEEEEEC
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccce-ee--ecchh--HHHHHHHhhccCcCEEEEc
Confidence            4568899999999999999998899999999999999988777665443 22  33222  12233333  469999999


Q ss_pred             cCCC
Q psy14567         89 AAVA   92 (238)
Q Consensus        89 ag~~   92 (238)
                      .|..
T Consensus       106 vgg~  109 (176)
T d1xa0a2         106 VGGR  109 (176)
T ss_dssp             STTT
T ss_pred             CCch
Confidence            9843

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.78  E-value=2.2e-05  Score=53.94  Aligned_cols=69  Identities=12%  Similarity=0.063  Sum_probs=55.8

Q ss_pred             CCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      +|.|+ |.+|+.+++.|.+.|..|++++++++..+++.++. +..++..|.++++.++++  .+.+.|.++..
T Consensus         4 vI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-~~~vi~Gd~~~~~~l~~~--~i~~a~~vv~~   72 (132)
T d1lssa_           4 IIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-DALVINGDCTKIKTLEDA--GIEDADMYIAV   72 (132)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-SSEEEESCTTSHHHHHHT--TTTTCSEEEEC
T ss_pred             EEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-hhhhccCcccchhhhhhc--Chhhhhhhccc
Confidence            45566 88999999999999999999999999999888776 577899999999876655  12246777654

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=1.1e-05  Score=49.93  Aligned_cols=47  Identities=17%  Similarity=0.148  Sum_probs=40.6

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA   55 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (238)
                      .++...++|+||+||+|...+..+...|++|+.+.+++++.+-+++.
T Consensus        29 ~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~~l   75 (77)
T d1o8ca2          29 RPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSL   75 (77)
T ss_dssp             CGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHH
T ss_pred             ccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHHHC
Confidence            34666789999999999999998888999999999999888777653

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.76  E-value=3.7e-05  Score=55.81  Aligned_cols=80  Identities=13%  Similarity=0.013  Sum_probs=54.9

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh-c--CCccEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK-V--GPVDVL   85 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-~--g~id~l   85 (238)
                      +...+++|.|+ |+||...+..+...|+ +|+++++++++++.+++.... .++...-.+..+..+.+.+ .  ..+|++
T Consensus        27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~vi~~~~~~~~~~~~~i~~~~~~~g~Dvv  104 (182)
T d1vj0a2          27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD-LTLNRRETSVEERRKAIMDITHGRGADFI  104 (182)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCS-EEEETTTSCHHHHHHHHHHHTTTSCEEEE
T ss_pred             CCCCEEEEECC-Cccchhheecccccccccccccccccccccccccccce-EEEeccccchHHHHHHHHHhhCCCCceEE
Confidence            34567788886 8999999999999998 899999999998777654432 2332222333333333333 2  249999


Q ss_pred             EEccCC
Q psy14567         86 INNAAV   91 (238)
Q Consensus        86 i~~ag~   91 (238)
                      |.++|.
T Consensus       105 id~vG~  110 (182)
T d1vj0a2         105 LEATGD  110 (182)
T ss_dssp             EECSSC
T ss_pred             eecCCc
Confidence            999875

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.74  E-value=0.00017  Score=50.11  Aligned_cols=113  Identities=16%  Similarity=0.125  Sum_probs=65.0

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhCCC-ceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAFPN-VQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      +.|.||+|.+|.++|..|+..|.  ++++++.++.+.+...-.... ......-+ ...+..+.++   .-|++|..+|.
T Consensus         3 v~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~-~~~~~~~~~~---~aDivVitag~   78 (144)
T d1mlda1           3 VAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYL-GPEQLPDCLK---GCDVVVIPAGV   78 (144)
T ss_dssp             EEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEE-SGGGHHHHHT---TCSEEEECCSC
T ss_pred             EEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEE-cCCChHHHhC---CCCEEEECCCc
Confidence            35679999999999999998885  799999887654332211111 11111112 2222223333   46999999996


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         92 ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      ... +  .++..+    .++.|..-.    +...+.+.+..+.+.++.+|.
T Consensus        79 ~~~-~--g~sR~~----ll~~N~~i~----~~i~~~i~~~~p~~iiivvtN  118 (144)
T d1mlda1          79 PRK-P--GMTRDD----LFNTNATIV----ATLTAACAQHCPDAMICIISN  118 (144)
T ss_dssp             CCC-T--TCCGGG----GHHHHHHHH----HHHHHHHHHHCTTSEEEECSS
T ss_pred             CCC-C--CCCcch----HHHHHHHHH----HHHHHHHHhcCCCeEEEEecC
Confidence            432 1  223332    245555554    445555555544567776654

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.71  E-value=4.8e-05  Score=54.46  Aligned_cols=81  Identities=15%  Similarity=0.074  Sum_probs=57.1

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeec--CCHHHHHHHHHh-c-CCccE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDL--QDWARTRAAVSK-V-GPVDV   84 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~--~~~~~v~~~~~~-~-g~id~   84 (238)
                      .+...+++|+| +|+||...+..+...|++|+++++++++++..++...... +..|.  .+.+++.+.++. . +.+|+
T Consensus        24 ~~~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~-~~~~~~~~~~~~~~~~~~~~~g~g~D~  101 (170)
T d1e3ja2          24 VQLGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVT-LVVDPAKEEESSIIERIRSAIGDLPNV  101 (170)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEE-EECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred             CCCCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEE-EeccccccccchhhhhhhcccccCCce
Confidence            34445667776 6899999999998999999999999999887776554433 33333  233444444433 3 36899


Q ss_pred             EEEccCC
Q psy14567         85 LINNAAV   91 (238)
Q Consensus        85 li~~ag~   91 (238)
                      +|.++|.
T Consensus       102 vid~~g~  108 (170)
T d1e3ja2         102 TIDCSGN  108 (170)
T ss_dssp             EEECSCC
T ss_pred             eeecCCC
Confidence            9999984

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.69  E-value=2.7e-05  Score=55.31  Aligned_cols=74  Identities=12%  Similarity=0.141  Sum_probs=55.7

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      ..+.+.++|.|+ |++|..+++.|...|+ ++.++.|+.++.+++..+++ ...  .+   .+++.+.+.   ..|++|+
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~-~~~--~~---~~~~~~~l~---~~Divi~   90 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG-GEA--VR---FDELVDHLA---RSDVVVS   90 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT-CEE--CC---GGGHHHHHH---TCSEEEE
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh-ccc--cc---chhHHHHhc---cCCEEEE
Confidence            345556666787 9999999999999998 79999999999998888764 222  22   334555555   4799999


Q ss_pred             ccCCC
Q psy14567         88 NAAVA   92 (238)
Q Consensus        88 ~ag~~   92 (238)
                      +.+..
T Consensus        91 atss~   95 (159)
T d1gpja2          91 ATAAP   95 (159)
T ss_dssp             CCSSS
T ss_pred             ecCCC
Confidence            99854

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.64  E-value=5.3e-05  Score=54.23  Aligned_cols=81  Identities=16%  Similarity=0.081  Sum_probs=59.6

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccE
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDV   84 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~   84 (238)
                      +.+...+++|.|++|++|..++..+...|+ +|+++++++++.+.+++..... .  .|.++++..++..+..  +.+|+
T Consensus        24 ~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~-~--i~~~~~~~~~~~~~~~~~~~~d~  100 (170)
T d1jvba2          24 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADY-V--INASMQDPLAEIRRITESKGVDA  100 (170)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSE-E--EETTTSCHHHHHHHHTTTSCEEE
T ss_pred             CCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCce-e--eccCCcCHHHHHHHHhhcccchh
Confidence            344556788999999999999999988885 8999999999988887665332 2  3445544455555444  45999


Q ss_pred             EEEccCC
Q psy14567         85 LINNAAV   91 (238)
Q Consensus        85 li~~ag~   91 (238)
                      +|.++|.
T Consensus       101 vid~~g~  107 (170)
T d1jvba2         101 VIDLNNS  107 (170)
T ss_dssp             EEESCCC
T ss_pred             hhccccc
Confidence            9999874

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.62  E-value=7.6e-06  Score=58.81  Aligned_cols=75  Identities=12%  Similarity=0.056  Sum_probs=54.4

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEcc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNA   89 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~a   89 (238)
                      ..+++|+||+||+|...++.....|++|+.+++++++.+.+.+...+..   .|-.  +...+..+..  +.+|+++.+.
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGad~v---i~~~--~~~~~~~~~~~~~gvd~vid~v   98 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGASEV---ISRE--DVYDGTLKALSKQQWQGAVDPV   98 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTCSEE---EEHH--HHCSSCCCSSCCCCEEEEEESC
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcccce---Eecc--chhchhhhcccCCCceEEEecC
Confidence            4478999999999999999888899999999999999888887765432   2221  1111112222  4699999988


Q ss_pred             CC
Q psy14567         90 AV   91 (238)
Q Consensus        90 g~   91 (238)
                      |.
T Consensus        99 gg  100 (167)
T d1tt7a2          99 GG  100 (167)
T ss_dssp             CT
T ss_pred             cH
Confidence            74

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.53  E-value=0.00024  Score=51.37  Aligned_cols=78  Identities=17%  Similarity=0.104  Sum_probs=56.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHh---hC---CCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQ---AF---PNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~---~~---~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      +.+.++|-|+ ||.|++++..|++.|. ++++..|+.++.+++..   ..   -.......|+.+.+++.+...   ..|
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d   92 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA---SAD   92 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---TCS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc---ccc
Confidence            3345566555 7999999999999998 78999998776554322   11   124456789988887766655   479


Q ss_pred             EEEEccCCC
Q psy14567         84 VLINNAAVA   92 (238)
Q Consensus        84 ~li~~ag~~   92 (238)
                      ++||+....
T Consensus        93 iiIN~Tp~G  101 (182)
T d1vi2a1          93 ILTNGTKVG  101 (182)
T ss_dssp             EEEECSSTT
T ss_pred             eeccccCCc
Confidence            999998654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=0.00015  Score=51.88  Aligned_cols=80  Identities=11%  Similarity=0.014  Sum_probs=57.3

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHH-hc-CCccEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVS-KV-GPVDVLI   86 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~-~~-g~id~li   86 (238)
                      +...+++|.|+ |++|...+..+...|+ +|+++++++++++-.++...+ ..+..+-.+..+..+.++ .. ..+|++|
T Consensus        25 ~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~-~~~~~~~~~~~~~~~~~~~~~g~g~Dvvi  102 (171)
T d1pl8a2          25 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGAD-LVLQISKESPQEIARKVEGQLGCKPEVTI  102 (171)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCS-EEEECSSCCHHHHHHHHHHHHTSCCSEEE
T ss_pred             CCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCc-ccccccccccccccccccccCCCCceEEE
Confidence            34456677776 9999999999999999 899999999998876654333 344444455555554443 33 3689999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .++|.
T Consensus       103 d~~G~  107 (171)
T d1pl8a2         103 ECTGA  107 (171)
T ss_dssp             ECSCC
T ss_pred             eccCC
Confidence            99984

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.45  E-value=0.00012  Score=52.73  Aligned_cols=78  Identities=10%  Similarity=-0.028  Sum_probs=55.6

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLI   86 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li   86 (238)
                      +...+++|.|+ ||+|...+..+...|+ +|+++++++++.+..++.... +  .+|.++++..+++.+..  ..+|++|
T Consensus        26 ~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~-~--~i~~~~~~~~~~v~~~t~g~G~D~vi  101 (174)
T d1jqba2          26 EMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGAT-D--ILNYKNGHIEDQVMKLTNGKGVDRVI  101 (174)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCS-E--EECGGGSCHHHHHHHHTTTSCEEEEE
T ss_pred             CCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCcc-c--cccccchhHHHHHHHHhhccCcceEE
Confidence            34556777776 8999999999998998 799999999988777765432 2  24555443344444433  2499999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .++|.
T Consensus       102 d~~g~  106 (174)
T d1jqba2         102 MAGGG  106 (174)
T ss_dssp             ECSSC
T ss_pred             EccCC
Confidence            99985

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=1.4e-05  Score=57.89  Aligned_cols=45  Identities=18%  Similarity=0.119  Sum_probs=39.7

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP   57 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   57 (238)
                      ..++|+||+||+|...++.....|++|+.++|++++.+.+.+...
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGa   77 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGA   77 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTE
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhcc
Confidence            368899999999999999999999999999999999887776543

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.38  E-value=0.00015  Score=52.03  Aligned_cols=80  Identities=16%  Similarity=0.155  Sum_probs=55.2

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCcc
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVD   83 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id   83 (238)
                      .+.+...+++|.|+ |+||...+..+...|+ .|+++++++++++..++... .++  .|..+++..+ .++++  +.+|
T Consensus        24 ~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga-~~~--i~~~~~~~~~-~i~~~t~gg~D   98 (174)
T d1f8fa2          24 LKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-THV--INSKTQDPVA-AIKEITDGGVN   98 (174)
T ss_dssp             TCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-SEE--EETTTSCHHH-HHHHHTTSCEE
T ss_pred             hCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCC-eEE--EeCCCcCHHH-HHHHHcCCCCc
Confidence            44556667788887 8999999999888888 55667888888877766542 233  3554433333 33333  5799


Q ss_pred             EEEEccCC
Q psy14567         84 VLINNAAV   91 (238)
Q Consensus        84 ~li~~ag~   91 (238)
                      ++|.+.|.
T Consensus        99 ~vid~~G~  106 (174)
T d1f8fa2          99 FALESTGS  106 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCc
Confidence            99999984

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.38  E-value=0.00085  Score=46.55  Aligned_cols=108  Identities=10%  Similarity=0.127  Sum_probs=61.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCC--CEEEEecCChHhHHH----HHh---hCCCceEEEeecCCHHHHHHHHHhcCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANLDS----LKQ---AFPNVQTVQVDLQDWARTRAAVSKVGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~----~~~---~~~~~~~~~~D~~~~~~v~~~~~~~g~   81 (238)
                      ++++.+| |+ |.+|.++|..|+..|  .++++++++++..+.    +..   ..+.......|.   +       .+..
T Consensus         5 ~~KI~II-Ga-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~-------~~~~   72 (146)
T d1ez4a1           5 HQKVVLV-GD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S-------DCKD   72 (146)
T ss_dssp             BCEEEEE-CC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G-------GGTT
T ss_pred             CCEEEEE-CC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H-------Hhcc
Confidence            4444444 75 899999999999987  489999999876442    221   122233333343   2       2234


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEc
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS  141 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~is  141 (238)
                      -|++|.++|.....   ..+.    ...++.|.    .+.+...+.+.+..+++.++.+|
T Consensus        73 adivvitag~~~~~---g~~r----~~l~~~N~----~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          73 ADLVVITAGAPQKP---GESR----LDLVNKNL----NILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             CSEEEECCCC-----------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ccEEEEecccccCC---CCCH----HHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeC
Confidence            69999999865421   1222    22234444    44456666666655456666555

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.37  E-value=0.00075  Score=46.96  Aligned_cols=112  Identities=14%  Similarity=0.125  Sum_probs=64.8

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHH----HHhhC---C-CceEEEeecCCHHHHHHHHHh
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDS----LKQAF---P-NVQTVQVDLQDWARTRAAVSK   78 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~----~~~~~---~-~~~~~~~D~~~~~~v~~~~~~   78 (238)
                      .++.+-+.|.|+ |.+|.++|..|+..|.  ++++++++++.++.    +.+..   . ...+...|.          +.
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~----------~~   71 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY----------DD   71 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG----------GG
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH----------HH
Confidence            334444556686 9999999999998874  79999999876432    22211   1 233333332          12


Q ss_pred             cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         79 VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      +..-|++|.++|......   ++..++    +..|    .-+.+...+.+.+..+.+.++.+|-
T Consensus        72 l~daDvvvitag~~~~~~---~~R~dl----~~~N----~~i~~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          72 CRDADLVVICAGANQKPG---ETRLDL----VDKN----IAIFRSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             TTTCSEEEECCSCCCCTT---TCSGGG----HHHH----HHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             hccceeEEEecccccccC---cchhHH----HHHH----HHHHHHHHHHHHhhCCCceEEEecC
Confidence            234699999999764221   222221    2333    3344555555555554666776653

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.37  E-value=0.00023  Score=50.51  Aligned_cols=79  Identities=14%  Similarity=0.090  Sum_probs=54.4

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      ..+...+++|.|+ |++|...+..+...|++|+++++++++++..++.... .+  .|.++++..+...+..++.+.+|.
T Consensus        24 ~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga~-~~--i~~~~~~~~~~~~~~~~g~~~~i~   99 (166)
T d1llua2          24 NARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGAS-LT--VNARQEDPVEAIQRDIGGAHGVLV   99 (166)
T ss_dssp             TCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCS-EE--EETTTSCHHHHHHHHHSSEEEEEE
T ss_pred             CCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCcc-cc--ccccchhHHHHHHHhhcCCccccc
Confidence            3445566777775 9999999998888999999999999998877665433 22  355554444444444445666666


Q ss_pred             ccC
Q psy14567         88 NAA   90 (238)
Q Consensus        88 ~ag   90 (238)
                      +++
T Consensus       100 ~~~  102 (166)
T d1llua2         100 TAV  102 (166)
T ss_dssp             CCS
T ss_pred             ccc
Confidence            554

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.37  E-value=0.00023  Score=51.01  Aligned_cols=81  Identities=14%  Similarity=0.091  Sum_probs=55.0

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVL   85 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~l   85 (238)
                      .+...+++|.|+ ||+|...+..+...|+ +|+++++++++.+...+......+...|-.  +.+.+..+..  +.+|++
T Consensus        26 vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~~~~--~~~~~~~~~~~~~G~D~v  102 (176)
T d2jhfa2          26 VTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYK--KPIQEVLTEMSNGGVDFS  102 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGGGCS--SCHHHHHHHHTTSCBSEE
T ss_pred             CCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecCCch--hHHHHHHHHHhcCCCCEE
Confidence            445567888888 7899999999999986 899999999998766655433222122222  2233333332  569999


Q ss_pred             EEccCCC
Q psy14567         86 INNAAVA   92 (238)
Q Consensus        86 i~~ag~~   92 (238)
                      |.+.|..
T Consensus       103 id~~G~~  109 (176)
T d2jhfa2         103 FEVIGRL  109 (176)
T ss_dssp             EECSCCH
T ss_pred             EecCCch
Confidence            9999854

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.32  E-value=0.0003  Score=50.60  Aligned_cols=82  Identities=10%  Similarity=-0.025  Sum_probs=56.4

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCC-HHHHHHHHHhcCCccEEE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQD-WARTRAAVSKVGPVDVLI   86 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~g~id~li   86 (238)
                      .+...+++|.|+ ||+|...+..+...|+ +|+++++++++++-.++......+-.-|-.+ .+.+.+... -+.+|++|
T Consensus        27 ~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~-g~G~d~vi  104 (176)
T d1d1ta2          27 VKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMT-GNNVGYTF  104 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHH-TSCCCEEE
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhc-cccceEEE
Confidence            445667888875 8999999999999995 8999999999998777766543222223222 222222222 24699999


Q ss_pred             EccCCC
Q psy14567         87 NNAAVA   92 (238)
Q Consensus        87 ~~ag~~   92 (238)
                      .+.|..
T Consensus       105 ~~~g~~  110 (176)
T d1d1ta2         105 EVIGHL  110 (176)
T ss_dssp             ECSCCH
T ss_pred             EeCCch
Confidence            998853

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.25  E-value=0.00036  Score=48.74  Aligned_cols=60  Identities=13%  Similarity=-0.046  Sum_probs=44.6

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCC
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQD   68 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~   68 (238)
                      ...++.++|.||.|.+|..+|+.|.+.|++|.+.+|+.....+.............++..
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~~   65 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILANADVVIVSVPINL   65 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHTTCSEEEECSCGGG
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhhhccccccccchhh
Confidence            345667777899999999999999999999999999887665554444444444444433

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.25  E-value=8e-05  Score=54.32  Aligned_cols=76  Identities=13%  Similarity=0.151  Sum_probs=47.8

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHH----HhhCCCceEEEee---cCCH-HHHHHHHHhc-CCccE
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSL----KQAFPNVQTVQVD---LQDW-ARTRAAVSKV-GPVDV   84 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~~~~~~D---~~~~-~~v~~~~~~~-g~id~   84 (238)
                      +++++||+||+|.+.++.....|++|+++.|+.+..++.    .+...+ ..+..|   ..+. +.+.+..+.. +++|+
T Consensus        32 vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad-~vi~~~~~~~~~~~~~v~~~~~~~g~~vdv  110 (189)
T d1gu7a2          32 WFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT-QVITEDQNNSREFGPTIKEWIKQSGGEAKL  110 (189)
T ss_dssp             EEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS-EEEEHHHHHCGGGHHHHHHHHHHHTCCEEE
T ss_pred             EEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc-EEEeccccchhHHHHHHHHHHhhccCCceE
Confidence            445589999999999998888999999998876654433    333322 233222   1111 2233333333 46999


Q ss_pred             EEEccC
Q psy14567         85 LINNAA   90 (238)
Q Consensus        85 li~~ag   90 (238)
                      ++.+.|
T Consensus       111 v~D~vg  116 (189)
T d1gu7a2         111 ALNCVG  116 (189)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            998876

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.22  E-value=0.00017  Score=49.28  Aligned_cols=70  Identities=10%  Similarity=0.075  Sum_probs=54.5

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHH-HHhcCCccEEEEccC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAA-VSKVGPVDVLINNAA   90 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~-~~~~g~id~li~~ag   90 (238)
                      ++|-|+ |-+|+++++.|.+.|..|++++.+++..+++....  ...+..|.++++.++++ ++   +.|.+|...+
T Consensus         3 ~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~--~~~~~gd~~~~~~l~~a~i~---~a~~vi~~~~   73 (134)
T d2hmva1           3 FAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYA--THAVIANATEENELLSLGIR---NFEYVIVAIG   73 (134)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTC--SEEEECCTTCTTHHHHHTGG---GCSEEEECCC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhC--CcceeeecccchhhhccCCc---cccEEEEEcC
Confidence            344455 78999999999999999999999999998887654  45678999998877665 33   4577766554

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.16  E-value=0.0004  Score=49.40  Aligned_cols=66  Identities=9%  Similarity=0.126  Sum_probs=47.6

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      +.++|-|+ ||.+++++..|.+.|+ +|.++.|+.++.+++.+..+.. .+  +-..          ..+.|++||+..+
T Consensus        18 ~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~-~~--~~~~----------~~~~DliINaTpi   83 (167)
T d1npya1          18 AKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YI--NSLE----------NQQADILVNVTSI   83 (167)
T ss_dssp             SCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EE--SCCT----------TCCCSEEEECSST
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhh-hh--hccc----------ccchhhheecccc
Confidence            34455454 8899999999999997 7999999999998887765432 11  1100          1257999999865


Q ss_pred             C
Q psy14567         92 A   92 (238)
Q Consensus        92 ~   92 (238)
                      .
T Consensus        84 G   84 (167)
T d1npya1          84 G   84 (167)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.15  E-value=0.00097  Score=46.69  Aligned_cols=119  Identities=13%  Similarity=0.110  Sum_probs=64.4

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhh-------CCCceEEEeecCCHHHHHHHHHh
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQA-------FPNVQTVQVDLQDWARTRAAVSK   78 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~   78 (238)
                      +..++.++.+| |+ |.+|..+|..++..+. ++++++.+++.++.....       .+.......+ ++.+   +.++ 
T Consensus         3 ~~~k~~KI~II-Ga-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-~~~~---~~~~-   75 (154)
T d1pzga1           3 LVQRRKKVAMI-GS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-YSYE---AALT-   75 (154)
T ss_dssp             CCSCCCEEEEE-CC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-CSHH---HHHT-
T ss_pred             cccCCCcEEEE-CC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc-Cchh---hhhc-
Confidence            34455555555 76 8999999998888885 899999887654432221       1111111111 2221   1222 


Q ss_pred             cCCccEEEEccCCCCCCCC--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         79 VGPVDVLINNAAVARFDRF--LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                        .-|++|.++|.......  .+++..+    .++.|..    +++...+.+.+..+.+.++.+|.
T Consensus        76 --~adiVvitag~~~~~g~~~~~~tR~~----l~~~n~~----iv~~i~~~i~~~~p~aiviivsN  131 (154)
T d1pzga1          76 --GADCVIVTAGLTKVPGKPDSEWSRND----LLPFNSK----IIREIGQNIKKYCPKTFIIVVTN  131 (154)
T ss_dssp             --TCSEEEECCSCSSCTTCCGGGCCGGG----GHHHHHH----HHHHHHHHHHHHCTTCEEEECCS
T ss_pred             --CCCeEEEecccccCCCCCCcccchhh----hhhhhHH----HHHHHHHHHHhcCCCcEEEEeCC
Confidence              46999999997643211  1123222    1233433    44555555555554566666653

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.10  E-value=0.00064  Score=48.26  Aligned_cols=75  Identities=12%  Similarity=-0.012  Sum_probs=52.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHh-cCCccEEEEcc
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSK-VGPVDVLINNA   89 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-~g~id~li~~a   89 (238)
                      ...+++|.|+ |++|...+..+...|++|+++++++++++..++...+. ++  |..++++   ..++ .+..|.++.+.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa~~-~i--~~~~~~~---~~~~~~~~~d~vi~~~   99 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGADH-YI--ATLEEGD---WGEKYFDTFDLIVVCA   99 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTCSE-EE--EGGGTSC---HHHHSCSCEEEEEECC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCCcE-Ee--eccchHH---HHHhhhcccceEEEEe
Confidence            3456677776 89999999888889999999999999998887765442 22  3322221   2222 25689999988


Q ss_pred             CCC
Q psy14567         90 AVA   92 (238)
Q Consensus        90 g~~   92 (238)
                      |..
T Consensus       100 ~~~  102 (168)
T d1piwa2         100 SSL  102 (168)
T ss_dssp             SCS
T ss_pred             cCC
Confidence            754

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.05  E-value=0.00062  Score=48.32  Aligned_cols=76  Identities=14%  Similarity=0.165  Sum_probs=54.9

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +...+++|.|+ |++|...+..+...|++++++++++++.+.+++...+.   ..|..+++...   +..+++|++|.+.
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGad~---~i~~~~~~~~~---~~~~~~D~vid~~  101 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGADE---VVNSRNADEMA---AHLKSFDFILNTV  101 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTCSE---EEETTCHHHHH---TTTTCEEEEEECC
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCCcE---EEECchhhHHH---HhcCCCceeeeee
Confidence            34456777775 89999999888889999999999999887666554332   24666655432   2235799999999


Q ss_pred             CCC
Q psy14567         90 AVA   92 (238)
Q Consensus        90 g~~   92 (238)
                      |..
T Consensus       102 g~~  104 (168)
T d1uufa2         102 AAP  104 (168)
T ss_dssp             SSC
T ss_pred             ecc
Confidence            853

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.03  E-value=0.00049  Score=50.25  Aligned_cols=78  Identities=13%  Similarity=-0.016  Sum_probs=51.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEE
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLIN   87 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~   87 (238)
                      ...+++|.|+ |++|...+..+...|+ +|+++++++++++...+.....   ..|-.+.+..++..+..  ...|++|.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~---~~~~~~~~~~~~i~~~t~g~g~D~vid  100 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEI---ADLSLDTPLHEQIAALLGEPEVDCAVD  100 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEE---EETTSSSCHHHHHHHHHSSSCEEEEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccE---EEeCCCcCHHHHHHHHhCCCCcEEEEE
Confidence            3446777875 8999888888877787 8999999999887776654322   22333322222222222  35999999


Q ss_pred             ccCCC
Q psy14567         88 NAAVA   92 (238)
Q Consensus        88 ~ag~~   92 (238)
                      +.|.-
T Consensus       101 ~vG~~  105 (195)
T d1kola2         101 AVGFE  105 (195)
T ss_dssp             CCCTT
T ss_pred             Ccccc
Confidence            99854

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.97  E-value=0.0009  Score=46.63  Aligned_cols=112  Identities=11%  Similarity=0.100  Sum_probs=62.9

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhC--------CCceEEEeecCCHHHHHHHHHhcCCc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAF--------PNVQTVQVDLQDWARTRAAVSKVGPV   82 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~g~i   82 (238)
                      .|+.+| |+ |++|.+++..+...+. ++++++++++..+......        .+......+  +.       +.+..-
T Consensus         4 ~KI~II-Ga-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~-------~~~~~a   72 (150)
T d1t2da1           4 AKIVLV-GS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY-------DDLAGA   72 (150)
T ss_dssp             CEEEEE-CC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG-------GGGTTC
T ss_pred             CeEEEE-CC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc-------cccCCC
Confidence            444444 74 8999999988888775 8999999886644332111        122222221  11       122346


Q ss_pred             cEEEEccCCCCCCCCC--CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         83 DVLINNAAVARFDRFL--DIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        83 d~li~~ag~~~~~~~~--~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      |++|.++|........  +.+..+    .++.|.    -+.+.+.+.+.+..+.+.++.+|.
T Consensus        73 dvvvitag~~~~~g~~~~~~~R~~----l~~~N~----~iv~~i~~~i~~~~p~aivivvtN  126 (150)
T d1t2da1          73 DVVIVTAGFTKAPGKSDKEWNRDD----LLPLNN----KIMIEIGGHIKKNCPNAFIIVVTN  126 (150)
T ss_dssp             SEEEECCSCSSCTTCCSTTCCGGG----GHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             cEEEEecccccCCCCCccccchhH----HHHHHH----HHHHHHHHHHHhcCCCeEEEEecC
Confidence            9999999976432211  122222    234443    455666666666554566666653

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.94  E-value=0.00093  Score=47.75  Aligned_cols=79  Identities=14%  Similarity=0.103  Sum_probs=53.8

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHH-HHHHHHHhc--CCccE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWA-RTRAAVSKV--GPVDV   84 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~--g~id~   84 (238)
                      .+...+++|.|+ ||+|...+..+...|+ +|+++++++++++..++.... .++  |.++.+ .+.+..+..  +..|+
T Consensus        25 ~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~-~~i--~~~~~d~~~~~~~~~~~~~G~d~  100 (174)
T d1p0fa2          25 VTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT-ECL--NPKDYDKPIYEVICEKTNGGVDY  100 (174)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCS-EEE--CGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCc-EEE--cCCCchhHHHHHHHHhcCCCCcE
Confidence            344557788885 8999999999999997 799999999998777655432 233  333222 122232222  46999


Q ss_pred             EEEccCC
Q psy14567         85 LINNAAV   91 (238)
Q Consensus        85 li~~ag~   91 (238)
                      +|.++|.
T Consensus       101 vid~~g~  107 (174)
T d1p0fa2         101 AVECAGR  107 (174)
T ss_dssp             EEECSCC
T ss_pred             EEEcCCC
Confidence            9999875

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.89  E-value=0.0011  Score=47.22  Aligned_cols=79  Identities=14%  Similarity=0.097  Sum_probs=52.7

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCC-HHHHHHHHHhc--CCccE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQD-WARTRAAVSKV--GPVDV   84 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~--g~id~   84 (238)
                      .+...+++|.|+ ||+|...+..+...|+ +|+++++++++.+..++.... .++  |..+ .+.+.+.++..  +.+|+
T Consensus        26 ~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~-~~i--~~~~~~~~~~~~~~~~~~~g~D~  101 (176)
T d2fzwa2          26 LEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT-ECI--NPQDFSKPIQEVLIEMTDGGVDY  101 (176)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCS-EEE--CGGGCSSCHHHHHHHHTTSCBSE
T ss_pred             CCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCc-EEE--eCCchhhHHHHHHHHHcCCCCcE
Confidence            344557788887 6899999999999996 678888888887666654433 233  2221 22334444333  46999


Q ss_pred             EEEccCC
Q psy14567         85 LINNAAV   91 (238)
Q Consensus        85 li~~ag~   91 (238)
                      +|.+.|.
T Consensus       102 vid~~G~  108 (176)
T d2fzwa2         102 SFECIGN  108 (176)
T ss_dssp             EEECSCC
T ss_pred             eeecCCC
Confidence            9999874

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.002  Score=45.68  Aligned_cols=70  Identities=13%  Similarity=0.152  Sum_probs=49.8

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCce-EEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQ-TVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      .++|-| +||-+++++..|.+.|.+|.++.|+.++.+++.+.+.+.. ....+..+.        ...+.|++||+....
T Consensus        20 ~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~--------~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          20 RILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL--------EGHEFDLIINATSSG   90 (170)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG--------TTCCCSEEEECCSCG
T ss_pred             EEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccc--------cccccceeecccccC
Confidence            344545 3789999999999999999999999999999888775422 122222211        123589999998654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.87  E-value=0.0015  Score=46.03  Aligned_cols=78  Identities=15%  Similarity=0.086  Sum_probs=51.1

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      .+...+++|.| +|++|...+..+...|++|+++++++++++.+++...+.   ..|.++.+....+.+.....|.+|.+
T Consensus        25 ~~~g~~vlv~G-~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga~~---~~~~~~~~~~~~~~~~~~~~~~~v~~  100 (168)
T d1rjwa2          25 AKPGEWVAIYG-IGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADL---VVNPLKEDAAKFMKEKVGGVHAAVVT  100 (168)
T ss_dssp             CCTTCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSE---EECTTTSCHHHHHHHHHSSEEEEEES
T ss_pred             CCCCCEEEEee-cccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCcce---ecccccchhhhhcccccCCCceEEee
Confidence            34455667766 489999999999899999999999999998887654332   23333333222232222345666666


Q ss_pred             cC
Q psy14567         89 AA   90 (238)
Q Consensus        89 ag   90 (238)
                      ++
T Consensus       101 ~~  102 (168)
T d1rjwa2         101 AV  102 (168)
T ss_dssp             SC
T ss_pred             cC
Confidence            65

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.78  E-value=0.0022  Score=44.29  Aligned_cols=32  Identities=6%  Similarity=-0.004  Sum_probs=27.7

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC--EEEEecCCh
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQ   46 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~   46 (238)
                      +.|.||+|.+|.++|..|+..|.  +++++++++
T Consensus         3 V~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~   36 (145)
T d1hyea1           3 VTIIGASGRVGSATALLLAKEPFMKDLVLIGREH   36 (145)
T ss_dssp             EEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG
T ss_pred             EEEECCCChHHHHHHHHHHhCCcccccccccchh
Confidence            35679999999999999999984  899999875

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.77  E-value=0.0015  Score=46.42  Aligned_cols=76  Identities=16%  Similarity=0.137  Sum_probs=52.6

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEc
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINN   88 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~   88 (238)
                      ..+++|.|+ |++|...+..+...|+ +|+++++++++++.+++.... .++  |.++ +..+...+..  ..+|++|.+
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~-~~i--~~~~-~~~~~~~~~~~~~g~d~vid~  107 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGAD-HVV--DARR-DPVKQVMELTRGRGVNVAMDF  107 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCS-EEE--ETTS-CHHHHHHHHTTTCCEEEEEES
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccc-eee--cCcc-cHHHHHHHhhCCCCceEEEEe
Confidence            456677665 9999999998888886 778889999888777765433 233  3332 3344454443  359999999


Q ss_pred             cCCC
Q psy14567         89 AAVA   92 (238)
Q Consensus        89 ag~~   92 (238)
                      +|..
T Consensus       108 ~g~~  111 (172)
T d1h2ba2         108 VGSQ  111 (172)
T ss_dssp             SCCH
T ss_pred             cCcc
Confidence            9853

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.76  E-value=0.0041  Score=43.28  Aligned_cols=110  Identities=12%  Similarity=0.156  Sum_probs=59.2

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC---------EEEEecCChHhHHHHHhhC-----CCceEEEeecCCHHHHHHHHHhc
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA---------IIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVSKV   79 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~---------~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~   79 (238)
                      -+.|+||+|.+|.+++..|+..+.         +++...++.+..+......     .....+...-.+.+    .+   
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---   78 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKV----AF---   78 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH----HT---
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhh----hc---
Confidence            456689999999999999987642         2333445555554432221     11222322222222    22   


Q ss_pred             CCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CceEEEEc
Q psy14567         80 GPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI-QGSIVNVS  141 (238)
Q Consensus        80 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~g~iv~is  141 (238)
                      ..-|++|.++|....   ..++..+    .++.|.    .+++.+.+.+.+..+ .+.++.+|
T Consensus        79 ~~advViitaG~~~~---pg~~r~d----l~~~N~----~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          79 KDADYALLVGAAPRK---AGMERRD----LLQVNG----KIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             TTCSEEEECCCCCCC---TTCCHHH----HHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ccccEEEeecCcCCC---CCCcHHH----HHHHHH----HHHHHHHHHHHHhCCCCcEEEEec
Confidence            247999999998642   2334433    233444    444555555555321 34555554

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.75  E-value=0.0021  Score=45.87  Aligned_cols=79  Identities=15%  Similarity=0.069  Sum_probs=51.8

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLI   86 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li   86 (238)
                      +...+++|.|+ ||||...+..+...|+ +|+++++++++++-.++.. -...+...-.+ +......+..  +.+|++|
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~G-a~~~i~~~~~~-~~~~~~~~~~~~~G~d~vi  103 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG-ATDCLNPRELD-KPVQDVITELTAGGVDYSL  103 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT-CSEEECGGGCS-SCHHHHHHHHHTSCBSEEE
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhC-CCcccCCccch-hhhhhhHhhhhcCCCcEEE
Confidence            34456777764 9999999999999998 7888999998876555543 33333221111 1222222222  4699999


Q ss_pred             EccCC
Q psy14567         87 NNAAV   91 (238)
Q Consensus        87 ~~ag~   91 (238)
                      .++|.
T Consensus       104 e~~G~  108 (174)
T d1e3ia2         104 DCAGT  108 (174)
T ss_dssp             ESSCC
T ss_pred             Eeccc
Confidence            99984

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.73  E-value=0.0061  Score=42.69  Aligned_cols=110  Identities=13%  Similarity=0.149  Sum_probs=64.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHH----HHh---hCCCceEEEeecCCHHHHHHHHHhcCC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDS----LKQ---AFPNVQTVQVDLQDWARTRAAVSKVGP   81 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~----~~~---~~~~~~~~~~D~~~~~~v~~~~~~~g~   81 (238)
                      +.++.+| |+ |.+|.++|..|+..|.  ++++++++++..+.    +.+   ..+.......  .+.++       +..
T Consensus        20 ~~KV~II-Ga-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~--~d~~~-------~~~   88 (160)
T d1i0za1          20 NNKITVV-GV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD--KDYSV-------TAN   88 (160)
T ss_dssp             SSEEEEE-CC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC--SSGGG-------GTT
T ss_pred             CCeEEEE-CC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec--cchhh-------ccc
Confidence            3344444 75 8999999999999986  89999999876432    222   1111211111  22222       234


Q ss_pred             ccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         82 VDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      =|++|..||.....   .++..++    ++.|    ..+++...+.+.+..+++-++.+|.
T Consensus        89 adiVVitAg~~~~~---g~tR~~l----~~~N----~~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          89 SKIVVVTAGVRQQE---GESRLNL----VQRN----VNVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             CSEEEECCSCCCCT---TCCGGGG----HHHH----HHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             ccEEEEecCCcccc---CcchHHH----HHHH----HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence            69999999975422   2233221    2333    3456677777777664667776653

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.70  E-value=0.0069  Score=41.68  Aligned_cols=109  Identities=16%  Similarity=0.145  Sum_probs=59.3

Q ss_pred             CCCCCCCchHHHHHHHHhh-CC--CEEEEecCChHhHH---HHHhhCCCceEE-EeecCCHHHHHHHHHhcCCccEEEEc
Q psy14567         16 GGDYPKPGIGRCIVEKLSQ-HE--AIIIALSKTQANLD---SLKQAFPNVQTV-QVDLQDWARTRAAVSKVGPVDVLINN   88 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~-~G--~~V~~~~r~~~~~~---~~~~~~~~~~~~-~~D~~~~~~v~~~~~~~g~id~li~~   88 (238)
                      .|.|++|.+|.++|..|+. .+  .++++.+..+....   ++.......... ...-.+.++    ++   .-|++|.+
T Consensus         4 ~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~----~~---~aDvvvit   76 (145)
T d2cmda1           4 AVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPA----LE---GADVVLIS   76 (145)
T ss_dssp             EEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHH----HT---TCSEEEEC
T ss_pred             EEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCccc----cC---CCCEEEEC
Confidence            4679999999999998864 34  58999987653211   222211111111 112222322    22   35999999


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         89 AAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        89 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      +|.....   .++..+    .++.|..    +.+...+.+.+..+++.++.+|.
T Consensus        77 aG~~~k~---g~~R~d----l~~~N~~----i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          77 AGVRRKP---GMDRSD----LFNVNAG----IVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             CSCCCCT---TCCGGG----GHHHHHH----HHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCccCCC---Ccchhh----HHHHHHH----HHHHHHHHHHhhCCCcEEEEccC
Confidence            9976422   223333    2345544    34555555555544566776654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.65  E-value=0.0066  Score=42.44  Aligned_cols=107  Identities=12%  Similarity=0.121  Sum_probs=62.8

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHH----HHHhh---CCCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLD----SLKQA---FPNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~----~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      +.|.|+ |.+|.++|..|+..|.  ++++++++++.++    ++.+.   .+....+..  .+.+       ....-|++
T Consensus        22 I~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~--~d~~-------~~~~adiv   91 (159)
T d2ldxa1          22 ITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFG--KDYN-------VSANSKLV   91 (159)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEE--SSGG-------GGTTEEEE
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEec--cchh-------hhccccEE
Confidence            455585 9999999999998875  7999999986543    33321   122222222  1221       22356999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      |..||......   ++..++    ++.|    ..+.+...+.+.+..+.+.++.+|.
T Consensus        92 vitag~~~~~~---~~R~dl----l~~N----~~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          92 IITAGARMVSG---QTRLDL----LQRN----VAIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             EECCSCCCCTT---TCSSCT----THHH----HHHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             EEecccccCCC---CCHHHH----HHHH----HHHHHHHHHHHhccCCCeEEEEeCC
Confidence            99999754322   222221    2233    3345666666666665677777654

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.63  E-value=0.0027  Score=45.01  Aligned_cols=79  Identities=19%  Similarity=0.114  Sum_probs=51.3

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHH-HHHHHHhc--CCccE
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWAR-TRAAVSKV--GPVDV   84 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~-v~~~~~~~--g~id~   84 (238)
                      .+...+++|.|+ ||+|...+..++..|. +|+++++++++++...+.... +++  |.++++. +++..+..  +.+|+
T Consensus        26 ~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd-~~i--n~~~~~~~~~~~~~~~~~~G~d~  101 (175)
T d1cdoa2          26 VEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT-DFV--NPNDHSEPISQVLSKMTNGGVDF  101 (175)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCC-EEE--CGGGCSSCHHHHHHHHHTSCBSE
T ss_pred             CCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCc-EEE--cCCCcchhHHHHHHhhccCCcce
Confidence            344456777765 7788888888888776 799999999998777665432 233  3322221 22222222  46999


Q ss_pred             EEEccCC
Q psy14567         85 LINNAAV   91 (238)
Q Consensus        85 li~~ag~   91 (238)
                      ++.+.|.
T Consensus       102 vid~~G~  108 (175)
T d1cdoa2         102 SLECVGN  108 (175)
T ss_dssp             EEECSCC
T ss_pred             eeeecCC
Confidence            9999985

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.60  E-value=0.0017  Score=44.74  Aligned_cols=103  Identities=15%  Similarity=0.140  Sum_probs=58.4

Q ss_pred             CCCCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhC-------C-CceEEE-eecCCHHHHHHHHHhcCCccEEE
Q psy14567         17 GDYPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAF-------P-NVQTVQ-VDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        17 itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~-------~-~~~~~~-~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      |.|+ |.+|.++|..|+..+. ++++++.+++..+......       + ...+.. -|..          .+..-|++|
T Consensus         6 IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~----------~~~~advvv   74 (142)
T d1uxja1           6 IIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYA----------DTANSDVIV   74 (142)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGG----------GGTTCSEEE
T ss_pred             EECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHH----------HhcCCCEEE
Confidence            3475 8999999999988775 8999998876544322111       1 122221 1221          112469999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEc
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS  141 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~is  141 (238)
                      .+||.....   .++..    ..++.|.    .+++...+.+.+..+++.++.+|
T Consensus        75 itag~~~~~---~~~r~----dl~~~N~----~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          75 VTSGAPRKP---GMSRE----DLIKVNA----DITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             ECCSCC----------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred             EeeeccCCc---Ccchh----HHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence            999976421   12221    2233443    46677777777766466666554

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.53  E-value=0.0034  Score=43.10  Aligned_cols=105  Identities=16%  Similarity=0.206  Sum_probs=60.1

Q ss_pred             CCCCCCCchHHHHHHHHhhCC--CEEEEecCChHhHHHHHhhC--------CCceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANLDSLKQAF--------PNVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      .|.|+ |.+|.+++..|+..|  .++++++++++.++......        ....+...  .+.++       +..-|++
T Consensus         4 ~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-------~~dadvv   73 (142)
T d1guza1           4 TVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-------TANSDIV   73 (142)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-------GTTCSEE
T ss_pred             EEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-------hcCCeEE
Confidence            34585 899999999999987  48999999886644322111        12323222  22221       2346999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEc
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS  141 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~is  141 (238)
                      |.++|.....   .++..+    .++.|..    +++...+.+.+..+++-++++|
T Consensus        74 vitag~~~~~---g~~r~~----l~~~N~~----i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          74 IITAGLPRKP---GMTRED----LLMKNAG----IVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             EECCSCCCCT---TCCHHH----HHHHHHH----HHHHHHHHHHHHCSSCEEEECC
T ss_pred             EEEEecCCCC---CCchHH----HHHHHHH----HHHHHHHHhhccCCCeEEEEec
Confidence            9999975421   222222    2334433    4455555555554456666554

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.45  E-value=0.013  Score=40.06  Aligned_cols=106  Identities=10%  Similarity=0.046  Sum_probs=63.4

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC--EEEEecCC--hHhHH----HHHh---hCCCceEEEeecCCHHHHHHHHHhcCCcc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA--IIIALSKT--QANLD----SLKQ---AFPNVQTVQVDLQDWARTRAAVSKVGPVD   83 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~--~~~~~----~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~g~id   83 (238)
                      +.|.||+|.+|.++|..+...|.  ++++++.+  ++..+    ++.+   ..........|.   ++       +..-|
T Consensus         3 V~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-------~~~aD   72 (142)
T d1o6za1           3 VSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-------TAGSD   72 (142)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-------GTTCS
T ss_pred             EEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-------hhhcC
Confidence            35679999999999999999875  78888854  32222    2332   112233333332   21       23469


Q ss_pred             EEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEc
Q psy14567         84 VLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS  141 (238)
Q Consensus        84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~is  141 (238)
                      ++|.+||....   ..++..+    .++.|.    -+.+...+.+.+..+++.++.+|
T Consensus        73 iVvitaG~~~~---~g~~R~d----l~~~N~----~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          73 VVVITAGIPRQ---PGQTRID----LAGDNA----PIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             EEEECCCCCCC---TTCCHHH----HHHHHH----HHHHHHHHHHHTTCSCCEEEECC
T ss_pred             EEEEecccccc---cCCchhh----HHHHHH----HHHHHHHHHHHhcCCCceEEEec
Confidence            99999996532   1233332    334444    45566777777766566666664

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.40  E-value=0.0074  Score=41.24  Aligned_cols=103  Identities=11%  Similarity=0.057  Sum_probs=61.3

Q ss_pred             CCCCCCchHHHHHHHHhhCC--CEEEEecCChHhHHHHHhh-------CCCceEEEeecCCHHHHHHHHHhcCCccEEEE
Q psy14567         17 GDYPKPGIGRCIVEKLSQHE--AIIIALSKTQANLDSLKQA-------FPNVQTVQVDLQDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        17 itG~s~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~   87 (238)
                      |.|+ |++|.+++..++..+  .++++++++++.++.....       .+.......|.   +       .+..-|++|.
T Consensus         5 IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~---~-------~~~~adivvi   73 (140)
T d1a5za1           5 IVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDY---A-------DLKGSDVVIV   73 (140)
T ss_dssp             EECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCG---G-------GGTTCSEEEE
T ss_pred             EECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcH---H-------HhcCCCEEEE
Confidence            3475 899999999998877  4899999998765432211       12233322222   1       1234699999


Q ss_pred             ccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEc
Q psy14567         88 NAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS  141 (238)
Q Consensus        88 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~is  141 (238)
                      ++|.....   .++..+    .+..|    ..+++...+.+.+..+.+.++.+|
T Consensus        74 tag~~~~~---g~~r~d----l~~~N----~~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          74 AAGVPQKP---GETRLQ----LLGRN----ARVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             CCCCCCCS---SCCHHH----HHHHH----HHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             ecccccCC---Ccchhh----hhccc----cchHHHHHHHHHhcCCCcEEEEeC
Confidence            99975432   233322    23334    345666677777665466666655

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.39  E-value=0.0031  Score=44.79  Aligned_cols=71  Identities=15%  Similarity=0.131  Sum_probs=48.7

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCC-ceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN-VQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      .++|- |+||.+++++..|.+.+.+|.++.|+.++++++.+.+.. ......+..+        ......|++||+....
T Consensus        20 ~vlIl-GaGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~--------~~~~~~diiIN~tp~g   90 (171)
T d1p77a1          20 HVLIL-GAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS--------IPLQTYDLVINATSAG   90 (171)
T ss_dssp             EEEEE-CCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG--------CCCSCCSEEEECCCC-
T ss_pred             EEEEE-CCcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc--------ccccccceeeeccccc
Confidence            44553 458899999999998888999999999998888776542 1222222211        1234689999999766


Q ss_pred             C
Q psy14567         93 R   93 (238)
Q Consensus        93 ~   93 (238)
                      .
T Consensus        91 ~   91 (171)
T d1p77a1          91 L   91 (171)
T ss_dssp             -
T ss_pred             c
Confidence            4

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.32  E-value=0.015  Score=41.19  Aligned_cols=113  Identities=14%  Similarity=0.037  Sum_probs=60.4

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhC---CC----EEEEecCCh--HhHHHHHhh---CCCceEEEeec-CCHHHHHHHHHh
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQH---EA----IIIALSKTQ--ANLDSLKQA---FPNVQTVQVDL-QDWARTRAAVSK   78 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~---G~----~V~~~~r~~--~~~~~~~~~---~~~~~~~~~D~-~~~~~v~~~~~~   78 (238)
                      ...+.||||+|+||.+++..|+..   |.    .+.+.+..+  +.++.+..+   +........-. ++.   .   +.
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~~~---~---~~   97 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGIDP---Y---EV   97 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCH---H---HH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccccc---h---hh
Confidence            335788999999999999999864   32    455555544  334433322   21111111122 221   1   22


Q ss_pred             cCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CceEEEEc
Q psy14567         79 VGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKI-QGSIVNVS  141 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~g~iv~is  141 (238)
                      +..-|++|..+|....   ..++..+    .++.|.    .+.+...+.+.+..+ ..+|+.+|
T Consensus        98 ~~~aDvVvi~ag~~rk---pg~tR~D----ll~~N~----~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          98 FEDVDWALLIGAKPRG---PGMERAA----LLDING----QIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             TTTCSEEEECCCCCCC---TTCCHHH----HHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ccCCceEEEeeccCCC---CCCcHHH----HHHHHH----HHHHHHHHHHHhhCCCCcEEEEec
Confidence            2357999999987532   2344444    344453    344555555555321 34555554

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=96.25  E-value=0.0044  Score=45.97  Aligned_cols=68  Identities=25%  Similarity=0.272  Sum_probs=46.4

Q ss_pred             CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHH-HhcCCccEEEEccCCCCC
Q psy14567         20 PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAV-SKVGPVDVLINNAAVARF   94 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~-~~~g~id~li~~ag~~~~   94 (238)
                      .||.+|.++|+++..+|++|.++.-..+.     ..-+++..  ..+...++..+.+ +.+...|++|++|.+..+
T Consensus        30 SSGk~G~aiA~~~~~~Ga~V~li~g~~~~-----~~p~~~~~--~~~~t~~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          30 SSGKMGFAIAAAAARRGANVTLVSGPVSL-----PTPPFVKR--VDVMTALEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEEECSCCC-----CCCTTEEE--EECCSHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             CcHHHHHHHHHHHHHcCCchhhhhccccc-----Cccccccc--ceehhhHHHHHHHHhhhccceeEeeeechhhh
Confidence            68899999999999999999877554321     00113333  3445555554444 555678999999988755

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.20  E-value=0.0023  Score=40.49  Aligned_cols=73  Identities=15%  Similarity=0.117  Sum_probs=47.6

Q ss_pred             eeeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh--HHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCc
Q psy14567          5 AKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN--LDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPV   82 (238)
Q Consensus         5 ~~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~i   82 (238)
                      +.+++++..++++    |.-|.++|+.|.+.|++|.+.+.+...  .+++.   ....+..... +++    .++   .+
T Consensus         1 ~~~~~K~v~ViGl----G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~---~~~~~~~~~~-~~~----~~~---~~   65 (93)
T d2jfga1           1 ADYQGKNVVIIGL----GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP---EAVERHTGSL-NDE----WLM---AA   65 (93)
T ss_dssp             CCCTTCCEEEECC----SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSC---TTSCEEESBC-CHH----HHH---HC
T ss_pred             CCcCCCEEEEEeE----CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHh---hccceeeccc-chh----hhc---cC
Confidence            3577777777665    567999999999999999999876542  21221   2333333332 222    223   36


Q ss_pred             cEEEEccCCC
Q psy14567         83 DVLINNAAVA   92 (238)
Q Consensus        83 d~li~~ag~~   92 (238)
                      |.+|.+.|+.
T Consensus        66 d~vi~SPGi~   75 (93)
T d2jfga1          66 DLIVASPGIA   75 (93)
T ss_dssp             SEEEECTTSC
T ss_pred             CEEEECCCCC
Confidence            9999999985

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.18  E-value=0.0042  Score=42.64  Aligned_cols=104  Identities=15%  Similarity=0.167  Sum_probs=55.8

Q ss_pred             CCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHH----HHHhhCC---CceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLD----SLKQAFP---NVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~----~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      .|.|+ |.+|.+++..++..|.  ++++++++++.++    ++.+..+   .......   +       .+.+..-|++|
T Consensus         5 ~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~-------~~~~~~adivv   73 (142)
T d1y6ja1           5 AIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---D-------YSDVKDCDVIV   73 (142)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C-------GGGGTTCSEEE
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---c-------HHHhCCCceEE
Confidence            34476 9999999999998875  8999998886532    2322111   1111111   1       12233569999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEc
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS  141 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~is  141 (238)
                      .+||.....   ..+..    ..++.|.    .+++...+.+.+..+++.++.+|
T Consensus        74 itag~~~~~---~~~r~----~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          74 VTAGANRKP---GETRL----DLAKKNV----MIAKEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             ECCCC---------CHH----HHHHHHH----HHHHHHHHHHHHHCCSCEEEECS
T ss_pred             EecccccCc---Ccchh----HHhhHHH----HHHHHHHHHhhccCCCceEEEec
Confidence            999965321   22222    2244454    44455556666655456666665

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.17  E-value=0.014  Score=41.31  Aligned_cols=34  Identities=15%  Similarity=0.389  Sum_probs=31.4

Q ss_pred             CchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh
Q psy14567         22 PGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA   55 (238)
Q Consensus        22 ~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (238)
                      |-+|.++|+.|++.|++|++.+|++++.+++.+.
T Consensus        11 G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~   44 (176)
T d2pgda2          11 AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN   44 (176)
T ss_dssp             SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHh
Confidence            7899999999999999999999999998888665

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.11  E-value=0.011  Score=41.25  Aligned_cols=36  Identities=8%  Similarity=0.082  Sum_probs=32.7

Q ss_pred             CCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC
Q psy14567         21 KPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF   56 (238)
Q Consensus        21 s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (238)
                      .|-+|.++|+.|++.|++|++.+|++++.+++.+..
T Consensus         8 lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~   43 (161)
T d1vpda2           8 LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAG   43 (161)
T ss_dssp             CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT
T ss_pred             hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhh
Confidence            478999999999999999999999999998887654

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.09  E-value=0.011  Score=40.43  Aligned_cols=105  Identities=10%  Similarity=0.120  Sum_probs=60.9

Q ss_pred             CCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHH----HHh---hCCCceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDS----LKQ---AFPNVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~----~~~---~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      .|.|+ |.+|.++|..++..|.  ++++++++++.++.    +.+   ..+.......  .+.++       +..-|++|
T Consensus         5 ~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~-------~~daDvVV   74 (143)
T d1llda1           5 AVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI-------CRDADMVV   74 (143)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG-------GTTCSEEE
T ss_pred             EEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHH-------hhCCcEEE
Confidence            34576 9999999999998885  89999999876442    222   1222322211  11111       12359999


Q ss_pred             EccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEc
Q psy14567         87 NNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS  141 (238)
Q Consensus        87 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~is  141 (238)
                      .+||....   ..++..+    .++.|.    .+.+...+.+.+..+++.++.+|
T Consensus        75 itaG~~~~---~g~~R~d----l~~~N~----~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          75 ITAGPRQK---PGQSRLE----LVGATV----NILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             ECCCCCCC---TTCCHHH----HHHHHH----HHHHHHHHHHHHHCTTSEEEECC
T ss_pred             EecccccC---CCCchhh----hhhhhH----HHHHHHHHHHHhhCCCeEEEEeC
Confidence            99997532   1233322    244454    34455555555555456666655

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.03  E-value=0.012  Score=41.14  Aligned_cols=37  Identities=16%  Similarity=0.198  Sum_probs=32.0

Q ss_pred             CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC
Q psy14567         20 PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF   56 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (238)
                      |.|-+|.++|+.|.+.|++|+..+|+++..++..+..
T Consensus         7 G~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~   43 (165)
T d2f1ka2           7 GLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQ   43 (165)
T ss_dssp             CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT
T ss_pred             eecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhh
Confidence            3489999999999999999999999998888766543

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.94  E-value=0.035  Score=38.54  Aligned_cols=58  Identities=14%  Similarity=0.065  Sum_probs=43.5

Q ss_pred             CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC-----------CceEEEeecCCHHHHHHHHH
Q psy14567         20 PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP-----------NVQTVQVDLQDWARTRAAVS   77 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----------~~~~~~~D~~~~~~v~~~~~   77 (238)
                      |.|-+|.++|+.|+++|+.|.+.+|+.++.+.+.+...           ....+..-+.+.+.++.++.
T Consensus         8 GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~   76 (162)
T d3cuma2           8 GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYL   76 (162)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHH
T ss_pred             EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHh
Confidence            34789999999999999999999999998877765542           24455555566666666654

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.92  E-value=0.0042  Score=42.63  Aligned_cols=104  Identities=13%  Similarity=0.106  Sum_probs=60.4

Q ss_pred             CCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHH----HHh---hCCC-ceEEEe-ecCCHHHHHHHHHhcCCccEE
Q psy14567         17 GDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDS----LKQ---AFPN-VQTVQV-DLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        17 itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~----~~~---~~~~-~~~~~~-D~~~~~~v~~~~~~~g~id~l   85 (238)
                      |.|+ |.+|.++|..++.+|.  ++++++++++..+.    +.+   ..+. ...... |.   +       .+..-|++
T Consensus         5 IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~-------~~~~adiV   73 (142)
T d1ojua1           5 FVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADY---S-------LLKGSEII   73 (142)
T ss_dssp             EECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCG---G-------GGTTCSEE
T ss_pred             EECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCH---H-------HhccccEE
Confidence            4475 9999999999998874  79999999876443    221   1222 222221 22   2       22246999


Q ss_pred             EEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEcc
Q psy14567         86 INNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSS  142 (238)
Q Consensus        86 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS  142 (238)
                      |..+|.....   .++..+    .+..|    ..+.+...+.+.+..+.+.++.+|.
T Consensus        74 vitag~~~~~---g~~r~~----l~~~n----~~i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          74 VVTAGLARKP---GMTRLD----LAHKN----AGIIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             EECCCCCCCS---SCCHHH----HHHHH----HHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             EEeccccCCC---CCchHH----HHHHh----hHHHHHHHHHHHhhCCCcEEEEecC
Confidence            9999965321   223322    23333    3445666666666554566666553

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.88  E-value=0.0075  Score=41.68  Aligned_cols=72  Identities=10%  Similarity=-0.056  Sum_probs=51.7

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh--hCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ--AFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      ++|.|. |.+|..+++.|.+.|..|+++..+++.......  ...++.++..|.++++.++++-  +.+.|.+|...
T Consensus         6 iII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~--i~~a~~vi~~~   79 (153)
T d1id1a_           6 FIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAG--IDRCRAILALS   79 (153)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHT--TTTCSEEEECS
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhc--cccCCEEEEcc
Confidence            445455 689999999999999999999888765433322  2246889999999998765551  12467777665

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.84  E-value=0.033  Score=38.44  Aligned_cols=111  Identities=17%  Similarity=0.141  Sum_probs=57.1

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCC-------EEEEecCCh--HhHHHHHh---hCCCceEEEeecCCHHHHHHHHHhcCCc
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEA-------IIIALSKTQ--ANLDSLKQ---AFPNVQTVQVDLQDWARTRAAVSKVGPV   82 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~g~i   82 (238)
                      +.|+||+|.+|.+++..|+..+.       .+++.+.++  +.++.+..   ............++..  .+.+   ..-
T Consensus         6 V~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~   80 (154)
T d5mdha1           6 VLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKE--EIAF---KDL   80 (154)
T ss_dssp             EEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCH--HHHT---TTC
T ss_pred             EEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCccc--cccc---CCc
Confidence            45679999999999999986432       456665544  33333322   1221122222222211  1122   247


Q ss_pred             cEEEEccCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCceEEEEc
Q psy14567         83 DVLINNAAVARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDH-KIQGSIVNVS  141 (238)
Q Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~g~iv~is  141 (238)
                      |++|.++|......   ++..++    ++.|.    .+.+...+.+.+. +..+.++.+|
T Consensus        81 dvVVitag~~~~~g---~sr~dl----l~~N~----~i~k~~~~~i~k~a~~~~~iivvs  129 (154)
T d5mdha1          81 DVAILVGSMPRRDG---MERKDL----LKANV----KIFKCQGAALDKYAKKSVKVIVVG  129 (154)
T ss_dssp             SEEEECCSCCCCTT---CCTTTT----HHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             eEEEEecccCCCCC---CchhHH----HHHhH----HHHHHHHHHHHhhCCCceEEEEec
Confidence            99999999764322   222221    23333    4455555555553 3234455554

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=95.77  E-value=0.0098  Score=42.10  Aligned_cols=40  Identities=8%  Similarity=-0.014  Sum_probs=34.2

Q ss_pred             CCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF   56 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (238)
                      .|-|+ |.+|.++|..|+++|++|.+.+|+++..+.+.+..
T Consensus         5 aIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~   44 (184)
T d1bg6a2           5 AVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG   44 (184)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             EEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcC
Confidence            34454 78999999999999999999999999988887654

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.77  E-value=0.0031  Score=45.41  Aligned_cols=44  Identities=7%  Similarity=-0.049  Sum_probs=35.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ   54 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   54 (238)
                      ++.+.++|-|+ |-||..+|..++..|++|++.+++++.+++..+
T Consensus         2 ~~I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~   45 (186)
T d1wdka3           2 KDVKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLA   45 (186)
T ss_dssp             CCCSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhh
Confidence            34566666676 779999999999999999999999987665443

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=95.66  E-value=0.035  Score=37.98  Aligned_cols=107  Identities=17%  Similarity=0.233  Sum_probs=60.4

Q ss_pred             CCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHH----Hhh---CC-CceEEEeecCCHHHHHHHHHhcCCccEE
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSL----KQA---FP-NVQTVQVDLQDWARTRAAVSKVGPVDVL   85 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~----~~~---~~-~~~~~~~D~~~~~~v~~~~~~~g~id~l   85 (238)
                      .|.|+ |.+|.++|..|+..|.  ++++++++++.++..    .+.   .+ ......   .+.++       +..-|++
T Consensus         5 ~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~---~d~~~-------l~~adiV   73 (146)
T d1hyha1           5 GIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWAA-------LADADVV   73 (146)
T ss_dssp             EEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGGG-------GTTCSEE
T ss_pred             EEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec---cCHHH-------hccccEE
Confidence            45574 8999999999998874  899999998764432    211   11 122222   22222       2236999


Q ss_pred             EEccCCCCCCCC-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEc
Q psy14567         86 INNAAVARFDRF-LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS  141 (238)
Q Consensus        86 i~~ag~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~is  141 (238)
                      |.+||....... ..++..    ..++.|    ..+++...+.+.+..+.+.++.+|
T Consensus        74 VitaG~~~~~~~~~g~~R~----~l~~~N----~~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          74 ISTLGNIKLQQDNPTGDRF----AELKFT----SSMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             EECCSCGGGTC-------C----TTHHHH----HHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             EEeccccccccccCCccHH----HHHHHH----HHHHHHHHHHHhhcCCCeEEEEec
Confidence            999997642110 011111    112334    345566667776665466666665

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.59  E-value=0.012  Score=38.42  Aligned_cols=69  Identities=9%  Similarity=0.010  Sum_probs=51.7

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      ..+++|-| +|-+|+-++.+..+.|+++++.+.+++....-   . .-.++..|..|.+.+.++.... .+|++.
T Consensus        11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~---v-a~~~i~~~~~d~~~l~~~~~~~-~~DviT   79 (111)
T d1kjqa2          11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMH---V-AHRSHVINMLDGDALRRVVELE-KPHYIV   79 (111)
T ss_dssp             CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG---G-SSEEEECCTTCHHHHHHHHHHH-CCSEEE
T ss_pred             CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh---c-CCeEEECCCCCHHHHHHHHHhh-CCceEE
Confidence            34566766 56799999999999999999999887652111   1 1356789999999999988654 478873

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.0064  Score=43.95  Aligned_cols=41  Identities=12%  Similarity=0.028  Sum_probs=33.3

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ   54 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   54 (238)
                      +.++|-|+ |-+|..+|..++..|+.|++.+++++.+++..+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~   45 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   45 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHh
Confidence            34455565 779999999999999999999999987665543

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.47  E-value=0.0048  Score=41.55  Aligned_cols=71  Identities=11%  Similarity=0.100  Sum_probs=49.6

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEE-ecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEccCC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIA-LSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNAAV   91 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~ag~   91 (238)
                      ++|.|++|.+|+++++.+.+.|..++. ++++..      ....+.+ +..|+|.++.+.+.++..  .+.-+|+-+.|.
T Consensus         3 i~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~------~~~~~~D-VvIDFS~p~~~~~~l~~~~~~~~p~ViGTTG~   75 (128)
T d1vm6a3           3 YGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV------EELDSPD-VVIDFSSPEALPKTVDLCKKYRAGLVLGTTAL   75 (128)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE------EECSCCS-EEEECSCGGGHHHHHHHHHHHTCEEEECCCSC
T ss_pred             EEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH------HHhccCC-EEEEecCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence            577899999999999999999987664 344432      1222333 358999999987777654  245677666664


Q ss_pred             C
Q psy14567         92 A   92 (238)
Q Consensus        92 ~   92 (238)
                      .
T Consensus        76 ~   76 (128)
T d1vm6a3          76 K   76 (128)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.39  E-value=0.041  Score=37.72  Aligned_cols=58  Identities=14%  Similarity=0.154  Sum_probs=42.1

Q ss_pred             CCchHHHHHHHHhhCC-CEEEEecCChHhHHHHHhhCCCceEE-------Eeec----CCHHHHHHHHHhc
Q psy14567         21 KPGIGRCIVEKLSQHE-AIIIALSKTQANLDSLKQAFPNVQTV-------QVDL----QDWARTRAAVSKV   79 (238)
Q Consensus        21 s~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~-------~~D~----~~~~~v~~~~~~~   79 (238)
                      .|.+|.++++.|.+.| .+|++.+|++++.+.+.++++ +...       .+|+    ..+.++.++++++
T Consensus         8 ~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~-~~~~~~~~~v~~~Div~lavkP~~~~~v~~~l   77 (152)
T d1yqga2           8 GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELG-VETSATLPELHSDDVLILAVKPQDMEAACKNI   77 (152)
T ss_dssp             CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTC-CEEESSCCCCCTTSEEEECSCHHHHHHHHTTC
T ss_pred             CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcc-cccccccccccccceEEEecCHHHHHHhHHHH
Confidence            3899999999998887 799999999999999888763 1110       1121    2366677777766

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.20  E-value=0.013  Score=41.47  Aligned_cols=38  Identities=8%  Similarity=0.118  Sum_probs=34.4

Q ss_pred             CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC
Q psy14567         20 PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP   57 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   57 (238)
                      |.|-+|.++|+.|++.|++|.+.+|++++.+++.+...
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCC
Confidence            34789999999999999999999999999999987764

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.19  E-value=0.053  Score=37.85  Aligned_cols=68  Identities=19%  Similarity=0.173  Sum_probs=54.0

Q ss_pred             CCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         21 KPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        21 s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      .|-.|++.++.....|++|.+++.+.++++++...++..  +..-.++++.+.+.+++   -|++|.++=+..
T Consensus        40 aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~--~~~~~~~~~~l~~~~~~---aDivI~aalipG  107 (168)
T d1pjca1          40 GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR--VELLYSNSAEIETAVAE---ADLLIGAVLVPG  107 (168)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG--SEEEECCHHHHHHHHHT---CSEEEECCCCTT
T ss_pred             CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccc--ceeehhhhhhHHHhhcc---CcEEEEeeecCC
Confidence            367899999999999999999999999999998876542  23345667777777774   699999997654

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.67  E-value=0.032  Score=38.96  Aligned_cols=42  Identities=7%  Similarity=-0.129  Sum_probs=34.2

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC--EEEEecCChHhHHHHHhhC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA--IIIALSKTQANLDSLKQAF   56 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~   56 (238)
                      .++|.| .|-||.++|+.|.+.|.  +|+..+|+++.++...+..
T Consensus         3 ~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~   46 (171)
T d2g5ca2           3 NVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG   46 (171)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT
T ss_pred             EEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhh
Confidence            355665 48999999999999985  7999999999888776654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.65  E-value=0.0084  Score=43.62  Aligned_cols=45  Identities=7%  Similarity=-0.072  Sum_probs=36.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF   56 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (238)
                      +.++++|-| -|.+|.++|+.|.+.|++|++.+.+...+.......
T Consensus        26 ~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~~g   70 (201)
T d1c1da1          26 DGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVALG   70 (201)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHhhc
Confidence            444555554 578999999999999999999999998887765543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.47  E-value=0.021  Score=39.35  Aligned_cols=59  Identities=12%  Similarity=0.143  Sum_probs=43.6

Q ss_pred             CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         20 PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      |.|.+|.++++.|.+.|+++++..|+.++.+++.++.+- ..    ..+   .+++++   .-|++|.+.
T Consensus         7 G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~-~~----~~~---~~~~~~---~~dvIilav   65 (152)
T d2ahra2           7 GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLAL-PY----AMS---HQDLID---QVDLVILGI   65 (152)
T ss_dssp             CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTC-CB----CSS---HHHHHH---TCSEEEECS
T ss_pred             eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccce-ee----ech---hhhhhh---ccceeeeec
Confidence            457899999999999999999999999999888766531 11    122   233455   358888775

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=94.29  E-value=0.81  Score=35.06  Aligned_cols=69  Identities=13%  Similarity=0.028  Sum_probs=45.5

Q ss_pred             CCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhC-------CCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         19 YPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAF-------PNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        19 G~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      .++||++.+.    +..|+ .|+.++.++..++...+..       .++.++..|+-  +.++.+.++-.++|++|....
T Consensus       153 ~~~G~~sl~a----a~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~--~~l~~~~~~~~~fD~Ii~DPP  226 (317)
T d2b78a2         153 SYTAAFSVAA----AMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF--DYFKYARRHHLTYDIIIIDPP  226 (317)
T ss_dssp             CTTTHHHHHH----HHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH--HHHHHHHHTTCCEEEEEECCC
T ss_pred             CCCcHHHHHH----HhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH--HHHHHHHhhcCCCCEEEEcCh
Confidence            4556666553    44777 7999999987655433221       24778888883  445556555567999999976


Q ss_pred             CCC
Q psy14567         91 VAR   93 (238)
Q Consensus        91 ~~~   93 (238)
                      .+.
T Consensus       227 ~f~  229 (317)
T d2b78a2         227 SFA  229 (317)
T ss_dssp             CC-
T ss_pred             hhc
Confidence            554

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.23  E-value=0.032  Score=37.64  Aligned_cols=74  Identities=15%  Similarity=0.211  Sum_probs=48.0

Q ss_pred             CCCCCCCCchHHHHHHHHhh-CCCEEEE-ecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhc--CCccEEEEccC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQ-HEAIIIA-LSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNAA   90 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~-~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~ag   90 (238)
                      ++|.|++|.+|+++++...+ .+.+++. +++.. .+..+...  +.. +..|+|.++.+.+.++..  .++-+|+-+.|
T Consensus         2 I~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~~~~~--~~D-vvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG   77 (135)
T d1yl7a1           2 VGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSLLTDG--NTE-VVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG   77 (135)
T ss_dssp             EEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHHHHTT--TCS-EEEECCCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhhhccc--cCC-EEEEcccHHHHHHHHHHHHhcCCCEEEeccc
Confidence            46789999999999998865 4566654 44433 33333322  223 458999998887776554  34667766666


Q ss_pred             CC
Q psy14567         91 VA   92 (238)
Q Consensus        91 ~~   92 (238)
                      ..
T Consensus        78 ~~   79 (135)
T d1yl7a1          78 FT   79 (135)
T ss_dssp             CC
T ss_pred             cc
Confidence            43

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.18  E-value=0.035  Score=36.02  Aligned_cols=58  Identities=9%  Similarity=-0.051  Sum_probs=37.6

Q ss_pred             eeeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH-hHHHHHhhCCCceEEEeecC
Q psy14567          5 AKLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA-NLDSLKQAFPNVQTVQVDLQ   67 (238)
Q Consensus         5 ~~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~D~~   67 (238)
                      -+|++++..+   .|+ |.+|..-++.|++.|++|++++.... ....+.+. +.+.+..-++.
T Consensus         8 l~l~~k~vlV---vG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~-~~i~~~~~~~~   66 (113)
T d1pjqa1           8 CQLRDRDCLI---VGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANE-GMLTLVEGPFD   66 (113)
T ss_dssp             ECCBTCEEEE---ECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTT-TSCEEEESSCC
T ss_pred             EEeCCCEEEE---ECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhc-CCceeeccCCC
Confidence            3566665555   443 57999999999999999988876543 33344332 35555555443

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.90  E-value=0.064  Score=41.05  Aligned_cols=26  Identities=12%  Similarity=0.040  Sum_probs=23.0

Q ss_pred             CCCchHHHHHHHHhhCCCEEEEecCC
Q psy14567         20 PKPGIGRCIVEKLSQHEAIIIALSKT   45 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~~V~~~~r~   45 (238)
                      .||..|.++|++|..+|+.|+++.+.
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecC
Confidence            67899999999999999999988543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.74  E-value=0.02  Score=42.41  Aligned_cols=46  Identities=11%  Similarity=0.132  Sum_probs=36.0

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF   56 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (238)
                      |++++..+   - |.|.+|.++|+.|.+.|++|++.+.+...++.+....
T Consensus        37 l~g~~v~I---q-G~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~   82 (230)
T d1leha1          37 LEGLAVSV---Q-GLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE   82 (230)
T ss_dssp             CTTCEEEE---E-CCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCCEEEE---E-CCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence            44444444   3 3478999999999999999999999998887776544

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=93.59  E-value=0.037  Score=37.87  Aligned_cols=73  Identities=15%  Similarity=0.122  Sum_probs=45.3

Q ss_pred             CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCC-----------ceEEEeecCCHHHHHHHHHhcC-CccEEEE
Q psy14567         20 PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPN-----------VQTVQVDLQDWARTRAAVSKVG-PVDVLIN   87 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-----------~~~~~~D~~~~~~v~~~~~~~g-~id~li~   87 (238)
                      |+|.+|+++++.|.+.+..+.+.+|+.++++++.+....           .+++-.=+. ++.+.++.+++. +=.++|+
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~v~-d~~i~~v~~~l~~~~~ivi~   84 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVIVP-DRYIKTVANHLNLGDAVLVH   84 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEECSC-TTTHHHHHTTTCCSSCCEEE
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEecc-chhhhHHHhhhcccceeeee
Confidence            357899999998866444446789999999999887741           112212222 355677777763 3356677


Q ss_pred             ccCCCC
Q psy14567         88 NAAVAR   93 (238)
Q Consensus        88 ~ag~~~   93 (238)
                      +++...
T Consensus        85 ~s~~~~   90 (153)
T d2i76a2          85 CSGFLS   90 (153)
T ss_dssp             CCSSSC
T ss_pred             cccchh
Confidence            776543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.48  E-value=0.025  Score=40.02  Aligned_cols=41  Identities=17%  Similarity=0.156  Sum_probs=32.4

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF   56 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (238)
                      .++|-| +||.+++++..|.+.| +|.+..|+.++.+++.+.+
T Consensus        20 ~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1          20 NIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             EEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             EEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            344443 4789999999998777 9999999999988876554

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=93.37  E-value=0.2  Score=35.70  Aligned_cols=73  Identities=16%  Similarity=0.201  Sum_probs=55.8

Q ss_pred             CCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC----CCceEEEeecCCHHHHHHHHHhc--CCccEEEEcc
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF----PNVQTVQVDLQDWARTRAAVSKV--GPVDVLINNA   89 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~--g~id~li~~a   89 (238)
                      =.|.|+||...++.+.+ . +.+|+.++++++.++...+..    .++.++..++++...   .++.+  +++|.++...
T Consensus        29 D~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~---~~~~~~~~~vdgIl~Dl  103 (192)
T d1m6ya2          29 DCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF---LLKTLGIEKVDGILMDL  103 (192)
T ss_dssp             ETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH---HHHHTTCSCEEEEEEEC
T ss_pred             EecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHH---HHHHcCCCCcceeeecc
Confidence            34888899999998876 3 468999999999887666544    358889998877554   44443  6899999999


Q ss_pred             CCCC
Q psy14567         90 AVAR   93 (238)
Q Consensus        90 g~~~   93 (238)
                      |+..
T Consensus       104 GvSs  107 (192)
T d1m6ya2         104 GVST  107 (192)
T ss_dssp             SCCH
T ss_pred             chhH
Confidence            9853

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=93.04  E-value=0.98  Score=31.96  Aligned_cols=133  Identities=16%  Similarity=0.064  Sum_probs=77.1

Q ss_pred             CchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCCCCCCCCC
Q psy14567         22 PGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARFDRFLDID  101 (238)
Q Consensus        22 ~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~~~~~~~~  101 (238)
                      .....+++..|...|..++.+.-..                   -.+.+.+.+.....+.++.+|+..+........ .+
T Consensus        37 ~~~~~~l~~~l~~~g~~~~~~~~~~-------------------~~~~~~l~~~~~~~~~~~~vv~l~~~~~~~~~~-~~   96 (209)
T d2fr1a2          37 DETSTAAREALESAGARVRELVVDA-------------------RCGRDELAERLRSVGEVAGVLSLLAVDEAEPEE-AP   96 (209)
T ss_dssp             HHHHHHHHHHHHTTSCEEEEEECCT-------------------TCCHHHHHHHHTTSCCCSEEEECTTTTCCCCSS-CG
T ss_pred             hHHHHHHHHHHHhCCCeEEEecCCC-------------------ccCHHHHHHHhhccCCCCeEEEeCCCCCCCCcc-hh
Confidence            3466667777777777665443221                   123455666666778899999987654322111 11


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEccccccccCCCCchhhHHHHHHHHHHHHHHHHhCCCCeEEE
Q psy14567        102 EENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVSSIAGKTALEGHTIYSASKAALDSITRTMALELGPYNIRVN  181 (238)
Q Consensus       102 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~al~~l~~~l~~~~~~~~i~v~  181 (238)
                      .       ....+...+.+++.+.    +.+...++.+++....... .....-....+++.+|+|+++.|+....+++.
T Consensus        97 ~-------~~~~~~~~l~l~qal~----~~~~~~~l~~vT~~a~~~~-~~d~~~~p~~A~l~Gl~r~~~~E~P~l~~~~v  164 (209)
T d2fr1a2          97 L-------ALASLADTLSLVQAMV----SAELGCPLWTVTESAVATG-PFERVRNAAHGALWGVGRVIALENPAVWGGLV  164 (209)
T ss_dssp             G-------GCHHHHHHHHHHHHHH----HTTCCCCEEEEEESCSCSS-TTSCCSCGGGHHHHHHHHHHHHHCGGGEEEEE
T ss_pred             H-------HHHHHHHHHHHHHHHH----hCCCCCcEEEEEcCCcccC-CCcccCCHhHHhHHHHHHHHHHhCCCceEEEE
Confidence            1       1122445555666553    2222456777765443222 22223346788999999999999987666776


Q ss_pred             EEeCC
Q psy14567        182 SVQPT  186 (238)
Q Consensus       182 ~i~PG  186 (238)
                      .+-+.
T Consensus       165 Dl~~~  169 (209)
T d2fr1a2         165 DVPAG  169 (209)
T ss_dssp             EECTT
T ss_pred             ECCCC
Confidence            66544

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=92.55  E-value=0.24  Score=30.89  Aligned_cols=61  Identities=18%  Similarity=0.166  Sum_probs=40.0

Q ss_pred             CchH-HHHHHHHhhCCCEEEEecCChH-hHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         22 PGIG-RCIVEKLSQHEAIIIALSKTQA-NLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        22 ~gIG-~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      +|+| .++|+.|.+.|+.|...+++.+ ..+.+.+.  .+.+...+-.  +       .+.+.|.+|.+.++..
T Consensus        17 gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~--Gi~v~~g~~~--~-------~i~~~d~vV~S~AI~~   79 (96)
T d1p3da1          17 GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQA--GAKIYIGHAE--E-------HIEGASVVVVSSAIKD   79 (96)
T ss_dssp             TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHT--TCEEEESCCG--G-------GGTTCSEEEECTTSCT
T ss_pred             CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHC--CCeEEECCcc--c-------cCCCCCEEEECCCcCC
Confidence            4566 5569999999999999998754 34455543  3444433322  1       1235799999998753

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.28  E-value=0.9  Score=34.68  Aligned_cols=71  Identities=6%  Similarity=-0.010  Sum_probs=47.9

Q ss_pred             CCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh-----C--CCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         19 YPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA-----F--PNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        19 G~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~--~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      .++|+++.+++    ..|++|+.++.+...++...+.     .  ..+.++..|+.  +.+++..++-.+.|+||.+.-.
T Consensus       141 ~~tG~~sl~aa----~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~--~~l~~~~~~~~~fD~IilDPP~  214 (309)
T d2igta1         141 GYTGVASLVAA----AAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM--KFIQREERRGSTYDIILTDPPK  214 (309)
T ss_dssp             CTTCHHHHHHH----HTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH--HHHHHHHHHTCCBSEEEECCCS
T ss_pred             CCCcHHHHHHH----hCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH--HhHHHHhhcCCCCCEEEECCCc
Confidence            34566666544    5789999999999876654432     1  14778888884  4455555555679999999876


Q ss_pred             CCCC
Q psy14567         92 ARFD   95 (238)
Q Consensus        92 ~~~~   95 (238)
                      +...
T Consensus       215 f~~~  218 (309)
T d2igta1         215 FGRG  218 (309)
T ss_dssp             EEEC
T ss_pred             cccc
Confidence            5443

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=92.25  E-value=0.21  Score=30.71  Aligned_cols=59  Identities=14%  Similarity=0.108  Sum_probs=40.8

Q ss_pred             CchHH-HHHHHHhhCCCEEEEecCChHh-HHHHHhhCCCceEEEe-ecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         22 PGIGR-CIVEKLSQHEAIIIALSKTQAN-LDSLKQAFPNVQTVQV-DLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        22 ~gIG~-~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~-D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      +|+|. ++|+.|.+.|+.|...+++.+. .+.+.+..  +.+... |..+          +...|.+|.+.++.
T Consensus        10 gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~G--i~i~~gh~~~~----------i~~~d~vV~SsAI~   71 (89)
T d1j6ua1          10 GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLG--IPIFVPHSADN----------WYDPDLVIKTPAVR   71 (89)
T ss_dssp             TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTT--CCEESSCCTTS----------CCCCSEEEECTTCC
T ss_pred             CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCC--CeEEeeecccc----------cCCCCEEEEecCcC
Confidence            57887 6899999999999999988643 44555543  433322 2211          23589999999885

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=92.24  E-value=0.026  Score=39.04  Aligned_cols=34  Identities=6%  Similarity=-0.077  Sum_probs=28.8

Q ss_pred             CCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHH
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLD   50 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~   50 (238)
                      +|.|+ |.||..++..|++.|+.|.+++|+.+..+
T Consensus         4 ~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~   37 (167)
T d1ks9a2           4 TVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYC   37 (167)
T ss_dssp             EEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEE
T ss_pred             EEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhh
Confidence            34466 89999999999999999999999886543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=92.24  E-value=0.077  Score=35.11  Aligned_cols=67  Identities=12%  Similarity=-0.015  Sum_probs=47.8

Q ss_pred             CCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEcc
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNA   89 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~a   89 (238)
                      +|.| -|.+|..+++.|.  |..|+++..+++..+.+...  ++.++..|.++++.++++  .+.+-+.+|.+.
T Consensus         4 vI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~--~~~~i~Gd~~~~~~L~~a--~i~~A~~vi~~~   70 (129)
T d2fy8a1           4 VICG-WSESTLECLRELR--GSEVFVLAEDENVRKKVLRS--GANFVHGDPTRVSDLEKA--NVRGARAVIVNL   70 (129)
T ss_dssp             EEES-CCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHT--TCEEEESCTTSHHHHHHT--TCTTCSEEEECC
T ss_pred             EEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhc--CccccccccCCHHHHHHh--hhhcCcEEEEec
Confidence            3444 4679999999985  55677788888888777653  678899999998876653  223456666544

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.14  E-value=0.21  Score=35.76  Aligned_cols=53  Identities=17%  Similarity=0.193  Sum_probs=42.0

Q ss_pred             HHhhCCC-EEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         31 KLSQHEA-IIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        31 ~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      .++..|+ +|+.++.++..++...+...++.++.+|+.+.+         +++|++|.|..+.
T Consensus        65 ~a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~~~l~---------~~fD~Vi~NPPfg  118 (197)
T d1ne2a_          65 GSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEIS---------GKYDTWIMNPPFG  118 (197)
T ss_dssp             HHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCC---------CCEEEEEECCCC-
T ss_pred             HHHHcCCCcccccccCHHHHHHHHHccccccEEEEehhhcC---------CcceEEEeCcccc
Confidence            3555776 799999999999888888888999999986421         5799999997653

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=92.13  E-value=0.11  Score=37.36  Aligned_cols=35  Identities=20%  Similarity=0.147  Sum_probs=27.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ   46 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~   46 (238)
                      +.++++|.| .|.||+.+++.|...|++|+..++..
T Consensus        44 ~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          44 GQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cceeeeeee-cccccccccccccccceeeeccCCcc
Confidence            345566644 46899999999999999999998754

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.11  E-value=0.1  Score=37.49  Aligned_cols=36  Identities=17%  Similarity=0.196  Sum_probs=32.6

Q ss_pred             CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh
Q psy14567         20 PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA   55 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (238)
                      |.|-+|..+|..|++.|++|+..+.+++..+++.+.
T Consensus         7 GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g   42 (202)
T d1mv8a2           7 GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQG   42 (202)
T ss_dssp             CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT
T ss_pred             CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhccc
Confidence            457899999999999999999999999999888754

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=91.88  E-value=0.087  Score=37.55  Aligned_cols=41  Identities=7%  Similarity=-0.031  Sum_probs=33.7

Q ss_pred             CCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF   56 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (238)
                      +.|-|| |-.|.++|..|++.|.+|.+.+|+++..+++....
T Consensus        10 I~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~   50 (189)
T d1n1ea2          10 AVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKR   50 (189)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHT
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcc
Confidence            444443 56999999999999999999999999988886654

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=91.79  E-value=0.38  Score=36.99  Aligned_cols=69  Identities=12%  Similarity=0.111  Sum_probs=45.7

Q ss_pred             CCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----CCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCC
Q psy14567         19 YPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----PNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVAR   93 (238)
Q Consensus        19 G~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~   93 (238)
                      .++||++.++|    ..+.+|+.++.++..++...+..     .++.++..|..+.  .+.+.+.-.+.|.||.+...+.
T Consensus       154 ~gtG~~s~~~a----~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~--~~~~~~~~~~fD~Vi~DpP~~~  227 (318)
T d1wxxa2         154 SYAGGFALHLA----LGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL--LRRLEKEGERFDLVVLDPPAFA  227 (318)
T ss_dssp             CTTTHHHHHHH----HHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH--HHHHHHTTCCEEEEEECCCCSC
T ss_pred             CCCcHHHHHHH----hcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHH--hhhhHhhhcCCCEEEEcCCccc
Confidence            35567766544    34669999999998766554322     4678888888442  3334444457999999987654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=91.66  E-value=0.23  Score=36.64  Aligned_cols=35  Identities=17%  Similarity=0.107  Sum_probs=25.7

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCC-EEEEecC
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEA-IIIALSK   44 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r   44 (238)
                      +|+..++.++   | .||+|.+++..|+..|. ++.+++.
T Consensus        27 kL~~~~Vlii---G-~GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          27 ALKDSRVLIV---G-LGGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HHHHCEEEEE---C-CSHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             HHhCCCEEEE---C-CCHHHHHHHHHHHHcCCCeEEEECC
Confidence            3444444443   3 47899999999999998 7888774

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.55  E-value=0.13  Score=36.26  Aligned_cols=35  Identities=11%  Similarity=0.147  Sum_probs=27.7

Q ss_pred             CCchHHHHHHHHhhCCCEEEEecCC--hHhHHHHHhh
Q psy14567         21 KPGIGRCIVEKLSQHEAIIIALSKT--QANLDSLKQA   55 (238)
Q Consensus        21 s~gIG~~ia~~l~~~G~~V~~~~r~--~~~~~~~~~~   55 (238)
                      +|..|.++|..|++.|.+|.+.+|.  ++..+++.+.
T Consensus         8 aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~   44 (180)
T d1txga2           8 AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAG   44 (180)
T ss_dssp             CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhh
Confidence            4789999999999999999999885  3345555443

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=91.28  E-value=0.14  Score=36.73  Aligned_cols=36  Identities=17%  Similarity=0.169  Sum_probs=28.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA   47 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~   47 (238)
                      +.++++|.| -|.||+.+|+.|...|++|+..++...
T Consensus        42 ~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          42 RDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             GGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cCCeEEEec-ccccchhHHHhHhhhcccccccCcccc
Confidence            445566654 468999999999999999999987654

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=91.09  E-value=0.56  Score=32.41  Aligned_cols=117  Identities=12%  Similarity=0.047  Sum_probs=57.7

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhC----CCEEEEecCChHhHHHHHhhC--------CCceEEEeecCCHHHHHHHHH
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQH----EAIIIALSKTQANLDSLKQAF--------PNVQTVQVDLQDWARTRAAVS   77 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~----G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~D~~~~~~v~~~~~   77 (238)
                      ++.+++.|-|||.|-...+...+...    +.++++++.++++++......        ........  +|.   .+.++
T Consensus         2 k~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~---~eal~   76 (167)
T d1u8xx1           2 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDP---EEAFT   76 (167)
T ss_dssp             CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCH---HHHHS
T ss_pred             CCceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CCh---hhccC
Confidence            34455555333333323333333322    248999999998876332221        12222211  121   22333


Q ss_pred             hcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHhccCCceEEEEc
Q psy14567         78 KVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDVN----------------IKAVINISQVVSKTMIDHKIQGSIVNVS  141 (238)
Q Consensus        78 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n----------------~~~~~~~~~~~~~~~~~~~~~g~iv~is  141 (238)
                         .-|+||+.+|......   ++.    +..+..|                .....-+++.+.+.+.+..+.+-++++|
T Consensus        77 ---~AD~Vvitag~~~~~g---~~r----d~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~T  146 (167)
T d1u8xx1          77 ---DVDFVMAHIRVGKYAM---RAL----DEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYS  146 (167)
T ss_dssp             ---SCSEEEECCCTTHHHH---HHH----HHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             ---CCCEEEECCCcCCCCc---eeH----HHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence               4699999999764311   111    1111111                1234455667777777766566666665

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=91.09  E-value=0.38  Score=32.70  Aligned_cols=63  Identities=14%  Similarity=0.143  Sum_probs=41.0

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhC--CCEEEEe--cCChHhHHHHHhhCCCceEEEeecCCHHHHHH
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQH--EAIIIAL--SKTQANLDSLKQAFPNVQTVQVDLQDWARTRA   74 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   74 (238)
                      ++.+.|-|+||-||.....-+.++  .++|+.+  .+|-+.+.+...++..-.+...|-...+.+..
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~   68 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKE   68 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHH
Confidence            456777899999999999988765  4677654  46666676666666443334445444444433

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=91.08  E-value=0.082  Score=37.86  Aligned_cols=37  Identities=11%  Similarity=0.050  Sum_probs=29.1

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN   48 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~   48 (238)
                      +.++++|.| -|.||+.+|+.+...|++|+..++....
T Consensus        48 ~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~   84 (193)
T d1mx3a1          48 RGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSD   84 (193)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred             eCceEEEec-cccccccceeeeeccccceeeccCcccc
Confidence            445566654 4689999999999999999999886543

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=90.84  E-value=0.53  Score=33.04  Aligned_cols=70  Identities=14%  Similarity=0.170  Sum_probs=48.0

Q ss_pred             CchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHH-------------------HHHHHHHhcCCc
Q psy14567         22 PGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWA-------------------RTRAAVSKVGPV   82 (238)
Q Consensus        22 ~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-------------------~v~~~~~~~g~i   82 (238)
                      |-.|.+.++.....|++|.+++.+.++++++.+.++..  +..+..+.+                   +.+.+.+.+.+-
T Consensus        38 GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~--i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~l~~~l~~a  115 (183)
T d1l7da1          38 GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKF--ITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKT  115 (183)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEE--CCC-----------------------CCHHHHHHHHHTTC
T ss_pred             cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcce--EEEeccccccccccccchhhcCHHHHHHHHHHHHHHHHhh
Confidence            67999999999999999999999999999998876532  211111111                   112233444568


Q ss_pred             cEEEEccCCCC
Q psy14567         83 DVLINNAAVAR   93 (238)
Q Consensus        83 d~li~~ag~~~   93 (238)
                      |++|-.+=+..
T Consensus       116 DlVI~talipG  126 (183)
T d1l7da1         116 DIAITTALIPG  126 (183)
T ss_dssp             SEEEECCCCTT
T ss_pred             hhheeeeecCC
Confidence            99999986654

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=90.66  E-value=0.94  Score=31.19  Aligned_cols=122  Identities=9%  Similarity=0.017  Sum_probs=63.7

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhC----CCEEEEecCChHh--HHHHHhhC------CCceEEEeecCCHHHHHHHHHh
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQH----EAIIIALSKTQAN--LDSLKQAF------PNVQTVQVDLQDWARTRAAVSK   78 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~----G~~V~~~~r~~~~--~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~   78 (238)
                      |+++.+|-+||.|.+.+++..+...    ..++++++++++.  ++.+....      .+........+|..+   .++ 
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~---al~-   76 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRR---ALD-   76 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHH---HHT-
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchh---hcC-
Confidence            4566666566778887777766543    2489999988743  33222100      122223334444322   233 


Q ss_pred             cCCccEEEEccCCCCCCCC------------CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEc
Q psy14567         79 VGPVDVLINNAAVARFDRF------------LDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS  141 (238)
Q Consensus        79 ~g~id~li~~ag~~~~~~~------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~is  141 (238)
                        .-|++|+++|.......            ...+... ...+  .......-+++.+.+.+.+..+.+-++.+|
T Consensus        77 --gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g-~~~~--~~~~~n~~i~~~i~~~i~~~~pda~~i~vt  146 (169)
T d1s6ya1          77 --GADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNG-PGGL--FKGLRTIPVILDIIRDMEELCPDAWLINFT  146 (169)
T ss_dssp             --TCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSST-HHHH--HHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             --CCCEEEEccccCCCCCeehhhhhhhhcCceeccccC-cchh--hhccccHHHHHHHHHHHhhcCCCeEEEEeC
Confidence              35999999987642110            0000000 0000  112345556677777777766566666665

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.54  E-value=0.52  Score=32.42  Aligned_cols=28  Identities=18%  Similarity=0.179  Sum_probs=25.5

Q ss_pred             CCchHHHHHHHHhhCCCEEEEecCChHh
Q psy14567         21 KPGIGRCIVEKLSQHEAIIIALSKTQAN   48 (238)
Q Consensus        21 s~gIG~~ia~~l~~~G~~V~~~~r~~~~   48 (238)
                      .|-||+.+|+.+...|++|+++.+.+-+
T Consensus        32 yG~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          32 YGDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             cccccHHHHHHHHhCCCeeEeeecccch
Confidence            4689999999999999999999998854

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=90.51  E-value=0.097  Score=36.64  Aligned_cols=117  Identities=8%  Similarity=0.020  Sum_probs=59.9

Q ss_pred             CcCCCCCCCCCCchHH--HHHHHHhhC----CCEEEEecCChHhHHHHHh-------hC-CCceEEEeecCCHHHHHHHH
Q psy14567         11 RTNTKGGDYPKPGIGR--CIVEKLSQH----EAIIIALSKTQANLDSLKQ-------AF-PNVQTVQVDLQDWARTRAAV   76 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~--~ia~~l~~~----G~~V~~~~r~~~~~~~~~~-------~~-~~~~~~~~D~~~~~~v~~~~   76 (238)
                      ++++.+| || |.+|.  ++...++..    +.+++++++++++++....       .. ....+.  -.+|.   ++.+
T Consensus         2 ~mKI~iI-Ga-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~--~~td~---~eaL   74 (171)
T d1obba1           2 SVKIGII-GA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFE--KTMNL---DDVI   74 (171)
T ss_dssp             CCEEEEE-TT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEE--EESCH---HHHH
T ss_pred             CcEEEEE-CC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEE--EeCCh---hhcc
Confidence            3455555 43 44554  444445432    4599999999987654221       11 122222  12232   2233


Q ss_pred             HhcCCccEEEEccCCCCCCCCCCCChHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHhccCCce
Q psy14567         77 SKVGPVDVLINNAAVARFDRFLDIDEENLIDSIFDV--------------------NIKAVINISQVVSKTMIDHKIQGS  136 (238)
Q Consensus        77 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~--------------------n~~~~~~~~~~~~~~~~~~~~~g~  136 (238)
                      +   .-|++|++++...+....   ..+  ...++.                    ......-+++.+.+.+.+..+.+.
T Consensus        75 ~---dad~Vv~~~~~g~~~~~~---~~~--~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~  146 (171)
T d1obba1          75 I---DADFVINTAMVGGHTYLE---KVR--QIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAW  146 (171)
T ss_dssp             T---TCSEEEECCCTTHHHHHH---HHH--HHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred             c---CCCeEeeeccccccccee---eeh--hcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeE
Confidence            3   469999999876432110   000  000000                    012355667777777777665667


Q ss_pred             EEEEcc
Q psy14567        137 IVNVSS  142 (238)
Q Consensus       137 iv~isS  142 (238)
                      ++++|-
T Consensus       147 ~i~~TN  152 (171)
T d1obba1         147 YLQAAN  152 (171)
T ss_dssp             EEECSS
T ss_pred             EEEECC
Confidence            777653

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=90.48  E-value=0.8  Score=30.92  Aligned_cols=58  Identities=9%  Similarity=0.083  Sum_probs=37.4

Q ss_pred             CCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCC----------CceEEEeecCCHHHHHHHHHhc
Q psy14567         21 KPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFP----------NVQTVQVDLQDWARTRAAVSKV   79 (238)
Q Consensus        21 s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~D~~~~~~v~~~~~~~   79 (238)
                      .|-+|.++|+.|.+.|+.+ ...|+.++..+..+...          ....+-..+.+.+.+....+.+
T Consensus         8 lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l   75 (156)
T d2cvza2           8 LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEAL   75 (156)
T ss_dssp             CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccc
Confidence            3789999999999988765 57788777666554432          2333334455556666555443

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=90.28  E-value=0.84  Score=31.93  Aligned_cols=64  Identities=22%  Similarity=0.333  Sum_probs=45.6

Q ss_pred             HHHhhCCCEEEEecCChHhHHHHHhhC-CCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCCCC
Q psy14567         30 EKLSQHEAIIIALSKTQANLDSLKQAF-PNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVARF   94 (238)
Q Consensus        30 ~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~~~   94 (238)
                      +++++.+.+|++++|.++.++...... +++.++..+.++.++...-. ..+++|.++..-|+...
T Consensus        34 ~~iL~~~~~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~-~~~~vdgIl~DLGvSs~   98 (182)
T d1wg8a2          34 RGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAAL-GVERVDGILADLGVSSF   98 (182)
T ss_dssp             HHHHHTTCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHT-TCSCEEEEEEECSCCHH
T ss_pred             HHHhcccCcEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHHHHHc-CCCccCEEEEEccCCHH
Confidence            444556779999999999877665433 46888898888765533222 23679999999998643

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.03  E-value=0.16  Score=34.44  Aligned_cols=59  Identities=8%  Similarity=0.106  Sum_probs=39.1

Q ss_pred             CCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         20 PKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        20 ~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      |.|.+|.++++.|++.|++|+..+++++......+..-.+    ++-     ..++++   .-|++|.+..
T Consensus         7 G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~----~~~-----~~e~~~---~~diIi~~v~   65 (152)
T d1i36a2           7 GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERARTVGV----TET-----SEEDVY---SCPVVISAVT   65 (152)
T ss_dssp             SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTC----EEC-----CHHHHH---TSSEEEECSC
T ss_pred             cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhhcccc----ccc-----HHHHHh---hcCeEEEEec
Confidence            3489999999999999999999888776655444332122    121     123444   3588887753

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=89.92  E-value=0.28  Score=34.53  Aligned_cols=37  Identities=16%  Similarity=0.155  Sum_probs=29.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHh
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQAN   48 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~   48 (238)
                      +.++++|.| -|.||+++++.+...|++|+..++....
T Consensus        43 ~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~   79 (184)
T d1ygya1          43 FGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSP   79 (184)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred             cceeeeecc-ccchhHHHHHHhhhccceEEeecCCCCh
Confidence            445666644 5789999999999999999999886543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.79  E-value=0.62  Score=35.82  Aligned_cols=103  Identities=13%  Similarity=0.151  Sum_probs=59.7

Q ss_pred             CCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         19 YPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        19 G~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      .++|+++.+++    ..|+ +|+.++.++..++...+..      .++.++..|+.  +.+..+...-.++|.+|.+...
T Consensus       154 ~g~G~~si~~a----~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~--~~~~~~~~~~~~fD~Vi~DpP~  227 (324)
T d2as0a2         154 TYTGGFAIHAA----IAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF--EEMEKLQKKGEKFDIVVLDPPA  227 (324)
T ss_dssp             CTTTHHHHHHH----HTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH--HHHHHHHHTTCCEEEEEECCCC
T ss_pred             Ccccchhhhhh----hcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh--hhhHHHHhccCCCCchhcCCcc
Confidence            45667776654    4566 8999999998766543322      24677777774  3344444444579999998865


Q ss_pred             CCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEEc
Q psy14567         92 ARFDRFLDIDEENLIDSIFDVNIKAVINISQVVSKTMIDHKIQGSIVNVS  141 (238)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~is  141 (238)
                      +....      .+ ...    .......+++.+.+.++.   +|.+++.|
T Consensus       228 ~~~~~------~~-~~~----~~~~y~~l~~~a~~ll~p---GG~lv~~s  263 (324)
T d2as0a2         228 FVQHE------KD-LKA----GLRAYFNVNFAGLNLVKD---GGILVTCS  263 (324)
T ss_dssp             SCSSG------GG-HHH----HHHHHHHHHHHHHTTEEE---EEEEEEEE
T ss_pred             ccCCH------HH-HHH----HHHHHHHHHHHHHHHcCC---CcEEEEEe
Confidence            53221      11 111    122334455666665543   46666554

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=89.64  E-value=0.11  Score=36.57  Aligned_cols=33  Identities=24%  Similarity=0.096  Sum_probs=25.4

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCCC-EEEEecCCh
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHEA-IIIALSKTQ   46 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G~-~V~~~~r~~   46 (238)
                      .++|.||||-.|..+.+.|+++-. ++..+..++
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~   36 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT   36 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccc
Confidence            467889999999999999998765 655544333

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.22  E-value=0.12  Score=41.64  Aligned_cols=28  Identities=14%  Similarity=0.035  Sum_probs=22.6

Q ss_pred             CCCCCCCchHHHHHHHHhhCCC-EEEEecC
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEA-IIIALSK   44 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~-~V~~~~r   44 (238)
                      +|.|+ ||||.++++.|+..|. ++.+++.
T Consensus        41 lvvG~-GglG~ei~k~L~~~Gvg~i~lvD~   69 (426)
T d1yovb1          41 LVIGA-GGLGCELLKNLALSGFRQIHVIDM   69 (426)
T ss_dssp             EEECS-STTHHHHHHHHHTTTCCCEEEECC
T ss_pred             EEECC-CHHHHHHHHHHHHcCCCeEEEEEC
Confidence            44454 6799999999999998 7888764

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=88.92  E-value=0.2  Score=34.95  Aligned_cols=61  Identities=10%  Similarity=-0.027  Sum_probs=42.5

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC-----------------CCceEEEeecCC
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF-----------------PNVQTVQVDLQD   68 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------------~~~~~~~~D~~~   68 (238)
                      .|..+....++--|+..|  . .+..|+++|++|+.++.++..++...+..                 ....++.+|..+
T Consensus        15 ~l~~~~~~rvLd~GCG~G--~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   91 (201)
T d1pjza_          15 SLNVVPGARVLVPLCGKS--Q-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA   91 (201)
T ss_dssp             HHCCCTTCEEEETTTCCS--H-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred             HcCCCCCCEEEEecCcCC--H-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccc
Confidence            455555556666675554  3 66688899999999999999887776643                 234667777765


Q ss_pred             H
Q psy14567         69 W   69 (238)
Q Consensus        69 ~   69 (238)
                      .
T Consensus        92 l   92 (201)
T d1pjza_          92 L   92 (201)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.82  E-value=0.088  Score=35.83  Aligned_cols=36  Identities=11%  Similarity=-0.114  Sum_probs=27.9

Q ss_pred             CCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCC
Q psy14567          9 PDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKT   45 (238)
Q Consensus         9 ~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~   45 (238)
                      ..+.+.++|.|| |.+|..-++.|++.|++|.+++..
T Consensus        10 ~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          10 QLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            345555556666 669999999999999999988643

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=88.45  E-value=0.086  Score=35.92  Aligned_cols=35  Identities=11%  Similarity=0.100  Sum_probs=25.9

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCC----CEEEEecCChHh
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHE----AIIIALSKTQAN   48 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G----~~V~~~~r~~~~   48 (238)
                      .++|.||||-+|+.+.+.|.++.    .+++...+++..
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~   41 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG   41 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccc
Confidence            46788999999999999887653    366666655443

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=88.33  E-value=0.59  Score=31.71  Aligned_cols=46  Identities=13%  Similarity=0.088  Sum_probs=32.7

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhC--CCEEEEe--cCChHhHHHHHhhCC
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQH--EAIIIAL--SKTQANLDSLKQAFP   57 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~   57 (238)
                      |+.+.|-|+||-||.....-..++  .++|+.+  .+|-+.+.+...++.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~   50 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFS   50 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHC
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHh
Confidence            345678899999999999988776  3576654  466666666555554

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=88.26  E-value=0.97  Score=31.50  Aligned_cols=66  Identities=12%  Similarity=0.121  Sum_probs=44.5

Q ss_pred             CCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         19 YPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        19 G~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      .|||.+|.+.    +.+|+ +|+.+..+....+.+.+..      .++.++..|+.  +.++.+.++-.+.|+++....
T Consensus        50 aGsG~~g~ea----~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~--~~l~~~~~~~~~fDlIflDPP  122 (182)
T d2fhpa1          50 SGSGGLAIEA----VSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN--RALEQFYEEKLQFDLVLLDPP  122 (182)
T ss_dssp             CTTCHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH--HHHHHHHHTTCCEEEEEECCC
T ss_pred             ccccccccee----eecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch--hhhhhhcccCCCcceEEechh
Confidence            4677788764    44888 7999999988766543322      24777888873  344555544457899987764

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.69  E-value=0.16  Score=34.62  Aligned_cols=35  Identities=11%  Similarity=-0.023  Sum_probs=28.0

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA   47 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~   47 (238)
                      .++++-.+.+-||.++|..|++.|.+|.++.+...
T Consensus        41 ~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          41 RVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             EEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             ceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            34444445689999999999999999999988653

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.47  E-value=0.39  Score=34.80  Aligned_cols=46  Identities=0%  Similarity=-0.108  Sum_probs=33.6

Q ss_pred             CCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC
Q psy14567          8 HPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF   56 (238)
Q Consensus         8 ~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   56 (238)
                      ..+....++.-|+..|   ..+..|++.|++|+.++-++..++...++.
T Consensus        42 ~~~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          42 KGKSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             TTCCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            3444445666676554   347788999999999999999988776654

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.40  E-value=0.049  Score=37.08  Aligned_cols=33  Identities=12%  Similarity=0.158  Sum_probs=24.5

Q ss_pred             CCCCCCCCCchHHHHHHHHhhCC---CEEEEecCCh
Q psy14567         14 TKGGDYPKPGIGRCIVEKLSQHE---AIIIALSKTQ   46 (238)
Q Consensus        14 v~~itG~s~gIG~~ia~~l~~~G---~~V~~~~r~~   46 (238)
                      .++|.||||-.|..+.+.|.++.   .++..++.++
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~   39 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAE   39 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecc
Confidence            45677999999999999997643   3666655444

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=87.35  E-value=0.51  Score=33.22  Aligned_cols=79  Identities=15%  Similarity=0.061  Sum_probs=46.8

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH----------hHHHHHhhCCCceEEEeecCCHHH--H-HHHHH
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA----------NLDSLKQAFPNVQTVQVDLQDWAR--T-RAAVS   77 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~D~~~~~~--v-~~~~~   77 (238)
                      +.++++|- |-|.||+.+++.+...|++|+..++...          .++++.+.. ++..+.+.+++...  + ++.++
T Consensus        43 ~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~~s-Dii~i~~plt~~T~~li~~~~l~  120 (188)
T d1sc6a1          43 RGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMS-DVVSLHVPENPSTKNMMGAKEIS  120 (188)
T ss_dssp             TTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHHHC-SEEEECCCSSTTTTTCBCHHHHH
T ss_pred             cceEEEEe-ecccchhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHhhc-cceeecccCCcchhhhccHHHHh
Confidence            44555554 4578999999999999999999987542          244444432 44455555544211  0 33444


Q ss_pred             hcCCccEEEEccCCC
Q psy14567         78 KVGPVDVLINNAAVA   92 (238)
Q Consensus        78 ~~g~id~li~~ag~~   92 (238)
                      .. +.+.++-|++..
T Consensus       121 ~m-k~~a~lIN~aRG  134 (188)
T d1sc6a1         121 LM-KPGSLLINASRG  134 (188)
T ss_dssp             HS-CTTEEEEECSCS
T ss_pred             hC-CCCCEEEEcCcH
Confidence            44 335555555443

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=87.03  E-value=0.12  Score=35.81  Aligned_cols=76  Identities=12%  Similarity=0.074  Sum_probs=48.2

Q ss_pred             CCCCCCCCchHHHHHHHHhhC-CCEEEE-ecCChHh-----HHH--------------HHhhCCCceEEEeecCCHHHHH
Q psy14567         15 KGGDYPKPGIGRCIVEKLSQH-EAIIIA-LSKTQAN-----LDS--------------LKQAFPNVQTVQVDLQDWARTR   73 (238)
Q Consensus        15 ~~itG~s~gIG~~ia~~l~~~-G~~V~~-~~r~~~~-----~~~--------------~~~~~~~~~~~~~D~~~~~~v~   73 (238)
                      ++|.|++|.+|+++++...+. +++++. ++|....     ..+              +........ +..|+|.++...
T Consensus         7 I~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~~~   85 (162)
T d1diha1           7 VAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEGTL   85 (162)
T ss_dssp             EEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHHHH
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHHHH
Confidence            467799999999999999775 556543 3443211     000              001111233 348999999988


Q ss_pred             HHHHhc--CCccEEEEccCC
Q psy14567         74 AAVSKV--GPVDVLINNAAV   91 (238)
Q Consensus        74 ~~~~~~--g~id~li~~ag~   91 (238)
                      +.++..  .+..+|+-+.|.
T Consensus        86 ~~~~~a~~~~~~~ViGTTG~  105 (162)
T d1diha1          86 NHLAFCRQHGKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHTTCEEEECCCCC
T ss_pred             HHHHHHHhccceeEEecCCC
Confidence            877654  457888777775

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=86.36  E-value=0.61  Score=32.02  Aligned_cols=69  Identities=10%  Similarity=0.083  Sum_probs=44.8

Q ss_pred             eCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEE
Q psy14567          7 LHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLI   86 (238)
Q Consensus         7 l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li   86 (238)
                      +.+++..|++=    |-+|+.+|++|...|++|+++..++-.  .+++....+...     +.   +++++   .-|++|
T Consensus        21 laGk~vvV~GY----G~vGrG~A~~~rg~Ga~V~V~E~DPi~--alqA~mdGf~v~-----~~---~~a~~---~aDi~v   83 (163)
T d1v8ba1          21 ISGKIVVICGY----GDVGKGCASSMKGLGARVYITEIDPIC--AIQAVMEGFNVV-----TL---DEIVD---KGDFFI   83 (163)
T ss_dssp             CTTSEEEEECC----SHHHHHHHHHHHHHTCEEEEECSCHHH--HHHHHTTTCEEC-----CH---HHHTT---TCSEEE
T ss_pred             ecCCEEEEecc----cccchhHHHHHHhCCCEEEEEecCchh--hHHHHhcCCccC-----ch---hHccc---cCcEEE
Confidence            44555555443    689999999999999999999999844  455555444332     21   22333   347777


Q ss_pred             EccCCC
Q psy14567         87 NNAAVA   92 (238)
Q Consensus        87 ~~ag~~   92 (238)
                      ...|-.
T Consensus        84 TaTGn~   89 (163)
T d1v8ba1          84 TCTGNV   89 (163)
T ss_dssp             ECCSSS
T ss_pred             EcCCCC
Confidence            777643

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=86.16  E-value=0.24  Score=35.10  Aligned_cols=34  Identities=12%  Similarity=0.142  Sum_probs=29.5

Q ss_pred             CCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhh
Q psy14567         21 KPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQA   55 (238)
Q Consensus        21 s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~   55 (238)
                      .|-+|..+|..|+ .|++|+..+.+++..+++.+.
T Consensus         8 lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~~g   41 (196)
T d1dlja2           8 SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKINNG   41 (196)
T ss_dssp             CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHHTT
T ss_pred             CChhHHHHHHHHH-CCCcEEEEECCHHHHHHHhhc
Confidence            6899999998775 699999999999998888753

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=85.98  E-value=0.57  Score=32.95  Aligned_cols=35  Identities=11%  Similarity=0.173  Sum_probs=28.2

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ   46 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~   46 (238)
                      +.++++|.| .|.||+++++.|...|++|+..+|..
T Consensus        43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          43 EAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             cccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence            455666644 56799999999999999999998754

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.10  E-value=0.26  Score=34.33  Aligned_cols=81  Identities=11%  Similarity=-0.012  Sum_probs=49.0

Q ss_pred             CCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeec--CCHHHHHHHHHhcCCccEEEE
Q psy14567         10 DRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDL--QDWARTRAAVSKVGPVDVLIN   87 (238)
Q Consensus        10 ~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~--~~~~~v~~~~~~~g~id~li~   87 (238)
                      .+.+.++|.|.|.=+|+-++..|+++|++|..+.++........+...-......|+  ..++.+++...+   .|++|.
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~---aDIvIs  103 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLD---SDVVIT  103 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHH---CSEEEE
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhcccc---CCEEEE
Confidence            455666667888999999999999999999887655321000000000011112222  335566666654   599998


Q ss_pred             ccCCCC
Q psy14567         88 NAAVAR   93 (238)
Q Consensus        88 ~ag~~~   93 (238)
                      .+|...
T Consensus       104 avG~p~  109 (171)
T d1edza1         104 GVPSEN  109 (171)
T ss_dssp             CCCCTT
T ss_pred             ccCCCc
Confidence            887644

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=85.06  E-value=0.18  Score=38.35  Aligned_cols=32  Identities=16%  Similarity=0.046  Sum_probs=26.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEec
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALS   43 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~   43 (238)
                      ..+++.|-| .|.+|.++|+.|.+.|++|+.++
T Consensus        35 ~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          35 GDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEE
Confidence            455666654 47999999999999999998876

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=84.64  E-value=0.78  Score=32.37  Aligned_cols=36  Identities=17%  Similarity=0.112  Sum_probs=28.4

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA   47 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~   47 (238)
                      +.++++|.| -|.||+.+++.+...|++|+..++...
T Consensus        46 ~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          46 DNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             cccceEEee-cccchHHHHHHHHhhcccccccccccc
Confidence            345666644 478999999999999999999887543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.02  E-value=0.4  Score=33.30  Aligned_cols=76  Identities=9%  Similarity=-0.019  Sum_probs=48.0

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.+.++|.|.|.-+|+-++..|+++|++|..+.+....+.+..++   .+++..-...++-++   ...=+.+.+|-.+|
T Consensus        38 ~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~~~~---aDivi~a~G~~~~i~---~~~vk~g~iviDvg  111 (170)
T d1a4ia1          38 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNK---GDILVVATGQPEMVK---GEWIKPGAIVIDCG  111 (170)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHTT---CSEEEECCCCTTCBC---GGGSCTTCEEEECC
T ss_pred             ccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHHHhh---ccchhhccccccccc---cccccCCCeEeccC
Confidence            445566789999999999999999999999988877666554432   233322222222111   11113566666777


Q ss_pred             CC
Q psy14567         91 VA   92 (238)
Q Consensus        91 ~~   92 (238)
                      +.
T Consensus       112 i~  113 (170)
T d1a4ia1         112 IN  113 (170)
T ss_dssp             CB
T ss_pred             cc
Confidence            65

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=83.84  E-value=0.33  Score=34.10  Aligned_cols=36  Identities=17%  Similarity=0.039  Sum_probs=28.5

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChH
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQA   47 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~   47 (238)
                      +.++++|-|. |.||+.+++.+...|++|+..+|...
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            3445555543 56999999999999999999998753

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=83.78  E-value=1.3  Score=30.80  Aligned_cols=75  Identities=13%  Similarity=0.206  Sum_probs=44.4

Q ss_pred             eeCCCCcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHhc
Q psy14567          6 KLHPDRTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSKV   79 (238)
Q Consensus         6 ~l~~~~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~   79 (238)
                      ++..+...+++=.|+.+|   .++.++++.+.+|+.++.+++.++..++..      .+++++.+|..      +.....
T Consensus        28 ~l~~~~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~------~~~~~~   98 (186)
T d1l3ia_          28 LAEPGKNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP------EALCKI   98 (186)
T ss_dssp             HHCCCTTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH------HHHTTS
T ss_pred             hcCCCCCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh------hccccc
Confidence            344444444432343333   223445666789999999988765544322      36888888752      233444


Q ss_pred             CCccEEEEcc
Q psy14567         80 GPVDVLINNA   89 (238)
Q Consensus        80 g~id~li~~a   89 (238)
                      ..+|.++.+.
T Consensus        99 ~~~D~v~~~~  108 (186)
T d1l3ia_          99 PDIDIAVVGG  108 (186)
T ss_dssp             CCEEEEEESC
T ss_pred             CCcCEEEEeC
Confidence            5789998764

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=83.57  E-value=0.45  Score=32.86  Aligned_cols=44  Identities=11%  Similarity=-0.096  Sum_probs=34.9

Q ss_pred             CcCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh
Q psy14567         11 RTNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ   54 (238)
Q Consensus        11 ~~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   54 (238)
                      ..+.+.|.|.|.-+|+-++..|.++|++|..+.+...++++..+
T Consensus        36 ~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~~~   79 (166)
T d1b0aa1          36 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVE   79 (166)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHHHH
T ss_pred             ccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHHHh
Confidence            45566678999999999999999999999988776666555443

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=82.96  E-value=0.38  Score=31.66  Aligned_cols=63  Identities=13%  Similarity=0.211  Sum_probs=45.0

Q ss_pred             HHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCC
Q psy14567         25 GRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAV   91 (238)
Q Consensus        25 G~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~   91 (238)
                      +.+.+++|.+.|++++++..|+++...-...   ..-+..+--..+++.+.++.- ++|.++...|.
T Consensus        30 ~~~a~~alke~g~~~iliN~NP~TVstd~d~---aD~lYfePlt~e~v~~Ii~~E-~pd~il~~~GG   92 (127)
T d1a9xa3          30 GAQACKALREEGYRVINVNSNPATIMTDPEM---ADATYIEPIHWEVVRKIIEKE-RPDAVLPTMGG   92 (127)
T ss_dssp             HHHHHHHHHHHTCEEEEECSCTTCGGGCGGG---SSEEECSCCCHHHHHHHHHHH-CCSEEECSSSH
T ss_pred             HHHHHHHHHHcCCeEEEecCchHhhhcChhh---cceeeeecCCHHHHHHHHHHh-CcCCeEEEeee
Confidence            4678899999999999999999875332222   223345555668888888765 68988877764

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=82.23  E-value=0.37  Score=34.97  Aligned_cols=33  Identities=12%  Similarity=-0.070  Sum_probs=26.1

Q ss_pred             cCCCCCCCCCCchHHHHHHHHhhCCCEEEEecCCh
Q psy14567         12 TNTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQ   46 (238)
Q Consensus        12 ~~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~   46 (238)
                      .+|++| | +|-.|.++|.+|+++|.+|.++.|..
T Consensus         7 ~kVvVI-G-aGiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           7 KRVVVL-G-SGVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CEEEEE-C-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CcEEEE-C-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            345544 3 36789999999999999999998853

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.98  E-value=0.59  Score=38.65  Aligned_cols=28  Identities=11%  Similarity=-0.014  Sum_probs=22.3

Q ss_pred             CCCCCCCchHHHHHHHHhhCCC-EEEEecC
Q psy14567         16 GGDYPKPGIGRCIVEKLSQHEA-IIIALSK   44 (238)
Q Consensus        16 ~itG~s~gIG~~ia~~l~~~G~-~V~~~~r   44 (238)
                      +|.|+ ||+|.++++-|+..|. ++.+++.
T Consensus        29 lvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          29 CLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             EECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             EEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            33454 7899999999999997 7888764

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=81.38  E-value=2.4  Score=31.48  Aligned_cols=70  Identities=10%  Similarity=0.155  Sum_probs=44.5

Q ss_pred             CCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHh---hC---CCceEEEeecCCHHHHHHHHHhcCCccEEEEccC
Q psy14567         17 GDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQ---AF---PNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAA   90 (238)
Q Consensus        17 itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~---~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag   90 (238)
                      +.+|+|-|+.++++   ...++|++++.++..++-..+   ..   ..+.+...|+.+.     ..+..+++|++|.|..
T Consensus       117 ~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~-----~~~~~~~fDlIVsNPP  188 (271)
T d1nv8a_         117 IGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-----FKEKFASIEMILSNPP  188 (271)
T ss_dssp             ESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-----GGGGTTTCCEEEECCC
T ss_pred             eeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc-----cccccCcccEEEEccc
Confidence            44555556666553   246799999999987653322   22   1355667777543     2233478999999998


Q ss_pred             CCCC
Q psy14567         91 VARF   94 (238)
Q Consensus        91 ~~~~   94 (238)
                      +...
T Consensus       189 YI~~  192 (271)
T d1nv8a_         189 YVKS  192 (271)
T ss_dssp             CBCG
T ss_pred             ccCc
Confidence            7753

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=81.12  E-value=2.8  Score=27.89  Aligned_cols=62  Identities=8%  Similarity=0.160  Sum_probs=39.6

Q ss_pred             CCCCchHHHHHHHHhhCCC-EEEEecCChHhHHHHHhhC------CCceEEEeecCCHHHHHHHHHh-cCCccEEEEccC
Q psy14567         19 YPKPGIGRCIVEKLSQHEA-IIIALSKTQANLDSLKQAF------PNVQTVQVDLQDWARTRAAVSK-VGPVDVLINNAA   90 (238)
Q Consensus        19 G~s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~v~~~~~~-~g~id~li~~ag   90 (238)
                      .|||.+|.+    ++.+|+ +|+.+..+++..+.+.+..      .++++++.|..+      +++. -++.|+++.+..
T Consensus        23 ~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~~~~~~fDiIf~DPP   92 (152)
T d2esra1          23 AGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AIDCLTGRFDLVFLDPP   92 (152)
T ss_dssp             CTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHHHBCSCEEEEEECCS
T ss_pred             CccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cccccccccceeEechh
Confidence            345667664    345776 8999999988765443322      237788888643      2222 257899987753

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=80.62  E-value=5.3  Score=26.69  Aligned_cols=75  Identities=17%  Similarity=0.203  Sum_probs=49.9

Q ss_pred             CCCCCCCCCCchHHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEE--Eeec---CCHHHHHHHHHhc---CCccE
Q psy14567         13 NTKGGDYPKPGIGRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTV--QVDL---QDWARTRAAVSKV---GPVDV   84 (238)
Q Consensus        13 ~v~~itG~s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~D~---~~~~~v~~~~~~~---g~id~   84 (238)
                      +.++|.+.|||.|.-++..+.+.|.++  -.-+++..+++.+..+.....  ++|+   .+.+...++++.+   ..+|.
T Consensus         4 ~rvaiit~sGG~~~l~aD~~~~~Gl~l--~~l~~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~d~~vd~   81 (163)
T d2csua3           4 NKVAIMTNAGGPGVLTADELDKRGLKL--ATLEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQDPNVDM   81 (163)
T ss_dssp             SEEEEEESCHHHHHHHHHHHHTTTCEE--CCCCHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHHSTTCSE
T ss_pred             CeEEEEECChHHHHHHHHHHHHcCCcc--CCCCHHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHcCCCcCE
Confidence            345556788999999999999999665  445667777777777643222  4555   3445556666554   56887


Q ss_pred             EEEcc
Q psy14567         85 LINNA   89 (238)
Q Consensus        85 li~~a   89 (238)
                      ++...
T Consensus        82 v~v~~   86 (163)
T d2csua3          82 LIAIC   86 (163)
T ss_dssp             EEEEE
T ss_pred             EEEee
Confidence            76544

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=80.29  E-value=3.1  Score=26.79  Aligned_cols=64  Identities=6%  Similarity=-0.100  Sum_probs=44.9

Q ss_pred             HHHHHHHHhhCCCEEEEecCChHhHHHHHhhCCCceEEEeecCCHHHHHHHHHhcCCccEEEEccCCC
Q psy14567         25 GRCIVEKLSQHEAIIIALSKTQANLDSLKQAFPNVQTVQVDLQDWARTRAAVSKVGPVDVLINNAAVA   92 (238)
Q Consensus        25 G~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~g~id~li~~ag~~   92 (238)
                      +.+.+++|.+.|++++++..|+++...-..   -..-+..+--..+.+.+.++.- ++|.++...|..
T Consensus        27 ~~~a~~aLk~~g~~~IliN~NPeTVstd~d---~aD~lYfeplt~e~v~~Ii~~E-~p~~ii~~~GGQ   90 (121)
T d1a9xa4          27 CVHASLALREDGYETIMVNCNPETVSTDYD---TSDRLYFEPVTLEDVLEIVRIE-KPKGVIVQYGGQ   90 (121)
T ss_dssp             HHHHHHHHHHTTCEEEEECCCTTSSTTSTT---SSSEEECCCCSHHHHHHHHHHH-CCSEEECSSSTH
T ss_pred             HHHHHHHHHhcCCeEEEEecChhhhhcChh---hcCceEEccCCHHHHHHHHHHh-CCCEEEeehhhh
Confidence            567889999999999999999987532211   2233445555678888887655 578888777653