Psyllid ID: psy14717

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-----
Protein Sequence
MDSISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHcccccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccEEEEEEEEEEEccEEEEEEEccccccHHHHHHHccccccccEEEEccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccccHHHHHHcHHHHHHHHccccEEEEEEEEEEccccEEEEEEEcccccHHHHHHHcccccHHHHHHHEcc
Coil and Loop (DISEMBL)
mdsisgsgsnvprpmAIFELLDYivnepppklpagiftdSFRDFVDRCLkknpseradlktlSATTILKVLHECNFAHIVGFygafisdqdISICMEYMDGGSLDLILKKagkipehilgtitsa
Flexible Loop (DISEMBL)
mdsisgsgsnvprPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKknpseradlktlSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKagkipehilgtitsa
Low Complexity Region (SEG)
MDSISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA
Disordered region (IsUnstruct)
**************MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKN***RADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGT****
Disordered Region (DISOPRED)
M*******SNVPRPMAIFELLDYIV***********FTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA
Disordered Region (DISEMBL)
*********NVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA
Disordered Region (DISPRO)
**********VPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MDSISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	125	2.2.26 [Sep-21-2011]
Q24324	396	Dual specificity mitogen-	yes	N/A	0.464	0.146	0.844	1e-22
Q1HG70	400	Dual specificity mitogen-	yes	N/A	0.592	0.185	0.605	1e-19
Q05116	395	Dual specificity mitogen-	N/A	N/A	0.448	0.141	0.741	2e-19
Q91447	388	Dual specificity mitogen-	N/A	N/A	0.448	0.144	0.724	2e-19
Q01986	393	Dual specificity mitogen-	yes	N/A	0.448	0.142	0.724	3e-19
Q9XT09	393	Dual specificity mitogen-	yes	N/A	0.448	0.142	0.724	3e-19
P29678	393	Dual specificity mitogen-	yes	N/A	0.448	0.142	0.724	3e-19
Q02750	393	Dual specificity mitogen-	yes	N/A	0.448	0.142	0.724	3e-19
P31938	393	Dual specificity mitogen-	yes	N/A	0.448	0.142	0.724	3e-19
P36507	400	Dual specificity mitogen-	no	N/A	0.592	0.185	0.592	7e-19

>sp|Q24324|DSOR1_DROME Dual specificity mitogen-activated protein kinase kinase dSOR1 OS=Drosophila melanogaster GN=Dsor1 PE=2 SV=2

 Score =  105 bits (261), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 49/58 (84%), Positives = 52/58 (89%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           LKVLHECNF HIVGFYGAF SD +ISICMEYMDGGSLDLILK+AG+IPE ILG IT A
Sbjct: 134 LKVLHECNFPHIVGFYGAFYSDGEISICMEYMDGGSLDLILKRAGRIPESILGRITLA 191

Required downstream of Raf in the sevenless (sev), torso (tor), and Drosophila EGF receptor homolog (DER) signal transduction pathways. Involved in both positive regulation (at the posterior terminus) and negative regulation (at the anterior domain) of tll, as in other terminal class gene products, maybe via the ERK-A kinase.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 1EC: 2EC: .EC: 2

>sp|Q1HG70|MP2K2_CANFA Dual specificity mitogen-activated protein kinase kinase 2 OS=Canis familiaris GN=MAP2K2 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/76 (60%), Positives = 58/76 (76%), Gaps = 2/76 (2%)

Query: 4   ISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLS 63
           ISG G++    MAIFELLDYIVNEPPPKLP G+FT  F++FV++CL KNP+ERADLK L 
Sbjct: 305 ISGHGTDSRPAMAIFELLDYIVNEPPPKLPNGVFTQDFQEFVNKCLIKNPAERADLKMLM 364

Query: 64  ATTILKV--LHECNFA 77
           + T +K   + E +FA
Sbjct: 365 SHTFIKRSEVEEVDFA 380

Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in a Thr-Glu-Tyr sequence located in MAP kinases. Activates the ERK1 and ERK2 MAP kinases.

Canis familiaris (taxid: 9615)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|Q05116|MP2K1_XENLA Dual specificity mitogen-activated protein kinase kinase 1 OS=Xenopus laevis GN=map2k1 PE=1 SV=2

 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/58 (74%), Positives = 50/58 (86%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAGKIPE ILG ++ A
Sbjct: 115 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGKIPEKILGKVSIA 172

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Binding of extracellular ligands such as growth factors, cytokines and hormones to their cell-surface receptors activates the MAPK/ERK cascade, ultimately leading to phosphorylation of a threonine and a tyrosine residue in a Thr-Glu-Tyr sequence located in MAP kinases. Depending on the cellular context, this pathway mediates diverse biological functions such as cell growth, adhesion, survival and differentiation predominantly through the regulation of transcription, metabolism and cytoskeletal rearrangements.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|Q91447|MP2K1_SERCA Dual specificity mitogen-activated protein kinase kinase 1 (Fragment) OS=Serinus canaria GN=MAP2K1 PE=2 SV=1

 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 108 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 165

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Binding of extracellular ligands such as growth factors, cytokines and hormones to their cell-surface receptors activates RAS and this initiates RAF1 activation. RAF1 then further activates the dual-specificity protein kinases MAP2K1/MEK1 and MAP2K2/MEK2. Both MAP2K1/MEK1 and MAP2K2/MEK2 function specifically in the MAPK/ERK cascade, and catalyze the concomitant phosphorylation of a threonine and a tyrosine residue in a Thr-Glu-Tyr sequence located in the extracellular signal-regulated kinases MAPK3/ERK1 and MAPK1/ERK2, leading to their activation and further transduction of the signal within the MAPK/ERK cascade. Depending on the cellular context, this pathway mediates diverse biological functions such as cell growth, adhesion, survival and differentiation predominantly through the regulation of transcription, metabolism and cytoskeletal rearrangements.

Serinus canaria (taxid: 9135)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|Q01986|MP2K1_RAT Dual specificity mitogen-activated protein kinase kinase 1 OS=Rattus norvegicus GN=Map2k1 PE=1 SV=2

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 115 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 172

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Binding of extracellular ligands such as growth factors, cytokines and hormones to their cell-surface receptors activates RAS and this initiates RAF1 activation. RAF1 then further activates the dual-specificity protein kinases MAP2K1/MEK1 and MAP2K2/MEK2. Both MAP2K1/MEK1 and MAP2K2/MEK2 function specifically in the MAPK/ERK cascade, and catalyze the concomitant phosphorylation of a threonine and a tyrosine residue in a Thr-Glu-Tyr sequence located in the extracellular signal-regulated kinases MAPK3/ERK1 and MAPK1/ERK2, leading to their activation and further transduction of the signal within the MAPK/ERK cascade. Depending on the cellular context, this pathway mediates diverse biological functions such as cell growth, adhesion, survival and differentiation, predominantly through the regulation of transcription, metabolism and cytoskeletal rearrangements. One target of the MAPK/ERK cascade is peroxisome proliferator-activated receptor gamma (PPARG), a nuclear receptor that promotes differentiation and apoptosis. MAP2K1/MEK1 has been shown to export PPARG from the nucleus. The MAPK/ERK cascade is also involved in the regulation of endosomal dynamics, including lysosome processing and endosome cycling through the perinuclear recycling compartment (PNRC), as well as in the fragmentation of the Golgi apparatus during mitosis.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|Q9XT09|MP2K1_PANTR Dual specificity mitogen-activated protein kinase kinase 1 OS=Pan troglodytes GN=MAP2K1 PE=2 SV=3

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 115 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 172

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Binding of extracellular ligands such as growth factors, cytokines and hormones to their cell-surface receptors activates RAS and this initiates RAF1 activation. RAF1 then further activates the dual-specificity protein kinases MAP2K1/MEK1 and MAP2K2/MEK2. Both MAP2K1/MEK1 and MAP2K2/MEK2 function specifically in the MAPK/ERK cascade, and catalyze the concomitant phosphorylation of a threonine and a tyrosine residue in a Thr-Glu-Tyr sequence located in the extracellular signal-regulated kinases MAPK3/ERK1 and MAPK1/ERK2, leading to their activation and further transduction of the signal within the MAPK/ERK cascade. Depending on the cellular context, this pathway mediates diverse biological functions such as cell growth, adhesion, survival and differentiation, predominantly through the regulation of transcription, metabolism and cytoskeletal rearrangements. One target of the MAPK/ERK cascade is peroxisome proliferator-activated receptor gamma (PPARG), a nuclear receptor that promotes differentiation and apoptosis. MAP2K1/MEK1 has been shown to export PPARG from the nucleus. The MAPK/ERK cascade is also involved in the regulation of endosomal dynamics, including lysosome processing and endosome cycling through the perinuclear recycling compartment (PNRC), as well as in the fragmentation of the Golgi apparatus during mitosis.

Pan troglodytes (taxid: 9598)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|P29678|MP2K1_RABIT Dual specificity mitogen-activated protein kinase kinase 1 OS=Oryctolagus cuniculus GN=MAP2K1 PE=1 SV=2

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 115 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 172

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Binding of extracellular ligands such as growth factors, cytokines and hormones to their cell-surface receptors activates RAS and this initiates RAF1 activation. RAF1 then further activates the dual-specificity protein kinases MAP2K1/MEK1 and MAP2K2/MEK2. Both MAP2K1/MEK1 and MAP2K2/MEK2 function specifically in the MAPK/ERK cascade, and catalyze the concomitant phosphorylation of a threonine and a tyrosine residue in a Thr-Glu-Tyr sequence located in the extracellular signal-regulated kinases MAPK3/ERK1 and MAPK1/ERK2, leading to their activation and further transduction of the signal within the MAPK/ERK cascade. Depending on the cellular context, this pathway mediates diverse biological functions such as cell growth, adhesion, survival and differentiation, predominantly through the regulation of transcription, metabolism and cytoskeletal rearrangements. One target of the MAPK/ERK cascade is peroxisome proliferator-activated receptor gamma (PPARG), a nuclear receptor that promotes differentiation and apoptosis. MAP2K1/MEK1 has been shown to export PPARG from the nucleus. The MAPK/ERK cascade is also involved in the regulation of endosomal dynamics, including lysosome processing and endosome cycling through the perinuclear recycling compartment (PNRC), as well as in the fragmentation of the Golgi apparatus during mitosis.

Oryctolagus cuniculus (taxid: 9986)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|Q02750|MP2K1_HUMAN Dual specificity mitogen-activated protein kinase kinase 1 OS=Homo sapiens GN=MAP2K1 PE=1 SV=2

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 115 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 172

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Binding of extracellular ligands such as growth factors, cytokines and hormones to their cell-surface receptors activates RAS and this initiates RAF1 activation. RAF1 then further activates the dual-specificity protein kinases MAP2K1/MEK1 and MAP2K2/MEK2. Both MAP2K1/MEK1 and MAP2K2/MEK2 function specifically in the MAPK/ERK cascade, and catalyze the concomitant phosphorylation of a threonine and a tyrosine residue in a Thr-Glu-Tyr sequence located in the extracellular signal-regulated kinases MAPK3/ERK1 and MAPK1/ERK2, leading to their activation and further transduction of the signal within the MAPK/ERK cascade. Depending on the cellular context, this pathway mediates diverse biological functions such as cell growth, adhesion, survival and differentiation, predominantly through the regulation of transcription, metabolism and cytoskeletal rearrangements. One target of the MAPK/ERK cascade is peroxisome proliferator-activated receptor gamma (PPARG), a nuclear receptor that promotes differentiation and apoptosis. MAP2K1/MEK1 has been shown to export PPARG from the nucleus. The MAPK/ERK cascade is also involved in the regulation of endosomal dynamics, including lysosome processing and endosome cycling through the perinuclear recycling compartment (PNRC), as well as in the fragmentation of the Golgi apparatus during mitosis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|P31938|MP2K1_MOUSE Dual specificity mitogen-activated protein kinase kinase 1 OS=Mus musculus GN=Map2k1 PE=1 SV=2

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 115 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 172

Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway. Binding of extracellular ligands such as growth factors, cytokines and hormones to their cell-surface receptors activates RAS and this initiates RAF1 activation. RAF1 then further activates the dual-specificity protein kinases MAP2K1/MEK1 and MAP2K2/MEK2. Both MAP2K1/MEK1 and MAP2K2/MEK2 function specifically in the MAPK/ERK cascade, and catalyze the concomitant phosphorylation of a threonine and a tyrosine residue in a Thr-Glu-Tyr sequence located in the extracellular signal-regulated kinases MAPK3/ERK1 and MAPK1/ERK2, leading to their activation and further transduction of the signal within the MAPK/ERK cascade. Depending on the cellular context, this pathway mediates diverse biological functions such as cell growth, adhesion, survival and differentiation, predominantly through the regulation of transcription, metabolism and cytoskeletal rearrangements. One target of the MAPK/ERK cascade is peroxisome proliferator-activated receptor gamma (PPARG), a nuclear receptor that promotes differentiation and apoptosis. MAP2K1/MEK1 has been shown to export PPARG from the nucleus. The MAPK/ERK cascade is also involved in the regulation of endosomal dynamics, including lysosome processing and endosome cycling through the perinuclear recycling compartment (PNRC), as well as in the fragmentation of the Golgi apparatus during mitosis.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

>sp|P36507|MP2K2_HUMAN Dual specificity mitogen-activated protein kinase kinase 2 OS=Homo sapiens GN=MAP2K2 PE=1 SV=1

 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 45/76 (59%), Positives = 57/76 (75%), Gaps = 2/76 (2%)

Query: 4   ISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLS 63
           +SG G +    MAIFELLDYIVNEPPPKLP G+FT  F++FV++CL KNP+ERADLK L+
Sbjct: 305 VSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLT 364

Query: 64  ATTILKV--LHECNFA 77
             T +K   + E +FA
Sbjct: 365 NHTFIKRSEVEEVDFA 380

Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in a Thr-Glu-Tyr sequence located in MAP kinases. Activates the ERK1 and ERK2 MAP kinases.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
112982906	404	MAP kinse-ERK kinase [Bombyx mori] gi|77	0.464	0.143	0.913	1e-23
357627030	400	MAP kinse-ERK kinase [Danaus plexippus]	0.456	0.142	0.913	2e-23
307189524	194	Dual specificity mitogen-activated prote	0.464	0.298	0.913	3e-23
242017000	400	mitogen-activated protein kinase ERK-A,	0.464	0.145	0.896	1e-22
308512739	97	MAP kinase-ERK kinase [Biston betularia]	0.464	0.597	0.896	1e-22
340720584	415	PREDICTED: dual specificity mitogen-acti	0.464	0.139	0.896	1e-22
350401186	415	PREDICTED: dual specificity mitogen-acti	0.464	0.139	0.896	1e-22
48138650	209	PREDICTED: dual specificity mitogen-acti	0.456	0.272	0.859	5e-22
195043794	398	GH12793 [Drosophila grimshawi] gi|193901	0.464	0.145	0.862	7e-22
380027769	209	PREDICTED: dual specificity mitogen-acti	0.456	0.272	0.842	1e-21

>gi|112982906|ref|NP_001036922.1| MAP kinse-ERK kinase [Bombyx mori] gi|77799294|dbj|BAE46742.1| MAP kinse-ERK kinase [Bombyx mori]

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/58 (91%), Positives = 55/58 (94%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           LKVLHECNFAHIVGFYGAF SD +ISICMEYMDGGSLDLILKKAG+IPE ILGTITSA
Sbjct: 138 LKVLHECNFAHIVGFYGAFYSDGEISICMEYMDGGSLDLILKKAGRIPESILGTITSA 195

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357627030|gb|EHJ76872.1| MAP kinse-ERK kinase [Danaus plexippus]

 Score =  112 bits (281), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 53/58 (91%), Positives = 55/58 (94%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           LKVLHECNFAHIVGFYGAF SD +ISICMEYMDGGSLDLILKKAG+IPE ILGTITSA
Sbjct: 134 LKVLHECNFAHIVGFYGAFYSDGEISICMEYMDGGSLDLILKKAGRIPESILGTITSA 191

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307189524|gb|EFN73901.1| Dual specificity mitogen-activated protein kinase kinase dSOR1 [Camponotus floridanus]

 Score =  112 bits (280), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 53/58 (91%), Positives = 55/58 (94%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           LKVLHECNFAHIVGFYGAF SD +ISICMEYMDGGSLDLILKKAG+IPE ILGTITSA
Sbjct: 133 LKVLHECNFAHIVGFYGAFYSDGEISICMEYMDGGSLDLILKKAGRIPESILGTITSA 190

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242017000|ref|XP_002428982.1| mitogen-activated protein kinase ERK-A, putative [Pediculus humanus corporis] gi|212513815|gb|EEB16244.1| mitogen-activated protein kinase ERK-A, putative [Pediculus humanus corporis]

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/58 (89%), Positives = 54/58 (93%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           LKVLHECNFAHIVGFYGAF SD +ISICMEYMDGGSLDLILKKAG+IPE ILG ITSA
Sbjct: 136 LKVLHECNFAHIVGFYGAFYSDGEISICMEYMDGGSLDLILKKAGRIPEDILGKITSA 193

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|308512739|gb|ADO33023.1| MAP kinase-ERK kinase [Biston betularia]

 Score =  110 bits (275), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/58 (89%), Positives = 54/58 (93%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           LKVLHECNF HIVGFYGAF SD +ISICMEYMDGGSLDLILKKAG+IPE ILGTITSA
Sbjct: 10  LKVLHECNFTHIVGFYGAFYSDGEISICMEYMDGGSLDLILKKAGRIPESILGTITSA 67

Source: Biston betularia

Species: Biston betularia

Genus: Biston

Family: Geometridae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340720584|ref|XP_003398714.1| PREDICTED: dual specificity mitogen-activated protein kinase kinase dSOR1-like [Bombus terrestris]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/58 (89%), Positives = 54/58 (93%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           LKVLHECNFAHIVGFYGAF SD +ISICMEYMDGGSLDLILKKAG+IPE IL TITSA
Sbjct: 134 LKVLHECNFAHIVGFYGAFYSDGEISICMEYMDGGSLDLILKKAGRIPEPILSTITSA 191

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350401186|ref|XP_003486077.1| PREDICTED: dual specificity mitogen-activated protein kinase kinase dSOR1-like [Bombus impatiens]

 Score =  110 bits (274), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 52/58 (89%), Positives = 54/58 (93%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           LKVLHECNFAHIVGFYGAF SD +ISICMEYMDGGSLDLILKKAG+IPE IL TITSA
Sbjct: 134 LKVLHECNFAHIVGFYGAFYSDGEISICMEYMDGGSLDLILKKAGRIPEPILSTITSA 191

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|48138650|ref|XP_393416.1| PREDICTED: dual specificity mitogen-activated protein kinase kinase dSOR1 [Apis mellifera]

 Score =  108 bits (270), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 49/57 (85%), Positives = 52/57 (91%)

Query: 6   GSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
           G  +  PRPMAIFELLDYIVNEPPPKLPAGIF+D+F DFVDRCLKKNPSERADLKTL
Sbjct: 114 GHNTGSPRPMAIFELLDYIVNEPPPKLPAGIFSDAFTDFVDRCLKKNPSERADLKTL 170

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195043794|ref|XP_001991691.1| GH12793 [Drosophila grimshawi] gi|193901449|gb|EDW00316.1| GH12793 [Drosophila grimshawi]

 Score =  107 bits (268), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 50/58 (86%), Positives = 53/58 (91%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           LKVLHECNFAHIVGFYGAF SD +ISICMEYMDGGSLDLILK+AG+IPE ILG IT A
Sbjct: 135 LKVLHECNFAHIVGFYGAFYSDGEISICMEYMDGGSLDLILKRAGRIPESILGRITLA 192

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380027769|ref|XP_003697591.1| PREDICTED: dual specificity mitogen-activated protein kinase kinase 2-like [Apis florea]

 Score =  107 bits (267), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 48/57 (84%), Positives = 52/57 (91%)

Query: 6   GSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
           G  +  PRPMAIFELLDYIVNEPPPKLPAGIF+D+F DFVDRCLKKNP+ERADLKTL
Sbjct: 114 GHNTGSPRPMAIFELLDYIVNEPPPKLPAGIFSDAFTDFVDRCLKKNPAERADLKTL 170

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
FB|FBgn0010269	396	Dsor1 "Downstream of raf1" [Dr	0.464	0.146	0.844	1.1e-21
UNIPROTKB|Q1HG70	400	MAP2K2 "Dual specificity mitog	0.592	0.185	0.605	1.1e-18
UNIPROTKB|G5E9C7	303	MAP2K2 "Mitogen-activated prot	0.592	0.244	0.592	1.4e-18
UNIPROTKB|K7GPS0	358	MAP2K2 "Uncharacterized protei	0.592	0.206	0.605	2.2e-18
UNIPROTKB|F1PJI7	380	MAP2K1 "Uncharacterized protei	0.464	0.152	0.724	3.1e-18
UNIPROTKB|Q0VD16	393	MAP2K1 "MAP2K1 protein" [Bos t	0.464	0.147	0.724	3.6e-18
UNIPROTKB|J9P5W6	393	MAP2K1 "Uncharacterized protei	0.464	0.147	0.724	3.6e-18
UNIPROTKB|Q02750	393	MAP2K1 "Dual specificity mitog	0.464	0.147	0.724	3.6e-18
MGI|MGI:1346866	393	Map2k1 "mitogen-activated prot	0.464	0.147	0.724	3.6e-18
RGD|70495	393	Map2k1 "mitogen activated prot	0.464	0.147	0.724	3.6e-18

FB|FBgn0010269 Dsor1 "Downstream of raf1" [Drosophila melanogaster (taxid:7227)]

 Score = 255 (94.8 bits), Expect = 1.1e-21, P = 1.1e-21
 Identities = 49/58 (84%), Positives = 52/58 (89%)

Query:    68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
             LKVLHECNF HIVGFYGAF SD +ISICMEYMDGGSLDLILK+AG+IPE ILG IT A
Sbjct:   134 LKVLHECNFPHIVGFYGAFYSDGEISICMEYMDGGSLDLILKRAGRIPESILGRITLA 191

GO:0007165 "signal transduction" evidence=IGI;IMP

GO:0004708 "MAP kinase kinase activity" evidence=ISS;NAS;TAS

GO:0008595 "anterior/posterior axis specification, embryo" evidence=TAS

GO:0008592 "regulation of Toll signaling pathway" evidence=NAS

GO:0008293 "torso signaling pathway" evidence=NAS

GO:0007173 "epidermal growth factor receptor signaling pathway" evidence=NAS

GO:0045500 "sevenless signaling pathway" evidence=NAS

GO:0004707 "MAP kinase activity" evidence=NAS

GO:0007362 "terminal region determination" evidence=IMP

GO:0000165 "MAPK cascade" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=IEA;NAS;TAS

GO:0004702 "receptor signaling protein serine/threonine kinase activity" evidence=NAS

GO:0042386 "hemocyte differentiation" evidence=IGI

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007298 "border follicle cell migration" evidence=IGI

UNIPROTKB|Q1HG70 MAP2K2 "Dual specificity mitogen-activated protein kinase kinase 2" [Canis lupus familiaris (taxid:9615)]

 Score = 229 (85.7 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 46/76 (60%), Positives = 58/76 (76%)

Query:     4 ISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLS 63
             ISG G++    MAIFELLDYIVNEPPPKLP G+FT  F++FV++CL KNP+ERADLK L 
Sbjct:   305 ISGHGTDSRPAMAIFELLDYIVNEPPPKLPNGVFTQDFQEFVNKCLIKNPAERADLKMLM 364

Query:    64 ATTILK--VLHECNFA 77
             + T +K   + E +FA
Sbjct:   365 SHTFIKRSEVEEVDFA 380

GO:2000147 "positive regulation of cell motility" evidence=IEA

GO:0097110 "scaffold protein binding" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0043539 "protein serine/threonine kinase activator activity" evidence=IEA

GO:0036289 "peptidyl-serine autophosphorylation" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:0030165 "PDZ domain binding" evidence=IEA

GO:0009898 "internal side of plasma membrane" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005874 "microtubule" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|G5E9C7 MAP2K2 "Mitogen-activated protein kinase kinase 2, isoform CRA_b" [Homo sapiens (taxid:9606)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 45/76 (59%), Positives = 57/76 (75%)

Query:     4 ISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLS 63
             +SG G +    MAIFELLDYIVNEPPPKLP G+FT  F++FV++CL KNP+ERADLK L+
Sbjct:   208 VSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLT 267

Query:    64 ATTILK--VLHECNFA 77
               T +K   + E +FA
Sbjct:   268 NHTFIKRSEVEEVDFA 283

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005938 "cell cortex" evidence=IEA

GO:0032947 "protein complex scaffold" evidence=IEA

GO:2000147 "positive regulation of cell motility" evidence=IEA

UNIPROTKB|K7GPS0 MAP2K2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 224 (83.9 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 46/76 (60%), Positives = 56/76 (73%)

Query:     4 ISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLS 63
             ISG G +    MAIFELLDYIVNEPPPKLP G+FT  F++FV++CL KNP+ERADLK L 
Sbjct:   263 ISGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTQDFQEFVNKCLIKNPAERADLKMLM 322

Query:    64 ATTILK--VLHECNFA 77
               T +K   + E +FA
Sbjct:   323 NHTFIKRSEVEEVDFA 338

GO:0005524 "ATP binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

UNIPROTKB|F1PJI7 MAP2K1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 224 (83.9 bits), Expect = 3.1e-18, P = 3.1e-18
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query:    68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
             L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct:   115 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 172

GO:0090398 "cellular senescence" evidence=IEA

GO:0060711 "labyrinthine layer development" evidence=IEA

GO:0060674 "placenta blood vessel development" evidence=IEA

GO:0048870 "cell motility" evidence=IEA

GO:0045597 "positive regulation of cell differentiation" evidence=IEA

GO:0043539 "protein serine/threonine kinase activator activity" evidence=IEA

GO:0030216 "keratinocyte differentiation" evidence=IEA

GO:0030182 "neuron differentiation" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0007050 "cell cycle arrest" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004728 "receptor signaling protein tyrosine phosphatase activity" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q0VD16 MAP2K1 "MAP2K1 protein" [Bos taurus (taxid:9913)]

 Score = 224 (83.9 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query:    68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
             L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct:   115 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 172

GO:0090398 "cellular senescence" evidence=IEA

GO:0060711 "labyrinthine layer development" evidence=IEA

GO:0060674 "placenta blood vessel development" evidence=IEA

GO:0048870 "cell motility" evidence=IEA

GO:0045597 "positive regulation of cell differentiation" evidence=IEA

GO:0043539 "protein serine/threonine kinase activator activity" evidence=IEA

GO:0030216 "keratinocyte differentiation" evidence=IEA

GO:0030182 "neuron differentiation" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0007050 "cell cycle arrest" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0004728 "receptor signaling protein tyrosine phosphatase activity" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|J9P5W6 MAP2K1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 224 (83.9 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query:    68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
             L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct:   115 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 172

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q02750 MAP2K1 "Dual specificity mitogen-activated protein kinase kinase 1" [Homo sapiens (taxid:9606)]

 Score = 224 (83.9 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query:    68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
             L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct:   115 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 172

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0003056 "regulation of vascular smooth muscle contraction" evidence=IEA

GO:0004728 "receptor signaling protein tyrosine phosphatase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005938 "cell cortex" evidence=IEA

GO:0006979 "response to oxidative stress" evidence=IEA

GO:0007067 "mitosis" evidence=IEA

GO:0008283 "cell proliferation" evidence=IEA

GO:0017016 "Ras GTPase binding" evidence=IEA

GO:0030216 "keratinocyte differentiation" evidence=IEA

GO:0030335 "positive regulation of cell migration" evidence=IEA

GO:0031435 "mitogen-activated protein kinase kinase kinase binding" evidence=IEA

GO:0032320 "positive regulation of Ras GTPase activity" evidence=IEA

GO:0032402 "melanosome transport" evidence=IEA

GO:0032839 "dendrite cytoplasm" evidence=IEA

GO:0032968 "positive regulation of transcription elongation from RNA polymerase II promoter" evidence=IEA

GO:0033267 "axon part" evidence=IEA

GO:0034111 "negative regulation of homotypic cell-cell adhesion" evidence=IEA

GO:0043204 "perikaryon" evidence=IEA

GO:0045597 "positive regulation of cell differentiation" evidence=IEA

GO:0046579 "positive regulation of Ras protein signal transduction" evidence=IEA

GO:0047496 "vesicle transport along microtubule" evidence=IEA

GO:0048313 "Golgi inheritance" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0048678 "response to axon injury" evidence=IEA

GO:0048870 "cell motility" evidence=IEA

GO:0051291 "protein heterooligomerization" evidence=IEA

GO:0051384 "response to glucocorticoid stimulus" evidence=IEA

GO:0060674 "placenta blood vessel development" evidence=IEA

GO:0060711 "labyrinthine layer development" evidence=IEA

GO:0005816 "spindle pole body" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005829 "cytosol" evidence=TAS

GO:0005634 "nucleus" evidence=TAS

GO:0000187 "activation of MAPK activity" evidence=TAS

GO:0032872 "regulation of stress-activated MAPK cascade" evidence=TAS

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=TAS

GO:0005769 "early endosome" evidence=TAS

GO:0005770 "late endosome" evidence=TAS

GO:2000641 "regulation of early endosome to late endosome transport" evidence=TAS

GO:0005794 "Golgi apparatus" evidence=TAS

GO:0090170 "regulation of Golgi inheritance" evidence=TAS

GO:0005739 "mitochondrion" evidence=TAS

GO:0005925 "focal adhesion" evidence=TAS

GO:0071902 "positive regulation of protein serine/threonine kinase activity" evidence=IDA

GO:0004708 "MAP kinase kinase activity" evidence=IDA

GO:0043539 "protein serine/threonine kinase activator activity" evidence=IDA

GO:0004672 "protein kinase activity" evidence=TAS

GO:0006928 "cellular component movement" evidence=TAS

GO:0006935 "chemotaxis" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0000165 "MAPK cascade" evidence=TAS

GO:0000186 "activation of MAPKK activity" evidence=TAS

GO:0002224 "toll-like receptor signaling pathway" evidence=TAS

GO:0002755 "MyD88-dependent toll-like receptor signaling pathway" evidence=TAS

GO:0002756 "MyD88-independent toll-like receptor signaling pathway" evidence=TAS

GO:0004674 "protein serine/threonine kinase activity" evidence=TAS

GO:0007173 "epidermal growth factor receptor signaling pathway" evidence=TAS

GO:0007264 "small GTPase mediated signal transduction" evidence=TAS

GO:0007265 "Ras protein signal transduction" evidence=TAS

GO:0007411 "axon guidance" evidence=TAS

GO:0008063 "Toll signaling pathway" evidence=TAS

GO:0008286 "insulin receptor signaling pathway" evidence=TAS

GO:0008543 "fibroblast growth factor receptor signaling pathway" evidence=TAS

GO:0034130 "toll-like receptor 1 signaling pathway" evidence=TAS

GO:0034134 "toll-like receptor 2 signaling pathway" evidence=TAS

GO:0034138 "toll-like receptor 3 signaling pathway" evidence=TAS

GO:0034142 "toll-like receptor 4 signaling pathway" evidence=TAS

GO:0035666 "TRIF-dependent toll-like receptor signaling pathway" evidence=TAS

GO:0045087 "innate immune response" evidence=TAS

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=TAS

GO:0051403 "stress-activated MAPK cascade" evidence=TAS

GO:0007050 "cell cycle arrest" evidence=IMP

GO:0008285 "negative regulation of cell proliferation" evidence=IDA

GO:0090398 "cellular senescence" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

MGI|MGI:1346866 Map2k1 "mitogen-activated protein kinase kinase 1" [Mus musculus (taxid:10090)]

 Score = 224 (83.9 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query:    68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
             L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct:   115 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 172

GO:0000165 "MAPK cascade" evidence=ISO

GO:0000166 "nucleotide binding" evidence=IEA

GO:0000187 "activation of MAPK activity" evidence=ISO;IMP;TAS

GO:0003056 "regulation of vascular smooth muscle contraction" evidence=ISO

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=ISO;IMP

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=TAS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004728 "receptor signaling protein tyrosine phosphatase activity" evidence=IMP

GO:0005524 "ATP binding" evidence=ISO

GO:0005634 "nucleus" evidence=TAS

GO:0005737 "cytoplasm" evidence=IEA

GO:0005739 "mitochondrion" evidence=TAS

GO:0005769 "early endosome" evidence=TAS

GO:0005770 "late endosome" evidence=TAS

GO:0005794 "Golgi apparatus" evidence=ISO;TAS

GO:0005829 "cytosol" evidence=ISO;TAS

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005874 "microtubule" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0005925 "focal adhesion" evidence=TAS

GO:0005938 "cell cortex" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;IMP

GO:0006979 "response to oxidative stress" evidence=ISO

GO:0007050 "cell cycle arrest" evidence=ISO

GO:0007067 "mitosis" evidence=ISO

GO:0008283 "cell proliferation" evidence=ISO

GO:0008285 "negative regulation of cell proliferation" evidence=ISO

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0017016 "Ras GTPase binding" evidence=ISO

GO:0019901 "protein kinase binding" evidence=ISO

GO:0030182 "neuron differentiation" evidence=ISO;IMP

GO:0030216 "keratinocyte differentiation" evidence=IMP

GO:0030335 "positive regulation of cell migration" evidence=ISO

GO:0030425 "dendrite" evidence=ISO

GO:0031435 "mitogen-activated protein kinase kinase kinase binding" evidence=ISO

GO:0032320 "positive regulation of Ras GTPase activity" evidence=ISO

GO:0032402 "melanosome transport" evidence=ISO

GO:0032839 "dendrite cytoplasm" evidence=ISO

GO:0032872 "regulation of stress-activated MAPK cascade" evidence=TAS

GO:0032968 "positive regulation of transcription elongation from RNA polymerase II promoter" evidence=ISO

GO:0033267 "axon part" evidence=ISO

GO:0034111 "negative regulation of homotypic cell-cell adhesion" evidence=ISO

GO:0043204 "perikaryon" evidence=ISO

GO:0043539 "protein serine/threonine kinase activator activity" evidence=ISO

GO:0045597 "positive regulation of cell differentiation" evidence=IDA

GO:0046579 "positive regulation of Ras protein signal transduction" evidence=ISO

GO:0047496 "vesicle transport along microtubule" evidence=ISO

GO:0048313 "Golgi inheritance" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

GO:0048678 "response to axon injury" evidence=ISO

GO:0048812 "neuron projection morphogenesis" evidence=ISO

GO:0048870 "cell motility" evidence=IMP

GO:0051291 "protein heterooligomerization" evidence=ISO

GO:0051384 "response to glucocorticoid stimulus" evidence=ISO

GO:0060674 "placenta blood vessel development" evidence=IMP

GO:0060711 "labyrinthine layer development" evidence=IMP

GO:0071902 "positive regulation of protein serine/threonine kinase activity" evidence=ISO

GO:0090170 "regulation of Golgi inheritance" evidence=TAS

GO:0090398 "cellular senescence" evidence=ISO

GO:2000641 "regulation of early endosome to late endosome transport" evidence=TAS

RGD|70495 Map2k1 "mitogen activated protein kinase kinase 1" [Rattus norvegicus (taxid:10116)]

 Score = 224 (83.9 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query:    68 LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
             L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct:   115 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 172

GO:0000165 "MAPK cascade" evidence=IMP

GO:0000187 "activation of MAPK activity" evidence=ISO;IDA;TAS

GO:0003056 "regulation of vascular smooth muscle contraction" evidence=IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004708 "MAP kinase kinase activity" evidence=ISO;IMP;IDA;TAS

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=TAS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004728 "receptor signaling protein tyrosine phosphatase activity" evidence=IEA;ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IDA

GO:0005634 "nucleus" evidence=TAS

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=TAS

GO:0005769 "early endosome" evidence=TAS

GO:0005770 "late endosome" evidence=TAS

GO:0005794 "Golgi apparatus" evidence=IDA;TAS

GO:0005816 "spindle pole body" evidence=IEA

GO:0005829 "cytosol" evidence=IDA;TAS

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0005925 "focal adhesion" evidence=TAS

GO:0005938 "cell cortex" evidence=IDA

GO:0006468 "protein phosphorylation" evidence=ISO;IDA;TAS

GO:0006979 "response to oxidative stress" evidence=IDA

GO:0007050 "cell cycle arrest" evidence=IEA;ISO

GO:0007067 "mitosis" evidence=IDA

GO:0007243 "intracellular protein kinase cascade" evidence=TAS

GO:0008283 "cell proliferation" evidence=IDA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA;ISO

GO:0017016 "Ras GTPase binding" evidence=IPI

GO:0019901 "protein kinase binding" evidence=IPI

GO:0030182 "neuron differentiation" evidence=ISO;IMP

GO:0030216 "keratinocyte differentiation" evidence=IEA;ISO

GO:0030335 "positive regulation of cell migration" evidence=IMP

GO:0030425 "dendrite" evidence=IDA

GO:0031435 "mitogen-activated protein kinase kinase kinase binding" evidence=IDA;IPI

GO:0032320 "positive regulation of Ras GTPase activity" evidence=IMP

GO:0032402 "melanosome transport" evidence=IDA

GO:0032839 "dendrite cytoplasm" evidence=IDA

GO:0032872 "regulation of stress-activated MAPK cascade" evidence=TAS

GO:0032968 "positive regulation of transcription elongation from RNA polymerase II promoter" evidence=IMP

GO:0033267 "axon part" evidence=IDA

GO:0034111 "negative regulation of homotypic cell-cell adhesion" evidence=IMP

GO:0043204 "perikaryon" evidence=IDA

GO:0043539 "protein serine/threonine kinase activator activity" evidence=IEA;ISO

GO:0045597 "positive regulation of cell differentiation" evidence=IEA;ISO

GO:0046579 "positive regulation of Ras protein signal transduction" evidence=IMP

GO:0047496 "vesicle transport along microtubule" evidence=IDA

GO:0048313 "Golgi inheritance" evidence=IMP

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0048678 "response to axon injury" evidence=IMP

GO:0048812 "neuron projection morphogenesis" evidence=IMP

GO:0048870 "cell motility" evidence=IEA;ISO

GO:0051291 "protein heterooligomerization" evidence=IPI

GO:0051384 "response to glucocorticoid stimulus" evidence=IDA

GO:0060674 "placenta blood vessel development" evidence=IEA;ISO

GO:0060711 "labyrinthine layer development" evidence=IEA;ISO

GO:0071902 "positive regulation of protein serine/threonine kinase activity" evidence=ISO

GO:0090170 "regulation of Golgi inheritance" evidence=TAS

GO:0090398 "cellular senescence" evidence=IEA;ISO

GO:2000641 "regulation of early endosome to late endosome transport" evidence=TAS

GO:0005874 "microtubule" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q02750	MP2K1_HUMAN	2, ., 7, ., 1, 2, ., 2	0.7241	0.448	0.1424	yes	N/A
Q10664	MEK2_CAEEL	2, ., 7, ., 1, 2, ., 2	0.6379	0.464	0.1498	yes	N/A
Q63980	MP2K1_CRIGR	2, ., 7, ., 1, 2, ., 2	0.7068	0.448	0.1424	yes	N/A
P29678	MP2K1_RABIT	2, ., 7, ., 1, 2, ., 2	0.7241	0.448	0.1424	yes	N/A
Q01986	MP2K1_RAT	2, ., 7, ., 1, 2, ., 2	0.7241	0.448	0.1424	yes	N/A
Q9XT09	MP2K1_PANTR	2, ., 7, ., 1, 2, ., 2	0.7241	0.448	0.1424	yes	N/A
Q24324	DSOR1_DROME	2, ., 7, ., 1, 2, ., 2	0.8448	0.464	0.1464	yes	N/A
Q1HG70	MP2K2_CANFA	2, ., 7, ., 1, 2, ., 2	0.6052	0.592	0.185	yes	N/A
P10506	BYR1_SCHPO	2, ., 7, ., 1, 2, ., 2	0.5862	0.456	0.1676	yes	N/A
P31938	MP2K1_MOUSE	2, ., 7, ., 1, 2, ., 2	0.7241	0.448	0.1424	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	125
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	2e-32
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	8e-32
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	5e-24
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	8e-24
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	1e-23
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-23
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	3e-22
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	1e-21
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	9e-20
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-19
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	6e-16
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	6e-15
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	3e-14
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-13
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-13
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-11
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-11
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	2e-10
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-10
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	8e-10
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	5e-09
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	6e-09
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-09
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	9e-09
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-08
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	6e-08
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	7e-08
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	2e-07
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-07
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-07
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	3e-07
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	4e-07
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-07
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	1e-06
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	1e-06
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-06
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	4e-06
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	5e-06
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	7e-06
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	7e-06
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-05
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-05
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-05
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-05
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-05
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	3e-05
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	6e-05
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	7e-05
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	8e-05
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	1e-04
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	1e-04
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-04
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-04
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-04
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-04
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-04
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	3e-04
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	3e-04
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	4e-04
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	4e-04
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	4e-04
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	4e-04
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	5e-04
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	7e-04
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	8e-04
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	8e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	9e-04
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	0.001
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	0.001
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	0.001
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	0.001
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	0.001
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	0.003
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	0.004
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	0.004
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	0.004

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score =  115 bits (289), Expect = 2e-32
 Identities = 44/58 (75%), Positives = 51/58 (87%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           LKVLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE+ILG I+ A
Sbjct: 50  LKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIA 107

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score =  113 bits (285), Expect = 8e-32
 Identities = 46/65 (70%), Positives = 53/65 (81%)

Query: 5   SGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSA 64
           SG   + PRPMAIFELLDYIVNEPPPKLP+G F+D F+DFVD+CLKKNP ERADLK L+ 
Sbjct: 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTK 286

Query: 65  TTILK 69
              +K
Sbjct: 287 HPFIK 291

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 93.6 bits (232), Expect = 5e-24
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 54  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 111

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 93.2 bits (231), Expect = 8e-24
 Identities = 45/76 (59%), Positives = 56/76 (73%), Gaps = 2/76 (2%)

Query: 4   ISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLS 63
           +SG G +    MAIFELLDYIVNEPPPKLP G+FT  F++FV++CL KNP+ERADLK L 
Sbjct: 240 VSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLM 299

Query: 64  ATTILK--VLHECNFA 77
             T +K   + E +FA
Sbjct: 300 NHTFIKRSEVEEVDFA 315

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 92.4 bits (229), Expect = 1e-23
 Identities = 44/76 (57%), Positives = 54/76 (71%), Gaps = 2/76 (2%)

Query: 4   ISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLS 63
           +S  G +   PMAIFELLDYIVNEPPPKLP+G+F   F+DFV++CL KNP+ERADLK L 
Sbjct: 238 LSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLM 297

Query: 64  ATTILKV--LHECNFA 77
               +K     E +FA
Sbjct: 298 VHAFIKRSEAEEVDFA 313

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 90.8 bits (226), Expect = 2e-23
 Identities = 40/59 (67%), Positives = 47/59 (79%), Gaps = 1/59 (1%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTITSA 125
           L +LH+CN  +IVGFYGAF ++ DISICMEYMDGGSLD ILK+  G+IPE ILG I  A
Sbjct: 50  LDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVA 108

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 89.0 bits (220), Expect = 3e-22
 Identities = 40/58 (68%), Positives = 49/58 (84%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LK+A +IPE ILG ++ A
Sbjct: 54  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA 111

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 86.4 bits (214), Expect = 1e-21
 Identities = 32/58 (55%), Positives = 42/58 (72%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+++HEC   +IV FYGAF+++ +I +CME+MD GSLD I KK G IP  ILG I  A
Sbjct: 54  LQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVA 111

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 81.2 bits (201), Expect = 9e-20
 Identities = 30/49 (61%), Positives = 36/49 (73%)

Query: 14  PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
           P  IFELL YIVNEPPP+LP+G F+  F+DFV+ CL K+P ER   K L
Sbjct: 206 PDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKEL 254

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 79.9 bits (198), Expect = 2e-19
 Identities = 30/57 (52%), Positives = 37/57 (64%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITS 124
           LK L  C   ++V  YGAF  + +ISI +EYMDGGSL  +LKK GKIPE +L  I  
Sbjct: 50  LKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIAR 106

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 71.1 bits (174), Expect = 6e-16
 Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 4/58 (6%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L++L++C+  +I+GFYGAF  +  ISIC E+MDGGSLD+      KIPEH+LG I  A
Sbjct: 50  LEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVY----RKIPEHVLGRIAVA 103

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 68.3 bits (167), Expect = 6e-15
 Identities = 27/52 (51%), Positives = 34/52 (65%)

Query: 14  PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSAT 65
           PM I +LL  IV EPPP+LP+  F +  RDFVD CL K+P+ER   + L A 
Sbjct: 215 PMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 66.3 bits (162), Expect = 3e-14
 Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 16/96 (16%)

Query: 45  VDRCLKKNPSERADLKTLSATTI----------LKVLHECNFAHIVGFYGAFISDQD--I 92
           V +C  KN      LKT++              L++   C   +IV +YGAF+ +    I
Sbjct: 17  VTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSI 76

Query: 93  SICMEYMDGGSLDLILKK----AGKIPEHILGTITS 124
            I MEY +GGSLD I KK     G+I E +LG I  
Sbjct: 77  GIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAE 112

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 64.5 bits (157), Expect = 2e-13
 Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLIL---KKAGKIPEHILGTITS 124
           L +LH+    +IV FYGAF  +  + +CMEYMD GSLD +         IPE +L  IT 
Sbjct: 50  LDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITY 109

Query: 125 A 125
           A
Sbjct: 110 A 110

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 63.8 bits (156), Expect = 3e-13
 Identities = 22/51 (43%), Positives = 30/51 (58%)

Query: 12  PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
           P   + FEL+  I + PPP LPA  F+  FRDF+  CL+K+P +R     L
Sbjct: 203 PGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAEL 253

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 57.6 bits (140), Expect = 4e-11
 Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHILGTIT 123
           +++L +C   +IV +YG+++   ++ I ME+  GGSL DL+      + E  +  + 
Sbjct: 48  IQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVC 104

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 57.2 bits (139), Expect = 6e-11
 Identities = 17/56 (30%), Positives = 28/56 (50%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT 123
           +K+L +    +IV  Y  F  +  + + MEY +GG L  +LKK G++ E       
Sbjct: 48  IKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARFYL 103

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 55.9 bits (135), Expect = 2e-10
 Identities = 22/45 (48%), Positives = 30/45 (66%)

Query: 18  FELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
           F+ L  +V EP P+LPA  F+  F+DFV++CLKKN  ER +   L
Sbjct: 214 FQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPEL 258

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 55.3 bits (134), Expect = 3e-10
 Identities = 17/71 (23%), Positives = 28/71 (39%)

Query: 52  NPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA 111
                   K  +A   +++L   +  +IV    AF     + + MEY +GG L   L + 
Sbjct: 33  KKRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRG 92

Query: 112 GKIPEHILGTI 122
           G + E     I
Sbjct: 93  GPLSEDEAKKI 103

Length = 260

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 54.2 bits (131), Expect = 8e-10
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 10/57 (17%)

Query: 14  PM-AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           PM  +F     I    PP L    F+  F+DFV  CL K+P ER      SA  +LK
Sbjct: 203 PMRVLFL----IPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERP-----SAKELLK 250

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 52.0 bits (125), Expect = 5e-09
 Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 4/55 (7%)

Query: 72  HECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTITSA 125
           H+C   +IV  YG FI+D D+ ICME M    LD +LK+  G IPE ILG +T A
Sbjct: 71  HDC--PYIVKCYGYFITDSDVFICMELM-STCLDKLLKRIQGPIPEDILGKMTVA 122

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 51.7 bits (124), Expect = 6e-09
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 5/51 (9%)

Query: 12  PRPMAIFELLDYIVNEPPPKLP----AGIF-TDSFRDFVDRCLKKNPSERA 57
             P+   ELL YIVN P P+L      GI  ++ F+DF+ +CL+K+P+ R 
Sbjct: 208 EPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRP 258

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 51.1 bits (123), Expect = 7e-09
 Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPE 116
           +++L + N  +IV  YG F  +  + + MEY +GGSL DL+ +  GK+ E
Sbjct: 42  IEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSE 91

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 51.4 bits (123), Expect = 9e-09
 Identities = 18/38 (47%), Positives = 26/38 (68%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSER 56
           +LL  IV+E PP LP G F++ F  F+ +C++K P ER
Sbjct: 207 QLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKER 244

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 50.3 bits (121), Expect = 2e-08
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 13  RPMAIFELLDYIVNEPPPKLPAG-IFTDSFRDFVDRCLKKNPSERADLKTL 62
             +   + L  I    PP L     ++D F+DF+ +CL+KNP +R   + L
Sbjct: 198 SELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQL 248

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 49.2 bits (118), Expect = 6e-08
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 70  VLHECNFAHIVGFYGAFISDQDISICMEYMDGGS-LDLILKKAGKIPEHILGTIT 123
            L +C   +I  +YG+F+    + I MEY  GGS LDL+  K GK+ E  +  I 
Sbjct: 52  FLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLL--KPGKLDETYIAFIL 104

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 48.8 bits (117), Expect = 7e-08
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 70  VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
           +L EC   +IV ++G+++    + I MEY  GGSL  I + 
Sbjct: 53  MLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQV 93

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 47.5 bits (113), Expect = 2e-07
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 17  IFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
           IF  L  IV+  PP LP+G ++D  +DFV +CL K P+ R     L
Sbjct: 215 IFAQLSAIVDGDPPTLPSG-YSDDAQDFVAKCLNKIPNRRPTYAQL 259

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 16/55 (29%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHILGTI 122
            ++ +C   +IV +Y +++   ++ + MEYMDGGSL D+I +   ++ E  +  +
Sbjct: 67  LIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYV 121

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHI 118
           +K+L + N  +I+ +Y +F     + I MEY DGG L   +KK  K  +  
Sbjct: 50  VKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPF 100

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 46.9 bits (112), Expect = 3e-07
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)

Query: 49  LKKNPSERADLKTLSA-TTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI 107
           L+K   E   LK++     +LK L      +IV + G+  +   + I +EY + GSL  I
Sbjct: 35  LEKIKEE--ALKSIMQEIDLLKNL---KHPNIVKYIGSIETSDSLYIILEYAENGSLRQI 89

Query: 108 LKKAGKIPEHI 118
           +KK G  PE +
Sbjct: 90  IKKFGPFPESL 100

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 46.6 bits (111), Expect = 4e-07
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 18  FELLDYIVNEPPPKLP-AGIFTDSFRDFVDRCLKKNPSER 56
           FE+L  I+ E PP LP    F+  F  FVD CL K+  +R
Sbjct: 225 FEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKR 264

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 46.4 bits (111), Expect = 5e-07
 Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 2/42 (4%)

Query: 78  HIVGFYGAFISDQDISIC--MEYMDGGSLDLILKKAGKIPEH 117
           +IV +YG+   ++  ++   +EY+ GGSL  +LKK GK+PE 
Sbjct: 60  NIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEP 101

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 45.1 bits (107), Expect = 1e-06
 Identities = 24/50 (48%), Positives = 27/50 (54%), Gaps = 5/50 (10%)

Query: 78  HIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGK----IPEHILGTIT 123
           + V FYGA   + D+ ICME MD  SLD   KK       IPE ILG I 
Sbjct: 61  YTVTFYGALFREGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIA 109

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 25/52 (48%), Positives = 26/52 (50%), Gaps = 6/52 (11%)

Query: 79  IVGFYGAFISDQDISICMEYMDGGSLDLILK-----KAGKIPEHILGTITSA 125
           IV FYGA   + D  ICME MD  SLD   K         IPE ILG I  A
Sbjct: 65  IVKFYGALFREGDCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVA 115

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 44.6 bits (106), Expect = 2e-06
 Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 66  TILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGK 113
           +ILK   +C+  +IV +YG++  + D+ I MEY   GS+  I+K   K
Sbjct: 50  SILK---QCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNK 94

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 43.9 bits (103), Expect = 4e-06
 Identities = 18/47 (38%), Positives = 29/47 (61%)

Query: 70  VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
           ++ EC   +IV ++G+++S + + ICMEY  GGSL  I    G + E
Sbjct: 59  MVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSE 105

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 43.4 bits (103), Expect = 5e-06
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 24  IVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
           IV +  P LP GI +   +DF+ +C +K+P+ R   K L
Sbjct: 211 IVQDDHPPLPEGI-SPELKDFLMQCFQKDPNLRPTAKQL 248

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 43.0 bits (102), Expect = 7e-06
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 10  NVPRPMAIFELLDYIVNEPPPKLP-AGIFTDSFRDFVDRCLKKNPSERADLKTL 62
             P   A+F     I  +  P L     ++  F+DF+++CL K+P +R   + L
Sbjct: 218 REPPLRALF----LITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEEL 267

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 43.3 bits (103), Expect = 7e-06
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)

Query: 49  LKKNPSERADLKTLSATTILKVL-HECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI 107
           LK+  SE    + L   +I+K L H     +IV   G     + + I  EYM GG L   
Sbjct: 36  LKEGASEEEREEFLEEASIMKKLSHP----NIVRLLGVCTQGEPLYIVTEYMPGGDLLDF 91

Query: 108 LKK 110
           L+K
Sbjct: 92  LRK 94

Length = 258

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 42.3 bits (100), Expect = 1e-05
 Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 3/57 (5%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILK---KAGKIPEHILGTI 122
           + + +CN  ++V +Y +F+   ++ + M Y+ GGSL  I+K     G + E I+ T+
Sbjct: 51  QAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATV 107

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 12/63 (19%)

Query: 9   SNVPRPMAIFELLDYIVNEPPPKL--PAGIFTDSFRDFVDRCLKKNPSERADLKTLSATT 66
           S++    AIF     I N+PPP L  P   ++  F DFV +CL K+P ER      SA  
Sbjct: 200 SDIHPMRAIFM----IPNKPPPTLSDP-EKWSPEFNDFVKKCLVKDPEERP-----SAIQ 249

Query: 67  ILK 69
           +L+
Sbjct: 250 LLQ 252

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 48  CLKKNPSERADLKTLSATTILKVL-HECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL 106
            LK++ SE+   + L    I++ L H     +IV   G    ++ + I MEYM GG L  
Sbjct: 35  TLKEDASEQQIEEFLREARIMRKLDHP----NIVKLLGVCTEEEPLMIVMEYMPGGDLLD 90

Query: 107 ILKKAGK 113
            L+K   
Sbjct: 91  YLRKNRP 97

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 42.1 bits (99), Expect = 2e-05
 Identities = 17/48 (35%), Positives = 25/48 (52%)

Query: 15  MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
           M     L +I     P L +  ++D FR+FVD CL+K P +R   + L
Sbjct: 217 MNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEEL 264

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)

Query: 48  CLKKNPSERADLKTLSATTILKVL-HECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL 106
            LK++ SE+   + L    I++ L H     ++V   G    ++ + I MEYM+GG L  
Sbjct: 35  TLKEDASEQQIEEFLREARIMRKLDHP----NVVKLLGVCTEEEPLYIVMEYMEGGDLLS 90

Query: 107 ILKKAGK 113
            L+K   
Sbjct: 91  YLRKNRP 97

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 41.2 bits (97), Expect = 3e-05
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 8/55 (14%)

Query: 8   GSNVPRPMAIFELLDYIVNEPPPKLPAGI----FTDSFRDFVDRCLKKNPSERAD 58
            S  P PM +  L    +   PP L  G     ++ SFR  +  CL+K+PS+R  
Sbjct: 207 YSKYP-PMKVLML---TLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPT 257

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 40.7 bits (96), Expect = 6e-05
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 6/45 (13%)

Query: 14  PM-AIFELLDYIVNEPPPKL-PAGIFTDSFRDFVDRCLKKNPSER 56
           PM A+F+    I   PPP L     ++  F DF+  CL KN  +R
Sbjct: 223 PMRALFK----IPRNPPPTLKSPENWSKKFNDFISECLIKNYEQR 263

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 40.4 bits (95), Expect = 7e-05
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 12  PRPMAIFELLDYIVNEPPPKLPAGI---FTDSFRDFVDRCLKKNPSERADLKTLSATTIL 68
           P+  ++F+ L  +V   PP L       F+ SF +F++ CL K+ S+R   K L     +
Sbjct: 211 PKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFI 270

Query: 69  K 69
           K
Sbjct: 271 K 271

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 40.1 bits (94), Expect = 8e-05
 Identities = 16/44 (36%), Positives = 27/44 (61%)

Query: 70  VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGK 113
           +L EC   +IVG Y A+  +  + I +E+ DGG+LD I+ +  +
Sbjct: 55  ILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELER 98

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 39.9 bits (93), Expect = 1e-04
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)

Query: 51  KNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
              +E+   K      +LK L   N   IV + G  + D  ISI ME++ GGS+  IL +
Sbjct: 39  VLAAEKEYEKLQEEVDLLKSLKHVN---IVQYLGTCLDDNTISIFMEFVPGGSISSILNR 95

Query: 111 AGKIPEHIL 119
            G +PE + 
Sbjct: 96  FGPLPEPVF 104

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 39.4 bits (92), Expect = 1e-04
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 75  NFAH--IVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT 123
           N  H  IV +YG    D+ +SI MEYM GGS+   LK  G + E +    T
Sbjct: 60  NLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYT 110

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 3/56 (5%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS-LDLILKKAGKIPEHILGTI 122
           + VL +C+  ++  +YG+++ D  + I MEY+ GGS LDL+  + G + E  + TI
Sbjct: 53  ITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATI 106

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 15/52 (28%), Positives = 24/52 (46%)

Query: 18  FELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           F  +  I    PP+L    ++   R+FV  CL + P ER   + L  +  +K
Sbjct: 208 FRAMMLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIK 259

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 39.2 bits (91), Expect = 2e-04
 Identities = 19/42 (45%), Positives = 23/42 (54%)

Query: 15  MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSER 56
           M     L +I     P L +  +TDSFR FVD CL+K P ER
Sbjct: 223 MNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQER 264

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 39.0 bits (91), Expect = 2e-04
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 6/64 (9%)

Query: 52  NPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKK 110
           +  ER D   L+   IL +L   N   I+ +Y  F+ D  + I MEY +GG+L D I+++
Sbjct: 39  SEKERRD--ALNEIVILSLLQHPN---IIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQ 93

Query: 111 AGKI 114
            G++
Sbjct: 94  KGQL 97

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 38.9 bits (90), Expect = 2e-04
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 3/56 (5%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS-LDLILKKAGKIPEHILGTI 122
           + VL +C+  +I  +YG+++    + I MEY+ GGS LDL+  K G + E  + TI
Sbjct: 53  ITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLL--KPGPLEETYIATI 106

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 17/56 (30%), Positives = 31/56 (55%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT 123
           +KVL      ++V +YG  +  + + I MEY  GG+L+ +L+    + EH++   T
Sbjct: 50  MKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYT 105

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 38.9 bits (90), Expect = 3e-04
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)

Query: 47  RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL 106
           + +K  P E  D   +    I+  + +C  ++IV ++G+++    + ICME+  GGSL  
Sbjct: 40  KVIKLEPGE--DFAVVQQEIIM--MKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQD 95

Query: 107 ILKKAGKIPE 116
           I    G + E
Sbjct: 96  IYHVTGPLSE 105

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 19/48 (39%), Positives = 24/48 (50%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
           ++L ECN   IV  Y  F   + I + MEY  GG L  IL+  G   E
Sbjct: 45  EILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDE 92

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHILGTITSA 125
            +V+ +    ++V   G    ++ + + +EYM+GG L D + K     P     T++  
Sbjct: 47  ARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLK 105

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 38.1 bits (88), Expect = 4e-04
 Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS-LDLILKKAGKIPEHILGTI 122
           + VL +C+  ++  +YG+++    + I MEY+ GGS LDL+  +AG   E  + T+
Sbjct: 53  ITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLL--RAGPFDEFQIATM 106

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 38.1 bits (88), Expect = 4e-04
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 15  MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
           M    +L  I    PP L  G F+  F++F+D CL K+PS R   K L
Sbjct: 204 MHPMRVLFLIPKNNPPTL-TGEFSKPFKEFIDACLNKDPSFRPTAKEL 250

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 13/49 (26%), Positives = 27/49 (55%)

Query: 70  VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHI 118
           +L +    ++V  Y +F   +++ + MEY+ GG L  +L+  G + E +
Sbjct: 46  ILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDV 94

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 37.9 bits (89), Expect = 5e-04
 Identities = 14/54 (25%), Positives = 23/54 (42%), Gaps = 6/54 (11%)

Query: 17  IFELLDYIVNEPPPKL-PAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           + EL   I    PP   P    +   +D + + L K+P +R     L+A   L+
Sbjct: 202 LLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKR-----LTAEEALQ 250

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 6/55 (10%)

Query: 70  VLHECNFAHIVGFYGAFI--SDQDISICMEYMDGGSLDLILKKAGK----IPEHI 118
           +L E    +IV +Y   I  S+Q + I MEY +GG L  +++K  K    I E  
Sbjct: 52  ILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEF 106

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 37.5 bits (87), Expect = 7e-04
 Identities = 14/47 (29%), Positives = 27/47 (57%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIP 115
           +VL + + ++I+ +Y +F+    ++I MEY + G L  +LK     P
Sbjct: 51  RVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRP 97

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 37.2 bits (87), Expect = 8e-04
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 3/49 (6%)

Query: 9   SNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERA 57
           S +  PMA   L     +  PP++P  + ++  +DF+ +CL+++P +R 
Sbjct: 204 SELGNPMA--ALYKIGSSGEPPEIPEHL-SEEAKDFLRKCLRRDPKKRP 249

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 37.1 bits (86), Expect = 8e-04
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 54  SERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGK 113
           ++   L   +   +LK+L   N   I+ +Y  F+ D+ + I MEY  GG+L   ++K   
Sbjct: 39  TKDERLAAQNECQVLKLLSHPN---IIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCN 95

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 37.1 bits (87), Expect = 9e-04
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 6/51 (11%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           EL   I+    P +P+  ++   R+ V   L+K+P ER      S   IL+
Sbjct: 210 ELALKILKGQYPPIPS-QYSSELRNLVSSLLQKDPEER-----PSIAQILQ 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 36.5 bits (85), Expect = 0.001
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 6/45 (13%)

Query: 26  NEPPPKLPA-GIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           N PPPKL     ++  F DF+ +CL K+P +R      +AT +L+
Sbjct: 220 NFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRP-----TATKLLQ 259

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 8/48 (16%)

Query: 24  IVNEPPPKL--PAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           I+   PP L  P+  ++ SF DF+  CL K+P +R      +A  +LK
Sbjct: 220 ILKSEPPTLDQPSK-WSSSFNDFLKSCLVKDPDDRP-----TAAELLK 261

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 67  ILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT 123
           +L  L +    +I  +YG+++    + I MEY +GGS+   L KAG I E  +  I 
Sbjct: 52  LLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSV-RTLMKAGPIAEKYISVII 107

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 37.1 bits (86), Expect = 0.001
 Identities = 15/52 (28%), Positives = 28/52 (53%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHIL 119
           ++++   N  HI+   GA   D   ++ +E+M GGS+  +L K G   E ++
Sbjct: 54  IRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVI 105

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 15  MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHE 73
           M ++ L   I     P LPA  +++  RD V RC+  +P +R D+  +    + K +H 
Sbjct: 211 MNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYV--LQVAKEMHA 267

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 35.4 bits (81), Expect = 0.003
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 15  MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSER 56
           M     L +I     P L +G +++ FR+FVD CL+K P +R
Sbjct: 217 MNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR 258

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 35.5 bits (82), Expect = 0.004
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 79  IVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
           IV + G    + ++ I +E + GGSL  +LKK G  PE
Sbjct: 64  IVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPE 101

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 35.4 bits (81), Expect = 0.004
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 15  MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSER 56
           M     L +I     P L +  ++D FR+FVD CL+K P +R
Sbjct: 227 MNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDR 268

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 35.2 bits (81), Expect = 0.004
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 12/80 (15%)

Query: 48  CLKKNPSERADLKTLSATTILK------------VLHECNFAHIVGFYGAFISDQDISIC 95
              K   E   +K L    ILK            +L E +   IV    +F  +  +   
Sbjct: 37  AKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96

Query: 96  MEYMDGGSLDLILKKAGKIP 115
           +E++ GG L   L+KAG+ P
Sbjct: 97  LEFVVGGELFTHLRKAGRFP 116

Length = 329

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	125
KOG0595|consensus	429		99.8
KOG0611|consensus	668		99.72
KOG0581|consensus	364		99.71
KOG0591|consensus	375		99.69
KOG0598|consensus	357		99.66
KOG0661|consensus	538		99.63
KOG0197|consensus	468		99.62
KOG0597|consensus	808		99.61
KOG0605|consensus	550		99.59
KOG0574|consensus	502		99.59
KOG0616|consensus	355		99.58
KOG0575|consensus	592		99.57
KOG0589|consensus	426		99.57
KOG0192|consensus	362		99.56
KOG0194|consensus	474		99.54
KOG0615|consensus	475		99.54
KOG0576|consensus	829		99.5
KOG1026|consensus	774		99.5
KOG0600|consensus	560		99.49
KOG4278|consensus	1157		99.49
KOG0610|consensus	459		99.46
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.46
KOG1187|consensus	361		99.46
KOG0584|consensus	632		99.46
KOG0592|consensus	604		99.45
KOG0582|consensus	516		99.44
KOG0583|consensus	370		99.43
KOG0198|consensus	313		99.42
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.42
KOG0201|consensus	467		99.42
KOG0578|consensus	550		99.42
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.42
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.42
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.41
KOG0579|consensus	1187		99.41
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.41
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.41
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.4
KOG0659|consensus	318		99.4
KOG0593|consensus	396		99.4
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.4
KOG0577|consensus	948		99.39
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.39
KOG0032|consensus	382		99.39
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.38
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.38
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.38
KOG0580|consensus	281		99.37
KOG0612|consensus	1317		99.37
KOG0588|consensus	786		99.36
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.36
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.36
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.36
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.36
KOG4257|consensus	974		99.34
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.34
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.34
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.34
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.34
KOG0586|consensus	596		99.34
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.34
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.33
KOG1094|consensus	807		99.33
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.32
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.32
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.31
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.31
KOG0663|consensus	419		99.3
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.3
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.3
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.3
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.3
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.29
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.29
KOG0587|consensus	953		99.28
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.28
KOG1095|consensus	1025		99.27
KOG1151|consensus	775		99.27
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.27
KOG0690|consensus	516		99.27
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.27
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.27
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.26
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.26
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.26
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.26
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.26
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.26
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.26
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.26
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.25
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.25
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.25
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.25
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.25
KOG0196|consensus	996		99.24
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.24
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.24
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.24
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.23
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.23
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.23
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.23
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.23
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.22
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.22
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.22
KOG4721|consensus	904		99.21
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.21
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.21
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.21
PHA02988	283	hypothetical protein; Provisional	99.2
KOG0033|consensus	355		99.2
KOG2052|consensus	513		99.2
KOG0607|consensus	463		99.2
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.2
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.19
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.19
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.19
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.19
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.19
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.18
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.18
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.18
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.18
PTZ00267	478	NIMA-related protein kinase; Provisional	99.18
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.18
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.18
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.18
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.18
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.17
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.17
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.17
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.17
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.17
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.17
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.17
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.16
KOG0199|consensus	1039		99.16
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.16
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.16
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.16
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.16
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.16
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.16
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.16
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.16
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.16
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.15
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.15
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.15
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.15
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.15
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.15
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.15
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.15
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.14
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.14
KOG0694|consensus	694		99.14
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.14
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.14
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.14
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.14
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.14
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.14
PHA03212	391	serine/threonine kinase US3; Provisional	99.14
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.13
KOG4250|consensus	732		99.13
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.13
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.13
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.13
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.13
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.13
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.12
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.12
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.12
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.12
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.12
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.12
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.12
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.12
KOG4279|consensus	1226		99.12
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.11
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.11
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.11
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.11
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.11
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.11
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.11
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.11
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.1
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.1
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.1
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.1
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.1
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.1
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.09
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.09
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.09
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.09
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.09
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.09
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.09
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.09
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.08
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.08
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.08
KOG0608|consensus	1034		99.08
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.08
KOG0585|consensus	576		99.08
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.08
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.08
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.08
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.07
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.07
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.07
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.07
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.07
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.07
KOG4717|consensus	864		99.07
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.07
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.07
KOG4236|consensus	888		99.07
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.06
KOG0662|consensus	292		99.06
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.06
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.06
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.06
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.06
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.06
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.05
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.05
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.05
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.05
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.05
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.04
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.04
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.04
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.04
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.04
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.04
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.03
KOG1989|consensus	738		99.03
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.03
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.03
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.03
KOG0594|consensus	323		99.03
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.03
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.02
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.02
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.02
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.02
KOG4645|consensus	1509		99.02
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.01
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.01
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.0
KOG0660|consensus	359		99.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.0
KOG1025|consensus	1177		99.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.99
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.99
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.99
KOG0193|consensus	678		98.99
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	98.99
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	98.99
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	98.99
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.99
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.98
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.98
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.98
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.98
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.97
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.97
KOG3653|consensus	534		98.97
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	98.96
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	98.96
KOG0658|consensus	364		98.95
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.95
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.94
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	98.94
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.94
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.94
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.94
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.94
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	98.94
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.93
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.93
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.93
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.93
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.93
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	98.93
PHA03209	357	serine/threonine kinase US3; Provisional	98.92
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.92
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	98.92
KOG0986|consensus	591		98.91
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.91
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	98.91
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.91
PHA03211	461	serine/threonine kinase US3; Provisional	98.9
KOG0599|consensus	411		98.9
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.9
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.89
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	98.88
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	98.88
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	98.88
PHA03207	392	serine/threonine kinase US3; Provisional	98.88
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	98.88
PTZ00036	440	glycogen synthase kinase; Provisional	98.88
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	98.88
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.87
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.86
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.85
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	98.85
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.85
PTZ00283	496	serine/threonine protein kinase; Provisional	98.84
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.84
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.84
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.83
PHA03210	501	serine/threonine kinase US3; Provisional	98.81
PLN00009	294	cyclin-dependent kinase A; Provisional	98.81
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.8
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.8
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.8
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	98.79
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	98.79
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.79
KOG1006|consensus	361		98.79
PRK09188	365	serine/threonine protein kinase; Provisional	98.79
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.78
KOG0695|consensus	593		98.77
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.77
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	98.77
KOG0666|consensus	438		98.76
KOG0983|consensus	391		98.76
KOG0669|consensus	376		98.75
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	98.75
PRK10345	210	hypothetical protein; Provisional	98.75
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.74
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	98.74
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	98.73
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	98.73
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	98.73
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.72
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	98.72
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.72
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	98.71
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.71
KOG0667|consensus	586		98.71
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	98.7
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	98.69
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	98.69
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	98.68
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.68
KOG0604|consensus	400		98.67
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.67
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.67
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	98.67
KOG0200|consensus	609		98.66
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.65
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.65
KOG1152|consensus	772		98.65
KOG0668|consensus	338		98.65
KOG0696|consensus	683		98.64
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.64
KOG0614|consensus	732		98.61
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.6
KOG0984|consensus	282		98.6
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	98.6
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	98.59
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.59
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	98.58
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	98.57
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.55
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.54
PTZ00284	467	protein kinase; Provisional	98.54
KOG2345|consensus	302		98.51
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.45
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.44
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.42
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.41
KOG1035|consensus	1351		98.4
KOG0596|consensus	677		98.31
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.31
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.14
KOG1167|consensus	418		98.14
PRK14879	211	serine/threonine protein kinase; Provisional	98.13
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.09
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.08
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.07
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.04
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.02
KOG1290|consensus	590		97.97
KOG0671|consensus	415		97.95
KOG0664|consensus	449		97.92
KOG1024|consensus	563		97.9
KOG0603|consensus	612		97.9
KOG0195|consensus	448		97.85
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	97.78
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.7
KOG1163|consensus	341		97.63
PHA02882	294	putative serine/threonine kinase; Provisional	97.58
KOG0581|consensus	364		97.56
KOG1027|consensus	903		97.49
COG0515	384	SPS1 Serine/threonine protein kinase [General func	97.27
PRK12274	218	serine/threonine protein kinase; Provisional	97.23
KOG1165|consensus	449		97.2
smart00090	237	RIO RIO-like kinase.	97.13
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	97.13
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	97.02
KOG0577|consensus	948		96.98
KOG1345|consensus	378		96.79
KOG1164|consensus	322		96.74
KOG0603|consensus	612		96.54
KOG0983|consensus	391		96.42
KOG1266|consensus	458		96.32
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	96.1
KOG0665|consensus	369		95.88
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	95.75
KOG0201|consensus	467		95.2
KOG1166|consensus	974		95.0
KOG0578|consensus	550		94.93
KOG0670|consensus	752		94.92
KOG1023|consensus	484		94.61
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	93.35
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	93.3
KOG3741|consensus	655		93.3
KOG0576|consensus	829		93.01
KOG0574|consensus	502		92.08
KOG1243|consensus	690		91.1
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	90.69
KOG0590|consensus	601		89.26
KOG0590|consensus	601		89.07
KOG0579|consensus	1187		88.29
KOG0601|consensus	524		88.08
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	86.74
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	86.71
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	85.11
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	82.15
KOG1240|consensus	1431		81.59

>KOG0595|consensus

Probab=99.80  E-value=6.7e-20  Score=126.24  Aligned_cols=101  Identities=23%  Similarity=0.367  Sum_probs=80.6

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHh-hhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKT-LSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~-~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ...|+...+|        |.|+|+.||++.+..     +++.......+.+. ..+..|+++++.++|+|||.++++..+
T Consensus         9 ~~~y~~~~~i--------G~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~   80 (429)
T KOG0595|consen    9 VGDYELSREI--------GSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIED   80 (429)
T ss_pred             cccceehhhc--------cCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEec
Confidence            4578888888        999999999987641     22222222212222 246689999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++.+|+|||||.||+|.+||++++.++|..++.+.
T Consensus        81 ~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm  115 (429)
T KOG0595|consen   81 DDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFM  115 (429)
T ss_pred             CCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence            99999999999999999999999899998877553

>KOG0611|consensus

Probab=99.72  E-value=1.4e-17  Score=115.82  Aligned_cols=106  Identities=17%  Similarity=0.302  Sum_probs=85.5

Q ss_pred             CCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc--HHhhhHHHHHHHHHhcCCCceeee
Q psy14717         10 NVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD--LKTLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        10 ~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~--~~~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      ...+...+|++.+.+        |+|+||.|-+++..     .+++........  .....+.+|+++|+.++||||+++
T Consensus        47 hkhnlkHRyE~~etL--------GkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~I  118 (668)
T KOG0611|consen   47 HKHNLKHRYEITETL--------GKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQI  118 (668)
T ss_pred             cccchhhHHHHHHHh--------cCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeeh
Confidence            345667899999999        99999999987653     122222222222  223367799999999999999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.+|...+.+.|||||..+|.|++|+..++.++|..++.++
T Consensus       119 yEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfF  159 (668)
T KOG0611|consen  119 YEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFF  159 (668)
T ss_pred             hhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHH
Confidence            99999999999999999999999999999999998887654

>KOG0581|consensus

Probab=99.71  E-value=9.2e-18  Score=114.49  Aligned_cols=101  Identities=41%  Similarity=0.594  Sum_probs=82.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      ++++.+..|        |.|+-|.|+++.+.     .+++..........+.++.+|+++++.++|||||.+|++|..+.
T Consensus        79 ~dle~~~~l--------G~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~  150 (364)
T KOG0581|consen   79 SDLERLGVL--------GSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG  150 (364)
T ss_pred             HHhhhhhhc--------ccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC
Confidence            477777788        99999999997654     13333322222233446889999999999999999999999999


Q ss_pred             -eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhhc
Q psy14717         91 -DISICMEYMDGGSLDLILKKAGKIPEHILGTITS  124 (125)
Q Consensus        91 -~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~~  124 (125)
                       .++|+||||.+|||.++++..++++|+.+.+++.
T Consensus       151 ~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~  185 (364)
T KOG0581|consen  151 EEISICMEYMDGGSLDDILKRVGRIPEPVLGKIAR  185 (364)
T ss_pred             ceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHH
Confidence             4999999999999999999989999999988775

>KOG0591|consensus

Probab=99.69  E-value=4.3e-18  Score=113.28  Aligned_cols=115  Identities=26%  Similarity=0.373  Sum_probs=84.7

Q ss_pred             CCCCCCCC---CCCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHH
Q psy14717          1 MDSISGSG---SNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVL   71 (125)
Q Consensus         1 ~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~   71 (125)
                      ||..+..+   ++.......|+++++|        |+|+||+||++...     .+.++..-.. .+.+...+..|+.++
T Consensus         1 M~~~~~~~~~~~~~~~~l~~y~Il~~I--------G~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lL   72 (375)
T KOG0591|consen    1 MDKQSSAMMDFSPPQKTLADYQILKKI--------GRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLL   72 (375)
T ss_pred             CCcccccccCCCCCcccHHHHHHHHHH--------cCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHH
Confidence            44444443   4445666799999999        99999999985431     1222222111 222334577899999


Q ss_pred             HhcCCCceeeeee-eEEeCCe-EEEEEEecCCCCHHHHHHHc----CCCCHHHHhhhh
Q psy14717         72 HECNFAHIVGFYG-AFISDQD-ISICMEYMDGGSLDLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus        72 ~~~~h~~iv~~~~-~~~~~~~-~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~~  123 (125)
                      ++++|||||++++ .|..++. ++|+||+|..|+|..+|+..    +.++|+.++++.
T Consensus        73 kQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f  130 (375)
T KOG0591|consen   73 KQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYF  130 (375)
T ss_pred             HhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHH
Confidence            9999999999998 7766666 99999999999999999764    579999988765

>KOG0598|consensus

Probab=99.66  E-value=1.8e-16  Score=108.14  Aligned_cols=98  Identities=20%  Similarity=0.329  Sum_probs=79.9

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH------------HhhhHHHHHHHHHhcCCCcee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL------------KTLSATTILKVLHECNFAHIV   80 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~~~~~~~~h~~iv   80 (125)
                      ...+.|++++.|        |.|+||+||.+.     ++...+..+.            +......|..++..++||+||
T Consensus        22 ~~~~dF~~lkvi--------GkG~fGkV~~Vr-----k~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv   88 (357)
T KOG0598|consen   22 VGPDDFEILKVI--------GKGSFGKVFQVR-----KKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIV   88 (357)
T ss_pred             CChhheeeeeee--------eccCCceEEEEE-----EcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEe
Confidence            345689999999        999999999632     2222222221            122456899999999999999


Q ss_pred             eeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         81 GFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        81 ~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .++..|++...+|+|+||++||.|.-.|.+.+.|+|..+++|+
T Consensus        89 ~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYl  131 (357)
T KOG0598|consen   89 KLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYL  131 (357)
T ss_pred             eeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHH
Confidence            9999999999999999999999999999999999999988775

>KOG0661|consensus

Probab=99.63  E-value=1.6e-16  Score=111.72  Aligned_cols=103  Identities=16%  Similarity=0.181  Sum_probs=81.5

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcC-CCceeeeeeeE
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECN-FAHIVGFYGAF   86 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~iv~~~~~~   86 (125)
                      ..+++|.+++++        |.|+||.||++...     .++++...+....++..-+||+..+++++ |||||++.+++
T Consensus         7 ~~m~RY~~i~kl--------GDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi   78 (538)
T KOG0661|consen    7 IFMDRYTVIRKL--------GDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVI   78 (538)
T ss_pred             hHHHHHHHHHHh--------cCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHh
Confidence            467899999999        99999999985321     12222222222233334568999999998 99999999999


Q ss_pred             EeCC-eEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhhc
Q psy14717         87 ISDQ-DISICMEYMDGGSLDLILKKA-GKIPEHILGTITS  124 (125)
Q Consensus        87 ~~~~-~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~~  124 (125)
                      .+++ .+|+|||||.. +|+++++.+ +.|+|..++.|++
T Consensus        79 ~d~~~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~  117 (538)
T KOG0661|consen   79 RDNDRILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMY  117 (538)
T ss_pred             hccCceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHH
Confidence            9988 89999999999 999999976 6799999998875

>KOG0197|consensus

Probab=99.62  E-value=7.1e-16  Score=109.08  Aligned_cols=100  Identities=19%  Similarity=0.272  Sum_probs=77.2

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +...+.++++|        |+|.||.|+.+.+..    +.+...  ..+.....+.+|+.+|+.++|++||++++++...
T Consensus       204 ~r~~l~l~~~L--------G~G~FG~V~~g~~~~~~~vavk~ik--~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~  273 (468)
T KOG0197|consen  204 PREELKLIREL--------GSGQFGEVWLGKWNGSTKVAVKTIK--EGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ  273 (468)
T ss_pred             cHHHHHHHHHh--------cCCccceEEEEEEcCCCcccceEEe--ccccChhHHHHHHHHHHhCcccCeEEEEEEEecC
Confidence            34678888999        999999999886641    111111  1123333577999999999999999999999998


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      ..+|||||||+.|+|.++|+..  ..+...++..++
T Consensus       274 ~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a  309 (468)
T KOG0197|consen  274 EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFA  309 (468)
T ss_pred             CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHH
Confidence            8999999999999999999973  456666665544

>KOG0597|consensus

Probab=99.61  E-value=2.6e-16  Score=113.00  Aligned_cols=101  Identities=22%  Similarity=0.351  Sum_probs=80.8

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCC-CccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNP-SERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      |+.|-+++.|        |.|+||.||++.-.     .+++... ..+...+-..+.+|+++++.++||||+.++++|+.
T Consensus         1 me~yhv~e~i--------G~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt   72 (808)
T KOG0597|consen    1 MEQYHVYEMI--------GEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFET   72 (808)
T ss_pred             CcchhHHHHh--------cCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcc
Confidence            4578888999        99999999997532     1122111 12222222357799999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhhc
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTITS  124 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~~  124 (125)
                      ...+|+|+|||.| +|..+|.+.+.++|..++.+++
T Consensus        73 ~~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~  107 (808)
T KOG0597|consen   73 SAHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAY  107 (808)
T ss_pred             cceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHH
Confidence            9999999999999 9999999999999999987764

>KOG0605|consensus

Probab=99.59  E-value=1.3e-15  Score=108.29  Aligned_cols=97  Identities=25%  Similarity=0.360  Sum_probs=81.4

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHhh------------hHHHHHHHHHhcCCCceee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL------------SATTILKVLHECNFAHIVG   81 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~~------------~~~~e~~~~~~~~h~~iv~   81 (125)
                      ..++|+++..|        |+|.||.||.     |.++......+.+.+            .+..|-.+|....+++||+
T Consensus       139 ~~~DFe~Lk~I--------gkGAfGeVrL-----arKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVK  205 (550)
T KOG0605|consen  139 SLDDFELLKVI--------GKGAFGEVRL-----ARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVK  205 (550)
T ss_pred             Ccccchhheee--------ccccceeEEE-----EEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEE
Confidence            34688999999        9999999998     555555544443322            4557888888889999999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++.+|.+...+|+||||++||++..+|.+.+.|+|.++++++
T Consensus       206 LyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYi  247 (550)
T KOG0605|consen  206 LYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYI  247 (550)
T ss_pred             EEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHH
Confidence            999999999999999999999999999999999999998875

>KOG0574|consensus

Probab=99.59  E-value=2.8e-15  Score=101.20  Aligned_cols=99  Identities=19%  Similarity=0.480  Sum_probs=78.7

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .+.+.|+++.++        |.|+||.||++.+.-     +.++++..   ..-.++..|+.+|.+|..+++|++||+|.
T Consensus        30 ~PEEVFDi~~KL--------GEGSYGSV~KAIH~EsG~v~AIK~VPV~---sDLQEIIKEISIMQQC~S~yVVKYYGSYF   98 (502)
T KOG0574|consen   30 PPEEVFDIVGKL--------GEGSYGSVHKAIHRESGHVLAIKKVPVD---TDLQEIIKEISIMQQCKSKYVVKYYGSYF   98 (502)
T ss_pred             ChHHHHHHHHHh--------cCCcchHHHHHHHhccCcEEEEEecCcc---chHHHHHHHHHHHHHcCCchhhhhhhhhc
Confidence            356688888998        999999999976641     22222222   12235668999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTI  122 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~  122 (125)
                      ....+|||||||.-|++.++++-+ ..++|+.+..+
T Consensus        99 K~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~i  134 (502)
T KOG0574|consen   99 KHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAV  134 (502)
T ss_pred             cCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHH
Confidence            999999999999999999999854 67888877544

>KOG0616|consensus

Probab=99.58  E-value=3.8e-15  Score=99.77  Aligned_cols=103  Identities=23%  Similarity=0.367  Sum_probs=80.0

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhh-cCCCccccHHhh-hHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLK-KNPSERADLKTL-SATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~-~~~~~~~~~~~~-~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      ..++|+.+..+        |.|+||.|......     .+.+ ....+....++. ...+|..+++.+.||+++.+++.|
T Consensus        42 ~l~dfe~~~tl--------GtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~  113 (355)
T KOG0616|consen   42 SLQDFERLKTL--------GTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTF  113 (355)
T ss_pred             chhhhhheeee--------ccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEee
Confidence            44577777777        99999999863221     1111 111222223332 456899999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhhc
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITS  124 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~~  124 (125)
                      .+...+|+||||++||.|..++++.++|+|+.+++++.
T Consensus       114 ~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAA  151 (355)
T KOG0616|consen  114 KDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAA  151 (355)
T ss_pred             ccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHH
Confidence            99999999999999999999999999999999998864

>KOG0575|consensus

Probab=99.57  E-value=3e-15  Score=107.58  Aligned_cols=99  Identities=17%  Similarity=0.219  Sum_probs=77.9

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-c-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-D-LKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .|...+.+        |+|+|..+|.+...     .|.+.++.... . -....+.+|+++.+.++|||||+++++|++.
T Consensus        19 ~Y~~g~~L--------GkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs   90 (592)
T KOG0575|consen   19 RYKRGRFL--------GKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDS   90 (592)
T ss_pred             eeeeeeee--------ccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecC
Confidence            36666666        99999999986541     22333332211 1 1122467899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.+||+.|+|..|+|..++++++.++|..++++.
T Consensus        91 ~nVYivLELC~~~sL~el~Krrk~ltEpEary~l  124 (592)
T KOG0575|consen   91 NNVYIVLELCHRGSLMELLKRRKPLTEPEARYFL  124 (592)
T ss_pred             CceEEEEEecCCccHHHHHHhcCCCCcHHHHHHH
Confidence            9999999999999999999998999999998765

>KOG0589|consensus

Probab=99.57  E-value=7.4e-15  Score=103.35  Aligned_cols=103  Identities=25%  Similarity=0.327  Sum_probs=81.3

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .++.|+.++++        |.|+||.++...+.     .+++++...+.. ..+....+|+.+++++.|||||.+.++|.
T Consensus         2 ~m~~Ye~~~~i--------G~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~   73 (426)
T KOG0589|consen    2 EMDNYEVLRQV--------GRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFE   73 (426)
T ss_pred             ccchhhhhhhc--------CccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchh
Confidence            35789999999        99999999986653     123333333222 22335678999999999999999999999


Q ss_pred             eCCe-EEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhhc
Q psy14717         88 SDQD-ISICMEYMDGGSLDLILKKA--GKIPEHILGTITS  124 (125)
Q Consensus        88 ~~~~-~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~~  124 (125)
                      .++. ++|+|+||.||++.+.|+..  ..|+|+.+..|+.
T Consensus        74 ~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~  113 (426)
T KOG0589|consen   74 EDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFV  113 (426)
T ss_pred             cCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHH
Confidence            9998 99999999999999999875  4689998887753

>KOG0192|consensus

Probab=99.56  E-value=4.4e-15  Score=103.68  Aligned_cols=91  Identities=27%  Similarity=0.387  Sum_probs=70.3

Q ss_pred             CCCCchhHHHHHHH----HHhhcCCC-ccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC-eEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVD----RCLKKNPS-ERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ-DISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~----~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~-~~~iv~e~~~~GsL~~  106 (125)
                      |.|+||.||++.+.    .+++.... .........+.+|+.++..++|||||+++|++..+. ..+||||||++|+|..
T Consensus        50 G~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~  129 (362)
T KOG0192|consen   50 GSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSV  129 (362)
T ss_pred             ccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHH
Confidence            99999999987653    12222221 111112346889999999999999999999999988 7999999999999999


Q ss_pred             HHHH--cCCCCHHHHhhhh
Q psy14717        107 ILKK--AGKIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~--~~~l~~~~~~~~~  123 (125)
                      ++..  .+.++...+..++
T Consensus       130 ~l~~~~~~~l~~~~~l~~a  148 (362)
T KOG0192|consen  130 LLHKKRKRKLPLKVRLRIA  148 (362)
T ss_pred             HHhhcccCCCCHHHHHHHH
Confidence            9988  4678887766655

>KOG0194|consensus

Probab=99.54  E-value=3.8e-15  Score=106.28  Aligned_cols=94  Identities=26%  Similarity=0.387  Sum_probs=70.5

Q ss_pred             CCCCCCCchhHHHHHHH---------HHhhcCCC--ccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEe
Q psy14717         30 PKLPAGIFTDSFRDFVD---------RCLKKNPS--ERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEY   98 (125)
Q Consensus        30 ~~lg~g~fg~v~~~~~~---------~~~~~~~~--~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~   98 (125)
                      .+||+|.||.||+|...         .+++....  .........+.+|..+|+.++|+|||.++|+......++|+||+
T Consensus       163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl  242 (474)
T KOG0194|consen  163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMEL  242 (474)
T ss_pred             ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEe
Confidence            45599999999976432         12221121  11222334678999999999999999999999999999999999


Q ss_pred             cCCCCHHHHHHHcC-CCCHHHHhhhh
Q psy14717         99 MDGGSLDLILKKAG-KIPEHILGTIT  123 (125)
Q Consensus        99 ~~~GsL~~~l~~~~-~l~~~~~~~~~  123 (125)
                      |+||+|.++|+..+ .++......++
T Consensus       243 ~~gGsL~~~L~k~~~~v~~~ek~~~~  268 (474)
T KOG0194|consen  243 CNGGSLDDYLKKNKKSLPTLEKLRFC  268 (474)
T ss_pred             cCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence            99999999999975 37765544443

>KOG0615|consensus

Probab=99.54  E-value=4.2e-15  Score=103.13  Aligned_cols=88  Identities=18%  Similarity=0.207  Sum_probs=67.3

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCcc------ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCC
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSER------ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDG  101 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~------~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~  101 (125)
                      |+|.||.|-.++...     +.+....+.      ...+...+.+|+++|++++|||||+++++|..+...|+||||+.|
T Consensus       181 GsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~G  260 (475)
T KOG0615|consen  181 GSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEG  260 (475)
T ss_pred             cCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecC
Confidence            999999998765421     111111111      111333567999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHcCCCCHHHHh
Q psy14717        102 GSLDLILKKAGKIPEHILG  120 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~  120 (125)
                      |+|.+++-.++.+.|..-+
T Consensus       261 GeLfd~vv~nk~l~ed~~K  279 (475)
T KOG0615|consen  261 GELFDKVVANKYLREDLGK  279 (475)
T ss_pred             ccHHHHHHhccccccchhH
Confidence            9999999988888775543

>KOG0576|consensus

Probab=99.50  E-value=1.4e-15  Score=110.76  Aligned_cols=105  Identities=24%  Similarity=0.465  Sum_probs=82.8

Q ss_pred             CCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         11 VPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        11 ~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      ..+|.++|++++++        |+|+||.||++.+.     .+.+.+... ....-..+.+|+-+++.+.|+||+.+++.
T Consensus        10 rrnP~ddyellqrv--------gsgTygdvyKaRd~~s~elaavkvVkLe-p~dd~~~iqqei~~~~dc~h~nivay~gs   80 (829)
T KOG0576|consen   10 RRNPQDDYELLQRV--------GSGTYGDVYKARDKRSGELAAVKVVKLE-PGDDFSGIQQEIGMLRDCRHPNIVAYFGS   80 (829)
T ss_pred             hcCCccchhheeee--------cCCcccchhhhcccccCchhhheeeecc-CCccccccccceeeeecCCCcChHHHHhh
Confidence            33778899999999        99999999997653     122222211 11111135578989999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhhc
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITS  124 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~~  124 (125)
                      |...+.+||.||||.+|+|++.-..-++++|-++.++|.
T Consensus        81 ylr~dklwicMEycgggslQdiy~~TgplselqiayvcR  119 (829)
T KOG0576|consen   81 YLRRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCR  119 (829)
T ss_pred             hhhhcCcEEEEEecCCCcccceeeecccchhHHHHHHHh
Confidence            999999999999999999999887778999999888763

>KOG1026|consensus

Probab=99.50  E-value=6.1e-14  Score=104.02  Aligned_cols=90  Identities=18%  Similarity=0.233  Sum_probs=70.9

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .+..+.++++        |.|.||+||++...          .++|.-.....+..+.++.||+.++..++|+|||+++|
T Consensus       485 r~~i~~~~eL--------GegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlG  556 (774)
T KOG1026|consen  485 RSDIVFKEEL--------GEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLG  556 (774)
T ss_pred             hhheeehhhh--------cCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence            3455666777        99999999987542          22222222222234557999999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHcC
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKAG  112 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~~  112 (125)
                      +|..++..++|.|||..|+|.+||+.+.
T Consensus       557 VC~~~~P~~MvFEYm~~GDL~eFLra~s  584 (774)
T KOG1026|consen  557 VCREGDPLCMVFEYMDHGDLHEFLRARS  584 (774)
T ss_pred             EEccCCeeEEEEEecccccHHHHHHhhC
Confidence            9999999999999999999999999763

>KOG0600|consensus

Probab=99.49  E-value=5.3e-14  Score=99.72  Aligned_cols=103  Identities=22%  Similarity=0.294  Sum_probs=78.4

Q ss_pred             CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHh-hhHHHHHHHHHhcCCCceeeeeee
Q psy14717         12 PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKT-LSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      |...+.|+.+++|        |.|+||.||++...     .+++++......... .-..|||.|++++.||||+++.+.
T Consensus       113 ~r~~~~feki~kI--------GeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~ei  184 (560)
T KOG0600|consen  113 PRRADSFEKIEKI--------GEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEI  184 (560)
T ss_pred             ccchHHHHHHHHh--------cCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeE
Confidence            4456799999999        99999999996543     233333322111111 124589999999999999999999


Q ss_pred             EEeC--CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         86 FISD--QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~--~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ....  ..+|+|.|||+. +|..++... -.|++.+++-++
T Consensus       185 vt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~m  224 (560)
T KOG0600|consen  185 VTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYM  224 (560)
T ss_pred             EEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHH
Confidence            9887  679999999999 999999875 468998887554

>KOG4278|consensus

Probab=99.49  E-value=1.3e-14  Score=105.72  Aligned_cols=81  Identities=16%  Similarity=0.224  Sum_probs=66.0

Q ss_pred             CCCCCCchhHHHHHHHHHhh---cCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHH
Q psy14717         31 KLPAGIFTDSFRDFVDRCLK---KNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI  107 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~~~~~---~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~  107 (125)
                      +||.|.||.||.+++.+...   ....+..++...+++.|..+|+.++|||+|+++++|.....+|||+|||..|+|.+|
T Consensus       274 KLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdY  353 (1157)
T KOG4278|consen  274 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDY  353 (1157)
T ss_pred             ccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHH
Confidence            45999999999987742211   112233344445788999999999999999999999999999999999999999999


Q ss_pred             HHHc
Q psy14717        108 LKKA  111 (125)
Q Consensus       108 l~~~  111 (125)
                      |+.+
T Consensus       354 LRec  357 (1157)
T KOG4278|consen  354 LREC  357 (1157)
T ss_pred             HHHh
Confidence            9987

>KOG0610|consensus

Probab=99.46  E-value=7.6e-14  Score=96.98  Aligned_cols=102  Identities=21%  Similarity=0.257  Sum_probs=78.4

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-H-HhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-L-KTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-~-~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .+.|+++..+        |.|.-|.||.+...     .+.+.......+ . +-.+...|-+|+..++||.++.+|..|.
T Consensus        76 l~~f~llk~L--------G~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe  147 (459)
T KOG0610|consen   76 LRHFRLLKRL--------GCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFE  147 (459)
T ss_pred             HHHHHHHHHc--------CCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheee
Confidence            4578888888        99999999964321     122222221111 1 1224567889999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhhc
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA--GKIPEHILGTITS  124 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~~  124 (125)
                      .+...|++||||+||+|..++++.  +.|+++.+++++.
T Consensus       148 t~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaA  186 (459)
T KOG0610|consen  148 TDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAA  186 (459)
T ss_pred             ccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHH
Confidence            999999999999999999999875  6899999998863

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.46  E-value=3.8e-14  Score=98.09  Aligned_cols=101  Identities=48%  Similarity=0.625  Sum_probs=76.7

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|++.+.+        |.|+||.||++....     +.+.............+.+|+.+++.++|+||+++++++...
T Consensus         4 ~~~y~~~~~l--------g~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   75 (333)
T cd06650           4 DDDFEKISEL--------GAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD   75 (333)
T ss_pred             hhhhheeccc--------cCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC
Confidence            4578888888        999999999854321     111111111111223567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.++++|||+++|+|.++++..+.++++.+..++
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  109 (333)
T cd06650          76 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS  109 (333)
T ss_pred             CEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999987778887766554

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG1187|consensus

Probab=99.46  E-value=4.5e-14  Score=98.81  Aligned_cols=106  Identities=16%  Similarity=0.196  Sum_probs=80.1

Q ss_pred             HHHHHHHhhcCCC--CCCCCCCchhHHHHHHHH----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         17 IFELLDYIVNEPP--PKLPAGIFTDSFRDFVDR----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        17 ~~~~~~~i~~~~~--~~lg~g~fg~v~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      .|+.+...+++..  ..+|.|+||.||++....    ++++........ ..++.+|+.++..++|+|+++++|+|.+.+
T Consensus        66 s~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~  144 (361)
T KOG1187|consen   66 SYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGYCLEGG  144 (361)
T ss_pred             eHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEEEecCC
Confidence            6777888888877  689999999999865421    222111111110 335889999999999999999999999988


Q ss_pred             -eEEEEEEecCCCCHHHHHHHcC--CCCHHHHhhhh
Q psy14717         91 -DISICMEYMDGGSLDLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus        91 -~~~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~~  123 (125)
                       ...+|+|||++|||.+.|....  .+++..-.++|
T Consensus       145 ~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa  180 (361)
T KOG1187|consen  145 EHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIA  180 (361)
T ss_pred             ceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHH
Confidence             5999999999999999998764  67776655554

>KOG0584|consensus

Probab=99.46  E-value=8.3e-14  Score=100.67  Aligned_cols=93  Identities=16%  Similarity=0.288  Sum_probs=73.9

Q ss_pred             CCCCCchhHHHHHHH-------HHhhc-CCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe--EEEEEEecCC
Q psy14717         32 LPAGIFTDSFRDFVD-------RCLKK-NPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD--ISICMEYMDG  101 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-------~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~--~~iv~e~~~~  101 (125)
                      ||+|+|.+||++++.       ++..+ ....+......++..|+.+++.++|+||++++++|.+...  +-+|+|+|..
T Consensus        48 LGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TS  127 (632)
T KOG0584|consen   48 LGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTS  127 (632)
T ss_pred             cccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccC
Confidence            499999999998863       22111 1112222223467899999999999999999999988654  8899999999


Q ss_pred             CCHHHHHHHcCCCCHHHHhhhhc
Q psy14717        102 GSLDLILKKAGKIPEHILGTITS  124 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~~~~~  124 (125)
                      |+|..|+++++.++-+.++.||.
T Consensus       128 GtLr~Y~kk~~~vn~kaik~W~R  150 (632)
T KOG0584|consen  128 GTLREYRKKHRRVNIKAIKSWCR  150 (632)
T ss_pred             CcHHHHHHHhccCCHHHHHHHHH
Confidence            99999999999999999888873

>KOG0592|consensus

Probab=99.45  E-value=2.1e-13  Score=97.45  Aligned_cols=96  Identities=20%  Similarity=0.259  Sum_probs=77.1

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHhh------------hHHHHHHHHHhc-CCCceeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL------------SATTILKVLHEC-NFAHIVGF   82 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~~------------~~~~e~~~~~~~-~h~~iv~~   82 (125)
                      .+|...+.+        |.|+|++|+++..     +...+..+.+.+            -+.+|-.+|..+ +||.|+++
T Consensus        73 ~DF~Fg~~l--------GeGSYStV~~A~~-----~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkL  139 (604)
T KOG0592|consen   73 NDFKFGKIL--------GEGSYSTVVLARE-----KATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKL  139 (604)
T ss_pred             hhcchhhee--------ccccceeEEEeee-----cCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEE
Confidence            467777777        9999999998532     223222222211            244688888887 89999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhhc
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITS  124 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~~  124 (125)
                      +..|.+...+|+|+||+++|+|.++|++.+.|++.++++++.
T Consensus       140 y~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAA  181 (604)
T KOG0592|consen  140 YFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAA  181 (604)
T ss_pred             EEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHH
Confidence            999999999999999999999999999999999999998863

>KOG0582|consensus

Probab=99.44  E-value=4.9e-14  Score=98.76  Aligned_cols=104  Identities=21%  Similarity=0.262  Sum_probs=80.9

Q ss_pred             CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         12 PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      |.....|++.++|        |.|.-+.||.+...     .+++....+.++.....+.+|+..|+.++||||++++.+|
T Consensus        22 p~n~~~YeL~e~I--------G~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sF   93 (516)
T KOG0582|consen   22 PLNAKDYELQEVI--------GVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSF   93 (516)
T ss_pred             CCCccceeEEEEE--------eccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEE
Confidence            3444689999999        99988999987543     1222222233333333677999999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      ..++.+|+||+||.+||+.++++..  ..++|..++.+.
T Consensus        94 vv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iL  132 (516)
T KOG0582|consen   94 VVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATIL  132 (516)
T ss_pred             EecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHH
Confidence            9999999999999999999999986  568888876553

>KOG0583|consensus

Probab=99.43  E-value=1.3e-13  Score=96.70  Aligned_cols=102  Identities=18%  Similarity=0.210  Sum_probs=77.3

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc---cc-HHhhhHHHHHHHHHhcC-CCceeeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER---AD-LKTLSATTILKVLHECN-FAHIVGFY   83 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~---~~-~~~~~~~~e~~~~~~~~-h~~iv~~~   83 (125)
                      ....|++.+.+        |.|+||.|+.+.+.     .+.+....+.   .. .....+.+|+.+++.+. ||||++++
T Consensus        15 ~~g~y~~~~~l--------G~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~   86 (370)
T KOG0583|consen   15 SIGKYELGRTL--------GSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLL   86 (370)
T ss_pred             ccCceeeeeee--------cCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEE
Confidence            34566777777        99999999987553     1222111110   11 11123458999999998 99999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++..+..+++|||||.||+|.+++.+.++++|..+++++
T Consensus        87 ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F  126 (370)
T KOG0583|consen   87 EVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYF  126 (370)
T ss_pred             EEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHH
Confidence            9999999999999999999999999998899998887664

>KOG0198|consensus

Probab=99.42  E-value=2.5e-13  Score=92.95  Aligned_cols=99  Identities=26%  Similarity=0.417  Sum_probs=73.1

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      ..+...+.+        |+|+||.||.+....     +++..... .......+.+|+.++++++|||||+++|......
T Consensus        17 ~~~~~~~~l--------G~Gs~G~V~l~~~~~~g~~~AvK~v~~~-~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~   87 (313)
T KOG0198|consen   17 SNWSKGKLL--------GRGSFGSVYLATNKKTGELMAVKSVELE-DSPTSESLEREIRILSRLNHPNIVQYYGSSSSRE   87 (313)
T ss_pred             chhhhhccc--------cCccceEEEEEEecCCCcceeeeeeecc-cchhHHHHHHHHHHHHhCCCCCEEeeCCcccccc
Confidence            356666777        999999999854321     11111111 0011224678999999999999999999855544


Q ss_pred             --eEEEEEEecCCCCHHHHHHHcC-CCCHHHHhhhh
Q psy14717         91 --DISICMEYMDGGSLDLILKKAG-KIPEHILGTIT  123 (125)
Q Consensus        91 --~~~iv~e~~~~GsL~~~l~~~~-~l~~~~~~~~~  123 (125)
                        ..+|+|||+++|||.+++++.+ .++|..+++++
T Consensus        88 ~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~yt  123 (313)
T KOG0198|consen   88 NDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYT  123 (313)
T ss_pred             CeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHH
Confidence              6999999999999999999986 79999988775

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.42  E-value=1.1e-13  Score=97.32  Aligned_cols=102  Identities=20%  Similarity=0.128  Sum_probs=72.7

Q ss_pred             CCCCCCCCCC-CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHH
Q psy14717          2 DSISGSGSNV-PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKV   70 (125)
Q Consensus         2 ~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~   70 (125)
                      ||++-..+.. ..+.+.|++.+.|        |+|+||.||++...          .+++.............+.+|+.+
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~L--------G~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~i   91 (375)
T cd05104          20 DPTQLPYDHKWEFPRNRLSFGKTL--------GAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKV   91 (375)
T ss_pred             cCCCCCCccccccchHHeehhhee--------cCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHH
Confidence            5554443322 2345688888888        99999999875321          112211111111222356789999


Q ss_pred             HHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         71 LHEC-NFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        71 ~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      +..+ +||||+++++.+...+..+++||||++|+|.++++..
T Consensus        92 l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~  133 (375)
T cd05104          92 LSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRK  133 (375)
T ss_pred             HHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhc
Confidence            9998 8999999999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0201|consensus

Probab=99.42  E-value=2.7e-15  Score=104.54  Aligned_cols=100  Identities=24%  Similarity=0.461  Sum_probs=78.8

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .+...|+.++.|        |+|+||.||++....     +.+....+........+.+|+.++.++.++||..+|++|.
T Consensus        10 ~~~~~~~~~~~I--------grGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl   81 (467)
T KOG0201|consen   10 DPELLYTKLELI--------GRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYL   81 (467)
T ss_pred             Ccccccccchhc--------cccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhee
Confidence            345577888888        999999999987642     2233333333334446778999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKAGKIPEHILG  120 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~  120 (125)
                      .+..+||+||||.||++.++++....+.|..+.
T Consensus        82 ~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~  114 (467)
T KOG0201|consen   82 KGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIA  114 (467)
T ss_pred             ecccHHHHHHHhcCcchhhhhccCCCCccceee
Confidence            999999999999999999999986655765543

>KOG0578|consensus

Probab=99.42  E-value=3.6e-14  Score=101.44  Aligned_cols=91  Identities=20%  Similarity=0.343  Sum_probs=70.4

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      +|.|.-|.||.+....     +.+..... ...++..+.+|+.+|+..+|+|||.++++|...+.+|+|||||+||+|.+
T Consensus       281 igqgaSG~vy~A~~~~~~~~VaiK~m~l~-~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTD  359 (550)
T KOG0578|consen  281 IGQGATGGVYVARKISTKQEVAIKRMDLR-KQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTD  359 (550)
T ss_pred             hccccccceeeeeeccCCceEEEEEEEec-cCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhh
Confidence            4999999999754321     11111111 11222356789999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCHHHHhhhhc
Q psy14717        107 ILKKAGKIPEHILGTITS  124 (125)
Q Consensus       107 ~l~~~~~l~~~~~~~~~~  124 (125)
                      .+... .++|.+++.+|.
T Consensus       360 vVt~~-~~~E~qIA~Icr  376 (550)
T KOG0578|consen  360 VVTKT-RMTEGQIAAICR  376 (550)
T ss_pred             hhhcc-cccHHHHHHHHH
Confidence            99884 699999988875

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.42  E-value=8.4e-14  Score=97.75  Aligned_cols=99  Identities=20%  Similarity=0.224  Sum_probs=72.5

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccH-HhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADL-KTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~-~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .|++++.|        |.|+||.||++...     .+++...... ... ....+.+|+.++..++|+||+++++++.++
T Consensus         2 ~y~~~~~l--------G~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~   73 (377)
T cd05629           2 DFHTVKVI--------GKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDA   73 (377)
T ss_pred             CceEeEEE--------eecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC
Confidence            35556666        99999999974321     0111111100 001 112456799999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.+|++|||+++|+|.+++...+.+++..++.++
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~  107 (377)
T cd05629          74 QYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYM  107 (377)
T ss_pred             CeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999999987888888877654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.42  E-value=6.6e-14  Score=96.75  Aligned_cols=101  Identities=45%  Similarity=0.558  Sum_probs=76.0

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|+.+..+        |.|+||.||++...     .+++.............+.+|+.+++.++|+|++++++++...
T Consensus         4 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   75 (331)
T cd06649           4 DDDFERISEL--------GAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD   75 (331)
T ss_pred             cccceEEEee--------cCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC
Confidence            3467777777        99999999975432     1111111111111223577899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.++++|||+++|+|.++++....+++..+..++
T Consensus        76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  109 (331)
T cd06649          76 GEISICMEHMDGGSLDQVLKEAKRIPEEILGKVS  109 (331)
T ss_pred             CEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999987778887776554

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.41  E-value=1.1e-13  Score=97.35  Aligned_cols=99  Identities=16%  Similarity=0.276  Sum_probs=72.8

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCcc-cc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSER-AD-LKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~-~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .|+.++.|        |+|+||.||++....     +++...... .. .....+.+|+.++..++|+||+++++.+.+.
T Consensus         2 ~f~~~~~L--------G~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~   73 (381)
T cd05626           2 MFVKIKTL--------GIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDK   73 (381)
T ss_pred             CceEEEEE--------eecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecC
Confidence            35556667        999999999853311     111111110 00 1112466899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.+|++||||++|+|.+++.+.+.+++..++.++
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~  107 (381)
T cd05626          74 DNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYI  107 (381)
T ss_pred             CEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999999988788887766553

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0579|consensus

Probab=99.41  E-value=2.5e-13  Score=99.42  Aligned_cols=102  Identities=18%  Similarity=0.355  Sum_probs=77.5

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      |.+..+++..+        |.|.||.||++...     .+.+. .......+-..+.-|+.|+..|.||+|+.+++.|+.
T Consensus        30 P~d~WeIiGEL--------GDGAFGKVyKA~nket~~lAAaKv-IetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~  100 (1187)
T KOG0579|consen   30 PRDHWEIIGEL--------GDGAFGKVYKAVNKETKLLAAAKV-IETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYF  100 (1187)
T ss_pred             HHHHHHHHhhh--------cCccchhhhhhhcccchhhhhhhh-hcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc
Confidence            45567777777        99999999997542     11111 111111122256679999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhhc
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA-GKIPEHILGTITS  124 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~~  124 (125)
                      .+.+||+.|||.||-+...+-.- +.|++.+++.+|+
T Consensus       101 enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~  137 (1187)
T KOG0579|consen  101 ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCY  137 (1187)
T ss_pred             cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHH
Confidence            99999999999999999887764 6799999988875

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.41  E-value=1.2e-13  Score=97.17  Aligned_cols=98  Identities=17%  Similarity=0.290  Sum_probs=72.5

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      |+.++.|        |+|+||.||++....     +++.......  ......+.+|+.++..++|+||+++++.+.+++
T Consensus         3 f~~~~~L--------G~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~   74 (382)
T cd05625           3 FVKIKTL--------GIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD   74 (382)
T ss_pred             cEEEEEE--------EeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC
Confidence            5566667        999999999854311     1111111000  011124568999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+|+|||||++|+|.+++.+.+.+++..++.++
T Consensus        75 ~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~  107 (382)
T cd05625          75 NLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYI  107 (382)
T ss_pred             EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            999999999999999999887788888776654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.41  E-value=1.2e-13  Score=98.03  Aligned_cols=93  Identities=20%  Similarity=0.157  Sum_probs=69.4

Q ss_pred             CCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcC-CCce
Q psy14717         11 VPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECN-FAHI   79 (125)
Q Consensus        11 ~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~i   79 (125)
                      ...+.+.|++.+.|        |+|+||.||++...          .+++.............+.+|+.++..+. ||||
T Consensus        32 ~~~~~~~~~~~~~L--------G~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnI  103 (400)
T cd05105          32 WEFPRDGLVLGRIL--------GSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNI  103 (400)
T ss_pred             eeccccceehhhee--------cCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCe
Confidence            33445678888888        99999999975431          11222111111122235678999999995 9999


Q ss_pred             eeeeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         80 VGFYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        80 v~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      +++++++...+.+||+||||++|+|.+++.+.
T Consensus       104 v~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~  135 (400)
T cd05105         104 VNLLGACTKSGPIYIITEYCFYGDLVNYLHKN  135 (400)
T ss_pred             eeEEEEEccCCceEEEEEecCCCcHHHHHHHh
Confidence            99999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.40  E-value=1.2e-13  Score=96.96  Aligned_cols=99  Identities=17%  Similarity=0.260  Sum_probs=72.7

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .|++++.|        |.|+||.||++....     +++.......  ......+.+|+.+++.++|+||+++++.+..+
T Consensus         2 ~y~~~~~l--------G~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~   73 (376)
T cd05598           2 MFVKIKTI--------GIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK   73 (376)
T ss_pred             CceEEEEE--------EeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC
Confidence            45666777        999999999753210     1111110000  01112456899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.+|++||||++|+|.+++.+.+.+++..++.++
T Consensus        74 ~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~  107 (376)
T cd05598          74 DNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYI  107 (376)
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999999988788888776553

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0659|consensus

Probab=99.40  E-value=1.2e-13  Score=91.38  Aligned_cols=99  Identities=17%  Similarity=0.268  Sum_probs=75.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ..|..++++        |+|+||.||++.+.     .++++..... ..--.....||++.++.++|+||+.+.++|...
T Consensus         2 ~rY~~~~~l--------GEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~   73 (318)
T KOG0659|consen    2 DRYEKLEKL--------GEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHK   73 (318)
T ss_pred             chhhhhhhh--------cCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCC
Confidence            468888888        99999999996543     1222221111 111122567999999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ..+.||.|||+. +|+..|+.. ..++...++.|+
T Consensus        74 ~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~  107 (318)
T KOG0659|consen   74 SNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYM  107 (318)
T ss_pred             CceEEEEEeccc-cHHHHhcccccccCHHHHHHHH
Confidence            999999999999 999999986 467777777664

>KOG0593|consensus

Probab=99.40  E-value=6.3e-14  Score=94.46  Aligned_cols=97  Identities=15%  Similarity=0.269  Sum_probs=74.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHH-----------hhhHHHHHHHHHhcCCCceeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLK-----------TLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~-----------~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      |+.|+.+.++        |.|+||.||++.+     +...+.++.+           +....||++++++++|+|+|.+.
T Consensus         1 MekYE~Lgkv--------GEGSYGvV~KCrn-----k~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLi   67 (396)
T KOG0593|consen    1 MEKYEKLGKV--------GEGSYGVVMKCRN-----KDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLI   67 (396)
T ss_pred             CcHHhhhhcc--------ccCcceEEEEecc-----CCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHH
Confidence            5678888888        9999999999543     3333322221           12456999999999999999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhhc
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITS  124 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~~  124 (125)
                      ++|.....+++|.|||..--|.++-+....+++..++.+++
T Consensus        68 EVFrrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~  108 (396)
T KOG0593|consen   68 EVFRRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLY  108 (396)
T ss_pred             HHHHhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHH
Confidence            99999999999999999944444444447788888877654

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.40  E-value=9.5e-14  Score=96.93  Aligned_cols=99  Identities=20%  Similarity=0.251  Sum_probs=72.8

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCcc-c-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSER-A-DLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~-~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .|+.++.|        |.|+||.||++....     +++...... . ......+.+|+.++..++|+||+++++.+.++
T Consensus         2 ~y~~~~~l--------G~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~   73 (364)
T cd05599           2 DFESIKVI--------GRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDE   73 (364)
T ss_pred             CceEEEEE--------EecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC
Confidence            35556666        999999999753311     111111000 0 01112355799999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.+|++||||++|+|.+++...+.+++..++.++
T Consensus        74 ~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~  107 (364)
T cd05599          74 NYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYI  107 (364)
T ss_pred             CeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999987789988877654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0577|consensus

Probab=99.39  E-value=6.2e-14  Score=101.63  Aligned_cols=103  Identities=19%  Similarity=0.267  Sum_probs=83.5

Q ss_pred             CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcC--CCccccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         12 PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKN--PSERADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~--~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .+|...|+-++.|        |-|+||.||-+.+.     .++++.  .++....++..+..|+..++.+.|||+|.+.+
T Consensus        22 ~DPEklf~dLrEI--------GHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkg   93 (948)
T KOG0577|consen   22 DDPEKLFSDLREI--------GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKG   93 (948)
T ss_pred             CCHHHHHHHHHHh--------cCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccc
Confidence            3455678888999        99999999976653     233332  34556678888999999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +|....+.|+|||||-| |-.+++..+ .++.|-.|+.++
T Consensus        94 CyLre~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~  132 (948)
T KOG0577|consen   94 CYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAIT  132 (948)
T ss_pred             eeeccchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHH
Confidence            99999999999999999 999998876 577777666554

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.39  E-value=8.6e-13  Score=88.94  Aligned_cols=61  Identities=18%  Similarity=0.347  Sum_probs=51.9

Q ss_pred             hHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         63 SATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        63 ~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .+.+|+.+++.++|+||+++++++..+...++||||+++|+|..+++.. +.+++..+..++
T Consensus        62 ~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~  123 (274)
T cd05076          62 AFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVA  123 (274)
T ss_pred             HHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHH
Confidence            4557788888999999999999999999999999999999999999764 567877765544

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG0032|consensus

Probab=99.39  E-value=5.8e-13  Score=93.76  Aligned_cols=99  Identities=19%  Similarity=0.189  Sum_probs=74.3

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc--cHHhhhHHHHHHHHHhcC-CCceeeeeeeE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA--DLKTLSATTILKVLHECN-FAHIVGFYGAF   86 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~e~~~~~~~~-h~~iv~~~~~~   86 (125)
                      ...|++.+.+        |.|.||.||.+...     .+++.......  ......+.+|+.+|+.+. |||++.+++.|
T Consensus        34 ~~~Y~l~~~l--------G~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~  105 (382)
T KOG0032|consen   34 KEKYELGREL--------GRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAF  105 (382)
T ss_pred             cccEEehhhh--------CCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEE
Confidence            3467777777        99999999985332     11222111111  111235678999999998 99999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      .+...+++|||+|.||.|.+.|... +++|..+..+
T Consensus       106 e~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~  140 (382)
T KOG0032|consen  106 EDPDSVYLVMELCEGGELFDRIVKK-HYSERDAAGI  140 (382)
T ss_pred             EcCCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHH
Confidence            9999999999999999999999886 5888776654

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.38  E-value=1.6e-13  Score=93.87  Aligned_cols=98  Identities=51%  Similarity=0.662  Sum_probs=72.8

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeE
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDI   92 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~   92 (125)
                      |+..+.+        |.|+||.||++.+..     +++.............+.+|+.+++.++||||+++++.+..++.+
T Consensus         3 ~~~~~~l--------g~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   74 (308)
T cd06615           3 FEKLGEL--------GAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEI   74 (308)
T ss_pred             ceEEeec--------cCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEE
Confidence            4555666        999999999754321     111111111111223466899999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         93 SICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        93 ~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++|||+++|+|.+++++.+.+++..+..++
T Consensus        75 ~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~  105 (308)
T cd06615          75 SICMEHMDGGSLDQVLKKAGRIPENILGKIS  105 (308)
T ss_pred             EEEeeccCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999987788888776554

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.38  E-value=2e-13  Score=95.44  Aligned_cols=99  Identities=18%  Similarity=0.197  Sum_probs=73.1

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc--cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA--DLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +|+.++.|        |.|+||.||.+...     .+++.......  ......+.+|+.++..++|+||+++++.+.+.
T Consensus         2 ~y~~~~~L--------G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~   73 (363)
T cd05628           2 DFESLKVI--------GRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDK   73 (363)
T ss_pred             CceEeEEE--------EeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence            45666677        99999999975321     01111111000  01112456789999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..+|++||||++|+|.+++.+.+.+++..++.++
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~  107 (363)
T cd05628          74 LNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYI  107 (363)
T ss_pred             CeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999999988889988877654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.38  E-value=2.4e-13  Score=93.96  Aligned_cols=102  Identities=19%  Similarity=0.257  Sum_probs=76.2

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCcc-cc-HHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSER-AD-LKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~-~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      ..+.|++.+.|        |.|+||.||++....     +++...... .. .....+.+|+.+++.++||||+++++++
T Consensus        16 ~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~   87 (329)
T PTZ00263         16 KLSDFEMGETL--------GTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSF   87 (329)
T ss_pred             CchheEEEEEE--------EecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            34678888888        999999999854311     111110000 00 0112466899999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..++.+|++|||+++|+|.+++.+.+.+++..++.++
T Consensus        88 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  124 (329)
T PTZ00263         88 QDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYH  124 (329)
T ss_pred             EcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999999988888888776553

>KOG0580|consensus

Probab=99.37  E-value=6.3e-14  Score=91.52  Aligned_cols=102  Identities=18%  Similarity=0.216  Sum_probs=74.3

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccH--HhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADL--KTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~--~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      ..++|++-+.+        |.|.||.||.+....     +++..-..+...  -..++.+|+++.+.++||||++++++|
T Consensus        20 ~l~dfeigr~L--------gkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f   91 (281)
T KOG0580|consen   20 TLDDFEIGRPL--------GKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF   91 (281)
T ss_pred             chhhccccccc--------cCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe
Confidence            34577777777        999999999865321     111111111000  111467899999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHH--HcCCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILK--KAGKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~--~~~~l~~~~~~~~~  123 (125)
                      .+...+|+++||.+.|+|+..|.  ....++|+..+.+.
T Consensus        92 hd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi  130 (281)
T KOG0580|consen   92 HDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYI  130 (281)
T ss_pred             eccceeEEEEEecCCchHHHHHHhcccccccccchhHHH
Confidence            99999999999999999999999  44667777665443

>KOG0612|consensus

Probab=99.37  E-value=2.7e-13  Score=103.48  Aligned_cols=96  Identities=25%  Similarity=0.282  Sum_probs=75.7

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHh------------hhHHHHHHHHHhcCCCceeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKT------------LSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~------------~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      .++|+++..|        |+|.||.|....     .+...+..+++.            .-+..|-.+|-..+.+.|+++
T Consensus        74 ~~DfeilKvI--------GrGaFGEV~lVr-----~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~L  140 (1317)
T KOG0612|consen   74 AEDFEILKVI--------GRGAFGEVALVR-----HKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQL  140 (1317)
T ss_pred             HHhhHHHHHh--------cccccceeEEEE-----eeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHH
Confidence            4689999999        999999998522     112222222211            124456678888889999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +..|.++..+|+|||||+||+|..++.+..++||.++++|+
T Consensus       141 hyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~  181 (1317)
T KOG0612|consen  141 HYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYT  181 (1317)
T ss_pred             HHHhcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHH
Confidence            99999999999999999999999999998889999999886

>KOG0588|consensus

Probab=99.36  E-value=1e-12  Score=96.04  Aligned_cols=94  Identities=16%  Similarity=0.234  Sum_probs=74.9

Q ss_pred             CCCCCCCchhHHHHHHH-----HHhhcCCCcc--ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         30 PKLPAGIFTDSFRDFVD-----RCLKKNPSER--ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        30 ~~lg~g~fg~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      .+||.|+-|.|-.+.++     ++++.++...  ....-..+.+|+.+|+-+.|||++.++++|+++..+|++.||+++|
T Consensus        18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gG   97 (786)
T KOG0588|consen   18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGG   97 (786)
T ss_pred             ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCc
Confidence            34599999999998774     2333333321  1112235778999999999999999999999999999999999999


Q ss_pred             CHHHHHHHcCCCCHHHHhhhh
Q psy14717        103 SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .|++++.++++++|+.+++++
T Consensus        98 ELFdylv~kG~l~e~eaa~ff  118 (786)
T KOG0588|consen   98 ELFDYLVRKGPLPEREAAHFF  118 (786)
T ss_pred             hhHHHHHhhCCCCCHHHHHHH
Confidence            999999999999998877654

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.36  E-value=6e-13  Score=92.51  Aligned_cols=101  Identities=16%  Similarity=0.286  Sum_probs=74.9

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH------HHhhcCCCcc--ccHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD------RCLKKNPSER--ADLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~------~~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      .+.|++++.|        |.|+||.||++...      .+++......  .......+.+|+.++..++||||+++++++
T Consensus        29 ~~~y~~~~~i--------g~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~  100 (340)
T PTZ00426         29 YEDFNFIRTL--------GTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSF  100 (340)
T ss_pred             hhhcEEEEEE--------eecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEE
Confidence            3567777788        99999999985321      0111110000  001112456799999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ...+.+|++|||+++|+|.+++...+.+++..+..++
T Consensus       101 ~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~  137 (340)
T PTZ00426        101 KDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYA  137 (340)
T ss_pred             EeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999999988889988776554

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.36  E-value=9.2e-13  Score=91.10  Aligned_cols=91  Identities=18%  Similarity=0.212  Sum_probs=66.6

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHH----------HHHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFV----------DRCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVG   81 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~----------~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~   81 (125)
                      .+.+.|++.+.|        |.|+||.||++..          ..+++.............+.+|+.++..+ +||||++
T Consensus         4 ~~~~~~~~~~~l--------G~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~   75 (338)
T cd05102           4 FPRDRLRLGKVL--------GHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVN   75 (338)
T ss_pred             cchhHceeeeEe--------ccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceee
Confidence            345678888888        9999999997631          12222222211112223567899999998 8999999


Q ss_pred             eeeeEEeC-CeEEEEEEecCCCCHHHHHHHc
Q psy14717         82 FYGAFISD-QDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        82 ~~~~~~~~-~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      +++.+... ..++++|||+++|+|.++++..
T Consensus        76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~  106 (338)
T cd05102          76 LLGACTKPNGPLMVIVEFCKYGNLSNFLRAK  106 (338)
T ss_pred             EEeEecCCCCceEEEEecCCCCcHHHHHHhc
Confidence            99988764 4589999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.36  E-value=1.6e-13  Score=93.19  Aligned_cols=99  Identities=18%  Similarity=0.184  Sum_probs=72.6

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCcc-ccH-HhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSER-ADL-KTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~-~~~-~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .|++.+.|        |.|+||.||++....     +++...... ... ....+.+|+.+++.++||||+++++.+.+.
T Consensus         2 ~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   73 (291)
T cd05612           2 DLERIKTV--------GTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQ   73 (291)
T ss_pred             Cceeeeee--------ecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccC
Confidence            35556666        999999999854321     111111000 011 112456899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.++++|||+++|+|.++++..+.+++..+..++
T Consensus        74 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~  107 (291)
T cd05612          74 RFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYA  107 (291)
T ss_pred             CeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999988888888766544

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.36  E-value=3.5e-13  Score=90.31  Aligned_cols=100  Identities=19%  Similarity=0.270  Sum_probs=72.4

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      ..|++.+.|        |+|+||.||++...        .+++.............+.+|+..+..++|||++++++.+.
T Consensus         5 ~~~~~~~~i--------g~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   76 (266)
T cd05064           5 KSIKIERIL--------GTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT   76 (266)
T ss_pred             HHeEEeeee--------cccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe
Confidence            355666666        99999999976321        11111111111112235668999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .++.++++|||+++|+|.+++... ..+++..+..++
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~  113 (266)
T cd05064          77 RGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGML  113 (266)
T ss_pred             cCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence            999999999999999999999875 467877766543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG4257|consensus

Probab=99.34  E-value=1.3e-12  Score=95.35  Aligned_cols=102  Identities=18%  Similarity=0.252  Sum_probs=72.5

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH---------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR---------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      ...+...+.+.|        |.|.||.||++..+.         +++.....-...+...+.+|..+|+...||||+++.
T Consensus       386 l~Re~Itl~r~i--------G~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLI  457 (974)
T KOG4257|consen  386 LRRELITLKRLI--------GEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLI  457 (974)
T ss_pred             eehhhccHHHhh--------cCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhhee
Confidence            334455555666        999999999886531         122111111122344678999999999999999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      |++... .+|||||+++.|.|..|+.++ ..++-..+..+|
T Consensus       458 Gv~~e~-P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~  497 (974)
T KOG4257|consen  458 GVCVEQ-PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYC  497 (974)
T ss_pred             eeeecc-ceeEEEecccchhHHHHHHhccccchHHHHHHHH
Confidence            998655 589999999999999999986 356655554444

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=1.6e-12  Score=87.56  Aligned_cols=102  Identities=24%  Similarity=0.443  Sum_probs=77.2

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      +|.+.|++++.+        |.|+||.||++....     +++..... .......+.+|+.+++.++|+|++++++.+.
T Consensus         2 ~~~~~~~i~~~l--------~~g~~~~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   72 (280)
T cd06611           2 NPNDIWEIIGEL--------GDGAFGKVYKAQHKETGLFAAAKIIQIE-SEEELEDFMVEIDILSECKHPNIVGLYEAYF   72 (280)
T ss_pred             CchhHHHHHHHh--------cCCCCceEEEEEEcCCCcEEEEEEEeeC-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEe
Confidence            356789999999        999999999864321     11111100 1112224668999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .+...|++|||+++|+|.+++... ..+++..++.++
T Consensus        73 ~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~  109 (280)
T cd06611          73 YENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVC  109 (280)
T ss_pred             cCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHH
Confidence            999999999999999999999874 468887776654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.34  E-value=1.2e-12  Score=88.46  Aligned_cols=101  Identities=35%  Similarity=0.478  Sum_probs=76.7

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|++++.|        |+|+||.||++....     +.+.............+.+|+++++.++|+|++++++.+...
T Consensus         4 ~~~~~~~~~i--------g~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   75 (284)
T cd06620           4 NEDLETISDL--------GAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNE   75 (284)
T ss_pred             HHHHHHHHHc--------CCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecC
Confidence            4689999999        999999999754321     111111111111223567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +..+++|||+++|+|.+++...+.+++..+..++
T Consensus        76 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~  109 (284)
T cd06620          76 NNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIA  109 (284)
T ss_pred             CEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHH
Confidence            9999999999999999999887778887776554

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=4.9e-13  Score=92.38  Aligned_cols=98  Identities=20%  Similarity=0.268  Sum_probs=72.2

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      |++++.|        |.|+||.||++....     +++.......  ......+.+|+.++..+.|+||+++++.+...+
T Consensus         3 y~~~~~i--------g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~   74 (333)
T cd05600           3 FQILTQV--------GQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE   74 (333)
T ss_pred             cEEEEEE--------eecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC
Confidence            4556666        999999999854321     1111111100  011224567999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+|++|||+++|+|.++++..+.+++..++.++
T Consensus        75 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~  107 (333)
T cd05600          75 YLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYM  107 (333)
T ss_pred             EEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence            999999999999999999987788887776554

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.34  E-value=5.6e-13  Score=93.10  Aligned_cols=98  Identities=19%  Similarity=0.244  Sum_probs=71.5

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCc-cc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSE-RA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~-~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      |+.++.|        |.|+||.||.+....     +++..... .. ......+.+|+.++..++|++++++++.+.+.+
T Consensus         3 f~~~~~l--------G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~   74 (360)
T cd05627           3 FESLKVI--------GRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR   74 (360)
T ss_pred             ceEEEEE--------eeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence            4555666        999999999743210     11111100 00 011124567899999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+|++||||++|+|.+++.+.+.+++..++.++
T Consensus        75 ~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~  107 (360)
T cd05627          75 NLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYI  107 (360)
T ss_pred             EEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHH
Confidence            999999999999999999888889988877654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0586|consensus

Probab=99.34  E-value=9.2e-13  Score=95.09  Aligned_cols=90  Identities=19%  Similarity=0.240  Sum_probs=71.0

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCccccH-HhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSERADL-KTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      ||+|.|++|..+.+.     .+.+.......+. ....+.+|+.+|..+.|||||+++.+...+..+|+||||+.+|.++
T Consensus        64 ig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~  143 (596)
T KOG0586|consen   64 IGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELF  143 (596)
T ss_pred             eccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhH
Confidence            499999999987653     2333333322222 2234679999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCHHHHhh
Q psy14717        106 LILKKAGKIPEHILGT  121 (125)
Q Consensus       106 ~~l~~~~~l~~~~~~~  121 (125)
                      +++..++++.+..++.
T Consensus       144 ~yl~~~gr~~e~~ar~  159 (596)
T KOG0586|consen  144 DYLVKHGRMKEKEARA  159 (596)
T ss_pred             HHHHhcccchhhhhhh
Confidence            9999998888855543

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.34  E-value=1.9e-12  Score=88.79  Aligned_cols=92  Identities=18%  Similarity=0.217  Sum_probs=67.8

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCcc--ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSER--ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      ||+|+||.||++...     .+++......  .......+.+|+.++..++||||+++++.+..++.+|++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            489999999975431     0111111000  011122456799999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHhhhh
Q psy14717        105 DLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+++...+.+++..++.++
T Consensus        81 ~~~l~~~~~~~~~~~~~~~   99 (312)
T cd05585          81 FHHLQREGRFDLSRARFYT   99 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHH
Confidence            9999887788887776554

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.33  E-value=1e-12  Score=92.34  Aligned_cols=90  Identities=20%  Similarity=0.195  Sum_probs=67.3

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGF   82 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~   82 (125)
                      +.+.|++.+.+        |.|+||.||++...          .+++.............+.+|+.+++.+ .|+||+++
T Consensus        36 ~~~~~~~~~~L--------G~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~  107 (374)
T cd05106          36 PRDNLQFGKTL--------GAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNL  107 (374)
T ss_pred             cHHHceehhee--------cCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeE
Confidence            45678888888        99999999975321          1222222111112223466899999998 89999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++.+.....++++||||++|+|.+++...
T Consensus       108 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~  136 (374)
T cd05106         108 LGACTHGGPVLVITEYCCYGDLLNFLRKK  136 (374)
T ss_pred             eeEecCCCCeEEeHhhccCCcHHHHHHhh
Confidence            99999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG1094|consensus

Probab=99.33  E-value=3.1e-13  Score=97.74  Aligned_cols=91  Identities=20%  Similarity=0.296  Sum_probs=70.3

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      .+.+.+...++|        |+|.||+|..+-+..    +.+.-........+..+.+|+++|.+++||||+.+.++|..
T Consensus       535 fPRs~L~~~eki--------GeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~  606 (807)
T KOG1094|consen  535 FPRSRLRFKEKI--------GEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ  606 (807)
T ss_pred             cchhheehhhhh--------cCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec
Confidence            345567777888        999999998754432    11211111111223478899999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++.+++++|||.+|+|.+++..+
T Consensus       607 DePicmI~EYmEnGDLnqFl~ah  629 (807)
T KOG1094|consen  607 DDPLCMITEYMENGDLNQFLSAH  629 (807)
T ss_pred             CCchHHHHHHHhcCcHHHHHHhc
Confidence            99999999999999999999986

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.32  E-value=1.3e-12  Score=92.72  Aligned_cols=91  Identities=21%  Similarity=0.201  Sum_probs=68.1

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcC-CCceee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECN-FAHIVG   81 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~iv~   81 (125)
                      .+.+.|.+.+.|        |.|+||.||++.+.          .+++.............+.+|+.++..+. |+||++
T Consensus        34 ~~~~~~~~~~~l--------G~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~  105 (401)
T cd05107          34 MPRDNLVLGRTL--------GSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVN  105 (401)
T ss_pred             ecHHHeehhhhc--------cCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEE
Confidence            445677777788        99999999986421          12222221111112224668999999996 999999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      +++.+.....++++||||++|+|.++++..
T Consensus       106 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~  135 (401)
T cd05107         106 LLGACTKGGPIYIITEYCRYGDLVDYLHRN  135 (401)
T ss_pred             EEEEEccCCCcEEEEeccCCCcHHHHHHhc
Confidence            999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.32  E-value=2.5e-12  Score=88.64  Aligned_cols=92  Identities=20%  Similarity=0.204  Sum_probs=68.3

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCcc--ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSER--ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      ||+|+||.||++...     .+++......  .........+|+.++..++||||+.+++.+...+.+|++|||+++|+|
T Consensus         3 lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L   82 (323)
T cd05571           3 LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGEL   82 (323)
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcH
Confidence            599999999974321     0111111100  001112456799999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHhhhh
Q psy14717        105 DLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+++...+.+++..++.++
T Consensus        83 ~~~l~~~~~~~~~~~~~~~  101 (323)
T cd05571          83 FFHLSRERVFSEDRARFYG  101 (323)
T ss_pred             HHHHHHcCCCCHHHHHHHH
Confidence            9999988888988877654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.31  E-value=8.7e-13  Score=89.97  Aligned_cols=89  Identities=16%  Similarity=0.213  Sum_probs=66.1

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---------------------HHhhcCCCccccHHhhhHHHHHHHHHh
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---------------------RCLKKNPSERADLKTLSATTILKVLHE   73 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~e~~~~~~   73 (125)
                      .+.|++.++|        |+|+||.||++.+.                     .+++.............+.+|+.++..
T Consensus         4 ~~~~~~~~~l--------g~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~   75 (304)
T cd05096           4 RGHLLFKEKL--------GEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSR   75 (304)
T ss_pred             hhhCeeeeEe--------cccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhh
Confidence            4567777777        99999999975321                     011111111111122356789999999


Q ss_pred             cCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         74 CNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        74 ~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++|+||+++++++...+..+++|||+.+|+|.+++...
T Consensus        76 l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  113 (304)
T cd05096          76 LKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSH  113 (304)
T ss_pred             cCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhc
Confidence            99999999999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.31  E-value=3.1e-12  Score=86.12  Aligned_cols=99  Identities=26%  Similarity=0.482  Sum_probs=74.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ...|+.++.+        |.|+||.||.+....     +++.............+.+|+.+++.+.|+|++++++.+.++
T Consensus         3 ~~~y~~~~~l--------g~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   74 (277)
T cd06640           3 EELFTKLERI--------GKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG   74 (277)
T ss_pred             HHhhhhhhhc--------ccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence            4567888888        999999999864321     122111111122233567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      +..+++|||+++|+|.++++. +.+++..+..+
T Consensus        75 ~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~  106 (277)
T cd06640          75 TKLWIIMEYLGGGSALDLLRA-GPFDEFQIATM  106 (277)
T ss_pred             CEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHH
Confidence            999999999999999999976 56777665543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>KOG0663|consensus

Probab=99.30  E-value=2.9e-12  Score=87.44  Aligned_cols=100  Identities=17%  Similarity=0.279  Sum_probs=72.8

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHh------hhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKT------LSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~------~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      ..+.|+.+.+|        +.|+||.||++.+...-.....++...+.      ....||+.++.+++|||||.+..++.
T Consensus        74 sv~efe~lnrI--------~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVv  145 (419)
T KOG0663|consen   74 SVEEFEKLNRI--------EEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVV  145 (419)
T ss_pred             cHHHHHHHhhc--------ccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEe
Confidence            34688999999        99999999997653211111111111111      13568999999999999999999887


Q ss_pred             eC--CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhh
Q psy14717         88 SD--QDISICMEYMDGGSLDLILKKA-GKIPEHILGTI  122 (125)
Q Consensus        88 ~~--~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~  122 (125)
                      ..  +.+|||||||.. +|..++..- .+|....++.+
T Consensus       146 G~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L  182 (419)
T KOG0663|consen  146 GSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTL  182 (419)
T ss_pred             ccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHH
Confidence            64  469999999999 999999875 47777666544

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.30  E-value=3.4e-12  Score=86.70  Aligned_cols=89  Identities=17%  Similarity=0.278  Sum_probs=67.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-------------------HhhcCCCccccHHhhhHHHHHHHHHhcC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-------------------CLKKNPSERADLKTLSATTILKVLHECN   75 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~e~~~~~~~~   75 (125)
                      ...|++.++|        |+|+||.||.+....                   +++.............+.+|+.++..+.
T Consensus         4 ~~~~~~~~~l--------g~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~   75 (295)
T cd05097           4 RQQLRLKEKL--------GEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLK   75 (295)
T ss_pred             hHhCeehhcc--------CCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCC
Confidence            4578888888        999999999764321                   1111111111112235678999999999


Q ss_pred             CCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         76 FAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        76 h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      |+|++++++.+...+.++++|||+++|+|.+++...
T Consensus        76 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  111 (295)
T cd05097          76 NPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQR  111 (295)
T ss_pred             CCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhc
Confidence            999999999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.30  E-value=8.7e-12  Score=83.39  Aligned_cols=101  Identities=24%  Similarity=0.500  Sum_probs=77.0

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      +.+.|+..+.+        |.|+||.||.+....     +++..... .......+.+|+.+++.++|||++++++.+..
T Consensus         7 ~~~~~~~~~~l--------g~g~~~~v~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~   77 (267)
T cd06645           7 PQEDFELIQRI--------GSGTYGDVYKARNVNTGELAAIKVIKLE-PGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLR   77 (267)
T ss_pred             cHHHHHHHHHh--------CCCCCeEEEEEEEcCCCcEEEEEEEecC-chhHHHHHHHHHHHHHhCCCCCeeeEEEEEEe
Confidence            45689999999        999999999854321     11111111 01112235678999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+.+|++|||+++|+|.+++...+.+++..+..++
T Consensus        78 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~  112 (267)
T cd06645          78 RDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVS  112 (267)
T ss_pred             CCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            99999999999999999999888888988776553

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.30  E-value=3.1e-12  Score=88.24  Aligned_cols=92  Identities=21%  Similarity=0.211  Sum_probs=67.9

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCcc--ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSER--ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      ||.|+||.||++...     .+++......  .......+.+|+.+++.++|||++++++.+...+.+|++|||+++|+|
T Consensus         3 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L   82 (323)
T cd05595           3 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL   82 (323)
T ss_pred             eeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcH
Confidence            599999999974321     0111111100  001112345789999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHhhhh
Q psy14717        105 DLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..++...+.+++..++.++
T Consensus        83 ~~~l~~~~~~~~~~~~~~~  101 (323)
T cd05595          83 FFHLSRERVFTEERARFYG  101 (323)
T ss_pred             HHHHHHcCCCCHHHHHHHH
Confidence            9999887788988877654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.30  E-value=4.2e-12  Score=84.91  Aligned_cols=101  Identities=25%  Similarity=0.464  Sum_probs=75.8

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      +...|++.+.+        |+|+||.||++...     .+++..... .......+.+|+.+++.+.|+|++++++.+..
T Consensus         7 ~~~~y~~~~~l--------g~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~   77 (267)
T cd06646           7 PQHDYELIQRV--------GSGTYGDVYKARNLHTGELAAVKIIKLE-PGDDFSLIQQEIFMVKECKHCNIVAYFGSYLS   77 (267)
T ss_pred             chhhcchhhee--------ecCCCeEEEEEEECCCCeEEEEEEEecC-ccchHHHHHHHHHHHHhcCCCCeeeeeEEEEe
Confidence            34578888888        99999999986431     111111111 11111245679999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+..|++|||+++|+|.+++.+.+.+++..+..++
T Consensus        78 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~  112 (267)
T cd06646          78 REKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVC  112 (267)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            99999999999999999999877778887766544

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.29  E-value=2.1e-12  Score=86.43  Aligned_cols=100  Identities=22%  Similarity=0.329  Sum_probs=73.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      +.|+..+.+        |.|+||.||++.+.        .+++.............+.+|+.+++.++|+|++++++.+.
T Consensus         4 ~~~~~~~~l--------g~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   75 (266)
T cd05033           4 SYVTIEKVI--------GGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVT   75 (266)
T ss_pred             HHceeeeEe--------cCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEe
Confidence            356666777        99999999986432        11222221111222335668999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ..+.++++|||+++|+|.+++... +.+++..+..++
T Consensus        76 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  112 (266)
T cd05033          76 KSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGML  112 (266)
T ss_pred             cCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHH
Confidence            999999999999999999999875 467777665543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.29  E-value=2e-12  Score=86.78  Aligned_cols=100  Identities=13%  Similarity=0.174  Sum_probs=73.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH----------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR----------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .+.|+.++.+        |.|+||.||++....          +++.............+.+|+.++..+.|+|++++++
T Consensus         4 ~~~~~~~~~l--------g~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   75 (275)
T cd05046           4 RSNLQEITTL--------GRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLG   75 (275)
T ss_pred             hHhceeeeee--------cccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEE
Confidence            4577777888        999999999865321          1111111111112235678999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHcC---------CCCHHHHhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKAG---------KIPEHILGTI  122 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~~---------~l~~~~~~~~  122 (125)
                      .+...+..|++|||+++|+|.+++....         .+++..+..+
T Consensus        76 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~  122 (275)
T cd05046          76 LCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVAL  122 (275)
T ss_pred             EECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHH
Confidence            9988889999999999999999998765         5777766554

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0587|consensus

Probab=99.28  E-value=1.8e-12  Score=96.94  Aligned_cols=105  Identities=25%  Similarity=0.514  Sum_probs=76.4

Q ss_pred             CCCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----Hhhc-CCCccccHHhhhHHHHHHHHHh-cCCCceee
Q psy14717          9 SNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKK-NPSERADLKTLSATTILKVLHE-CNFAHIVG   81 (125)
Q Consensus         9 ~~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~-~~~~~~~~~~~~~~~e~~~~~~-~~h~~iv~   81 (125)
                      +..|++.+.+++.+.|        |.|++|.||++....     +.+. ....   ....+...|..+++. .+|||++.
T Consensus        12 ~~lpdp~d~~ei~evi--------g~Gtygkv~k~k~~~~~~~aa~kI~~~~~---d~deEiE~eynil~~~~~hpnv~~   80 (953)
T KOG0587|consen   12 SSLPDPADIFEIIEVI--------GNGTYGKVYKGRHVKTGQLAAIKIMDPTE---DEEEEIELEYNMLKKYSHHPNVAT   80 (953)
T ss_pred             hhCCCCCCccEEEEEE--------eeccceeEEEEeeeecCceeeeEeecCCc---cccHHHHHHHHHHHhccCCCCcce
Confidence            3456667788898999        999999999854321     1111 1111   111244557778877 58999999


Q ss_pred             eeeeEEe-----CCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhhc
Q psy14717         82 FYGAFIS-----DQDISICMEYMDGGSLDLILKKA--GKIPEHILGTITS  124 (125)
Q Consensus        82 ~~~~~~~-----~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~~  124 (125)
                      ++++|..     ++.+|+|||||.+||+.++++.-  +.+.|..+++++.
T Consensus        81 fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~r  130 (953)
T KOG0587|consen   81 FYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILR  130 (953)
T ss_pred             EEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHH
Confidence            9999976     45799999999999999999875  5788888887753

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.28  E-value=7.4e-12  Score=83.40  Aligned_cols=101  Identities=21%  Similarity=0.313  Sum_probs=75.9

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      .+...|++++.+        |.|+||.||++....    +++..... .......+.+|+.+++.++|+|++++++.+..
T Consensus         3 ~~~~~y~~~~~i--------g~g~~~~vy~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   73 (261)
T cd05148           3 RPREEFTLERKL--------GSGYFGEVWEGLWKNRVRVAIKILKSD-DLLKQQDFQKEVQALKRLRHKHLISLFAVCSV   73 (261)
T ss_pred             CcHHHHHHhhhh--------ccCCCccEEEeEecCCCcEEEEecccc-chhhHHHHHHHHHHHhcCCCcchhheeeeEec
Confidence            456789999999        999999999865421    11111111 11122356689999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA--GKIPEHILGTI  122 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~  122 (125)
                      ....+++|||+++|+|.+++...  ..+++..+..+
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  109 (261)
T cd05148          74 GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDM  109 (261)
T ss_pred             CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHH
Confidence            99999999999999999999864  35676665554

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG1095|consensus

Probab=99.27  E-value=1.2e-12  Score=100.17  Aligned_cols=80  Identities=19%  Similarity=0.319  Sum_probs=63.0

Q ss_pred             CCCCCchhHHHHHHHH--------HhhcCCCccc--cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCC
Q psy14717         32 LPAGIFTDSFRDFVDR--------CLKKNPSERA--DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDG  101 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~--------~~~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~  101 (125)
                      ||.|.||.||.+...-        .+..+...+.  ..+...+.+|..+|+..+||||+++.|++.+....+|++|||.+
T Consensus       700 lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~g  779 (1025)
T KOG1095|consen  700 LGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEG  779 (1025)
T ss_pred             eccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhccc
Confidence            4999999999865320        0111112221  23445788999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHc
Q psy14717        102 GSLDLILKKA  111 (125)
Q Consensus       102 GsL~~~l~~~  111 (125)
                      |+|..||+..
T Consensus       780 GDL~sflr~~  789 (1025)
T KOG1095|consen  780 GDLLSFLRES  789 (1025)
T ss_pred             CcHHHHHHhc
Confidence            9999999986

>KOG1151|consensus

Probab=99.27  E-value=1.5e-11  Score=87.12  Aligned_cols=104  Identities=21%  Similarity=0.312  Sum_probs=79.3

Q ss_pred             CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcC-CCccccH-----HhhhHHHHHHHHHhcCCCcee
Q psy14717         12 PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKN-PSERADL-----KTLSATTILKVLHECNFAHIV   80 (125)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~-~~~~~~~-----~~~~~~~e~~~~~~~~h~~iv   80 (125)
                      |-..++|-++..+        |+|+|++||++++.     .+++.. ..+-+..     ......+|..+.+.+.||-||
T Consensus       459 ptLn~RYLlLhLL--------GrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIV  530 (775)
T KOG1151|consen  459 PTLNDRYLLLHLL--------GRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIV  530 (775)
T ss_pred             cchHHHHHHHHHh--------ccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceee
Confidence            4455688888999        99999999999863     122211 1111111     112456899999999999999


Q ss_pred             eeeeeEE-eCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         81 GFYGAFI-SDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        81 ~~~~~~~-~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++|++|. +.+.+|-|+|||+|.+|.-||++++.++|+.++.+.
T Consensus       531 KlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIi  574 (775)
T KOG1151|consen  531 KLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSII  574 (775)
T ss_pred             eeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHH
Confidence            9999996 566799999999999999999999999998877553

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.27  E-value=1.4e-11  Score=82.15  Aligned_cols=92  Identities=24%  Similarity=0.241  Sum_probs=66.2

Q ss_pred             CCCCCCchhHHHHHHH------------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEe
Q psy14717         31 KLPAGIFTDSFRDFVD------------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEY   98 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~   98 (125)
                      .||.|+||.||++...            .+.+..... .......+..|+.+++.+.|||++.+++.+..+...+++|||
T Consensus         2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~   80 (258)
T cd05078           2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS-HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY   80 (258)
T ss_pred             CCCcccchhheeeeecccccccccccchhhHHhhcch-hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence            3599999999986532            111111111 111122456788899999999999999999998899999999


Q ss_pred             cCCCCHHHHHHHcC-CCCHHHHhhhh
Q psy14717         99 MDGGSLDLILKKAG-KIPEHILGTIT  123 (125)
Q Consensus        99 ~~~GsL~~~l~~~~-~l~~~~~~~~~  123 (125)
                      +++|+|.+++...+ .+++..+..++
T Consensus        81 ~~~g~L~~~l~~~~~~~~~~~~~~~~  106 (258)
T cd05078          81 VKFGSLDTYLKKNKNLINISWKLEVA  106 (258)
T ss_pred             CCCCcHHHHHhcCCCCCCHHHHHHHH
Confidence            99999999998753 46776665443

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0690|consensus

Probab=99.27  E-value=1.2e-12  Score=89.44  Aligned_cols=97  Identities=20%  Similarity=0.304  Sum_probs=77.3

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH------------HhhhHHHHHHHHHhcCCCceee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL------------KTLSATTILKVLHECNFAHIVG   81 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~~~~~~~~h~~iv~   81 (125)
                      -+++|+.+..+        |.|+||.|..+     ..+...+..+.            +...-+.|-.++..+.||.+..
T Consensus       166 Tm~dFdfLKvL--------GkGTFGKVIL~-----rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~  232 (516)
T KOG0690|consen  166 TMEDFDFLKVL--------GKGTFGKVILC-----REKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTS  232 (516)
T ss_pred             ccchhhHHHHh--------cCCccceEEEE-----eecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHH
Confidence            45788999999        99999999862     22222221111            1123446888999999999999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +..+|...+.+|+||||.+||.|+-.+.+.+.++|...+++.
T Consensus       233 LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYG  274 (516)
T KOG0690|consen  233 LKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYG  274 (516)
T ss_pred             hhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhh
Confidence            999999999999999999999999999998899999988764

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.27  E-value=3.1e-12  Score=89.85  Aligned_cols=91  Identities=21%  Similarity=0.238  Sum_probs=65.8

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCC-cccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPS-ERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~-~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      ||.|+||.||++....     +++.... .... .....+.+|+.+++.++||||+++++.+.+++.+|++||||++|+|
T Consensus        51 lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L  130 (370)
T cd05621          51 IGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDL  130 (370)
T ss_pred             EEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcH
Confidence            4999999999743310     1111100 0000 1112355789999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHhhhh
Q psy14717        105 DLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~~~l~~~~~~~~~  123 (125)
                      .++++.. .+++..++.++
T Consensus       131 ~~~l~~~-~~~~~~~~~~~  148 (370)
T cd05621         131 VNLMSNY-DVPEKWAKFYT  148 (370)
T ss_pred             HHHHHhc-CCCHHHHHHHH
Confidence            9999874 68887776554

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.27  E-value=3.8e-12  Score=85.71  Aligned_cols=99  Identities=27%  Similarity=0.479  Sum_probs=72.6

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|+.++.|        |.|.||.||++...     .+++.............+.+|+.++..+.|+|++++++.+..+
T Consensus         3 ~~~~~~~~~i--------g~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   74 (277)
T cd06641           3 EELFTKLEKI--------GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD   74 (277)
T ss_pred             HHhhhhheeE--------eecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC
Confidence            3567777777        99999999975331     1122111111111223566899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      +..|++|||+++|+|.+++.. ..++++.+..+
T Consensus        75 ~~~~lv~e~~~~~~l~~~i~~-~~~~~~~~~~~  106 (277)
T cd06641          75 TKLWIIMEYLGGGSALDLLEP-GPLDETQIATI  106 (277)
T ss_pred             CeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHH
Confidence            999999999999999999976 46777766544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.26  E-value=7.1e-12  Score=86.63  Aligned_cols=92  Identities=20%  Similarity=0.210  Sum_probs=68.3

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCcc--ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSER--ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      ||.|+||.||++...     .+++......  .......+.+|+.+++.+.||||+++++.+...+.+|+||||+++|+|
T Consensus         3 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L   82 (328)
T cd05593           3 LGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGEL   82 (328)
T ss_pred             eeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCH
Confidence            599999999975321     1111111110  011122456799999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHhhhh
Q psy14717        105 DLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..++...+.+++..++.++
T Consensus        83 ~~~l~~~~~l~~~~~~~~~  101 (328)
T cd05593          83 FFHLSRERVFSEDRTRFYG  101 (328)
T ss_pred             HHHHHhcCCCCHHHHHHHH
Confidence            9999887788888776654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.26  E-value=3.5e-12  Score=89.59  Aligned_cols=99  Identities=22%  Similarity=0.221  Sum_probs=69.8

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-cc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-AD-LKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      +.|++++.|        |.|+||.||++...     .+++...... .. .....+.+|+.++..++|+|++++++++.+
T Consensus        43 ~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~  114 (370)
T cd05596          43 EDFDVIKVI--------GRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQD  114 (370)
T ss_pred             HHcEEEEEE--------eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence            345555555        99999999974321     0111111000 00 111135578999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++.+|++||||++|+|.++++.. .+++..+..++
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~  148 (370)
T cd05596         115 DKYLYMVMEYMPGGDLVNLMSNY-DIPEKWARFYT  148 (370)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHH
Confidence            99999999999999999999874 68887776544

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.26  E-value=7.6e-12  Score=86.48  Aligned_cols=92  Identities=17%  Similarity=0.296  Sum_probs=67.1

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCcccc--HHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERAD--LKTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~~--~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      ||+|+||.||++....     +++........  .....+.+|..++..+ +||||+++++++.+.+.+|++||||++|+
T Consensus         3 lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~   82 (329)
T cd05588           3 IGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGD   82 (329)
T ss_pred             EeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCC
Confidence            5999999999753310     11111111000  1112355788888887 79999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCHHHHhhhh
Q psy14717        104 LDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~~~l~~~~~~~~~  123 (125)
                      |.+++...+.+++..++.++
T Consensus        83 L~~~~~~~~~l~~~~~~~~~  102 (329)
T cd05588          83 LMFHMQRQRKLPEEHARFYS  102 (329)
T ss_pred             HHHHHHHcCCCCHHHHHHHH
Confidence            99999887889998877654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.26  E-value=2.3e-12  Score=89.16  Aligned_cols=99  Identities=23%  Similarity=0.271  Sum_probs=70.1

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCC-ccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPS-ERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~-~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .|++++.|        |+|+||.||++....     +++.... ... ......+.+|+.++..++|+||+++++.+..+
T Consensus         2 ~y~~~~~l--------G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~   73 (331)
T cd05597           2 DFEILKVI--------GRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDE   73 (331)
T ss_pred             CceEEEEE--------EecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC
Confidence            35556666        999999999743210     1111100 000 01112355788888889999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +.+|++|||+++|+|.+++.+. ..+++..++.++
T Consensus        74 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~  108 (331)
T cd05597          74 NNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYL  108 (331)
T ss_pred             CeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999999873 568887776654

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.26  E-value=2.4e-12  Score=88.43  Aligned_cols=93  Identities=19%  Similarity=0.183  Sum_probs=67.7

Q ss_pred             CCCCCCchhHHHHHHH--------HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCC
Q psy14717         31 KLPAGIFTDSFRDFVD--------RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDG  101 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~  101 (125)
                      .||.|+||.||++...        .+++........ .......+|+.+++.++|+||+++++.+..++.+|++|||+++
T Consensus         3 ~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~   82 (318)
T cd05582           3 VLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRG   82 (318)
T ss_pred             eeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCC
Confidence            3599999999964321        011111100000 1122456799999999999999999999999999999999999


Q ss_pred             CCHHHHHHHcCCCCHHHHhhhh
Q psy14717        102 GSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      |+|.+++.+...+++..+..++
T Consensus        83 ~~L~~~l~~~~~l~~~~~~~~~  104 (318)
T cd05582          83 GDLFTRLSKEVMFTEEDVKFYL  104 (318)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHH
Confidence            9999999887778888776654

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.26  E-value=2.8e-12  Score=86.61  Aligned_cols=99  Identities=33%  Similarity=0.515  Sum_probs=73.8

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD   91 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~   91 (125)
                      .|++++.|        |.|+||.||++...     .+++.............+.+|+.+++.+.|+|++++++.+..++.
T Consensus         2 ~~~~~~~i--------g~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   73 (286)
T cd06622           2 EIEVLDEL--------GKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGA   73 (286)
T ss_pred             hhhhhhhh--------cccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCe
Confidence            57888888        99999999985432     111111111111122356689999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHc---CCCCHHHHhhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKA---GKIPEHILGTIT  123 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~---~~l~~~~~~~~~  123 (125)
                      .+++|||+++++|..++...   ..+++..+..++
T Consensus        74 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  108 (286)
T cd06622          74 VYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRIT  108 (286)
T ss_pred             EEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHH
Confidence            99999999999999998873   368887766554

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.26  E-value=3e-12  Score=85.72  Aligned_cols=99  Identities=19%  Similarity=0.297  Sum_probs=71.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      ..|++.+.+        |+|.||.||++...        .+++.............+.+|+.++..++|||++++++++.
T Consensus         4 ~~~~~~~~l--------g~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   75 (267)
T cd05066           4 SCIKIEKVI--------GAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT   75 (267)
T ss_pred             HHeEeeeee--------cccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence            355666666        99999999975321        11121111111122235678999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTI  122 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~  122 (125)
                      .++.+|++|||+++|+|.+++... ..+++..+..+
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i  111 (267)
T cd05066          76 KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGM  111 (267)
T ss_pred             cCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHH
Confidence            999999999999999999999875 45676655443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.26  E-value=7.7e-12  Score=86.25  Aligned_cols=92  Identities=18%  Similarity=0.188  Sum_probs=67.6

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCccc-c-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSERA-D-LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      ||+|+||.||++...     .+++....... . .......+|+.++..+.|+||+.+++.+...+.+|+||||+++|+|
T Consensus         3 lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L   82 (325)
T cd05594           3 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL   82 (325)
T ss_pred             eeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcH
Confidence            599999999974321     01111111100 0 1112445788899999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHhhhh
Q psy14717        105 DLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..++.+.+.+++..++.++
T Consensus        83 ~~~l~~~~~l~~~~~~~~~  101 (325)
T cd05594          83 FFHLSRERVFSEDRARFYG  101 (325)
T ss_pred             HHHHHhcCCCCHHHHHHHH
Confidence            9999887788988776654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.25  E-value=5e-12  Score=85.33  Aligned_cols=89  Identities=13%  Similarity=0.227  Sum_probs=65.7

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      .+.+++.+.+        |+|+||.||++...         .+++.............+.+|+.+++.++|+|++++++.
T Consensus         4 ~~~~~~~~~l--------g~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~   75 (283)
T cd05090           4 LSAVRFMEEL--------GECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGV   75 (283)
T ss_pred             hhhceeeeec--------cccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEE
Confidence            4567777777        99999999986420         111111111111222356689999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      +......|++|||+++|+|.+++...
T Consensus        76 ~~~~~~~~lv~e~~~~~~L~~~l~~~  101 (283)
T cd05090          76 VTQEQPVCMLFEYLNQGDLHEFLIMR  101 (283)
T ss_pred             EecCCceEEEEEcCCCCcHHHHHHhc
Confidence            99999999999999999999999643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.25  E-value=1e-12  Score=87.96  Aligned_cols=92  Identities=24%  Similarity=0.344  Sum_probs=65.3

Q ss_pred             CCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         32 LPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        32 lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      ||.|+||.||++.+.         .+++.............+.+|+..++.++||||+++++.+...+..++++|||++|
T Consensus         7 ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g   86 (259)
T PF07714_consen    7 IGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGG   86 (259)
T ss_dssp             EEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTE
T ss_pred             EccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccccccc
Confidence            399999999986443         01111111111112346778999999999999999999999878899999999999


Q ss_pred             CHHHHHHHc--CCCCHHHHhhhh
Q psy14717        103 SLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      +|.++|...  ..+++..+..++
T Consensus        87 ~L~~~L~~~~~~~~~~~~~~~i~  109 (259)
T PF07714_consen   87 SLDDYLKSKNKEPLSEQQRLSIA  109 (259)
T ss_dssp             BHHHHHHHTCTTTSBHHHHHHHH
T ss_pred             ccccccccccccccccccccccc
Confidence            999999986  567777666554

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.25  E-value=1.6e-11  Score=82.56  Aligned_cols=89  Identities=19%  Similarity=0.260  Sum_probs=68.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH----------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR----------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      ...|.+++.+        |.|+||.||++....          +++.............+.+|+.++..+.|+|++++++
T Consensus         4 ~~~~~~~~~l--------g~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~   75 (280)
T cd05049           4 RDTIVLKREL--------GEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYG   75 (280)
T ss_pred             hHHhhHHhhc--------cccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheee
Confidence            4578888888        999999999875421          1111111111112235678999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      .+......+++|||+++|+|.++++..
T Consensus        76 ~~~~~~~~~lv~e~~~~~~L~~~i~~~  102 (280)
T cd05049          76 VCTEGDPPIMVFEYMEHGDLNKFLRSH  102 (280)
T ss_pred             EEecCCCeEEEEecCCCCCHHHHHHhc
Confidence            999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.25  E-value=9.3e-12  Score=84.39  Aligned_cols=101  Identities=19%  Similarity=0.242  Sum_probs=73.9

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH---------------------HhhcCCCccccHHhhhHHHHHHHHHh
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR---------------------CLKKNPSERADLKTLSATTILKVLHE   73 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~e~~~~~~   73 (125)
                      ...|++++.+        |.|+||.||++....                     +.+.............+.+|+.++..
T Consensus         4 ~~~~~~~~~l--------g~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~   75 (296)
T cd05051           4 RQPLNFVEKL--------GEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSR   75 (296)
T ss_pred             hhhCcccccc--------cCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHh
Confidence            4578888888        999999999754321                     11111111111112246689999999


Q ss_pred             cCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcC-----------CCCHHHHhhhh
Q psy14717         74 CNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAG-----------KIPEHILGTIT  123 (125)
Q Consensus        74 ~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~-----------~l~~~~~~~~~  123 (125)
                      ++|+|++++++.+..+...+++||++++++|.+++.+..           .+++..+..++
T Consensus        76 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (296)
T cd05051          76 LSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMA  136 (296)
T ss_pred             cCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHH
Confidence            999999999999999899999999999999999998765           56776665543

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.25  E-value=4.1e-12  Score=87.87  Aligned_cols=99  Identities=21%  Similarity=0.242  Sum_probs=69.9

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCcc--ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSER--ADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .|++++.|        |+|+||.||++....     +++......  .......+.+|..++..+.|++|+.+++.+...
T Consensus         2 ~y~i~~~l--------G~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~   73 (331)
T cd05624           2 DFEIIKVI--------GRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDE   73 (331)
T ss_pred             CceEEEEE--------eeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC
Confidence            35555666        999999999753210     111110000  001112355688888889999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +.+|++|||+++|+|.+++++. ..+++..++.++
T Consensus        74 ~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~  108 (331)
T cd05624          74 NYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYI  108 (331)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999999874 578887766543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0196|consensus

Probab=99.24  E-value=3.2e-12  Score=94.97  Aligned_cols=85  Identities=19%  Similarity=0.303  Sum_probs=65.2

Q ss_pred             CCCCCchhHHHHHHHHHhhc------CCCc-cc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRDFVDRCLKK------NPSE-RA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~~~~~------~~~~-~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      +|.|.||+|+.+....-.++      +..+ .. ...+..++.|..||.+..||||+++-|++.....+.|++|||.+|+
T Consensus       637 IGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGs  716 (996)
T KOG0196|consen  637 IGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGS  716 (996)
T ss_pred             EecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCc
Confidence            69999999998854311110      0001 11 1223468899999999999999999999999999999999999999


Q ss_pred             HHHHHHHc-CCCCH
Q psy14717        104 LDLILKKA-GKIPE  116 (125)
Q Consensus       104 L~~~l~~~-~~l~~  116 (125)
                      |..+|+++ +.|+.
T Consensus       717 LDsFLR~~DGqftv  730 (996)
T KOG0196|consen  717 LDSFLRQNDGQFTV  730 (996)
T ss_pred             HHHHHhhcCCceEe
Confidence            99999987 44554

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.24  E-value=9.7e-12  Score=83.80  Aligned_cols=89  Identities=15%  Similarity=0.276  Sum_probs=67.1

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH----------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR----------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .+.|++++.|        |.|+||.||.+....          +++.............+.+|+.++..++|+|++++++
T Consensus         4 ~~~~~~~~~l--------g~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~   75 (283)
T cd05048           4 LSAVRFLEEL--------GEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLG   75 (283)
T ss_pred             hHHcchhhcc--------cCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEE
Confidence            4578888888        999999999754211          1111111111112234678999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++......|++|||+++|+|.+++...
T Consensus        76 ~~~~~~~~~~~~e~~~~~~L~~~l~~~  102 (283)
T cd05048          76 VCTKEQPTCMLFEYLAHGDLHEFLVRN  102 (283)
T ss_pred             EEcCCCceEEEEecCCCCcHHHHHHhc
Confidence            999988999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.24  E-value=4.8e-12  Score=85.17  Aligned_cols=99  Identities=28%  Similarity=0.495  Sum_probs=74.3

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|+.++.|        |.|.||.||++....     +++.............+.+|+.+++.+.|+|++++++.+..+
T Consensus         3 ~~~y~~~~~l--------~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   74 (277)
T cd06642           3 EELFTKLERI--------GKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKG   74 (277)
T ss_pred             HHHHHHHHHh--------cCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccC
Confidence            4578888999        999999999864321     122111111112223567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      +..+++|||+++|+|.+++.. +.+++..+..+
T Consensus        75 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~  106 (277)
T cd06642          75 TKLWIIMEYLGGGSALDLLKP-GPLEETYIATI  106 (277)
T ss_pred             CceEEEEEccCCCcHHHHhhc-CCCCHHHHHHH
Confidence            999999999999999999876 46777766544

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.24  E-value=1.1e-11  Score=82.18  Aligned_cols=92  Identities=20%  Similarity=0.282  Sum_probs=67.3

Q ss_pred             CCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         31 KLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      .+|.|+||.||++...     .+++.............+.+|+.+++.+.|+|++++++++.....++++|||+++|+|.
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   81 (252)
T cd05084           2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL   81 (252)
T ss_pred             ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence            3599999999975432     11222111111122235678999999999999999999999999999999999999999


Q ss_pred             HHHHHcC-CCCHHHHhhh
Q psy14717        106 LILKKAG-KIPEHILGTI  122 (125)
Q Consensus       106 ~~l~~~~-~l~~~~~~~~  122 (125)
                      +++...+ .+++..+..+
T Consensus        82 ~~~~~~~~~~~~~~~~~~   99 (252)
T cd05084          82 TFLRTEGPRLKVKELIQM   99 (252)
T ss_pred             HHHHhCCCCCCHHHHHHH
Confidence            9997653 5777665544

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.23  E-value=1.4e-11  Score=83.72  Aligned_cols=89  Identities=13%  Similarity=0.219  Sum_probs=66.4

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH---------------------HhhcCCCccccHHhhhHHHHHHHHHh
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR---------------------CLKKNPSERADLKTLSATTILKVLHE   73 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~e~~~~~~   73 (125)
                      ...|++.+.+        |+|+||.||.+....                     +++.............+.+|+.+++.
T Consensus         4 ~~~~~~~~~l--------g~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~   75 (296)
T cd05095           4 RKRLTFKEKL--------GEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSR   75 (296)
T ss_pred             hhhceeeeec--------cCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHh
Confidence            4467888888        999999999754210                     11111111111112356789999999


Q ss_pred             cCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         74 CNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        74 ~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++|+|++++++++...+..+++|||+++|+|.+++...
T Consensus        76 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  113 (296)
T cd05095          76 LKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRH  113 (296)
T ss_pred             CCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhc
Confidence            99999999999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.23  E-value=3.6e-12  Score=87.83  Aligned_cols=92  Identities=20%  Similarity=0.229  Sum_probs=66.5

Q ss_pred             CCCCCCchhHHHHHHH--------HHhhcCCCcc---ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEec
Q psy14717         31 KLPAGIFTDSFRDFVD--------RCLKKNPSER---ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYM   99 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~--------~~~~~~~~~~---~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~   99 (125)
                      .||+|+||.||++...        .+++......   .......+.+|+.+++.++||||+++++.+..++.+|++|||+
T Consensus         3 ~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~   82 (323)
T cd05584           3 VLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYL   82 (323)
T ss_pred             eeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCC
Confidence            3599999999974321        0111100000   0011123457999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHcCCCCHHHHhhh
Q psy14717        100 DGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus       100 ~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      ++|+|.+++++.+.+++..+..+
T Consensus        83 ~~~~L~~~~~~~~~~~~~~~~~~  105 (323)
T cd05584          83 SGGELFMHLEREGIFMEDTACFY  105 (323)
T ss_pred             CCchHHHHHHHcCCCCHHHHHHH
Confidence            99999999998777887766544

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.23  E-value=2.2e-12  Score=89.52  Aligned_cols=98  Identities=21%  Similarity=0.316  Sum_probs=72.0

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-c-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-D-LKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      |++++.|        |.|+||.||++...     .+++....... . .....+.+|+.++..++|+|++++++.+.+++
T Consensus         3 y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~   74 (350)
T cd05573           3 FEVIKVI--------GRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEE   74 (350)
T ss_pred             ceEEEEE--------EeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCC
Confidence            4555666        99999999985432     11111111000 0 11124567899999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+|++|||+++|+|.+++...+.+++..++.++
T Consensus        75 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~  107 (350)
T cd05573          75 HLYLVMEYMPGGDLMNLLIRKDVFPEETARFYI  107 (350)
T ss_pred             eEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence            999999999999999999987788888776654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.23  E-value=4.6e-12  Score=84.29  Aligned_cols=98  Identities=17%  Similarity=0.276  Sum_probs=71.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD   91 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~   91 (125)
                      +.|++++.+        |+|+||.||++...    .+++....  .......+.+|+.+++.++|||++++++++.....
T Consensus         4 ~~~~~~~~l--------g~G~~~~vy~~~~~~~~~~a~K~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   73 (256)
T cd05114           4 SELTFMKEL--------GSGQFGVVHLGKWRAQIKVAIKAINE--GAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKP   73 (256)
T ss_pred             HHcEEeeEe--------cCCcCceEEEEEeccCceEEEEeccc--CCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCC
Confidence            356666777        99999999975331    11111111  11112356679999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ++++|||+++|+|.+++... +.+++..+..++
T Consensus        74 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  106 (256)
T cd05114          74 LYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMC  106 (256)
T ss_pred             EEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHH
Confidence            99999999999999999764 457776655543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.23  E-value=1e-11  Score=83.24  Aligned_cols=80  Identities=13%  Similarity=0.130  Sum_probs=60.0

Q ss_pred             CCCCCchhHHHHHHH-------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVD-------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      ||+|+||.||++.+.       .+.+.............+.+|+.+++.++|+|++++++.+.....++++|||+++|+|
T Consensus         3 lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   82 (269)
T cd05087           3 IGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDL   82 (269)
T ss_pred             ccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcH
Confidence            599999999986321       1112111111112233567899999999999999999999988889999999999999


Q ss_pred             HHHHHHc
Q psy14717        105 DLILKKA  111 (125)
Q Consensus       105 ~~~l~~~  111 (125)
                      .++++..
T Consensus        83 ~~~l~~~   89 (269)
T cd05087          83 KGYLRSC   89 (269)
T ss_pred             HHHHHHh
Confidence            9999764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.22  E-value=3.7e-12  Score=87.88  Aligned_cols=98  Identities=17%  Similarity=0.168  Sum_probs=70.8

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      |++.+.|        |.|+||.||++....     +++.......  ......+.+|+.++..++|+|++++++.+...+
T Consensus         3 y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~   74 (330)
T cd05601           3 FDVKSLV--------GRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD   74 (330)
T ss_pred             ceEEEEE--------EeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC
Confidence            4455566        999999999753210     1111111000  011124567888999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .+|++|||+++|+|.+++++. ..+++..++.++
T Consensus        75 ~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~  108 (330)
T cd05601          75 NLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYL  108 (330)
T ss_pred             eEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHH
Confidence            999999999999999999886 678888876654

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.22  E-value=6.4e-12  Score=88.30  Aligned_cols=99  Identities=20%  Similarity=0.222  Sum_probs=70.3

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      +.|++++.|        |.|+||.||++....     +++.......  ......+.+|+.++..++||||+++++.+..
T Consensus        43 ~~y~i~~~l--------G~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          43 EDYEVVKVI--------GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             hhcEEEEEE--------eecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            456666666        999999999743210     1111110000  0111235578889999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ...+|++||||++|+|.++++.. .+++..++.++
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~  148 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYT  148 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHH
Confidence            99999999999999999999874 68887766543

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.22  E-value=7e-12  Score=85.62  Aligned_cols=88  Identities=19%  Similarity=0.269  Sum_probs=64.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-------HhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeeeeEE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-------CLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYGAFI   87 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~   87 (125)
                      +.|++.+.+        |.|+||.||++.+..       +++.............+.+|+.++..+ +|+|++++++++.
T Consensus         7 ~~~~~~~~l--------g~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~   78 (303)
T cd05088           7 NDIKFQDVI--------GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE   78 (303)
T ss_pred             hhceeeeee--------cCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC
Confidence            466677777        999999999864321       111111111111222466799999998 8999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ..+..|++|||+++|+|.++++..
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~  102 (303)
T cd05088          79 HRGYLYLAIEYAPHGNLLDFLRKS  102 (303)
T ss_pred             CCCCceEEEEeCCCCcHHHHHHhc
Confidence            999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG4721|consensus

Probab=99.21  E-value=3.9e-11  Score=87.13  Aligned_cols=96  Identities=22%  Similarity=0.290  Sum_probs=72.6

Q ss_pred             CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHhh--hHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         12 PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL--SATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~~--~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ..+++.+..++-+        |+|+-|.||.+...       .+.+++++.  ....+|+=++.++|+||+.|.|+|...
T Consensus       120 eiPFe~IsELeWl--------GSGaQGAVF~Grl~-------netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqs  184 (904)
T KOG4721|consen  120 EIPFEEISELEWL--------GSGAQGAVFLGRLH-------NETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQS  184 (904)
T ss_pred             cCCHHHhhhhhhh--------ccCcccceeeeecc-------CceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCC
Confidence            3445555666666        99999999987532       111222222  233577778899999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      ...|||||||..|-|+..|+..+.+....+..|
T Consensus       185 PcyCIiMEfCa~GqL~~VLka~~~itp~llv~W  217 (904)
T KOG4721|consen  185 PCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDW  217 (904)
T ss_pred             ceeEEeeeccccccHHHHHhccCccCHHHHHHH
Confidence            999999999999999999998877777666554

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.21  E-value=1.8e-11  Score=83.05  Aligned_cols=101  Identities=22%  Similarity=0.391  Sum_probs=74.4

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      +.+.|++++++        |.|+||.||++....     +++..... .......+.+|+.+++.++|+|++++++.+..
T Consensus        10 ~~~~y~i~~~l--------g~g~~g~vy~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   80 (292)
T cd06644          10 PNEVWEIIGEL--------GDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYMVEIEILATCNHPYIVKLLGAFYW   80 (292)
T ss_pred             cchhhhhhhee--------cCCCCeEEEEEEECCCCceEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe
Confidence            34689999999        999999999754321     11111111 11122346679999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ++..|++|||+++|+|..++.+. ..+++..+..++
T Consensus        81 ~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~  116 (292)
T cd06644          81 DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVIC  116 (292)
T ss_pred             CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHH
Confidence            99999999999999999988653 567777665543

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.21  E-value=1.2e-11  Score=82.78  Aligned_cols=81  Identities=16%  Similarity=0.205  Sum_probs=59.8

Q ss_pred             CCCCCCchhHHHHHHHH-------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         31 KLPAGIFTDSFRDFVDR-------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      .||+|+||.||++....       +++.............+.+|+.+++.++|+||+++++.+......+++|||+++|+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~   81 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD   81 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence            35999999999763210       11111111111122346689999999999999999999999999999999999999


Q ss_pred             HHHHHHHc
Q psy14717        104 LDLILKKA  111 (125)
Q Consensus       104 L~~~l~~~  111 (125)
                      |.++++..
T Consensus        82 L~~~l~~~   89 (269)
T cd05042          82 LKNYLRSN   89 (269)
T ss_pred             HHHHHHhc
Confidence            99999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.21  E-value=8.2e-12  Score=86.39  Aligned_cols=98  Identities=22%  Similarity=0.267  Sum_probs=69.4

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCcc-cc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSER-AD-LKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~-~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      |++++.|        |+|+||.||++....     +++...... .. .....+.+|+.++..++|++++.+++.+.+.+
T Consensus         3 y~~~~~l--------G~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~   74 (332)
T cd05623           3 FEILKVI--------GRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN   74 (332)
T ss_pred             ceEEEEE--------EeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC
Confidence            4555666        999999999753311     111110000 00 01113557888888899999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .+|++|||+++|+|.+++++. ..+++..++.++
T Consensus        75 ~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~  108 (332)
T cd05623          75 NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYL  108 (332)
T ss_pred             EEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHH
Confidence            999999999999999999874 578887766554

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PHA02988 hypothetical protein; Provisional

Probab=99.20  E-value=8.1e-12  Score=84.69  Aligned_cols=92  Identities=15%  Similarity=0.183  Sum_probs=65.3

Q ss_pred             CCCCCCchhHHHHHHH---HHhhcCCCccccHH--hhhHHHHHHHHHhcCCCceeeeeeeEEe----CCeEEEEEEecCC
Q psy14717         31 KLPAGIFTDSFRDFVD---RCLKKNPSERADLK--TLSATTILKVLHECNFAHIVGFYGAFIS----DQDISICMEYMDG  101 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~---~~~~~~~~~~~~~~--~~~~~~e~~~~~~~~h~~iv~~~~~~~~----~~~~~iv~e~~~~  101 (125)
                      .++.|+++.||++...   .+++.........+  ...+.+|+.+++.++||||+++++++.+    ...++++|||+++
T Consensus        27 ~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~  106 (283)
T PHA02988         27 LIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTR  106 (283)
T ss_pred             EEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCC
Confidence            3488999999986542   12222111111111  1245689999999999999999999877    3468999999999


Q ss_pred             CCHHHHHHHcCCCCHHHHhhh
Q psy14717        102 GSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      |+|.++++..+.+++.....+
T Consensus       107 g~L~~~l~~~~~~~~~~~~~i  127 (283)
T PHA02988        107 GYLREVLDKEKDLSFKTKLDM  127 (283)
T ss_pred             CcHHHHHhhCCCCChhHHHHH
Confidence            999999998777776555443

>KOG0033|consensus

Probab=99.20  E-value=6.3e-11  Score=78.31  Aligned_cols=102  Identities=10%  Similarity=0.032  Sum_probs=75.0

Q ss_pred             CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCC-CccccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         12 PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNP-SERADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~-~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      ....+.|++-++|        |.|.|+.|+++.+.     .+.+... .+..+.....+.+|+.+-+.++||||+.+++.
T Consensus         7 ~~f~d~y~l~e~i--------gkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~t   78 (355)
T KOG0033|consen    7 TKFSDNYDVKEEL--------GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS   78 (355)
T ss_pred             cccchhhhHHHHH--------ccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhh
Confidence            3456789999999        99999999996542     1222111 11111223356789999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKAGKIPEHILGT  121 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~  121 (125)
                      +......|+|.|+|.||+|..=|-.+..++|..+..
T Consensus        79 i~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH  114 (355)
T KOG0033|consen   79 IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH  114 (355)
T ss_pred             hcccceeEEEEecccchHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999977665545667655443

>KOG2052|consensus

Probab=99.20  E-value=2.6e-12  Score=90.22  Aligned_cols=111  Identities=20%  Similarity=0.217  Sum_probs=75.1

Q ss_pred             CCCCCCCCCCCCchH-----HHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccc-cHHhhhHHHHHHHHHh--c
Q psy14717          3 SISGSGSNVPRPMAI-----FELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERA-DLKTLSATTILKVLHE--C   74 (125)
Q Consensus         3 ~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~--~   74 (125)
                      .+||+|+-.|..-.+     ..+.+.|        |+|.||+||++.+.-.  .+..+.. +.++....+|.++...  +
T Consensus       193 ~tSGSGSGlplLVQRTiarqI~L~e~I--------GkGRyGEVwrG~wrGe--~VAVKiF~srdE~SWfrEtEIYqTvmL  262 (513)
T KOG2052|consen  193 ETSGSGSGLPLLVQRTIARQIVLQEII--------GKGRFGEVWRGRWRGE--DVAVKIFSSRDERSWFRETEIYQTVML  262 (513)
T ss_pred             ccCCCCCCchhHhHHhhhheeEEEEEe--------cCccccceeeccccCC--ceEEEEecccchhhhhhHHHHHHHHHh
Confidence            468888877743221     1233444        9999999999987521  1111211 1233356678887775  7


Q ss_pred             CCCceeeeeeeEEeCC----eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhhc
Q psy14717         75 NFAHIVGFYGAFISDQ----DISICMEYMDGGSLDLILKKAGKIPEHILGTITS  124 (125)
Q Consensus        75 ~h~~iv~~~~~~~~~~----~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~~  124 (125)
                      +|+||+.+.+.-..++    ++|+|++|=+.|||+|||++. -++.....++++
T Consensus       263 RHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~-tv~~~~ml~Lal  315 (513)
T KOG2052|consen  263 RHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN-TVTTEGMLKLAL  315 (513)
T ss_pred             ccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc-cCCHHHHHHHHH
Confidence            9999999998776543    499999999999999999994 566555544443

>KOG0607|consensus

Probab=99.20  E-value=1.7e-11  Score=83.61  Aligned_cols=90  Identities=16%  Similarity=0.216  Sum_probs=70.1

Q ss_pred             CCCCCchhHHHHHH-----HHHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         32 LPAGIFTDSFRDFV-----DRCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        32 lg~g~fg~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      ||+|.|+.|-.+..     ..+++....+ ..-.+.++.+|++++..+ .|+||++++++|.++...|+|+|-|.||+|.
T Consensus        86 LGeGAyasVqtcv~i~t~~EYAVKiidKq-~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplL  164 (463)
T KOG0607|consen   86 LGEGAYASVQTCVSIQTGKEYAVKIIDKQ-PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLL  164 (463)
T ss_pred             hcCccceeeeeeeeeccchhhhhhhhhcC-CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHH
Confidence            48899988776432     1233322222 333444788999999998 6999999999999999999999999999999


Q ss_pred             HHHHHcCCCCHHHHhhh
Q psy14717        106 LILKKAGKIPEHILGTI  122 (125)
Q Consensus       106 ~~l~~~~~l~~~~~~~~  122 (125)
                      ..|.++.+|+|..+..+
T Consensus       165 shI~~~~~F~E~EAs~v  181 (463)
T KOG0607|consen  165 SHIQKRKHFNEREASRV  181 (463)
T ss_pred             HHHHHhhhccHHHHHHH
Confidence            99999999998766544

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=6.9e-12  Score=83.43  Aligned_cols=100  Identities=24%  Similarity=0.419  Sum_probs=74.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|+..+.+        |.|+||.||++....     +++....... .....+.+|+.+++.++|+|++++++.+...
T Consensus         2 ~~~~~~~~~l--------~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~   72 (262)
T cd06613           2 QEDYELIQRI--------GSGTYGDVYKARDIATGELVAIKVIKLEPG-DDFEIIQQEISMLKECRHPNIVAYFGSYLRR   72 (262)
T ss_pred             ccceEEEEEe--------cCCCceEEEEeEecCCCCEEEEEEEEcCch-hhHHHHHHHHHHHHhCCCCChhceEEEEEeC
Confidence            3466666777        999999999864321     1111111111 1223567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +.+|++|||+++++|.++++.. ..+++..+..++
T Consensus        73 ~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~  107 (262)
T cd06613          73 DKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVC  107 (262)
T ss_pred             CEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHH
Confidence            9999999999999999999876 678887766543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.19  E-value=5.6e-12  Score=85.37  Aligned_cols=91  Identities=18%  Similarity=0.174  Sum_probs=65.5

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCcccc--HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERAD--LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~~--~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      |+|+||.||++...     .+++........  .....+.+|+.+++.++|+|++++++.+..++.++++|||+.+|+|.
T Consensus         9 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~   88 (285)
T cd05605           9 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLK   88 (285)
T ss_pred             ecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHH
Confidence            99999999975432     111111111011  11123457999999999999999999999999999999999999999


Q ss_pred             HHHHHc--CCCCHHHHhhhh
Q psy14717        106 LILKKA--GKIPEHILGTIT  123 (125)
Q Consensus       106 ~~l~~~--~~l~~~~~~~~~  123 (125)
                      +++.+.  ..++++.+..++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~  108 (285)
T cd05605          89 FHIYNMGNPGFDEERAVFYA  108 (285)
T ss_pred             HHHHhcCcCCCCHHHHHHHH
Confidence            988764  357887766543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.19  E-value=2.6e-11  Score=81.46  Aligned_cols=98  Identities=29%  Similarity=0.478  Sum_probs=73.0

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD   91 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~   91 (125)
                      .|+.++.+        |.|+||.||++....     +++.............+.+|+.+++.++|+|++++++.+.....
T Consensus         2 ~y~~~~~l--------g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   73 (274)
T cd06609           2 LFTLLECI--------GKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSK   73 (274)
T ss_pred             hhhhhhhh--------cCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCe
Confidence            57778888        999999999854321     11111111111122246689999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|+++||+++|+|.++++.. .+++..+..++
T Consensus        74 ~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~  104 (274)
T cd06609          74 LWIIMEYCGGGSCLDLLKPG-KLDETYIAFIL  104 (274)
T ss_pred             EEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHH
Confidence            99999999999999999875 77877766543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.19  E-value=4.4e-11  Score=82.49  Aligned_cols=91  Identities=16%  Similarity=0.147  Sum_probs=65.2

Q ss_pred             CCC--CchhHHHHHHH-----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         33 PAG--IFTDSFRDFVD-----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        33 g~g--~fg~v~~~~~~-----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      |+|  +|+.||++...     .+++........ .....+.+|+.+++.++||||+++++++..++..|++|||+++|+|
T Consensus         7 g~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l   86 (327)
T cd08227           7 GRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSA   86 (327)
T ss_pred             cccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcH
Confidence            888  67888875432     122221111111 1122355789999999999999999999999999999999999999


Q ss_pred             HHHHHHc--CCCCHHHHhhhh
Q psy14717        105 DLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~--~~l~~~~~~~~~  123 (125)
                      .+++..+  ..+++..+..++
T Consensus        87 ~~~~~~~~~~~l~~~~~~~i~  107 (327)
T cd08227          87 KDLICTHFMDGMSELAIAYIL  107 (327)
T ss_pred             HHHHHhhccCCCCHHHHHHHH
Confidence            9999764  457877766554

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.19  E-value=5.8e-12  Score=96.89  Aligned_cols=103  Identities=26%  Similarity=0.405  Sum_probs=74.9

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      ...+.|+++..|        |.|+||.||++...     .+++...... .......+.+|+.++..+.||||+++++.|
T Consensus        10 ~~l~~YeIl~kL--------G~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f   81 (1021)
T PTZ00266         10 SRLNEYEVIKKI--------GNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRF   81 (1021)
T ss_pred             cccCCEEEEEEE--------ecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEE
Confidence            345688888899        99999999975432     1111111111 111223567899999999999999999988


Q ss_pred             Ee--CCeEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhhh
Q psy14717         87 IS--DQDISICMEYMDGGSLDLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus        87 ~~--~~~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~~  123 (125)
                      ..  ...+||+|||+++|+|.++|...    +.+++..++.++
T Consensus        82 ~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia  124 (1021)
T PTZ00266         82 LNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDIT  124 (1021)
T ss_pred             EecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHH
Confidence            65  35699999999999999999763    468888776654

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.19  E-value=2.9e-11  Score=83.60  Aligned_cols=92  Identities=20%  Similarity=0.332  Sum_probs=66.1

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccc-c-HHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERA-D-LKTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~-~-~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      ||+|+||.||++....     +++....... . .....+.+|+.++..+ +||||+++++++...+.++++|||+++|+
T Consensus         3 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~   82 (329)
T cd05618           3 IGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGD   82 (329)
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCC
Confidence            5999999999754321     1111111100 1 1112345678777765 89999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCHHHHhhhh
Q psy14717        104 LDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~~~l~~~~~~~~~  123 (125)
                      |..++...+.+++..++.++
T Consensus        83 L~~~~~~~~~l~~~~~~~i~  102 (329)
T cd05618          83 LMFHMQRQRKLPEEHARFYS  102 (329)
T ss_pred             HHHHHHHcCCCCHHHHHHHH
Confidence            99999887789988776654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.18  E-value=2.5e-11  Score=83.00  Aligned_cols=90  Identities=17%  Similarity=0.215  Sum_probs=66.3

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH------------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCcee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD------------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIV   80 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv   80 (125)
                      +.+.|.+.+.|        |+|+||.||.+...            .+++.............+.+|+.++..+ +|+|++
T Consensus        16 ~~~~~~i~~~l--------g~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~   87 (307)
T cd05098          16 PRDRLVLGKPL--------GEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNII   87 (307)
T ss_pred             ehHHeEEeeee--------ccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEe
Confidence            34677777888        99999999975421            1111111111111223466799999988 799999


Q ss_pred             eeeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         81 GFYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        81 ~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++++.+...+..|++|||+++|+|.+++...
T Consensus        88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~  118 (307)
T cd05098          88 NLLGACTQDGPLYVIVEYASKGNLREYLRAR  118 (307)
T ss_pred             eEEEEEecCCceEEEEecCCCCcHHHHHHhc
Confidence            9999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.18  E-value=3.8e-11  Score=81.12  Aligned_cols=92  Identities=23%  Similarity=0.215  Sum_probs=64.5

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCccccH--HhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSERADL--KTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~--~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      ||.|+||.||++...     .+++.........  ....+..|+.+++.++|+|++.+.+.+...+.++++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            489999999975332     1111111111101  112345799999999999999999999999999999999999999


Q ss_pred             HHHHHHc----CCCCHHHHhhhh
Q psy14717        105 DLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~----~~l~~~~~~~~~  123 (125)
                      ..++...    ..+++..+..++
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~  103 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYT  103 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHH
Confidence            9887542    457887766543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.18  E-value=1.2e-11  Score=84.52  Aligned_cols=101  Identities=18%  Similarity=0.145  Sum_probs=71.8

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFY   83 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~   83 (125)
                      .++|+..+.+        |.|+||.||++...          .+++.............+.+|+.+++.+ +|+||++++
T Consensus        34 ~~~~~~~~~i--------g~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~  105 (302)
T cd05055          34 RNNLSFGKTL--------GAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLL  105 (302)
T ss_pred             HHHeEEccee--------eccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEE
Confidence            3466677777        99999999875321          1111111111111223467899999999 799999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHcC--CCCHHHHhhhh
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~~  123 (125)
                      +.+...+.+|++|||+++|+|.+++++..  .+++..+..++
T Consensus       106 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~  147 (302)
T cd05055         106 GACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFS  147 (302)
T ss_pred             EEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHH
Confidence            99999999999999999999999998643  37777665543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.18  E-value=1.6e-11  Score=85.56  Aligned_cols=84  Identities=21%  Similarity=0.320  Sum_probs=62.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|+.++.|        |.|+||.||++...     .+++.............+.+|+.+++.++|+||+++++++...
T Consensus        73 ~~~~~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  144 (353)
T PLN00034         73 LSELERVNRI--------GSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHN  144 (353)
T ss_pred             HHHHhhhhhc--------cCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccC
Confidence            4677888888        99999999986432     1111111111111223567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHH
Q psy14717         90 QDISICMEYMDGGSLDL  106 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~  106 (125)
                      +.++++|||+.+|+|..
T Consensus       145 ~~~~lv~e~~~~~~L~~  161 (353)
T PLN00034        145 GEIQVLLEFMDGGSLEG  161 (353)
T ss_pred             CeEEEEEecCCCCcccc
Confidence            99999999999999865

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.18  E-value=1.2e-11  Score=89.49  Aligned_cols=97  Identities=23%  Similarity=0.297  Sum_probs=69.1

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      .|.+.+.+        |+|+||.||.+....      +.+..... .......+.+|+.++..++||||+++++.+...+
T Consensus        68 ~y~~~~~l--------g~G~~g~vy~a~~~~~~~~~vv~K~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~  138 (478)
T PTZ00267         68 MYVLTTLV--------GRNPTTAAFVATRGSDPKEKVVAKFVMLN-DERQAAYARSELHCLAACDHFGIVKHFDDFKSDD  138 (478)
T ss_pred             eEEEEEEE--------EeCCCcEEEEEEEcCCCCeEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC
Confidence            36666677        999999999753210      11111110 1111224567999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKA----GKIPEHILGTI  122 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~  122 (125)
                      .+||+|||+++|+|.+++++.    ..+++..+..+
T Consensus       139 ~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i  174 (478)
T PTZ00267        139 KLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLL  174 (478)
T ss_pred             EEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHH
Confidence            999999999999999988653    35777665544

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.18  E-value=1.3e-11  Score=83.73  Aligned_cols=99  Identities=23%  Similarity=0.388  Sum_probs=72.1

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccc-c-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERA-D-LKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~-~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .|++++.|        |.|+||.||++....     +++....... . .....+.+|+.+++.++|+|++++++.+...
T Consensus         2 ~y~~~~~i--------g~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   73 (290)
T cd05580           2 DFEFIKTL--------GTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD   73 (290)
T ss_pred             ceEEEEEe--------ecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC
Confidence            34555666        999999999754321     1111111000 0 1122466899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.++++|||+++|+|.+++...+.+++..+..++
T Consensus        74 ~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~  107 (290)
T cd05580          74 SNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYA  107 (290)
T ss_pred             CeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999887788887766543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.18  E-value=2.8e-11  Score=83.04  Aligned_cols=91  Identities=15%  Similarity=0.211  Sum_probs=66.8

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH------------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCce
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD------------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHI   79 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i   79 (125)
                      .+.+.|.+.+.+        |.|+||.||++...            .+++.............+.+|+.+++.+ .|+||
T Consensus         9 ~~~~~~~~~~~l--------g~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i   80 (314)
T cd05099           9 FPRDRLVLGKPL--------GEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNI   80 (314)
T ss_pred             ccHHHeeeeeee--------cCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCe
Confidence            445677777888        99999999986421            1111111111111222466799999988 69999


Q ss_pred             eeeeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         80 VGFYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        80 v~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      +++++++.....+|++|||+++|+|.+++...
T Consensus        81 v~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~  112 (314)
T cd05099          81 INLLGVCTQEGPLYVIVEYAAKGNLREFLRAR  112 (314)
T ss_pred             eeEEEEEccCCceEEEEecCCCCcHHHHHHhc
Confidence            99999999888999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.18  E-value=4e-11  Score=82.57  Aligned_cols=93  Identities=17%  Similarity=0.216  Sum_probs=65.9

Q ss_pred             CCCCCCchhHHHHHHH-----HHhhcCCCccc--cHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         31 KLPAGIFTDSFRDFVD-----RCLKKNPSERA--DLKTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      .||.|+||.||++...     .+++.......  .........|..++..+ +||||+.+++++..++.+|++|||+++|
T Consensus         2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   81 (321)
T cd05591           2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG   81 (321)
T ss_pred             ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence            3599999999985321     01111111000  01111344677777764 8999999999999999999999999999


Q ss_pred             CHHHHHHHcCCCCHHHHhhhh
Q psy14717        103 SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|..++...+.+++..+..++
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~  102 (321)
T cd05591          82 DLMFQIQRSRKFDEPRSRFYA  102 (321)
T ss_pred             cHHHHHHHcCCCCHHHHHHHH
Confidence            999999887888888776554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.18  E-value=1.9e-11  Score=83.51  Aligned_cols=97  Identities=19%  Similarity=0.345  Sum_probs=70.2

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      |+.++.+        |.|+||.||++....     +++.......  ......+.+|+.+++.++|+|++++++.+..++
T Consensus         3 y~~~~~l--------~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~   74 (305)
T cd05609           3 FETIKLI--------SNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR   74 (305)
T ss_pred             ceEeeEe--------ecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC
Confidence            4555666        999999999753321     1111111000  011124567899999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      .++++|||+++|+|.++++..+.+++..+..+
T Consensus        75 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~  106 (305)
T cd05609          75 HLCMVMEYVEGGDCATLLKNIGALPVDMARMY  106 (305)
T ss_pred             EEEEEEecCCCCcHHHHHHHcCCCCHHHHHHH
Confidence            99999999999999999988778888776554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.17  E-value=3.9e-11  Score=82.58  Aligned_cols=92  Identities=18%  Similarity=0.262  Sum_probs=66.0

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      ||.|+||.||++....     +++.......  ........+|..++..+ +|+|++++++++...+.+|++|||+++|+
T Consensus         3 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   82 (318)
T cd05570           3 LGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGD   82 (318)
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCC
Confidence            5999999999854321     1111110000  01112345677888776 79999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCHHHHhhhh
Q psy14717        104 LDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~~~l~~~~~~~~~  123 (125)
                      |..++.+.+.+++..+..++
T Consensus        83 L~~~~~~~~~l~~~~~~~~~  102 (318)
T cd05570          83 LMFHIQRSGRFDEPRARFYA  102 (318)
T ss_pred             HHHHHHHcCCCCHHHHHHHH
Confidence            99999887789988776654

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.17  E-value=1.9e-11  Score=82.76  Aligned_cols=89  Identities=18%  Similarity=0.206  Sum_probs=66.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .+.|++.+.+        |+|+||.||++...          .+++.............+.+|+.+++.++|+|++++++
T Consensus         5 ~~~~~i~~~l--------g~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~   76 (288)
T cd05061           5 REKITLLREL--------GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLG   76 (288)
T ss_pred             HHHceeeeee--------cCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEE
Confidence            3567777888        99999999986432          11121111111112234567899999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      .+...+..+++|||+++|+|.+++++.
T Consensus        77 ~~~~~~~~~lv~e~~~~g~L~~~l~~~  103 (288)
T cd05061          77 VVSKGQPTLVVMELMAHGDLKSYLRSL  103 (288)
T ss_pred             EEcCCCCcEEEEeCCCCCCHHHHHHHh
Confidence            999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.17  E-value=2e-11  Score=81.14  Aligned_cols=98  Identities=19%  Similarity=0.170  Sum_probs=73.1

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDI   92 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~   92 (125)
                      ..|++.+.+        |.|+||.||++...   .+++......  .....+.+|+.+++.++|+|++++++.+...+..
T Consensus         6 ~~~~~~~~i--------g~g~~g~v~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   75 (256)
T cd05039           6 KELKLGATI--------GKGEFGDVMLGDYRGQKVAVKCLKDDS--TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPL   75 (256)
T ss_pred             hhccceeee--------ecCCCceEEEEEecCcEEEEEEeccch--hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCe
Confidence            456677777        99999999976432   1112111111  1223567899999999999999999999988899


Q ss_pred             EEEEEecCCCCHHHHHHHcC--CCCHHHHhhhh
Q psy14717         93 SICMEYMDGGSLDLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus        93 ~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~~  123 (125)
                      +++|||+++|+|.++++...  .+++..+..++
T Consensus        76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~  108 (256)
T cd05039          76 YIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFA  108 (256)
T ss_pred             EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHH
Confidence            99999999999999998764  57777766553

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.17  E-value=6.7e-12  Score=85.64  Aligned_cols=99  Identities=15%  Similarity=0.224  Sum_probs=71.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      +.|++++.|        |.|+||.||++...     .+++...............+|+.+++.++|+|++.+++++..+.
T Consensus         5 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   76 (303)
T cd07869           5 DSYEKLEKL--------GEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKE   76 (303)
T ss_pred             ccceEeeeE--------EecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCC
Confidence            467777888        99999999986432     11121111111111224567999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ..+++|||+.+ +|.+++... +.+++..++.++
T Consensus        77 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~  109 (303)
T cd07869          77 TLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFL  109 (303)
T ss_pred             eEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHH
Confidence            99999999975 888888764 567777766544

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.17  E-value=1.2e-11  Score=82.89  Aligned_cols=99  Identities=18%  Similarity=0.290  Sum_probs=71.0

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      .|++.+.+        |.|.||.||++...        .+++.............+..|+.+++.+.|||++++++.+..
T Consensus         5 ~~~~~~~l--------g~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~   76 (269)
T cd05065           5 CVKIEEVI--------GAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK   76 (269)
T ss_pred             HeEEEeEe--------cCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC
Confidence            44555566        99999999975432        112221111111122356789999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +...+++|||+++|+|.++++.. +.+++..+..++
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~  112 (269)
T cd05065          77 SRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGML  112 (269)
T ss_pred             CCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHH
Confidence            99999999999999999999874 457776665543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.17  E-value=4.3e-11  Score=80.74  Aligned_cols=100  Identities=16%  Similarity=0.357  Sum_probs=73.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|+++..+        |.|+||.||++....     +++..... .......+.+|+.+++.+.|+|++++++.+...
T Consensus         4 ~~~~~i~~~l--------g~g~~g~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~   74 (282)
T cd06643           4 EEFWEIIGEL--------GDGAFGKVYKAQNKETGVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAFYYE   74 (282)
T ss_pred             HHHHHHHhhc--------ccCCCeEEEEEEECCCCeEEEEEEeCCC-CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC
Confidence            4567888888        999999999864321     11111111 111222466799999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHH-cCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKK-AGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~-~~~l~~~~~~~~~  123 (125)
                      +..++++||+++|+|..++.+ ...+++..+..++
T Consensus        75 ~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~  109 (282)
T cd06643          75 NNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVC  109 (282)
T ss_pred             CEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHH
Confidence            999999999999999998865 3567877665543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.17  E-value=3.3e-11  Score=83.04  Aligned_cols=92  Identities=18%  Similarity=0.269  Sum_probs=65.7

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      ||+|+||.||++....     +++.......  .........|..++... +|+|++++++++...+.+|++|||+++|+
T Consensus         3 lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~   82 (320)
T cd05590           3 LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGD   82 (320)
T ss_pred             eeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCch
Confidence            5999999999854321     1111111000  00111344677777765 79999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCHHHHhhhh
Q psy14717        104 LDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~~~l~~~~~~~~~  123 (125)
                      |.+++...+.+++..+..++
T Consensus        83 L~~~i~~~~~l~~~~~~~~~  102 (320)
T cd05590          83 LMFHIQKSRRFDEARARFYA  102 (320)
T ss_pred             HHHHHHHcCCCCHHHHHHHH
Confidence            99999887889988776654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.16  E-value=2.9e-11  Score=80.32  Aligned_cols=97  Identities=19%  Similarity=0.259  Sum_probs=68.9

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQD   91 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~   91 (125)
                      |+.++.+        |.|+||.++.....     .+++....... ......+.+|+.+++.++|+|++++++++...+.
T Consensus         2 y~~~~~i--------g~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~   73 (256)
T cd08221           2 YIPIRVL--------GKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNT   73 (256)
T ss_pred             ceEeeEe--------cccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCe
Confidence            4556666        99999987753221     01111111111 1122246689999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHc--CCCCHHHHhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKA--GKIPEHILGTI  122 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~  122 (125)
                      ++++|||+++|+|.+++.+.  ..+++..+..+
T Consensus        74 ~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  106 (256)
T cd08221          74 LLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWY  106 (256)
T ss_pred             EEEEEEecCCCcHHHHHHhccccCCCHHHHHHH
Confidence            99999999999999999875  35777666544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG0199|consensus

Probab=99.16  E-value=1.7e-11  Score=90.51  Aligned_cols=101  Identities=18%  Similarity=0.156  Sum_probs=75.2

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH--------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR--------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .+.+.+.+.+++        |.|+||.|+++.+..        +++.............+.+|+.+|.++.|+|++++||
T Consensus       107 Ipee~i~l~e~L--------G~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyG  178 (1039)
T KOG0199|consen  107 IPEEQIKLYELL--------GEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYG  178 (1039)
T ss_pred             ccHHHHHHHHHh--------cCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEee
Confidence            455677888888        999999999998752        1221111112223346889999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKA--GKIPEHILGTI  122 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~  122 (125)
                      ++.+ ..+.+|+|+++.|||.+.|+..  ..|.-..+..|
T Consensus       179 vVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdy  217 (1039)
T KOG0199|consen  179 VVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDY  217 (1039)
T ss_pred             eecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHH
Confidence            9988 6789999999999999999872  34554444443

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.16  E-value=2.6e-11  Score=81.67  Aligned_cols=99  Identities=18%  Similarity=0.234  Sum_probs=70.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH----------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR----------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      +.|++.+.+        |.|.||.||++.+..          +++.............+.+|+.+++.++|+|+++++++
T Consensus         6 ~~~~~~~~l--------g~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~   77 (277)
T cd05036           6 DSITLLRAL--------GHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGV   77 (277)
T ss_pred             HHcEeeeEC--------CCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            456677777        999999999754321          11111111111222356789999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHcC-------CCCHHHHhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKAG-------KIPEHILGTI  122 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~~-------~l~~~~~~~~  122 (125)
                      +...+..+++|||+++|+|.+++.+.+       .+++..+..+
T Consensus        78 ~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~  121 (277)
T cd05036          78 SFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFC  121 (277)
T ss_pred             EccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHH
Confidence            999889999999999999999998753       3565555443

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.16  E-value=3.3e-11  Score=81.66  Aligned_cols=79  Identities=22%  Similarity=0.340  Sum_probs=59.5

Q ss_pred             CCCCchhHHHHHHHH----------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         33 PAGIFTDSFRDFVDR----------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        33 g~g~fg~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      |.|+||.||++....          +++.............+.+|+.++..+.||||+++++.+...+..++++||+++|
T Consensus         9 g~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   88 (290)
T cd05045           9 GEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYG   88 (290)
T ss_pred             cCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCC
Confidence            999999999865321          1111111111122235678999999999999999999999999999999999999


Q ss_pred             CHHHHHHHc
Q psy14717        103 SLDLILKKA  111 (125)
Q Consensus       103 sL~~~l~~~  111 (125)
                      +|.+++...
T Consensus        89 ~L~~~l~~~   97 (290)
T cd05045          89 SLRSFLRES   97 (290)
T ss_pred             CHHHHHHhc
Confidence            999998763

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.16  E-value=2.6e-11  Score=81.43  Aligned_cols=91  Identities=20%  Similarity=0.288  Sum_probs=67.3

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH----------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR----------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      .+.+.|++.+.+        |.|+||.||++....          +.+.............+.+|+.++..+.|+|++++
T Consensus         3 ~~~~~~~~~~~l--------g~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~   74 (277)
T cd05032           3 LPREKITLIREL--------GQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRL   74 (277)
T ss_pred             cchHHeeEEeEe--------cCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEE
Confidence            345677777788        999999999754321          11111111111122346689999999999999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++++......+++|||+++|+|.+++...
T Consensus        75 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~  103 (277)
T cd05032          75 LGVVSTGQPTLVVMELMAKGDLKSYLRSR  103 (277)
T ss_pred             EEEEcCCCCcEEEEecCCCCCHHHHHHhc
Confidence            99999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.16  E-value=9e-12  Score=84.49  Aligned_cols=99  Identities=19%  Similarity=0.321  Sum_probs=70.6

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ++.|+.++.+        |.|+||.||++...     .+++...............+|+.+++.++|+||+++++++...
T Consensus         4 ~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~   75 (288)
T cd07871           4 LETYVKLDKL--------GEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTE   75 (288)
T ss_pred             cccceEeeEE--------ecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence            4567777888        99999999985431     1111111111111122456899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcC-CCCHHHHhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAG-KIPEHILGTI  122 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~-~l~~~~~~~~  122 (125)
                      +..+++|||+.+ +|.+++...+ .+++..+..+
T Consensus        76 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~  108 (288)
T cd07871          76 RCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIF  108 (288)
T ss_pred             CeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHH
Confidence            999999999986 9999988753 4676665544

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.16  E-value=4.2e-11  Score=79.94  Aligned_cols=91  Identities=18%  Similarity=0.205  Sum_probs=64.8

Q ss_pred             CCCCCchhHHHHHHH-------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVD-------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      +|.|+||.||++...       .+++.............+.+|+.+++.++|+|++++++.+. .+..+++|||+++|+|
T Consensus         3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L   81 (257)
T cd05115           3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPL   81 (257)
T ss_pred             cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCH
Confidence            599999999975321       11222211111112235678999999999999999999875 4568999999999999


Q ss_pred             HHHHHHc-CCCCHHHHhhhh
Q psy14717        105 DLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .+++... ..+++..+.+++
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~  101 (257)
T cd05115          82 NKFLSGKKDEITVSNVVELM  101 (257)
T ss_pred             HHHHHhCCCCCCHHHHHHHH
Confidence            9999763 567887776654

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.16  E-value=6.5e-11  Score=81.81  Aligned_cols=93  Identities=17%  Similarity=0.279  Sum_probs=66.9

Q ss_pred             CCCCCCchhHHHHHHHH-----HhhcCCCcccc--HHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         31 KLPAGIFTDSFRDFVDR-----CLKKNPSERAD--LKTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~--~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      .||+|+||.||++....     +++........  .....+.+|..++..+ +|+|++.+++++...+.+|++|||+++|
T Consensus         2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (327)
T cd05617           2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG   81 (327)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence            35999999999753210     11111111000  1112355788888776 7999999999999999999999999999


Q ss_pred             CHHHHHHHcCCCCHHHHhhhh
Q psy14717        103 SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|..++...+.+++..++.++
T Consensus        82 ~L~~~~~~~~~l~~~~~~~~~  102 (327)
T cd05617          82 DLMFHMQRQRKLPEEHARFYA  102 (327)
T ss_pred             cHHHHHHHcCCCCHHHHHHHH
Confidence            999999887789988877654

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.16  E-value=2.4e-11  Score=81.07  Aligned_cols=99  Identities=45%  Similarity=0.665  Sum_probs=73.8

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD   91 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~   91 (125)
                      .|+..+.|        |.|.||.||++....     +++.............+.+|+.+++.+.|+|++++++.+...+.
T Consensus         2 ~~~~~~~i--------g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   73 (265)
T cd06605           2 DLEYLGEL--------GAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGD   73 (265)
T ss_pred             cchHHHHh--------cCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCE
Confidence            46778888        999999999854321     11111111111222356789999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .++++||+++++|.+++... ..+++..+..++
T Consensus        74 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  106 (265)
T cd06605          74 ISICMEYMDGGSLDKILKEVQGRIPERILGKIA  106 (265)
T ss_pred             EEEEEEecCCCcHHHHHHHccCCCCHHHHHHHH
Confidence            99999999999999999876 677877765543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.16  E-value=2e-11  Score=81.58  Aligned_cols=92  Identities=24%  Similarity=0.435  Sum_probs=68.2

Q ss_pred             CCCCCchhHHHHHHH----HHhhcCCCccc----cH-HhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         32 LPAGIFTDSFRDFVD----RCLKKNPSERA----DL-KTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        32 lg~g~fg~v~~~~~~----~~~~~~~~~~~----~~-~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      +|.|+||.||++...    .+++.......    .. ....+.+|+.+++.++|+|++++++.+......++++||+++|
T Consensus         8 ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (265)
T cd06631           8 LGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGG   87 (265)
T ss_pred             EeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCC
Confidence            499999999986431    11221111100    01 1124668999999999999999999999999999999999999


Q ss_pred             CHHHHHHHcCCCCHHHHhhhh
Q psy14717        103 SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|.+++.+.+.+++..+..++
T Consensus        88 ~L~~~l~~~~~~~~~~~~~~~  108 (265)
T cd06631          88 SISSILNRFGPLPEPVFCKYT  108 (265)
T ss_pred             cHHHHHHhcCCCCHHHHHHHH
Confidence            999999887778887776543

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.16  E-value=2.9e-11  Score=81.35  Aligned_cols=89  Identities=18%  Similarity=0.231  Sum_probs=65.6

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .+.|++.+.+        |.|+||.||.+...          .+++.............+.+|+.+++.++|+|++++++
T Consensus         5 ~~~~~~~~~i--------g~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~   76 (277)
T cd05062           5 REKITMSREL--------GQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG   76 (277)
T ss_pred             HHHceeeeee--------ccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEE
Confidence            3567777777        99999999975432          11111111111112234668999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++......+++|||+++|+|.+++.+.
T Consensus        77 ~~~~~~~~~lv~e~~~~~~L~~~~~~~  103 (277)
T cd05062          77 VVSQGQPTLVIMELMTRGDLKSYLRSL  103 (277)
T ss_pred             EEcCCCCeEEEEecCCCCCHHHHHHHc
Confidence            999888999999999999999999763

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.15  E-value=5.4e-11  Score=79.21  Aligned_cols=98  Identities=20%  Similarity=0.238  Sum_probs=72.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD   91 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~   91 (125)
                      ..|++.+.+        |.|+||.||++...    .+++.....  ......+.+|+.+++.++|+|++++++.+...+.
T Consensus         4 ~~~~~~~~l--------g~G~~~~v~~~~~~~~~~~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   73 (256)
T cd05059           4 SELTFLKEL--------GSGQFGVVHLGKWRGKIDVAIKMIREG--AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRP   73 (256)
T ss_pred             HHcchhhhh--------ccCCCceEEEeEecCCccEEEEEeccC--CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence            357788888        99999999975431    111111111  1112245679999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .+++|||+++|+|.+++... ..++++.+..++
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~  106 (256)
T cd05059          74 IFIVTEYMANGCLLNYLRERKGKLGTEWLLDMC  106 (256)
T ss_pred             eEEEEecCCCCCHHHHHHhcccCCCHHHHHHHH
Confidence            99999999999999999864 457776665543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.15  E-value=5.9e-11  Score=81.68  Aligned_cols=92  Identities=18%  Similarity=0.260  Sum_probs=64.5

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHHHh-cCCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVLHE-CNFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~~~-~~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      ||.|+||.||++....     +++.......  .........|..++.. ..||||+++++++.+.+.++++|||+++|+
T Consensus         3 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~   82 (316)
T cd05619           3 LGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGD   82 (316)
T ss_pred             eeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCc
Confidence            5999999999854321     1111110000  0111124456777765 599999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCHHHHhhhh
Q psy14717        104 LDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~~~l~~~~~~~~~  123 (125)
                      |.++++....+++..+..++
T Consensus        83 L~~~l~~~~~~~~~~~~~~~  102 (316)
T cd05619          83 LMFHIQSCHKFDLPRATFYA  102 (316)
T ss_pred             HHHHHHHcCCCCHHHHHHHH
Confidence            99999987778877766543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.15  E-value=2.1e-11  Score=81.24  Aligned_cols=99  Identities=21%  Similarity=0.316  Sum_probs=72.4

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ..+.|++++++        |.|+||.||++....    +++....  .......+.+|+.+++.++|+|++++++.+...
T Consensus         4 ~~~~~~~~~~l--------g~g~~g~v~~~~~~~~~~v~iK~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   73 (261)
T cd05072           4 PRESIKLVKKL--------GAGQFGEVWMGYYNNSTKVAVKTLKP--GTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE   73 (261)
T ss_pred             chHHeEEeeec--------CCcCCceEEEEEecCCceEEEEEccC--CchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            34577888888        999999999864321    1111111  111223567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA--GKIPEHILGTI  122 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~  122 (125)
                      +..+++|||+++|+|.++++..  ..+++..+..+
T Consensus        74 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  108 (261)
T cd05072          74 EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF  108 (261)
T ss_pred             CCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHH
Confidence            9999999999999999999764  34666554433

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.15  E-value=5.4e-11  Score=81.84  Aligned_cols=92  Identities=17%  Similarity=0.276  Sum_probs=64.4

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHHHh-cCCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVLHE-CNFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~~~-~~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      ||.|+||.||++....     +++.......  .........|..++.. .+||||+++++.+..+..+|++|||+++|+
T Consensus         3 lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~   82 (316)
T cd05592           3 LGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGD   82 (316)
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCc
Confidence            5999999999854310     1111111000  0111123346666654 589999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCHHHHhhhh
Q psy14717        104 LDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~~~l~~~~~~~~~  123 (125)
                      |..+++..+.+++..+..++
T Consensus        83 L~~~~~~~~~~~~~~~~~~~  102 (316)
T cd05592          83 LMFHIQSSGRFDEARARFYA  102 (316)
T ss_pred             HHHHHHHcCCCCHHHHHHHH
Confidence            99999888789988776654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.15  E-value=7.8e-11  Score=78.90  Aligned_cols=92  Identities=18%  Similarity=0.272  Sum_probs=66.4

Q ss_pred             CCCCCCchhHHHHHHHH-----------------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEE
Q psy14717         31 KLPAGIFTDSFRDFVDR-----------------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDIS   93 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~   93 (125)
                      .+|.|.||.||++.+..                 +++..... .......+.+|+.+++.++||||+++++++..+...+
T Consensus         2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS-HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh-hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            35999999999876310                 00110000 0111224567888999999999999999999988899


Q ss_pred             EEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         94 ICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        94 iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ++|||+++|+|..++.+. ..+++..+..++
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~  111 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVA  111 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHH
Confidence            999999999999998764 467887766554

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.15  E-value=5.1e-11  Score=79.37  Aligned_cols=98  Identities=24%  Similarity=0.388  Sum_probs=71.5

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc----HHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD----LKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~----~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      |+..+.+        |.|+||.||.+...     .+++........    .....+.+|+.+++.++|+|++++++++..
T Consensus         4 ~~~~~~l--------g~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   75 (263)
T cd06625           4 WRRGKLL--------GQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD   75 (263)
T ss_pred             cccccee--------cCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc
Confidence            4555566        99999999986432     111111111000    111246689999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +..+++++||+++++|.+++...+.+++..+..++
T Consensus        76 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~  110 (263)
T cd06625          76 DETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYT  110 (263)
T ss_pred             CCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHH
Confidence            99999999999999999999887778877765543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.15  E-value=5.8e-11  Score=81.83  Aligned_cols=92  Identities=15%  Similarity=0.244  Sum_probs=64.5

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHH-HHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILK-VLHECNFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~-~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      ||.|+||.||++....     +++.......  ......+.+|.. +++.++||||+++++.+..++.+|++|||+++|+
T Consensus         3 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~   82 (323)
T cd05575           3 IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGE   82 (323)
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCC
Confidence            5999999999854321     1111111000  011123344544 4566899999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCHHHHhhhh
Q psy14717        104 LDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~~~l~~~~~~~~~  123 (125)
                      |..++...+.+++..++.++
T Consensus        83 L~~~l~~~~~~~~~~~~~~~  102 (323)
T cd05575          83 LFFHLQRERSFPEPRARFYA  102 (323)
T ss_pred             HHHHHHhcCCCCHHHHHHHH
Confidence            99999887788888776554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.15  E-value=2.8e-11  Score=81.51  Aligned_cols=99  Identities=15%  Similarity=0.188  Sum_probs=71.8

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      ..|++.+.|        |+|+||.||++...         .+.+.............+.+|+.++..+.|+|++++++.+
T Consensus         7 ~~~~~~~~i--------g~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   78 (279)
T cd05057           7 TELEKIKVL--------GSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGIC   78 (279)
T ss_pred             HHcEEccee--------cCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence            466777777        99999999985421         0111111111112233567899999999999999999988


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .. ...+++|||+++|+|.+++.+. ..+++..+..++
T Consensus        79 ~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  115 (279)
T cd05057          79 LS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWC  115 (279)
T ss_pred             ec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHH
Confidence            77 6799999999999999999875 457777766554

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.14  E-value=2.8e-11  Score=81.00  Aligned_cols=98  Identities=19%  Similarity=0.277  Sum_probs=70.2

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      .|+..+.+        |.|+||.||++...        .+++.............+.+|+.++..+.|+|++++.+++..
T Consensus         6 ~~~~~~~l--------g~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   77 (268)
T cd05063           6 HITKQKVI--------GAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK   77 (268)
T ss_pred             HceEeeEe--------cCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc
Confidence            44555556        99999999976431        111211111111222356789999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA-GKIPEHILGTI  122 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~  122 (125)
                      .+..+++|||+++|+|.++++.. +.+++..+..+
T Consensus        78 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~  112 (268)
T cd05063          78 FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGM  112 (268)
T ss_pred             CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHH
Confidence            99999999999999999999874 45777665544

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.14  E-value=1.1e-11  Score=83.69  Aligned_cols=99  Identities=18%  Similarity=0.261  Sum_probs=69.2

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCc-cccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSE-RADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      .|++.+.+        |.|+||.||++...     .+++..... ........+.+|+.+++.++|+||+++++++...+
T Consensus         2 ~y~~~~~l--------g~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   73 (287)
T cd07848           2 KFEVLGVV--------GEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRG   73 (287)
T ss_pred             CceEEEEe--------cccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCC
Confidence            35555666        99999999975432     111111111 01111224567999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+|++|||++++++..+.+....+++..++.++
T Consensus        74 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~  106 (287)
T cd07848          74 KLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYI  106 (287)
T ss_pred             EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHH
Confidence            999999999998777666555678887766543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0694|consensus

Probab=99.14  E-value=5.1e-12  Score=92.43  Aligned_cols=100  Identities=19%  Similarity=0.328  Sum_probs=70.4

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCC-ccccHHhhhHHHHHHHHHhc-CCCceeeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPS-ERADLKTLSATTILKVLHEC-NFAHIVGFY   83 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~-~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~   83 (125)
                      ..+.|.++.++        |+|+||+|+.+...        +++++... .+..++  ....|-.|+... +||.+++++
T Consensus       366 ~l~~F~~l~vL--------GkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve--~~~~EkrI~~la~~HPFL~~L~  435 (694)
T KOG0694|consen  366 TLDDFRLLAVL--------GRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVE--SLMCEKRIFELANRHPFLVNLF  435 (694)
T ss_pred             cccceEEEEEe--------ccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHH--HHHHHHHHHHHhccCCeEeecc
Confidence            34567777777        99999999964321        12222111 111111  344577777654 699999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhhc
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITS  124 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~~  124 (125)
                      .+|.+++.+|+||||+.||++..+.+. +.|+|..+++|+.
T Consensus       436 ~~fQT~~~l~fvmey~~Ggdm~~~~~~-~~F~e~rarfyaA  475 (694)
T KOG0694|consen  436 SCFQTKEHLFFVMEYVAGGDLMHHIHT-DVFSEPRARFYAA  475 (694)
T ss_pred             cccccCCeEEEEEEecCCCcEEEEEec-ccccHHHHHHHHH
Confidence            999999999999999999995444433 6899999988863

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.14  E-value=2e-11  Score=81.45  Aligned_cols=98  Identities=18%  Similarity=0.188  Sum_probs=71.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD   91 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~   91 (125)
                      ..|++++.+        |+|.||.||.+...    .+++......  .....+.+|+.++..++|||++++++++.....
T Consensus         4 ~~~~~~~~l--------g~G~~~~vy~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   73 (256)
T cd05113           4 KDLTFLKEL--------GTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRP   73 (256)
T ss_pred             HHeEEeeEe--------cCcccceEEEEEecCCCcEEEEEcCCCc--ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCC
Confidence            356666677        99999999975321    1222221111  112346789999999999999999999998889


Q ss_pred             EEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ++++|||+.+|+|.+++... ..+++..+..++
T Consensus        74 ~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~  106 (256)
T cd05113          74 IYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMC  106 (256)
T ss_pred             cEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHH
Confidence            99999999999999999874 457877665543

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.14  E-value=1e-10  Score=78.97  Aligned_cols=91  Identities=23%  Similarity=0.233  Sum_probs=62.7

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      ||+|+||.||++....     +++.......  .........|+.+++.++|||++++++.+..+...+++|||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            4899999999743210     1111111000  01111334689999999999999999999999999999999999999


Q ss_pred             HHHHHHcC--CCCHHHHhhh
Q psy14717        105 DLILKKAG--KIPEHILGTI  122 (125)
Q Consensus       105 ~~~l~~~~--~l~~~~~~~~  122 (125)
                      .+++....  .+++..+..+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~  100 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHY  100 (277)
T ss_pred             HHHHHhccccCCCHHHHHHH
Confidence            99886543  4666655543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.14  E-value=9e-11  Score=78.14  Aligned_cols=92  Identities=21%  Similarity=0.195  Sum_probs=66.2

Q ss_pred             CCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         31 KLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      .+|.|+||.||++...        .+++.............+.+|+.+++.+.|+|++++++.+. .+..+++|||+++|
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~   80 (257)
T cd05060           2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLG   80 (257)
T ss_pred             ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCC
Confidence            3599999999986431        11121111111112235678999999999999999999775 45689999999999


Q ss_pred             CHHHHHHHcCCCCHHHHhhhh
Q psy14717        103 SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|.+++.+...+++..+..++
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~  101 (257)
T cd05060          81 PLLKYLKKRREIPVSDLKELA  101 (257)
T ss_pred             cHHHHHHhCCCCCHHHHHHHH
Confidence            999999987778877766554

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.14  E-value=3.1e-11  Score=81.72  Aligned_cols=91  Identities=18%  Similarity=0.174  Sum_probs=65.2

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCcccc--HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERAD--LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~~--~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      |+|+||.||++...     .+++........  .....+.+|+.++..++|+|++.+.+.+...+..+++||||++|+|.
T Consensus         9 g~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~   88 (285)
T cd05631           9 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLK   88 (285)
T ss_pred             ecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHH
Confidence            99999999975431     111111111110  11123567999999999999999999999999999999999999999


Q ss_pred             HHHHHc--CCCCHHHHhhhh
Q psy14717        106 LILKKA--GKIPEHILGTIT  123 (125)
Q Consensus       106 ~~l~~~--~~l~~~~~~~~~  123 (125)
                      .++...  ..+++..+..++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~  108 (285)
T cd05631          89 FHIYNMGNPGFDEQRAIFYA  108 (285)
T ss_pred             HHHHhhCCCCCCHHHHHHHH
Confidence            888653  357777766543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.14  E-value=7.2e-11  Score=78.19  Aligned_cols=91  Identities=21%  Similarity=0.322  Sum_probs=65.7

Q ss_pred             CCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHH
Q psy14717         32 LPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI  107 (125)
Q Consensus        32 lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~  107 (125)
                      +|.|+||.||++...    .+++.............+.+|+.++..++|+|++++++.+......+++|||+++|+|.++
T Consensus         3 ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   82 (250)
T cd05085           3 LGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSF   82 (250)
T ss_pred             cCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHH
Confidence            599999999986431    1111111111112223566899999999999999999999999999999999999999999


Q ss_pred             HHHc-CCCCHHHHhhh
Q psy14717        108 LKKA-GKIPEHILGTI  122 (125)
Q Consensus       108 l~~~-~~l~~~~~~~~  122 (125)
                      +... ..+++..+..+
T Consensus        83 ~~~~~~~~~~~~~~~~   98 (250)
T cd05085          83 LRKKKDELKTKQLVKF   98 (250)
T ss_pred             HHhcCCCCCHHHHHHH
Confidence            9764 34666655443

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.14  E-value=7.5e-12  Score=86.42  Aligned_cols=61  Identities=18%  Similarity=0.283  Sum_probs=53.4

Q ss_pred             hHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         63 SATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        63 ~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ...+|+.++..+ +|++|+.+++.+...+.++++|||+.+|+|.+++.+...+++..++.++
T Consensus        50 ~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~  111 (332)
T cd05614          50 HTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYS  111 (332)
T ss_pred             HHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            355788899988 6999999999999999999999999999999999887789988776554

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.14  E-value=3.2e-11  Score=85.42  Aligned_cols=86  Identities=15%  Similarity=0.136  Sum_probs=65.7

Q ss_pred             CCCCCchhHHHHHHHHHhhcCCCccccH---HhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHH
Q psy14717         32 LPAGIFTDSFRDFVDRCLKKNPSERADL---KTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLIL  108 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~~~~~~~~~~~~~---~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l  108 (125)
                      ||.|+||.||++..     ....+..+.   ......+|+.+++.++||||+++++++..+...++++|++. ++|..++
T Consensus       100 lg~G~~g~V~~~~d-----~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l  173 (391)
T PHA03212        100 FTPGAEGFAFACID-----NKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYL  173 (391)
T ss_pred             EcCCCCeEEEEEEE-----CCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHH
Confidence            49999999998533     222221111   12245689999999999999999999999999999999997 5999999


Q ss_pred             HHcCCCCHHHHhhhh
Q psy14717        109 KKAGKIPEHILGTIT  123 (125)
Q Consensus       109 ~~~~~l~~~~~~~~~  123 (125)
                      ...+.+++..+..++
T Consensus       174 ~~~~~l~~~~~~~i~  188 (391)
T PHA03212        174 AAKRNIAICDILAIE  188 (391)
T ss_pred             HhcCCCCHHHHHHHH
Confidence            887778887665543

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.13  E-value=7e-11  Score=81.31  Aligned_cols=92  Identities=14%  Similarity=0.195  Sum_probs=64.4

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHH-HHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILK-VLHECNFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~-~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      ||.|+||.||++....     +++.......  ......+.+|.. +++.++|+||+++++.+...+.+|++|||+++|+
T Consensus         3 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   82 (321)
T cd05603           3 IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGE   82 (321)
T ss_pred             eeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCC
Confidence            5999999999854310     1111111000  011123344544 5677899999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCHHHHhhhh
Q psy14717        104 LDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~~~l~~~~~~~~~  123 (125)
                      |...+.+...+++..++.++
T Consensus        83 L~~~l~~~~~~~~~~~~~~~  102 (321)
T cd05603          83 LFFHLQRERCFLEPRARFYA  102 (321)
T ss_pred             HHHHHHHcCCCCHHHHHHHH
Confidence            99999887788887776654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG4250|consensus

Probab=99.13  E-value=3.5e-11  Score=88.43  Aligned_cols=91  Identities=22%  Similarity=0.263  Sum_probs=64.2

Q ss_pred             CCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC------eEEEEEEec
Q psy14717         31 KLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ------DISICMEYM   99 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~------~~~iv~e~~   99 (125)
                      .||.|+||.||++.+.     .+++...............+|++++++++|+|||+++++=....      ..-++||||
T Consensus        20 ~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC   99 (732)
T KOG4250|consen   20 RLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYC   99 (732)
T ss_pred             hhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeec
Confidence            3499999999986542     12221111111111224568999999999999999998765544      356899999


Q ss_pred             CCCCHHHHHHHc---CCCCHHHHhh
Q psy14717        100 DGGSLDLILKKA---GKIPEHILGT  121 (125)
Q Consensus       100 ~~GsL~~~l~~~---~~l~~~~~~~  121 (125)
                      .+|||...+++.   ..|+|..+.-
T Consensus       100 ~gGsL~~~L~~PEN~~GLpE~e~l~  124 (732)
T KOG4250|consen  100 SGGSLRKVLNSPENAYGLPESEFLD  124 (732)
T ss_pred             CCCcHHHHhcCcccccCCCHHHHHH
Confidence            999999999875   4688877654

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.13  E-value=1.6e-11  Score=81.95  Aligned_cols=92  Identities=23%  Similarity=0.373  Sum_probs=68.6

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCccc---c-H-HhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCC
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSERA---D-L-KTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDG  101 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~~---~-~-~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~  101 (125)
                      +|.|.||.||.+...     .+++.......   . . ....+.+|+.+++.++|+|++++++.+...+..++++||+++
T Consensus         8 lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~   87 (268)
T cd06630           8 LGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAG   87 (268)
T ss_pred             ecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCC
Confidence            399999999975431     11221111110   0 0 123567899999999999999999999999999999999999


Q ss_pred             CCHHHHHHHcCCCCHHHHhhhh
Q psy14717        102 GSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      |+|.+++++.+.+++..+..++
T Consensus        88 ~~L~~~l~~~~~~~~~~~~~~~  109 (268)
T cd06630          88 GSVSHLLSKYGAFKEAVIINYT  109 (268)
T ss_pred             CcHHHHHHHhCCCCHHHHHHHH
Confidence            9999999887788887766543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.13  E-value=8.4e-11  Score=81.08  Aligned_cols=92  Identities=14%  Similarity=0.227  Sum_probs=64.6

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCccc--cHHhhhHHHHHH-HHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSERA--DLKTLSATTILK-VLHECNFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~e~~-~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      ||.|+||.||++...     .+++.......  ......+..|.. +++.++||||+++++.+..++..|++|||+++|+
T Consensus         3 lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~   82 (325)
T cd05604           3 IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGE   82 (325)
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCC
Confidence            599999999975321     01111111100  011123344544 4566899999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCHHHHhhhh
Q psy14717        104 LDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~~~l~~~~~~~~~  123 (125)
                      |..++...+.+++..++.++
T Consensus        83 L~~~l~~~~~~~~~~~~~~~  102 (325)
T cd05604          83 LFFHLQRERSFPEPRARFYA  102 (325)
T ss_pred             HHHHHHHcCCCCHHHHHHHH
Confidence            99999887889988877654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.13  E-value=2e-11  Score=81.08  Aligned_cols=91  Identities=22%  Similarity=0.252  Sum_probs=65.3

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI  107 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~  107 (125)
                      |.|+||.||.+....     +.+...............+|+.+++.++|+|++++++.+...+.+|++|||+++|+|.++
T Consensus         9 g~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~   88 (255)
T cd08219           9 GEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQK   88 (255)
T ss_pred             eccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHH
Confidence            999999998753210     111111111111222456788999999999999999999999999999999999999999


Q ss_pred             HHHc--CCCCHHHHhhhh
Q psy14717        108 LKKA--GKIPEHILGTIT  123 (125)
Q Consensus       108 l~~~--~~l~~~~~~~~~  123 (125)
                      +...  ..++++.+..++
T Consensus        89 ~~~~~~~~~~~~~~~~~~  106 (255)
T cd08219          89 IKLQRGKLFPEDTILQWF  106 (255)
T ss_pred             HHhccCCCCCHHHHHHHH
Confidence            8764  357777665543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.13  E-value=6.7e-11  Score=80.14  Aligned_cols=88  Identities=23%  Similarity=0.335  Sum_probs=64.5

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH----------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR----------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~----------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      ..|.+.+.+        |.|+||.||.+....          +++.... ........+.+|+.++..+.|+|++++++.
T Consensus         5 ~~~~~~~~l--------g~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   75 (288)
T cd05093           5 HNIVLKREL--------GEGAFGKVFLAECYNLCPEQDKILVAVKTLKD-ASDNARKDFHREAELLTNLQHEHIVKFYGV   75 (288)
T ss_pred             HHeeecccc--------CCcCCeeEEeeEeccCCCCCcceEEEEEecCC-cCHHHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence            345566666        999999999864211          0111111 111122246789999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHcC
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKAG  112 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~~  112 (125)
                      +...+..+++|||+++|+|.+++...+
T Consensus        76 ~~~~~~~~lv~e~~~~~~L~~~i~~~~  102 (288)
T cd05093          76 CVEGDPLIMVFEYMKHGDLNKFLRAHG  102 (288)
T ss_pred             EecCCccEEEEEcCCCCCHHHHHHHcC
Confidence            999999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.13  E-value=3.8e-11  Score=80.53  Aligned_cols=80  Identities=13%  Similarity=0.134  Sum_probs=59.1

Q ss_pred             CCCCCchhHHHHHHHH-------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVDR-------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      ||.|+||.||++....       +.+.............+.+|+.+++.++|||++++++.+......+++|||+++|+|
T Consensus         3 lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   82 (268)
T cd05086           3 IGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDL   82 (268)
T ss_pred             CCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcH
Confidence            5999999999753210       111111111111223567888999999999999999999999999999999999999


Q ss_pred             HHHHHHc
Q psy14717        105 DLILKKA  111 (125)
Q Consensus       105 ~~~l~~~  111 (125)
                      .+++++.
T Consensus        83 ~~~l~~~   89 (268)
T cd05086          83 KSYLSQE   89 (268)
T ss_pred             HHHHHhh
Confidence            9999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.12  E-value=2.4e-11  Score=84.41  Aligned_cols=89  Identities=16%  Similarity=0.162  Sum_probs=65.1

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFY   83 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~   83 (125)
                      .++|++.+.|        |.|+||.||++...          .+++.............+.+|+.++..+ +|+|+++++
T Consensus         6 ~~~~~~~~~l--------G~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~   77 (343)
T cd05103           6 RDRLKLGKPL--------GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   77 (343)
T ss_pred             hhHhcccccc--------cCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhc
Confidence            4578898999        99999999986421          1222211111112223566899999998 789999999


Q ss_pred             eeEEeC-CeEEEEEEecCCCCHHHHHHHc
Q psy14717         84 GAFISD-QDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        84 ~~~~~~-~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      +.+... ..++++||||++|+|.++++..
T Consensus        78 ~~~~~~~~~~~lv~ey~~~g~L~~~i~~~  106 (343)
T cd05103          78 GACTKPGGPLMVIVEFCKFGNLSNYLRSK  106 (343)
T ss_pred             ceeecCCCceEEEEeccCCCcHHHHHHhc
Confidence            988654 5689999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.12  E-value=1.5e-10  Score=77.48  Aligned_cols=81  Identities=22%  Similarity=0.306  Sum_probs=60.1

Q ss_pred             CCCCCCchhHHHHHHH-----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEec
Q psy14717         31 KLPAGIFTDSFRDFVD-----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYM   99 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~-----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~   99 (125)
                      .+|.|+||.||++...           .+++.............+.+|+.+++.++|+||+++++++......+++|||+
T Consensus         2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   81 (269)
T cd05044           2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM   81 (269)
T ss_pred             ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence            3599999999976532           11111111111112235668999999999999999999999989999999999


Q ss_pred             CCCCHHHHHHHc
Q psy14717        100 DGGSLDLILKKA  111 (125)
Q Consensus       100 ~~GsL~~~l~~~  111 (125)
                      ++|+|.+++.+.
T Consensus        82 ~~~~L~~~l~~~   93 (269)
T cd05044          82 EGGDLLSYLRDA   93 (269)
T ss_pred             CCCcHHHHHHHh
Confidence            999999999763

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.12  E-value=8.5e-11  Score=78.90  Aligned_cols=80  Identities=19%  Similarity=0.282  Sum_probs=59.3

Q ss_pred             CCCCCchhHHHHHHHH-------HhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRDFVDR-------CLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      +|.|+||.||++....       +++.............+.+|+.++..+ +|||++++++.+...+.+|++|||+++|+
T Consensus         3 lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   82 (270)
T cd05047           3 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGN   82 (270)
T ss_pred             CCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCc
Confidence            5999999999864311       111111111111223566899999988 89999999999999999999999999999


Q ss_pred             HHHHHHHc
Q psy14717        104 LDLILKKA  111 (125)
Q Consensus       104 L~~~l~~~  111 (125)
                      |.+++...
T Consensus        83 L~~~i~~~   90 (270)
T cd05047          83 LLDFLRKS   90 (270)
T ss_pred             HHHHHHhc
Confidence            99999864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.12  E-value=6.6e-11  Score=80.64  Aligned_cols=97  Identities=16%  Similarity=0.287  Sum_probs=70.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      ..|++++.+        |.|+||.||++...     .+++...... ......+.+|+.+++.++|+|++++++.+..+.
T Consensus        19 ~~y~~~~~l--------g~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~   89 (297)
T cd06656          19 KKYTRFEKI--------GQGASGTVYTAIDIATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGD   89 (297)
T ss_pred             hhceeeeee--------ccCCCeEEEEEEECCCCCEEEEEEEecCc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence            466777777        99999999985421     1111111111 112234667999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      ..|++|||+++|+|.+++.+ ..+++..+..+
T Consensus        90 ~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~  120 (297)
T cd06656          90 ELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAV  120 (297)
T ss_pred             EEEEeecccCCCCHHHHHHh-CCCCHHHHHHH
Confidence            99999999999999999976 45777665544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.12  E-value=4e-11  Score=79.90  Aligned_cols=91  Identities=22%  Similarity=0.432  Sum_probs=67.1

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI  107 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~  107 (125)
                      |.|+||.||++...     .+++.............+.+|+.+++.++|+|++++++.+...+..|++||++++++|.++
T Consensus        10 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~   89 (267)
T cd06610          10 GVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDI   89 (267)
T ss_pred             cCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHH
Confidence            99999999986431     1111111111112233567899999999999999999999999999999999999999999


Q ss_pred             HHHc---CCCCHHHHhhhh
Q psy14717        108 LKKA---GKIPEHILGTIT  123 (125)
Q Consensus       108 l~~~---~~l~~~~~~~~~  123 (125)
                      +...   ..+++..+..++
T Consensus        90 ~~~~~~~~~~~~~~~~~~~  108 (267)
T cd06610          90 MKSSYPRGGLDEAIIATVL  108 (267)
T ss_pred             HHHhcccCCCCHHHHHHHH
Confidence            9874   347777765543

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.12  E-value=3.6e-11  Score=82.87  Aligned_cols=91  Identities=18%  Similarity=0.174  Sum_probs=64.2

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCcc--ccHHhhhHHHHHHHHHhcCC-CceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSER--ADLKTLSATTILKVLHECNF-AHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h-~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      |.|+||.||++....     +++......  ..........|..++..+.| ++++.+++++...+.+|++|||+++|+|
T Consensus         9 g~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L   88 (324)
T cd05587           9 GKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL   88 (324)
T ss_pred             eeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcH
Confidence            999999999854321     111111100  00111234568888888765 5688899999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHhhhh
Q psy14717        105 DLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+++...+.+++..+..++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~  107 (324)
T cd05587          89 MYHIQQVGKFKEPHAVFYA  107 (324)
T ss_pred             HHHHHHcCCCCHHHHHHHH
Confidence            9999887788888776654

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.12  E-value=9.9e-11  Score=80.73  Aligned_cols=93  Identities=14%  Similarity=0.180  Sum_probs=64.0

Q ss_pred             CCCCCCchhHHHHHHH-----HHhhcCCCccc--cHHhhhHHHHHH-HHHhcCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         31 KLPAGIFTDSFRDFVD-----RCLKKNPSERA--DLKTLSATTILK-VLHECNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~e~~-~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      .||.|+||.||++...     .+++.......  ......+.+|.. +++.+.|+||+++++.+...+.+|++|||+++|
T Consensus         2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~   81 (325)
T cd05602           2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG   81 (325)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence            3599999999985321     01111111000  011112333443 456789999999999999999999999999999


Q ss_pred             CHHHHHHHcCCCCHHHHhhhh
Q psy14717        103 SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|.+++...+.+++..++.++
T Consensus        82 ~L~~~~~~~~~~~~~~~~~~~  102 (325)
T cd05602          82 ELFYHLQRERCFLEPRARFYA  102 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHH
Confidence            999999887778887776553

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.12  E-value=1.5e-10  Score=76.90  Aligned_cols=91  Identities=19%  Similarity=0.172  Sum_probs=66.6

Q ss_pred             CCCCCCchhHHHHHHHH--------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         31 KLPAGIFTDSFRDFVDR--------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      .+|+|+||.||++.+..        +++.............+.+|+.+++.++|+|++++++.+.. ...+++|||+++|
T Consensus         2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~   80 (257)
T cd05040           2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLG   80 (257)
T ss_pred             cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCC
Confidence            35999999999875421        12221211111222356789999999999999999999988 8899999999999


Q ss_pred             CHHHHHHHcC--CCCHHHHhhh
Q psy14717        103 SLDLILKKAG--KIPEHILGTI  122 (125)
Q Consensus       103 sL~~~l~~~~--~l~~~~~~~~  122 (125)
                      +|.+++.+..  .+++..+..+
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~  102 (257)
T cd05040          81 SLLDRLRKDALGHFLISTLCDY  102 (257)
T ss_pred             cHHHHHHhcccccCcHHHHHHH
Confidence            9999998753  4676666544

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG4279|consensus

Probab=99.12  E-value=1.5e-11  Score=91.00  Aligned_cols=92  Identities=20%  Similarity=0.284  Sum_probs=70.4

Q ss_pred             CCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         30 PKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        30 ~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      -.||+|+||+||.+.+.     .+++..+ ++......-++.|+.+.+.+.|.|||++.|++..+.++-|.||-++||||
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIp-ekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL  659 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIP-EKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL  659 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecc-cccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence            44799999999987653     1222222 22233333577899999999999999999999999999999999999999


Q ss_pred             HHHHHHc-CCC--CHHHHhhh
Q psy14717        105 DLILKKA-GKI--PEHILGTI  122 (125)
Q Consensus       105 ~~~l~~~-~~l--~~~~~~~~  122 (125)
                      .++++.. +++  +|..+.++
T Consensus       660 SsLLrskWGPlKDNEstm~fY  680 (1226)
T KOG4279|consen  660 SSLLRSKWGPLKDNESTMNFY  680 (1226)
T ss_pred             HHHHHhccCCCccchhHHHHH
Confidence            9999875 777  56555544

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.11  E-value=9.6e-11  Score=78.73  Aligned_cols=97  Identities=24%  Similarity=0.431  Sum_probs=70.1

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcC---CCceeeeeeeEEe
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECN---FAHIVGFYGAFIS   88 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~---h~~iv~~~~~~~~   88 (125)
                      .|+.++.+        |.|+||.+|++....     +++.............+.+|+.+++.+.   |+|++++++.+..
T Consensus         2 ~y~~~~~l--------~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~   73 (277)
T cd06917           2 LYQRLELI--------GRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK   73 (277)
T ss_pred             hhhhhhhe--------eccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee
Confidence            46777777        999999999865321     1111111111112224567888888875   9999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      ....+++|||+++++|.++++. +.+++..+..+
T Consensus        74 ~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i  106 (277)
T cd06917          74 GPRLWIIMEYAEGGSVRTLMKA-GPIAEKYISVI  106 (277)
T ss_pred             CCEEEEEEecCCCCcHHHHHHc-cCCCHHHHHHH
Confidence            9999999999999999999877 46887666544

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.11  E-value=4.2e-11  Score=79.70  Aligned_cols=98  Identities=36%  Similarity=0.498  Sum_probs=72.7

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeE
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDI   92 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~   92 (125)
                      |+..+.+        |.|+||.+|++....     +++.............+.+|+..+..++|+|++++++.+..++..
T Consensus         3 ~~~~~~i--------~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (264)
T cd06623           3 LERVKVL--------GQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEI   74 (264)
T ss_pred             ceeeeee--------eecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeE
Confidence            4555666        999999999754321     111111111112233567899999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         93 SICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        93 ~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++||+++++|.+++.....+++..+..++
T Consensus        75 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~  105 (264)
T cd06623          75 SIVLEYMDGGSLADLLKKVGKIPEPVLAYIA  105 (264)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999987778887766654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.11  E-value=1.6e-10  Score=77.83  Aligned_cols=92  Identities=25%  Similarity=0.263  Sum_probs=65.9

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      +|.|+||.||++....     +++.......  ......+.+|+.+++.++|+|++++++.+...+..|++|||+++|+|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            4889999999753221     1111111000  01111345799999999999999999999999999999999999999


Q ss_pred             HHHHHHcC--CCCHHHHhhhh
Q psy14717        105 DLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~~--~l~~~~~~~~~  123 (125)
                      .+++.+..  .+++..+..++
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~  101 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYA  101 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHH
Confidence            99998765  68887766543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.11  E-value=4.1e-11  Score=89.98  Aligned_cols=101  Identities=18%  Similarity=0.232  Sum_probs=74.4

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccH-HhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADL-KTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~-~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      ++.|++++.|        |.|+||.||++...     .+++...... ... ....+.+|+.++..++|+||+++++.+.
T Consensus         3 ~~~y~i~~~L--------G~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~   74 (669)
T cd05610           3 IEEFVIVKPI--------SRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQ   74 (669)
T ss_pred             cCCEEEEEEE--------ecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEE
Confidence            3466777777        99999999985432     1111111110 011 1124567888999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..+.+||+|||+.+|+|.+++...+.+++..++.++
T Consensus        75 ~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~  110 (669)
T cd05610          75 SANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYI  110 (669)
T ss_pred             ECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence            999999999999999999999887778887766554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.11  E-value=7.1e-11  Score=80.44  Aligned_cols=96  Identities=16%  Similarity=0.291  Sum_probs=70.1

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD   91 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~   91 (125)
                      .|+.++.+        |.|.||.||++...     .+++....... .....+.+|+.+++.+.|+|++++++.+.....
T Consensus        21 ~y~~~~~l--------g~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~   91 (296)
T cd06654          21 KYTRFEKI--------GQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDE   91 (296)
T ss_pred             ceeeEEEe--------cCCCCeEEEEEEECCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCE
Confidence            56666666        99999999986421     11111111111 122346689999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      .|++|||+++|+|.+++.+ ..+++..+..+
T Consensus        92 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i  121 (296)
T cd06654          92 LWVVMEYLAGGSLTDVVTE-TCMDEGQIAAV  121 (296)
T ss_pred             EEEeecccCCCCHHHHHHh-cCCCHHHHHHH
Confidence            9999999999999999976 45777665544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.11  E-value=5.5e-11  Score=79.30  Aligned_cols=92  Identities=27%  Similarity=0.270  Sum_probs=68.1

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      +|.|.||.||++....     +++.......  ......+.+|+.+++.+.|+|++++++.+.++..+++++||+++|+|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            4889999999765421     1111111111  11223567899999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHhhhh
Q psy14717        105 DLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+++.+...+++..+..++
T Consensus        81 ~~~l~~~~~l~~~~~~~~~   99 (262)
T cd05572          81 WTILRDRGLFDEYTARFYI   99 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHH
Confidence            9999887778877766554

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.11  E-value=7e-11  Score=79.19  Aligned_cols=91  Identities=20%  Similarity=0.361  Sum_probs=67.2

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCc-----cccH----HhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEE
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSE-----RADL----KTLSATTILKVLHECNFAHIVGFYGAFISDQDISICME   97 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~-----~~~~----~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e   97 (125)
                      +|.|+||.||++....     +++.....     ....    ....+.+|+.+++.++|+|++++++++...+..+++||
T Consensus         9 lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   88 (272)
T cd06629           9 IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLE   88 (272)
T ss_pred             ecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEe
Confidence            4999999999865321     11111100     0000    01145679999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         98 YMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        98 ~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      |+++|+|.+++++.+.+++..++.+
T Consensus        89 ~~~~~~L~~~l~~~~~l~~~~~~~~  113 (272)
T cd06629          89 YVPGGSIGSCLRTYGRFEEQLVRFF  113 (272)
T ss_pred             cCCCCcHHHHHhhccCCCHHHHHHH
Confidence            9999999999988778888776554

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.11  E-value=8.7e-11  Score=77.86  Aligned_cols=93  Identities=18%  Similarity=0.343  Sum_probs=68.6

Q ss_pred             CCCCCCchhHHHHHHHH--------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         31 KLPAGIFTDSFRDFVDR--------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      .+|.|+||.||++....        +++.............+.+|+.+++.+.|+|++++++++.....++++|||+++|
T Consensus         2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   81 (262)
T cd00192           2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG   81 (262)
T ss_pred             ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence            35999999999754321        1111111111111335678999999999999999999999989999999999999


Q ss_pred             CHHHHHHHc---------CCCCHHHHhhhh
Q psy14717        103 SLDLILKKA---------GKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~---------~~l~~~~~~~~~  123 (125)
                      +|.+++...         ..+++..+..++
T Consensus        82 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~  111 (262)
T cd00192          82 DLLDYLRKSRPVFPSPEKSTLSLKDLLSFA  111 (262)
T ss_pred             cHHHHHhhccccccccccccCCHHHHHHHH
Confidence            999999885         567887766554

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.10  E-value=9.6e-11  Score=77.82  Aligned_cols=92  Identities=17%  Similarity=0.301  Sum_probs=65.2

Q ss_pred             CCCCCCchhHHHHHHHHHh-------------hcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEE
Q psy14717         31 KLPAGIFTDSFRDFVDRCL-------------KKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICME   97 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~~~~-------------~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e   97 (125)
                      .||.|+||.||++......             ..............+.+|+.+++.++|+|++++++.+.. ...+++||
T Consensus         2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e   80 (259)
T cd05037           2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEE   80 (259)
T ss_pred             cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEE
Confidence            3599999999976542110             000000011113356688999999999999999999887 67899999


Q ss_pred             ecCCCCHHHHHHHcC-CCCHHHHhhhh
Q psy14717         98 YMDGGSLDLILKKAG-KIPEHILGTIT  123 (125)
Q Consensus        98 ~~~~GsL~~~l~~~~-~l~~~~~~~~~  123 (125)
                      |+++|+|.++++... .+++..+..++
T Consensus        81 ~~~~~~L~~~l~~~~~~~~~~~~~~~~  107 (259)
T cd05037          81 YVKFGPLDVFLHREKNNVSLHWKLDVA  107 (259)
T ss_pred             cCCCCcHHHHHHhhccCCCHHHHHHHH
Confidence            999999999998765 67777665443

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.10  E-value=1e-10  Score=79.00  Aligned_cols=87  Identities=22%  Similarity=0.279  Sum_probs=64.7

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      ..++..+++        |.|+||.||++...          .+++... .........+.+|+.+++.++|+||+++++.
T Consensus         5 ~~~~~~~~l--------g~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   75 (280)
T cd05092           5 RDIVLKWEL--------GEGAFGKVFLAECHNLLPEQDKMLVAVKALK-EASESARQDFQREAELLTVLQHQHIVRFYGV   75 (280)
T ss_pred             Hhceecccc--------CCccCCeEEEeEEecCCCCCCceEEEEEecC-cCCHHHHHHHHHHHHHHhcCCCCCCceEEEE
Confidence            356667777        99999999975311          0111111 1111122356789999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      +......+++|||+++|+|.+++...
T Consensus        76 ~~~~~~~~lv~e~~~~~~L~~~i~~~  101 (280)
T cd05092          76 CTEGRPLLMVFEYMRHGDLNRFLRSH  101 (280)
T ss_pred             EecCCceEEEEecCCCCCHHHHHHhc
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.10  E-value=1.2e-10  Score=80.05  Aligned_cols=93  Identities=16%  Similarity=0.219  Sum_probs=64.9

Q ss_pred             CCCCCCchhHHHHHHHH-----HhhcCCCcc--ccHHhhhHHHHHHHHHh-cCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         31 KLPAGIFTDSFRDFVDR-----CLKKNPSER--ADLKTLSATTILKVLHE-CNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~~-----~~~~~~~~~--~~~~~~~~~~e~~~~~~-~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      .||.|+||.||++....     +++......  ..........|..++.. .+|+|++++++.+...+.+|++|||+.+|
T Consensus         2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g   81 (316)
T cd05620           2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG   81 (316)
T ss_pred             eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence            35999999999754320     111111000  00111134457777765 58999999999999999999999999999


Q ss_pred             CHHHHHHHcCCCCHHHHhhhh
Q psy14717        103 SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|..++...+.+++..+..++
T Consensus        82 ~L~~~i~~~~~~~~~~~~~~~  102 (316)
T cd05620          82 DLMFHIQDKGRFDLYRATFYA  102 (316)
T ss_pred             cHHHHHHHcCCCCHHHHHHHH
Confidence            999999887788887766543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.10  E-value=6.3e-11  Score=80.83  Aligned_cols=90  Identities=14%  Similarity=0.191  Sum_probs=65.9

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH------------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCcee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD------------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIV   80 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv   80 (125)
                      ....|++.+.+        |.|+||.||.+.+.            .+++.............+.+|+.+++.+ +|+|++
T Consensus        13 ~~~~~~~~~~l--------g~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~   84 (304)
T cd05101          13 SRDKLTLGKPL--------GEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNII   84 (304)
T ss_pred             cHHHeeeccee--------eccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCch
Confidence            34566666777        99999999975321            1111111111112223567899999998 899999


Q ss_pred             eeeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         81 GFYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        81 ~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++++.+.....+|++|||+++|+|.+++.+.
T Consensus        85 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  115 (304)
T cd05101          85 NLLGACTQDGPLYVIVEYASKGNLREYLRAR  115 (304)
T ss_pred             heeEEEecCCceEEEEecCCCCcHHHHHHhc
Confidence            9999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.10  E-value=1.9e-10  Score=76.88  Aligned_cols=99  Identities=24%  Similarity=0.391  Sum_probs=71.8

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCc--cccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSE--RADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~--~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      +.|++.+.|        |.|+||.||++...     .+++.....  ........+.+|+.+++.+.|+|++++++.+..
T Consensus         2 ~~y~~~~~i--------g~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~   73 (267)
T cd08229           2 ANFRIEKKI--------GRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE   73 (267)
T ss_pred             chhhhhhhh--------cccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe
Confidence            467788888        99999999986432     111111110  011122356689999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA----GKIPEHILGTI  122 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~  122 (125)
                      ++..+++|||+++|+|.++++..    ..+++..+..+
T Consensus        74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~  111 (267)
T cd08229          74 DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKY  111 (267)
T ss_pred             CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHH
Confidence            99999999999999999998752    35677665544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.10  E-value=4.1e-11  Score=79.96  Aligned_cols=97  Identities=16%  Similarity=0.237  Sum_probs=71.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD   91 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~   91 (125)
                      +.|++.+.+        |+|.||.||++....    +++.....  ......+.+|+.+++.++|+|++++++.+...+.
T Consensus         6 ~~~~~~~~l--------g~g~~~~v~~~~~~~~~~v~iK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   75 (261)
T cd05068           6 TSIQLLRKL--------GAGQFGEVWEGLWNNTTPVAVKTLKPG--TMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEP   75 (261)
T ss_pred             hheeeEEEe--------cccCCccEEEEEecCCeEEEEEeeCCC--cccHHHHHHHHHHHHHCCCCCccceeEEEecCCC
Confidence            456666777        999999999865321    11111111  1122346689999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHcC--CCCHHHHhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKAG--KIPEHILGTI  122 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~  122 (125)
                      .+++|||+++|+|.+++....  .+++..+..+
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  108 (261)
T cd05068          76 IYIVTELMKYGSLLEYLQGGAGRALKLPQLIDM  108 (261)
T ss_pred             eeeeeecccCCcHHHHHhccCCCCCCHHHHHHH
Confidence            999999999999999998753  5676665544

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.09  E-value=1.9e-10  Score=79.94  Aligned_cols=90  Identities=19%  Similarity=0.205  Sum_probs=65.3

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGF   82 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~   82 (125)
                      +.+.|++.+.|        |.|+||.||++...          .+++.............+.+|+.++..+ +|+||+++
T Consensus         5 ~~~~~~i~~~l--------G~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~   76 (337)
T cd05054           5 PRDRLKLGKPL--------GRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNL   76 (337)
T ss_pred             CHHHhhhhccc--------ccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhhe
Confidence            45689999999        99999999986421          1122211111112223456799999998 89999999


Q ss_pred             eeeEEe-CCeEEEEEEecCCCCHHHHHHHc
Q psy14717         83 YGAFIS-DQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        83 ~~~~~~-~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++++.. ...++++|||+++|+|.+++...
T Consensus        77 ~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~  106 (337)
T cd05054          77 LGACTKPGGPLMVIVEYCKFGNLSNYLRSK  106 (337)
T ss_pred             eeeEecCCCCEEEEEecCCCCCHHHHHHhc
Confidence            998865 45699999999999999999753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.09  E-value=1.3e-10  Score=78.42  Aligned_cols=96  Identities=21%  Similarity=0.204  Sum_probs=67.5

Q ss_pred             HHHHHhhcCCCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe-
Q psy14717         19 ELLDYIVNEPPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS-   88 (125)
Q Consensus        19 ~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~-   88 (125)
                      +.++.+        |.|+||.||.+...         .+++.............+.+|+.+++.++|+|++++++.+.. 
T Consensus         7 ~~~~~l--------g~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   78 (283)
T cd05080           7 KKIRVL--------GEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ   78 (283)
T ss_pred             eeceec--------ccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence            666777        99999999653211         111111111111122345689999999999999999998765 


Q ss_pred             -CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 -DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 -~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                       ...++++|||+++|+|.+++... .+++..+..++
T Consensus        79 ~~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~  113 (283)
T cd05080          79 GGKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFA  113 (283)
T ss_pred             CCceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHH
Confidence             34689999999999999999874 58887776654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.09  E-value=4.8e-11  Score=80.85  Aligned_cols=91  Identities=13%  Similarity=0.214  Sum_probs=66.3

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVG   81 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~   81 (125)
                      ...+.|++...+        |+|+||.||++...          .+++.............+.+|+.++..+ +|+|+++
T Consensus         9 ~~~~~~~~~~~i--------g~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~   80 (293)
T cd05053           9 LPRDRLTLGKPL--------GEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIN   80 (293)
T ss_pred             cCHhHeEEeeEe--------cccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeee
Confidence            344577777777        99999999975321          1111111111111223466899999998 8999999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      +++++.....++++|||+++|+|..+++..
T Consensus        81 ~~~~~~~~~~~~li~e~~~~~~L~~~l~~~  110 (293)
T cd05053          81 LLGVCTQEGPLYVVVEYAAHGNLRDFLRAR  110 (293)
T ss_pred             EEEEEcCCCCeEEEEEeCCCCcHHHHHHhc
Confidence            999999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.09  E-value=2.2e-10  Score=75.94  Aligned_cols=101  Identities=20%  Similarity=0.413  Sum_probs=73.9

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccc--cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERA--DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDI   92 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~   92 (125)
                      .+.|+..+.+        |.|.||.+|++.....-.....+..  ......+.+|+.+++.++|+|++++++.+......
T Consensus         2 ~~~y~~~~~i--------~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~   73 (256)
T cd06612           2 EEVFDILEKL--------GEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDL   73 (256)
T ss_pred             cccchhhhhh--------cCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcE
Confidence            3578888888        9999999998543210000000111  11133567899999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         93 SICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        93 ~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      |+++||+++++|.+++... ..+++..+..++
T Consensus        74 ~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~  105 (256)
T cd06612          74 WIVMEYCGAGSVSDIMKITNKTLTEEEIAAIL  105 (256)
T ss_pred             EEEEecCCCCcHHHHHHhCccCCCHHHHHHHH
Confidence            9999999999999999764 457777766554

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.09  E-value=8.9e-11  Score=81.21  Aligned_cols=88  Identities=16%  Similarity=0.210  Sum_probs=64.3

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH------------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD------------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGF   82 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~   82 (125)
                      ..|++.+.|        |.|+||.||.+...            .+++.............+.+|+.++..+ .|+||+++
T Consensus        12 ~~~~i~~~i--------g~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~   83 (334)
T cd05100          12 TRLTLGKPL--------GEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINL   83 (334)
T ss_pred             hHeeeccee--------ccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeee
Confidence            456667777        99999999975321            0111111111111123567899999998 89999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++.+...+.+++++||+++|+|.+++.+.
T Consensus        84 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  112 (334)
T cd05100          84 LGACTQDGPLYVLVEYASKGNLREYLRAR  112 (334)
T ss_pred             eEEEccCCceEEEEecCCCCcHHHHHHhc
Confidence            99999988999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.09  E-value=4.8e-11  Score=79.48  Aligned_cols=100  Identities=20%  Similarity=0.245  Sum_probs=73.5

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      .+.+.|++.+.+        |.|+||.||++...    .+++.....  ......+.+|+.+++.++|+|++++++.+..
T Consensus         3 ~~~~~~~i~~~i--------g~g~~~~v~~~~~~~~~~~~vK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   72 (261)
T cd05034           3 IPRESLKLERKL--------GAGQFGEVWMGTWNGTTKVAVKTLKPG--TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSE   72 (261)
T ss_pred             cchhheeeeeee--------ccCcceEEEEEEEcCCceEEEEEecCC--ccCHHHHHHHHHHHhhCCCCCEeeeeeeeec
Confidence            345677788888        99999999975432    111111111  1122356789999999999999999999998


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA--GKIPEHILGTI  122 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~  122 (125)
                      ....+++|||+++|+|.+++...  ..+++..+..+
T Consensus        73 ~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~  108 (261)
T cd05034          73 EEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDM  108 (261)
T ss_pred             CCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHH
Confidence            88999999999999999999874  25676665544

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.09  E-value=7.7e-11  Score=79.93  Aligned_cols=86  Identities=21%  Similarity=0.251  Sum_probs=63.1

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      .|.+.+.+        |.|+||.||.+...          .+++..... .......+.+|+.+++.++|+|++++++.+
T Consensus         6 ~~~~~~~l--------g~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   76 (291)
T cd05094           6 DIVLKREL--------GEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP-TLAARKDFQREAELLTNLQHEHIVKFYGVC   76 (291)
T ss_pred             HeEEeeee--------cccCCCeEEEeEeeccCCCCcceeeEEEecCCc-cHHHHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence            44555566        99999999976421          011111111 111223467899999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ......+++|||+++|+|.++++.+
T Consensus        77 ~~~~~~~lv~e~~~~~~L~~~i~~~  101 (291)
T cd05094          77 GDGDPLIMVFEYMKHGDLNKFLRAH  101 (291)
T ss_pred             ccCCceEEEEecCCCCcHHHHHHhc
Confidence            9999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.09  E-value=5.9e-11  Score=80.76  Aligned_cols=87  Identities=22%  Similarity=0.279  Sum_probs=62.7

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-------HhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeeeeEEe
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-------CLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYGAFIS   88 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~   88 (125)
                      .|++.+.|        |.|+||.||++....       +.+.............+.+|+.++.++ +|||++++++++..
T Consensus         3 ~~~~~~~l--------g~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~   74 (297)
T cd05089           3 DIKFEDVI--------GEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACEN   74 (297)
T ss_pred             cceeeeee--------cCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc
Confidence            45555666        999999999864321       111111111111122467899999888 79999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      .+.+|+++||+++|+|.+++...
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~   97 (297)
T cd05089          75 RGYLYIAIEYAPYGNLLDFLRKS   97 (297)
T ss_pred             CCcceEEEEecCCCcHHHHHHhc
Confidence            88999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.08  E-value=2e-10  Score=76.70  Aligned_cols=93  Identities=19%  Similarity=0.354  Sum_probs=68.2

Q ss_pred             CCCCCCchhHHHHHHHH-----HhhcCCCcccc----H-H---hhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEE
Q psy14717         31 KLPAGIFTDSFRDFVDR-----CLKKNPSERAD----L-K---TLSATTILKVLHECNFAHIVGFYGAFISDQDISICME   97 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~----~-~---~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e   97 (125)
                      .+|.|+||.||.+....     +++........    . .   ...+.+|+.+++.++|+|++++++.+...+..+++||
T Consensus         7 ~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (267)
T cd06628           7 LIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLE   86 (267)
T ss_pred             eeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEE
Confidence            34999999999864321     11111110000    0 0   1246689999999999999999999999999999999


Q ss_pred             ecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         98 YMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        98 ~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      |+++++|.+++++.+.+++..+..++
T Consensus        87 ~~~~~~L~~~l~~~~~l~~~~~~~~~  112 (267)
T cd06628          87 YVPGGSVAALLNNYGAFEETLVRNFV  112 (267)
T ss_pred             ecCCCCHHHHHHhccCccHHHHHHHH
Confidence            99999999999987778887765543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.08  E-value=2.4e-11  Score=80.91  Aligned_cols=91  Identities=15%  Similarity=0.227  Sum_probs=67.7

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCccc-c-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSERA-D-LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~~-~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      |.|+||.||++....     +++....... . .....+.+|+.+++.++|||++++++.+..+...++++||+.+++|.
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   88 (258)
T cd05578           9 GKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLR   88 (258)
T ss_pred             ccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHH
Confidence            999999999754321     1111111100 1 11225668999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCHHHHhhhh
Q psy14717        106 LILKKAGKIPEHILGTIT  123 (125)
Q Consensus       106 ~~l~~~~~l~~~~~~~~~  123 (125)
                      +++.....+++..+..++
T Consensus        89 ~~l~~~~~l~~~~~~~~~  106 (258)
T cd05578          89 YHLSQKVKFSEEQVKFWI  106 (258)
T ss_pred             HHHHhcCCcCHHHHHHHH
Confidence            999887678887776654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.08  E-value=2e-10  Score=79.29  Aligned_cols=92  Identities=21%  Similarity=0.291  Sum_probs=63.9

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccc-c-HHhhhHHHHHHHHHhc---CCCceeeeeeeEEeCCeEEEEEEecCC
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERA-D-LKTLSATTILKVLHEC---NFAHIVGFYGAFISDQDISICMEYMDG  101 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~-~-~~~~~~~~e~~~~~~~---~h~~iv~~~~~~~~~~~~~iv~e~~~~  101 (125)
                      ||.|+||.||++....     +++....... . ........|..++...   .||||+.+++.+...+.+|++|||+.+
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            4899999999753310     1111111000 0 0111233466666553   799999999999999999999999999


Q ss_pred             CCHHHHHHHcCCCCHHHHhhhh
Q psy14717        102 GSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      |+|..++.+.+.+++..++.++
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~  102 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYI  102 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHH
Confidence            9999999888889988876654

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0608|consensus

Probab=99.08  E-value=7.8e-11  Score=86.51  Aligned_cols=60  Identities=20%  Similarity=0.387  Sum_probs=54.4

Q ss_pred             HHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         64 ATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        64 ~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +..|-.|+....+..||+++.+|.+++.+|+||||++||++..+|-+-+.|.|..++++.
T Consensus       676 VKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYI  735 (1034)
T KOG0608|consen  676 VKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYI  735 (1034)
T ss_pred             hhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHH
Confidence            446777888889999999999999999999999999999999999888899998888765

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.08  E-value=3.5e-10  Score=75.77  Aligned_cols=101  Identities=21%  Similarity=0.425  Sum_probs=72.1

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeeeeE
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYGAF   86 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~   86 (125)
                      .+.+.|+..+.+        |.|+||.||++....     +++....  .......+.+|+.+++.+ +|+|++++++.+
T Consensus         3 ~~~~~y~~~~~l--------g~g~~g~vy~~~~~~~~~~~aik~~~~--~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~   72 (272)
T cd06637           3 DPAGIFELVELV--------GNGTYGQVYKGRHVKTGQLAAIKVMDV--TGDEEEEIKQEINMLKKYSHHRNIATYYGAF   72 (272)
T ss_pred             ChhhhhhHHHhe--------eecCCeEEEEEEEcCCCcEEEEEEEEc--CCccHHHHHHHHHHHHHhcCCCCeeeEeeEE
Confidence            356688998888        999999999854321     1111111  111223466888888887 799999999998


Q ss_pred             EeC------CeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         87 ISD------QDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~------~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      ...      ...|++|||+++|+|.+++...  ..+++..+..++
T Consensus        73 ~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~  117 (272)
T cd06637          73 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC  117 (272)
T ss_pred             eecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHH
Confidence            763      4589999999999999999874  357777665543

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>KOG0585|consensus

Probab=99.08  E-value=2.8e-11  Score=85.84  Aligned_cols=104  Identities=13%  Similarity=0.208  Sum_probs=72.2

Q ss_pred             CCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCC----------ccccHH---hhhHHHHHHHHH
Q psy14717         11 VPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPS----------ERADLK---TLSATTILKVLH   72 (125)
Q Consensus        11 ~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~----------~~~~~~---~~~~~~e~~~~~   72 (125)
                      .....+.|+++..|        |+|+||.|-.++..     .+++..+.          .+.+..   ...+.+|+.+|+
T Consensus        92 ~~k~lNqy~l~~ei--------G~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailK  163 (576)
T KOG0585|consen   92 DRKQLNQYELIKEI--------GSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILK  163 (576)
T ss_pred             cceehhheehhhhh--------cCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHH
Confidence            33455788999999        99999999876653     11111110          111111   114678999999


Q ss_pred             hcCCCceeeeeeeEEeCC--eEEEEEEecCCCCHHHHHHHcCC-CCHHHHhhhh
Q psy14717         73 ECNFAHIVGFYGAFISDQ--DISICMEYMDGGSLDLILKKAGK-IPEHILGTIT  123 (125)
Q Consensus        73 ~~~h~~iv~~~~~~~~~~--~~~iv~e~~~~GsL~~~l~~~~~-l~~~~~~~~~  123 (125)
                      ++.|+|||+++++.-+++  .+|+|+|||..|.+...-.. .. +++++++++.
T Consensus       164 kl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d-~~els~~~Ar~yl  216 (576)
T KOG0585|consen  164 KLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPD-KPELSEQQARKYL  216 (576)
T ss_pred             hcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCC-cccccHHHHHHHH
Confidence            999999999999998754  59999999999987552222 34 7777777654

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.08  E-value=1.4e-10  Score=78.40  Aligned_cols=89  Identities=19%  Similarity=0.240  Sum_probs=65.6

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .++|+....+        |.|+||.||++...          .+++.............+.+|+.++..+.|+|++++++
T Consensus         4 ~~~~~~~~~l--------g~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~   75 (288)
T cd05050           4 RNNIEYVRDI--------GQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLG   75 (288)
T ss_pred             hHhceecccc--------cccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEE
Confidence            3466777777        99999999985321          11111111111112234668999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++......++++||+++|+|.+++...
T Consensus        76 ~~~~~~~~~lv~e~~~~~~L~~~l~~~  102 (288)
T cd05050          76 VCAVGKPMCLLFEYMAYGDLNEFLRHR  102 (288)
T ss_pred             EEcCCCccEEEEecCCCCCHHHHHHHc
Confidence            999988999999999999999999864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.08  E-value=8.2e-11  Score=81.08  Aligned_cols=91  Identities=16%  Similarity=0.182  Sum_probs=63.8

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCccc--cHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERA--DLKTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      |+|+||.||++...     .+++.......  .........|..++..+ +|++++.+++++...+.+|++|||+++|+|
T Consensus         9 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L   88 (323)
T cd05616           9 GKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL   88 (323)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCH
Confidence            99999999975321     01111111000  01111344566777665 689999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHhhhh
Q psy14717        105 DLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..++...+.+++..+..++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~  107 (323)
T cd05616          89 MYQIQQVGRFKEPHAVFYA  107 (323)
T ss_pred             HHHHHHcCCCCHHHHHHHH
Confidence            9999887788888776554

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.08  E-value=9.4e-11  Score=78.36  Aligned_cols=99  Identities=22%  Similarity=0.322  Sum_probs=69.5

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCc---cccH-HhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSE---RADL-KTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~---~~~~-~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .|++.+.+        |.|+||.||.+...     .+++.....   .... ....+.+|+.+++.+.|+|++++++++.
T Consensus         3 ~~~~~~~l--------~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   74 (265)
T cd06652           3 NWRLGKLL--------GQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLR   74 (265)
T ss_pred             cceEeeEE--------ecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEec
Confidence            34555666        99999999975432     111111110   0011 1224568999999999999999999887


Q ss_pred             eC--CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         88 SD--QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        88 ~~--~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..  ..++++|||+++|+|.+++.+...+++..+..++
T Consensus        75 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~  112 (265)
T cd06652          75 DPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYT  112 (265)
T ss_pred             cCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            64  5689999999999999999887778877765543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.07  E-value=1.3e-10  Score=77.58  Aligned_cols=98  Identities=24%  Similarity=0.398  Sum_probs=69.4

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCC-cccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPS-ERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~-~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .|++.+.+        |.|+||.||++...     .+++.... .... .....+.+|+.+++.++|+|++++++.+...
T Consensus         3 ~~~i~~~l--------~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   74 (267)
T cd08228           3 NFQIEKKI--------GRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED   74 (267)
T ss_pred             ceeeeeee--------ccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC
Confidence            45666667        99999999975432     11111111 1111 1222467899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA----GKIPEHILGTI  122 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~  122 (125)
                      +..++++||+++|+|.+++...    ..++++.+..+
T Consensus        75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~  111 (267)
T cd08228          75 NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKY  111 (267)
T ss_pred             CeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHH
Confidence            9999999999999999988642    34676665544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.07  E-value=1.2e-10  Score=78.87  Aligned_cols=90  Identities=18%  Similarity=0.176  Sum_probs=64.2

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCccc-cH-HhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSERA-DL-KTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~~-~~-~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      |.|+||.||++....     +++....... .. ....+.+|+.+++.++|++++.+++.+...+.++++|||+++|+|.
T Consensus         9 g~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~   88 (285)
T cd05630           9 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLK   88 (285)
T ss_pred             ecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHH
Confidence            999999999754321     1111111100 11 1123457999999999999999999999999999999999999999


Q ss_pred             HHHHHc--CCCCHHHHhhh
Q psy14717        106 LILKKA--GKIPEHILGTI  122 (125)
Q Consensus       106 ~~l~~~--~~l~~~~~~~~  122 (125)
                      +++...  ..+++..+..+
T Consensus        89 ~~l~~~~~~~l~~~~~~~~  107 (285)
T cd05630          89 FHIYHMGEAGFEEGRAVFY  107 (285)
T ss_pred             HHHHHhcccCCCHHHHHHH
Confidence            998654  35777666554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.07  E-value=5.9e-11  Score=81.46  Aligned_cols=99  Identities=12%  Similarity=0.169  Sum_probs=70.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      ...|+.++.+        |+|+||.||++.+.         .+++.............+.+|+.+++.+.|+||+++++.
T Consensus         6 ~~~f~~~~~l--------g~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~   77 (316)
T cd05108           6 ETEFKKIKVL--------GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI   77 (316)
T ss_pred             hhhceeeeee--------ecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            3467777788        99999999986431         112221111111222356689999999999999999998


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTI  122 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~  122 (125)
                      +... ..++++||+++|+|.++++.. ..+++..+..+
T Consensus        78 ~~~~-~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~  114 (316)
T cd05108          78 CLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW  114 (316)
T ss_pred             EcCC-CceeeeecCCCCCHHHHHHhccccCCHHHHHHH
Confidence            8765 578999999999999999875 35676655544

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.07  E-value=4.5e-11  Score=82.40  Aligned_cols=90  Identities=14%  Similarity=0.200  Sum_probs=61.5

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCcc-c-cHHhhhHHHHHHHH---HhcCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSER-A-DLKTLSATTILKVL---HECNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~-~-~~~~~~~~~e~~~~---~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      |.|+||.||++...     .+++...... . ......+.+|..++   +.+.||||+++++++...+.+|++|||+.+|
T Consensus         8 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   87 (324)
T cd05589           8 GRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGG   87 (324)
T ss_pred             eecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCC
Confidence            99999999975321     0111111000 0 01112344555544   4578999999999999999999999999999


Q ss_pred             CHHHHHHHcCCCCHHHHhhhh
Q psy14717        103 SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|..+++. +.+++..+..++
T Consensus        88 ~L~~~~~~-~~l~~~~~~~~~  107 (324)
T cd05589          88 DLMMHIHT-DVFSEPRAVFYA  107 (324)
T ss_pred             cHHHHhhc-CCCCHHHHHHHH
Confidence            99998876 568887776554

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.07  E-value=9.3e-11  Score=79.15  Aligned_cols=99  Identities=13%  Similarity=0.119  Sum_probs=67.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      ..|+.++.|        |.|+||.||++...         .+++.............+..|+..+..+.|+||+++++++
T Consensus         7 ~~~~~~~~l--------g~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~   78 (279)
T cd05111           7 TELRKLKLL--------GSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGIC   78 (279)
T ss_pred             hhceecccc--------CccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence            466677777        99999999986431         0111111111111112455677788889999999999987


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      . ....++++||+++|+|.++++.. +.+++..+..++
T Consensus        79 ~-~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~  115 (279)
T cd05111          79 P-GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWC  115 (279)
T ss_pred             C-CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHH
Confidence            5 44578999999999999999874 567887766554

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.07  E-value=2.2e-11  Score=80.83  Aligned_cols=91  Identities=23%  Similarity=0.313  Sum_probs=66.5

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |+|+||.||++....     +.+........ .......+|+.++..++|+||+++++.+......+++||++++++|.+
T Consensus         8 g~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~   87 (260)
T PF00069_consen    8 GSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQD   87 (260)
T ss_dssp             EEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHH
T ss_pred             EeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccccccccc
Confidence            999999999853321     11111111111 111123458999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCHHHHhhhh
Q psy14717        107 ILKKAGKIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~~~~l~~~~~~~~~  123 (125)
                      ++.....+++..+..++
T Consensus        88 ~l~~~~~~~~~~~~~~~  104 (260)
T PF00069_consen   88 YLQKNKPLSEEEILKIA  104 (260)
T ss_dssp             HHHHHSSBBHHHHHHHH
T ss_pred             ccccccccccccccccc
Confidence            99966788887776654

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>KOG4717|consensus

Probab=99.07  E-value=7.1e-10  Score=80.03  Aligned_cols=101  Identities=16%  Similarity=0.147  Sum_probs=77.4

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCC-ccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPS-ERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~-~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ...|++-+.+        |+|.|..|-.+.+..     +++.... +......-.+.+|+.+|+-.+|||||++|++...
T Consensus        17 AGLYDLekTl--------G~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDT   88 (864)
T KOG4717|consen   17 AGLYDLEKTL--------GRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDT   88 (864)
T ss_pred             eeeehhhhhh--------cCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcc
Confidence            3466666667        999999888776632     2222222 2223334467899999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ...+|+|+|+=.+|+|++||-.+ ..+.|...++|+
T Consensus        89 QTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF  124 (864)
T KOG4717|consen   89 QTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYF  124 (864)
T ss_pred             cceEEEEEEecCCchHHHHHHhhhccccHHHHHHHH
Confidence            99999999999999999999876 578887776654

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.07  E-value=5.4e-11  Score=81.38  Aligned_cols=99  Identities=18%  Similarity=0.308  Sum_probs=70.3

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ++.|++++.+        |.|+||.||++...     .+++...............+|+.+++.++|+|++++++++..+
T Consensus         5 ~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   76 (309)
T cd07872           5 METYIKLEKL--------GEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTD   76 (309)
T ss_pred             CCceEEEEEe--------cccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeC
Confidence            4567777778        99999999986432     1112111111111112355799999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA-GKIPEHILGTI  122 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~  122 (125)
                      +..+++|||+++ +|.+++... ..+++..++.+
T Consensus        77 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~  109 (309)
T cd07872          77 KSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIF  109 (309)
T ss_pred             CeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHH
Confidence            999999999997 898888765 34676665544

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.07  E-value=2.1e-10  Score=77.47  Aligned_cols=98  Identities=19%  Similarity=0.219  Sum_probs=68.8

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .|+.++.+        |+|+||.||.+...         .+++.............+.+|+.+++.+.|+|++++++++.
T Consensus         5 ~~~~~~~l--------g~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   76 (284)
T cd05079           5 FLKRIRDL--------GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICT   76 (284)
T ss_pred             hhhhceec--------CCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEe
Confidence            56777788        99999999864311         11121111111111225678999999999999999999887


Q ss_pred             eC--CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhh
Q psy14717         88 SD--QDISICMEYMDGGSLDLILKKA-GKIPEHILGTI  122 (125)
Q Consensus        88 ~~--~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~  122 (125)
                      ..  ...+++|||+++|+|.+++.+. ..+++..+..+
T Consensus        77 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i  114 (284)
T cd05079          77 EDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKY  114 (284)
T ss_pred             cCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHH
Confidence            75  5689999999999999999764 34676655443

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG4236|consensus

Probab=99.07  E-value=1.2e-10  Score=84.05  Aligned_cols=95  Identities=20%  Similarity=0.291  Sum_probs=71.4

Q ss_pred             CCCCCCCCCchhHHHHHHH-----HHhhcCCCccccH-HhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCC
Q psy14717         28 PPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADL-KTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDG  101 (125)
Q Consensus        28 ~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~  101 (125)
                      ....||+|.||.||-+.+.     .+++...+.+..- ....+.+|+.++..++||.||.+-..|++++.+++|||-+.|
T Consensus       568 ~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G  647 (888)
T KOG4236|consen  568 ADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG  647 (888)
T ss_pred             hHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence            4456799999999988764     2444444433332 333567899999999999999999999999999999999999


Q ss_pred             CCHHHHHHHc-CCCCHHHHhhh
Q psy14717        102 GSLDLILKKA-GKIPEHILGTI  122 (125)
Q Consensus       102 GsL~~~l~~~-~~l~~~~~~~~  122 (125)
                      .=|+-+|.+. ++++|...+++
T Consensus       648 DMLEMILSsEkgRL~er~TkFl  669 (888)
T KOG4236|consen  648 DMLEMILSSEKGRLPERITKFL  669 (888)
T ss_pred             hHHHHHHHhhcccchHHHHHHH
Confidence            4444444443 78988776654

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.06  E-value=1.7e-10  Score=77.85  Aligned_cols=104  Identities=19%  Similarity=0.400  Sum_probs=71.1

Q ss_pred             CCCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeee
Q psy14717          9 SNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGF   82 (125)
Q Consensus         9 ~~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~   82 (125)
                      +..+...+.|++++.|        |.|+||.||++....     +++....  .......+.+|+.+++.+ +|+|++++
T Consensus        11 ~~~~~~~~~~~~~~~l--------g~g~~~~vy~~~~~~~~~~~~ik~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~   80 (286)
T cd06638          11 DSFPDPSDTWEIIETI--------GKGTYGKVFKVLNKKNGSKAAVKILDP--IHDIDEEIEAEYNILKALSDHPNVVKF   80 (286)
T ss_pred             ecCCCcccceeeeeee--------ccCCCcEEEEEEECCCCceeEEEeecc--ccchHHHHHHHHHHHHHHhcCCCeeee
Confidence            3345566788888888        999999999753311     1111110  011112456788888888 79999999


Q ss_pred             eeeEE-----eCCeEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhh
Q psy14717         83 YGAFI-----SDQDISICMEYMDGGSLDLILKKA----GKIPEHILGTI  122 (125)
Q Consensus        83 ~~~~~-----~~~~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~  122 (125)
                      ++.+.     ..+..+++|||+++|+|.+++...    ..+++..+..+
T Consensus        81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~  129 (286)
T cd06638          81 YGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYI  129 (286)
T ss_pred             eeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHH
Confidence            99874     345699999999999999988642    35676665544

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG0662|consensus

Probab=99.06  E-value=8.6e-11  Score=74.61  Aligned_cols=98  Identities=18%  Similarity=0.302  Sum_probs=71.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH----Hh--hhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL----KT--LSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~----~~--~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ..|+.+++|        |.|+||+||++.....-+....++...    +.  -...+|+-+++.++|.|||+++++...+
T Consensus         2 ~~ydkmeki--------gegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsd   73 (292)
T KOG0662|consen    2 QKYDKMEKI--------GEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD   73 (292)
T ss_pred             cchHHHHhh--------cCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccC
Confidence            457788899        999999999975431111111111100    00  1356899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA-GKIPEHILGTI  122 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~  122 (125)
                      ..+-+|.|||.. +|..+.... +.+..+.++.+
T Consensus        74 kkltlvfe~cdq-dlkkyfdslng~~d~~~~rsf  106 (292)
T KOG0662|consen   74 KKLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSF  106 (292)
T ss_pred             ceeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHH
Confidence            999999999999 999988875 56666655543

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.06  E-value=1.1e-10  Score=78.63  Aligned_cols=99  Identities=21%  Similarity=0.331  Sum_probs=70.6

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      .|+....+        |.|+||.||++...     .+++........ .....+.+|+.+++.+.|+|++++++.+..+.
T Consensus         2 ~y~~~~~l--------~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~   73 (286)
T cd07847           2 KYEKLSKI--------GEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR   73 (286)
T ss_pred             ceeeeeee--------cccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC
Confidence            34555666        99999999985431     011111110000 11123568999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..+++|||+++++|..++.....+++..+..++
T Consensus        74 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~  106 (286)
T cd07847          74 KLHLVFEYCDHTVLNELEKNPRGVPEHLIKKII  106 (286)
T ss_pred             EEEEEEeccCccHHHHHHhCCCCCCHHHHHHHH
Confidence            999999999999998888776678887776654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.06  E-value=7.5e-11  Score=81.36  Aligned_cols=92  Identities=18%  Similarity=0.188  Sum_probs=64.5

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCccc--cHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSERA--DLKTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      ||.|+||.||++...     .+++.......  .........|..++..+ +|++++.+++++...+.+|++|||+++|+
T Consensus         8 lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~   87 (323)
T cd05615           8 LGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGD   87 (323)
T ss_pred             EEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCc
Confidence            399999999985321     11111111000  01111345677777776 46778889999999999999999999999


Q ss_pred             HHHHHHHcCCCCHHHHhhhh
Q psy14717        104 LDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~~~l~~~~~~~~~  123 (125)
                      |..++.+.+.+++..+..++
T Consensus        88 L~~~i~~~~~l~~~~~~~i~  107 (323)
T cd05615          88 LMYHIQQVGKFKEPQAVFYA  107 (323)
T ss_pred             HHHHHHHcCCCCHHHHHHHH
Confidence            99999988889988877654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.06  E-value=2.2e-10  Score=76.43  Aligned_cols=99  Identities=20%  Similarity=0.348  Sum_probs=70.5

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCC-ccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPS-ERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~-~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .|++.+.+        |.|+||.||++...     .+++.... ... ......+.+|+.+++.++|+|++++++.+...
T Consensus         3 ~y~~~~~l--------g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~   74 (267)
T cd08224           3 NFKIEKKI--------GKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN   74 (267)
T ss_pred             ceeeeeee--------ccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC
Confidence            34555566        99999999986542     11111111 111 11133567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~~  123 (125)
                      +..+++|||+++|+|..++.+.    ..++++.+..++
T Consensus        75 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~  112 (267)
T cd08224          75 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYF  112 (267)
T ss_pred             CeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHH
Confidence            9999999999999999998753    346776665543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.06  E-value=1.3e-10  Score=78.40  Aligned_cols=97  Identities=20%  Similarity=0.231  Sum_probs=67.6

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .|+.++.+        |+|+||.||++...         .+++..... .......+.+|+.+++.++|+|++++++++.
T Consensus         5 ~~~~~~~l--------g~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   75 (284)
T cd05081           5 HLKFIQQL--------GKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS-TAEHLRDFEREIEILKSLQHDNIVKYKGVCY   75 (284)
T ss_pred             cceeeeec--------cCCCCceEEEEEecCCcCCCCcEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEc
Confidence            56666777        99999999975311         111111111 1112225678999999999999999999875


Q ss_pred             eC--CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhh
Q psy14717         88 SD--QDISICMEYMDGGSLDLILKKA-GKIPEHILGTI  122 (125)
Q Consensus        88 ~~--~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~  122 (125)
                      ..  ..+++++||+++|+|.+++.+. ..+++..+..+
T Consensus        76 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~  113 (284)
T cd05081          76 SAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLY  113 (284)
T ss_pred             cCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHH
Confidence            43  4689999999999999999764 35777665544

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.06  E-value=5e-11  Score=81.21  Aligned_cols=100  Identities=18%  Similarity=0.302  Sum_probs=70.8

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|+.++.|        |.|+||.||++...     .+++...............+|+.+++.++|+||+++++++..+
T Consensus         5 ~~~y~~~~~l--------g~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~   76 (301)
T cd07873           5 LETYIKLDKL--------GEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE   76 (301)
T ss_pred             ccceEEeeEe--------ccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecC
Confidence            3467777777        99999999986432     1111111110111112456799999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +..+++|||+.+ +|.+++... ..+++..+..++
T Consensus        77 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~  110 (301)
T cd07873          77 KSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFL  110 (301)
T ss_pred             CeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHH
Confidence            999999999985 999988764 457776665543

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.05  E-value=4.2e-11  Score=92.88  Aligned_cols=85  Identities=15%  Similarity=0.192  Sum_probs=61.0

Q ss_pred             CCCCCCCchhHHHHHHHHHhhcCCCccccHH-----hhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         30 PKLPAGIFTDSFRDFVDRCLKKNPSERADLK-----TLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        30 ~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      ..+|+|+||.||++...     ......+.+     ......|+..++.++||||+++++++...+..|+|||||++|+|
T Consensus       696 ~~ig~G~~g~Vy~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L  770 (968)
T PLN00113        696 NVISRGKKGASYKGKSI-----KNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNL  770 (968)
T ss_pred             cEEccCCCeeEEEEEEC-----CCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcH
Confidence            45799999999986431     111111111     01123468889999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHhhh
Q psy14717        105 DLILKKAGKIPEHILGTI  122 (125)
Q Consensus       105 ~~~l~~~~~l~~~~~~~~  122 (125)
                      .++++.   +++.....+
T Consensus       771 ~~~l~~---l~~~~~~~i  785 (968)
T PLN00113        771 SEVLRN---LSWERRRKI  785 (968)
T ss_pred             HHHHhc---CCHHHHHHH
Confidence            999964   555544443

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.05  E-value=1.4e-10  Score=78.87  Aligned_cols=98  Identities=16%  Similarity=0.298  Sum_probs=71.1

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ...|+.++.+        |.|+||.||++...     .+++...... ......+.+|+.+++.++|||++++++.+...
T Consensus        18 ~~~~~~~~~l--------g~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~   88 (293)
T cd06647          18 KKKYTRFEKI--------GQGASGTVYTAIDVATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVG   88 (293)
T ss_pred             hhhceeeeEe--------cCCCCeEEEEEEEcCCCCEEEEEEecccc-chHHHHHHHHHHHHhhcCCCCeeehhheeeeC
Confidence            3567777777        99999999986321     1111111111 11122466799999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      +..|+++||+++|+|.+++.+. .+++..+..+
T Consensus        89 ~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i  120 (293)
T cd06647          89 DELWVVMEYLAGGSLTDVVTET-CMDEGQIAAV  120 (293)
T ss_pred             CcEEEEEecCCCCcHHHHHhhc-CCCHHHHHHH
Confidence            9999999999999999999874 5676665443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.05  E-value=1.2e-10  Score=77.25  Aligned_cols=91  Identities=22%  Similarity=0.368  Sum_probs=65.9

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      +|.|.||.+|++...     .+++...... .......+.+|+.+++.++|+|++++++.+...+..+++|||+++++|.
T Consensus         8 l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   87 (256)
T cd08529           8 IGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLH   87 (256)
T ss_pred             ecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHH
Confidence            399999999985331     0111111111 1122335678999999999999999999999999999999999999999


Q ss_pred             HHHHHc--CCCCHHHHhhh
Q psy14717        106 LILKKA--GKIPEHILGTI  122 (125)
Q Consensus       106 ~~l~~~--~~l~~~~~~~~  122 (125)
                      +++...  ..+++..+..+
T Consensus        88 ~~l~~~~~~~~~~~~~~~i  106 (256)
T cd08529          88 KLLKMQRGRPLPEDQVWRF  106 (256)
T ss_pred             HHHHHhcCCCCCHHHHHHH
Confidence            999874  45777655544

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.05  E-value=1.1e-10  Score=78.84  Aligned_cols=93  Identities=35%  Similarity=0.618  Sum_probs=65.1

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeE
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDI   92 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~   92 (125)
                      |+.++.+        |.|+||.||++...     .+++.............+.+|+.++..+.|+|++++++.+...+..
T Consensus         3 ~~~~~~l--------g~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   74 (279)
T cd06619           3 IQYQEIL--------GHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRI   74 (279)
T ss_pred             chheeee--------ccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEE
Confidence            4555666        99999999986432     1111111111111223466899999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         93 SICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        93 ~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      +++|||+++|+|..+    ..+++..+..+
T Consensus        75 ~lv~e~~~~~~l~~~----~~~~~~~~~~~  100 (279)
T cd06619          75 SICTEFMDGGSLDVY----RKIPEHVLGRI  100 (279)
T ss_pred             EEEEecCCCCChHHh----hcCCHHHHHHH
Confidence            999999999998654    24566555443

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.05  E-value=1.4e-10  Score=78.60  Aligned_cols=92  Identities=17%  Similarity=0.182  Sum_probs=65.8

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCcccc--HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERAD--LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~~--~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      ||.|+||.||++.+..     +++........  .....+.+|+.+++.++|+|++.+.+.+...+.++++|||+++|+|
T Consensus         8 lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   87 (285)
T cd05632           8 LGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDL   87 (285)
T ss_pred             EecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccH
Confidence            3999999999754321     11111111111  1112356799999999999999999999999999999999999999


Q ss_pred             HHHHHHc--CCCCHHHHhhhh
Q psy14717        105 DLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~--~~l~~~~~~~~~  123 (125)
                      .+++...  ..+++..+..++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~  108 (285)
T cd05632          88 KFHIYNMGNPGFEEERALFYA  108 (285)
T ss_pred             HHHHHHhcCCCCCHHHHHHHH
Confidence            9988764  357887766554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.04  E-value=1.6e-10  Score=76.51  Aligned_cols=92  Identities=20%  Similarity=0.337  Sum_probs=67.2

Q ss_pred             CCCCCchhHHHHHHHH---------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         32 LPAGIFTDSFRDFVDR---------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      +|.|+||.||.+....         +++.............+.+|+.++..++|+|++++++.+...+..+++|||+++|
T Consensus         7 lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~   86 (258)
T smart00219        7 LGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGG   86 (258)
T ss_pred             eccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCC
Confidence            4999999999754421         1111111111112335678999999999999999999999999999999999999


Q ss_pred             CHHHHHHHcCC--CCHHHHhhhh
Q psy14717        103 SLDLILKKAGK--IPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~--l~~~~~~~~~  123 (125)
                      +|.+++.....  +++..+..++
T Consensus        87 ~l~~~~~~~~~~~~~~~~~~~~~  109 (258)
T smart00219       87 DLLDYLRKNRPKELSLSDLLSFA  109 (258)
T ss_pred             CHHHHHHhhhhccCCHHHHHHHH
Confidence            99999987533  7877766543

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.04  E-value=2.2e-10  Score=76.14  Aligned_cols=95  Identities=19%  Similarity=0.249  Sum_probs=67.5

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH---HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR---CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDI   92 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~---~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~   92 (125)
                      ..|++.+.+        |.|+||.||++....   +++....   ......+.+|+.+++.++|+|++++++.+..+ ..
T Consensus         6 ~~~~~~~~l--------g~g~~g~v~~~~~~~~~~~iK~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~   73 (254)
T cd05083           6 QKLTLGEII--------GEGEFGAVLQGEYTGQKVAVKNIKC---DVTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GL   73 (254)
T ss_pred             HHceeeeee--------ccCCCCceEecccCCCceEEEeecC---cchHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-Cc
Confidence            456666667        999999999864321   1111111   11223566899999999999999999988654 47


Q ss_pred             EEEEEecCCCCHHHHHHHcC--CCCHHHHhhh
Q psy14717         93 SICMEYMDGGSLDLILKKAG--KIPEHILGTI  122 (125)
Q Consensus        93 ~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~  122 (125)
                      +++|||+++|+|.+++....  .+++..+..+
T Consensus        74 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  105 (254)
T cd05083          74 YIVMELMSKGNLVNFLRTRGRALVSVIQLLQF  105 (254)
T ss_pred             EEEEECCCCCCHHHHHHhcCcCCCCHHHHHHH
Confidence            99999999999999998753  3666655443

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.04  E-value=1.8e-10  Score=76.43  Aligned_cols=92  Identities=22%  Similarity=0.338  Sum_probs=67.4

Q ss_pred             CCCCCCchhHHHHHHH-----HHhhcCCCcc---c-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCC
Q psy14717         31 KLPAGIFTDSFRDFVD-----RCLKKNPSER---A-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDG  101 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~-----~~~~~~~~~~---~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~  101 (125)
                      .+|+|+||.||++...     .+++......   . ......+.+|+.+++.++|+|++++++.+......++++||+++
T Consensus         7 ~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   86 (258)
T cd06632           7 LLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPG   86 (258)
T ss_pred             eeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCC
Confidence            3499999999986432     0111111000   0 01122466899999999999999999999999999999999999


Q ss_pred             CCHHHHHHHcCCCCHHHHhhh
Q psy14717        102 GSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      ++|.+++.+...+++..+..+
T Consensus        87 ~~L~~~~~~~~~~~~~~~~~~  107 (258)
T cd06632          87 GSLAKLLKKYGSFPEPVIRLY  107 (258)
T ss_pred             CcHHHHHHhcCCCCHHHHHHH
Confidence            999999988767887776554

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.04  E-value=3.3e-10  Score=75.46  Aligned_cols=92  Identities=16%  Similarity=0.191  Sum_probs=65.8

Q ss_pred             CCCCCCchhHHHHHHH-------HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         31 KLPAGIFTDSFRDFVD-------RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~-------~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      .+|+|+||.||++.+.       .+++....... ......+.+|+.+++.+.|+|++++++.+. .+..+++|||+++|
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            3599999999986321       11121111111 112235668899999999999999998875 44678999999999


Q ss_pred             CHHHHHHHcCCCCHHHHhhhh
Q psy14717        103 SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|.+++.....+++..+..++
T Consensus        81 ~L~~~l~~~~~~~~~~~~~i~  101 (257)
T cd05116          81 PLNKFLQKNKHVTEKNITELV  101 (257)
T ss_pred             cHHHHHHhcCCCCHHHHHHHH
Confidence            999999887778887776654

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.04  E-value=9.4e-11  Score=77.87  Aligned_cols=97  Identities=19%  Similarity=0.283  Sum_probs=71.0

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeE
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDI   92 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~   92 (125)
                      .|++.+.+        |.|+||.||++...    .+++.....  ......+.+|+++++.+.|+|++++++.+......
T Consensus         5 ~~~~~~~i--------g~g~~g~v~~~~~~~~~~~~~k~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   74 (256)
T cd05112           5 ELTLVQEI--------GSGQFGLVWLGYWLEKRKVAIKTIREG--AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPI   74 (256)
T ss_pred             HeEEEeee--------cCcccceEEEEEEeCCCeEEEEECCCC--CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCce
Confidence            55666677        99999999985331    111111111  11122466899999999999999999999998899


Q ss_pred             EEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         93 SICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        93 ~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +++|||+.+|+|.+++... +.++++.+..++
T Consensus        75 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  106 (256)
T cd05112          75 CLVFEFMEHGCLSDYLRAQRGKFSQETLLGMC  106 (256)
T ss_pred             EEEEEcCCCCcHHHHHHhCccCCCHHHHHHHH
Confidence            9999999999999999864 457777665543

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.04  E-value=2.7e-10  Score=76.30  Aligned_cols=91  Identities=19%  Similarity=0.213  Sum_probs=66.0

Q ss_pred             CCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         30 PKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        30 ~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      ..+|+|+||.||++....     +++..... .......+.+|+.+++.++|+|++++++.+..++..++++||+++++|
T Consensus        14 ~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   92 (268)
T cd06624          14 VVLGKGTYGIVYAARDLSTQVRIAIKEIPER-DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSL   92 (268)
T ss_pred             EEEecCCceEEEEeEecCCCcEEEEEEecCC-CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCH
Confidence            345999999999875321     11111111 111223567899999999999999999999999999999999999999


Q ss_pred             HHHHHHc-CCC--CHHHHhh
Q psy14717        105 DLILKKA-GKI--PEHILGT  121 (125)
Q Consensus       105 ~~~l~~~-~~l--~~~~~~~  121 (125)
                      .+++... ..+  ++..+..
T Consensus        93 ~~~l~~~~~~~~~~~~~~~~  112 (268)
T cd06624          93 SALLRSKWGPLKDNEQTIIF  112 (268)
T ss_pred             HHHHHHhcccCCCcHHHHHH
Confidence            9999864 445  5555443

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.03  E-value=8.8e-11  Score=79.51  Aligned_cols=91  Identities=19%  Similarity=0.223  Sum_probs=65.8

Q ss_pred             CCCCchhHHHHHHH--------HHhhcCCCcc---ccHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecC
Q psy14717         33 PAGIFTDSFRDFVD--------RCLKKNPSER---ADLKTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMD  100 (125)
Q Consensus        33 g~g~fg~v~~~~~~--------~~~~~~~~~~---~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~  100 (125)
                      |.|+||.||.+...        .+++......   .........+|+.++..+ +|+||+.+++.+..+...++++||++
T Consensus         9 g~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~   88 (290)
T cd05613           9 GTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYIN   88 (290)
T ss_pred             ccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCC
Confidence            99999999974321        0111111100   001112456789999988 69999999999999999999999999


Q ss_pred             CCCHHHHHHHcCCCCHHHHhhhh
Q psy14717        101 GGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       101 ~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|+|.+++.....+++..+..++
T Consensus        89 ~~~L~~~l~~~~~l~~~~~~~~~  111 (290)
T cd05613          89 GGELFTHLSQRERFKEQEVQIYS  111 (290)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHH
Confidence            99999999887778887766543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG1989|consensus

Probab=99.03  E-value=1.7e-10  Score=86.13  Aligned_cols=90  Identities=20%  Similarity=0.303  Sum_probs=63.7

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCccccHHhh-hHHHHHHHHHhcC-CCceeeeee-eEEeC---C---eEEEEEEe
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSERADLKTL-SATTILKVLHECN-FAHIVGFYG-AFISD---Q---DISICMEY   98 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~-~~~~e~~~~~~~~-h~~iv~~~~-~~~~~---~---~~~iv~e~   98 (125)
                      -+|+|+.||.+....     ++++....  ....+ .+.+|+.+|+.+. |+|||.|++ +....   +   .+.|+|||
T Consensus        46 AEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEy  123 (738)
T KOG1989|consen   46 AEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEY  123 (738)
T ss_pred             ccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhh
Confidence            689999999754321     12211111  12222 4569999999985 999999999 33321   2   48899999


Q ss_pred             cCCCCHHHHHHHc--CCCCHHHHhhhhc
Q psy14717         99 MDGGSLDLILKKA--GKIPEHILGTITS  124 (125)
Q Consensus        99 ~~~GsL~~~l~~~--~~l~~~~~~~~~~  124 (125)
                      |.||+|-++++.+  .+|+|..+.++++
T Consensus       124 C~gg~Lvd~mn~Rlq~~lte~eVLkIf~  151 (738)
T KOG1989|consen  124 CKGGSLVDFMNTRLQTRLTEDEVLKIFY  151 (738)
T ss_pred             ccCCcHHHHHHHHHhccCChHHHHHHHH
Confidence            9999999999965  5699998887753

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.03  E-value=2.7e-10  Score=76.58  Aligned_cols=98  Identities=17%  Similarity=0.220  Sum_probs=69.7

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .|+.++.+        |+|+||.||++...         .+++.............+.+|+.+++.+.|+|++++++++.
T Consensus         5 ~~~~~~~i--------g~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~   76 (284)
T cd05038           5 HLKFIKQL--------GEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCE   76 (284)
T ss_pred             hchhheee--------ccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeee
Confidence            55666777        99999999986432         11111111111112335678999999999999999999887


Q ss_pred             e--CCeEEEEEEecCCCCHHHHHHHcC-CCCHHHHhhh
Q psy14717         88 S--DQDISICMEYMDGGSLDLILKKAG-KIPEHILGTI  122 (125)
Q Consensus        88 ~--~~~~~iv~e~~~~GsL~~~l~~~~-~l~~~~~~~~  122 (125)
                      .  ....+++|||+++|+|.+++.... .+++..+..+
T Consensus        77 ~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~  114 (284)
T cd05038          77 KPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLF  114 (284)
T ss_pred             cCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHH
Confidence            7  557999999999999999998753 4776665544

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.03  E-value=2.7e-10  Score=76.13  Aligned_cols=104  Identities=24%  Similarity=0.416  Sum_probs=73.3

Q ss_pred             CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCcc---ccHHhhhHHHHHHHHHhc-CCCceeeeeeeEE
Q psy14717         12 PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSER---ADLKTLSATTILKVLHEC-NFAHIVGFYGAFI   87 (125)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~---~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~   87 (125)
                      |++.+.|++.+.+        |.|.||.+|.+...........+.   .......+.+|+.+++.+ .|+|++++++.+.
T Consensus         2 ~~~~~~y~~~~~l--------~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~   73 (275)
T cd06608           2 PDPTGIFELVEVI--------GEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFI   73 (275)
T ss_pred             CCchhheeheeee--------cCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEE
Confidence            4566789999998        999999999854321100000010   111223567899999987 7999999999997


Q ss_pred             eCC------eEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhhh
Q psy14717         88 SDQ------DISICMEYMDGGSLDLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~------~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~~  123 (125)
                      ...      .+|++|||+++++|.+++...    ..+++..+..++
T Consensus        74 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~  119 (275)
T cd06608          74 KKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYIL  119 (275)
T ss_pred             ecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHH
Confidence            654      489999999999999998753    467777665543

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.03  E-value=4.6e-10  Score=75.69  Aligned_cols=88  Identities=11%  Similarity=0.163  Sum_probs=66.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .+.|++++.+        |.|+||.||++...          .+++.............+.+|+.++..++|+||+++++
T Consensus         4 ~~~~~~~~~l--------g~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~   75 (283)
T cd05091           4 LSTVRFMEEL--------GEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLG   75 (283)
T ss_pred             HHHHHHHHHh--------CCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEE
Confidence            4578999999        99999999986431          11222221111111224667888999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHH
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKK  110 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~  110 (125)
                      .+...+.+++++||+.+++|.+++..
T Consensus        76 ~~~~~~~~~~~~e~~~~~~l~~~l~~  101 (283)
T cd05091          76 VVTKEQPLSMIFSYCSHSDLHEFLVM  101 (283)
T ss_pred             EEcCCCceEEEEEcCCCCcHHHHHHh
Confidence            99999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0594|consensus

Probab=99.03  E-value=9.7e-10  Score=75.16  Aligned_cols=98  Identities=16%  Similarity=0.299  Sum_probs=72.7

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhh--hHHHHHHHHHhcCCCc-eeeeeeeE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTL--SATTILKVLHECNFAH-IVGFYGAF   86 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~--~~~~e~~~~~~~~h~~-iv~~~~~~   86 (125)
                      +..|+.++++        |.|+||.||++...     .++++....... +..  ...+|+.+++.++|+| |+.+++++
T Consensus        10 ~~~~~~~ekl--------GeGtyg~Vykar~~~~g~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~   80 (323)
T KOG0594|consen   10 MFDYEKVEKL--------GEGTYGVVYKARSKRTGKFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVI   80 (323)
T ss_pred             HHHHHHHHHh--------CCCCceEEEEEEEecCCCEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeee
Confidence            7789999999        99999999985432     122222111110 000  2458999999999999 99999999


Q ss_pred             EeCC------eEEEEEEecCCCCHHHHHHHcC----CCCHHHHhhh
Q psy14717         87 ISDQ------DISICMEYMDGGSLDLILKKAG----KIPEHILGTI  122 (125)
Q Consensus        87 ~~~~------~~~iv~e~~~~GsL~~~l~~~~----~l~~~~~~~~  122 (125)
                      .+.+      .+++++||+.. +|.+++....    .++...++.+
T Consensus        81 ~~~~~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~  125 (323)
T KOG0594|consen   81 HTSNNHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSF  125 (323)
T ss_pred             eecccccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHH
Confidence            9887      89999999999 9999999864    4666555544

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.03  E-value=1.1e-10  Score=80.51  Aligned_cols=90  Identities=14%  Similarity=0.143  Sum_probs=63.9

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCc-cccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC-----eEEEEEEecCC
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSE-RADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ-----DISICMEYMDG  101 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~-----~~~iv~e~~~~  101 (125)
                      |+|+||.||++...     .+++..... ........+.+|+.+++.++||||+++++++...+     .+|++||||. 
T Consensus         9 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-   87 (338)
T cd07859           9 GKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-   87 (338)
T ss_pred             eecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-
Confidence            99999999986432     111211111 01112224678999999999999999999886543     4899999996 


Q ss_pred             CCHHHHHHHcCCCCHHHHhhhh
Q psy14717        102 GSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++|.+++.....+++..+..++
T Consensus        88 ~~L~~~l~~~~~~~~~~~~~i~  109 (338)
T cd07859          88 SDLHQVIKANDDLTPEHHQFFL  109 (338)
T ss_pred             CCHHHHHHhcccCCHHHHHHHH
Confidence            5999999887788888776554

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.02  E-value=9.5e-11  Score=79.35  Aligned_cols=91  Identities=33%  Similarity=0.504  Sum_probs=62.6

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC--CeEEEEEEecCCCCHH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD--QDISICMEYMDGGSLD  105 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~--~~~~iv~e~~~~GsL~  105 (125)
                      |.|++|.||.+....     +++.............+.+|+++++.++|+||+++++.+...  +.++++|||+++|+|.
T Consensus        10 g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~   89 (287)
T cd06621          10 GEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLD   89 (287)
T ss_pred             ccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHH
Confidence            999999999865421     111111111111223567899999999999999999988653  4699999999999999


Q ss_pred             HHHHHc----CCCCHHHHhhhh
Q psy14717        106 LILKKA----GKIPEHILGTIT  123 (125)
Q Consensus       106 ~~l~~~----~~l~~~~~~~~~  123 (125)
                      +++...    ..+++..+..++
T Consensus        90 ~~l~~~~~~~~~l~~~~~~~i~  111 (287)
T cd06621          90 SIYKKVKKRGGRIGEKVLGKIA  111 (287)
T ss_pred             HHHHHHHhcCCCCCHHHHHHHH
Confidence            987642    346666555443

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.02  E-value=2.1e-10  Score=76.19  Aligned_cols=91  Identities=18%  Similarity=0.254  Sum_probs=65.0

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |.|+||.+|.+....     +++...... .......+.+|+.+++.++|+|++++.+.+...+..++++||+++|+|.+
T Consensus         9 g~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~   88 (256)
T cd08218           9 GEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYK   88 (256)
T ss_pred             ccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHH
Confidence            999999988643210     111111111 11122356789999999999999999999999999999999999999999


Q ss_pred             HHHHcC--CCCHHHHhhhh
Q psy14717        107 ILKKAG--KIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~~~--~l~~~~~~~~~  123 (125)
                      ++....  .+++..+..++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~  107 (256)
T cd08218          89 KINAQRGVLFPEDQILDWF  107 (256)
T ss_pred             HHHhccCCCCCHHHHHHHH
Confidence            997642  46777665543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.02  E-value=1.2e-09  Score=73.85  Aligned_cols=100  Identities=21%  Similarity=0.436  Sum_probs=73.9

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ....|+....+        |.|.||.||++....     +++.....  ......+.+|+.+++.++|+|++++++.+..
T Consensus        17 ~~~~~~~~~~l--------~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   86 (286)
T cd06614          17 PRELYKNLEKI--------GEGASGEVYKATDRATGKEVAIKKMRLR--KQNKELIINEILIMKDCKHPNIVDYYDSYLV   86 (286)
T ss_pred             ccccchHhHhc--------cCCCCeEEEEEEEccCCcEEEEEEEecC--chhHHHHHHHHHHHHHCCCCCeeEEEEEEEE
Confidence            34467777777        999999999854421     11111110  0112346689999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcC-CCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAG-KIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~-~l~~~~~~~~~  123 (125)
                      .+..|+++||+++++|.+++..+. .+++..+..++
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~  122 (286)
T cd06614          87 GDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVC  122 (286)
T ss_pred             CCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHH
Confidence            999999999999999999999865 67777665443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.02  E-value=2.1e-10  Score=76.47  Aligned_cols=97  Identities=21%  Similarity=0.321  Sum_probs=68.9

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.+.|++++++        |.|+||.||++....    +++.....  ......+.+|+.+++.++|+|++++++.+. .
T Consensus         4 ~~~~~~~~~~i--------g~G~~g~v~~~~~~~~~~~a~K~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~   72 (260)
T cd05067           4 PRETLKLVKKL--------GAGQFGEVWMGYYNGHTKVAIKSLKQG--SMSPEAFLAEANLMKQLQHPRLVRLYAVVT-Q   72 (260)
T ss_pred             chHHceeeeee--------ccCccceEEeeecCCCceEEEEEecCC--CCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-c
Confidence            34577777888        999999999865421    11111111  111225678999999999999999998764 4


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA--GKIPEHILGT  121 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~  121 (125)
                      ...+++|||+.+|+|.+++...  ..+++..+..
T Consensus        73 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~  106 (260)
T cd05067          73 EPIYIITEYMENGSLVDFLKTPEGIKLTINKLID  106 (260)
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHH
Confidence            5689999999999999998764  3466655543

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG4645|consensus

Probab=99.02  E-value=3.9e-11  Score=93.09  Aligned_cols=93  Identities=23%  Similarity=0.326  Sum_probs=68.1

Q ss_pred             CCCCCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEec
Q psy14717         28 PPPKLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYM   99 (125)
Q Consensus        28 ~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~   99 (125)
                      ...++|.|.||.||.+...        +..+..+....  ......+|..++..++|||+|+++|+-...+.++|.||||
T Consensus      1239 rg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k--~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC 1316 (1509)
T KOG4645|consen 1239 RGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHK--TFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYC 1316 (1509)
T ss_pred             cccccCCcceeeeEEeecCCccchhhhhhhhcCccccc--cCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHh
Confidence            3466799999999975431        11111111111  1114568999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHcCCCCHHHHhhh
Q psy14717        100 DGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus       100 ~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      .+|+|.+++...+..+|-..+.+
T Consensus      1317 ~~GsLa~ll~~gri~dE~vt~vy 1339 (1509)
T KOG4645|consen 1317 EGGSLASLLEHGRIEDEMVTRVY 1339 (1509)
T ss_pred             ccCcHHHHHHhcchhhhhHHHHH
Confidence            99999999988666666555443

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.01  E-value=2.9e-10  Score=75.77  Aligned_cols=99  Identities=19%  Similarity=0.253  Sum_probs=70.8

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.+.|++++.+        |.|+||.||++...    .+.+.......  ....+.+|+.+++.++|+|++++++.+. .
T Consensus         4 ~~~~~~~~~~i--------g~g~~~~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~   72 (260)
T cd05070           4 PRESLQLIKKL--------GNGQFGEVWMGTWNGNTKVAVKTLKPGTM--SPESFLEEAQIMKKLRHDKLVQLYAVVS-E   72 (260)
T ss_pred             chHHhhhhhee--------ccccCceEEEEEecCCceeEEEEecCCCC--CHHHHHHHHHHHHhcCCCceEEEEeEEC-C
Confidence            45678888888        99999999975321    11121111111  1224678999999999999999998774 4


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      ...+++|||+++|+|.+++...  ..++++.+..++
T Consensus        73 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~  108 (260)
T cd05070          73 EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMA  108 (260)
T ss_pred             CCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHH
Confidence            5689999999999999999764  347776655543

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.01  E-value=1.4e-10  Score=77.76  Aligned_cols=98  Identities=17%  Similarity=0.131  Sum_probs=68.1

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      .|.+.+.+        |.|+||.||++...        .+++.............+.+|+.+++.+.|+|++++++++..
T Consensus         7 ~~~~~~~l--------g~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~   78 (270)
T cd05056           7 DITLGRCI--------GEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE   78 (270)
T ss_pred             hceeeeee--------CCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC
Confidence            45555566        99999999976421        111111111111222356789999999999999999998865


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                       +..|++|||+++|+|.+++... ..+++..+..++
T Consensus        79 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  113 (270)
T cd05056          79 -NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYS  113 (270)
T ss_pred             -CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence             4578999999999999999875 347776665543

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.00  E-value=4.1e-10  Score=76.68  Aligned_cols=97  Identities=15%  Similarity=0.287  Sum_probs=70.5

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD   91 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~   91 (125)
                      .|+....+        |.|+||.||++...     .++++... ........+.+|+.+++.++|+|++++++.+...+.
T Consensus        21 ~~~~~~~l--------g~g~~g~v~~~~~~~~~~~v~iK~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   91 (292)
T cd06657          21 YLDNFIKI--------GEGSTGIVCIATVKSSGKLVAVKKMDL-RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDE   91 (292)
T ss_pred             HhhhHHHc--------CCCCCeEEEEEEEcCCCeEEEEEEecc-cchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCE
Confidence            45555667        99999999975331     11111111 111223356789999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+++|||+++++|.+++.. +.+++..+..++
T Consensus        92 ~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~  122 (292)
T cd06657          92 LWVVMEFLEGGALTDIVTH-TRMNEEQIAAVC  122 (292)
T ss_pred             EEEEEecCCCCcHHHHHhc-CCCCHHHHHHHH
Confidence            9999999999999998865 467776665543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.00  E-value=5.7e-10  Score=73.93  Aligned_cols=92  Identities=24%  Similarity=0.326  Sum_probs=66.5

Q ss_pred             CCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         31 KLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      .+|.|+||.||++...    .+++.............+.+|+.+++.+.|+|++.+++.+......+++|||+.+++|.+
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~   81 (251)
T cd05041           2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT   81 (251)
T ss_pred             ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence            3599999999975432    122221211111123356789999999999999999999999999999999999999999


Q ss_pred             HHHHc-CCCCHHHHhhh
Q psy14717        107 ILKKA-GKIPEHILGTI  122 (125)
Q Consensus       107 ~l~~~-~~l~~~~~~~~  122 (125)
                      ++... ..+++..+..+
T Consensus        82 ~l~~~~~~~~~~~~~~~   98 (251)
T cd05041          82 FLRKKKNRLTVKKLLQM   98 (251)
T ss_pred             HHHhcCCCCCHHHHHHH
Confidence            99764 45666554443

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.00  E-value=9e-11  Score=79.13  Aligned_cols=98  Identities=15%  Similarity=0.223  Sum_probs=69.8

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD   91 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~   91 (125)
                      |+.++.+        |.|.||.||++....     +++...... .......+.+|+.+++.++|+|++++++++..+..
T Consensus         3 y~~~~~l--------g~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   74 (286)
T cd07846           3 YENLGLV--------GEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKR   74 (286)
T ss_pred             eeEeeee--------ccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCe
Confidence            4555666        999999999854320     111111100 01112245679999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .++++||+++++|..+......+++..+..++
T Consensus        75 ~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~  106 (286)
T cd07846          75 LYLVFEFVDHTVLDDLEKYPNGLDESRVRKYL  106 (286)
T ss_pred             EEEEEecCCccHHHHHHhccCCCCHHHHHHHH
Confidence            99999999999999888766668877766554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.00  E-value=1.1e-10  Score=77.60  Aligned_cols=92  Identities=18%  Similarity=0.306  Sum_probs=67.2

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCcccc--HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERAD--LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~~--~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      +|.|+||.||.+....     +++........  .....+.+|+.+++.+.|+|++++++.+......|+++||+++|+|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            4889999999754321     11111111110  1122466788999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHhhhh
Q psy14717        105 DLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+++.+.+.+++..+..++
T Consensus        81 ~~~l~~~~~~~~~~~~~i~   99 (265)
T cd05579          81 ASLLENVGSLDEDVARIYI   99 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHH
Confidence            9999987778887766554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.00  E-value=2.3e-10  Score=76.46  Aligned_cols=96  Identities=14%  Similarity=0.197  Sum_probs=69.0

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD   91 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~   91 (125)
                      .|+..+.+        |.|+||.||++...     .+++....  .......+.+|+.+++.+.|+|++++++.+...+.
T Consensus         7 ~~~~~~~i--------g~g~~~~v~~~~~~~~~~~~~~K~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   76 (263)
T cd05052           7 DITMKHKL--------GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPP   76 (263)
T ss_pred             HeEEeeec--------CCcccceEEEEEEecCCceEEEEEecC--CchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCC
Confidence            45555566        99999999985432     11111111  11122346689999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHc--CCCCHHHHhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKA--GKIPEHILGTI  122 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~  122 (125)
                      ++++|||+++|+|.+++...  ..+++..+..+
T Consensus        77 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~  109 (263)
T cd05052          77 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM  109 (263)
T ss_pred             cEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHH
Confidence            99999999999999999764  24676655443

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0660|consensus

Probab=99.00  E-value=2.8e-10  Score=78.13  Aligned_cols=91  Identities=16%  Similarity=0.205  Sum_probs=67.9

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCC-ccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe-----CCeEEEEEEecCC
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPS-ERADLKTLSATTILKVLHECNFAHIVGFYGAFIS-----DQDISICMEYMDG  101 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~-----~~~~~iv~e~~~~  101 (125)
                      |.|.||.|.++...     .|.++... -.......+..||+++++.++|+||+.+.+++..     -+.+|+|+|+|..
T Consensus        31 G~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMet  110 (359)
T KOG0660|consen   31 GRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELMET  110 (359)
T ss_pred             cCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHhh
Confidence            99999999875432     12222221 1111223356799999999999999999999877     2459999999988


Q ss_pred             CCHHHHHHHcCCCCHHHHhhhhc
Q psy14717        102 GSLDLILKKAGKIPEHILGTITS  124 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~~~~~  124 (125)
                       +|...|+....+++..++++.+
T Consensus       111 -DL~~iik~~~~L~d~H~q~f~Y  132 (359)
T KOG0660|consen  111 -DLHQIIKSQQDLTDDHAQYFLY  132 (359)
T ss_pred             -HHHHHHHcCccccHHHHHHHHH
Confidence             9999999976699988877654

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.00  E-value=5.3e-10  Score=74.83  Aligned_cols=90  Identities=22%  Similarity=0.369  Sum_probs=64.5

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCc---ccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEe--CCeEEEEEEecCC
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSE---RAD-LKTLSATTILKVLHECNFAHIVGFYGAFIS--DQDISICMEYMDG  101 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~---~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~--~~~~~iv~e~~~~  101 (125)
                      |.|+||.||++....     +++.....   ... .....+.+|+.+++.++|+|++++++.+..  ...+++++||+++
T Consensus        11 g~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~   90 (266)
T cd06651          11 GQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPG   90 (266)
T ss_pred             cCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCC
Confidence            999999999864321     11111110   011 112246689999999999999999998876  3578999999999


Q ss_pred             CCHHHHHHHcCCCCHHHHhhh
Q psy14717        102 GSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      ++|.+++...+.+++..+..+
T Consensus        91 ~~L~~~l~~~~~l~~~~~~~~  111 (266)
T cd06651          91 GSVKDQLKAYGALTESVTRKY  111 (266)
T ss_pred             CcHHHHHHHcCCCCHHHHHHH
Confidence            999999988777887766544

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.00  E-value=9.5e-11  Score=79.33  Aligned_cols=99  Identities=17%  Similarity=0.310  Sum_probs=69.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      +.|+....+        |.|+||.||++....     +++...............+|+.+++.++|+|++++++++...+
T Consensus         5 ~~y~~~~~l--------g~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   76 (291)
T cd07844           5 ETYKKLDKL--------GEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKK   76 (291)
T ss_pred             cceeEEEEE--------eecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCC
Confidence            356666667        999999999864321     1111111100111123457999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ..+++|||+.+ +|.+++.+. ..+++..++.++
T Consensus        77 ~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~  109 (291)
T cd07844          77 TLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFL  109 (291)
T ss_pred             eEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHH
Confidence            99999999996 999988764 456776665543

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.00  E-value=1.2e-10  Score=77.51  Aligned_cols=90  Identities=22%  Similarity=0.387  Sum_probs=67.0

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |.|+||.+|++...     .+++........ .....+.+|+.+++.++|+||+++++.+...+..++++||+++++|.+
T Consensus         9 g~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   88 (264)
T cd06626           9 GGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEE   88 (264)
T ss_pred             ecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHH
Confidence            99999999986431     111111111111 122356789999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCHHHHhhh
Q psy14717        107 ILKKAGKIPEHILGTI  122 (125)
Q Consensus       107 ~l~~~~~l~~~~~~~~  122 (125)
                      ++.....+++..+..+
T Consensus        89 ~~~~~~~~~~~~~~~i  104 (264)
T cd06626          89 LLEHGRILDEHVIRVY  104 (264)
T ss_pred             HHhhcCCCChHHHHHH
Confidence            9988766777666554

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG1025|consensus

Probab=99.00  E-value=2.2e-11  Score=91.25  Aligned_cols=96  Identities=10%  Similarity=0.088  Sum_probs=71.2

Q ss_pred             CCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEe
Q psy14717         28 PPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEY   98 (125)
Q Consensus        28 ~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~   98 (125)
                      ....||+|.||.||++.+.         .+.+.........+..+++.|+-.|.++.|||++++++++..+. +.||++|
T Consensus       700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~  778 (1177)
T KOG1025|consen  700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQL  778 (1177)
T ss_pred             hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHh
Confidence            3455699999999998762         11111111111223446788999999999999999999998776 8999999


Q ss_pred             cCCCCHHHHHHHc-CCCCHHHHhhhhc
Q psy14717         99 MDGGSLDLILKKA-GKIPEHILGTITS  124 (125)
Q Consensus        99 ~~~GsL~~~l~~~-~~l~~~~~~~~~~  124 (125)
                      |+.|+|.++++.+ .++-.+.+..|++
T Consensus       779 mP~G~LlDyvr~hr~~igsq~lLnw~~  805 (1177)
T KOG1025|consen  779 MPLGCLLDYVREHRDNIGSQDLLNWCY  805 (1177)
T ss_pred             cccchHHHHHHHhhccccHHHHHHHHH
Confidence            9999999999987 4676766666654

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.00  E-value=2.2e-10  Score=76.07  Aligned_cols=91  Identities=23%  Similarity=0.350  Sum_probs=64.3

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe--CCeEEEEEEecCCCCH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFIS--DQDISICMEYMDGGSL  104 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~--~~~~~iv~e~~~~GsL  104 (125)
                      |.|+||.||++....     +++...... .......+.+|+.+++.++|+|++++++.+..  ...++++|||+++|+|
T Consensus         9 g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L   88 (265)
T cd08217           9 GKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDL   88 (265)
T ss_pred             ccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCH
Confidence            999999999865421     111111111 11223356689999999999999999998764  4568999999999999


Q ss_pred             HHHHHHc----CCCCHHHHhhhh
Q psy14717        105 DLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~----~~l~~~~~~~~~  123 (125)
                      .+++...    ..+++..+..++
T Consensus        89 ~~~l~~~~~~~~~l~~~~~~~~~  111 (265)
T cd08217          89 AQLIQKCKKERKYIEEEFIWRIL  111 (265)
T ss_pred             HHHHHHHhhcccCCCHHHHHHHH
Confidence            9999763    467776665543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.99  E-value=2.4e-10  Score=75.77  Aligned_cols=91  Identities=24%  Similarity=0.349  Sum_probs=66.1

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |.|.||.+|++....     +++...... .......+.+|+.+++.++|+|++++++.+...+..+++|||+++|+|.+
T Consensus         9 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   88 (256)
T cd08220           9 GRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAE   88 (256)
T ss_pred             cccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHH
Confidence            999999999744321     111111111 11122356789999999999999999999999999999999999999999


Q ss_pred             HHHHc--CCCCHHHHhhhh
Q psy14717        107 ILKKA--GKIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~~--~~l~~~~~~~~~  123 (125)
                      ++...  ..+++..+..++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~  107 (256)
T cd08220          89 YIQKRCNSLLDEDTILHFF  107 (256)
T ss_pred             HHHHhcccCCCHHHHHHHH
Confidence            99874  347777665543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.99  E-value=1.3e-10  Score=79.60  Aligned_cols=90  Identities=18%  Similarity=0.226  Sum_probs=66.0

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCcccc--HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSERAD--LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~~~--~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      |.|+||.||.+....     +++........  .....+..|+++++.+.|+|++++++.+......|++|||+.+|+|.
T Consensus        10 g~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   89 (316)
T cd05574          10 GKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELF   89 (316)
T ss_pred             cCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHH
Confidence            999999999754321     11211111111  12224667999999999999999999999999999999999999999


Q ss_pred             HHHHHc--CCCCHHHHhhh
Q psy14717        106 LILKKA--GKIPEHILGTI  122 (125)
Q Consensus       106 ~~l~~~--~~l~~~~~~~~  122 (125)
                      +++.+.  ..+++..+..+
T Consensus        90 ~~~~~~~~~~l~~~~~~~~  108 (316)
T cd05574          90 RLLQRQPGKCLSEEVARFY  108 (316)
T ss_pred             HHHHhCCCCccCHHHHHHH
Confidence            999864  45777766554

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.99  E-value=2.2e-10  Score=76.40  Aligned_cols=95  Identities=20%  Similarity=0.201  Sum_probs=67.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      ++.|++.+.+        |+|+||.||++...    .+++....  .......+.+|+.+++.++|+|++++++.+.. .
T Consensus         5 ~~~~~~~~~l--------g~g~~~~vy~~~~~~~~~~~iK~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~   73 (260)
T cd05073           5 RESLKLEKKL--------GAGQFGEVWMATYNKHTKVAVKTMKP--GSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E   73 (260)
T ss_pred             ccceeEEeEe--------cCccceEEEEEEecCCccEEEEecCC--ChhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C
Confidence            4466666777        99999999976431    11111111  11122346679999999999999999999877 6


Q ss_pred             eEEEEEEecCCCCHHHHHHHc--CCCCHHHHh
Q psy14717         91 DISICMEYMDGGSLDLILKKA--GKIPEHILG  120 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~  120 (125)
                      ..+++|||+++|+|.+++...  ..++...+.
T Consensus        74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~  105 (260)
T cd05073          74 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI  105 (260)
T ss_pred             CeEEEEEeCCCCcHHHHHHhCCccccCHHHHH
Confidence            789999999999999999874  235554443

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG0193|consensus

Probab=98.99  E-value=2.2e-10  Score=83.25  Aligned_cols=81  Identities=19%  Similarity=0.244  Sum_probs=65.1

Q ss_pred             CCCCCCCchhHHHHHHH--HHhhcCCCccccHHh-hhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         30 PKLPAGIFTDSFRDFVD--RCLKKNPSERADLKT-LSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        30 ~~lg~g~fg~v~~~~~~--~~~~~~~~~~~~~~~-~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      +++|+|+||+||++.+.  .++++-.....+..+ ..+..|+.++++-.|.||+=+.|++..++. .||+-||.|-||+.
T Consensus       398 ~rIGsGsFGtV~Rg~whGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~  476 (678)
T KOG0193|consen  398 ERIGSGSFGTVYRGRWHGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYT  476 (678)
T ss_pred             ceeccccccceeecccccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhh
Confidence            44499999999999885  444443333333333 357799999999999999999999998876 99999999999999


Q ss_pred             HHHHc
Q psy14717        107 ILKKA  111 (125)
Q Consensus       107 ~l~~~  111 (125)
                      +|+..
T Consensus       477 hlHv~  481 (678)
T KOG0193|consen  477 HLHVQ  481 (678)
T ss_pred             hccch
Confidence            99864

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=98.99  E-value=1.9e-10  Score=80.73  Aligned_cols=90  Identities=16%  Similarity=0.134  Sum_probs=65.4

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC-----eEEEEEEecCC
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQ-----DISICMEYMDG  101 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~-----~~~iv~e~~~~  101 (125)
                      |.|+||.||++...     .++++...... ......+.+|+.+++.++|+||+++++++..++     .+|++|||+.+
T Consensus         9 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~   88 (372)
T cd07853           9 GYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQS   88 (372)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeecccc
Confidence            99999999975431     11222111111 112235678999999999999999999998876     79999999985


Q ss_pred             CCHHHHHHHcCCCCHHHHhhhh
Q psy14717        102 GSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                       +|.+.+.....+++..++.++
T Consensus        89 -~l~~~~~~~~~l~~~~~~~~~  109 (372)
T cd07853          89 -DLHKIIVSPQPLSSDHVKVFL  109 (372)
T ss_pred             -CHHHHHhcCCCCCHHHHHHHH
Confidence             899888877778887776554

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=98.99  E-value=2.5e-10  Score=75.96  Aligned_cols=97  Identities=23%  Similarity=0.267  Sum_probs=67.8

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE-eCC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI-SDQ   90 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~-~~~   90 (125)
                      +..|++.+.+        |+|+||.||++...   .+++....   ......+.+|+.+++.+.|+|++++++.+. ..+
T Consensus         5 ~~~~~~~~~l--------g~g~~~~v~~~~~~~~~~~~k~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   73 (256)
T cd05082           5 MKELKLLQTI--------GKGEFGDVMLGDYRGNKVAVKCIKN---DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG   73 (256)
T ss_pred             HHhCeeeeee--------cccCCCeEEEEEEcCCcEEEEEeCC---CchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCC
Confidence            3456666777        99999999975321   01111111   111224668999999999999999998764 456


Q ss_pred             eEEEEEEecCCCCHHHHHHHcC--CCCHHHHhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAG--KIPEHILGTI  122 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~  122 (125)
                      .++++|||+++|+|.++++...  .+++..+..+
T Consensus        74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  107 (256)
T cd05082          74 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKF  107 (256)
T ss_pred             ceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHH
Confidence            7999999999999999998753  3666665544

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=98.99  E-value=2.1e-10  Score=76.69  Aligned_cols=98  Identities=19%  Similarity=0.224  Sum_probs=69.1

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +...|++.+++        |.|+||.||++...    .+++......  .....+.+|+.+++.++|+|++++++.+. .
T Consensus         4 ~~~~~~~~~~l--------g~g~~~~v~~~~~~~~~~valK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~   72 (262)
T cd05071           4 PRESLRLEVKL--------GQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-E   72 (262)
T ss_pred             ChHHeeEeeec--------CCCCCCcEEEEEecCCceEEEEecccCc--cCHHHHHHHHHHHHhCCCCCcceEEEEEC-C
Confidence            34567888888        99999999986431    1111111111  11224678999999999999999998774 4


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA--GKIPEHILGTI  122 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~  122 (125)
                      ...+++|||+++|+|.+++...  ..+++..+..+
T Consensus        73 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  107 (262)
T cd05071          73 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM  107 (262)
T ss_pred             CCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHH
Confidence            5689999999999999999864  34666665544

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.99  E-value=2.8e-10  Score=77.54  Aligned_cols=89  Identities=20%  Similarity=0.325  Sum_probs=65.5

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      +|.|.||.||++...     .+++....... .....+.+|+.+++.++|+|++.+++.+...+.+++++||+++|+|..
T Consensus        27 lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  105 (296)
T cd06655          27 IGQGASGTVFTAIDVATGQEVAIKQINLQKQ-PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTD  105 (296)
T ss_pred             EecCCCeEEEEEEEcCCCcEEEEEEEecccC-chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHH
Confidence            399999999975321     11111111111 122245679999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCHHHHhhh
Q psy14717        107 ILKKAGKIPEHILGTI  122 (125)
Q Consensus       107 ~l~~~~~l~~~~~~~~  122 (125)
                      ++.. ..+++..+..+
T Consensus       106 ~~~~-~~l~~~~~~~i  120 (296)
T cd06655         106 VVTE-TCMDEAQIAAV  120 (296)
T ss_pred             HHHh-cCCCHHHHHHH
Confidence            9977 46777766554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.98  E-value=1.8e-10  Score=88.39  Aligned_cols=87  Identities=18%  Similarity=0.248  Sum_probs=65.3

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc--ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER--ADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ++|++.+.|        |+|+||.||++...     .+++......  ......++.+|+.+++.++|||++++++.+..
T Consensus         2 grYeIi~~L--------GkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d   73 (932)
T PRK13184          2 QRYDIIRLI--------GKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD   73 (932)
T ss_pred             CCeEEEEEE--------ecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee
Confidence            356667777        99999999986432     1222211111  11122356789999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHH
Q psy14717         89 DQDISICMEYMDGGSLDLILKK  110 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~  110 (125)
                      ++..|++|||++||+|.+++.+
T Consensus        74 ~~~lyLVMEY~eGGSL~~lL~s   95 (932)
T PRK13184         74 GDPVYYTMPYIEGYTLKSLLKS   95 (932)
T ss_pred             CCEEEEEEEcCCCCCHHHHHHH
Confidence            9999999999999999999875

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.98  E-value=3e-10  Score=76.56  Aligned_cols=91  Identities=19%  Similarity=0.267  Sum_probs=65.2

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |.|+||.+|++....     +++....... ......+.+|+.+++.+.|+|++++++.+..++..+++|||++++.+..
T Consensus        10 ~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~   89 (288)
T cd07833          10 GEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLEL   89 (288)
T ss_pred             cccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHH
Confidence            999999999854321     1111111100 1112246689999999999999999999999999999999999988877


Q ss_pred             HHHHcCCCCHHHHhhhh
Q psy14717        107 ILKKAGKIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~~~~l~~~~~~~~~  123 (125)
                      ++++...+++..+..++
T Consensus        90 ~~~~~~~~~~~~~~~~~  106 (288)
T cd07833          90 LEASPGGLPPDAVRSYI  106 (288)
T ss_pred             HHhcCCCCCHHHHHHHH
Confidence            77665668877765543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.98  E-value=3.8e-10  Score=76.76  Aligned_cols=98  Identities=14%  Similarity=0.266  Sum_probs=70.5

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      +.+.....|        |.|+||.||++...     .+++..... .......+.+|+.+++.++|+|++++++.+...+
T Consensus        22 ~~~~~~~~l--------g~g~~g~v~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~   92 (292)
T cd06658          22 EYLDSFIKI--------GEGSTGIVCIATEKHTGKQVAVKKMDLR-KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD   92 (292)
T ss_pred             HHHhhhhcc--------cCCCCeEEEEEEECCCCCEEEEEEEecc-hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC
Confidence            455555666        99999999975321     111111111 1112224668999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..+++|||+++++|.+++.. +.+++..+..++
T Consensus        93 ~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~~~  124 (292)
T cd06658          93 ELWVVMEFLEGGALTDIVTH-TRMNEEQIATVC  124 (292)
T ss_pred             eEEEEEeCCCCCcHHHHHhc-CCCCHHHHHHHH
Confidence            99999999999999998866 467877766554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.98  E-value=8.1e-10  Score=75.33  Aligned_cols=89  Identities=13%  Similarity=0.248  Sum_probs=65.4

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI  107 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~  107 (125)
                      |.|+||.||++...     .+++..... .......+.+|+.++..+.|+|++++++.+..++..|+++||+++|+|..+
T Consensus        30 g~g~~g~v~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~  108 (297)
T cd06659          30 GEGSTGIVCIAREKHSGRQVAVKMMDLR-KQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDI  108 (297)
T ss_pred             CCCCceeEEEEEEcCCCCEEEEEEEEec-ccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHH
Confidence            99999999975331     111111111 111222466899999999999999999999999999999999999999998


Q ss_pred             HHHcCCCCHHHHhhhh
Q psy14717        108 LKKAGKIPEHILGTIT  123 (125)
Q Consensus       108 l~~~~~l~~~~~~~~~  123 (125)
                      +.. ..+++..+..++
T Consensus       109 ~~~-~~~~~~~~~~~~  123 (297)
T cd06659         109 VSQ-TRLNEEQIATVC  123 (297)
T ss_pred             Hhh-cCCCHHHHHHHH
Confidence            876 467877766543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.97  E-value=1.1e-09  Score=75.64  Aligned_cols=101  Identities=14%  Similarity=0.225  Sum_probs=71.2

Q ss_pred             CchHHHHH-HHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccH-------------HhhhHHHHHHHHHhc
Q psy14717         14 PMAIFELL-DYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADL-------------KTLSATTILKVLHEC   74 (125)
Q Consensus        14 ~~~~~~~~-~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~-------------~~~~~~~e~~~~~~~   74 (125)
                      ..+.|..+ ..|        |.|+||.||++...     .+++.........             ....+.+|+.+++.+
T Consensus         6 ~~~ry~~~~~~i--------g~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l   77 (335)
T PTZ00024          6 ISERYIQKGAHL--------GEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI   77 (335)
T ss_pred             cccchhhhhhcc--------cCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC
Confidence            34566655 346        99999999986432     1112111100000             011356899999999


Q ss_pred             CCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         75 NFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        75 ~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|+|++++++++...+..+++|||+.+ +|.+++.....++++.+..++
T Consensus        78 ~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~  125 (335)
T PTZ00024         78 KHENIMGLVDVYVEGDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCIL  125 (335)
T ss_pred             CCcceeeeeEEEecCCcEEEEEecccc-CHHHHHHhcCCCCHHHHHHHH
Confidence            999999999999999999999999985 999999887778877765543

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.97  E-value=4.8e-10  Score=75.34  Aligned_cols=87  Identities=21%  Similarity=0.146  Sum_probs=60.0

Q ss_pred             CCCCCchhHHHHHHHHHhhcCCCccccHHh----hhHHHHHHHHHh-cCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         32 LPAGIFTDSFRDFVDRCLKKNPSERADLKT----LSATTILKVLHE-CNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~----~~~~~e~~~~~~-~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      +|.|+||.||++..     +........+.    .....|+..... .+|+|++++++.+..++..|++|||+++|+|.+
T Consensus        24 lg~g~~g~v~~~~~-----~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~   98 (267)
T PHA03390         24 LIDGKFGKVSVLKH-----KPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFD   98 (267)
T ss_pred             ecCCCceEEEEEEE-----cCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHH
Confidence            49999999998432     11111111100    000112322222 379999999999999999999999999999999


Q ss_pred             HHHHcCCCCHHHHhhhh
Q psy14717        107 ILKKAGKIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~~~~l~~~~~~~~~  123 (125)
                      +++....++++.+..++
T Consensus        99 ~l~~~~~l~~~~~~~~~  115 (267)
T PHA03390         99 LLKKEGKLSEAEVKKII  115 (267)
T ss_pred             HHHhcCCCCHHHHHHHH
Confidence            99987788988877654

>KOG3653|consensus

Probab=98.97  E-value=6.1e-10  Score=79.02  Aligned_cols=97  Identities=21%  Similarity=0.196  Sum_probs=70.8

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCcccc-HHhhhHHHHHHHHHh--cCCCceeeeeeeEEeCC--
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERAD-LKTLSATTILKVLHE--CNFAHIVGFYGAFISDQ--   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~--~~h~~iv~~~~~~~~~~--   90 (125)
                      .++++++.+        |+|+||.||++....  +.+..+... .....+..|-.|...  +.|+||+++++.-....  
T Consensus       210 ~pl~l~eli--------~~Grfg~V~KaqL~~--~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~  279 (534)
T KOG3653|consen  210 DPLQLLELI--------GRGRFGCVWKAQLDN--RLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD  279 (534)
T ss_pred             CchhhHHHh--------hcCccceeehhhccC--ceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc
Confidence            467888888        999999999986532  111112221 223356677777775  68999999998776655  


Q ss_pred             --eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         91 --DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        91 --~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                        ..|||++|-+.|+|.+||+.+ -++...+.+++
T Consensus       280 ~~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria  313 (534)
T KOG3653|consen  280 RMEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIA  313 (534)
T ss_pred             ccceeEEeeeccCCcHHHHHHhc-cccHHHHHHHH
Confidence              799999999999999999995 57776666554

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=98.96  E-value=7.4e-11  Score=80.11  Aligned_cols=90  Identities=17%  Similarity=0.287  Sum_probs=65.4

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCcccc----HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERAD----LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~~----~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      |.|+||.||++...     .+++........    .....+..|+.+++.++|+|++++++++...+..+++|||+ +|+
T Consensus         9 g~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~   87 (298)
T cd07841           9 GEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETD   87 (298)
T ss_pred             eeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCC
Confidence            99999999986532     111111111110    11123457899999999999999999999999999999999 889


Q ss_pred             HHHHHHHcC-CCCHHHHhhhh
Q psy14717        104 LDLILKKAG-KIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~~-~l~~~~~~~~~  123 (125)
                      |.+++.... .+++..+..++
T Consensus        88 L~~~i~~~~~~~~~~~~~~~~  108 (298)
T cd07841          88 LEKVIKDKSIVLTPADIKSYM  108 (298)
T ss_pred             HHHHHhccCCCCCHHHHHHHH
Confidence            999998765 68877766543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=98.96  E-value=7.5e-10  Score=75.06  Aligned_cols=100  Identities=17%  Similarity=0.284  Sum_probs=71.4

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      .+.|+..+.|        |.|.||.||++....     +++....... ........+|+.+++.+.|+|++++++++..
T Consensus         4 ~~~y~~~~~l--------g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~   75 (293)
T cd07843           4 VDEYEKLNRI--------EEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVG   75 (293)
T ss_pred             hhhhhhhhhh--------cCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEe
Confidence            4578888999        999999999864321     1111111100 1111134579999999999999999999988


Q ss_pred             C--CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         89 D--QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        89 ~--~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .  +..|++|||+.+ +|.+++... ..+++..+..++
T Consensus        76 ~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~  112 (293)
T cd07843          76 SNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLM  112 (293)
T ss_pred             cCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHH
Confidence            7  789999999986 999998875 347887766654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0658|consensus

Probab=98.95  E-value=7.8e-12  Score=85.72  Aligned_cols=90  Identities=18%  Similarity=0.319  Sum_probs=63.4

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHh-----hhHHHHHHHHHhcCCCceeeeeeeEEeCC-
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKT-----LSATTILKVLHECNFAHIVGFYGAFISDQ-   90 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~e~~~~~~~~h~~iv~~~~~~~~~~-   90 (125)
                      .|+..+.+        |.|+||.||++...     .+.+..+.++     .-..+|+++|+.+.|||||++..+|.... 
T Consensus        25 ~~~~~~li--------G~GsFg~Vyq~~~~-----e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~   91 (364)
T KOG0658|consen   25 SYEAVRLI--------GSGSFGVVYQAKLR-----ETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTE   91 (364)
T ss_pred             EEEeeEEE--------eecccceEEEEEEc-----CCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCC
Confidence            45666777        99999999986432     1122222221     13458999999999999999998886532 


Q ss_pred             ----eEEEEEEecCCCCHHHHHHHc----CCCCHHHHh
Q psy14717         91 ----DISICMEYMDGGSLDLILKKA----GKIPEHILG  120 (125)
Q Consensus        91 ----~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~  120 (125)
                          .+.+||||||. +|...++..    ..++.-.++
T Consensus        92 ~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iK  128 (364)
T KOG0658|consen   92 SDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIK  128 (364)
T ss_pred             CchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeH
Confidence                36799999999 999999953    455544443

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.95  E-value=7.1e-10  Score=73.88  Aligned_cols=90  Identities=11%  Similarity=0.112  Sum_probs=60.8

Q ss_pred             CCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE-eCCeEEEEEEecCC
Q psy14717         31 KLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI-SDQDISICMEYMDG  101 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~-~~~~~~iv~e~~~~  101 (125)
                      .+|+|+||.||++...        .+++.............+.+|+.+++.++|||++++++.+. .++..+++|||+.+
T Consensus         2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~   81 (262)
T cd05058           2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH   81 (262)
T ss_pred             cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence            3599999999975421        11121111111112234567889999999999999999765 45568999999999


Q ss_pred             CCHHHHHHHc-CCCCHHHHh
Q psy14717        102 GSLDLILKKA-GKIPEHILG  120 (125)
Q Consensus       102 GsL~~~l~~~-~~l~~~~~~  120 (125)
                      |+|.+++++. ..+++..+.
T Consensus        82 ~~L~~~~~~~~~~~~~~~~~  101 (262)
T cd05058          82 GDLRNFIRSETHNPTVKDLI  101 (262)
T ss_pred             CCHHHHHHhcCCCCCHHHHH
Confidence            9999999875 334554433

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.94  E-value=2e-09  Score=71.75  Aligned_cols=93  Identities=16%  Similarity=0.272  Sum_probs=63.7

Q ss_pred             CCCCCCchhHHHHHHHH-----HhhcCCCccc-cHHh-hhHHHHHHHH-HhcCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         31 KLPAGIFTDSFRDFVDR-----CLKKNPSERA-DLKT-LSATTILKVL-HECNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~~-----~~~~~~~~~~-~~~~-~~~~~e~~~~-~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      .+|.|+||.||++....     +++....... .... .....|..++ ....|+|++++++.+...+.+|+++||+++|
T Consensus         3 ~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   82 (260)
T cd05611           3 PISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGG   82 (260)
T ss_pred             cCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCC
Confidence            35999999999865421     1111111100 0111 1223344433 3458999999999999999999999999999


Q ss_pred             CHHHHHHHcCCCCHHHHhhhh
Q psy14717        103 SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|.++++..+.++++.+..++
T Consensus        83 ~L~~~l~~~~~~~~~~~~~i~  103 (260)
T cd05611          83 DCASLIKTLGGLPEDWAKQYI  103 (260)
T ss_pred             CHHHHHHHcCCCCHHHHHHHH
Confidence            999999987788888776654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=98.94  E-value=8e-10  Score=73.93  Aligned_cols=91  Identities=13%  Similarity=0.199  Sum_probs=62.0

Q ss_pred             CCCCCchhHHHHHHH--------HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe------EEEEE
Q psy14717         32 LPAGIFTDSFRDFVD--------RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISDQD------ISICM   96 (125)
Q Consensus        32 lg~g~fg~v~~~~~~--------~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~------~~iv~   96 (125)
                      +|.|+||.||.+...        .+++........ .....+.+|+.+++.++|+|++++++.+.....      .++++
T Consensus         7 lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~   86 (273)
T cd05035           7 LGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVIL   86 (273)
T ss_pred             cCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEE
Confidence            399999999975421        112221111111 122256789999999999999999998766443      89999


Q ss_pred             EecCCCCHHHHHHHc------CCCCHHHHhhh
Q psy14717         97 EYMDGGSLDLILKKA------GKIPEHILGTI  122 (125)
Q Consensus        97 e~~~~GsL~~~l~~~------~~l~~~~~~~~  122 (125)
                      ||+++|+|..++...      ..+++..+..+
T Consensus        87 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  118 (273)
T cd05035          87 PFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKF  118 (273)
T ss_pred             eccCCCCHHHHHHHhhccCCcccCCHHHHHHH
Confidence            999999999998653      24666555443

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.94  E-value=9.6e-10  Score=73.52  Aligned_cols=99  Identities=23%  Similarity=0.405  Sum_probs=69.8

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCc----cccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSE----RADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~----~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .|++.+.+        |.|+||.||++....     +++.....    ........+.+|+.+++.++|+|++++++.+.
T Consensus         3 ~~~~~~~l--------g~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~   74 (264)
T cd06653           3 NWRLGKLL--------GRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLR   74 (264)
T ss_pred             ceeeeeeE--------ccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEE
Confidence            34555566        999999999864321     11211110    01112225668999999999999999999887


Q ss_pred             eC--CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         88 SD--QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        88 ~~--~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.  ..+++++||+++++|.+++...+.+++..+..++
T Consensus        75 ~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~  112 (264)
T cd06653          75 DPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYT  112 (264)
T ss_pred             cCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            64  4589999999999999999887778877766543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.94  E-value=1.8e-10  Score=76.77  Aligned_cols=91  Identities=22%  Similarity=0.305  Sum_probs=63.9

Q ss_pred             CCCCchhHHHHHHHHH--------hhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         33 PAGIFTDSFRDFVDRC--------LKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        33 g~g~fg~v~~~~~~~~--------~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      |+|+||.||++.....        .+...... ...+.....+|+.+++.++|||++++++.+......++++||+++++
T Consensus         9 g~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   88 (260)
T cd08222           9 GKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRD   88 (260)
T ss_pred             cCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCC
Confidence            9999999997543211        01101000 01122245578889999999999999999999889999999999999


Q ss_pred             HHHHHHHc----CCCCHHHHhhhh
Q psy14717        104 LDLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~----~~l~~~~~~~~~  123 (125)
                      |.+++...    ..+++..+..++
T Consensus        89 l~~~~~~~~~~~~~~~~~~~~~~~  112 (260)
T cd08222          89 LDCKLEELKHTGKTLSENQVCEWF  112 (260)
T ss_pred             HHHHHHHHhhcccccCHHHHHHHH
Confidence            99988642    457777655443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.94  E-value=7.8e-10  Score=75.61  Aligned_cols=101  Identities=21%  Similarity=0.288  Sum_probs=71.5

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCC--ccccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPS--ERADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~--~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      .+...|+.+..+        |.|+||.||.+....     +++....  .........+.+|+.+++.++|+|++++++.
T Consensus        12 ~~~~~y~~~~~l--------g~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~   83 (307)
T cd06607          12 DPEKLFTDLREI--------GHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGC   83 (307)
T ss_pred             Ccchhhhhheee--------cCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            344568888888        999999999764321     1111111  1111122346789999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTI  122 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~  122 (125)
                      +..++..++++||+.+ +|.+++... ..+++..+..+
T Consensus        84 ~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~  120 (307)
T cd06607          84 YLREHTAWLVMEYCLG-SASDILEVHKKPLQEVEIAAI  120 (307)
T ss_pred             EEeCCeEEEEHHhhCC-CHHHHHHHcccCCCHHHHHHH
Confidence            9999999999999985 887777653 56787766554

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.94  E-value=3e-10  Score=76.52  Aligned_cols=90  Identities=16%  Similarity=0.290  Sum_probs=63.8

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI  107 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~  107 (125)
                      |.|.+|.||++...     .+++...............+|+.+++.++|+|++++++.+...+..+++|||+++ +|.++
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~   87 (284)
T cd07836           9 GEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKY   87 (284)
T ss_pred             ccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHH
Confidence            99999999986542     1111111110111112345799999999999999999999999999999999996 89998


Q ss_pred             HHHcC---CCCHHHHhhhh
Q psy14717        108 LKKAG---KIPEHILGTIT  123 (125)
Q Consensus       108 l~~~~---~l~~~~~~~~~  123 (125)
                      +....   .+++..+..++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~  106 (284)
T cd07836          88 MDTHGVRGALDPNTVKSFT  106 (284)
T ss_pred             HHhcCCCCCcCHHHHHHHH
Confidence            87642   47777765543

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=98.94  E-value=3e-09  Score=71.90  Aligned_cols=92  Identities=18%  Similarity=0.212  Sum_probs=62.0

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHH---HhcCCCceeeeeeeEEeCCeEEEEEEecCC
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVL---HECNFAHIVGFYGAFISDQDISICMEYMDG  101 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~---~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~  101 (125)
                      +|+|+||.||++....     +++.......  ........+|..++   ....|+|++.+++.+...+..+++|||+++
T Consensus         2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (279)
T cd05633           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNG   81 (279)
T ss_pred             cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCC
Confidence            5999999999754310     1111111110  11111223343333   335799999999999999999999999999


Q ss_pred             CCHHHHHHHcCCCCHHHHhhhh
Q psy14717        102 GSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      |+|.+++...+.+++..+..++
T Consensus        82 ~~L~~~i~~~~~l~~~~~~~i~  103 (279)
T cd05633          82 GDLHYHLSQHGVFSEKEMRFYA  103 (279)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHH
Confidence            9999999887889988876654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.93  E-value=2.1e-10  Score=76.97  Aligned_cols=91  Identities=19%  Similarity=0.242  Sum_probs=67.4

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCccc-c-HHhhhHHHHHHHHHhcC-CCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSERA-D-LKTLSATTILKVLHECN-FAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~~-~-~~~~~~~~e~~~~~~~~-h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      |.|+||.||++....     +++....... . .....+.+|..+++.+. |+|++++++.+..++..+++||++.+|+|
T Consensus        10 g~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   89 (280)
T cd05581          10 GEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGEL   89 (280)
T ss_pred             cCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcH
Confidence            999999999754320     1111111000 1 11224567889999988 99999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHhhhh
Q psy14717        105 DLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+++++.+.+++..+..++
T Consensus        90 ~~~l~~~~~l~~~~~~~i~  108 (280)
T cd05581          90 LQYIRKYGSLDEKCTRFYA  108 (280)
T ss_pred             HHHHHHcCCCCHHHHHHHH
Confidence            9999987788887776654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.93  E-value=1.7e-10  Score=76.50  Aligned_cols=91  Identities=19%  Similarity=0.272  Sum_probs=65.5

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |.|+||.||++....     +++....... ......+.+|+.+++.++|+|++++++.+...+..++++||+++++|.+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   88 (257)
T cd08225           9 GEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMK   88 (257)
T ss_pred             cCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHH
Confidence            999999999754421     1111111111 1122245689999999999999999999999999999999999999999


Q ss_pred             HHHHcC--CCCHHHHhhhh
Q psy14717        107 ILKKAG--KIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~~~--~l~~~~~~~~~  123 (125)
                      ++....  .+++..+..++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~  107 (257)
T cd08225          89 RINRQRGVLFSEDQILSWF  107 (257)
T ss_pred             HHHhccCCCCCHHHHHHHH
Confidence            997753  36776655443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.93  E-value=6e-10  Score=73.65  Aligned_cols=91  Identities=23%  Similarity=0.391  Sum_probs=67.7

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |.|.+|.+|++...     .+++....... ......+.+|+++++.+.|+|++++++.+...+..+++|||+.+++|.+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~   88 (254)
T cd06627           9 GRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQ   88 (254)
T ss_pred             cccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHH
Confidence            99999999975332     11111111111 1122356789999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCHHHHhhhh
Q psy14717        107 ILKKAGKIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~~~~l~~~~~~~~~  123 (125)
                      ++.....+++..+..++
T Consensus        89 ~~~~~~~l~~~~~~~~~  105 (254)
T cd06627          89 IIKKFGPFPESLVAVYV  105 (254)
T ss_pred             HHHhccCCCHHHHHHHH
Confidence            99887778887765543

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.93  E-value=7.3e-10  Score=73.24  Aligned_cols=92  Identities=22%  Similarity=0.250  Sum_probs=66.8

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      +|.|+||.+|.+....     +++.......  ......+..|+.+++.+.|+|++++++.+..+..++++|||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            4889999999753210     1111111000  01122466789999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCHHHHhhhh
Q psy14717        105 DLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+++.+...+++..+..++
T Consensus        81 ~~~l~~~~~l~~~~~~~~~   99 (250)
T cd05123          81 FSHLSKEGRFSEERARFYA   99 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHH
Confidence            9999987778887766543

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.93  E-value=4.2e-10  Score=75.81  Aligned_cols=90  Identities=22%  Similarity=0.293  Sum_probs=65.5

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |.|.||.||++...     .+++...... .......+.+|+.+++.++|+|++++++.+......++++||+ +++|.+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~   87 (286)
T cd07832           9 GEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSE   87 (286)
T ss_pred             ccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHH
Confidence            99999999985431     1112111111 1112235678999999999999999999999999999999999 999999


Q ss_pred             HHHHc-CCCCHHHHhhhh
Q psy14717        107 ILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~~-~~l~~~~~~~~~  123 (125)
                      ++... ..+++..+..++
T Consensus        88 ~~~~~~~~~~~~~~~~~~  105 (286)
T cd07832          88 VLRDEERPLPEAQVKSYM  105 (286)
T ss_pred             HHHhcCCCCCHHHHHHHH
Confidence            99764 567777665543

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=98.93  E-value=4.6e-10  Score=76.66  Aligned_cols=99  Identities=13%  Similarity=0.188  Sum_probs=68.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      +.|+.++.+        |+|+||.||++...         .+++.............+.+|+.+++.+.|+|++++++.+
T Consensus         7 ~~~~~~~~l--------g~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~   78 (303)
T cd05110           7 TELKRVKVL--------GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVC   78 (303)
T ss_pred             hhceecccc--------ccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEE
Confidence            455666667        99999999985421         0111111111111222466899999999999999999988


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHcC-CCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKAG-KIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~~-~l~~~~~~~~~  123 (125)
                      ..+ ..++++||+++|+|.+++..+. .++++.+..++
T Consensus        79 ~~~-~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~  115 (303)
T cd05110          79 LSP-TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWC  115 (303)
T ss_pred             cCC-CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHH
Confidence            654 4678999999999999998753 57776655443

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>PHA03209 serine/threonine kinase US3; Provisional

Probab=98.92  E-value=8.2e-10  Score=77.25  Aligned_cols=86  Identities=15%  Similarity=0.128  Sum_probs=62.9

Q ss_pred             CCCCCchhHHHHHHHHHhhcCCCccccHH---hhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHH
Q psy14717         32 LPAGIFTDSFRDFVDRCLKKNPSERADLK---TLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLIL  108 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~~~~~~~~~~~~~~---~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l  108 (125)
                      ||.|+||.||++...     ........+   ......|+.+++.++|+||+++++++...+..++++|++.+ +|.+++
T Consensus        74 lg~G~~g~Vy~~~~~-----~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l  147 (357)
T PHA03209         74 LTPGSEGRVFVATKP-----GQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSS-DLYTYL  147 (357)
T ss_pred             ecCCCCeEEEEEEEC-----CCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccCC-cHHHHH
Confidence            499999999985321     111111111   11234689999999999999999999999999999999975 888888


Q ss_pred             HHc-CCCCHHHHhhhh
Q psy14717        109 KKA-GKIPEHILGTIT  123 (125)
Q Consensus       109 ~~~-~~l~~~~~~~~~  123 (125)
                      ... ..+++..+..++
T Consensus       148 ~~~~~~~~~~~~~~i~  163 (357)
T PHA03209        148 TKRSRPLPIDQALIIE  163 (357)
T ss_pred             HhccCCCCHHHHHHHH
Confidence            764 568877766554

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.92  E-value=4.9e-10  Score=74.10  Aligned_cols=91  Identities=25%  Similarity=0.364  Sum_probs=66.9

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |.|+||.+|.+....     +++....... ......+.+|+++++.++|+|++++.+.+......++++||+++++|.+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~   88 (258)
T cd08215           9 GKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQ   88 (258)
T ss_pred             ccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHH
Confidence            999999999754321     1111111111 1222356689999999999999999999999999999999999999999


Q ss_pred             HHHHc----CCCCHHHHhhhh
Q psy14717        107 ILKKA----GKIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~~----~~l~~~~~~~~~  123 (125)
                      ++++.    ..+++..+..++
T Consensus        89 ~l~~~~~~~~~~~~~~~~~i~  109 (258)
T cd08215          89 KIKKQKKEGKPFPEEQILDWF  109 (258)
T ss_pred             HHHHhhccCCCcCHHHHHHHH
Confidence            99874    567777665544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=98.92  E-value=3.4e-09  Score=71.58  Aligned_cols=92  Identities=20%  Similarity=0.232  Sum_probs=62.7

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCcccc--HHhhhHHHH---HHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCC
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSERAD--LKTLSATTI---LKVLHECNFAHIVGFYGAFISDQDISICMEYMDG  101 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~~~--~~~~~~~~e---~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~  101 (125)
                      +|+|+||.||++...     .+++........  ........|   ...++...|++++.+.+.+...+.++++|||+++
T Consensus         2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g   81 (278)
T cd05606           2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG   81 (278)
T ss_pred             cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCC
Confidence            589999999975432     112211111111  111112223   2344456899999999999999999999999999


Q ss_pred             CCHHHHHHHcCCCCHHHHhhhh
Q psy14717        102 GSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      |+|..++...+.+++..++.++
T Consensus        82 ~~L~~~l~~~~~l~~~~~~~~~  103 (278)
T cd05606          82 GDLHYHLSQHGVFSEAEMRFYA  103 (278)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHH
Confidence            9999999887788988877654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG0986|consensus

Probab=98.91  E-value=5.9e-10  Score=79.01  Aligned_cols=92  Identities=20%  Similarity=0.271  Sum_probs=68.8

Q ss_pred             CCCCCchhHHHH------HHHHHhhcCCCccccHHh--hhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRD------FVDRCLKKNPSERADLKT--LSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~------~~~~~~~~~~~~~~~~~~--~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      ||+|+||+|+.+      ....|.+... ++...+.  ...+.|-.++..++.+.||.+-..|.+++.+|+|+..|+||+
T Consensus       193 lGkGGFGEV~acqvraTGKMYAcKkL~K-KRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGD  271 (591)
T KOG0986|consen  193 LGKGGFGEVCACQVRATGKMYACKKLDK-KRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGD  271 (591)
T ss_pred             EecccccceeEEEEecchhhHHHHHHHH-HHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCc
Confidence            499999999942      2222222211 1111111  134578889999999999999999999999999999999999


Q ss_pred             HHHHHHHcC--CCCHHHHhhhhc
Q psy14717        104 LDLILKKAG--KIPEHILGTITS  124 (125)
Q Consensus       104 L~~~l~~~~--~l~~~~~~~~~~  124 (125)
                      |.-.|-+.+  .|+|+.+++++.
T Consensus       272 LkfHiyn~g~~gF~e~ra~FYAA  294 (591)
T KOG0986|consen  272 LKFHIYNHGNPGFDEQRARFYAA  294 (591)
T ss_pred             eeEEeeccCCCCCchHHHHHHHH
Confidence            999888876  799999988763

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.91  E-value=1.7e-10  Score=78.06  Aligned_cols=61  Identities=21%  Similarity=0.311  Sum_probs=52.8

Q ss_pred             hHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         63 SATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        63 ~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+.+|+.++..+ +|+|++.+++.+.....++++|||+++|+|.+++.....+++..++.++
T Consensus        50 ~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~  111 (288)
T cd05583          50 HTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYI  111 (288)
T ss_pred             HHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHH
Confidence            355789999998 6999999999999999999999999999999999887778887766543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=98.91  E-value=7e-10  Score=74.70  Aligned_cols=100  Identities=16%  Similarity=0.212  Sum_probs=69.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH---------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR---------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      +.|++.+.|        |+|.||.||++....         +.+.............+.+|+.+++.+.|+|++++++.+
T Consensus         6 ~~~~~~~~i--------~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~   77 (280)
T cd05043           6 DRVTLSDLL--------QEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVC   77 (280)
T ss_pred             hheEEeeee--------cccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence            456666677        999999999864321         111111111111223466899999999999999999987


Q ss_pred             Ee-CCeEEEEEEecCCCCHHHHHHHc--------CCCCHHHHhhhh
Q psy14717         87 IS-DQDISICMEYMDGGSLDLILKKA--------GKIPEHILGTIT  123 (125)
Q Consensus        87 ~~-~~~~~iv~e~~~~GsL~~~l~~~--------~~l~~~~~~~~~  123 (125)
                      .. +...+++++|+++|+|.+++...        ..+++..+..++
T Consensus        78 ~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~  123 (280)
T cd05043          78 IEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMA  123 (280)
T ss_pred             ecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHH
Confidence            65 56789999999999999999874        246666655443

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.91  E-value=2.2e-09  Score=72.39  Aligned_cols=99  Identities=22%  Similarity=0.446  Sum_probs=69.3

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeeeeEE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYGAFI   87 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~   87 (125)
                      +.+.|++.+.+        |.|+||.||++....     +++....  .......+..|+.++..+ +|+|++++++.+.
T Consensus        14 ~~~~~~~~~~l--------g~g~~~~v~~~~~~~~~~~~a~K~~~~--~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~   83 (282)
T cd06636          14 PAGIFELVEVV--------GNGTYGQVYKGRHVKTGQLAAIKVMDV--TEDEEEEIKLEINMLKKYSHHRNIATYYGAFI   83 (282)
T ss_pred             hhhhhhhheee--------ccCCCeEEEEEEEcCCCcEEEEEEEec--ChHHHHHHHHHHHHHHHhcCCCcEEEEeeehh
Confidence            45688888888        999999999854321     1111111  111222456788888887 7999999999886


Q ss_pred             e------CCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhh
Q psy14717         88 S------DQDISICMEYMDGGSLDLILKKA--GKIPEHILGTI  122 (125)
Q Consensus        88 ~------~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~  122 (125)
                      .      .+..|++|||+++|+|.+++...  ..+++..+..+
T Consensus        84 ~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  126 (282)
T cd06636          84 KKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYI  126 (282)
T ss_pred             cccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHH
Confidence            3      45789999999999999999864  34677665443

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PHA03211 serine/threonine kinase US3; Provisional

Probab=98.90  E-value=1.1e-09  Score=79.21  Aligned_cols=86  Identities=10%  Similarity=0.078  Sum_probs=64.5

Q ss_pred             CCCCCchhHHHHHHHHHhhcCCCccccHH---hhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHH
Q psy14717         32 LPAGIFTDSFRDFVDRCLKKNPSERADLK---TLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLIL  108 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~~~~~~~~~~~~~~---~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l  108 (125)
                      ||.|+||.||++...     ........+   .....+|+.+++.++|+||+++++++......+++||++. |+|..++
T Consensus       177 Lg~G~~G~Vy~a~~~-----~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l  250 (461)
T PHA03211        177 LTPGSEGCVFESSHP-----DYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYL  250 (461)
T ss_pred             EccCCCeEEEEEEEC-----CCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHH
Confidence            589999999985432     212222221   1134579999999999999999999999999999999996 5999988


Q ss_pred             HHc-CCCCHHHHhhhh
Q psy14717        109 KKA-GKIPEHILGTIT  123 (125)
Q Consensus       109 ~~~-~~l~~~~~~~~~  123 (125)
                      ... +.+++..+..++
T Consensus       251 ~~~~~~l~~~~~~~i~  266 (461)
T PHA03211        251 GARLRPLGLAQVTAVA  266 (461)
T ss_pred             HhcCCCCCHHHHHHHH
Confidence            764 468887776654

>KOG0599|consensus

Probab=98.90  E-value=1.9e-09  Score=72.50  Aligned_cols=60  Identities=17%  Similarity=0.211  Sum_probs=54.4

Q ss_pred             HHHHHHHHHh-cCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         64 ATTILKVLHE-CNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        64 ~~~e~~~~~~-~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      -.+|+.++++ ..||+|+++.++|.++.++++|.|.|+.|.|++++...--++|+..+.++
T Consensus        69 T~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iM  129 (411)
T KOG0599|consen   69 TRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIM  129 (411)
T ss_pred             HHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHH
Confidence            4489999999 58999999999999999999999999999999999987778998887764

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.90  E-value=2.9e-09  Score=73.49  Aligned_cols=90  Identities=16%  Similarity=0.182  Sum_probs=63.9

Q ss_pred             CCC--CchhHHHHHHH-----HHhhcCCCccccH-HhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         33 PAG--IFTDSFRDFVD-----RCLKKNPSERADL-KTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        33 g~g--~fg~v~~~~~~-----~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      |.|  +||.||.+...     .+++......... ....+.+|+.++..++|+||+++++++..++..++++||+.+|+|
T Consensus         7 g~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l   86 (328)
T cd08226           7 GRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSA   86 (328)
T ss_pred             CCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCH
Confidence            555  88899975432     1122211111111 123466788888889999999999999999999999999999999


Q ss_pred             HHHHHHc--CCCCHHHHhhh
Q psy14717        105 DLILKKA--GKIPEHILGTI  122 (125)
Q Consensus       105 ~~~l~~~--~~l~~~~~~~~  122 (125)
                      .+++++.  ..+++..+..+
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~  106 (328)
T cd08226          87 NSLLKTYFPEGMSEALIGNI  106 (328)
T ss_pred             HHHHHhhcccCCCHHHHHHH
Confidence            9999875  34777765544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.89  E-value=3e-09  Score=72.06  Aligned_cols=89  Identities=17%  Similarity=0.313  Sum_probs=65.3

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      +|.|++|.+|++....     +++... .........+.+|+.+++.+.|+|++++++.+...+..++++||+++++|.+
T Consensus        27 lg~g~~g~v~~~~~~~~~~~~~iK~~~-~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~  105 (285)
T cd06648          27 IGEGSTGIVCIATDKSTGRQVAVKKMD-LRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTD  105 (285)
T ss_pred             eccCCCeEEEEEEECCCCCEEEEEEEe-ccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHH
Confidence            3999999999753211     111110 0011122246689999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCHHHHhhh
Q psy14717        107 ILKKAGKIPEHILGTI  122 (125)
Q Consensus       107 ~l~~~~~l~~~~~~~~  122 (125)
                      ++.+ ..+++..+..+
T Consensus       106 ~~~~-~~~~~~~~~~~  120 (285)
T cd06648         106 IVTH-TRMNEEQIATV  120 (285)
T ss_pred             HHHh-CCCCHHHHHHH
Confidence            9988 56777665544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=98.88  E-value=9e-10  Score=73.48  Aligned_cols=96  Identities=17%  Similarity=0.203  Sum_probs=66.8

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD   91 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~   91 (125)
                      +.|++.+.|        |.|+||.||++....    +++.....  ......+.+|+.+++.+.|+|++++++.+. .+.
T Consensus         6 ~~~~~~~~i--------g~g~~~~v~~~~~~~~~~~~lK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~   74 (260)
T cd05069           6 ESLRLDVKL--------GQGCFGEVWMGTWNGTTKVAIKTLKPG--TMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEP   74 (260)
T ss_pred             HHeeeeeee--------cCcCCCeEEEEEEcCCceEEEEEcccC--CccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCC
Confidence            456677777        999999999754321    11111111  111224567999999999999999998875 456


Q ss_pred             EEEEEEecCCCCHHHHHHHcC--CCCHHHHhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKAG--KIPEHILGTI  122 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~  122 (125)
                      .+++|||+++|+|.+++....  .+++..+..+
T Consensus        75 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  107 (260)
T cd05069          75 IYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDM  107 (260)
T ss_pred             cEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHH
Confidence            899999999999999998642  3566555443

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=98.88  E-value=4.4e-10  Score=75.65  Aligned_cols=98  Identities=29%  Similarity=0.391  Sum_probs=65.2

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHH-HHhcCCCceeeeeeeEEeCC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKV-LHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~h~~iv~~~~~~~~~~   90 (125)
                      +|++++.|        |.|+||.||++...     .+++.............+..|+.. ++..+|+|++++++.+..++
T Consensus         2 ~~~~~~~i--------g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~   73 (283)
T cd06617           2 DLEVIEEL--------GRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREG   73 (283)
T ss_pred             CceEEEEe--------cccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC
Confidence            34555666        99999999985432     111211111111122344556664 45579999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~~  123 (125)
                      .+|++|||+++ +|.+++...    ..+++..+..++
T Consensus        74 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~  109 (283)
T cd06617          74 DVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIA  109 (283)
T ss_pred             cEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHH
Confidence            99999999985 998888653    357777765543

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=98.88  E-value=1.5e-09  Score=73.17  Aligned_cols=90  Identities=13%  Similarity=0.205  Sum_probs=63.9

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |.|+||.||++...     .+++....... ......+.+|+.+++.+.|+|++++++.+..++..|++|||+. |+|.+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~   87 (285)
T cd07861           9 GEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKK   87 (285)
T ss_pred             cccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHH
Confidence            99999999986432     11121111110 1112245679999999999999999999999999999999998 58998


Q ss_pred             HHHHc---CCCCHHHHhhhh
Q psy14717        107 ILKKA---GKIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~~---~~l~~~~~~~~~  123 (125)
                      ++...   ..+++..++.++
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~  107 (285)
T cd07861          88 YLDSLPKGQYMDAELVKSYL  107 (285)
T ss_pred             HHhcCCCCCcCCHHHHHHHH
Confidence            88653   357777765543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PHA03207 serine/threonine kinase US3; Provisional

Probab=98.88  E-value=1.3e-09  Score=77.21  Aligned_cols=96  Identities=15%  Similarity=0.160  Sum_probs=68.2

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHHH--HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEE
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVDR--CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISIC   95 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv   95 (125)
                      |+++..|        |.|+||.||++....  ...+...+... ......+|+.+++.++|+||+++++.+...+.++++
T Consensus        94 y~i~~~L--------g~G~~g~Vy~~~~~~~~~~~~v~vK~~~-~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv  164 (392)
T PHA03207         94 YNILSSL--------TPGSEGEVFVCTKHGDEQRKKVIVKAVT-GGKTPGREIDILKTISHRAIINLIHAYRWKSTVCMV  164 (392)
T ss_pred             eEEEEee--------cCCCCeEEEEEEEcCCccceeEEEEecc-ccccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence            5566666        999999999742110  00000001000 111345799999999999999999999999999999


Q ss_pred             EEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         96 MEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        96 ~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ||++.+ +|.+++.....+++..+..++
T Consensus       165 ~e~~~~-~l~~~l~~~~~l~~~~~~~i~  191 (392)
T PHA03207        165 MPKYKC-DLFTYVDRSGPLPLEQAITIQ  191 (392)
T ss_pred             ehhcCC-CHHHHHHhcCCCCHHHHHHHH
Confidence            999975 999999776788887776654

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=98.88  E-value=8.7e-10  Score=74.26  Aligned_cols=99  Identities=10%  Similarity=0.113  Sum_probs=69.4

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      ..|+.++.|        |.|+||.||++.+.         .+++.............+.+|+.++..++|+|++.+++.+
T Consensus         7 ~~~~~~~~l--------g~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~   78 (279)
T cd05109           7 TELKKVKVL--------GSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGIC   78 (279)
T ss_pred             hheeeeeec--------CCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEE
Confidence            356667777        99999999986421         0112111111112223566788899999999999999988


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ... ..++++||+++|+|.++++.. +.+++..+..++
T Consensus        79 ~~~-~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~  115 (279)
T cd05109          79 LTS-TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWC  115 (279)
T ss_pred             cCC-CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHH
Confidence            654 578999999999999999874 467877765544

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>PTZ00036 glycogen synthase kinase; Provisional

Probab=98.88  E-value=3e-10  Score=81.59  Aligned_cols=86  Identities=14%  Similarity=0.276  Sum_probs=58.5

Q ss_pred             CCCCCchhHHHHHHHHHhhcCCCccccHH-----hhhHHHHHHHHHhcCCCceeeeeeeEEeC--------CeEEEEEEe
Q psy14717         32 LPAGIFTDSFRDFVDRCLKKNPSERADLK-----TLSATTILKVLHECNFAHIVGFYGAFISD--------QDISICMEY   98 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~e~~~~~~~~h~~iv~~~~~~~~~--------~~~~iv~e~   98 (125)
                      ||.|+||.||++...     ......+.+     .....+|+.+++.+.|+|++++++++...        ..++++|||
T Consensus        74 LG~G~fg~Vy~~~~~-----~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~  148 (440)
T PTZ00036         74 IGNGSFGVVYEAICI-----DTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEF  148 (440)
T ss_pred             EEeCCCEEEEEEEEC-----CCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEec
Confidence            399999999985431     111111111     11234799999999999999998877542        247899999


Q ss_pred             cCCCCHHHHHHH----cCCCCHHHHhhhh
Q psy14717         99 MDGGSLDLILKK----AGKIPEHILGTIT  123 (125)
Q Consensus        99 ~~~GsL~~~l~~----~~~l~~~~~~~~~  123 (125)
                      +++ +|.+++..    ...+++..++.++
T Consensus       149 ~~~-~l~~~~~~~~~~~~~l~~~~~~~~~  176 (440)
T PTZ00036        149 IPQ-TVHKYMKHYARNNHALPLFLVKLYS  176 (440)
T ss_pred             CCc-cHHHHHHHHhhcCCCCCHHHHHHHH
Confidence            997 78777754    2567777766544

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=98.88  E-value=3.3e-10  Score=76.71  Aligned_cols=99  Identities=14%  Similarity=0.204  Sum_probs=67.1

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      ..|+.++.|        |.|+||.||++...     .+++...............+|+.+++.+.|+|++++++++..+.
T Consensus         5 ~~y~~~~~i--------g~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~   76 (291)
T cd07870           5 TSYLNLEKL--------GEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKE   76 (291)
T ss_pred             ceeEEEEEE--------EecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC
Confidence            356666777        99999999985432     11111111111111123557999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ..|+++||+. ++|.+++... ..+++..++.++
T Consensus        77 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~  109 (291)
T cd07870          77 TLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFM  109 (291)
T ss_pred             eEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHH
Confidence            9999999997 5777776553 456666655443

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.87  E-value=5e-09  Score=70.13  Aligned_cols=97  Identities=18%  Similarity=0.343  Sum_probs=66.5

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHHH------HhhcCCCc---------cccHHhhhHHHHHHHHHh-cCCCceee
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVDR------CLKKNPSE---------RADLKTLSATTILKVLHE-CNFAHIVG   81 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~------~~~~~~~~---------~~~~~~~~~~~e~~~~~~-~~h~~iv~   81 (125)
                      |++.+.|        |.|.||.||++....      +++.....         ........+.+|+.++.. +.|+|+++
T Consensus         2 y~~~~~i--------g~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~   73 (269)
T cd08528           2 YAVLEHL--------GSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVR   73 (269)
T ss_pred             chhhhhh--------cCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeee
Confidence            5667777        999999999754321      11111000         001111235578887765 79999999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhh
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKA----GKIPEHILGTI  122 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~  122 (125)
                      +++.+...+..+++|||+++++|.+++...    ..+++..+..+
T Consensus        74 ~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  118 (269)
T cd08528          74 YYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNI  118 (269)
T ss_pred             EEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHH
Confidence            999999999999999999999999988542    35777655544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.86  E-value=6.1e-09  Score=71.59  Aligned_cols=99  Identities=19%  Similarity=0.239  Sum_probs=69.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCC--ccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPS--ERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~--~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      ...|+.+..+        |+|+||.||++...     .+++....  .........+.+|+.+++.++|+|++++++++.
T Consensus        24 ~~~f~~~~~l--------g~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~   95 (317)
T cd06635          24 EKLFTDLREI--------GHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYL   95 (317)
T ss_pred             hhhhhhhhee--------ccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            3456666677        99999999975431     11221111  111112225668999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTI  122 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~  122 (125)
                      .++..+++|||+++ +|.+++..+ ..+++..+..+
T Consensus        96 ~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i  130 (317)
T cd06635          96 REHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAI  130 (317)
T ss_pred             eCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHH
Confidence            99999999999986 888877653 56777665544

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.85  E-value=3.5e-10  Score=76.13  Aligned_cols=91  Identities=21%  Similarity=0.311  Sum_probs=64.3

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcC-CCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECN-FAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      +|.|+||.||++....     +++...............+|+..++.+. |+|++++++.+..++..+++|||+ +|+|.
T Consensus         7 ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~   85 (283)
T cd07830           7 LGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLY   85 (283)
T ss_pred             eccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHH
Confidence            3999999999865421     1111111111112223456888888888 999999999999999999999999 77999


Q ss_pred             HHHHHcC--CCCHHHHhhhh
Q psy14717        106 LILKKAG--KIPEHILGTIT  123 (125)
Q Consensus       106 ~~l~~~~--~l~~~~~~~~~  123 (125)
                      +++....  .+++..+..++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~  105 (283)
T cd07830          86 QLMKDRKGKPFSESVIRSII  105 (283)
T ss_pred             HHHHhcccccCCHHHHHHHH
Confidence            9998754  67777766554

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=98.85  E-value=1.9e-09  Score=71.56  Aligned_cols=91  Identities=20%  Similarity=0.217  Sum_probs=63.4

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEe-CCeEEEEEEecCCCCHH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFIS-DQDISICMEYMDGGSLD  105 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~-~~~~~iv~e~~~~GsL~  105 (125)
                      |.|+||.||.+....     ++++....... .....+.+|+.+++.++|+|++++++.+.. ...++++|||+++++|.
T Consensus         9 g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~   88 (257)
T cd08223           9 GKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLY   88 (257)
T ss_pred             cCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHH
Confidence            999999999754321     11111111111 122245678999999999999999988764 44689999999999999


Q ss_pred             HHHHHc--CCCCHHHHhhhh
Q psy14717        106 LILKKA--GKIPEHILGTIT  123 (125)
Q Consensus       106 ~~l~~~--~~l~~~~~~~~~  123 (125)
                      ++++..  ..+++..+..++
T Consensus        89 ~~l~~~~~~~l~~~~~~~~~  108 (257)
T cd08223          89 HKLKEQKGKLLPENQVVEWF  108 (257)
T ss_pred             HHHHHhcCCCCCHHHHHHHH
Confidence            999874  357777766543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.85  E-value=2.3e-09  Score=72.67  Aligned_cols=99  Identities=18%  Similarity=0.357  Sum_probs=67.0

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~   88 (125)
                      .+.|+....+        |.|+||.||++....     +++....  .......+.+|+.++..+ +|+|++++++.+..
T Consensus        21 ~~~y~~~~~l--------~~g~~~~vy~~~~~~~~~~~aik~~~~--~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~   90 (291)
T cd06639          21 TDTWEIIETI--------GKGTYGKVYKVTNKKDGSLAAVKILDP--ISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYK   90 (291)
T ss_pred             CCCeEEEEEe--------ecCCCeEEEEEEECCCCCEEEEEEecc--cccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence            3456666677        999999999853311     1111100  011122455788888887 89999999999875


Q ss_pred             C-----CeEEEEEEecCCCCHHHHHHH----cCCCCHHHHhhhh
Q psy14717         89 D-----QDISICMEYMDGGSLDLILKK----AGKIPEHILGTIT  123 (125)
Q Consensus        89 ~-----~~~~iv~e~~~~GsL~~~l~~----~~~l~~~~~~~~~  123 (125)
                      .     ...+++|||+++|+|.++++.    ...+++..+..++
T Consensus        91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~  134 (291)
T cd06639          91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYIL  134 (291)
T ss_pred             ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHH
Confidence            4     358999999999999998864    2457776665543

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=98.84  E-value=1.1e-09  Score=79.79  Aligned_cols=102  Identities=18%  Similarity=0.205  Sum_probs=70.2

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      ....|++.+.|        |.|+||.||++...     .+++....... ......+.+|+.++..+.|+|++.+++.+.
T Consensus        30 ~~~rY~i~~~L--------G~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~  101 (496)
T PTZ00283         30 QAKKYWISRVL--------GSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFA  101 (496)
T ss_pred             cCCCEEEEEEE--------ecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeeccee
Confidence            34577787888        99999999975431     12222111111 122234668999999999999999988775


Q ss_pred             eCC--------eEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhhh
Q psy14717         88 SDQ--------DISICMEYMDGGSLDLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~--------~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~~  123 (125)
                      ...        .++++|||+++|+|.++++..    ..+++..+..++
T Consensus       102 ~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~  149 (496)
T PTZ00283        102 KKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLF  149 (496)
T ss_pred             cccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHH
Confidence            432        378999999999999999763    357776665443

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.84  E-value=1.7e-09  Score=71.19  Aligned_cols=91  Identities=24%  Similarity=0.483  Sum_probs=67.3

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      +|.|.+|.+|++....     +++...... ......+.+|+.+++.+.|+|++++.+.+......++++||+++++|.+
T Consensus         8 l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~   86 (253)
T cd05122           8 IGKGGFGEVYKARHKRTGKEVAIKVIKLES-KEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKD   86 (253)
T ss_pred             eccCCceEEEEEEECCCCcEEEEEEecccc-hhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHH
Confidence            3999999999854321     111111111 1122356789999999999999999999999999999999999999999


Q ss_pred             HHHHc-CCCCHHHHhhhh
Q psy14717        107 ILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~~-~~l~~~~~~~~~  123 (125)
                      ++... ..+++..+..++
T Consensus        87 ~~~~~~~~~~~~~~~~i~  104 (253)
T cd05122          87 LLKSTNQTLTESQIAYVC  104 (253)
T ss_pred             HHhhcCCCCCHHHHHHHH
Confidence            99886 577877765543

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.84  E-value=5.7e-09  Score=71.47  Aligned_cols=101  Identities=19%  Similarity=0.281  Sum_probs=71.5

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCC--ccccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPS--ERADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~--~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      ++...|+.++.+        |.|+||.||++....     +++....  .........+.+|+.+++.++|+|++++.++
T Consensus        12 ~~~~~~~~~~~l--------g~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   83 (308)
T cd06634          12 DPEKLFSDLREI--------GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGC   83 (308)
T ss_pred             CcHHHHHHHHhe--------eeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEE
Confidence            455678888888        999999999764321     1111111  1111122245679999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTI  122 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~  122 (125)
                      +...+..|+++||+. |+|.+++... ..+++..+..+
T Consensus        84 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~  120 (308)
T cd06634          84 YLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAV  120 (308)
T ss_pred             EEcCCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHH
Confidence            999999999999997 4888877653 45777766544

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.83  E-value=3.7e-09  Score=69.79  Aligned_cols=92  Identities=26%  Similarity=0.460  Sum_probs=67.4

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC--CeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISD--QDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~--~~~~iv~e~~~~Gs  103 (125)
                      +|.|++|.+|++....     +++....... ......+.+|+..++.++|+|++++++.+...  ...++++||+++++
T Consensus         8 i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~   87 (260)
T cd06606           8 LGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGS   87 (260)
T ss_pred             eeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCc
Confidence            3899999999864320     1111111110 01223566899999999999999999999988  88999999999999


Q ss_pred             HHHHHHHcCCCCHHHHhhhh
Q psy14717        104 LDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~~~l~~~~~~~~~  123 (125)
                      |.+++.+...+++..+..++
T Consensus        88 L~~~~~~~~~~~~~~~~~~~  107 (260)
T cd06606          88 LSSLLKKFGKLPEPVIRKYT  107 (260)
T ss_pred             HHHHHHHcCCCCHHHHHHHH
Confidence            99999987678877765543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>PHA03210 serine/threonine kinase US3; Provisional

Probab=98.81  E-value=7.4e-09  Score=75.61  Aligned_cols=47  Identities=13%  Similarity=0.079  Sum_probs=41.9

Q ss_pred             hHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHH
Q psy14717         63 SATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK  110 (125)
Q Consensus        63 ~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~  110 (125)
                      .+.+|+.++..++|+||+++++++...+..|++++++.+ +|.+++..
T Consensus       209 ~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~  255 (501)
T PHA03210        209 QLENEILALGRLNHENILKIEEILRSEANTYMITQKYDF-DLYSFMYD  255 (501)
T ss_pred             HHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEecccc-CHHHHHhh
Confidence            456899999999999999999999999999999999976 88887765

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.81  E-value=4.7e-09  Score=71.20  Aligned_cols=96  Identities=19%  Similarity=0.255  Sum_probs=65.3

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      .|+....|        |.|.||.||++....     +++....... ......+.+|+.+++.++|+|++++++.+...+
T Consensus         3 ~y~~~~~l--------~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   74 (294)
T PLN00009          3 QYEKVEKI--------GEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK   74 (294)
T ss_pred             ceEEEEEe--------cCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCC
Confidence            45555666        999999999864321     1111111100 011124567999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHcCC--CCHHHHhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAGK--IPEHILGT  121 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~~--l~~~~~~~  121 (125)
                      ..|++|||+++ +|.+++.....  +++..+..
T Consensus        75 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~  106 (294)
T PLN00009         75 RLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKT  106 (294)
T ss_pred             eEEEEEecccc-cHHHHHHhCCCCCcCHHHHHH
Confidence            99999999975 88888876433  45555443

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.80  E-value=2e-09  Score=72.52  Aligned_cols=90  Identities=16%  Similarity=0.269  Sum_probs=63.7

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |.|+||.||++...     .+++....... ......+.+|+.+++.++|+|++++++++......+++|||+. ++|..
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~   87 (284)
T cd07860           9 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKK   87 (284)
T ss_pred             cCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHH
Confidence            99999999985431     11121111110 1111246689999999999999999999999999999999997 58999


Q ss_pred             HHHHc--CCCCHHHHhhhh
Q psy14717        107 ILKKA--GKIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~~--~~l~~~~~~~~~  123 (125)
                      ++...  ..+++..+..++
T Consensus        88 ~~~~~~~~~l~~~~~~~~~  106 (284)
T cd07860          88 FMDASPLSGIPLPLIKSYL  106 (284)
T ss_pred             HHHhCCCCCCCHHHHHHHH
Confidence            88763  457776665543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.80  E-value=1.4e-09  Score=73.10  Aligned_cols=90  Identities=14%  Similarity=0.263  Sum_probs=61.8

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeC--CeEEEEEEecCCCCH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYGAFISD--QDISICMEYMDGGSL  104 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~--~~~~iv~e~~~~GsL  104 (125)
                      |.|+||.||++....     +++...............+|+.++..+ .|+|++++++.+.++  +.++++|||+.+ +|
T Consensus         8 g~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l   86 (282)
T cd07831           8 GEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDM-NL   86 (282)
T ss_pred             cccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCCc-cH
Confidence            999999999864321     112111111111122334688888887 599999999999987  889999999985 88


Q ss_pred             HHHHHHc-CCCCHHHHhhhh
Q psy14717        105 DLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .+.+... ..+++..+..++
T Consensus        87 ~~~l~~~~~~~~~~~~~~~~  106 (282)
T cd07831          87 YELIKGRKRPLPEKRVKSYM  106 (282)
T ss_pred             HHHHHhccCCCCHHHHHHHH
Confidence            8888764 467877766543

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.80  E-value=1.6e-09  Score=71.74  Aligned_cols=90  Identities=22%  Similarity=0.318  Sum_probs=63.9

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCC-ccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPS-ERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |.|+||.+|++...     .+++.... .........+.+|+.+++.++|+|++++++.+......++++||+++++|.+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~   88 (256)
T cd08530           9 GKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSK   88 (256)
T ss_pred             cCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHH
Confidence            99999999975321     01111111 0011122345679999999999999999999999999999999999999999


Q ss_pred             HHHHc----CCCCHHHHhhh
Q psy14717        107 ILKKA----GKIPEHILGTI  122 (125)
Q Consensus       107 ~l~~~----~~l~~~~~~~~  122 (125)
                      ++.+.    ..++++.+..+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~  108 (256)
T cd08530          89 AISKRKKKRKLIPEQEIWRI  108 (256)
T ss_pred             HHHHHHhhcCCCCHHHHHHH
Confidence            98772    45676655443

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=98.79  E-value=1.1e-09  Score=73.82  Aligned_cols=90  Identities=22%  Similarity=0.337  Sum_probs=63.8

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |.|.||.||++...     .+++....... ......+.+|+.+++.++|+|++++++++.+....++++||+.+ +|.+
T Consensus         9 ~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~   87 (284)
T cd07839           9 GEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQ-DLKK   87 (284)
T ss_pred             cccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCC-CHHH
Confidence            99999999985432     01111111100 01112355799999999999999999999999999999999986 8888


Q ss_pred             HHHH-cCCCCHHHHhhhh
Q psy14717        107 ILKK-AGKIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~-~~~l~~~~~~~~~  123 (125)
                      ++.. .+.+++..++.++
T Consensus        88 ~~~~~~~~~~~~~~~~~~  105 (284)
T cd07839          88 YFDSCNGDIDPEIVKSFM  105 (284)
T ss_pred             HHHhcCCCCCHHHHHHHH
Confidence            8765 3568887776554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=98.79  E-value=9.4e-09  Score=70.48  Aligned_cols=90  Identities=18%  Similarity=0.311  Sum_probs=61.5

Q ss_pred             CCCCCCCCchhHHHHHHH-------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe--CCeEEEEEEec
Q psy14717         29 PPKLPAGIFTDSFRDFVD-------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS--DQDISICMEYM   99 (125)
Q Consensus        29 ~~~lg~g~fg~v~~~~~~-------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~--~~~~~iv~e~~   99 (125)
                      ..+||+|+||.||++...       .+++.....   .......+|+.+++.++||||+++++.+..  ...+|+++||+
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~   82 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT---GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA   82 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCC---CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence            346699999999985421       011111111   111245689999999999999999998865  45699999999


Q ss_pred             CCCCHHHHHHHc---------CCCCHHHHhhh
Q psy14717        100 DGGSLDLILKKA---------GKIPEHILGTI  122 (125)
Q Consensus       100 ~~GsL~~~l~~~---------~~l~~~~~~~~  122 (125)
                      .+ +|.+++...         ..+++..++.+
T Consensus        83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i  113 (317)
T cd07868          83 EH-DLWHIIKFHRASKANKKPVQLPRGMVKSL  113 (317)
T ss_pred             CC-CHHHHHHhcccccccCCcccCCHHHHHHH
Confidence            86 898888643         13666665544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.79  E-value=7.2e-09  Score=71.16  Aligned_cols=89  Identities=18%  Similarity=0.258  Sum_probs=63.0

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCc-c-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSE-R-ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~-~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      |.|+||.||++...     .+++..... . .......+.+|+.+++.++|+|++++++++.+.+..|++|||+.+ +|.
T Consensus        30 g~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~  108 (313)
T cd06633          30 GHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLG-SAS  108 (313)
T ss_pred             ccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCCC-CHH
Confidence            99999999986431     111111111 1 111222466799999999999999999999999999999999975 888


Q ss_pred             HHHHHc-CCCCHHHHhhh
Q psy14717        106 LILKKA-GKIPEHILGTI  122 (125)
Q Consensus       106 ~~l~~~-~~l~~~~~~~~  122 (125)
                      +++... ..+++..+..+
T Consensus       109 ~~l~~~~~~l~~~~~~~~  126 (313)
T cd06633         109 DLLEVHKKPLQEVEIAAI  126 (313)
T ss_pred             HHHHhcCCCCCHHHHHHH
Confidence            877653 56777665544

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG1006|consensus

Probab=98.79  E-value=2.5e-09  Score=71.52  Aligned_cols=101  Identities=34%  Similarity=0.449  Sum_probs=71.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHH-hcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLH-ECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~-~~~h~~iv~~~~~~~~~   89 (125)
                      +.++-+..|        |.|.||.|.+-.+..     +++..+..-...++.++..|..... .-+.||||+++|....+
T Consensus        64 ~~Lqdlg~i--------G~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E  135 (361)
T KOG1006|consen   64 DNLQDLGEI--------GNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE  135 (361)
T ss_pred             chHHHHHHh--------cCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC
Confidence            355666667        999999999865431     2222222212233446777877554 46889999999999888


Q ss_pred             CeEEEEEEecCCCCHHHHHHH-----cCCCCHHHHhhhhcC
Q psy14717         90 QDISICMEYMDGGSLDLILKK-----AGKIPEHILGTITSA  125 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~-----~~~l~~~~~~~~~~~  125 (125)
                      ..-||.||+|.- ||..+-+.     ...++|+.+..+++|
T Consensus       136 GdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~Itva  175 (361)
T KOG1006|consen  136 GDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVA  175 (361)
T ss_pred             CceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeee
Confidence            889999999999 88765443     257999988877654

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.79  E-value=8.2e-10  Score=77.52  Aligned_cols=90  Identities=18%  Similarity=0.206  Sum_probs=63.0

Q ss_pred             CCCCCCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH------HhhcCCCc----cccHHhhhHHHHHHHHHhcC
Q psy14717          6 GSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR------CLKKNPSE----RADLKTLSATTILKVLHECN   75 (125)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~------~~~~~~~~----~~~~~~~~~~~e~~~~~~~~   75 (125)
                      -.|++.+...+.|++.+.|        |+|+||.||++.+..      ++++....    ........+.+|+.++..+.
T Consensus         8 ~~~~~~~~~~~~Y~~~~~I--------G~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~   79 (365)
T PRK09188          8 LPGDQIPALSARFVETAVL--------KRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVR   79 (365)
T ss_pred             CcccccccccCCceEccEE--------eecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhcc
Confidence            3567777788899999999        999999999875321      22221111    01112234679999999999


Q ss_pred             CCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         76 FAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        76 h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |+|+++.+..   ....|++||||+|++|..
T Consensus        80 h~~iv~~l~~---~~~~~LVmE~~~G~~L~~  107 (365)
T PRK09188         80 GIGVVPQLLA---TGKDGLVRGWTEGVPLHL  107 (365)
T ss_pred             CCCCCcEEEE---cCCcEEEEEccCCCCHHH
Confidence            9999853322   245799999999999973

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.78  E-value=6.3e-09  Score=71.20  Aligned_cols=61  Identities=20%  Similarity=0.285  Sum_probs=53.3

Q ss_pred             hHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         63 SATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        63 ~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      .+.+|+.+++.++|+||+++++++...+..+++|||+++|+|.++++..  ..+++..+..++
T Consensus        45 ~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~  107 (314)
T cd08216          45 LLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFIL  107 (314)
T ss_pred             HHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHH
Confidence            5678999999999999999999999999999999999999999999874  357777766554

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>KOG0695|consensus

Probab=98.77  E-value=6.2e-09  Score=71.91  Aligned_cols=102  Identities=21%  Similarity=0.361  Sum_probs=71.8

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHH-hhh-HHHHHHHHHh-cCCCceeeeeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLK-TLS-ATTILKVLHE-CNFAHIVGFYGA   85 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~-~~~-~~~e~~~~~~-~~h~~iv~~~~~   85 (125)
                      ...+|++++.|        |+|+|.+|..+...+     +.+....+..+.. ... +..|-.++.+ .+||.+|.++.+
T Consensus       248 ~l~df~ll~vi--------grgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc  319 (593)
T KOG0695|consen  248 GLQDFDLLRVI--------GRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC  319 (593)
T ss_pred             ccccceeeeee--------cCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh
Confidence            34578888888        999999988753310     1111111111111 111 2234444544 689999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      |.+...+++|.||++||+|.-.+.+.+.++|+.++++.
T Consensus       320 fqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys  357 (593)
T KOG0695|consen  320 FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS  357 (593)
T ss_pred             hcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhh
Confidence            99999999999999999999999888899999988764

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.77  E-value=1.2e-08  Score=69.03  Aligned_cols=99  Identities=32%  Similarity=0.393  Sum_probs=66.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcC-CCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECN-FAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~iv~~~~~~~~~   89 (125)
                      +.|+.++.|        |.|+||.||++....     +++.............+.+|+.++..+. |+|++++++.+..+
T Consensus         4 ~~~~~~~~l--------g~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~   75 (288)
T cd06616           4 EDLKDLGEI--------GRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE   75 (288)
T ss_pred             HHhHHHHHh--------CCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC
Confidence            467777888        999999999754321     1111111111122335668888888885 99999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHH-----HcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILK-----KAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~-----~~~~l~~~~~~~~~  123 (125)
                      ...+++|||+.. +|.++..     ....+++..+..++
T Consensus        76 ~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~  113 (288)
T cd06616          76 GDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIA  113 (288)
T ss_pred             CcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHH
Confidence            899999999886 6655432     12467777665543

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=98.77  E-value=3.5e-09  Score=73.51  Aligned_cols=98  Identities=14%  Similarity=0.276  Sum_probs=67.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.|+.++.|        |.|+||.||++...     .+++....... ......+.+|+.+++.++|+||+++++++...
T Consensus        15 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   86 (343)
T cd07878          15 ERYQNLTPV--------GSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPA   86 (343)
T ss_pred             hhhhhheec--------ccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccc
Confidence            577888888        99999999986432     11121111101 11122456899999999999999999887643


Q ss_pred             ------CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 ------QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ------~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                            ...|++++++ +++|..+++. +.+++..++.++
T Consensus        87 ~~~~~~~~~~~~~~~~-~~~l~~~~~~-~~l~~~~~~~i~  124 (343)
T cd07878          87 TSIENFNEVYLVTNLM-GADLNNIVKC-QKLSDEHVQFLI  124 (343)
T ss_pred             ccccccCcEEEEeecC-CCCHHHHHhc-CCCCHHHHHHHH
Confidence                  3479999998 5699988865 568888776654

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG0666|consensus

Probab=98.76  E-value=4.4e-09  Score=71.77  Aligned_cols=80  Identities=20%  Similarity=0.344  Sum_probs=57.9

Q ss_pred             CCCCCCchhHHHHHHH---------HHhhcCCCc-cccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe-CCeEEEEEEec
Q psy14717         31 KLPAGIFTDSFRDFVD---------RCLKKNPSE-RADLKTLSATTILKVLHECNFAHIVGFYGAFIS-DQDISICMEYM   99 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~---------~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~-~~~~~iv~e~~   99 (125)
                      .+|+|+||.||++.-.         .++++...+ -.+--.....||+.+++.++|+|++.+..+|.. +..+|++.||.
T Consensus        31 ~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYA  110 (438)
T KOG0666|consen   31 KIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYA  110 (438)
T ss_pred             eecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhh
Confidence            3499999999996321         112211111 000111245689999999999999999999988 67899999999


Q ss_pred             CCCCHHHHHHHc
Q psy14717        100 DGGSLDLILKKA  111 (125)
Q Consensus       100 ~~GsL~~~l~~~  111 (125)
                      +. +|..+|+-+
T Consensus       111 Eh-DL~~II~fH  121 (438)
T KOG0666|consen  111 EH-DLWHIIKFH  121 (438)
T ss_pred             hh-hHHHHHHHh
Confidence            99 999999876

>KOG0983|consensus

Probab=98.76  E-value=9.8e-10  Score=73.77  Aligned_cols=109  Identities=27%  Similarity=0.397  Sum_probs=78.5

Q ss_pred             CCCCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcC-CCceee
Q psy14717          8 GSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECN-FAHIVG   81 (125)
Q Consensus         8 ~~~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~iv~   81 (125)
                      |.-.+.+.+.++.+..+        |+|+.|.|++..+..     +++.....-.+.+..++++.+.++...+ .|+||+
T Consensus        84 g~r~~~dindl~~l~dl--------GsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~  155 (391)
T KOG0983|consen   84 GQRYQADINDLENLGDL--------GSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQ  155 (391)
T ss_pred             CcccccChHHhhhHHhh--------cCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeee
Confidence            45556666777788888        999999999854321     1111111111122336777888888765 899999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhhcC
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTITSA  125 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~~~  125 (125)
                      .+|+|..+..++|.||.|.. -++.++++- ++++|..+.++.+|
T Consensus       156 c~GyFi~n~dV~IcMelMs~-C~ekLlkrik~piPE~ilGk~tva  199 (391)
T KOG0983|consen  156 CFGYFITNTDVFICMELMST-CAEKLLKRIKGPIPERILGKMTVA  199 (391)
T ss_pred             eeeEEeeCchHHHHHHHHHH-HHHHHHHHhcCCchHHhhhhhHHH
Confidence            99999999999999999988 777777764 78999988877653

>KOG0669|consensus

Probab=98.75  E-value=8.1e-09  Score=68.81  Aligned_cols=97  Identities=15%  Similarity=0.281  Sum_probs=71.4

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHhh-----------hHHHHHHHHHhcCCCceee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL-----------SATTILKVLHECNFAHIVG   81 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~~-----------~~~~e~~~~~~~~h~~iv~   81 (125)
                      +.-+-|+.+.++        |+|+||+||++...     ...+.++.+..           ...+|+.++..++|+|++.
T Consensus        14 ~~~~~yek~~ki--------gqGtfgeVFkAr~~-----n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~n   80 (376)
T KOG0669|consen   14 DEVSKYEKLAKI--------GQGTFGEVFKARSK-----NTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVN   80 (376)
T ss_pred             ecchHHHHHHhc--------CCchHHHHHHHhhc-----CccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHH
Confidence            444678888888        99999999996432     22222222211           3458999999999999999


Q ss_pred             eeeeEEeC--------CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         82 FYGAFISD--------QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        82 ~~~~~~~~--------~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +.+.|...        ..+|+|+++|.. +|..++.+. .+++...++++.
T Consensus        81 liEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~M  130 (376)
T KOG0669|consen   81 LIEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVM  130 (376)
T ss_pred             HHHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHH
Confidence            98877653        349999999999 999999875 567777776653

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=98.75  E-value=2.6e-09  Score=74.66  Aligned_cols=97  Identities=19%  Similarity=0.250  Sum_probs=65.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ...|++++.|        |.|+||.||++...     .+++...... .......+.+|+.+++.++|+||+++++++..
T Consensus        20 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~   91 (359)
T cd07876          20 LKRYQQLKPI--------GSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTP   91 (359)
T ss_pred             hhceEEEEEe--------ecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeecc
Confidence            4567777777        99999999986432     1222211111 11122346689999999999999999998865


Q ss_pred             CC------eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         89 DQ------DISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        89 ~~------~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      ..      .+|++|||+.+ +|...+..  .+++..+..+
T Consensus        92 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~  128 (359)
T cd07876          92 QKSLEEFQDVYLVMELMDA-NLCQVIHM--ELDHERMSYL  128 (359)
T ss_pred             CCCccccceeEEEEeCCCc-CHHHHHhc--cCCHHHHHHH
Confidence            43      47999999987 67766644  4666665544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>PRK10345 hypothetical protein; Provisional

Probab=98.75  E-value=8.2e-09  Score=67.50  Aligned_cols=85  Identities=16%  Similarity=0.229  Sum_probs=58.5

Q ss_pred             CCCCCCchhHHHHHHH--HHhhcCCCccccHHhhhHHHHHHHHHhc-----CCCceeeeeeeEEeCC---eEE-EEEEe-
Q psy14717         31 KLPAGIFTDSFRDFVD--RCLKKNPSERADLKTLSATTILKVLHEC-----NFAHIVGFYGAFISDQ---DIS-ICMEY-   98 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~--~~~~~~~~~~~~~~~~~~~~e~~~~~~~-----~h~~iv~~~~~~~~~~---~~~-iv~e~-   98 (125)
                      .||+|+|+.||.....  .+++....... .....+.+|+.+++.+     .||||+++++++.++.   .++ +++|| 
T Consensus         9 ~LG~G~~~~Vy~hp~~~~k~IKv~~~~~~-~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~   87 (210)
T PRK10345          9 PLGTGRHRKCYAHPEDAQRCIKIVYHRGD-GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFD   87 (210)
T ss_pred             eecCCCceEEEECCCCcCeEEEEEecccc-chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCC
Confidence            4599999999952111  22222221111 1223577899999998     5799999999999874   434 78999 


Q ss_pred             -cCCCCHHHHHHHcCCCCHH
Q psy14717         99 -MDGGSLDLILKKAGKIPEH  117 (125)
Q Consensus        99 -~~~GsL~~~l~~~~~l~~~  117 (125)
                       +.+|||.+++++. .+++.
T Consensus        88 G~~~~tL~~~l~~~-~~~e~  106 (210)
T PRK10345         88 GKPSITLTEFAEQC-RYEED  106 (210)
T ss_pred             CCcchhHHHHHHcc-cccHh
Confidence             6689999999874 56654

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.74  E-value=5.7e-09  Score=70.34  Aligned_cols=90  Identities=18%  Similarity=0.247  Sum_probs=64.4

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCccccH-HhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERADL-KTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |.|.+|.||++...     .+++......... ....+.+|+.+++.++|+|++++++.+...+..++++||++ ++|.+
T Consensus         8 ~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~   86 (283)
T cd07835           8 GEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKK   86 (283)
T ss_pred             cCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHH
Confidence            99999999986432     1122111111001 11235679999999999999999999999999999999996 59999


Q ss_pred             HHHHcC--CCCHHHHhhhh
Q psy14717        107 ILKKAG--KIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~~~--~l~~~~~~~~~  123 (125)
                      ++....  .+++..+..++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~  105 (283)
T cd07835          87 YMDSSPLTGLDPPLIKSYL  105 (283)
T ss_pred             HHhhCCCCCCCHHHHHHHH
Confidence            998754  57777766543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=98.74  E-value=7.2e-09  Score=69.40  Aligned_cols=92  Identities=13%  Similarity=0.225  Sum_probs=60.7

Q ss_pred             CCCCCCchhHHHHHHHH-------HhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeC------CeEEEEE
Q psy14717         31 KLPAGIFTDSFRDFVDR-------CLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISD------QDISICM   96 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~~-------~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~------~~~~iv~   96 (125)
                      .+|+|+||.||++....       +++........ .....+.+|+.+++.++|+|++++++.+...      ...+++|
T Consensus         6 ~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~   85 (272)
T cd05075           6 TLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVIL   85 (272)
T ss_pred             ccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEE
Confidence            34999999999864321       11111111111 1223466799999999999999999876432      2478999


Q ss_pred             EecCCCCHHHHHHHc------CCCCHHHHhhh
Q psy14717         97 EYMDGGSLDLILKKA------GKIPEHILGTI  122 (125)
Q Consensus        97 e~~~~GsL~~~l~~~------~~l~~~~~~~~  122 (125)
                      ||+.+|+|.+++...      ..++++.+..+
T Consensus        86 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  117 (272)
T cd05075          86 PFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKF  117 (272)
T ss_pred             EeCCCCcHHHHHHHhcccCCcccCCHHHHHHH
Confidence            999999999988532      23566655443

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=98.73  E-value=7.6e-09  Score=70.76  Aligned_cols=100  Identities=21%  Similarity=0.287  Sum_probs=69.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      .+.|+..+.|        |.|+||.||++....     +++....... ........+|+.+++.++|+|++++++.+..
T Consensus         6 ~~~y~~~~~i--------g~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   77 (309)
T cd07845           6 VTEFEKLNRI--------GEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVG   77 (309)
T ss_pred             ccceeEeeee--------eecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEec
Confidence            4567777888        999999999864321     1111111100 0111234579999999999999999999876


Q ss_pred             C--CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         89 D--QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        89 ~--~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .  +.++++|||+.+ +|.+++... ..+++..+..++
T Consensus        78 ~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~  114 (309)
T cd07845          78 KHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLM  114 (309)
T ss_pred             CCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHH
Confidence            5  468999999986 898888764 567877766544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=98.73  E-value=2.1e-09  Score=74.98  Aligned_cols=98  Identities=17%  Similarity=0.252  Sum_probs=66.0

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCc-cccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSE-RADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      ..+.|+.++.|        |.|+||.||++...     .+++..... ..........+|+.+++.++|+||+++++++.
T Consensus        15 ~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~   86 (355)
T cd07874          15 VLKRYQNLKPI--------GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFT   86 (355)
T ss_pred             hhhceeEEEEe--------eecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeee
Confidence            34577777777        99999999976432     112211111 11112235668999999999999999999886


Q ss_pred             eC------CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         88 SD------QDISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        88 ~~------~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      ..      ..++++|||+.+ +|.+.+..  .+++..+..+
T Consensus        87 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~  124 (355)
T cd07874          87 PQKSLEEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYL  124 (355)
T ss_pred             ccccccccceeEEEhhhhcc-cHHHHHhh--cCCHHHHHHH
Confidence            54      347999999987 77777654  4666655443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=98.73  E-value=6.4e-09  Score=70.67  Aligned_cols=99  Identities=20%  Similarity=0.309  Sum_probs=67.4

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.|++...+        |.|+||.||++....     +++...... .........+|+.+++.++|||++++++++.+.
T Consensus         7 ~~~~~~~~l--------g~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~   78 (302)
T cd07864           7 DKFDIIGQI--------GEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDK   78 (302)
T ss_pred             hhhheeeee--------cccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCc
Confidence            467777777        999999999864321     111111000 001112455799999999999999999988765


Q ss_pred             C----------eEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         90 Q----------DISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        90 ~----------~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .          .+++++||+++ ++..++... ..+++..+..++
T Consensus        79 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~  122 (302)
T cd07864          79 QDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFM  122 (302)
T ss_pred             chhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHH
Confidence            5          79999999997 777777654 457777766543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.72  E-value=1.3e-08  Score=67.17  Aligned_cols=58  Identities=16%  Similarity=0.182  Sum_probs=48.0

Q ss_pred             HHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         66 TILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        66 ~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|...+....|||++++++.+...+..+++|||+++|+|.+++.+...+++..+..++
T Consensus        34 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~   91 (237)
T cd05576          34 RERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWA   91 (237)
T ss_pred             hHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHH
Confidence            3444444567999999999999999999999999999999999887778887766554

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=98.72  E-value=7.8e-09  Score=70.37  Aligned_cols=104  Identities=17%  Similarity=0.230  Sum_probs=69.9

Q ss_pred             CCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         11 VPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        11 ~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .....+.|+.+..+        |.|+||.||++....     +++...... .........+|+.+++.+.|||++++++
T Consensus         7 ~~~~~~~y~~~~~l--------g~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~   78 (310)
T cd07865           7 FCDEVSKYEKLAKI--------GQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE   78 (310)
T ss_pred             ccchhhheEEEEEe--------ecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEE
Confidence            34556678888888        999999999854321     111111110 0111113457999999999999999999


Q ss_pred             eEEeCC--------eEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         85 AFISDQ--------DISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~--------~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ++....        ..+++|||+.+ +|.+++... ..+++..+..++
T Consensus        79 ~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~  125 (310)
T cd07865          79 ICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVM  125 (310)
T ss_pred             EEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHH
Confidence            887653        35999999986 888888764 357777665543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.72  E-value=1.3e-08  Score=70.47  Aligned_cols=97  Identities=18%  Similarity=0.289  Sum_probs=68.0

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCc-cccHHhhhHHHHHHHHHhc-CCCceeeeeeeEE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSE-RADLKTLSATTILKVLHEC-NFAHIVGFYGAFI   87 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~-~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~   87 (125)
                      .+.|++.+.+        |.|.||.||++...     .++++.... ........+.+|+.+++.+ +|+||+++++++.
T Consensus         6 ~~~y~~~~~l--------g~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~   77 (337)
T cd07852           6 LRKYEILQKL--------GKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIK   77 (337)
T ss_pred             hhHHHHhHhh--------cCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeec
Confidence            4578899999        99999999986432     111111110 0111122455799999999 9999999999886


Q ss_pred             eC--CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhh
Q psy14717         88 SD--QDISICMEYMDGGSLDLILKKAGKIPEHILGT  121 (125)
Q Consensus        88 ~~--~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~  121 (125)
                      ..  ...|++|||+++ +|..++... .+++.....
T Consensus        78 ~~~~~~~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~  111 (337)
T cd07852          78 AENDKDIYLVFEYMET-DLHAVIRAN-ILEDVHKRY  111 (337)
T ss_pred             cCCCceEEEEeccccc-CHHHHHhcC-CCCHHHHHH
Confidence            54  368999999985 999998874 667665544

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=98.71  E-value=7.7e-09  Score=70.65  Aligned_cols=90  Identities=17%  Similarity=0.293  Sum_probs=61.5

Q ss_pred             CCCCchhHHHHHHHH-------HhhcCCCcc--ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC--CeEEEEEEecCC
Q psy14717         33 PAGIFTDSFRDFVDR-------CLKKNPSER--ADLKTLSATTILKVLHECNFAHIVGFYGAFISD--QDISICMEYMDG  101 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-------~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~--~~~~iv~e~~~~  101 (125)
                      |+|+||.||++....       +++......  .........+|+.++..++|||++++++.+...  ..++++|||+++
T Consensus         9 g~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~   88 (316)
T cd07842           9 GRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEH   88 (316)
T ss_pred             ccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCc
Confidence            999999999865421       111111100  001112456799999999999999999999988  789999999987


Q ss_pred             CCHHHHHHHc-----CCCCHHHHhhhh
Q psy14717        102 GSLDLILKKA-----GKIPEHILGTIT  123 (125)
Q Consensus       102 GsL~~~l~~~-----~~l~~~~~~~~~  123 (125)
                       +|.+++...     ..+++..+..++
T Consensus        89 -~l~~~~~~~~~~~~~~~~~~~~~~i~  114 (316)
T cd07842          89 -DLWQIIKFHRQAKRVSIPPSMVKSLL  114 (316)
T ss_pred             -CHHHHHHhhccCCCcCcCHHHHHHHH
Confidence             787777643     246666655443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.71  E-value=1.1e-08  Score=70.79  Aligned_cols=97  Identities=18%  Similarity=0.177  Sum_probs=66.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe-
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFIS-   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~-   88 (125)
                      +.|+.+..|        |.|.||.||++...     .+++...... .......+.+|+.+++.+.|||++++++++.. 
T Consensus        10 ~~y~~~~~i--------g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~   81 (328)
T cd07856          10 NRYVDLQPV--------GMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP   81 (328)
T ss_pred             cceEEEEee--------cccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC
Confidence            356667777        99999999985422     1111111100 11112245679999999999999999999876 


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      ....++++||+. ++|..+++. ..+++..+..+
T Consensus        82 ~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~  113 (328)
T cd07856          82 LEDIYFVTELLG-TDLHRLLTS-RPLEKQFIQYF  113 (328)
T ss_pred             CCcEEEEeehhc-cCHHHHHhc-CCCCHHHHHHH
Confidence            457899999995 599998876 45776655443

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0667|consensus

Probab=98.71  E-value=3.8e-09  Score=77.07  Aligned_cols=96  Identities=17%  Similarity=0.242  Sum_probs=69.6

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcC------CCceeeeeee
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECN------FAHIVGFYGA   85 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~------h~~iv~~~~~   85 (125)
                      .|++++.|        |+|+||.|.++.+.     .|++......  ....+...|+.++..++      .-|+|+++++
T Consensus       187 rY~V~e~L--------GkGtFGQVvk~~d~~T~e~VAIKIiKN~k--~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~  256 (586)
T KOG0667|consen  187 RYEVLEVL--------GKGSFGQVVKAYDHKTGEIVAIKIIKNKK--RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDY  256 (586)
T ss_pred             EEEEEEEe--------cccccceeEEEEecCCCcEEEEEeeccCh--HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeec
Confidence            45566667        99999999996543     1222222211  11113345888888765      3789999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      |...+++|||.|.+.. +|+++|+++  ..|+-..++.++
T Consensus       257 F~fr~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~  295 (586)
T KOG0667|consen  257 FYFRNHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFA  295 (586)
T ss_pred             cccccceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHH
Confidence            9999999999999999 999999987  467777777654

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=98.70  E-value=3.1e-09  Score=73.54  Aligned_cols=99  Identities=15%  Similarity=0.223  Sum_probs=68.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEe-
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFIS-   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~-   88 (125)
                      +.|+..+.|        |.|+||.||++...     .+++........ .....+.+|+.+++.++|+||+++++.+.. 
T Consensus         5 ~~y~~~~~l--------g~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   76 (334)
T cd07855           5 SRYKPIENI--------GSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPP   76 (334)
T ss_pred             hceeeeeee--------ecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhcccc
Confidence            456666677        99999999975432     111111111111 112245579999999999999999988764 


Q ss_pred             ---CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 ---DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ---~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                         ...++++|||+. |+|.+++...+.+++..+..++
T Consensus        77 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~  113 (334)
T cd07855          77 GADFKDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFL  113 (334)
T ss_pred             CCCCceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHH
Confidence               346899999996 5999999877778887776654

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=98.69  E-value=6.5e-09  Score=70.33  Aligned_cols=98  Identities=17%  Similarity=0.282  Sum_probs=62.9

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH------HHhhcCCCcc-ccHHhhhHHHHHHHHHhc---CCCceeeeeeeE
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD------RCLKKNPSER-ADLKTLSATTILKVLHEC---NFAHIVGFYGAF   86 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~------~~~~~~~~~~-~~~~~~~~~~e~~~~~~~---~h~~iv~~~~~~   86 (125)
                      .|++++.|        |.|+||.||++...      .+++...... .........+|+.+++.+   .||||+++++++
T Consensus         2 ~Y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~   73 (290)
T cd07862           2 QYECVAEI--------GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVC   73 (290)
T ss_pred             CcceeeEe--------ccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEE
Confidence            35666667        99999999986431      1111111110 011112344677776654   699999999988


Q ss_pred             Ee-----CCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         87 IS-----DQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        87 ~~-----~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      ..     ...++++|||+++ +|.+++...  ..+++..+..++
T Consensus        74 ~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~  116 (290)
T cd07862          74 TVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKDMM  116 (290)
T ss_pred             ecccCCCCCcEEEEEccCCC-CHHHHHHhCCCCCCCHHHHHHHH
Confidence            53     3458999999985 999999764  347777766544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=98.69  E-value=5.4e-09  Score=73.18  Aligned_cols=97  Identities=20%  Similarity=0.286  Sum_probs=64.8

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCc-cccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSE-RADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ...|++++.|        |+|+||.||++...     .+++..... ........+.+|+.+++.++|+|++++++++..
T Consensus        23 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~   94 (364)
T cd07875          23 LKRYQNLKPI--------GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP   94 (364)
T ss_pred             hcceeEEEEe--------ecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecc
Confidence            3466666677        99999999976432     112221111 111222346689999999999999999988764


Q ss_pred             C------CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         89 D------QDISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        89 ~------~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      .      ..+|++|||+.+ +|.+.+..  .+++..+..+
T Consensus        95 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~~  131 (364)
T cd07875          95 QKSLEEFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYL  131 (364)
T ss_pred             cccccccCeEEEEEeCCCC-CHHHHHHh--cCCHHHHHHH
Confidence            3      358999999987 78777754  3666555443

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=98.68  E-value=3.1e-08  Score=67.81  Aligned_cols=77  Identities=19%  Similarity=0.308  Sum_probs=54.3

Q ss_pred             CCCCCCCchhHHHHHHH-------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe--CCeEEEEEEecC
Q psy14717         30 PKLPAGIFTDSFRDFVD-------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS--DQDISICMEYMD  100 (125)
Q Consensus        30 ~~lg~g~fg~v~~~~~~-------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~--~~~~~iv~e~~~  100 (125)
                      .+||.|+||.||++...       .+++.....   .......+|+.+++.++|+|++++++++..  +..+++++||+.
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~   83 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT---GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE   83 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCC---CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence            35699999999985421       011111110   111245689999999999999999998854  457999999998


Q ss_pred             CCCHHHHHHH
Q psy14717        101 GGSLDLILKK  110 (125)
Q Consensus       101 ~GsL~~~l~~  110 (125)
                      + +|.+++..
T Consensus        84 ~-~l~~~~~~   92 (317)
T cd07867          84 H-DLWHIIKF   92 (317)
T ss_pred             C-cHHHHHHh
Confidence            7 88888764

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.68  E-value=1.1e-08  Score=68.86  Aligned_cols=90  Identities=22%  Similarity=0.288  Sum_probs=64.1

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC--CeEEEEEEecCCCCH
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISD--QDISICMEYMDGGSL  104 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~--~~~~iv~e~~~~GsL  104 (125)
                      |.|+||.||++....     +++...... .......+.+|+.+++.+.|+|++++++.+...  ...++++||+++ +|
T Consensus         8 ~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l   86 (287)
T cd07840           8 GEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DL   86 (287)
T ss_pred             ccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc-cH
Confidence            999999999864321     111111111 011112456799999999999999999999988  789999999986 99


Q ss_pred             HHHHHHc-CCCCHHHHhhhh
Q psy14717        105 DLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       105 ~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .+++.+. ..+++..+..++
T Consensus        87 ~~~~~~~~~~~~~~~~~~i~  106 (287)
T cd07840          87 TGLLDSPEVKFTESQIKCYM  106 (287)
T ss_pred             HHHHhccCCCCCHHHHHHHH
Confidence            9988775 467877765543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0604|consensus

Probab=98.67  E-value=2.5e-08  Score=67.77  Aligned_cols=86  Identities=28%  Similarity=0.409  Sum_probs=64.8

Q ss_pred             CCCCCchhHHHHHHHHHhhcCCCccccHHhh----hHHHHHHHHHh-cCCCceeeeeeeEEeC----CeEEEEEEecCCC
Q psy14717         32 LPAGIFTDSFRDFVDRCLKKNPSERADLKTL----SATTILKVLHE-CNFAHIVGFYGAFISD----QDISICMEYMDGG  102 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~~----~~~~e~~~~~~-~~h~~iv~~~~~~~~~----~~~~iv~e~~~~G  102 (125)
                      ||.|--|+|..     |.++...++.+.+.+    ...+|+++.-. ..|+|||+++++|...    ..+.||||.|.||
T Consensus        70 LG~GinGkV~~-----C~~k~T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGG  144 (400)
T KOG0604|consen   70 LGAGINGKVVQ-----CVHKRTQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGG  144 (400)
T ss_pred             hccccCCceEE-----EEeccchhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccch
Confidence            48888888877     555556655555433    34578876554 5899999999988753    4699999999999


Q ss_pred             CHHHHHHHcC--CCCHHHHhhh
Q psy14717        103 SLDLILKKAG--KIPEHILGTI  122 (125)
Q Consensus       103 sL~~~l~~~~--~l~~~~~~~~  122 (125)
                      .|+..|.+++  .|+|+.+..+
T Consensus       145 eLfsriq~~g~~afTErea~eI  166 (400)
T KOG0604|consen  145 ELFSRIQDRGDQAFTEREASEI  166 (400)
T ss_pred             HHHHHHHHcccccchHHHHHHH
Confidence            9999999875  4888776544

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.67  E-value=7.7e-09  Score=71.95  Aligned_cols=99  Identities=19%  Similarity=0.312  Sum_probs=68.1

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      .+.|+.+..|        |.|.||.||++...     .+++...... .......+.+|+.+++.++|+||+++++.+..
T Consensus        14 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   85 (343)
T cd07880          14 PDRYRDLKQV--------GSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTP   85 (343)
T ss_pred             ccceEEEEEe--------eecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecC
Confidence            3456666777        99999999986432     1112111111 11112245689999999999999999998876


Q ss_pred             CC------eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQ------DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~------~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..      ..+++|||+ +++|.+++.+ ..+++..++.++
T Consensus        86 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~i~  124 (343)
T cd07880          86 DLSLDRFHDFYLVMPFM-GTDLGKLMKH-EKLSEDRIQFLV  124 (343)
T ss_pred             CccccccceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHH
Confidence            53      358999999 6699998876 578887776554

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.67  E-value=7.4e-09  Score=70.41  Aligned_cols=107  Identities=32%  Similarity=0.488  Sum_probs=71.7

Q ss_pred             CCCCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhc-CCCceee
Q psy14717          8 GSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHEC-NFAHIVG   81 (125)
Q Consensus         8 ~~~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~   81 (125)
                      |...+...+.|+..+.+        |.|+||.||++....     +++.............+.+|+.++... .|+|+++
T Consensus         7 ~~~~~~~~~~~~~~~~l--------g~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~   78 (296)
T cd06618           7 GQKYPADLNDLENLGEI--------GSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVK   78 (296)
T ss_pred             ceeccCCcchheeeeEe--------eccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHh
Confidence            44455566788888888        999999999854321     111111111111222445677766665 5999999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +++++......|++|||+.+ +|..++... ..+++..+..++
T Consensus        79 ~~~~~~~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~  120 (296)
T cd06618          79 CYGYFITDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMT  120 (296)
T ss_pred             hheeeecCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHH
Confidence            99999999999999999865 888877663 567776655443

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=98.67  E-value=1.6e-08  Score=68.48  Aligned_cols=97  Identities=18%  Similarity=0.272  Sum_probs=64.6

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCC
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHEC-NFAHIVGFYGAFISDQ   90 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~   90 (125)
                      |+..+.+        |.|+||.||++...     .+++....... ......+.+|+.+++.+ +|+|++++++++...+
T Consensus         3 y~~~~~l--------g~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~   74 (295)
T cd07837           3 YEKLEKI--------GEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEE   74 (295)
T ss_pred             ceEeeEe--------cccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecC
Confidence            4555566        99999999986432     11111111100 01112456799999998 5699999999998766


Q ss_pred             e-----EEEEEEecCCCCHHHHHHHc-----CCCCHHHHhhhh
Q psy14717         91 D-----ISICMEYMDGGSLDLILKKA-----GKIPEHILGTIT  123 (125)
Q Consensus        91 ~-----~~iv~e~~~~GsL~~~l~~~-----~~l~~~~~~~~~  123 (125)
                      .     .|++|||+++ +|.+++...     ..+++..+..++
T Consensus        75 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~  116 (295)
T cd07837          75 KNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFM  116 (295)
T ss_pred             CCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHH
Confidence            5     8999999997 898888653     246777766553

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0200|consensus

Probab=98.66  E-value=1.3e-08  Score=75.97  Aligned_cols=82  Identities=23%  Similarity=0.314  Sum_probs=62.7

Q ss_pred             CCCCCCchhHHHHHHH------------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEE
Q psy14717         31 KLPAGIFTDSFRDFVD------------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICME   97 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e   97 (125)
                      .+|.|.||.|+++...            .+++.........+...+..|+.+|+.+ .|+|++.+.+.+.....+++++|
T Consensus       303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~E  382 (609)
T KOG0200|consen  303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVE  382 (609)
T ss_pred             eeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEE
Confidence            5699999999976421            1112211222222334677899999996 69999999999999999999999


Q ss_pred             ecCCCCHHHHHHHcC
Q psy14717         98 YMDGGSLDLILKKAG  112 (125)
Q Consensus        98 ~~~~GsL~~~l~~~~  112 (125)
                      |+..|+|.++++.++
T Consensus       383 y~~~G~L~~~Lr~~r  397 (609)
T KOG0200|consen  383 YAEHGDLLEFLRKKR  397 (609)
T ss_pred             eccCCcHHHHHHhcc
Confidence            999999999999865

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.65  E-value=1e-08  Score=68.89  Aligned_cols=91  Identities=20%  Similarity=0.323  Sum_probs=65.6

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      +|+|.||.||.+....     +++...... .......+.+|+.+++.++|+|++++++.+......++++||+++ +|.
T Consensus         7 ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~   85 (282)
T cd07829           7 LGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDM-DLK   85 (282)
T ss_pred             ccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcCc-CHH
Confidence            3999999999865431     111111110 011112455799999999999999999999999999999999995 999


Q ss_pred             HHHHHc-CCCCHHHHhhhh
Q psy14717        106 LILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       106 ~~l~~~-~~l~~~~~~~~~  123 (125)
                      +++.+. ..+++..+..++
T Consensus        86 ~~i~~~~~~~~~~~~~~~~  104 (282)
T cd07829          86 KYLDKRPGPLSPNLIKSIM  104 (282)
T ss_pred             HHHHhhccCCCHHHHHHHH
Confidence            999886 468877766544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.65  E-value=7.6e-09  Score=71.72  Aligned_cols=98  Identities=13%  Similarity=0.180  Sum_probs=68.1

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC-
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISD-   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~-   89 (125)
                      .|+++..+        |.|+||.||++...     .+++...... .........+|+.+++.++|+|++++++.+... 
T Consensus         6 ~y~~~~~l--------g~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~   77 (337)
T cd07858           6 KYVPIKPI--------GRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPH   77 (337)
T ss_pred             ceeEEEEe--------ccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccc
Confidence            45566666        99999999975432     1112111110 111122456799999999999999999988654 


Q ss_pred             ----CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 ----QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ----~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                          ..+|+++||+. ++|.++++..+.+++..+..++
T Consensus        78 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~  114 (337)
T cd07858          78 REAFNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFL  114 (337)
T ss_pred             ccccCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHH
Confidence                24899999997 5999999887788887776554

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG1152|consensus

Probab=98.65  E-value=4.4e-09  Score=76.61  Aligned_cols=103  Identities=15%  Similarity=0.133  Sum_probs=74.1

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccH-Hhh------hHHHHHHHHHhcC---CC
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADL-KTL------SATTILKVLHECN---FA   77 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~-~~~------~~~~e~~~~~~~~---h~   77 (125)
                      ...+.|..++.+        |.|.||.|+.+.+..     +++...+++.-. .++      .+-.|+.+|..++   |+
T Consensus       558 ~k~s~yttlq~l--------G~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~  629 (772)
T KOG1152|consen  558 KKFSDYTTLQPL--------GEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHE  629 (772)
T ss_pred             cccccceeeeec--------cccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCcc
Confidence            445678888888        999999999865421     111111111111 011      2447999999987   99


Q ss_pred             ceeeeeeeEEeCCeEEEEEEec-CCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         78 HIVGFYGAFISDQDISICMEYM-DGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        78 ~iv~~~~~~~~~~~~~iv~e~~-~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ||+++++.|++++..||+||-= ++-+|+++|..+..++|..+..++
T Consensus       630 NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IF  676 (772)
T KOG1152|consen  630 NILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIF  676 (772)
T ss_pred             chhhhhheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHH
Confidence            9999999999999999999954 345999999998889988766543

>KOG0668|consensus

Probab=98.65  E-value=1.5e-08  Score=66.68  Aligned_cols=97  Identities=11%  Similarity=0.172  Sum_probs=67.4

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCc-cccHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCC--
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSE-RADLKTLSATTILKVLHEC-NFAHIVGFYGAFISDQ--   90 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~--   90 (125)
                      .+.|++++++        |+|.|++||.+......++...+ ...++...+.+|+.++..+ .||||+.++++..++.  
T Consensus        37 ~ddYeivrk~--------GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sk  108 (338)
T KOG0668|consen   37 QDDYEIVRKV--------GRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESK  108 (338)
T ss_pred             cchHHHHHHH--------cCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCcccc
Confidence            4689999999        99999999998753211111111 1224444677999999997 5999999999998865  


Q ss_pred             eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      ...++.||+.+-+...+-   .-++...++++
T Consensus       109 tpaLiFE~v~n~Dfk~ly---~tl~d~dIryY  137 (338)
T KOG0668|consen  109 TPSLIFEYVNNTDFKQLY---PTLTDYDIRYY  137 (338)
T ss_pred             CchhHhhhhccccHHHHh---hhhchhhHHHH
Confidence            478999999996544432   22444444444

>KOG0696|consensus

Probab=98.64  E-value=3.1e-09  Score=75.06  Aligned_cols=99  Identities=20%  Similarity=0.253  Sum_probs=68.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHH--------HHHhhcCCCccccHHhhhH-HHHHHHHHhc-CCCceeeeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFV--------DRCLKKNPSERADLKTLSA-TTILKVLHEC-NFAHIVGFYGA   85 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~--------~~~~~~~~~~~~~~~~~~~-~~e~~~~~~~-~h~~iv~~~~~   85 (125)
                      .+|..+..+        |.|+||.|..+--        .+++++....+.  ...+. ..|-.++.-. +-|.+++++.+
T Consensus       349 tDFnFl~Vl--------GKGSFGKVlLaerkgtdELyAiKiLkKDViiQd--DDvectm~EKrvLAL~~kppFL~qlHSc  418 (683)
T KOG0696|consen  349 TDFNFLMVL--------GKGSFGKVLLAERKGTDELYAIKILKKDVIIQD--DDVECTMVEKRVLALPGKPPFLVQLHSC  418 (683)
T ss_pred             cccceEEEe--------ccCccceeeeecccCcchhhhhhhhccceeeec--CcccceehhhhheecCCCCchHHHHHHH
Confidence            345555666        9999999986321        122222222111  11111 1244444433 56899999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhhc
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITS  124 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~~  124 (125)
                      |.+-+.+|+||||+.||+|.-.|.+.+.+.|+.+.+++.
T Consensus       419 FQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAa  457 (683)
T KOG0696|consen  419 FQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAA  457 (683)
T ss_pred             hhhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhH
Confidence            999999999999999999999999999999999887764

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.64  E-value=5.1e-08  Score=62.03  Aligned_cols=91  Identities=27%  Similarity=0.419  Sum_probs=65.3

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      +|.|++|.+|++....     +++.............+.+|+..++.+.|++++++++.+......++++|++.+++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            4789999999754421     11111111111012356789999999999999999999999899999999999999999


Q ss_pred             HHHHc-CCCCHHHHhhh
Q psy14717        107 ILKKA-GKIPEHILGTI  122 (125)
Q Consensus       107 ~l~~~-~~l~~~~~~~~  122 (125)
                      ++... ..++...+..+
T Consensus        81 ~~~~~~~~~~~~~~~~~   97 (215)
T cd00180          81 LLKENEGKLSEDEILRI   97 (215)
T ss_pred             HHHhccCCCCHHHHHHH
Confidence            99875 35676655444

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0614|consensus

Probab=98.61  E-value=8e-09  Score=74.43  Aligned_cols=93  Identities=23%  Similarity=0.239  Sum_probs=71.7

Q ss_pred             CCCCCCCchhHHHH--------HHHHHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCC
Q psy14717         30 PKLPAGIFTDSFRD--------FVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDG  101 (125)
Q Consensus        30 ~~lg~g~fg~v~~~--------~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~  101 (125)
                      .+||-|+||.|=..        +..+++++...- ....+.++.+|-.+|..+..++||++|..|.++..+|++||-|-|
T Consensus       426 aTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIV-dtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClG  504 (732)
T KOG0614|consen  426 ATLGVGGFGRVELVKVNSQKATFALKILKKKHIV-DTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLG  504 (732)
T ss_pred             hhcccCccceEEEEEecccchHHHHHHHhHhhcc-chhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcC
Confidence            45699999987632        222333332211 112223567899999999999999999999999999999999999


Q ss_pred             CCHHHHHHHcCCCCHHHHhhhh
Q psy14717        102 GSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      |.|+..++.++.|.+..+++++
T Consensus       505 GElWTiLrdRg~Fdd~tarF~~  526 (732)
T KOG0614|consen  505 GELWTILRDRGSFDDYTARFYV  526 (732)
T ss_pred             chhhhhhhhcCCcccchhhhhH
Confidence            9999999999999988887765

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.60  E-value=8e-09  Score=71.20  Aligned_cols=90  Identities=16%  Similarity=0.231  Sum_probs=65.3

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC-----eEEEEEEecCC
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ-----DISICMEYMDG  101 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~-----~~~iv~e~~~~  101 (125)
                      |.|+||.||++....     +++...... .......+.+|+.+++.++|+|++++.+++....     .+|++|||+++
T Consensus         9 g~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~   88 (330)
T cd07834           9 GSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMET   88 (330)
T ss_pred             cCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchhh
Confidence            999999999865321     111111111 0112235668999999999999999999998775     79999999996


Q ss_pred             CCHHHHHHHcCCCCHHHHhhhh
Q psy14717        102 GSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                       +|.+++.+...+++..+..++
T Consensus        89 -~l~~~l~~~~~l~~~~~~~i~  109 (330)
T cd07834          89 -DLHKVIKSPQPLTDDHIQYFL  109 (330)
T ss_pred             -hHHHHHhCCCCCCHHHHHHHH
Confidence             899999887778887766543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0984|consensus

Probab=98.60  E-value=4.6e-08  Score=63.52  Aligned_cols=103  Identities=26%  Similarity=0.381  Sum_probs=74.0

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHh-cCCCceeeeeeeE
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHE-CNFAHIVGFYGAF   86 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~h~~iv~~~~~~   86 (125)
                      -+.+.+..+..+        |+|.||.|-+-.+.     .+.+.......+..+.++++|+.+... ...|++|+++|.+
T Consensus        43 V~ad~L~~i~el--------GrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~  114 (282)
T KOG0984|consen   43 VPADDLVGIEEL--------GRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGAL  114 (282)
T ss_pred             cchhhhhhhhhh--------cCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhh
Confidence            344566666777        99999987753332     122222223233444567789887666 4789999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHH----cCCCCHHHHhhhhc
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKK----AGKIPEHILGTITS  124 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~----~~~l~~~~~~~~~~  124 (125)
                      .+...+||.||.|.. ||..+-++    .+.++|..+.+++.
T Consensus       115 ~regdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~  155 (282)
T KOG0984|consen  115 FREGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAV  155 (282)
T ss_pred             hccccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHH
Confidence            999999999999999 99876554    36789998888765

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=98.60  E-value=4.9e-08  Score=65.38  Aligned_cols=91  Identities=13%  Similarity=0.149  Sum_probs=60.3

Q ss_pred             CCCCCchhHHHHHHH--------HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC------eEEEEE
Q psy14717         32 LPAGIFTDSFRDFVD--------RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQ------DISICM   96 (125)
Q Consensus        32 lg~g~fg~v~~~~~~--------~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~------~~~iv~   96 (125)
                      +|.|+||.||++...        .+++....... ......+.+|+.+++.++|||++++++.+....      ..++++
T Consensus         7 ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~   86 (273)
T cd05074           7 LGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVIL   86 (273)
T ss_pred             ccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEE
Confidence            399999999987532        11221111111 112224668999999999999999999886532      257899


Q ss_pred             EecCCCCHHHHHHHc------CCCCHHHHhhh
Q psy14717         97 EYMDGGSLDLILKKA------GKIPEHILGTI  122 (125)
Q Consensus        97 e~~~~GsL~~~l~~~------~~l~~~~~~~~  122 (125)
                      ||+.+|+|.+++...      ..+++..+..+
T Consensus        87 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~  118 (273)
T cd05074          87 PFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRF  118 (273)
T ss_pred             ecCCCCcHHHHHHHhcccCCCCCCCHHHHHHH
Confidence            999999999887542      13555554443

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=98.59  E-value=6.6e-09  Score=71.96  Aligned_cols=98  Identities=16%  Similarity=0.225  Sum_probs=67.1

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC-
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD-   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~-   89 (125)
                      +.|++.+.+        |.|+||.||++...     .+++...............+|+.+++.++|+|++++++.+... 
T Consensus         5 ~~y~i~~~l--------g~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   76 (336)
T cd07849           5 PRYQNLSYI--------GEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPS   76 (336)
T ss_pred             cceEEEEEE--------EecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeeccc
Confidence            456777777        99999999986432     1111111110111122456799999999999999999877654 


Q ss_pred             ----CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 ----QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ----~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                          ..+++++||+.+ +|..+++. +.+++..+..++
T Consensus        77 ~~~~~~~~lv~e~~~~-~l~~~~~~-~~l~~~~~~~i~  112 (336)
T cd07849          77 FESFNDVYIVQELMET-DLYKLIKT-QHLSNDHIQYFL  112 (336)
T ss_pred             ccccceEEEEehhccc-CHHHHHhc-CCCCHHHHHHHH
Confidence                358999999986 89888866 468887766543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.59  E-value=1.3e-08  Score=70.78  Aligned_cols=98  Identities=18%  Similarity=0.207  Sum_probs=67.6

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ...|+..+.|        |.|+||.||++....     +++....... .....+.+|+.+++.++|+|++++++.+...
T Consensus         4 ~~~y~~~~~L--------g~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~   74 (342)
T cd07854           4 GSRYMDLRPL--------GCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPS   74 (342)
T ss_pred             CcceEEEEEe--------cCCCCEEEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhccc
Confidence            3466777777        999999999854321     1111111111 1122466799999999999999999776654


Q ss_pred             --------------CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 --------------QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 --------------~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                                    ...|++|||+.+ +|.+++.. +.+++..++.++
T Consensus        75 ~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~-~~l~~~~~~~~~  120 (342)
T cd07854          75 GSDLTEDVGSLTELNSVYIVQEYMET-DLANVLEQ-GPLSEEHARLFM  120 (342)
T ss_pred             ccccccccccccccceEEEEeecccc-cHHHHHHc-CCCCHHHHHHHH
Confidence                          358999999985 99998876 468887776654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=98.58  E-value=2.3e-08  Score=69.72  Aligned_cols=97  Identities=19%  Similarity=0.249  Sum_probs=65.9

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ...|+.++.+        |.|+||.||++...     .+++....... ......+.+|+.+++.++|+|++++++++..
T Consensus        15 ~~~y~~~~~l--------g~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   86 (353)
T cd07850          15 LKRYQNLKPI--------GSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTP   86 (353)
T ss_pred             hcceEEEEEe--------ccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeecc
Confidence            3467777777        99999999975432     11121111101 1122245679999999999999999998865


Q ss_pred             C------CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         89 D------QDISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        89 ~------~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      .      ...|++|||+.+ +|.+.+...  +++..+..+
T Consensus        87 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~--l~~~~~~~~  123 (353)
T cd07850          87 QKSLEEFQDVYLVMELMDA-NLCQVIQMD--LDHERMSYL  123 (353)
T ss_pred             CCCccccCcEEEEEeccCC-CHHHHHhhc--CCHHHHHHH
Confidence            4      347999999976 898888663  776665544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=98.57  E-value=3.4e-08  Score=66.71  Aligned_cols=90  Identities=17%  Similarity=0.260  Sum_probs=57.9

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhc---CCCceeeeeeeEEeC-----CeEEEEEEe
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHEC---NFAHIVGFYGAFISD-----QDISICMEY   98 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~---~h~~iv~~~~~~~~~-----~~~~iv~e~   98 (125)
                      |.|+||.||++...     .+++....... ........+|+.++..+   .|+||+++++++...     ..+++++||
T Consensus         9 g~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~   88 (288)
T cd07863           9 GVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEH   88 (288)
T ss_pred             eecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcc
Confidence            99999999985432     11111111100 00111334566666654   799999999988652     458999999


Q ss_pred             cCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         99 MDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        99 ~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      +++ +|.+++...  ..+++..++.++
T Consensus        89 ~~~-~l~~~~~~~~~~~~~~~~~~~~~  114 (288)
T cd07863          89 VDQ-DLRTYLDKVPPPGLPAETIKDLM  114 (288)
T ss_pred             ccc-CHHHHHHhcCCCCCCHHHHHHHH
Confidence            996 999988764  347887776554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.55  E-value=2.5e-08  Score=64.62  Aligned_cols=91  Identities=23%  Similarity=0.355  Sum_probs=65.7

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      +|.|.++.+|++....     +++.............+.+|+..+..+.|+|++++++.+......++++|++++++|.+
T Consensus         7 i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~   86 (225)
T smart00221        7 LGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFD   86 (225)
T ss_pred             eecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHH
Confidence            3889999999864421     11111111111022356689999999999999999999988889999999999999999


Q ss_pred             HHHHcCC-CCHHHHhhh
Q psy14717        107 ILKKAGK-IPEHILGTI  122 (125)
Q Consensus       107 ~l~~~~~-l~~~~~~~~  122 (125)
                      ++..... +++..+..+
T Consensus        87 ~~~~~~~~~~~~~~~~~  103 (225)
T smart00221       87 YLRKKGGKLSEEEARFY  103 (225)
T ss_pred             HHHhcccCCCHHHHHHH
Confidence            9988655 676665544

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.54  E-value=1.1e-08  Score=68.66  Aligned_cols=91  Identities=20%  Similarity=0.304  Sum_probs=64.8

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      +|.|++|.+|++....     +++........ .....+.+|+.+++.++|+|++++++.+..++.+++++||+++ +|.
T Consensus         7 i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~   85 (283)
T cd05118           7 IGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLY   85 (283)
T ss_pred             eecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHH
Confidence            3999999999865421     11111111111 1122456799999999999999999999999999999999986 888


Q ss_pred             HHHHHc-CCCCHHHHhhhh
Q psy14717        106 LILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       106 ~~l~~~-~~l~~~~~~~~~  123 (125)
                      +++... ..+++..+..++
T Consensus        86 ~~l~~~~~~~~~~~~~~~~  104 (283)
T cd05118          86 KLIKDRQRGLPESLIKSYL  104 (283)
T ss_pred             HHHHhhcccCCHHHHHHHH
Confidence            888774 567777665543

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>PTZ00284 protein kinase; Provisional

Probab=98.54  E-value=4.2e-08  Score=71.02  Aligned_cols=96  Identities=17%  Similarity=0.189  Sum_probs=61.1

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcC------CCceeeeeee
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECN------FAHIVGFYGA   85 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~------h~~iv~~~~~   85 (125)
                      .|++++.|        |.|+||.||++...     .+++.....  .........|+.++..+.      |.+++.++++
T Consensus       130 ~y~i~~~l--------G~G~fg~V~~a~~~~~~~~vAvK~i~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~  199 (467)
T PTZ00284        130 RFKILSLL--------GEGTFGKVVEAWDRKRKEYCAVKIVRNV--PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRY  199 (467)
T ss_pred             cEEEEEEE--------EeccCEEEEEEEEcCCCeEEEEEEEecc--hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEE
Confidence            45555556        99999999986432     111211110  011112334666665544      4568888888


Q ss_pred             EEeC-CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         86 FISD-QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~-~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +... ...||+||++ +++|.+++.+++.+++..++.++
T Consensus       200 ~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~  237 (467)
T PTZ00284        200 FQNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQII  237 (467)
T ss_pred             EEcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHH
Confidence            8764 4689999988 55999999887788887776654

>KOG2345|consensus

Probab=98.51  E-value=1.7e-08  Score=66.84  Aligned_cols=103  Identities=13%  Similarity=0.026  Sum_probs=75.8

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      ....+|++.+.+        |.|+|+-|+.+...     .++++..... ........+|+..-+..+|||+++++++..
T Consensus        18 In~~Ryri~~~L--------geGGfsfv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l   88 (302)
T KOG2345|consen   18 INNKRYRIQRLL--------GEGGFSFVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQL   88 (302)
T ss_pred             EcCceEEEeeee--------cCCCceeeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHH
Confidence            344578888888        99999999975421     2444443332 122235678999999999999999987665


Q ss_pred             eC-----CeEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhhhc
Q psy14717         88 SD-----QDISICMEYMDGGSLDLILKKA----GKIPEHILGTITS  124 (125)
Q Consensus        88 ~~-----~~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~~~  124 (125)
                      .+     ...||+.+|...|||.+.++..    ..++|.++..++.
T Consensus        89 ~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~  134 (302)
T KOG2345|consen   89 REEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFL  134 (302)
T ss_pred             HhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHH
Confidence            43     4599999999999999999875    2688888776653

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.45  E-value=3.6e-08  Score=68.68  Aligned_cols=89  Identities=17%  Similarity=0.317  Sum_probs=59.8

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC------CeEEEEEEecC
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISD------QDISICMEYMD  100 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~------~~~~iv~e~~~  100 (125)
                      |+|+||.||++....     ++++..... .......+.+|+.+++.++|+||+++++.+...      ...+++++++ 
T Consensus        26 g~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-  104 (345)
T cd07877          26 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-  104 (345)
T ss_pred             eecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-
Confidence            999999999764321     111111110 111122456799999999999999999988653      3478888887 


Q ss_pred             CCCHHHHHHHcCCCCHHHHhhhh
Q psy14717        101 GGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       101 ~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++|.++++. +.+++..+..++
T Consensus       105 ~~~L~~~~~~-~~l~~~~~~~i~  126 (345)
T cd07877         105 GADLNNIVKC-QKLTDDHVQFLI  126 (345)
T ss_pred             ccCHHHHHhc-CCCCHHHHHHHH
Confidence            6699988876 468877766544

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.44  E-value=2.9e-08  Score=69.06  Aligned_cols=97  Identities=14%  Similarity=0.298  Sum_probs=67.2

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      .|+....|        |.|.||.||++....     +++....... ......+.+|+.+++.+.|+|++++++.+...+
T Consensus        16 ~y~~~~~i--------g~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   87 (343)
T cd07851          16 RYQNLSPV--------GSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPAS   87 (343)
T ss_pred             ceEEEEEe--------ccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccc
Confidence            56666667        999999999764421     1121111111 111224557999999999999999998887655


Q ss_pred             e------EEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         91 D------ISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        91 ~------~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .      +++++||+. ++|.+++.. ..+++..+..++
T Consensus        88 ~~~~~~~~~lv~e~~~-~~L~~~~~~-~~l~~~~~~~~~  124 (343)
T cd07851          88 SLEDFQDVYLVTHLMG-ADLNNIVKC-QKLSDDHIQFLV  124 (343)
T ss_pred             cccccccEEEEEecCC-CCHHHHHhc-CCCCHHHHHHHH
Confidence            4      899999995 599999887 568887766554

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.42  E-value=1.3e-07  Score=63.60  Aligned_cols=91  Identities=16%  Similarity=0.244  Sum_probs=60.2

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCcccc-HHhhhHHHHHHHHHhc---CCCceeeeeeeEEeCCe-----EEEEEE
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERAD-LKTLSATTILKVLHEC---NFAHIVGFYGAFISDQD-----ISICME   97 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~~-~~~~~~~~e~~~~~~~---~h~~iv~~~~~~~~~~~-----~~iv~e   97 (125)
                      +|.|.||.||++....     +++........ .......+|+.++..+   .|+|++++++.+...+.     ++++||
T Consensus         7 l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e   86 (287)
T cd07838           7 IGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFE   86 (287)
T ss_pred             ecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEeh
Confidence            3999999999865321     11111111110 1111344677766654   69999999999988776     999999


Q ss_pred             ecCCCCHHHHHHHcC--CCCHHHHhhhh
Q psy14717         98 YMDGGSLDLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus        98 ~~~~GsL~~~l~~~~--~l~~~~~~~~~  123 (125)
                      |+++ +|.+++.+..  .+++..+..++
T Consensus        87 ~~~~-~l~~~l~~~~~~~l~~~~~~~~~  113 (287)
T cd07838          87 HVDQ-DLATYLSKCPKPGLPPETIKDLM  113 (287)
T ss_pred             hccc-CHHHHHHHccCCCCCHHHHHHHH
Confidence            9986 8999887742  47877766543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.41  E-value=5e-08  Score=66.44  Aligned_cols=100  Identities=19%  Similarity=0.289  Sum_probs=67.4

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCc-cccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSE-RADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      .+.|++.+.|        |.|+||.||++....     +++..... ..........+|+++++.++|+|++++++.+..
T Consensus         7 ~~~y~~~~~l--------g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   78 (311)
T cd07866           7 LRDYEILGKL--------GEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVE   78 (311)
T ss_pred             cccEEEEEEe--------ccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheec
Confidence            4678888888        999999999854311     11111100 000111235679999999999999999988754


Q ss_pred             C--------CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         89 D--------QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        89 ~--------~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .        ..++++|||+.+ +|...+... ..+++..+..++
T Consensus        79 ~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~  121 (311)
T cd07866          79 RPDKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYM  121 (311)
T ss_pred             ccccccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHH
Confidence            3        347999999987 777777653 468887776554

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG1035|consensus

Probab=98.40  E-value=1.2e-07  Score=73.92  Aligned_cols=68  Identities=22%  Similarity=0.296  Sum_probs=51.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      ++|+.+..+        |+|+||.|+++.+.     .++++.+.......-..+.+|+.++.+++|||+|+++..|....
T Consensus       479 ~DFEEL~lL--------GkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~  550 (1351)
T KOG1035|consen  479 NDFEELELL--------GKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVEST  550 (1351)
T ss_pred             hhhHHHHHh--------cCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccC
Confidence            578899999        99999999986542     35666555431112224678999999999999999999987754


Q ss_pred             e
Q psy14717         91 D   91 (125)
Q Consensus        91 ~   91 (125)
                      .
T Consensus       551 ~  551 (1351)
T KOG1035|consen  551 A  551 (1351)
T ss_pred             C
Confidence            3

>KOG0596|consensus

Probab=98.31  E-value=2.8e-06  Score=62.07  Aligned_cols=92  Identities=24%  Similarity=0.262  Sum_probs=69.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCC-ccccHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPS-ERADLKTLSATTILKVLHEC-NFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~-~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~   89 (125)
                      ..|+++.+|        |+|+-+.||++...    .+.++... .....-...+.+|+.++..+ .|.+||+++++-..+
T Consensus       361 ~~Yeilk~i--------G~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d  432 (677)
T KOG0596|consen  361 REYEILKQI--------GSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTD  432 (677)
T ss_pred             chhhHHHhh--------cCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccC
Confidence            478999999        99999999975431    12222222 22222233577999999998 699999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCH
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPE  116 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~  116 (125)
                      ..+|+||||=.. +|..+|++.....+
T Consensus       433 ~~lYmvmE~Gd~-DL~kiL~k~~~~~~  458 (677)
T KOG0596|consen  433 GYLYMVMECGDI-DLNKILKKKKSIDP  458 (677)
T ss_pred             ceEEEEeecccc-cHHHHHHhccCCCc
Confidence            999999999888 99999998754433

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.31  E-value=3.8e-07  Score=63.11  Aligned_cols=90  Identities=16%  Similarity=0.190  Sum_probs=60.5

Q ss_pred             CCCCchhHHHHHHHH-------HhhcCCCccc-cHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeC----CeEEEEEEec
Q psy14717         33 PAGIFTDSFRDFVDR-------CLKKNPSERA-DLKTLSATTILKVLHEC-NFAHIVGFYGAFISD----QDISICMEYM   99 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-------~~~~~~~~~~-~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~----~~~~iv~e~~   99 (125)
                      |.|+||.||++....       +++....... ......+.+|+.+++.+ +|+||+++++.....    ..++++++|+
T Consensus         9 g~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~   88 (332)
T cd07857           9 GQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELM   88 (332)
T ss_pred             cccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecc
Confidence            999999999754321       1111111000 01122456799999887 699999999875432    4589999999


Q ss_pred             CCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717        100 DGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       100 ~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+ +|.+++.....+++..++.++
T Consensus        89 ~~-~L~~~l~~~~~~~~~~~~~~~  111 (332)
T cd07857          89 EA-DLHQIIRSGQPLTDAHFQSFI  111 (332)
T ss_pred             cC-CHHHHHhcCCCCCHHHHHHHH
Confidence            75 999999877788887766554

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.14  E-value=1.1e-06  Score=56.50  Aligned_cols=80  Identities=15%  Similarity=0.208  Sum_probs=52.8

Q ss_pred             CCCCCchhHHHHHHHH---Hhhc-CCCc-cc-c----HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCC
Q psy14717         32 LPAGIFTDSFRDFVDR---CLKK-NPSE-RA-D----LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDG  101 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~---~~~~-~~~~-~~-~----~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~  101 (125)
                      +|+|+||.||++....   +++. .... +. .    .....+.+|+.++..+.|+++....-.+...+..+++|||++|
T Consensus         2 ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g   81 (199)
T TIGR03724         2 IAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEG   81 (199)
T ss_pred             CCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECC
Confidence            5899999999876321   1111 1110 00 0    1122456899999998887765555555666778999999999


Q ss_pred             CCHHHHHHHc
Q psy14717        102 GSLDLILKKA  111 (125)
Q Consensus       102 GsL~~~l~~~  111 (125)
                      ++|.+++...
T Consensus        82 ~~l~~~~~~~   91 (199)
T TIGR03724        82 KPLKDVIEEG   91 (199)
T ss_pred             ccHHHHHhhc
Confidence            9999987663

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1167|consensus

Probab=98.14  E-value=5.2e-06  Score=58.51  Aligned_cols=78  Identities=15%  Similarity=0.287  Sum_probs=58.7

Q ss_pred             CCCCCCchhHHHHHHHHHhhcCCCccccHH-------hhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         31 KLPAGIFTDSFRDFVDRCLKKNPSERADLK-------TLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      ++|.|+|+.||++.....  .......+.+       -.++..|++++..+ .+.||+++.+++..++++.+|+||++.-
T Consensus        43 kigeGsFssv~~a~~~~~--~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~  120 (418)
T KOG1167|consen   43 KIGEGSFSSVYKATDIEQ--DTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHD  120 (418)
T ss_pred             cccccchhhhhhhhHhhh--ccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCcc
Confidence            349999999999876431  0011112211       12577899999986 7999999999999999999999999998


Q ss_pred             CHHHHHHH
Q psy14717        103 SLDLILKK  110 (125)
Q Consensus       103 sL~~~l~~  110 (125)
                      .-.++...
T Consensus       121 ~f~~l~~~  128 (418)
T KOG1167|consen  121 RFRDLYRS  128 (418)
T ss_pred             CHHHHHhc
Confidence            88777755

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.13  E-value=1.4e-06  Score=56.57  Aligned_cols=81  Identities=14%  Similarity=0.182  Sum_probs=56.0

Q ss_pred             CCCCCCchhHHHHHHH---HHhhcCCCcccc-------HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecC
Q psy14717         31 KLPAGIFTDSFRDFVD---RCLKKNPSERAD-------LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMD  100 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~---~~~~~~~~~~~~-------~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~  100 (125)
                      .||.|++|.||++...   .+++........       .......+|+.++..+.|+++.....++......+++|||++
T Consensus         3 ~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   82 (211)
T PRK14879          3 LIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIE   82 (211)
T ss_pred             ccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeC
Confidence            3499999999987432   112211111110       112245679999999999888777767777778899999999


Q ss_pred             CCCHHHHHHHc
Q psy14717        101 GGSLDLILKKA  111 (125)
Q Consensus       101 ~GsL~~~l~~~  111 (125)
                      |++|.+++...
T Consensus        83 G~~L~~~~~~~   93 (211)
T PRK14879         83 GEPLKDLINSN   93 (211)
T ss_pred             CcCHHHHHHhc
Confidence            99999988763

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.09  E-value=2.8e-06  Score=62.76  Aligned_cols=81  Identities=21%  Similarity=0.196  Sum_probs=56.0

Q ss_pred             CCCCCCCCchhHHHHHHH---HHhhc-CCC-cccc-----HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEe
Q psy14717         29 PPKLPAGIFTDSFRDFVD---RCLKK-NPS-ERAD-----LKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEY   98 (125)
Q Consensus        29 ~~~lg~g~fg~v~~~~~~---~~~~~-~~~-~~~~-----~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~   98 (125)
                      ...||+|+||.||++...   .+.++ ... .+..     .....+.+|+.++..+.|++++.....+......+++|||
T Consensus       338 ~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~  417 (535)
T PRK09605        338 DHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEY  417 (535)
T ss_pred             cceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEe
Confidence            345699999999985432   11111 111 0110     1122466899999999999988877666677778999999


Q ss_pred             cCCCCHHHHHH
Q psy14717         99 MDGGSLDLILK  109 (125)
Q Consensus        99 ~~~GsL~~~l~  109 (125)
                      +++++|.+++.
T Consensus       418 ~~g~~L~~~l~  428 (535)
T PRK09605        418 IGGKDLKDVLE  428 (535)
T ss_pred             cCCCcHHHHHH
Confidence            99999999885

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.08  E-value=9.8e-07  Score=61.39  Aligned_cols=95  Identities=18%  Similarity=0.291  Sum_probs=62.0

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      .|+....|        |.|+||.||++...     .+++...... .......+.+|+.+++.+.|+|++++++++....
T Consensus        16 ~y~~~~~i--------g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~   87 (342)
T cd07879          16 RYTSLKQV--------GSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAV   87 (342)
T ss_pred             ceEEEEEe--------eecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccc
Confidence            45555555        99999999986432     1111111110 1111124568999999999999999999887542


Q ss_pred             ------eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         91 ------DISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        91 ------~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                            ..++++||+.. +|..++.  ..+++..+..+
T Consensus        88 ~~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~  122 (342)
T cd07879          88 SGDEFQDFYLVMPYMQT-DLQKIMG--HPLSEDKVQYL  122 (342)
T ss_pred             cCCCCceEEEEeccccc-CHHHHHc--CCCCHHHHHHH
Confidence                  46999999986 8877653  35777666554

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.07  E-value=6.9e-07  Score=65.43  Aligned_cols=45  Identities=13%  Similarity=0.127  Sum_probs=31.5

Q ss_pred             HHHHHHhcCCCce-----eeeeeeEEe--------CCeEEEEEEecCCCCHHHHHHHc
Q psy14717         67 ILKVLHECNFAHI-----VGFYGAFIS--------DQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        67 e~~~~~~~~h~~i-----v~~~~~~~~--------~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      |+.++..++|.++     +.+.++|..        ....|+|+||+++|+|.++++..
T Consensus       222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~  279 (507)
T PLN03224        222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGK  279 (507)
T ss_pred             HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhc
Confidence            5555555655543     555555543        34689999999999999999753

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.04  E-value=1.6e-05  Score=51.81  Aligned_cols=62  Identities=27%  Similarity=0.453  Sum_probs=53.2

Q ss_pred             hhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         62 LSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        62 ~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..+.+|+..++.++|+|++++++.+......++++||+++++|.+++.....++...+..++
T Consensus        32 ~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~   93 (244)
T smart00220       32 ERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYA   93 (244)
T ss_pred             HHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHH
Confidence            35678999999999999999999999989999999999999999999876557766665543

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.02  E-value=2.2e-06  Score=55.24  Aligned_cols=56  Identities=13%  Similarity=0.049  Sum_probs=37.2

Q ss_pred             HHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         66 TILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        66 ~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|+.++..+.++++..... +.... -+|+|||++++++...+.....+++..+..++
T Consensus        68 ~E~~~l~~l~~~~v~~p~~-~~~~~-~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~  123 (190)
T cd05147          68 KEMRNLKRLVTAGIPCPEP-ILLKS-HVLVMEFIGDDGWAAPRLKDAPLSESKARELY  123 (190)
T ss_pred             HHHHHHHHHHHCCCCCCcE-EEecC-CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHH
Confidence            5888999887776643332 22222 38999999998887654444678877665443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1290|consensus

Probab=97.97  E-value=4.2e-06  Score=60.32  Aligned_cols=93  Identities=18%  Similarity=0.219  Sum_probs=63.0

Q ss_pred             CCCCCCchhHHHHHHHHHhhcC---CCccccHHhhhHHHHHHHHHhcC--------CCceeeeeeeEEe----CCeEEEE
Q psy14717         31 KLPAGIFTDSFRDFVDRCLKKN---PSERADLKTLSATTILKVLHECN--------FAHIVGFYGAFIS----DQDISIC   95 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~~~~~~~---~~~~~~~~~~~~~~e~~~~~~~~--------h~~iv~~~~~~~~----~~~~~iv   95 (125)
                      +||.|.|++||.+.++....-+   ..+...........||.+++++.        -..||++++.|.-    ..++|+|
T Consensus        85 KLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMV  164 (590)
T KOG1290|consen   85 KLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMV  164 (590)
T ss_pred             eccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEE
Confidence            4599999999997765221111   11111122334557999888752        2468999999965    3469999


Q ss_pred             EEecCCCCHHHHHHHc--CCCCHHHHhhhhc
Q psy14717         96 MEYMDGGSLDLILKKA--GKIPEHILGTITS  124 (125)
Q Consensus        96 ~e~~~~GsL~~~l~~~--~~l~~~~~~~~~~  124 (125)
                      .|++.. +|..+|...  +.++-..++.+|.
T Consensus       165 fEvLGd-nLLklI~~s~YrGlpl~~VK~I~~  194 (590)
T KOG1290|consen  165 FEVLGD-NLLKLIKYSNYRGLPLSCVKEICR  194 (590)
T ss_pred             ehhhhh-HHHHHHHHhCCCCCcHHHHHHHHH
Confidence            999988 888888875  6788877776653

>KOG0671|consensus

Probab=97.95  E-value=1.1e-05  Score=56.42  Aligned_cols=98  Identities=20%  Similarity=0.167  Sum_probs=66.1

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCC------Cceeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNF------AHIVGFY   83 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h------~~iv~~~   83 (125)
                      ...|.++..+        |.|+||.|.++.+..     +++...  .+........-|+.++..+.+      .-++++.
T Consensus        88 ~~Ry~i~~~l--------GeGtFGkV~ec~D~~~~~~vAlKIik--~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~  157 (415)
T KOG0671|consen   88 TNRYEIVDLL--------GEGTFGKVVECWDRETKEHVALKIIK--NVDKYREAALIEIEVLQKINESDPNGKFRCVQMR  157 (415)
T ss_pred             ccceehhhhh--------cCCcccceEEEeecCCCceehHHHHH--HHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeee
Confidence            3477888888        999999998754421     111110  011111123358888887732      2367778


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      ++|...+++||+.|.+.. |++++|+.+  .+++-..++.++
T Consensus       158 ~wFdyrghiCivfellG~-S~~dFlk~N~y~~fpi~~ir~m~  198 (415)
T KOG0671|consen  158 DWFDYRGHICIVFELLGL-STFDFLKENNYIPFPIDHIRHMG  198 (415)
T ss_pred             hhhhccCceEEEEeccCh-hHHHHhccCCccccchHHHHHHH
Confidence            889999999999999988 999999986  456777666654

>KOG0664|consensus

Probab=97.92  E-value=3.6e-07  Score=61.82  Aligned_cols=94  Identities=14%  Similarity=0.158  Sum_probs=67.1

Q ss_pred             cCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC-----eEEE
Q psy14717         26 NEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ-----DISI   94 (125)
Q Consensus        26 ~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~-----~~~i   94 (125)
                      .+++..+|-|.||.||...+.     .+.++.+.-. .-....++.+|+++++..+|.|++...+....++     .+|+
T Consensus        55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV  134 (449)
T KOG0664|consen   55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV  134 (449)
T ss_pred             CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence            445666799999999964432     1233322211 1112236779999999999999999998887654     4899


Q ss_pred             EEEecCCCCHHHHHHHcCCCCHHHHh
Q psy14717         95 CMEYMDGGSLDLILKKAGKIPEHILG  120 (125)
Q Consensus        95 v~e~~~~GsL~~~l~~~~~l~~~~~~  120 (125)
                      ++|+|.. +|.++|-....++...++
T Consensus       135 ~TELmQS-DLHKIIVSPQ~Ls~DHvK  159 (449)
T KOG0664|consen  135 LTELMQS-DLHKIIVSPQALTPDHVK  159 (449)
T ss_pred             HHHHHHh-hhhheeccCCCCCcchhh
Confidence            9999999 999998887777765543

>KOG1024|consensus

Probab=97.90  E-value=1.5e-05  Score=56.46  Aligned_cols=83  Identities=17%  Similarity=0.176  Sum_probs=57.3

Q ss_pred             CCCCCCCchhHHHHHHH---------HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeC-CeEEEEEEe
Q psy14717         30 PKLPAGIFTDSFRDFVD---------RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISD-QDISICMEY   98 (125)
Q Consensus        30 ~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~-~~~~iv~e~   98 (125)
                      +-+.+|+||.||.+.+.         .+..+......+ ..-..+++|--.+..+.|+|+.++.++.+.. .+.++++.+
T Consensus       290 ~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~  369 (563)
T KOG1024|consen  290 CLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPA  369 (563)
T ss_pred             hhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEec
Confidence            44589999999988432         111111111111 1222456777777788999999999988764 568999999


Q ss_pred             cCCCCHHHHHHHcC
Q psy14717         99 MDGGSLDLILKKAG  112 (125)
Q Consensus        99 ~~~GsL~~~l~~~~  112 (125)
                      +..|+|..++..++
T Consensus       370 ~~~gNLK~FL~~Cr  383 (563)
T KOG1024|consen  370 TGVGNLKSFLQICR  383 (563)
T ss_pred             cCcchHHHHHHHhc
Confidence            99999999999664

>KOG0603|consensus

Probab=97.90  E-value=3.8e-06  Score=61.85  Aligned_cols=79  Identities=15%  Similarity=0.180  Sum_probs=54.9

Q ss_pred             CCCCCchhHHHHHHHHHhhcCCCccccH-----HhhhHHHHHHHHHh-cCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         32 LPAGIFTDSFRDFVDRCLKKNPSERADL-----KTLSATTILKVLHE-CNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~e~~~~~~-~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      +|.|+|+.+-.+..     ....+....     .......|+.++.. -+|+|++++++.+.+.-.+|+|||.+.||.+.
T Consensus       330 ~~~gs~s~~~~~~~-----~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell  404 (612)
T KOG0603|consen  330 LGEGSFSAVKYCES-----SPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELL  404 (612)
T ss_pred             cCCCCccceeeeec-----cccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHH
Confidence            38899988776433     111111111     11123456655554 58999999999999999999999999999999


Q ss_pred             HHHHHcCCCC
Q psy14717        106 LILKKAGKIP  115 (125)
Q Consensus       106 ~~l~~~~~l~  115 (125)
                      +.+.....+.
T Consensus       405 ~ri~~~~~~~  414 (612)
T KOG0603|consen  405 RRIRSKPEFC  414 (612)
T ss_pred             HHHHhcchhH
Confidence            9888754443

>KOG0195|consensus

Probab=97.85  E-value=3.1e-06  Score=57.39  Aligned_cols=49  Identities=24%  Similarity=0.280  Sum_probs=44.2

Q ss_pred             hHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         63 SATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        63 ~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      .+..|..-++...||||.++.+.+..+..+-++..||+.|||+..++..
T Consensus       233 dfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~  281 (448)
T KOG0195|consen  233 DFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQ  281 (448)
T ss_pred             hhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcC
Confidence            5666777888889999999999999999999999999999999999875

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=97.78  E-value=3.1e-06  Score=56.12  Aligned_cols=91  Identities=12%  Similarity=0.034  Sum_probs=57.1

Q ss_pred             HHHHHHhhcCCC---CCCCCCCchhHHHHHHH---HHhhcCCCccc-cHHh-hh------HHHHHHHHHhcCCCceeeee
Q psy14717         18 FELLDYIVNEPP---PKLPAGIFTDSFRDFVD---RCLKKNPSERA-DLKT-LS------ATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        18 ~~~~~~i~~~~~---~~lg~g~fg~v~~~~~~---~~~~~~~~~~~-~~~~-~~------~~~e~~~~~~~~h~~iv~~~   83 (125)
                      .++.+.+.++..   ..+|.|.||.||..-..   .+++.-..+.. .... ..      +.+|+..+.++.|+++..+.
T Consensus        22 ~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~  101 (232)
T PRK10359         22 KEIFDDFLSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLN  101 (232)
T ss_pred             HHHHHHHhhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcce
Confidence            345555555543   34588999999963221   11111111100 1111 11      46888899999999999998


Q ss_pred             eeEEeC--------CeEEEEEEecCCCCHHHHH
Q psy14717         84 GAFISD--------QDISICMEYMDGGSLDLIL  108 (125)
Q Consensus        84 ~~~~~~--------~~~~iv~e~~~~GsL~~~l  108 (125)
                      ..+...        ...+|+|||++|.+|.++.
T Consensus       102 d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~  134 (232)
T PRK10359        102 DFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP  134 (232)
T ss_pred             EeeeecccccccccCCeEEEEEEECCccHHHhh
Confidence            876643        3589999999999997763

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.70  E-value=3.1e-05  Score=49.79  Aligned_cols=56  Identities=11%  Similarity=0.009  Sum_probs=35.4

Q ss_pred             HHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         65 TTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        65 ~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      .+|...+..+.|+++..........  .+++|||++++++.........+++..+..+
T Consensus        67 ~~E~~~l~~l~~~~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i  122 (190)
T cd05145          67 EKEFRNLKRLYEAGVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEEL  122 (190)
T ss_pred             HHHHHHHHHHHhCCCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHH
Confidence            4688888888888875444333332  3899999999865443223345665554443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1163|consensus

Probab=97.63  E-value=1.6e-05  Score=53.06  Aligned_cols=95  Identities=14%  Similarity=0.067  Sum_probs=62.9

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCC-CceeeeeeeE
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNF-AHIVGFYGAF   86 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h-~~iv~~~~~~   86 (125)
                      .....|.++++|        |+|+||.+|.+....     +++..+   ..++.-.+..|..+...+++ ..|..+..+.
T Consensus        12 iv~gky~lvrki--------GsGSFGdIy~~~~i~~ge~VAiK~Es---~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~   80 (341)
T KOG1163|consen   12 IVGGKYKLVRKI--------GSGSFGDIYLGISITSGEEVAIKLES---SKAKHPQLLYESKVYRILQGGVGIPHIRHYG   80 (341)
T ss_pred             eeccceEEEEee--------cCCchhheeeeeeccCCceEEEEeec---ccCCCcchhHHHHHHHHhccCCCCchhhhhc
Confidence            344567777888        999999999865421     121111   11222356678888888765 5555555555


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHH
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKA-GKIPEHIL  119 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~  119 (125)
                      ...+.--+|||+... ||+++.+-+ +.++-+.+
T Consensus        81 ~e~~ynvlVMdLLGP-sLEdLfnfC~R~ftmkTv  113 (341)
T KOG1163|consen   81 TEKDYNVLVMDLLGP-SLEDLFNFCSRRFTMKTV  113 (341)
T ss_pred             cccccceeeeeccCc-cHHHHHHHHhhhhhHHhH
Confidence            666777899999887 999998876 55665443

>PHA02882 putative serine/threonine kinase; Provisional

Probab=97.58  E-value=1.8e-05  Score=53.91  Aligned_cols=54  Identities=19%  Similarity=0.199  Sum_probs=37.6

Q ss_pred             HHHHhcCCCceeeeeeeEEeCC----eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         69 KVLHECNFAHIVGFYGAFISDQ----DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        69 ~~~~~~~h~~iv~~~~~~~~~~----~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..+..+.|+|++.++++.....    ..+++++++.. ++.+.+......++..+..++
T Consensus        75 ~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~  132 (294)
T PHA02882         75 KNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIM  132 (294)
T ss_pred             HHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHH
Confidence            3445578999999998766543    35788888876 777777765556776655443

>KOG0581|consensus

Probab=97.56  E-value=0.00017  Score=50.33  Aligned_cols=60  Identities=50%  Similarity=0.845  Sum_probs=52.4

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      .+.+.++++..|+.+++|++..+.|+.-|+.++.+|+++.+.+|.+.+++           ++||.|.++.
T Consensus       283 ~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qL-----------l~Hpfi~~~~  342 (364)
T KOG0581|consen  283 PYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQL-----------LQHPFIKKFE  342 (364)
T ss_pred             CCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHH-----------hcCHHHhhcc
Confidence            35679999999999999999999999999999999999999999888765           5787776654

>KOG1027|consensus

Probab=97.49  E-value=0.00024  Score=54.36  Aligned_cols=47  Identities=19%  Similarity=0.330  Sum_probs=43.5

Q ss_pred             HHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         64 ATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        64 ~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ..+|+.+++.. .|||||++++.-.+..+.||..|.|.. +|.+++...
T Consensus       549 A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~-sL~dlie~~  596 (903)
T KOG1027|consen  549 AQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC-SLQDLIESS  596 (903)
T ss_pred             HHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-hHHHHHhcc
Confidence            45899999987 799999999999999999999999999 999999884

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=97.27  E-value=0.00024  Score=47.62  Aligned_cols=91  Identities=27%  Similarity=0.385  Sum_probs=62.9

Q ss_pred             CCCCCchhHHHHHHHH--HhhcCCCccccH--HhhhHHHHHHHHHhcCCC-ceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         32 LPAGIFTDSFRDFVDR--CLKKNPSERADL--KTLSATTILKVLHECNFA-HIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~--~~~~~~~~~~~~--~~~~~~~e~~~~~~~~h~-~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      +|.|+|+.||.+....  +.+.........  ....+.+|+.++..+.|+ +++.+.+.+......+++++++.++++.+
T Consensus         8 l~~g~~~~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~   87 (384)
T COG0515           8 LGEGSFGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLED   87 (384)
T ss_pred             ecCCCCeEEEEEEeccEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHH
Confidence            3889999998765431  111111111111  233567899999999888 79999999977777899999999999998


Q ss_pred             HHHHcC---CCCHHHHhhh
Q psy14717        107 ILKKAG---KIPEHILGTI  122 (125)
Q Consensus       107 ~l~~~~---~l~~~~~~~~  122 (125)
                      +++...   .+++.....+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~  106 (384)
T COG0515          88 LLKKIGRKGPLSESEALFI  106 (384)
T ss_pred             HHHhcccccCCCHHHHHHH
Confidence            887753   5666655443

>PRK12274 serine/threonine protein kinase; Provisional

Probab=97.23  E-value=0.0003  Score=46.22  Aligned_cols=74  Identities=11%  Similarity=0.057  Sum_probs=45.7

Q ss_pred             CCCCCCchhHHHHHHH--HHhhcCCCcccc-HH---hhhHHHHHHHHHhcC-CCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         31 KLPAGIFTDSFRDFVD--RCLKKNPSERAD-LK---TLSATTILKVLHECN-FAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~--~~~~~~~~~~~~-~~---~~~~~~e~~~~~~~~-h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      .|++|.||+|+..-..  ++.........- ..   ...+.+|+.++..++ |++++.++++    +..+++|||+.|++
T Consensus         9 ~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~   84 (218)
T PRK12274          9 PLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAA   84 (218)
T ss_pred             eecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCcc
Confidence            3589999999942210  011000110000 01   113568999999994 5778888764    34699999999999


Q ss_pred             HHHHH
Q psy14717        104 LDLIL  108 (125)
Q Consensus       104 L~~~l  108 (125)
                      |...+
T Consensus        85 L~~~~   89 (218)
T PRK12274         85 MYQRP   89 (218)
T ss_pred             HHhhh
Confidence            87644

>KOG1165|consensus

Probab=97.20  E-value=0.00011  Score=51.16  Aligned_cols=95  Identities=12%  Similarity=0.066  Sum_probs=63.5

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYGAFISDQ   90 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~   90 (125)
                      .|++-.+|        |.|+||..|.+...     .+++-.+.+   .+.-.+..|....+.+ ..++|.+++..-...-
T Consensus        29 hyrVGkKI--------GeGsFG~lf~G~Nl~nne~VAIKfEPrk---S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~   97 (449)
T KOG1165|consen   29 HYRVGKKI--------GEGSFGVLFLGKNLYNNEPVAIKFEPRK---SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGK   97 (449)
T ss_pred             cceecccc--------ccCcceeeecccccccCceEEEEecccc---CCcchHHHHHHHHHHHcCCCCCCceeeeccccc
Confidence            67777777        99999999987652     122222221   1222455677766665 5677777775444454


Q ss_pred             eEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .-.+|+|++.. ||+++...| +.|+.+.+..++
T Consensus        98 ~NiLVidLLGP-SLEDLFD~CgR~FSvKTV~miA  130 (449)
T KOG1165|consen   98 YNILVIDLLGP-SLEDLFDLCGRRFSVKTVAMIA  130 (449)
T ss_pred             hhhhhhhhhCc-CHHHHHHHhcCcccHHhHHHHH
Confidence            56689999877 999999988 568877665554

>smart00090 RIO RIO-like kinase

Probab=97.13  E-value=0.00014  Score=48.45  Aligned_cols=51  Identities=20%  Similarity=0.077  Sum_probs=31.8

Q ss_pred             HHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCH
Q psy14717         64 ATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE  116 (125)
Q Consensus        64 ~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~  116 (125)
                      +.+|+.++..+.+. .+.+...+... ..+++|||+++++|.........+.+
T Consensus        97 ~~~E~~~L~~L~~~-~i~~p~~~~~~-~~~lV~E~~~g~~L~~~~~~~~~~~~  147 (237)
T smart00090       97 AEKEFRNLQRLYEA-GVPVPKPIAWR-RNVLVMEFIGGDGLPAPRLKDVEPEE  147 (237)
T ss_pred             HHHHHHHHHHHHhc-CCCCCeeeEec-CceEEEEEecCCcccccccccCCcch
Confidence            45789999888653 33333333232 34899999999988776533334443

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=97.13  E-value=0.0001  Score=44.61  Aligned_cols=72  Identities=21%  Similarity=0.185  Sum_probs=49.0

Q ss_pred             CCCCCchhHHHHHHH---HHhhcCCCccccHHhhhHHHHHHHHHhcCC--CceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         32 LPAGIFTDSFRDFVD---RCLKKNPSERADLKTLSATTILKVLHECNF--AHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        32 lg~g~fg~v~~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h--~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      ++.|.++.||++...   .+++...... .  ...+.+|+.++..+.|  .++++++......+..+++|||+.++++..
T Consensus         6 i~~g~~~~v~~~~~~~~~~~iK~~~~~~-~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~   82 (155)
T cd05120           6 LKGGLTNRVYLLGTKDEDYVLKINPSRE-K--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDE   82 (155)
T ss_pred             cccccccceEEEEecCCeEEEEecCCCC-c--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeeccc
Confidence            488999999975431   1112111111 1  2356678888888865  588888887777778999999999987753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=97.02  E-value=3e-05  Score=57.80  Aligned_cols=24  Identities=8%  Similarity=0.253  Sum_probs=20.7

Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      .....|+++||+.+|+|.+++...
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~  229 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSK  229 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhc
Confidence            455799999999999999999764

>KOG0577|consensus

Probab=96.98  E-value=0.0018  Score=48.58  Aligned_cols=54  Identities=33%  Similarity=0.514  Sum_probs=47.6

Q ss_pred             CCCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHhh
Q psy14717          9 SNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL   62 (125)
Q Consensus         9 ~~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~~   62 (125)
                      .|+-..|+-++.+..|+.|.+|+|.++.++..|..|+..|+++.+..+++....
T Consensus       222 kPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~l  275 (948)
T KOG0577|consen  222 KPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEEL  275 (948)
T ss_pred             CCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHH
Confidence            445567889999999999999999999999999999999999999988877654

>KOG1345|consensus

Probab=96.79  E-value=0.00034  Score=47.67  Aligned_cols=92  Identities=17%  Similarity=0.203  Sum_probs=59.0

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeee-eEE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYG-AFI   87 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~-~~~   87 (125)
                      .+.|.+.+.+        |.|.||.+..+.+..     +++-.+...  .....+.+|..---.+ .|.||+.-++ .|.
T Consensus        23 ~d~y~I~k~l--------geG~FgkIlL~eHr~s~t~ivlKavp~p~--tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFq   92 (378)
T KOG1345|consen   23 EDVYTINKQL--------GEGRFGKILLAEHRQSKTRIVLKAVPRPQ--TTQADFVREFHYSFFLSPHQHIIDTYEVAFQ   92 (378)
T ss_pred             hhhhhHHHHh--------cccceeeEEeeeccCCceEEEeeccCcch--hhHHHHHHHhccceeeccchhhhHHHHHHhh
Confidence            3567777777        999999988755431     111122222  2223566676533333 6888887764 567


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHcCCCCHH
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKAGKIPEH  117 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~  117 (125)
                      +.+...+++||+|.|+|.+-+... .+-|.
T Consensus        93 t~d~YvF~qE~aP~gdL~snv~~~-GigE~  121 (378)
T KOG1345|consen   93 TSDAYVFVQEFAPRGDLRSNVEAA-GIGEA  121 (378)
T ss_pred             cCceEEEeeccCccchhhhhcCcc-cccHH
Confidence            777778899999999998866653 34443

>KOG1164|consensus

Probab=96.74  E-value=0.00026  Score=49.13  Aligned_cols=97  Identities=18%  Similarity=0.133  Sum_probs=61.2

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHH------HhhcCCCccccHHhhhHHHHHHHHHhcC----CCceeeeeeeE
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDR------CLKKNPSERADLKTLSATTILKVLHECN----FAHIVGFYGAF   86 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~------~~~~~~~~~~~~~~~~~~~e~~~~~~~~----h~~iv~~~~~~   86 (125)
                      .|.+...|        |+|+||.||.+....      +.+...... ......+..|..++..+.    -+++..+++..
T Consensus        19 ~~~i~~~i--------G~G~fG~V~~v~~~~~~~~~~a~K~e~~~~-~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G   89 (322)
T KOG1164|consen   19 RYKLGKKI--------GEGGFGAVYLVSDKSEKNKEYAKKLEKKEL-GSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHG   89 (322)
T ss_pred             ceEEeeec--------cccCCceEEEEEecCCCCeeEEEEEEEecc-cCCCccchhHHHHHHHHhhhcCCCCCCEEEEec
Confidence            56666777        999999999854321      111111100 001003456778787765    25777888777


Q ss_pred             -EeCCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         87 -ISDQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        87 -~~~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                       ..+.+-||||+.+.. +|.++.+..  +.++...+..++
T Consensus        90 ~~~~~~~~iVM~l~G~-sL~dl~~~~~~~~fs~~T~l~ia  128 (322)
T KOG1164|consen   90 RSTEDFNFIVMSLLGP-SLEDLRKRNPPGRFSRKTVLRIA  128 (322)
T ss_pred             cCCCceeEEEEeccCc-cHHHHHHhCCCCCcCHhHHHHHH
Confidence             467788999999888 999988654  467766555443

>KOG0603|consensus

Probab=96.54  E-value=0.0022  Score=47.77  Aligned_cols=58  Identities=19%  Similarity=0.206  Sum_probs=47.1

Q ss_pred             HHHHHHHHHhcC-CCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhh
Q psy14717         64 ATTILKVLHECN-FAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGT  121 (125)
Q Consensus        64 ~~~e~~~~~~~~-h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~  121 (125)
                      ...|..++..++ ||.++.++..+..+..+++++++..+|.|...+.....+.+...+.
T Consensus        43 t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~  101 (612)
T KOG0603|consen   43 TKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAF  101 (612)
T ss_pred             cccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHHHH
Confidence            335666777765 9999999999999999999999999999999888766666555443

>KOG0983|consensus

Probab=96.42  E-value=0.014  Score=40.08  Aligned_cols=65  Identities=29%  Similarity=0.517  Sum_probs=51.6

Q ss_pred             CCCCCCCchHHHHHHHhhcCCCCCCCCCC-chhHHHHHHHHHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeee
Q psy14717          8 GSNVPRPMAIFELLDYIVNEPPPKLPAGI-FTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus         8 ~~~~~~~~~~~~~~~~i~~~~~~~lg~g~-fg~v~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      ..|++.-...|+.+.+|+++.||.|..+. |+.-|..++..|+.+....+++..++           +.|+++..+-
T Consensus       291 ~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~L-----------l~h~Fi~~ye  356 (391)
T KOG0983|consen  291 QYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKL-----------LEHPFIKRYE  356 (391)
T ss_pred             cCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHH-----------hcCcceeecc
Confidence            35566556789999999999999988755 99999999999999998888766654           5777766553

>KOG1266|consensus

Probab=96.32  E-value=0.0036  Score=43.96  Aligned_cols=52  Identities=19%  Similarity=0.282  Sum_probs=38.9

Q ss_pred             HhcCCCceeeeeeeEEeC-----CeEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhhh
Q psy14717         72 HECNFAHIVGFYGAFISD-----QDISICMEYMDGGSLDLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus        72 ~~~~h~~iv~~~~~~~~~-----~~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~~  123 (125)
                      -.+-|.|+++++.+|.+.     ..+.+++|||..|++..+|++-    ..+.....++|+
T Consensus       122 lqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~  182 (458)
T KOG1266|consen  122 LQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWC  182 (458)
T ss_pred             HHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHH
Confidence            345799999999888764     3478899999999999999864    245555555554

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=96.10  E-value=0.0022  Score=41.32  Aligned_cols=41  Identities=20%  Similarity=0.145  Sum_probs=28.5

Q ss_pred             HHHHHHHHHhcCCCc--eeeeeeeEEeCCeEEEEEEecCCCCHHHHH
Q psy14717         64 ATTILKVLHECNFAH--IVGFYGAFISDQDISICMEYMDGGSLDLIL  108 (125)
Q Consensus        64 ~~~e~~~~~~~~h~~--iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l  108 (125)
                      ..+|+.++..+.|++  +...+    .....+++|||+++++|....
T Consensus        80 ~~~E~~~l~~l~~~~i~v~~~~----~~~~~~lv~e~~~g~~L~~~~  122 (198)
T cd05144          80 AQKEFAALKALYEEGFPVPKPI----DWNRHAVVMEYIDGVELYRVR  122 (198)
T ss_pred             HHHHHHHHHHHHHcCCCCCcee----ecCCceEEEEEeCCcchhhcc
Confidence            456888888887764  33333    234568999999999987754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0665|consensus

Probab=95.88  E-value=0.0031  Score=43.79  Aligned_cols=48  Identities=23%  Similarity=0.383  Sum_probs=40.9

Q ss_pred             hhHHHHHHHHHhcCCCceeeeeeeEEeCC------eEEEEEEecCCCCHHHHHHH
Q psy14717         62 LSATTILKVLHECNFAHIVGFYGAFISDQ------DISICMEYMDGGSLDLILKK  110 (125)
Q Consensus        62 ~~~~~e~~~~~~~~h~~iv~~~~~~~~~~------~~~iv~e~~~~GsL~~~l~~  110 (125)
                      .+..+|..++..++|+|+++++.+|....      .+|++||+|.. +|...+..
T Consensus        60 kra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~-nl~~vi~~  113 (369)
T KOG0665|consen   60 KRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDA-NLCQVILM  113 (369)
T ss_pred             hhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhh-HHHHHHHH
Confidence            35678999999999999999999997643      49999999999 88887764

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=95.75  E-value=0.037  Score=36.99  Aligned_cols=58  Identities=17%  Similarity=0.177  Sum_probs=40.0

Q ss_pred             hHHHHHHHHHhcCCCce--eeeeeeEEeC-C---eEEEEEEecCC-CCHHHHHHHcCCCCHHHHhh
Q psy14717         63 SATTILKVLHECNFAHI--VGFYGAFISD-Q---DISICMEYMDG-GSLDLILKKAGKIPEHILGT  121 (125)
Q Consensus        63 ~~~~e~~~~~~~~h~~i--v~~~~~~~~~-~---~~~iv~e~~~~-GsL~~~l~~~~~l~~~~~~~  121 (125)
                      ...+|+.++..+.|+++  +..++..... .   ..+++||++++ ++|.+++.. ..+++..+..
T Consensus        86 r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~~~~  150 (239)
T PRK01723         86 RAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQE-APLSEEQWQA  150 (239)
T ss_pred             HHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHHHHH
Confidence            46689999999988775  4555543322 2   23599999997 699998876 4567665443

>KOG0201|consensus

Probab=95.20  E-value=0.023  Score=41.04  Aligned_cols=55  Identities=35%  Similarity=0.630  Sum_probs=48.2

Q ss_pred             CCCCCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHhh
Q psy14717          7 SGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL   62 (125)
Q Consensus         7 ~~~~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~~   62 (125)
                      -|.|+......++++..|.++.||.+. |.|+..++.++..|+.+.+..|+..+.+
T Consensus       206 ~GePP~s~~hPmrvlflIpk~~PP~L~-~~~S~~~kEFV~~CL~k~P~~RpsA~~L  260 (467)
T KOG0201|consen  206 KGEPPHSKLHPMRVLFLIPKSAPPRLD-GDFSPPFKEFVEACLDKNPEFRPSAKEL  260 (467)
T ss_pred             cCCCCCcccCcceEEEeccCCCCCccc-cccCHHHHHHHHHHhhcCcccCcCHHHH
Confidence            467777888899999999999999986 5999999999999999999988877654

>KOG1166|consensus

Probab=95.00  E-value=0.0016  Score=51.18  Aligned_cols=46  Identities=15%  Similarity=0.163  Sum_probs=35.7

Q ss_pred             CceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         77 AHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        77 ~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      +.+.++...+...+...+++||.+.|||.++++..+.+++-.+.++
T Consensus       754 ~~~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~  799 (974)
T KOG1166|consen  754 PSIMHISSAHVFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFF  799 (974)
T ss_pred             cchHHHHHHHccCCcceeeeeccccccHHHhhccCCCCCchhhhHH
Confidence            3455666666777888999999999999999997777777655444

>KOG0578|consensus

Probab=94.93  E-value=0.069  Score=39.67  Aligned_cols=56  Identities=29%  Similarity=0.412  Sum_probs=47.6

Q ss_pred             CCCCCCCCchHHHHHHHhhcCCCCCCCC-CCchhHHHHHHHHHhhcCCCccccHHhh
Q psy14717          7 SGSNVPRPMAIFELLDYIVNEPPPKLPA-GIFTDSFRDFVDRCLKKNPSERADLKTL   62 (125)
Q Consensus         7 ~~~~~~~~~~~~~~~~~i~~~~~~~lg~-g~fg~v~~~~~~~~~~~~~~~~~~~~~~   62 (125)
                      .|.|+......++.+..|..++.|.|.. +.-+.+++.|...|+..++.+|.+...+
T Consensus       464 eGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eL  520 (550)
T KOG0578|consen  464 EGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKEL  520 (550)
T ss_pred             cCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHH
Confidence            3566666678999999999999999875 7789999999999999999988877765

>KOG0670|consensus

Probab=94.92  E-value=0.0031  Score=46.67  Aligned_cols=76  Identities=20%  Similarity=0.316  Sum_probs=54.6

Q ss_pred             CCCCCchhHHHHHHHH-----HhhcCCCccccHHhh--hHHHHHHHHHhcC------CCceeeeeeeEEeCCeEEEEEEe
Q psy14717         32 LPAGIFTDSFRDFVDR-----CLKKNPSERADLKTL--SATTILKVLHECN------FAHIVGFYGAFISDQDISICMEY   98 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~--~~~~e~~~~~~~~------h~~iv~~~~~~~~~~~~~iv~e~   98 (125)
                      .|.|-|+.|..+...+     +++.+...    +.+  .-+.|++++..++      -.+++.++..|...+++|+|.|-
T Consensus       440 ~GkGvFs~Vvra~D~~r~~~vAiKIIRnN----E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~  515 (752)
T KOG0670|consen  440 TGKGVFSTVVRARDQARGQEVAIKIIRNN----EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEP  515 (752)
T ss_pred             cccceeeeeeeccccCCCCeeEEEEeecc----hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehh
Confidence            4889999988865532     12111111    111  2247999999875      35789999999999999999998


Q ss_pred             cCCCCHHHHHHHcC
Q psy14717         99 MDGGSLDLILKKAG  112 (125)
Q Consensus        99 ~~~GsL~~~l~~~~  112 (125)
                      +.- +|.+.|+..+
T Consensus       516 Lsl-NLRevLKKyG  528 (752)
T KOG0670|consen  516 LSL-NLREVLKKYG  528 (752)
T ss_pred             hhc-hHHHHHHHhC
Confidence            888 9999999874

>KOG1023|consensus

Probab=94.61  E-value=0.03  Score=41.28  Aligned_cols=40  Identities=25%  Similarity=0.396  Sum_probs=37.0

Q ss_pred             HhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         72 HECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        72 ~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      +.+.|.|+.++.+.+.++....++-+||..|+|.+.+...
T Consensus         2 ~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~   41 (484)
T KOG1023|consen    2 RQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE   41 (484)
T ss_pred             cccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc
Confidence            4578999999999999999999999999999999999873

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=93.35  E-value=0.015  Score=37.57  Aligned_cols=46  Identities=17%  Similarity=0.065  Sum_probs=31.8

Q ss_pred             hHHHHHHHHHhcCCC--ceeeeeeeEEeC---CeEEEEEEecCCCCHHHHH
Q psy14717         63 SATTILKVLHECNFA--HIVGFYGAFISD---QDISICMEYMDGGSLDLIL  108 (125)
Q Consensus        63 ~~~~e~~~~~~~~h~--~iv~~~~~~~~~---~~~~iv~e~~~~GsL~~~l  108 (125)
                      .+.+|..++..+.+.  ++..++......   +..+++|||++|+++.+.+
T Consensus        41 ~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~   91 (223)
T cd05154          41 DVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRL   91 (223)
T ss_pred             cHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCC
Confidence            456788888887653  345555544443   2568999999999887654

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=93.30  E-value=0.0059  Score=45.50  Aligned_cols=32  Identities=13%  Similarity=0.101  Sum_probs=20.8

Q ss_pred             CCceeeeeeeEEe-CCeEEEEEEecCCCCHHHH
Q psy14717         76 FAHIVGFYGAFIS-DQDISICMEYMDGGSLDLI  107 (125)
Q Consensus        76 h~~iv~~~~~~~~-~~~~~iv~e~~~~GsL~~~  107 (125)
                      +.+.+.+..++.+ ...-.|+|||+.|+.+.++
T Consensus       219 ~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~  251 (537)
T PRK04750        219 DSDMLYVPEVYWDYCSETVMVMERMYGIPVSDV  251 (537)
T ss_pred             CCCCeecceeecccCCCceEEEeeecCccHHhH
Confidence            4444444444432 3345799999999999874

>KOG3741|consensus

Probab=93.30  E-value=0.1  Score=39.04  Aligned_cols=43  Identities=14%  Similarity=0.354  Sum_probs=35.4

Q ss_pred             HHHHHHHhcCCCceeeeeeeEEe----CCeEEEEEEecCC-CCHHHHH
Q psy14717         66 TILKVLHECNFAHIVGFYGAFIS----DQDISICMEYMDG-GSLDLIL  108 (125)
Q Consensus        66 ~e~~~~~~~~h~~iv~~~~~~~~----~~~~~iv~e~~~~-GsL~~~l  108 (125)
                      .-++.++++.|+|+|++.++|..    +..+.+|.+|.|+ ++|.++-
T Consensus       322 ~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~  369 (655)
T KOG3741|consen  322 SLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY  369 (655)
T ss_pred             HHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence            34678889999999999999984    3469999999998 7887754

>KOG0576|consensus

Probab=93.01  E-value=0.21  Score=38.39  Aligned_cols=90  Identities=22%  Similarity=0.382  Sum_probs=64.2

Q ss_pred             CCchHHHHHHHhhcC--CCCCCC-CCCchhHHHHHHHHHhhcCCCccccHHhh----------hHHHHHHHHHhcCCCc-
Q psy14717         13 RPMAIFELLDYIVNE--PPPKLP-AGIFTDSFRDFVDRCLKKNPSERADLKTL----------SATTILKVLHECNFAH-   78 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~--~~~~lg-~g~fg~v~~~~~~~~~~~~~~~~~~~~~~----------~~~~e~~~~~~~~h~~-   78 (125)
                      .+...++.+....+-  .+|++- .+.++..|-.++..++.+.+++|....++          ...-+++++.+++||| 
T Consensus       216 fdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n~P~~  295 (829)
T KOG0576|consen  216 FDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVNNPNP  295 (829)
T ss_pred             cccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHHHHccCCCC
Confidence            334466666655554  334443 47778888777777777777777665543          2334778899999999 


Q ss_pred             eeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         79 IVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        79 iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      .+..++.+..+...||.++++.+|
T Consensus       296 ~v~~~~d~~~E~~~~i~~~i~s~~  319 (829)
T KOG0576|consen  296 VVRYLEDYDGEDYLWIPMRICSTG  319 (829)
T ss_pred             cccccccCCcccccchhhhhhcCC
Confidence            777777777788899999999998

>KOG0574|consensus

Probab=92.08  E-value=0.074  Score=37.21  Aligned_cols=54  Identities=26%  Similarity=0.507  Sum_probs=44.0

Q ss_pred             CCCCCCCCCchHHHHHHHhhcCCCCCCCC-CCchhHHHHHHHHHhhcCCCccccH
Q psy14717          6 GSGSNVPRPMAIFELLDYIVNEPPPKLPA-GIFTDSFRDFVDRCLKKNPSERADL   59 (125)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~i~~~~~~~lg~-g~fg~v~~~~~~~~~~~~~~~~~~~   59 (125)
                      +.|.|+..+..+++.+-.|..++||++-. .-++.-|..++..|+.+.+.++...
T Consensus       223 AEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA  277 (502)
T KOG0574|consen  223 AEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTA  277 (502)
T ss_pred             hcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHH
Confidence            56788888999999999999999999875 5678888888888888777765443

>KOG1243|consensus

Probab=91.10  E-value=0.18  Score=38.52  Aligned_cols=44  Identities=16%  Similarity=0.284  Sum_probs=35.6

Q ss_pred             HHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHH
Q psy14717         65 TTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK  110 (125)
Q Consensus        65 ~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~  110 (125)
                      .+-++-++.++||||+++++.+.....+||++|-+..  |..++++
T Consensus        57 ~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~P--l~~~lk~  100 (690)
T KOG1243|consen   57 KRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRP--LETVLKE  100 (690)
T ss_pred             HHHHHHhhhccCchhhhhhhhhcccCceEEEeecccc--HHHHHHH
Confidence            3456667789999999999999999999999998876  4444444

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=90.69  E-value=0.069  Score=34.51  Aligned_cols=74  Identities=16%  Similarity=0.007  Sum_probs=44.8

Q ss_pred             CCCCchhHHHHHHHHHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHH
Q psy14717         33 PAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILK  109 (125)
Q Consensus        33 g~g~fg~v~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~  109 (125)
                      +.|++|.||.+.+...-.....++....+..+..|.+++..++..++.+=... ...  ..+.|||..|-+|.+.-.
T Consensus        31 ~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~-yg~--~~i~me~i~G~~L~~~~~  104 (201)
T COG2112          31 AKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYF-YGE--DFIRMEYIDGRPLGKLEI  104 (201)
T ss_pred             hcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEE-ech--hhhhhhhhcCcchhhhhh
Confidence            89999999987664211111223333444466778888887765555443322 222  245699999988777544

>KOG0590|consensus

Probab=89.26  E-value=0.06  Score=40.88  Aligned_cols=89  Identities=17%  Similarity=0.142  Sum_probs=58.3

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH------HHhhcCCCcc-ccHHhhhHHHHHHHHHhcC-CCceeeeeeeE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD------RCLKKNPSER-ADLKTLSATTILKVLHECN-FAHIVGFYGAF   86 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~------~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~-h~~iv~~~~~~   86 (125)
                      ...|...+.+        |.|+|+.+-.....      .+.+...... ..........|..+-..+. |.|++.+++..
T Consensus        19 ~~~~~~~~~i--------g~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~   90 (601)
T KOG0590|consen   19 NSQYKLSRSI--------GKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPS   90 (601)
T ss_pred             cccccccccc--------cccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCcc
Confidence            4466666677        99999988875431      0111111110 0011112334555555555 99999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHH-HHc
Q psy14717         87 ISDQDISICMEYMDGGSLDLIL-KKA  111 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l-~~~  111 (125)
                      ..++..++++++..+|++.+.+ ...
T Consensus        91 ~~~~~~~~~~~~s~g~~~f~~i~~~~  116 (601)
T KOG0590|consen   91 SSPRSYLLSLSYSDGGSLFSKISHPD  116 (601)
T ss_pred             CCCcccccccCcccccccccccccCC
Confidence            9999999999999999999988 443

>KOG0590|consensus

Probab=89.07  E-value=0.036  Score=42.00  Aligned_cols=51  Identities=18%  Similarity=0.146  Sum_probs=38.5

Q ss_pred             HHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCC
Q psy14717         64 ATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIP  115 (125)
Q Consensus        64 ~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~  115 (125)
                      +..|+-+-+.+.|+|++.....+.......-.||||++ +|+.++...+.+.
T Consensus       368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~~~~  418 (601)
T KOG0590|consen  368 ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNGKLT  418 (601)
T ss_pred             hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcccccc
Confidence            45666667778999998887777665554445999999 9999998854444

>KOG0579|consensus

Probab=88.29  E-value=1.5  Score=34.15  Aligned_cols=56  Identities=29%  Similarity=0.466  Sum_probs=44.4

Q ss_pred             CCCCCCCCCchHHHHHHHhhcCCCCCCCC-CCchhHHHHHHHHHhhcCCCccccHHh
Q psy14717          6 GSGSNVPRPMAIFELLDYIVNEPPPKLPA-GIFTDSFRDFVDRCLKKNPSERADLKT   61 (125)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~i~~~~~~~lg~-g~fg~v~~~~~~~~~~~~~~~~~~~~~   61 (125)
                      +.+.|+....+.++++-+|.+-.||+|-. ..++..|+.+...|+.+.+..++....
T Consensus       229 AqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaq  285 (1187)
T KOG0579|consen  229 AQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQ  285 (1187)
T ss_pred             hccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHH
Confidence            34566777778999999999998888765 678899999998899888877665543

>KOG0601|consensus

Probab=88.08  E-value=0.22  Score=37.15  Aligned_cols=94  Identities=15%  Similarity=0.086  Sum_probs=60.4

Q ss_pred             CCCCCCCC--CCchhHHHHHHH-------HHhhcCCC-ccccHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEE
Q psy14717         27 EPPPKLPA--GIFTDSFRDFVD-------RCLKKNPS-ERADLKTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISIC   95 (125)
Q Consensus        27 ~~~~~lg~--g~fg~v~~~~~~-------~~~~~~~~-~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv   95 (125)
                      +....+|.  |.+|.+|.....       .+.++... ........+..+|+...+.+ .|.+.+..+..|......++-
T Consensus       117 ~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiq  196 (524)
T KOG0601|consen  117 PISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQ  196 (524)
T ss_pred             ccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceee
Confidence            33444588  999999975431       11111111 11112222445676666665 599999999999999999999


Q ss_pred             EEecCCCCHHHHHHHcCC-CCHHHHhh
Q psy14717         96 MEYMDGGSLDLILKKAGK-IPEHILGT  121 (125)
Q Consensus        96 ~e~~~~GsL~~~l~~~~~-l~~~~~~~  121 (125)
                      +|+|.. +|..+...... +++..++.
T Consensus       197 tE~~~~-sl~~~~~~~~~~~p~~~l~~  222 (524)
T KOG0601|consen  197 TELCGE-SLQSYCHTPCNFLPDNLLWN  222 (524)
T ss_pred             eccccc-hhHHhhhcccccCCchhhhh
Confidence            999996 99998876533 66665554

>cd05119 RIO RIO kinase family, catalytic domain

Probab=86.74  E-value=0.3  Score=30.83  Aligned_cols=14  Identities=14%  Similarity=0.256  Sum_probs=11.3

Q ss_pred             CCCCCCchhHHHHH
Q psy14717         31 KLPAGIFTDSFRDF   44 (125)
Q Consensus        31 ~lg~g~fg~v~~~~   44 (125)
                      .||+|+||.||++.
T Consensus         4 ~lg~G~~g~Vy~a~   17 (187)
T cd05119           4 PIGTGKEADVYLAL   17 (187)
T ss_pred             ccccccceeEEEEE
Confidence            35999999999754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=86.71  E-value=1.7  Score=28.38  Aligned_cols=49  Identities=20%  Similarity=0.167  Sum_probs=34.9

Q ss_pred             hHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         63 SATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        63 ~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      +..+|..++..+.-..+..-.=...+++.-.|+|||.+|-.|.+++...
T Consensus        45 Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~   93 (204)
T COG3642          45 RTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA   93 (204)
T ss_pred             HHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc
Confidence            4557999998865443333333445666678999999999988888774

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=85.11  E-value=3.5  Score=28.58  Aligned_cols=49  Identities=76%  Similarity=1.323  Sum_probs=38.6

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHhh
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL   62 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~~   62 (125)
                      ....++....+..+..+....+.+..-+..+...|+...+.+|.+....
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~el  298 (331)
T cd06649         250 AMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKML  298 (331)
T ss_pred             chhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHH
Confidence            3445677777878888887778888888888888999999988877654

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=82.15  E-value=2.2  Score=31.30  Aligned_cols=47  Identities=17%  Similarity=0.060  Sum_probs=28.8

Q ss_pred             HHHHHHHHHhc----CCCceeeeeeeEEe-CCeEEEEEEecCCCCHHHHHHH
Q psy14717         64 ATTILKVLHEC----NFAHIVGFYGAFIS-DQDISICMEYMDGGSLDLILKK  110 (125)
Q Consensus        64 ~~~e~~~~~~~----~h~~iv~~~~~~~~-~~~~~iv~e~~~~GsL~~~l~~  110 (125)
                      +.+|...+..+    .|.+-+.+...+.. ...-+++|||++|++|.++...
T Consensus       200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~  251 (437)
T TIGR01982       200 LRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAAL  251 (437)
T ss_pred             HHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHH
Confidence            44565555443    34444444444422 3346899999999999887653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1240|consensus

Probab=81.59  E-value=0.056  Score=43.66  Aligned_cols=79  Identities=14%  Similarity=0.082  Sum_probs=51.2

Q ss_pred             CCCCCCchhHHHHHHHHH---hh---cCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         31 KLPAGIFTDSFRDFVDRC---LK---KNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~~~---~~---~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      .||++.|=++.++.+..-   .+   +......-..-.+...|++ ....++||++++...-....-.|++.+|... +|
T Consensus        30 ~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvkh-nL  107 (1431)
T KOG1240|consen   30 NLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVKH-NL  107 (1431)
T ss_pred             ccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHhh-hh
Confidence            359999988888766421   11   1111111111112234555 4557999999999877777778999999999 99


Q ss_pred             HHHHHHc
Q psy14717        105 DLILKKA  111 (125)
Q Consensus       105 ~~~l~~~  111 (125)
                      +|.|.-+
T Consensus       108 yDRlSTR  114 (1431)
T KOG1240|consen  108 YDRLSTR  114 (1431)
T ss_pred             hhhhccc
Confidence            9988774

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	125
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		2e-20
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-20
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		3e-20
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		4e-20
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-20
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-20
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-20
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		5e-20
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		5e-20
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		5e-20
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		8e-19
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		5e-07
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		3e-04
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		6e-07
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		3e-04
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		1e-06
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		2e-04
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		2e-04
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-04
3a7f_A	303	Human Mst3 Kinase Length = 303		3e-04
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-04
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-04
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		3e-04
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		7e-04

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 117 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 174

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 82  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 139

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 74  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 131

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 93.2 bits (230), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 55  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 112

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 55  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 112

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 58  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 115

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 55  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 112

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 92.8 bits (229), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 55  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 112

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 92.8 bits (229), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 42/58 (72%), Positives = 50/58 (86%)
Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 55  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 112

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 92.4 bits (228), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/76 (59%), Positives = 57/76 (75%), Gaps = 2/76 (2%)
Query: 4   ISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLS 63
           +SG G +    MAIFELLDYIVNEPPPKLP G+FT  F++FV++CL KNP+ERADLK L+
Sbjct: 251 VSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLT 310
Query: 64  ATTILKV--LHECNFA 77
             T +K   + E +FA
Sbjct: 311 NHTFIKRSEVEEVDFA 326

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 88.6 bits (218), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 40/58 (68%), Positives = 49/58 (84%)
Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LK+A +IPE ILG ++ A
Sbjct: 65  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA 122

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 18  FELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFA 77
           F+ L  +V EP P+LPA  F+  F DF  +CLKKN  ER     L        LHE    
Sbjct: 264 FQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF-TLHESKGT 322
Query: 78  HIVGFYGAFISD 89
            +  F    + D
Sbjct: 323 DVASFVKLILGD 334

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 7/54 (12%)
Query: 73  ECNFAHIVGFYGAFISDQDISICMEYMDGGSLD----LILKKAGKIPEHILGTI 122
           +C F   V FYGA   + D+ ICME MD  SLD     ++ K   IPE ILG I
Sbjct: 108 DCPFT--VTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKI 158

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 18  FELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFA 77
           F+ L  +V EP P+LPA  F+  F DF  +CLKKN  ER     L        LHE    
Sbjct: 220 FQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFF-TLHESKGT 278
Query: 78  HIVGFYGAFISD 89
            +  F    + D
Sbjct: 279 DVASFVKLILGD 290

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 73  ECNFAHIVGFYGAFISDQDISICMEYMDGGSLD----LILKKAGKIPEHILGTIT 123
           +C F   V FYGA   + D+ ICME MD  SLD     ++ K   IPE ILG I 
Sbjct: 64  DCPFT--VTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIA 115

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 18  FELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFA 77
           F+ L  +V EP P+LPA  F+  F DF  +CLKKN  ER     L        LHE    
Sbjct: 247 FQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFF-TLHESKGT 305
Query: 78  HIVGF 82
            +  F
Sbjct: 306 DVASF 310

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 48  CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DL 106
            +K+ P E +DL+ +     + ++ +C+  H+V +YG++  + D+ I MEY   GS+ D+
Sbjct: 58  AIKQVPVE-SDLQEIIKE--ISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDI 114
Query: 107 ILKKAGKIPEHILGTITSA 125
           I  +   + E  + TI  +
Sbjct: 115 IRLRNKTLTEDEIATILQS 133

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 3   SISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
            + G  +N+  P  +F  L+        ++  G F + F+   +R  +    +  DL+  
Sbjct: 10  QVPGMQNNIADPEELFTKLE--------RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA 61
Query: 63  SATTI-----LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS-LDLILKKAGKIPE 116
                     + VL +C+ +++  +YG+++    + I MEY+ GGS LDL+  +AG   E
Sbjct: 62  EDEIEDIQQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL--RAGPFDE 119
Query: 117 HILGTI 122
             + T+
Sbjct: 120 FQIATM 125

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 49  LKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLIL 108
           ++++ ++  + + L    ++   H+C +  IV  +G FI++ D+ I ME M   +  L  
Sbjct: 58  MRRSGNKEENKRILMDLDVVLKSHDCPY--IVQCFGTFITNTDVFIAMELMGTCAEKLKK 115
Query: 109 KKAGKIPEHILGTITSA 125
           +  G IPE ILG +T A
Sbjct: 116 RMQGPIPERILGKMTVA 132

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 70  VLHECNFAHIVGFYGAFISDQDISICMEYMDGGS-LDLILKKAGKIPEHILGTI 122
           VL +C+  ++  +YG+++ D  + I MEY+ GGS LDL+  + G + E  + TI
Sbjct: 73  VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATI 124

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 70  VLHECNFAHIVGFYGAFISDQDISICMEYMDGGS-LDLILKKAGKIPEHILGTI 122
           VL +C+  ++  +YG+++ D  + I MEY+ GGS LDL+  + G + E  + TI
Sbjct: 58  VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATI 109

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 70  VLHECNFAHIVGFYGAFISDQDISICMEYMDGGS-LDLILKKAGKIPEHILGTI 122
           VL +C+  ++  +YG+++ D  + I MEY+ GGS LDL+  + G + E  + TI
Sbjct: 58  VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATI 109

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 31  KLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTI-----LKVLHECNFAHIVGFYGA 85
           K+  G F + F+   +R  K    +  DL+            + VL +C+  ++  +YG+
Sbjct: 34  KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 93
Query: 86  FISDQDISICMEYMDGGS-LDLILKKAGKIPEHILGTI 122
           ++ D  + I MEY+ GGS LDL+  + G + E  + TI
Sbjct: 94  YLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATI 129

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 38.9 bits (89), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS-LDLILKKAGKIPEHILGTI 122
           + VL +C+  +I  ++G+++    + I MEY+ GGS LDL+  K G + E  + TI
Sbjct: 68  ITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATI 121

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	125
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	6e-26
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	3e-17
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-20
2dyl_A	318	Dual specificity mitogen-activated protein kinase	5e-15
3an0_A	340	Dual specificity mitogen-activated protein kinase;	7e-19
3an0_A	340	Dual specificity mitogen-activated protein kinase;	4e-17
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-18
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-16
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-17
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-14
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	4e-11
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-09
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-11
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-07
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	6e-11
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-08
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	9e-11
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	6e-08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-10
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-08
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-09
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	6e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-09
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	9e-06
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-09
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	4e-07
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-09
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-09
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-07
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	7e-09
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	8e-06
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-08
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	3e-08
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	5e-06
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-07
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-06
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-07
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-05
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	8e-07
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-06
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	4e-06
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	5e-06
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	5e-06
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	7e-06
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	9e-06
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-04
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-05
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-05
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	7e-04
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-05
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	5e-05
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	8e-05
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	9e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-04
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-04
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-04
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-04
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-04
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-04
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	3e-04
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-04
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	3e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-04
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-04
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	4e-04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	4e-04
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	4e-04
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	4e-04
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	4e-04
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	4e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	5e-04
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	6e-04
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	6e-04
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	8e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	9e-04
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	9e-04

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 98.4 bits (245), Expect = 6e-26
 Identities = 42/58 (72%), Positives = 50/58 (86%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++ A
Sbjct: 82  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA 139

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 74.9 bits (184), Expect = 3e-17
 Identities = 39/61 (63%), Positives = 49/61 (80%)

Query: 2   DSISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKT 61
             ++  G +   PMAIFELLDYIVNEPPPKLP+G+F+  F+DFV++CL KNP+ERADLK 
Sbjct: 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQ 321

Query: 62  L 62
           L
Sbjct: 322 L 322

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 83.2 bits (206), Expect = 2e-20
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 68  LKVLH-ECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTITSA 125
           L V+    +  +IV  +G FI++ D+ I ME M   +  L  +  G IPE ILG +T A
Sbjct: 74  LDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVA 132

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 68.5 bits (168), Expect = 5e-15
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 12  PRPMAIFELLDYIVNEPPPKLPAGI-FTDSFRDFVDRCLKKNPSERADLKTL 62
                 FE+L  ++ E PP LP  + F+  F+ FV  CL K+  +R     L
Sbjct: 230 KNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKL 281

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 78.1 bits (193), Expect = 1e-18
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 70  VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL---ILKKAGKIPEHILGTITSA 125
            +   +    V FYGA   + D+ ICME MD         ++ K   IPE ILG I  +
Sbjct: 59  SMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVS 117

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 72.3 bits (178), Expect = 2e-16
 Identities = 21/51 (41%), Positives = 26/51 (50%)

Query: 12  PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
                 F+ L  +V EP P+LPA  F+  F DF  +CLKKN  ER     L
Sbjct: 214 DSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 264

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 75.4 bits (186), Expect = 2e-17
 Identities = 25/61 (40%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 70  VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA-----GKIPEHILGTITS 124
           V+   +  +IV FYGA   + D  ICME M   S D   K         IPE ILG IT 
Sbjct: 74  VMRSSDCPYIVQFYGALFREGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITL 132

Query: 125 A 125
           A
Sbjct: 133 A 133

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 67.7 bits (166), Expect = 1e-14
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)

Query: 12  PRPMAIFELLDYIVNEPPPKLPAG---IFTDSFRDFVDRCLKKNPSERADLKTL 62
           P+  ++F+ L  +V   PP+L       F+ SF +FV+ CL K+ S+R   K L
Sbjct: 230 PKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL 283

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 57.4 bits (139), Expect = 4e-11
 Identities = 10/55 (18%), Positives = 24/55 (43%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT 123
           + L +    + + + G ++ +    + MEY  G + DL+      + E  +  +T
Sbjct: 106 RFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVT 160

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 53.2 bits (128), Expect = 1e-09
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 10/57 (17%)

Query: 14  PM-AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
            M A++     I     P L +G +++ FR+FVD CL+K P +R      ++  +LK
Sbjct: 258 AMSALYH----IAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRP-----TSEVLLK 305

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 57.4 bits (139), Expect = 5e-11
 Identities = 17/56 (30%), Positives = 26/56 (46%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT 123
           L      +   IV  YGA      ++I ME ++GGSL  ++K+ G +PE       
Sbjct: 101 LVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYL 156

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 47.4 bits (113), Expect = 1e-07
 Identities = 13/62 (20%), Positives = 19/62 (30%), Gaps = 10/62 (16%)

Query: 9   SNVPRPMAIFELLDYIVNEPPPKLP-AGIFTDSFRDFVDRCLKKNPSERADLKTLSATTI 67
           +   R          I +EPPP               +   L+K P  RA     SA  +
Sbjct: 257 TQYFRGPLCL----KIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRA-----SAMEL 307

Query: 68  LK 69
            +
Sbjct: 308 RR 309

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 56.9 bits (138), Expect = 6e-11
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 70  VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHILGTI 122
           +L  C+  +IV   GA+  D  + I +E+  GG++  ++L+    + E  +  +
Sbjct: 69  ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVV 122

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 49.6 bits (119), Expect = 2e-08
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 11/58 (18%)

Query: 14  PM-AIFELLDYIVNEPPPKLPA-GIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           PM  + +    I    PP L     ++  FRDF+   L KNP  R      SA  +L+
Sbjct: 227 PMRVLLK----IAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRP-----SAAQLLE 275

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 56.6 bits (137), Expect = 9e-11
 Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 70  VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHILGTIT 123
           ++ +C+  H+V +YG++  + D+ I MEY   GS+ D+I  +   + E  + TI 
Sbjct: 77  IMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATIL 131

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 48.5 bits (116), Expect = 6e-08
 Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 6/51 (11%)

Query: 14  PM-AIFELLDYIVNEPPPKLP-AGIFTDSFRDFVDRCLKKNPSERADLKTL 62
           PM AIF     I   PPP      +++D+F DFV +CL K+P +RA    L
Sbjct: 230 PMRAIFM----IPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQL 276

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 54.6 bits (132), Expect = 4e-10
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 3/55 (5%)

Query: 70  VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHILGTIT 123
           VL +C+  ++  +YG+++ D  + I MEY+ GGS  DL+  + G + E  + TI 
Sbjct: 73  VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATIL 125

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 11/57 (19%)

Query: 14  PM-AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           PM  +F     I    PP L  G ++   ++FV+ CL K PS R      +A  +LK
Sbjct: 224 PMKVLFL----IPKNNPPTLE-GNYSKPLKEFVEACLNKEPSFRP-----TAKELLK 270

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 53.5 bits (129), Expect = 1e-09
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 10/57 (17%)

Query: 14  PM-AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           PM A+F     I   P P+L +  ++  F+ F++ CL KN S+R      +   ++K
Sbjct: 239 PMRALFL----IPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRP-----ATEQLMK 286

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 45.4 bits (108), Expect = 6e-07
 Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 8/58 (13%)

Query: 74  CNFAHIVGFYGAFI------SDQDISICMEYMDGGSLDLILK--KAGKIPEHILGTIT 123
            +  +I  +YGAFI       D  + + ME+   GS+  ++K  K   + E  +  I 
Sbjct: 78  SHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC 135

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 53.4 bits (128), Expect = 1e-09
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILK--KAGKIPEHILGTI 122
            V    N  +IV +   FI+D ++ +   +M  GS   ++       + E  +  I
Sbjct: 78  HVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI 133

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 42.2 bits (99), Expect = 9e-06
 Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 5/69 (7%)

Query: 1   MDSISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLK 60
           M       ++                + P       F+  F  FV++CL++NP  R    
Sbjct: 270 MSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARP--- 326

Query: 61  TLSATTILK 69
             SA+T+L 
Sbjct: 327 --SASTLLN 333

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 52.4 bits (126), Expect = 2e-09
 Identities = 10/54 (18%), Positives = 31/54 (57%), Gaps = 3/54 (5%)

Query: 70  VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHILGTI 122
           ++ +    ++V  Y +++  +++ + ME++ GG+L D++     ++ E  + T+
Sbjct: 95  IMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV--SQVRLNEEQIATV 146

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 46.2 bits (110), Expect = 4e-07
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 6/51 (11%)

Query: 14  PM-AIFELLDYIVNEPPPKLP-AGIFTDSFRDFVDRCLKKNPSERADLKTL 62
           P+ A+      + + PPPKL  +   +   RDF++R L ++P ERA  + L
Sbjct: 246 PVQAMK----RLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQEL 292

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 52.3 bits (126), Expect = 3e-09
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHILGTI 122
            V+ E    +IV +  +++   ++ + MEY+ GGSL D++      + E  +  +
Sbjct: 69  LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV--TETCMDEGQIAAV 121

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 46.1 bits (110), Expect = 4e-07
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 6/51 (11%)

Query: 14  PM-AIFELLDYIVNEPPPKLP-AGIFTDSFRDFVDRCLKKNPSERADLKTL 62
           P+ A++     I     P+L      +  FRDF++RCL+ +  +R   K L
Sbjct: 221 PLRALY----LIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKEL 267

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 51.9 bits (125), Expect = 4e-09
 Identities = 14/55 (25%), Positives = 30/55 (54%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT 123
           + + +C+  +IV +Y +F+   ++ + M+ + GGS+  I+K      EH  G + 
Sbjct: 65  QAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD 119

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 46.9 bits (112), Expect = 2e-07
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 13/54 (24%)

Query: 24  IVNEPPPKLPAGI--------FTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
            +   PP L  G+        +  SFR  +  CL+K+P +R      +A  +L+
Sbjct: 239 TLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRP-----TAAELLR 287

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 51.2 bits (123), Expect = 7e-09
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 67  ILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHI 118
              VL     +H+V ++ A+  D  + I  EY +GGSL   + +  +I  + 
Sbjct: 63  AHAVL--GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYF 112

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 42.3 bits (100), Expect = 8e-06
 Identities = 9/46 (19%), Positives = 19/46 (41%), Gaps = 6/46 (13%)

Query: 24  IVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           I     P++P  + +  F + +   +  +P  R      SA  ++K
Sbjct: 240 IRQGRLPRIP-QVLSQEFTELLKVMIHPDPERRP-----SAMALVK 279

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 50.8 bits (122), Expect = 1e-08
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 5/71 (7%)

Query: 49  LKKNPSERADLKTLSATTILKVL-HECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI 107
           +      +A    +    +LK L H     +++ +Y +FI D +++I +E  D G L  +
Sbjct: 67  IFDLMDAKARADCIKEIDLLKQLNHP----NVIKYYASFIEDNELNIVLELADAGDLSRM 122

Query: 108 LKKAGKIPEHI 118
           +K   K    I
Sbjct: 123 IKHFKKQKRLI 133

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 49.6 bits (119), Expect = 3e-08
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 5/57 (8%)

Query: 14  PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKV 70
            M ++ L   I     P LP+  +++  R  V+ C+  +P +R        T +  V
Sbjct: 240 KMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRP-----DVTYVYDV 291

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 49.3 bits (118), Expect = 3e-08
 Identities = 12/51 (23%), Positives = 20/51 (39%), Gaps = 2/51 (3%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGK--IPEH 117
            VL      +IV +  +F  +  + I M+Y +GG L   +         E 
Sbjct: 75  AVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQED 125

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 42.8 bits (101), Expect = 5e-06
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 6/53 (11%)

Query: 17  IFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           +  L+  I++   P +    ++   R  V +  K+NP +R      S  +IL+
Sbjct: 230 MKNLVLKIISGSFPPVSLH-YSYDLRSLVSQLFKRNPRDR-----PSVNSILE 276

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIP--EHILGTIT 123
            +       +IV + G+F  +  I I ME + GGSL  L+  K G +   E  +G  T
Sbjct: 71  ALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 128

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 44.2 bits (105), Expect = 2e-06
 Identities = 11/55 (20%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 9   SNVPRPM-AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
             +  P  A+F++    + +  P++P  + +   + F+ +C + +P +RA    L
Sbjct: 226 YELGEPQAAMFKVG---MFKVHPEIPESM-SAEAKAFILKCFEPDPDKRACANDL 276

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 47.7 bits (114), Expect = 1e-07
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 4/59 (6%)

Query: 69  KVLHECNFAHIVGFYGAFI----SDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT 123
           ++L      +IV FY ++       + I +  E M  G+L   LK+   +   +L +  
Sbjct: 77  EMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWC 135

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 8/61 (13%)

Query: 9   SNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTIL 68
           S       I+     + +   P     +     ++ ++ C+++N  ER      S   +L
Sbjct: 230 SECQNAAQIYRR---VTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERY-----SIKDLL 281

Query: 69  K 69
            
Sbjct: 282 N 282

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 45.4 bits (108), Expect = 8e-07
 Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 67  ILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHIL 119
           +++ L   N   ++ F G    D+ ++   EY+ GG+L  +I     + P    
Sbjct: 60  VMRCLEHPN---VLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQR 110

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 44.6 bits (106), Expect = 1e-06
 Identities = 7/76 (9%), Positives = 17/76 (22%), Gaps = 6/76 (7%)

Query: 50  KKNPSERADLKTLSATTILKVL--HECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI 107
                 +   + L+     + +  H       V    A+     + +  E          
Sbjct: 92  SPFRGPKDRARKLAEVGSHEKVGQHP----CCVRLEQAWEEGGILYLQTELCGPSLQQHC 147

Query: 108 LKKAGKIPEHILGTIT 123
                 +PE  +    
Sbjct: 148 EAWGASLPEAQVWGYL 163

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 40.4 bits (95), Expect = 4e-05
 Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 6/41 (14%)

Query: 29  PPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           PP+  AG  +   R  +   L+ +P  R      +A  +L 
Sbjct: 270 PPEFTAG-LSSELRSVLVMMLEPDPKLR-----ATAEALLA 304

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 43.6 bits (103), Expect = 3e-06
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 4/52 (7%)

Query: 67  ILKVL-HECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEH 117
            L  L    +   I+  Y   I+DQ I + ME      L+  LKK   I   
Sbjct: 107 YLNKLQQHSD--KIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPW 155

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 43.2 bits (102), Expect = 4e-06
 Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 4/51 (7%)

Query: 67  ILKVL-HECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
            L  L    +   I+  Y   I+DQ I + ME      L+  LKK   I  
Sbjct: 60  YLNKLQQHSD--KIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDP 107

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 43.1 bits (102), Expect = 5e-06
 Identities = 9/55 (16%), Positives = 19/55 (34%), Gaps = 4/55 (7%)

Query: 66  TILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHIL 119
              +     N   +V F GA +S   ++I      G +L  ++      +  +  
Sbjct: 81  MAYRQTRHEN---VVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKT 132

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 43.1 bits (102), Expect = 5e-06
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
           L+ L   N  +IV  YGA      + + MEY +GGSL  +L  A  +P 
Sbjct: 52  LRQLSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPY 98

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 42.7 bits (101), Expect = 7e-06
 Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 4/52 (7%)

Query: 67  ILKVL-HECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEH 117
            L  L    +   I+  Y   I+DQ I + ME      L+  LKK   I   
Sbjct: 79  YLNKLQQHSD--KIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKKKSIDPW 127

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 42.3 bits (100), Expect = 9e-06
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 66  TILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHIL 119
            +  +L   N   I+   G  + + ++ + ME+  GG L+ +L    +IP  IL
Sbjct: 58  KLFAMLKHPN---IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDIL 107

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 78  HIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
           H+VGF+G F  +  + + +E     SL  + K+   + E
Sbjct: 102 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTE 140

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISIC--MEYMDGGSLDLILKKAGKIPEHI 118
            +L E    +IV +Y   I   + ++   MEY +GG L  ++ K  K  +++
Sbjct: 57  NLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 6/53 (11%)

Query: 17  IFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
             EL   I      ++P   ++D   + + R L      R      S   IL+
Sbjct: 221 QKELAGKIREGKFRRIPYR-YSDELNEIITRMLNLKDYHR-----PSVEEILE 267

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 11/39 (28%), Positives = 20/39 (51%)

Query: 78  HIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE 116
           H+VGF+G F  +  + + +E     SL  + K+   + E
Sbjct: 76  HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTE 114

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 41.5 bits (98), Expect = 2e-05
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 66  TILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIP 115
            I+K L   N   IV F GA     ++SI  EY+  GSL  L+ K   +  
Sbjct: 86  AIMKRLRHPN---IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQ 133

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 41.1 bits (97), Expect = 2e-05
 Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 5/55 (9%)

Query: 66  TILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHIL 119
            +L+     N   I+ F G   +   ++I  ++ +G SL   +     K     L
Sbjct: 72  GVLRKTRHVN---ILLFMGY-STAPQLAIVTQWCEGSSLYHHLHASETKFEMKKL 122

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 40.4 bits (95), Expect = 3e-05
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 14/62 (22%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDIS-------------ICMEYMDGGSL-DLILKKAGKI 114
            +L   N  ++V +Y A++  ++               I MEY + G+L DLI  +    
Sbjct: 54  MLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQ 113

Query: 115 PE 116
             
Sbjct: 114 QR 115

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 36.9 bits (86), Expect = 7e-04
 Identities = 10/55 (18%), Positives = 20/55 (36%), Gaps = 6/55 (10%)

Query: 15  MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           + I + L  +  E PP           +  +   +  +P++R       A T+L 
Sbjct: 235 VNILKKLRSVSIEFPPDFDDNKMKV-EKKIIRLLIDHDPNKR-----PGARTLLN 283

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 40.5 bits (95), Expect = 4e-05
 Identities = 9/62 (14%), Positives = 22/62 (35%), Gaps = 5/62 (8%)

Query: 69  KVLHECNF-AHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPE----HILGTIT 123
           ++L E +   +++ ++      Q   I +E       + + +K           +L   T
Sbjct: 69  QLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTT 128

Query: 124 SA 125
           S 
Sbjct: 129 SG 130

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 40.0 bits (94), Expect = 5e-05
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 3/53 (5%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHIL 119
           + ++   N  +IV  YG         + ME++  G L   +L KA  I   + 
Sbjct: 74  VFIMSNLNHPNIVKLYGL--MHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVK 124

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 39.4 bits (92), Expect = 9e-05
 Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 50  KKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLIL 108
             + S++  ++       ++ +       +V  + AF  D ++ +  E+M GG L + + 
Sbjct: 192 TPHESDKETVRKE-----IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVA 246

Query: 109 KKAGKIPE 116
            +  K+ E
Sbjct: 247 DEHNKMSE 254

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 6/52 (11%)

Query: 18  FELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           FE   +  +     +   IF    +  + + L K P +R      + + IL+
Sbjct: 222 FETSKFFTDLRDGIIS-DIFDKKEKTLLQKLLSKKPEDR-----PNTSEILR 267

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 18/66 (27%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDIS----------------ICMEYMDGGSLDLILKKA- 111
           K L + +  +IV + G +                       I ME+ D G+L+  ++K  
Sbjct: 56  KALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 115

Query: 112 -GKIPE 116
             K+ +
Sbjct: 116 GEKLDK 121

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 6/40 (15%), Positives = 13/40 (32%), Gaps = 1/40 (2%)

Query: 78  HIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPE 116
            I+  Y  F     + + +E    G +   +  +     E
Sbjct: 72  SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSE 111

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 6/63 (9%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPE----HILGTI 122
           ++++   +  +I+  Y  F  + DI + ME   GG L + ++ K     E     I+  +
Sbjct: 57  IEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHK-RVFRESDAARIMKDV 115

Query: 123 TSA 125
            SA
Sbjct: 116 LSA 118

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 11/49 (22%), Positives = 21/49 (42%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEH 117
           ++       +I+  YG F     + + +EY   G++   L+K  K  E 
Sbjct: 61  EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ 109

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 11/82 (13%)

Query: 50  KKNPSERADLKTLSATTILKVL-HECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLI 107
           K + S  ++ K L    +LK+L H     +I+  Y  F   ++  + ME   GG L D I
Sbjct: 72  KTSVSTSSNSKLLEEVAVLKLLDHP----NIMKLYDFFEDKRNYYLVMECYKGGELFDEI 127

Query: 108 LKKAGKIPE----HILGTITSA 125
           + +  K  E     I+  + S 
Sbjct: 128 IHR-MKFNEVDAAVIIKQVLSG 148

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGK 113
           +VL   +  +I+  +  F    ++ I ME  +GG L + I+    +
Sbjct: 72  EVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQAR 117

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 13/65 (20%)

Query: 67  ILKVL-HECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKK-------AGKIPEH 117
           +LK L H     +I+  +  F   +   +  E+ +GG L + I+ +       A  I + 
Sbjct: 99  LLKSLDHP----NIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQ 154

Query: 118 ILGTI 122
           IL  I
Sbjct: 155 ILSGI 159

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 10/50 (20%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEH 117
           +++ + +  +I   Y  +  +Q I + ME   GG L D +          
Sbjct: 80  RLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGK 129

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 38.0 bits (89), Expect = 3e-04
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 78  HIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEH 117
           +I+  Y  F   + I + +E+   G L   L+K G+  E 
Sbjct: 75  NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQ 114

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 37.6 bits (87), Expect = 3e-04
 Identities = 12/70 (17%), Positives = 22/70 (31%), Gaps = 5/70 (7%)

Query: 50  KKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILK 109
             NP E           +++ L        + FY A +      +  E    G+L   + 
Sbjct: 105 PANPWEFYIGTQ-----LMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAIN 159

Query: 110 KAGKIPEHIL 119
                PE ++
Sbjct: 160 LYKNTPEKVM 169

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 6/63 (9%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPE----HILGTI 122
           + VL   +  +I+     F +  +IS+ +E + GG L D I++K G   E      +  I
Sbjct: 99  IGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEK-GYYSERDAADAVKQI 157

Query: 123 TSA 125
             A
Sbjct: 158 LEA 160

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKA 111
            + H     HIV     + SD  + +  E+MDG  L   I+K+A
Sbjct: 78  SICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRA 121

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 37.6 bits (88), Expect = 4e-04
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPE----HILGTI 122
           + VL +    +IV     + S     + M+ + GG L D IL++ G   E     ++  +
Sbjct: 57  IAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILER-GVYTEKDASLVIQQV 115

Query: 123 TSA 125
            SA
Sbjct: 116 LSA 118

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 37.8 bits (88), Expect = 4e-04
 Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 7/66 (10%)

Query: 49  LKKNPSERADLKTLSATTILKVL-HECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI 107
           LK++  E  +   L    ++K + H     ++V   G    +    I  E+M  G+L   
Sbjct: 253 LKEDTMEVEEF--LKEAAVMKEIKHP----NLVQLLGVCTREPPFYIITEFMTYGNLLDY 306

Query: 108 LKKAGK 113
           L++  +
Sbjct: 307 LRECNR 312

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 10/60 (16%), Positives = 18/60 (30%), Gaps = 12/60 (20%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDIS------------ICMEYMDGGSLDLILKKAGKIPE 116
           K L +     IV ++ A++                  I M+     +L   +     I E
Sbjct: 55  KALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE 114

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPE----HILGTIT 123
           ++  +    +IV  + +   +    +  + + GG L + I+ +     E    H +  I 
Sbjct: 80  RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQIL 138

Query: 124 SA 125
            +
Sbjct: 139 ES 140

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 6/68 (8%)

Query: 50  KKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLIL 108
            +   ++ ++K  +  +++  L   N   ++  Y AF S  DI + MEY+DGG L D I+
Sbjct: 124 TRGMKDKEEVK--NEISVMNQLDHAN---LIQLYDAFESKNDIVLVMEYVDGGELFDRII 178

Query: 109 KKAGKIPE 116
            ++  + E
Sbjct: 179 DESYNLTE 186

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 37.7 bits (88), Expect = 4e-04
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 12/71 (16%)

Query: 59  LKTLSATTILK------------VLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL 106
           +K L    ++K            +L   NF  +V    +F  + ++ + MEY+ GG +  
Sbjct: 71  MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFS 130

Query: 107 ILKKAGKIPEH 117
            L++ G+  E 
Sbjct: 131 HLRRIGRFSEP 141

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 37.4 bits (87), Expect = 5e-04
 Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPE----HILGTIT 123
           ++L + +  +I+  +          I  E   GG L D I+K+  +  E     I+  + 
Sbjct: 73  ELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR-KRFSEHDAARIIKQVF 131

Query: 124 SA 125
           S 
Sbjct: 132 SG 133

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 37.2 bits (87), Expect = 5e-04
 Identities = 9/62 (14%), Positives = 24/62 (38%), Gaps = 6/62 (9%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPE----HILGTIT 123
           ++  +    +IV  + +   +    +  + + GG L + I+ +     E    H +  I 
Sbjct: 57  RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQIL 115

Query: 124 SA 125
            +
Sbjct: 116 ES 117

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 37.2 bits (87), Expect = 6e-04
 Identities = 11/70 (15%), Positives = 33/70 (47%), Gaps = 6/70 (8%)

Query: 48  CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DL 106
            +K   +++  +K       + +L+     +I+  + +F S +++ +  E++ G  + + 
Sbjct: 37  FVKVKGTDQVLVKKE-----ISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFER 91

Query: 107 ILKKAGKIPE 116
           I   A ++ E
Sbjct: 92  INTSAFELNE 101

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 37.0 bits (86), Expect = 6e-04
 Identities = 12/68 (17%), Positives = 32/68 (47%), Gaps = 6/68 (8%)

Query: 50  KKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLIL 108
              P ++  +K       + ++++ +   ++  + AF    ++ + +E++ GG L D I 
Sbjct: 86  TPYPLDKYTVKNE-----ISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIA 140

Query: 109 KKAGKIPE 116
            +  K+ E
Sbjct: 141 AEDYKMSE 148

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 36.8 bits (86), Expect = 8e-04
 Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 5/52 (9%)

Query: 66  TILKVLHECNFAHIVGFYGAFIS--DQDISICMEYMDGGSLDLILKKAGKIP 115
             L++    N   ++   GA  S      ++   +M  GSL  +L +     
Sbjct: 59  PRLRIFSHPN---VLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFV 107

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 36.5 bits (85), Expect = 9e-04
 Identities = 10/63 (15%), Positives = 23/63 (36%), Gaps = 6/63 (9%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPE----HILGTI 122
            ++       +IV  + +   +    +  + + GG L + I+ +     E    H +  I
Sbjct: 61  ARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR-EYYSEADASHCIQQI 119

Query: 123 TSA 125
             A
Sbjct: 120 LEA 122

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 36.6 bits (85), Expect = 9e-04
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 8/63 (12%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKK-------AGKIPEHIL 119
           +++L + +  +I+  Y  F       +  E   GG L D I+ +       A +I   +L
Sbjct: 77  VQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVL 136

Query: 120 GTI 122
             I
Sbjct: 137 SGI 139

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	125
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.79
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.77
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.76
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.75
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.73
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.72
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.71
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.71
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.71
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.69
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.69
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.66
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.62
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.62
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.6
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.58
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.57
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.52
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.52
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.51
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.51
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.48
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.46
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.46
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.46
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.45
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.45
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.44
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.44
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.44
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.43
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.43
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.42
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.42
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.42
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.42
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.42
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.41
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.41
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.41
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.4
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.4
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.4
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.4
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.4
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.39
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.39
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.39
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.39
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.39
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.39
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.39
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.39
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.38
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.38
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.38
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.38
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.38
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.38
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.38
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.37
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.37
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.36
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.36
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.36
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.36
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.36
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.35
3bhy_A	283	Death-associated protein kinase 3; death associate	99.35
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.35
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.35
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.34
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.34
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.34
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.34
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.34
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.34
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.34
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.33
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.33
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.33
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.33
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.33
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.32
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.32
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.32
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.32
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.32
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.32
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.32
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.32
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.31
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.31
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.31
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.31
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.31
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.31
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.31
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.31
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.31
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.3
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.3
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.3
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.29
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.29
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.29
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.29
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.28
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.28
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.28
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.28
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.28
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.28
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.28
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.28
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.28
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.27
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.27
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.27
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.27
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.27
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.27
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.27
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.26
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.26
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.26
3uqc_A	286	Probable conserved transmembrane protein; structur	99.26
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.26
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.26
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.25
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.25
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.25
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.25
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.25
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.24
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.24
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.24
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.24
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.24
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.23
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.23
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.22
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.22
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.22
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.22
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.22
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.22
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.22
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.21
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.21
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.21
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.21
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.21
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.21
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.21
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.2
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.2
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.19
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.19
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.19
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.18
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.18
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.18
3niz_A	311	Rhodanese family protein; structural genomics, str	99.18
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.18
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.18
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.18
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.18
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.18
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.17
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.17
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.17
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.16
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.16
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.16
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.16
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.15
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.15
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.15
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.15
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.14
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.13
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.13
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.13
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.12
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.12
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.11
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.11
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.11
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.11
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.1
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.1
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.09
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.09
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.09
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.08
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.07
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.07
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.06
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.06
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.05
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.05
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.05
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.05
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.05
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.04
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.04
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.03
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.03
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.02
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.02
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.01
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.01
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	98.99
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	98.99
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	98.99
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	98.98
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	98.97
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	98.96
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	98.94
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	98.94
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	98.94
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	98.94
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	98.93
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	98.92
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	98.9
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	98.89
2dyl_A	318	Dual specificity mitogen-activated protein kinase	98.89
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	98.88
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	98.87
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	98.87
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	98.86
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	98.86
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	98.85
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	98.85
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	98.85
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	98.8
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	98.8
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.77
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.74
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.72
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	98.72
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	98.69
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	98.68
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	98.66
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	98.45
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	97.79
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	96.28
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	95.33
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	94.8
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	94.6
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	93.05
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	88.97
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	85.07

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.79  E-value=1.2e-20  Score=128.32  Aligned_cols=95  Identities=19%  Similarity=0.224  Sum_probs=77.8

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH------------HhhhHHHHHHHHHhcCCCceeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL------------KTLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      ++|++++.|        |+|+||.||++.+     +...+..+.            ....+.+|+.+++.++|||||+++
T Consensus        32 ~dy~i~~~l--------G~G~fg~V~~a~~-----~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~   98 (311)
T 4aw0_A           32 EDFKFGKIL--------GEGSFSTVVLARE-----LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY   98 (311)
T ss_dssp             GGEEEEEEE--------EEETTEEEEEEEE-----TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             cccEEEEEE--------ecccCeEEEEEEE-----CCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            568888888        9999999998532     222221111            112467899999999999999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++|.+++.+|||||||+||+|.++|++.+.++|..++.++
T Consensus        99 ~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~  138 (311)
T 4aw0_A           99 FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT  138 (311)
T ss_dssp             EEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHH
T ss_pred             EEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999999999998899999988765

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.77  E-value=1.2e-19  Score=125.27  Aligned_cols=103  Identities=18%  Similarity=0.211  Sum_probs=73.2

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      ..++.|+++++|        |+|+||.||++.+.     .++|........ .....+.+|+.+++.++|||||++++++
T Consensus        21 ~sme~Y~~~~~l--------G~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~   92 (350)
T 4b9d_A           21 QSMEKYVRLQKI--------GEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESF   92 (350)
T ss_dssp             SCCCCEEEEEEC--------------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CcccceEEeEEE--------ecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEE
Confidence            356789999999        99999999986432     122222111111 2233577999999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      .+++.+|||||||+||+|.++|+..  ..++|..++.++
T Consensus        93 ~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~  131 (350)
T 4b9d_A           93 EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF  131 (350)
T ss_dssp             EETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHH
T ss_pred             EECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHH
Confidence            9999999999999999999999865  356887776654

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.76  E-value=8.3e-20  Score=125.88  Aligned_cols=91  Identities=14%  Similarity=0.297  Sum_probs=70.5

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      ||+|+||.||++.+.     .+++...... ......+.+|+.+++.++|||||+++++|.+++.+|||||||++|+|.+
T Consensus        82 iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~  160 (346)
T 4fih_A           82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD  160 (346)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEEGGG-CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHH
T ss_pred             eecCcCeEEEEEEECCCCCEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHH
Confidence            499999999985432     1222111111 1112246789999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCHHHHhhhhc
Q psy14717        107 ILKKAGKIPEHILGTITS  124 (125)
Q Consensus       107 ~l~~~~~l~~~~~~~~~~  124 (125)
                      ++.+ +.+++..++.++.
T Consensus       161 ~l~~-~~l~e~~~~~~~~  177 (346)
T 4fih_A          161 IVTH-TRMNEEQIAAVCL  177 (346)
T ss_dssp             HHHH-SCCCHHHHHHHHH
T ss_pred             HHHc-CCCCHHHHHHHHH
Confidence            9987 5799998887653

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.75  E-value=1.5e-19  Score=127.40  Aligned_cols=91  Identities=14%  Similarity=0.293  Sum_probs=70.6

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      ||+|+||.||++.+.     .+++....... .....+.+|+.+++.++|||||+++++|.+++.+|||||||.||+|.+
T Consensus       159 iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~  237 (423)
T 4fie_A          159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD  237 (423)
T ss_dssp             EEECSSCEEEEEEETTTCCEEEEEEEESTTC-SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHH
T ss_pred             eccCcCcEEEEEEECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHH
Confidence            499999999985432     12222111111 112246789999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCHHHHhhhhc
Q psy14717        107 ILKKAGKIPEHILGTITS  124 (125)
Q Consensus       107 ~l~~~~~l~~~~~~~~~~  124 (125)
                      +++. +.+++..++.++.
T Consensus       238 ~i~~-~~l~e~~~~~~~~  254 (423)
T 4fie_A          238 IVTH-TRMNEEQIAAVCL  254 (423)
T ss_dssp             HHHH-SCCCHHHHHHHHH
T ss_pred             HHhc-cCCCHHHHHHHHH
Confidence            9987 5799998887753

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.73  E-value=2e-19  Score=123.55  Aligned_cols=87  Identities=25%  Similarity=0.316  Sum_probs=70.7

Q ss_pred             CCCCCchhHHHHHHHHHhhcCCCccccHHhh----hHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHH
Q psy14717         32 LPAGIFTDSFRDFVDRCLKKNPSERADLKTL----SATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI  107 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~~----~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~  107 (125)
                      ||+|+||.||++.     .+...+..+.+..    ...+|+.+++.++|||||++++++.+++.+|||||||+||+|.++
T Consensus        66 lG~G~fG~Vy~a~-----~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~  140 (336)
T 4g3f_A           66 VGRGSFGEVHRMK-----DKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL  140 (336)
T ss_dssp             EEEETTEEEEEEE-----ETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHH
T ss_pred             eccCCCeEEEEEE-----ECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHH
Confidence            3999999999843     3333333332221    234799999999999999999999999999999999999999999


Q ss_pred             HHHcCCCCHHHHhhhh
Q psy14717        108 LKKAGKIPEHILGTIT  123 (125)
Q Consensus       108 l~~~~~l~~~~~~~~~  123 (125)
                      |++.+.+++..++.++
T Consensus       141 l~~~~~l~e~~~~~~~  156 (336)
T 4g3f_A          141 IKQMGCLPEDRALYYL  156 (336)
T ss_dssp             HHHHSSCCHHHHHHHH
T ss_pred             HHHcCCCCHHHHHHHH
Confidence            9998899999887765

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.72  E-value=1.6e-19  Score=122.42  Aligned_cols=102  Identities=21%  Similarity=0.290  Sum_probs=75.0

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      .+.++|.+.++|        |+|+||.||++.+.          .+++..... .......+.+|+.+++.++|||||++
T Consensus        10 I~r~~~~l~~~l--------G~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l   80 (299)
T 4asz_A           10 IKRHNIVLKREL--------GEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKF   80 (299)
T ss_dssp             CCGGGEEEEEEE--------EC--CCCEEEEEECSCC----CEEEEEEEECSC-CHHHHHHHHHHHHHHTTCCCTTBCCE
T ss_pred             cCHHHeEEeeEE--------eeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-ChHHHHHHHHHHHHHHhCCCCCCccE
Confidence            345677777788        99999999986421          122221111 11223357899999999999999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcC-------------CCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAG-------------KIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~-------------~l~~~~~~~~~  123 (125)
                      ++++.+++.+|||||||++|+|.++|+.++             .+++..+..++
T Consensus        81 ~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~  134 (299)
T 4asz_A           81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIA  134 (299)
T ss_dssp             EEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHH
T ss_pred             EEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHH
Confidence            999999999999999999999999998742             58887776654

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.71  E-value=3.7e-19  Score=121.10  Aligned_cols=91  Identities=12%  Similarity=0.171  Sum_probs=68.4

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      .+.+.++++++|        |+|+||.||++.+.          .+++.............+.+|+.+++.++|||||++
T Consensus        23 i~~~~~~~~~~l--------G~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l   94 (308)
T 4gt4_A           23 ISLSAVRFMEEL--------GEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCL   94 (308)
T ss_dssp             CCGGGEEEEEEE--------EECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCHHHCeEeeEe--------ccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCc
Confidence            344566677777        99999999986421          122322222111222357899999999999999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++++..++.++||||||++|+|.++|..+
T Consensus        95 ~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~  123 (308)
T 4gt4_A           95 LGVVTKDQPLSMIFSYCSHGDLHEFLVMR  123 (308)
T ss_dssp             EEEECSSSSCEEEEECCSSCBHHHHHHTT
T ss_pred             ceEEEECCEEEEEEEcCCCCcHHHHHHhh
Confidence            99999999999999999999999999753

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.71  E-value=1.4e-18  Score=116.54  Aligned_cols=100  Identities=16%  Similarity=0.199  Sum_probs=72.8

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc--HHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD--LKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~--~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .++|++++.|        |+|+||.||++...     .++|........  .....+.+|+.+++.++||||+++++++.
T Consensus        12 ig~Y~i~~~l--------G~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~   83 (275)
T 3hyh_A           12 IGNYQIVKTL--------GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK   83 (275)
T ss_dssp             --CCEEEEEE--------EC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             eeCeEEEEEE--------ecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE
Confidence            4578888888        99999999985432     122211111111  11225678999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++.+||||||| +|+|.+++.+++.+++..++.++
T Consensus        84 ~~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~  118 (275)
T 3hyh_A           84 SKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFF  118 (275)
T ss_dssp             CSSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHH
T ss_pred             ECCEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHH
Confidence            999999999999 67999999998899999887765

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.71  E-value=4.4e-18  Score=114.92  Aligned_cols=92  Identities=17%  Similarity=0.265  Sum_probs=69.7

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe----CCeEEEEEEecCC
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFIS----DQDISICMEYMDG  101 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~----~~~~~iv~e~~~~  101 (125)
                      ||+|+||.||++.+.     .+++...... .......+.+|+.+++.++|||||+++++|.+    +..+|||||||++
T Consensus        34 iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~g  113 (290)
T 3fpq_A           34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTS  113 (290)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred             EecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCC
Confidence            399999999986432     1111111111 11223357799999999999999999999976    3469999999999


Q ss_pred             CCHHHHHHHcCCCCHHHHhhhh
Q psy14717        102 GSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       102 GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      |+|.+++++.+.+++..++.++
T Consensus       114 g~L~~~l~~~~~l~~~~~~~~~  135 (290)
T 3fpq_A          114 GTLKTYLKRFKVMKIKVLRSWC  135 (290)
T ss_dssp             CBHHHHHHHHSSCCHHHHHHHH
T ss_pred             CCHHHHHHhcCCCCHHHHHHHH
Confidence            9999999998899998887665

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.69  E-value=4e-19  Score=120.66  Aligned_cols=100  Identities=21%  Similarity=0.214  Sum_probs=73.4

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      +.|++++.|        |+|+||.||++...        .+++....... ......+.+|+.+++.++|||||++++++
T Consensus        24 ~~Y~i~~~l--------G~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~   95 (304)
T 3ubd_A           24 SQFELLKVL--------GQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAF   95 (304)
T ss_dssp             GGEEEEEEE--------ECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEE
T ss_pred             cccEEEEEE--------ecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEE
Confidence            579999999        99999999974210        11221111111 11122466899999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+++.+|||||||+||+|.+++++.+.+++..++.++
T Consensus        96 ~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~  132 (304)
T 3ubd_A           96 QTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL  132 (304)
T ss_dssp             EETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHH
T ss_pred             EECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999999999998899999888765

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.69  E-value=9.3e-19  Score=120.07  Aligned_cols=91  Identities=21%  Similarity=0.310  Sum_probs=68.2

Q ss_pred             CCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCC
Q psy14717         32 LPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDG  101 (125)
Q Consensus        32 lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~  101 (125)
                      ||+|+||.||++.+.          .+++..... .......+.+|+.+++.++|||||++++++.+++.+|||||||++
T Consensus        49 LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~  127 (329)
T 4aoj_A           49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRH  127 (329)
T ss_dssp             EEECSSEEEEEEEESSSCC---CEEEEEEEESCC-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred             EccCCCcEEEEEEECCcccCCCCeEEEEEEECcC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCC
Confidence            399999999986421          122221111 112233578999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHc---------------CCCCHHHHhhhh
Q psy14717        102 GSLDLILKKA---------------GKIPEHILGTIT  123 (125)
Q Consensus       102 GsL~~~l~~~---------------~~l~~~~~~~~~  123 (125)
                      |+|.++++.+               +.+++..+..++
T Consensus       128 G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  164 (329)
T 4aoj_A          128 GDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA  164 (329)
T ss_dssp             CBHHHHHHTSSCC-----------CCSCCHHHHHHHH
T ss_pred             CcHHHHHHhcCcccccccccccccCCCCCHHHHHHHH
Confidence            9999999864               247776665554

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.66  E-value=5.8e-18  Score=115.12  Aligned_cols=90  Identities=18%  Similarity=0.197  Sum_probs=67.4

Q ss_pred             CCCCchhHHHHHHH--HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHH
Q psy14717         33 PAGIFTDSFRDFVD--RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILK  109 (125)
Q Consensus        33 g~g~fg~v~~~~~~--~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~  109 (125)
                      |+|+||.||++.+.  .+++....... ......+.+|+.+++.++|||||++++++. .+.+|||||||++|+|.++|.
T Consensus        45 G~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gGsL~~~l~  123 (307)
T 3omv_A           45 GSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLH  123 (307)
T ss_dssp             CCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBHHHHHH
T ss_pred             eeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCCCHHHHHh
Confidence            99999999987532  12222221111 122335779999999999999999999775 456899999999999999998


Q ss_pred             Hc-CCCCHHHHhhhh
Q psy14717        110 KA-GKIPEHILGTIT  123 (125)
Q Consensus       110 ~~-~~l~~~~~~~~~  123 (125)
                      .. ..+++..+..++
T Consensus       124 ~~~~~l~~~~~~~i~  138 (307)
T 3omv_A          124 VQETKFQMFQLIDIA  138 (307)
T ss_dssp             TSCCCCCHHHHHHHH
T ss_pred             hcCCCCCHHHHHHHH
Confidence            65 578988776654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.62  E-value=2.5e-17  Score=111.64  Aligned_cols=92  Identities=17%  Similarity=0.207  Sum_probs=65.4

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      ++|++++.|        |+|+||.||++.+.     .+++.............+.+|+.+++.++|||||+++++|...+
T Consensus         5 ~dy~~~~~l--------G~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~   76 (299)
T 4g31_A            5 TDFEPIQCL--------GRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKN   76 (299)
T ss_dssp             HHEEEEEEE--------EECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC
T ss_pred             hhCEEeeEE--------ecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecC
Confidence            467777888        99999999985431     12222111111122235678999999999999999999997654


Q ss_pred             ------------eEEEEEEecCCCCHHHHHHHcCCCC
Q psy14717         91 ------------DISICMEYMDGGSLDLILKKAGKIP  115 (125)
Q Consensus        91 ------------~~~iv~e~~~~GsL~~~l~~~~~l~  115 (125)
                                  .+||+||||++|+|.++++....++
T Consensus        77 ~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~  113 (299)
T 4g31_A           77 TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIE  113 (299)
T ss_dssp             ----------CEEEEEEEECCCSCCHHHHHHTCCSGG
T ss_pred             ccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCC
Confidence                        3799999999999999999865544

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.62  E-value=7.3e-17  Score=119.02  Aligned_cols=99  Identities=21%  Similarity=0.260  Sum_probs=75.7

Q ss_pred             CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHh------------hhHHHH---HHHHHhcCC
Q psy14717         12 PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKT------------LSATTI---LKVLHECNF   76 (125)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~------------~~~~~e---~~~~~~~~h   76 (125)
                      +.-+++|++++.|        |+|+||.||++     ..+...+..+.+.            ....+|   +.+++.++|
T Consensus       185 ~~slddf~i~k~L--------G~G~fG~V~la-----~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~H  251 (689)
T 3v5w_A          185 HLTMNDFSVHRII--------GRGGFGEVYGC-----RKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDC  251 (689)
T ss_dssp             CCCGGGEEEEEEE--------EECSSEEEEEE-----EETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCC
T ss_pred             CCchHHeEEEEEE--------ecccCeEEEEE-----EECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCC
Confidence            3446778888888        99999999984     3333322222211            012233   456667799


Q ss_pred             CceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         77 AHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        77 ~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ||||+++++|.+++.+|||||||+||+|.++|.+.+.+++..+++++
T Consensus       252 P~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~  298 (689)
T 3v5w_A          252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYA  298 (689)
T ss_dssp             TTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHH
T ss_pred             CCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            99999999999999999999999999999999998899999988775

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.60  E-value=4.9e-17  Score=118.56  Aligned_cols=96  Identities=15%  Similarity=0.230  Sum_probs=75.7

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCcccc---------HHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERAD---------LKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~---------~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      ++.|++++.|        |+|+||.||++..     +...+..+         .....+.+|+.+|+.++||||++++++
T Consensus       156 l~~Y~i~~~l--------G~G~fg~V~~~~~-----~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~  222 (573)
T 3uto_A          156 LDHYDIHEEL--------GTGAFGVVHRVTE-----RATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA  222 (573)
T ss_dssp             GGTEEEEEEE--------EEETTEEEEEEEE-----TTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEE
T ss_pred             ccccEEEEEE--------eeccCeEEEEEEE-----CCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence            3567777888        9999999998432     22221111         122356789999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      |.++..+||+||||.||+|.++|... +.+++..++.++
T Consensus       223 ~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~  261 (573)
T 3uto_A          223 FEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYM  261 (573)
T ss_dssp             EECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHH
T ss_pred             EEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHH
Confidence            99999999999999999999999643 679998887664

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.58  E-value=3.2e-17  Score=113.37  Aligned_cols=89  Identities=16%  Similarity=0.165  Sum_probs=63.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCC-Cceeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNF-AHIVGFY   83 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h-~~iv~~~   83 (125)
                      .+.|++.+.|        |+|+||.||++.+.          .+++.............+.+|+.++..+.| ||||+++
T Consensus        63 ~~~~~l~~~L--------G~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~  134 (353)
T 4ase_A           63 RDRLKLGKPL--------GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL  134 (353)
T ss_dssp             GGGEEEEEEE--------EECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             HHHeEEeeEE--------ecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence            3456666667        99999999986421          011111111111223357789999999855 8999999


Q ss_pred             eeEEeC-CeEEEEEEecCCCCHHHHHHHc
Q psy14717         84 GAFISD-QDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        84 ~~~~~~-~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++|..+ +.+|||||||++|+|.++|+..
T Consensus       135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~  163 (353)
T 4ase_A          135 GACTKPGGPLMVIVEFCKFGNLSTYLRSK  163 (353)
T ss_dssp             EEECCTTSCCEEEEECCTTEEHHHHHHHT
T ss_pred             EEEEecCCEEEEEEEcCCCCCHHHHHHhc
Confidence            998764 5699999999999999999864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.57  E-value=1.1e-16  Score=112.31  Aligned_cols=99  Identities=13%  Similarity=0.201  Sum_probs=72.9

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC-
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISD-   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~-   89 (125)
                      .|++++.|        |+|+||.||++.+.     .+++....... ......+.+|+.+++.++|||||++++++... 
T Consensus        55 ~Y~~~~~l--------G~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~  126 (398)
T 4b99_A           55 EYEIIETI--------GNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTV  126 (398)
T ss_dssp             SEEEEEEE--------EECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSS
T ss_pred             CeEEEEEE--------ecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccc
Confidence            46666666        99999999986432     12222221111 11223567899999999999999999987643 


Q ss_pred             -----CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhhc
Q psy14717         90 -----QDISICMEYMDGGSLDLILKKAGKIPEHILGTITS  124 (125)
Q Consensus        90 -----~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~~  124 (125)
                           ..+|||||||. |+|.+++.+.+.+++..++.++.
T Consensus       127 ~~~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~  165 (398)
T 4b99_A          127 PYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLY  165 (398)
T ss_dssp             CTTTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHH
T ss_pred             ccccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHH
Confidence                 56999999997 58999999888999998887653

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.52  E-value=3.4e-16  Score=106.20  Aligned_cols=88  Identities=17%  Similarity=0.172  Sum_probs=60.9

Q ss_pred             CCCCchhHHHHHHH---HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC----eEEEEEEecCCCCHH
Q psy14717         33 PAGIFTDSFRDFVD---RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ----DISICMEYMDGGSLD  105 (125)
Q Consensus        33 g~g~fg~v~~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~----~~~iv~e~~~~GsL~  105 (125)
                      |+|+||.||++.+.   .++|.....  ........+|+..+..++||||+++++++..++    .+|||||||++|+|.
T Consensus        12 G~G~fG~Vy~~~~~g~~VAvK~l~~~--~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~   89 (303)
T 3hmm_A           12 GKGRFGEVWRGKWRGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLF   89 (303)
T ss_dssp             EECSSSEEEEEEETTEEEEEEEECGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHH
T ss_pred             eeCCCeEEEEEEECCEEEEEEEECcc--chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHH
Confidence            99999999986432   112211111  111112234555556789999999999998754    589999999999999


Q ss_pred             HHHHHcCCCCHHHHhhhh
Q psy14717        106 LILKKAGKIPEHILGTIT  123 (125)
Q Consensus       106 ~~l~~~~~l~~~~~~~~~  123 (125)
                      +++++. .++++.+.+++
T Consensus        90 ~~l~~~-~l~~~~~~~i~  106 (303)
T 3hmm_A           90 DYLNRY-TVTVEGMIKLA  106 (303)
T ss_dssp             HHHHHC-CBCHHHHHHHH
T ss_pred             HHHHhC-CCCHHHHHHHH
Confidence            999884 68877665554

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.52  E-value=1.5e-15  Score=105.34  Aligned_cols=97  Identities=20%  Similarity=0.325  Sum_probs=71.8

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH-------HhhhHHHHHHHHHhc-CCCceeeeeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL-------KTLSATTILKVLHEC-NFAHIVGFYGA   85 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~-------~~~~~~~e~~~~~~~-~h~~iv~~~~~   85 (125)
                      ..+.|++.++|        |+|+||.||++...  ......+..+.       ....+.+|+.+++.+ +||||++++++
T Consensus        19 l~~~Y~i~~~l--------G~G~fg~Vy~a~~~--~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~   88 (361)
T 4f9c_A           19 LSNVFKIEDKI--------GEGTFSSVYLATAQ--LQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYC   88 (361)
T ss_dssp             GGGTCEEEEEE--------EECSSEEEEEEEEE--BTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEE
T ss_pred             ccCcEEEEEEE--------ecccCcEEEEEEEc--ccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEE
Confidence            34567777777        99999999985321  00001111111       122467899999987 79999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      |.+++.+|||||||++|+|.++++   .+++..++.++
T Consensus        89 ~~~~~~~~lvmE~~~g~~L~~~~~---~l~~~~~~~~~  123 (361)
T 4f9c_A           89 FRKNDHVVIAMPYLEHESFLDILN---SLSFQEVREYM  123 (361)
T ss_dssp             EEETTEEEEEEECCCCCCHHHHHT---TCCHHHHHHHH
T ss_pred             EEECCEEEEEEeCCCcccHHHHHc---CCCHHHHHHHH
Confidence            999999999999999999999983   58888887665

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.51  E-value=5e-15  Score=102.44  Aligned_cols=100  Identities=17%  Similarity=0.157  Sum_probs=77.7

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ..+.|++++.|        |+|+||.||++...     .+++....  .......+.+|+.+++.++||||+++++++..
T Consensus        18 ~~~~y~~~~~l--------G~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   87 (361)
T 3uc3_A           18 DSDRYDFVKDI--------GSGNFGVARLMRDKLTKELVAVKYIER--GAAIDENVQREIINHRSLRHPNIVRFKEVILT   87 (361)
T ss_dssp             CTTTEEEEEEE--------SSSTTSSEEEEEETTTCCEEEEEEEES--STTSCHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCCcEEEEEEe--------ccCCCEEEEEEEECCCCcEEEEEEEec--CccccHHHHHHHHHHHhCCCCCCCcEEEEEee
Confidence            34688999999        99999999985332     11111111  01112246689999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +..++++||||.+|+|.+++...+.+++..++.++
T Consensus        88 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~  122 (361)
T 3uc3_A           88 PTHLAIIMEYASGGELYERICNAGRFSEDEARFFF  122 (361)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             CCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence            99999999999999999999888889988877664

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.48  E-value=5.6e-15  Score=101.07  Aligned_cols=104  Identities=16%  Similarity=0.197  Sum_probs=79.8

Q ss_pred             CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         12 PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      ....+.|++++.|        |.|+||.||++.+.     .+++........ .....+.+|+.+++.++||||++++++
T Consensus        11 ~~~~~~y~~~~~l--------G~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~   82 (328)
T 3fe3_A           11 QPHIGNYRLLKTI--------GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV   82 (328)
T ss_dssp             CCEETTEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CCccCCEEEEEEE--------eeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            3446788999999        99999999985431     111111111111 122346789999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +...+.+|++|||+++|+|.+++...+.+++..++.++
T Consensus        83 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~  120 (328)
T 3fe3_A           83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF  120 (328)
T ss_dssp             EECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHH
T ss_pred             EEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            99999999999999999999999888889988877654

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.46  E-value=1.3e-14  Score=101.34  Aligned_cols=98  Identities=15%  Similarity=0.257  Sum_probs=78.1

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH------------HhhhHHHHHHHHHhcCCCcee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL------------KTLSATTILKVLHECNFAHIV   80 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~~~~~~~~h~~iv   80 (125)
                      ...+.|++++.|        |.|+||.||.+..     .......+.            ....+.+|+.++..++||||+
T Consensus        12 v~~~~y~i~~~L--------G~G~fG~V~~~~~-----~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv   78 (384)
T 4fr4_A           12 VNFDHFEILRAI--------GKGSFGKVCIVQK-----NDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLV   78 (384)
T ss_dssp             CCGGGEEEEEEE--------ECCTTCCEEEEEE-----TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBC
T ss_pred             CChHHeEEEEEE--------eeCCCeEEEEEEE-----CCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCC
Confidence            346789999999        9999999998432     221111111            112456899999999999999


Q ss_pred             eeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         81 GFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        81 ~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++++.+.+.+|++|||+.+|+|..++.+...+++..++.++
T Consensus        79 ~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~  121 (384)
T 4fr4_A           79 NLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI  121 (384)
T ss_dssp             CEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHH
T ss_pred             cEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999999999999999988889998877664

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.46  E-value=1.4e-14  Score=99.76  Aligned_cols=105  Identities=22%  Similarity=0.327  Sum_probs=78.6

Q ss_pred             CCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-cH-HhhhHHHHHHHHHhc-CCCceeee
Q psy14717         11 VPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-DL-KTLSATTILKVLHEC-NFAHIVGF   82 (125)
Q Consensus        11 ~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~~-~~~~~~~e~~~~~~~-~h~~iv~~   82 (125)
                      .+...+.|++++.|        |+|+||.||++...     .+++....... .. ....+.+|..++..+ +||||+++
T Consensus         4 ~~~~~~~y~~~~~l--------G~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l   75 (345)
T 3a8x_A            4 DPLGLQDFDLLRVI--------GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL   75 (345)
T ss_dssp             CCCCGGGEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             CCCchhheEEEEEE--------EecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeE
Confidence            34456788998999        99999999985321     11111111110 11 122456789999886 89999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++.+...+|++|||+++|+|.+++.+.+.+++..++.++
T Consensus        76 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~  116 (345)
T 3a8x_A           76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS  116 (345)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             EEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            99999999999999999999999999988889998877664

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.46  E-value=1.4e-14  Score=101.50  Aligned_cols=102  Identities=20%  Similarity=0.323  Sum_probs=75.2

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc--HHhhhHHHHHHHHHhc-CCCceeeeeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD--LKTLSATTILKVLHEC-NFAHIVGFYGA   85 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~--~~~~~~~~e~~~~~~~-~h~~iv~~~~~   85 (125)
                      ..+.|++++.|        |+|+||.||++...     .+++........  .....+.+|..++..+ +||||++++++
T Consensus        50 ~~~~y~~~~~L--------G~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~  121 (396)
T 4dc2_A           50 GLQDFDLLRVI--------GRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSC  121 (396)
T ss_dssp             CGGGEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             ChhHcEEEEEE--------eeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEE
Confidence            34577788888        99999999985321     011111111000  1111356788888875 89999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.+.+.+|+|||||++|+|..++.+.+.+++..++.++
T Consensus       122 ~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~  159 (396)
T 4dc2_A          122 FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS  159 (396)
T ss_dssp             EECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             EEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            99999999999999999999999988889998887765

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.45  E-value=2.4e-14  Score=98.74  Aligned_cols=98  Identities=17%  Similarity=0.294  Sum_probs=76.4

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH------------HhhhHHHHHHHHHhcCCCcee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL------------KTLSATTILKVLHECNFAHIV   80 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~~~~~~~~h~~iv   80 (125)
                      ...+.|++++.|        |.|+||.||.+..     +......+.            ....+.+|+.++..++||||+
T Consensus        38 ~~~~~y~~~~~l--------G~G~~g~V~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv  104 (350)
T 1rdq_E           38 AQLDQFDRIKTL--------GTGSFGRVMLVKH-----KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV  104 (350)
T ss_dssp             CCGGGEEEEEEE--------EECSSCEEEEEEE-----TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBC
T ss_pred             CCHHHCEEEEEe--------ecCcCcEEEEEEE-----CCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCC
Confidence            345677777777        9999999998432     111111111            112456799999999999999


Q ss_pred             eeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         81 GFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        81 ~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++++.+...+|++|||+++|+|.+++.+.+.+++..++.++
T Consensus       105 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~  147 (350)
T 1rdq_E          105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA  147 (350)
T ss_dssp             CEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHH
T ss_pred             eEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999999999999988889998877664

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.45  E-value=1.8e-14  Score=99.02  Aligned_cols=96  Identities=20%  Similarity=0.257  Sum_probs=75.8

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH------------HhhhHHHHHHHHHhcCCCceeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL------------KTLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      .+.|++++.|        |.|+||.||++..     +...+..+.            ....+.+|+.++..++||||+++
T Consensus         4 ~~~y~~~~~l--------G~G~fg~V~~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l   70 (337)
T 1o6l_A            4 MNDFDYLKLL--------GKGTFGKVILVRE-----KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL   70 (337)
T ss_dssp             GGGEEEEEEE--------EECSSEEEEEEEE-----TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCE
T ss_pred             hHHeEEEEEE--------ecCCCeEEEEEEE-----CCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcce
Confidence            4577888888        9999999998432     211111111            11245689999999999999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++...+.+|++|||+++|+|..++.+.+.+++..++.++
T Consensus        71 ~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~  111 (337)
T 1o6l_A           71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG  111 (337)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHH
T ss_pred             EEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            99999999999999999999999999988889998877664

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.44  E-value=2.2e-14  Score=97.78  Aligned_cols=97  Identities=19%  Similarity=0.329  Sum_probs=75.8

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH------------HhhhHHHHHHHHHhcCCCceee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL------------KTLSATTILKVLHECNFAHIVG   81 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~~~~~~~~h~~iv~   81 (125)
                      ..+.|++++.|        |.|+||.||++..     +...+..+.            ....+.+|..+++.++||||++
T Consensus         4 ~~~~y~~~~~l--------G~G~~g~V~~~~~-----~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~   70 (318)
T 1fot_A            4 SLQDFQILRTL--------GTGSFGRVHLIRS-----RHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIR   70 (318)
T ss_dssp             CGGGEEEEEEE--------EECSSCEEEEEEE-----TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCC
T ss_pred             ChHHcEEEEEE--------eeCCCEEEEEEEE-----CCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCce
Confidence            34678888888        9999999997432     111111111            1113557899999999999999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++++.+...+|++|||+++|+|.++++..+.+++..++.++
T Consensus        71 ~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~  112 (318)
T 1fot_A           71 MWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYA  112 (318)
T ss_dssp             EEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHH
T ss_pred             EeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence            999999999999999999999999999988889988877654

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.44  E-value=3.5e-14  Score=98.77  Aligned_cols=107  Identities=19%  Similarity=0.170  Sum_probs=80.7

Q ss_pred             CCCCCCchHHHHHHHhhcCCCCCCCCC--CchhHHHHHHH-----HHhhcCCCccccH-HhhhHHHHHHHHHhcCCCcee
Q psy14717          9 SNVPRPMAIFELLDYIVNEPPPKLPAG--IFTDSFRDFVD-----RCLKKNPSERADL-KTLSATTILKVLHECNFAHIV   80 (125)
Q Consensus         9 ~~~~~~~~~~~~~~~i~~~~~~~lg~g--~fg~v~~~~~~-----~~~~~~~~~~~~~-~~~~~~~e~~~~~~~~h~~iv   80 (125)
                      ++.....+.|++++.|        |.|  +||.||++...     .+++......... ....+.+|+.+++.++||||+
T Consensus        18 s~~~~~~~~y~~~~~l--------G~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv   89 (389)
T 3gni_B           18 SSFLPEGGCYELLTVI--------GKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIV   89 (389)
T ss_dssp             CCCCCCGGGEEEEEEE--------EEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             hcccCCCCcEEEEecc--------cCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCC
Confidence            4445566799999999        999  99999985432     1111111111111 122466899999999999999


Q ss_pred             eeeeeEEeCCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         81 GFYGAFISDQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        81 ~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      ++++++...+.+|++||||++|+|.+++...  ..+++..++.++
T Consensus        90 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  134 (389)
T 3gni_B           90 PYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYIL  134 (389)
T ss_dssp             CEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHH
T ss_pred             cEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHH
Confidence            9999999999999999999999999999886  678888776654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.44  E-value=3.1e-14  Score=95.93  Aligned_cols=100  Identities=16%  Similarity=0.306  Sum_probs=74.7

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      +...|++++.|        |.|+||.||++...     .+++...... ......+.+|+.+++.++||||+++++++..
T Consensus        18 ~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   88 (297)
T 3fxz_A           18 PKKKYTRFEKI--------GQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLV   88 (297)
T ss_dssp             GGGTBCCCEEE--------EEETTEEEEEEEBTTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             hhhceeeeeee--------ccCCCeEEEEEEECCCCcEEEEEEeeccc-ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE
Confidence            34567777777        99999999985321     1111111111 1112246789999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+.+|++|||+.+|+|.+++... .+++..+..++
T Consensus        89 ~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~  122 (297)
T 3fxz_A           89 GDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVC  122 (297)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHS-CCCHHHHHHHH
T ss_pred             CCEEEEEEECCCCCCHHHHHhhc-CCCHHHHHHHH
Confidence            99999999999999999999884 68887776654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.43  E-value=2e-14  Score=96.66  Aligned_cols=101  Identities=13%  Similarity=0.132  Sum_probs=77.0

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCC--ccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPS--ERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~--~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .+.|++++.|        |.|+||.||++.+.     .+++....  .........+.+|+.+++.++||||+++++++.
T Consensus        10 ~~~y~i~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~   81 (294)
T 4eqm_A           10 NERYKIVDKL--------GGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE   81 (294)
T ss_dssp             ETTEEEEEEE--------EEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE
T ss_pred             hccEEEEEEE--------ccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee
Confidence            4578888888        99999999975321     11111111  111112235678999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..+..|++|||+++|+|.+++...+.+++..+..++
T Consensus        82 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~  117 (294)
T 4eqm_A           82 EDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFT  117 (294)
T ss_dssp             CSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHH
T ss_pred             eCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence            999999999999999999999988889988776654

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.43  E-value=2.5e-14  Score=101.51  Aligned_cols=102  Identities=10%  Similarity=0.037  Sum_probs=75.8

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      ..+.|++++.|        |.|+||.||++...     .+++....... ......+.+|+.+++.++||||+++++++.
T Consensus         9 ~~~~Y~i~~~L--------G~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~   80 (444)
T 3soa_A            9 FTEEYQLFEEL--------GKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS   80 (444)
T ss_dssp             HHHHEEEEEEE--------EEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEE
T ss_pred             ccCCeEEEEEe--------ccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEE
Confidence            34577788888        99999999985321     11111111111 122235678999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .++..|++||||.+|+|.+++...+.+++..+..++
T Consensus        81 ~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~  116 (444)
T 3soa_A           81 EEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCI  116 (444)
T ss_dssp             CSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHH
T ss_pred             ECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence            999999999999999999999998889998877654

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.42  E-value=2.2e-14  Score=95.32  Aligned_cols=103  Identities=17%  Similarity=0.172  Sum_probs=77.3

Q ss_pred             CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         12 PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      -...+.|++.+.|        |.|+||.||++....     ++++.... .......+.+|+.+++.++||||+++++++
T Consensus         5 ~~~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   75 (277)
T 3f3z_A            5 GDINQYYTLENTI--------GRGSWGEVKIAVQKGTRIRRAAKKIPKY-FVEDVDRFKQEIEIMKSLDHPNIIRLYETF   75 (277)
T ss_dssp             -CHHHHEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEEGG-GCSCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhhhhhEEeeeEE--------eecCCEEEEEEEeCCCCcEEEEEeehhh-ccchHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            3445678888888        999999999853211     11111110 011123567899999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ......+++|||+++|+|.+++...+.+++..+..++
T Consensus        76 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~  112 (277)
T 3f3z_A           76 EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIM  112 (277)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHH
T ss_pred             ecCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999999888889988776654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.42  E-value=2.7e-14  Score=98.91  Aligned_cols=102  Identities=12%  Similarity=0.158  Sum_probs=77.0

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-----cHHhhhHHHHHHHHHhcCCCceeeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-----DLKTLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-----~~~~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      ..+.|++.+.|        |.|+||.||++...     .+++.......     ......+.+|+.+++.+.||||++++
T Consensus        10 ~~~~y~~~~~L--------G~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~   81 (361)
T 2yab_A           10 VEDFYDIGEEL--------GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLH   81 (361)
T ss_dssp             GGGTEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             hhhceEEeeEE--------eeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEE
Confidence            34568888888        99999999985321     11111111000     00123567899999999999999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++.+...++++|||+++|+|.+++...+.+++..+..++
T Consensus        82 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~  121 (361)
T 2yab_A           82 DVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI  121 (361)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHH
T ss_pred             EEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999999999999887889988877654

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.42  E-value=2.9e-14  Score=100.36  Aligned_cols=94  Identities=22%  Similarity=0.265  Sum_probs=71.5

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHH------------hhhHHHHHHHHHhcCCCceeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLK------------TLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~------------~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      +.|++++.|        |.|+||.||++..     +......+.+            ...+.+|+.++..++||||++++
T Consensus        69 ~~y~~~~~L--------G~G~fG~V~~~~~-----~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~  135 (410)
T 3v8s_A           69 EDYEVVKVI--------GRGAFGEVQLVRH-----KSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLF  135 (410)
T ss_dssp             GGEEEEEEE--------EECSSEEEEEEEE-----TTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccEEEEEE--------EcCCCEEEEEEEE-----CCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            345555566        9999999998432     2222111111            11356899999999999999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++.+...+|+|||||++|+|.+++++ ..+++..++.++
T Consensus       136 ~~~~~~~~~~lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~  174 (410)
T 3v8s_A          136 YAFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYT  174 (410)
T ss_dssp             EEEECSSEEEEEECCCTTEEHHHHHHH-CCCCHHHHHHHH
T ss_pred             EEEEECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHH
Confidence            999999999999999999999999987 579988877664

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.42  E-value=1.7e-14  Score=100.19  Aligned_cols=100  Identities=17%  Similarity=0.234  Sum_probs=72.8

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      ..|++.+.|        |.|+||.||++...        .+++.............+.+|+.++..++||||+++++++.
T Consensus        45 ~~~~~~~~l--------G~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~  116 (373)
T 2qol_A           45 TNISIDKVV--------GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT  116 (373)
T ss_dssp             GGCCCCEEE--------EECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             hhceeeeEE--------eeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            345555555        99999999986532        11222111111122335778999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ..+.++++|||+++|+|.++++.. ..+++..+..++
T Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~  153 (373)
T 2qol_A          117 KSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML  153 (373)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHH
T ss_pred             eCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHH
Confidence            999999999999999999999875 368877765544

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.42  E-value=8.1e-15  Score=99.39  Aligned_cols=107  Identities=21%  Similarity=0.266  Sum_probs=77.2

Q ss_pred             CCCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717          9 SNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus         9 ~~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .+...+...|++.+.|        |.|+||.||++...   .+++....... ......+.+|+.+++.++||||+++++
T Consensus        30 ~~~~i~~~~y~i~~~l--------G~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~  101 (309)
T 3p86_A           30 DDMDIPWCDLNIKEKI--------GAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG  101 (309)
T ss_dssp             --CBCCGGGEEEEEEE--------EECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccccCChhHceeeeEe--------ecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            3344556677777888        99999999985321   12222111111 122235678999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHcCC---CCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKAGK---IPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~~~---l~~~~~~~~~  123 (125)
                      ++...+.++++|||+.+|+|.+++.....   +++..+..++
T Consensus       102 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~  143 (309)
T 3p86_A          102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA  143 (309)
T ss_dssp             EECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHH
T ss_pred             EEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHH
Confidence            99999999999999999999999987543   7777665543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.41  E-value=2.7e-14  Score=98.67  Aligned_cols=97  Identities=19%  Similarity=0.306  Sum_probs=74.7

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHH------------hhhHHHHHHHHHhc-CCCcee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLK------------TLSATTILKVLHEC-NFAHIV   80 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~------------~~~~~~e~~~~~~~-~h~~iv   80 (125)
                      ..+.|++++.|        |.|+||.||++..     +...+..+.+            .....+|..++..+ +||||+
T Consensus        21 ~~~~y~~~~~l--------G~G~fg~V~~~~~-----~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv   87 (353)
T 3txo_A           21 GIDNFEFIRVL--------GKGSFGKVMLARV-----KETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLT   87 (353)
T ss_dssp             --CCEEEEEEE--------EEETTEEEEEEEE-----TTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBC
T ss_pred             chhheEEEEEE--------eeCCCEEEEEEEE-----cCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCcee
Confidence            34578888888        9999999998432     2221111111            11355788888886 799999


Q ss_pred             eeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         81 GFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        81 ~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++++.+.+.+|++||||++|+|..++.+.+.+++..++.++
T Consensus        88 ~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~  130 (353)
T 3txo_A           88 QLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYA  130 (353)
T ss_dssp             CEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             eEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999999999999988889998887665

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.41  E-value=3.2e-14  Score=98.66  Aligned_cols=89  Identities=15%  Similarity=0.199  Sum_probs=65.4

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH------------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD------------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGF   82 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~   82 (125)
                      +.|++.+.|        |.|+||.||++...            .+++.............+.+|+.+++.+ +||||+++
T Consensus        81 ~~~~~~~~L--------G~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~  152 (370)
T 2psq_A           81 DKLTLGKPL--------GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL  152 (370)
T ss_dssp             GGEEEEEEE--------SCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCE
T ss_pred             HHCEeeeEE--------eeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeE
Confidence            345555555        99999999975321            1222222111112223577899999999 89999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcC
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAG  112 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~  112 (125)
                      ++++...+.+|++|||+++|+|.++++..+
T Consensus       153 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~  182 (370)
T 2psq_A          153 LGACTQDGPLYVIVEYASKGNLREYLRARR  182 (370)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTC
T ss_pred             EEEEccCCCEEEEEEcCCCCCHHHHHHhhC
Confidence            999999999999999999999999998753

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.41  E-value=6.1e-14  Score=95.65  Aligned_cols=102  Identities=13%  Similarity=0.155  Sum_probs=76.5

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-----cHHhhhHHHHHHHHHhcCCCceeeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-----DLKTLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-----~~~~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      ..+.|++.+.|        |.|+||.||++...     .+++.......     ......+.+|+.+++.++||||++++
T Consensus         9 ~~~~y~~~~~l--------G~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~   80 (326)
T 2y0a_A            9 VDDYYDTGEEL--------GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLH   80 (326)
T ss_dssp             HHHHEEEEEEE--------ECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             cccceEeceEE--------eeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEE
Confidence            34567777888        99999999985331     11111111000     01123567899999999999999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++.....++++|||+++|+|.+++...+.+++..+..++
T Consensus        81 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~  120 (326)
T 2y0a_A           81 EVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL  120 (326)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHH
T ss_pred             EEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHH
Confidence            9999999999999999999999999887789988776654

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.40  E-value=8e-15  Score=100.83  Aligned_cols=96  Identities=15%  Similarity=0.182  Sum_probs=73.8

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH-----HhhhHHHHHHHHHhc-CCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL-----KTLSATTILKVLHEC-NFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~   88 (125)
                      .+.|++++.|        |.|+||.||++..     +......+.     ......+|+.++..+ +||||+++++++.+
T Consensus        21 ~~~y~~~~~l--------G~G~~g~V~~~~~-----~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~   87 (342)
T 2qr7_A           21 TDGYEVKEDI--------GVGSYSVCKRCIH-----KATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDD   87 (342)
T ss_dssp             HHHEEEEEEE--------EECSSEEEEEEEE-----TTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEEC
T ss_pred             cccEEEEEEE--------eeCCCEEEEEEEE-----CCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEc
Confidence            4567777777        9999999998432     222221111     112345788888876 89999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ...+|++||||.+|+|.+++.+.+.+++..++.++
T Consensus        88 ~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~  122 (342)
T 2qr7_A           88 GKYVYVVTELMKGGELLDKILRQKFFSEREASAVL  122 (342)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHH
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            99999999999999999999988889998877654

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.40  E-value=5e-14  Score=99.86  Aligned_cols=86  Identities=24%  Similarity=0.293  Sum_probs=67.4

Q ss_pred             CCCCchhHHHHHHHHHhhcCCCccccHH------------hhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecC
Q psy14717         33 PAGIFTDSFRDFVDRCLKKNPSERADLK------------TLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMD  100 (125)
Q Consensus        33 g~g~fg~v~~~~~~~~~~~~~~~~~~~~------------~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~  100 (125)
                      |+|+||.||++..     +...+..+.+            ...+.+|..++..++|+||+++++++.+.+.+|+|||||+
T Consensus        83 G~G~fG~V~~~~~-----~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~  157 (437)
T 4aw2_A           83 GRGAFGEVAVVKL-----KNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYV  157 (437)
T ss_dssp             EECSSEEEEEEEE-----TTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred             EeCCCEEEEEEEE-----cCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCC
Confidence            9999999998532     1111111111            1136679999999999999999999999999999999999


Q ss_pred             CCCHHHHHHH-cCCCCHHHHhhhh
Q psy14717        101 GGSLDLILKK-AGKIPEHILGTIT  123 (125)
Q Consensus       101 ~GsL~~~l~~-~~~l~~~~~~~~~  123 (125)
                      +|+|.+++.+ .+.+++..++.++
T Consensus       158 gg~L~~~l~~~~~~l~e~~~~~~~  181 (437)
T 4aw2_A          158 GGDLLTLLSKFEDRLPEEMARFYL  181 (437)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHH
T ss_pred             CCcHHHHHHHccCCCCHHHHHHHH
Confidence            9999999987 4679998877664

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.40  E-value=9.7e-15  Score=99.59  Aligned_cols=100  Identities=16%  Similarity=0.198  Sum_probs=73.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      +.|++.+.|        |.|+||.||++.+.        .+++.............+.+|+.+++.++||||+++++++.
T Consensus        49 ~~y~i~~~l--------G~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  120 (325)
T 3kul_A           49 SRIHIEKII--------GSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT  120 (325)
T ss_dssp             GGEEEEEEE--------EETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred             hHeEEeeEE--------EeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            455566666        99999999985431        12222111111222335778999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ..+..+++|||+.+|+|.++++.. ..+++..+..++
T Consensus       121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~  157 (325)
T 3kul_A          121 RGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML  157 (325)
T ss_dssp             GGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHH
T ss_pred             eCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHH
Confidence            999999999999999999999765 578887776554

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.40  E-value=4.5e-14  Score=96.22  Aligned_cols=99  Identities=11%  Similarity=0.125  Sum_probs=74.8

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|++.+.|        |.|+||.||++....     +++....  .......+.+|+.+++.++||||+++++++.+.
T Consensus         4 ~~~y~~~~~l--------G~G~~g~Vy~~~~~~~~~~~a~K~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~   73 (321)
T 1tki_A            4 YEKYMIAEDL--------GRGEFGIVHRCVETSSKKTYMAKFVKV--KGTDQVLVKKEISILNIARHRNILHLHESFESM   73 (321)
T ss_dssp             TTTEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEECC--CTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEET
T ss_pred             hhceEeeeEE--------ecCCCeEEEEEEECCCCcEEEEEEEec--CcccHHHHHHHHHHHHhCCCCCCCeEeEEEecC
Confidence            3467777778        999999999853210     1111111  112233567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +.++++||||++|+|.+++... ..+++..+..++
T Consensus        74 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~  108 (321)
T 1tki_A           74 EELVMIFEFISGLDIFERINTSAFELNEREIVSYV  108 (321)
T ss_dssp             TEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHH
T ss_pred             CEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHH
Confidence            9999999999999999999875 368888776654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.40  E-value=5.4e-14  Score=100.55  Aligned_cols=100  Identities=15%  Similarity=0.188  Sum_probs=75.6

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.|++++.|        |.|+||.||++...     .+++...... .......+.+|+.+++.++||||+++++++...
T Consensus        22 ~~y~~~~~l--------G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~   93 (486)
T 3mwu_A           22 ERYNIVCML--------GKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS   93 (486)
T ss_dssp             HHEEEEEEE--------ECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             cceEEeEEE--------eecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcC
Confidence            567777788        99999999985321     0111110000 011122467899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..+|++||||.+|+|.+++...+.+++..++.++
T Consensus        94 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~  127 (486)
T 3mwu_A           94 SSFYIVGELYTGGELFDEIIKRKRFSEHDAARII  127 (486)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             CEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999999888889988877654

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.39  E-value=2.4e-13  Score=92.76  Aligned_cols=89  Identities=20%  Similarity=0.253  Sum_probs=69.9

Q ss_pred             CCCCCCCchhHHHHHHHHHhhcCCCccccH------HhhhHHHHHHHHHhcC-CCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         30 PKLPAGIFTDSFRDFVDRCLKKNPSERADL------KTLSATTILKVLHECN-FAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        30 ~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------~~~~~~~e~~~~~~~~-h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      ..||.|+||.||++..     .......+.      ......+|+.++..+. ||||+++++++.+....|++||||++|
T Consensus        17 ~~lG~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~   91 (325)
T 3kn6_A           17 KPLGEGSFSICRKCVH-----KKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG   91 (325)
T ss_dssp             CCSEEETTEEEEEEEE-----TTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             CccccCCCeEEEEEEE-----CCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence            4569999999998432     222211111      1224568999999986 999999999999999999999999999


Q ss_pred             CHHHHHHHcCCCCHHHHhhhh
Q psy14717        103 SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|.+++...+.+++..++.++
T Consensus        92 ~L~~~l~~~~~~~~~~~~~i~  112 (325)
T 3kn6_A           92 ELFERIKKKKHFSETEASYIM  112 (325)
T ss_dssp             BHHHHHHHCSCCCHHHHHHHH
T ss_pred             cHHHHHHhcCCCCHHHHHHHH
Confidence            999999998889998877654

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.39  E-value=4.2e-14  Score=97.86  Aligned_cols=100  Identities=10%  Similarity=0.051  Sum_probs=75.4

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.|++.+.|        |.|+||.||++...     .+++........ .....+.+|+.+++.++||||+++++++...
T Consensus        29 ~~y~~~~~l--------G~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~  100 (362)
T 2bdw_A           29 DNYDVKEEL--------GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE  100 (362)
T ss_dssp             HHEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             cCeEEeeEE--------ecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC
Confidence            456677777        99999999985331     111111111111 1223567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +..|++||||.+|+|.+++.....+++..+..++
T Consensus       101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~  134 (362)
T 2bdw_A          101 SFHYLVFDLVTGGELFEDIVAREFYSEADASHCI  134 (362)
T ss_dssp             SEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHH
T ss_pred             CEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999887788888776654

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.39  E-value=2.8e-14  Score=98.61  Aligned_cols=104  Identities=16%  Similarity=0.179  Sum_probs=74.8

Q ss_pred             CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHHHHhc-CCCceeeee
Q psy14717         12 PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKVLHEC-NFAHIVGFY   83 (125)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~~~~~-~h~~iv~~~   83 (125)
                      ....+.|++++.|        |.|+||.||++....     +++.......  ......+.+|..++..+ +||+|++++
T Consensus        16 ~~~~~~y~~~~~l--------G~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~   87 (353)
T 2i0e_A           16 RMKLTDFNFLMVL--------GKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH   87 (353)
T ss_dssp             ---CTTEEEEEEE--------EEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEE
T ss_pred             CCchHHcEEEEEE--------eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEE
Confidence            3445678888888        999999999843210     1111000000  00112355788888876 899999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++.+.+.+|++|||+++|+|.+++.+.+.+++..++.++
T Consensus        88 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~  127 (353)
T 2i0e_A           88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYA  127 (353)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             EEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999999999999988889998877664

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.39  E-value=7.5e-14  Score=100.02  Aligned_cols=100  Identities=16%  Similarity=0.184  Sum_probs=71.6

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.|++++.|        |.|+||.||++...     .+++...... .......+.+|+.+++.++||||+++++++...
T Consensus        37 ~~y~~~~~l--------G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  108 (494)
T 3lij_A           37 EMYQRVKKL--------GSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDK  108 (494)
T ss_dssp             HHEEEEEEE--------ECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cCeEEeeEE--------ecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC
Confidence            357777777        99999999975331     0111111110 011123567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..+|++||||.+|+|.+++.....+++..++.++
T Consensus       109 ~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~  142 (494)
T 3lij_A          109 RNYYLVMECYKGGELFDEIIHRMKFNEVDAAVII  142 (494)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             CEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999887889988776654

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.39  E-value=1.5e-14  Score=99.58  Aligned_cols=101  Identities=48%  Similarity=0.622  Sum_probs=76.0

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|++++.|        |.|+||.||++...     .+++.............+.+|+.+++.++|+||+++++++..+
T Consensus        32 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  103 (360)
T 3eqc_A           32 DDDFEKISEL--------GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD  103 (360)
T ss_dssp             GGGEEEEEEE--------EECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET
T ss_pred             cccceeeeee--------cCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC
Confidence            3466677777        99999999985432     1111111111112223567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +..+++|||+++|+|.++++..+.+++..+..++
T Consensus       104 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~  137 (360)
T 3eqc_A          104 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS  137 (360)
T ss_dssp             TEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             CEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999988889988776654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.39  E-value=6.2e-14  Score=96.57  Aligned_cols=97  Identities=16%  Similarity=0.245  Sum_probs=74.4

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH------------HhhhHHHHHHHHHhc-CCCcee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL------------KTLSATTILKVLHEC-NFAHIV   80 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~~~~~~~-~h~~iv   80 (125)
                      ..+.|++++.|        |.|+||.||++..     +...+..+.            ......+|..++..+ +||||+
T Consensus        15 ~~~~y~~~~~l--------G~G~fg~V~~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv   81 (345)
T 1xjd_A           15 KIEDFILHKML--------GKGSFGKVFLAEF-----KKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLT   81 (345)
T ss_dssp             -CTTEEEEEEE--------EECSSSEEEEEEE-----TTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBC
T ss_pred             ChHHeEEEEEE--------eeCCCeEEEEEEE-----CCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCC
Confidence            44677888888        9999999998532     211111111            111355788888875 999999


Q ss_pred             eeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         81 GFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        81 ~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++++.+.+.+|++|||+++|+|.+++...+.+++..++.++
T Consensus        82 ~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~  124 (345)
T 1xjd_A           82 HMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA  124 (345)
T ss_dssp             CEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             cEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999999999999988889988877664

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.39  E-value=1.4e-13  Score=94.80  Aligned_cols=95  Identities=21%  Similarity=0.286  Sum_probs=72.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH--------------HhhhHHHHHHHHHhcCCCceee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL--------------KTLSATTILKVLHECNFAHIVG   81 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~--------------~~~~~~~e~~~~~~~~h~~iv~   81 (125)
                      +.|++.+.|        |.|+||.||++..     ....+..+.              ....+.+|+.+++.++||||++
T Consensus        24 ~~y~~~~~l--------G~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~   90 (351)
T 3c0i_A           24 DVYELCEVI--------GKGPFSVVRRCIN-----RETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE   90 (351)
T ss_dssp             HHEEEEEEE--------EECSSEEEEEEEE-----TTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cceEEeeEE--------eeCCCEEEEEEEE-----CCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCc
Confidence            567777778        9999999998532     111111111              1224678999999999999999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhhh
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~~  123 (125)
                      +++++...+.+|++||||++|+|.+++...    ..+++..+..++
T Consensus        91 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~  136 (351)
T 3c0i_A           91 LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYM  136 (351)
T ss_dssp             EEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred             EEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHH
Confidence            999999999999999999999999888654    247887766554

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.39  E-value=4.5e-14  Score=96.37  Aligned_cols=106  Identities=21%  Similarity=0.222  Sum_probs=74.5

Q ss_pred             CCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCcc---ccHHhhhHHHHHHHHHhcCCCc
Q psy14717         10 NVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSER---ADLKTLSATTILKVLHECNFAH   78 (125)
Q Consensus        10 ~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~---~~~~~~~~~~e~~~~~~~~h~~   78 (125)
                      +.....+.|++++.|        |.|+||.||++...        .+++......   .......+.+|+.+++.++|||
T Consensus        11 ~~~~~~~~y~~~~~l--------G~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~   82 (327)
T 3a62_A           11 PEKIRPECFELLRVL--------GKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPF   82 (327)
T ss_dssp             --CCCGGGEEEEEEE--------EEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTT
T ss_pred             CCCCCHHHeEEEEEE--------EeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCC
Confidence            344556789999999        99999999974321        1111111110   0111224567999999999999


Q ss_pred             eeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         79 IVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        79 iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      |+++++++...+.+|++|||+++|+|.+++...+.+++..+..++
T Consensus        83 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  127 (327)
T 3a62_A           83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYL  127 (327)
T ss_dssp             BCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHH
T ss_pred             ccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHH
Confidence            999999999999999999999999999999988888987776554

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.38  E-value=8e-14  Score=98.16  Aligned_cols=95  Identities=24%  Similarity=0.264  Sum_probs=71.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHH------------hhhHHHHHHHHHhcCCCceeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLK------------TLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~------------~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      +.|++++.|        |+|+||.||++..     +...+..+.+            ...+.+|..++..++|+||++++
T Consensus        61 ~~f~~~~~l--------G~G~fG~V~~~~~-----~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~  127 (412)
T 2vd5_A           61 DDFEILKVI--------GRGAFSEVAVVKM-----KQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH  127 (412)
T ss_dssp             GGEEEEEEE--------EECSSCEEEEEEE-----TTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEE
T ss_pred             hhEEEEEEE--------eeCCCeEEEEEEE-----CCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEE
Confidence            345555556        9999999998432     2222111111            11356799999999999999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +++.+.+.+|+|||||++|+|.+++.+. ..+++..++.++
T Consensus       128 ~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~  168 (412)
T 2vd5_A          128 FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYL  168 (412)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHH
T ss_pred             EEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHH
Confidence            9999999999999999999999999876 479988877654

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.38  E-value=1.2e-13  Score=93.21  Aligned_cols=100  Identities=16%  Similarity=0.216  Sum_probs=75.3

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|++.+.|        |.|+||.||++.+.     .+++... .........+.+|+.+++.++||||+++++++..+
T Consensus         9 ~~~~~~~~~l--------G~G~~g~V~~~~~~~~~~~va~K~~~-~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   79 (310)
T 3s95_A            9 PSDLIHGEVL--------GKGCFGQAIKVTHRETGEVMVMKELI-RFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD   79 (310)
T ss_dssp             GGGEEEEEEE--------ECCSSEEEEEEEETTTCCEEEEEEES-CCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred             hhHeecccee--------cCCCCEEEEEEEECCCCcEEEEEEec-cCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecC
Confidence            3567777788        99999999985432     1111111 11112233577899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ...+++|||+.+|+|.++++.. ..+++..+..++
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~  114 (310)
T 3s95_A           80 KRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFA  114 (310)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHH
T ss_pred             CeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHH
Confidence            9999999999999999999984 568877766554

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.38  E-value=2.7e-14  Score=97.43  Aligned_cols=88  Identities=19%  Similarity=0.237  Sum_probs=65.3

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      +.|++++.|        |.|+||.||++...          .+++.............+.+|+.+++.++||||++++++
T Consensus        47 ~~~~~~~~l--------g~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~  118 (343)
T 1luf_A           47 NNIEYVRDI--------GEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGV  118 (343)
T ss_dssp             GGCEEEEEE--------EECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             HHCeeeeee--------eecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            345555555        99999999985431          112221111111223357789999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      +...+..+++|||+++|+|.+++...
T Consensus       119 ~~~~~~~~lv~e~~~~~~L~~~l~~~  144 (343)
T 1luf_A          119 CAVGKPMCLLFEYMAYGDLNEFLRSM  144 (343)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHT
T ss_pred             EccCCceEEEEecCCCCcHHHHHHHh
Confidence            99999999999999999999999874

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.38  E-value=1.1e-13  Score=99.39  Aligned_cols=100  Identities=13%  Similarity=0.175  Sum_probs=73.3

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc------------HHhhhHHHHHHHHHhcCCCc
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD------------LKTLSATTILKVLHECNFAH   78 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~------------~~~~~~~~e~~~~~~~~h~~   78 (125)
                      +.|++++.|        |.|+||.||++...     .+++........            .....+.+|+.+++.++|||
T Consensus        36 ~~Y~~~~~l--------G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpn  107 (504)
T 3q5i_A           36 ESYFKVRKL--------GSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPN  107 (504)
T ss_dssp             GTEEEEEEE--------EC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTT
T ss_pred             cceEEEeEe--------cccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCC
Confidence            467777777        99999999975431     111111111000            11224678999999999999


Q ss_pred             eeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         79 IVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        79 iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      |+++++++.....+|+|||||++|+|.+++...+.+++..++.++
T Consensus       108 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~  152 (504)
T 3q5i_A          108 IIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIM  152 (504)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHH
T ss_pred             CCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHH
Confidence            999999999999999999999999999999888889988876654

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.38  E-value=2.9e-13  Score=91.45  Aligned_cols=90  Identities=12%  Similarity=0.090  Sum_probs=67.9

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHh-cCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHE-CNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~-~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      |.|+||.||++...     .+++..... .......+.+|+.++.. .+||||+++++++..++.+|++|||+++|+|.+
T Consensus        22 g~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~  100 (316)
T 2ac3_A           22 GEGAHARVQTCINLITSQEYAVKIIEKQ-PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILS  100 (316)
T ss_dssp             CCCSSEEEEEEECSSSCCEEEEEEEECC-SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHH
T ss_pred             cCCceEEEEEEEEcCCCcEEEEEEEeeC-cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHH
Confidence            99999999985321     111111111 11112356789999988 479999999999999999999999999999999


Q ss_pred             HHHHcCCCCHHHHhhhh
Q psy14717        107 ILKKAGKIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~~~~l~~~~~~~~~  123 (125)
                      ++...+.+++..++.++
T Consensus       101 ~l~~~~~~~~~~~~~i~  117 (316)
T 2ac3_A          101 HIHKRRHFNELEASVVV  117 (316)
T ss_dssp             HHHHHSSCCHHHHHHHH
T ss_pred             HHhccCCCCHHHHHHHH
Confidence            99988889988776554

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.38  E-value=6.4e-14  Score=97.04  Aligned_cols=101  Identities=20%  Similarity=0.253  Sum_probs=73.1

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHH-----H-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFV-----D-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .+.|++++.|        |.|+||.||++.+     .     .+++.............+.+|+.+++.++|+||+++++
T Consensus        70 ~~~~~~~~~L--------G~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~  141 (367)
T 3l9p_A           70 RKNITLIRGL--------GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG  141 (367)
T ss_dssp             GGGEEEEEEC--------CCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             HhHeEEeeEe--------eeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            3455666666        9999999998641     1     12222222112223335678999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHcC-------CCCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKAG-------KIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~~-------~l~~~~~~~~~  123 (125)
                      ++......+++||||.+|+|.++++..+       .+++..+..++
T Consensus       142 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~  187 (367)
T 3l9p_A          142 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA  187 (367)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHH
T ss_pred             EEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHH
Confidence            9999999999999999999999998753       36666555443

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.38  E-value=1.2e-14  Score=97.54  Aligned_cols=108  Identities=19%  Similarity=0.339  Sum_probs=65.3

Q ss_pred             CCCCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeee
Q psy14717          8 GSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus         8 ~~~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      ..+.....+.|++.+.|        |+|+||.||++...     .+++.............+.+|+.+++.++||||+++
T Consensus         7 ~~p~~i~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~   78 (303)
T 2vwi_A            7 ALPWSINRDDYELQEVI--------GSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSY   78 (303)
T ss_dssp             ------CCCCCEEEEEC--------C---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCE
T ss_pred             ccccccchhhhhhhhee--------ccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeE
Confidence            44445556688888888        99999999986432     112211111111112245678999999999999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHH--------cCCCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKK--------AGKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~--------~~~l~~~~~~~~~  123 (125)
                      ++++...+..+++|||+++|+|.+++..        ...+++..+..++
T Consensus        79 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~  127 (303)
T 2vwi_A           79 YTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATIL  127 (303)
T ss_dssp             EEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHH
T ss_pred             EEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHH
Confidence            9999999999999999999999999985        2457777766554

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.37  E-value=3.1e-15  Score=102.03  Aligned_cols=102  Identities=17%  Similarity=0.139  Sum_probs=75.9

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ..+.|++++.|        |.|+||.||++...     .+++.............+.+|+.+++.++|+||+++++++..
T Consensus         5 ~~~~y~i~~~l--------G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~   76 (323)
T 3tki_A            5 FVEDWDLVQTL--------GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRRE   76 (323)
T ss_dssp             TTTCEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HhhhceeeeEE--------ecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence            34578888888        99999999985321     111111111111112346789999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+..|++||||++|+|.+++.....+++..++.++
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~  111 (323)
T 3tki_A           77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF  111 (323)
T ss_dssp             SSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHH
T ss_pred             CCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHH
Confidence            99999999999999999999887789988877654

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.37  E-value=4.3e-14  Score=96.16  Aligned_cols=103  Identities=20%  Similarity=0.254  Sum_probs=74.0

Q ss_pred             CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceee
Q psy14717         12 PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVG   81 (125)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~   81 (125)
                      ......|++++.|        |.|+||.||++.+.          .+++.............+.+|+.+++.++||||++
T Consensus        26 ~~~~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   97 (327)
T 2yfx_A           26 EVPRKNITLIRGL--------GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR   97 (327)
T ss_dssp             BCCGGGCEEEEEC--------C--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cCChhheEEEEEE--------cCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCe
Confidence            3455678888888        99999999986421          12222221112223335778999999999999999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHcC-------CCCHHHHhhh
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKAG-------KIPEHILGTI  122 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~-------~l~~~~~~~~  122 (125)
                      +++++......|++|||+++|+|.+++....       .+++..+..+
T Consensus        98 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i  145 (327)
T 2yfx_A           98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV  145 (327)
T ss_dssp             EEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHH
T ss_pred             EEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHH
Confidence            9999999989999999999999999999863       3666555444

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.36  E-value=6.4e-14  Score=96.45  Aligned_cols=97  Identities=20%  Similarity=0.208  Sum_probs=68.8

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      +.|++.+.|        |.|+||.||++....     +++....   ......+.+|+.+++.+.|+||+++++++..+.
T Consensus        53 ~~y~~~~~l--------G~G~~g~Vy~~~~~~~~~~vavK~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~  121 (349)
T 2w4o_A           53 DFFEVESEL--------GRGATSIVYRCKQKGTQKPYALKVLKK---TVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPT  121 (349)
T ss_dssp             GTEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSS
T ss_pred             CcEEEeeEE--------eeCCCEEEEEEEECCCCcEEEEEEecc---chhHHHHHHHHHHHHhCCCCCCcceeeeEecCC
Confidence            346666667        999999999853210     1111000   111224567999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .++++|||+++|+|.+++...+.+++..+..++
T Consensus       122 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~  154 (349)
T 2w4o_A          122 EISLVLELVTGGELFDRIVEKGYYSERDAADAV  154 (349)
T ss_dssp             EEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHH
T ss_pred             eEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence            999999999999999999887788888776554

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.36  E-value=6.1e-14  Score=95.71  Aligned_cols=91  Identities=15%  Similarity=0.217  Sum_probs=68.4

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH------------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCcee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD------------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIV   80 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv   80 (125)
                      +.+.|++.+.|        |.|+||.||++...            .+++.............+.+|+.+++.+ +||||+
T Consensus        33 ~~~~y~~~~~l--------G~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv  104 (334)
T 2pvf_A           33 PRDKLTLGKPL--------GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNII  104 (334)
T ss_dssp             CGGGEEEEEEE--------EECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             CHhHeEEeeEE--------eecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEe
Confidence            34677888888        99999999975321            1222222111112223567899999998 899999


Q ss_pred             eeeeeEEeCCeEEEEEEecCCCCHHHHHHHcC
Q psy14717         81 GFYGAFISDQDISICMEYMDGGSLDLILKKAG  112 (125)
Q Consensus        81 ~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~  112 (125)
                      ++++++...+.++++|||+.+|+|.+++....
T Consensus       105 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  136 (334)
T 2pvf_A          105 NLLGACTQDGPLYVIVEYASKGNLREYLRARR  136 (334)
T ss_dssp             CEEEEECSSSCCEEEEECCTTCBHHHHHHTTS
T ss_pred             eEEEEEccCCceEEEEECCCCCcHHHHHHHhc
Confidence            99999999999999999999999999998753

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.36  E-value=6.6e-14  Score=97.39  Aligned_cols=103  Identities=17%  Similarity=0.202  Sum_probs=69.5

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccc--cHHhhhHHHHHHH-HHhcCCCceeeeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERA--DLKTLSATTILKV-LHECNFAHIVGFYG   84 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~--~~~~~~~~~e~~~-~~~~~h~~iv~~~~   84 (125)
                      ...+.|++++.|        |+|+||.||++....     +++.......  ......+.+|..+ ++.++||||+++++
T Consensus        35 ~~~~~y~~~~~l--------G~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~  106 (373)
T 2r5t_A           35 AKPSDFHFLKVI--------GKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHF  106 (373)
T ss_dssp             CCGGGEEEEEEE--------ECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEE
T ss_pred             CChhheEEEEEE--------eeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEE
Confidence            345678888888        999999999853210     1111111100  0111133456555 45689999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++.+.+.+|++|||+++|+|.+++.+.+.+++..++.++
T Consensus       107 ~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~  145 (373)
T 2r5t_A          107 SFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYA  145 (373)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             EEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            999999999999999999999999988889998877654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.36  E-value=2.6e-14  Score=99.26  Aligned_cols=101  Identities=19%  Similarity=0.224  Sum_probs=74.4

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|++.+.|        |.|+||.||++...     .+++.............+.+|+.+++.++||||+++++++...
T Consensus       113 ~~~~~~~~~l--------G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~  184 (377)
T 3cbl_A          113 HEDLVLGEQI--------GRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK  184 (377)
T ss_dssp             GGGEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred             hHHeEEeeEe--------ccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC
Confidence            3566666777        99999999986432     1222211111112223567899999999999999999999998


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +.++++||||++|+|.++++.. ..+++..+..++
T Consensus       185 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  219 (377)
T 3cbl_A          185 QPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMV  219 (377)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHH
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHH
Confidence            8999999999999999999875 358877766554

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.36  E-value=5e-14  Score=97.92  Aligned_cols=101  Identities=15%  Similarity=0.170  Sum_probs=74.3

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH------------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD------------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVG   81 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~   81 (125)
                      .+.|++.+.|        |+|+||.||++...            .+++.............+.+|+.+++.+ +||||++
T Consensus        68 ~~~y~i~~~L--------G~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~  139 (382)
T 3tt0_A           68 RDRLVLGKPL--------GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIIN  139 (382)
T ss_dssp             GGGEEEEEEE--------EECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             hhheEeeeEE--------ecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhh
Confidence            3566777777        99999999985421            1122111111112223567899999998 9999999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHcC----------------CCCHHHHhhhh
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKAG----------------KIPEHILGTIT  123 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~----------------~l~~~~~~~~~  123 (125)
                      +++++...+.++++|||+.+|+|.+++....                .+++..+..++
T Consensus       140 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  197 (382)
T 3tt0_A          140 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA  197 (382)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHH
T ss_pred             heeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHH
Confidence            9999999999999999999999999999853                37777766554

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.35  E-value=2.2e-14  Score=95.80  Aligned_cols=101  Identities=20%  Similarity=0.183  Sum_probs=74.8

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH------------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR------------CLKKNPSERADLKTLSATTILKVLHECNFAHIVG   81 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~------------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~   81 (125)
                      ..+.|++.+.|        |.|+||.||++....            +++.... ........+.+|+.+++.++||||++
T Consensus         6 ~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~   76 (289)
T 4fvq_A            6 RNEDLIFNESL--------GQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDK-AHRNYSESFFEAASMMSKLSHKHLVL   76 (289)
T ss_dssp             CGGGEEEEEEE--------EEETTEEEEEEEEEEECGGGCEEEEEEEEEEECG-GGGGGHHHHHHHHHHHHTSCCTTBCC
T ss_pred             chhHeeeeeee--------ccCCCceEEEEEEecccccccccchhhhhhhccc-ccHHHHHHHHHHHHHHHhCCCCCEeE
Confidence            34577777888        999999999853210            1111111 11112235678999999999999999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHcCC-CCHHHHhhhh
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKAGK-IPEHILGTIT  123 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~-l~~~~~~~~~  123 (125)
                      +++++..++..+++|||+.+|+|.+++..... +++..+..++
T Consensus        77 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~  119 (289)
T 4fvq_A           77 NYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVA  119 (289)
T ss_dssp             EEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHH
T ss_pred             EEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHH
Confidence            99999999999999999999999999988643 8887766554

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.35  E-value=2.6e-13  Score=90.30  Aligned_cols=100  Identities=16%  Similarity=0.193  Sum_probs=74.6

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-----cHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-----DLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-----~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      +.|++.+.|        |.|+||.||++...     .+++.......     ......+.+|+.+++.++||||++++++
T Consensus         5 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   76 (283)
T 3bhy_A            5 DHYEMGEEL--------GSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDI   76 (283)
T ss_dssp             HHEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             hhhhhHHhh--------cccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhhe
Confidence            456677777        99999999985331     01111110000     0112356789999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +......+++|||+++|+|.+++.....+++..+..++
T Consensus        77 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  114 (283)
T 3bhy_A           77 FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFL  114 (283)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             ecCCCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            99999999999999999999999887789988776654

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.35  E-value=4.3e-14  Score=96.16  Aligned_cols=103  Identities=17%  Similarity=0.226  Sum_probs=75.2

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-------HhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-------CLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYG   84 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-------~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~   84 (125)
                      ...+.|++.+.|        |.|+||.||++....       +++.............+.+|+.+++.+ +||||+++++
T Consensus        22 ~~~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~   93 (327)
T 1fvr_A           22 LDWNDIKFQDVI--------GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG   93 (327)
T ss_dssp             CCGGGCEEEEEE--------ECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEE
T ss_pred             ccHHHccceeee--------ecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhce
Confidence            455788888888        999999999854210       111111111111222567899999999 9999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHcC----------------CCCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKAG----------------KIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~~----------------~l~~~~~~~~~  123 (125)
                      ++...+.++++|||+++|+|.+++....                .+++..+..++
T Consensus        94 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  148 (327)
T 1fvr_A           94 ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA  148 (327)
T ss_dssp             EEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHH
T ss_pred             eeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHH
Confidence            9999999999999999999999998753                57777766554

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.35  E-value=5.1e-14  Score=94.96  Aligned_cols=91  Identities=21%  Similarity=0.274  Sum_probs=68.7

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      ....|++.+.|        |.|+||.||++.+.          .+++.............+.+|+.+++.++||||++++
T Consensus        21 ~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~   92 (314)
T 2ivs_A           21 PRKNLVLGKTL--------GEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLY   92 (314)
T ss_dssp             CGGGEEEEEEE--------EECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred             chhheeeeeee--------cccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEE
Confidence            34577777788        99999999986421          1122222111112223567899999999999999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHcC
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKAG  112 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~~  112 (125)
                      +++...+..+++|||+++|+|.+++....
T Consensus        93 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  121 (314)
T 2ivs_A           93 GACSQDGPLLLIVEYAKYGSLRGFLRESR  121 (314)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTT
T ss_pred             EEEecCCceEEEEeecCCCCHHHHHHHHh
Confidence            99999999999999999999999998754

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.34  E-value=4.9e-14  Score=94.28  Aligned_cols=100  Identities=18%  Similarity=0.269  Sum_probs=73.8

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      +.|++.+.|        |.|+||.||++....     +++.............+.+|+.+++.++||||+++++++....
T Consensus        22 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   93 (285)
T 3is5_A           22 DLFIFKRKL--------GSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH   93 (285)
T ss_dssp             HHEEEEEEE--------EECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred             hheeeccee--------ccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCC
Confidence            577777888        999999999743210     1111111111111235678999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~~  123 (125)
                      ..+++|||+++|+|.+++...    ..+++..+..++
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~  130 (285)
T 3is5_A           94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELM  130 (285)
T ss_dssp             EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred             eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHH
Confidence            999999999999999998653    568887776654

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.34  E-value=7.1e-14  Score=92.61  Aligned_cols=101  Identities=16%  Similarity=0.229  Sum_probs=75.9

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ...+.|++++.|        |.|+||.||++...    .+++......  .....+.+|+.+++.++||||+++++++..
T Consensus         7 i~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   76 (269)
T 4hcu_A            7 IDPSELTFVQEI--------GSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLE   76 (269)
T ss_dssp             CCGGGEEEEEEE--------EECSSCEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             eChhhceeehee--------cCCCccEEEEEEecCCCeEEEEEecccc--cCHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence            345678888888        99999999985431    1111111111  112256789999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .+..+++|||+++|+|.+++... ..+++..+..++
T Consensus        77 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~  112 (269)
T 4hcu_A           77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC  112 (269)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHH
T ss_pred             CCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHH
Confidence            99999999999999999999764 457887766554

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.34  E-value=2.1e-13  Score=90.51  Aligned_cols=103  Identities=18%  Similarity=0.182  Sum_probs=75.8

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH-------HhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL-------KTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~-------~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      ...+.|++.+.|        |.|+||.||.+.....-+....+....       ....+.+|+.+++.++|+||++++++
T Consensus         8 ~~~~~y~i~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   79 (276)
T 2h6d_A            8 VKIGHYVLGDTL--------GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQV   79 (276)
T ss_dssp             CEETTEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             ceeccEEEEeee--------cCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEE
Confidence            344678888888        999999999853210000000111100       01245689999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +......+++|||+++|+|.+++...+.+++..+..++
T Consensus        80 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  117 (276)
T 2h6d_A           80 ISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLF  117 (276)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHH
T ss_pred             EecCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHH
Confidence            99999999999999999999999988888887766554

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.34  E-value=8.6e-14  Score=99.60  Aligned_cols=102  Identities=20%  Similarity=0.210  Sum_probs=76.5

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH-------HhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL-------KTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~-------~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      ..+.|++.+.|        |.|+||.||++.+...-+....+....       ....+.+|+.+++.++||||+++++++
T Consensus        14 ~~~~Y~l~~~L--------G~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~   85 (476)
T 2y94_A           14 KIGHYILGDTL--------GVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI   85 (476)
T ss_dssp             EETTEEEEEEE--------ECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             eecCEEEEEEE--------eeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence            45678888888        999999999853210000000111100       112466899999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ...+.+|++|||+++|+|.+++...+.+++..++.++
T Consensus        86 ~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~  122 (476)
T 2y94_A           86 STPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLF  122 (476)
T ss_dssp             ECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHH
T ss_pred             EECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999999999887889988877654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.34  E-value=2.3e-14  Score=94.64  Aligned_cols=103  Identities=12%  Similarity=0.075  Sum_probs=76.7

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ...+.|++.+.|        |.|+||.||++...   .+++...... .......+.+|+.+++.++||||+++++++..
T Consensus         7 i~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   78 (271)
T 3kmu_A            7 IDFKQLNFLTKL--------NENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS   78 (271)
T ss_dssp             CCGGGCEEEEEE--------EEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECT
T ss_pred             CCHHHhHHHHHh--------cCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEcc
Confidence            445678888888        99999999986432   1122211111 11223357789999999999999999999988


Q ss_pred             C--CeEEEEEEecCCCCHHHHHHHcC--CCCHHHHhhhh
Q psy14717         89 D--QDISICMEYMDGGSLDLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus        89 ~--~~~~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~~  123 (125)
                      +  ...+++|||+++|+|.+++....  .+++..+..++
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~  117 (271)
T 3kmu_A           79 PPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFA  117 (271)
T ss_dssp             TTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHH
T ss_pred             CCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHH
Confidence            7  77999999999999999998864  47887776654

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.34  E-value=1.5e-13  Score=93.70  Aligned_cols=104  Identities=11%  Similarity=0.243  Sum_probs=75.6

Q ss_pred             CCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         11 VPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        11 ~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .....+.|++++.|        |.|+||.||++...     .+++........ .....+.+|+.+++.++|+||+++++
T Consensus        29 ~~~~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~  100 (329)
T 3gbz_A           29 SATSIDRYRRITKL--------GEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKS  100 (329)
T ss_dssp             ---CGGGEEEEEEE--------EECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEE
T ss_pred             cccchhhEEEEEEE--------EecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEE
Confidence            33455688888888        99999999986321     122222211111 11224568999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++..++.++++|||+.+ +|.+++.....+++..++.++
T Consensus       101 ~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~  138 (329)
T 3gbz_A          101 VIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFL  138 (329)
T ss_dssp             EEEETTEEEEEEECCSE-EHHHHHHHCTTCCHHHHHHHH
T ss_pred             EEecCCEEEEEEecCCC-CHHHHHhhcCCCCHHHHHHHH
Confidence            99999999999999996 999999998889988876654

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.34  E-value=7.2e-14  Score=93.16  Aligned_cols=106  Identities=18%  Similarity=0.145  Sum_probs=76.0

Q ss_pred             CCCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCcee
Q psy14717          9 SNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIV   80 (125)
Q Consensus         9 ~~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv   80 (125)
                      .......+.|++.+.|        |.|+||.||++...        .+++.............+.+|+.+++.++||||+
T Consensus         8 ~~~~~~~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv   79 (281)
T 1mp8_A            8 RDYEIQRERIELGRCI--------GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIV   79 (281)
T ss_dssp             -CCBCCGGGEEEEEEE--------EECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBC
T ss_pred             cceEEehHHeEEEeEe--------eecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccc
Confidence            3445566788888899        99999999985321        1112111111112233567899999999999999


Q ss_pred             eeeeeEEeCCeEEEEEEecCCCCHHHHHHHcC-CCCHHHHhhhh
Q psy14717         81 GFYGAFISDQDISICMEYMDGGSLDLILKKAG-KIPEHILGTIT  123 (125)
Q Consensus        81 ~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~-~l~~~~~~~~~  123 (125)
                      ++++++ ..+..|++|||+++|+|.+++.... .+++..+..++
T Consensus        80 ~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  122 (281)
T 1mp8_A           80 KLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA  122 (281)
T ss_dssp             CEEEEE-CSSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHH
T ss_pred             eEEEEE-ccCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHH
Confidence            999987 4556899999999999999998753 58877766543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.33  E-value=2.2e-13  Score=92.55  Aligned_cols=101  Identities=11%  Similarity=0.169  Sum_probs=75.9

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-----cHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-----DLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-----~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .+.|++.+.|        |.|+||.||++...     .+++.......     ......+.+|+.+++.+.||||+++++
T Consensus        11 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   82 (321)
T 2a2a_A           11 EDFYDIGEEL--------GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHD   82 (321)
T ss_dssp             HHHEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             hccEEEeeEe--------eecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEE
Confidence            4578888888        99999999985331     11111111000     011234678999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++......+++|||+++|+|.+++.....+++..+..++
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~  121 (321)
T 2a2a_A           83 VYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFI  121 (321)
T ss_dssp             EEECSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHH
T ss_pred             EEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            999999999999999999999999987778887776554

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.33  E-value=1.6e-13  Score=97.98  Aligned_cols=101  Identities=14%  Similarity=0.099  Sum_probs=76.7

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc--ccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER--ADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .+.|++.+.|        |.|+||.||++...     .+++......  .......+.+|+.+++.++||||+++++++.
T Consensus        25 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~   96 (484)
T 3nyv_A           25 SDRYKGQRVL--------GKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFE   96 (484)
T ss_dssp             HHHEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             cCceEEeeEE--------ecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence            3567777788        99999999975332     1122111110  0112235678999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ....+|++||||.+|+|.+++...+.+++..++.++
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~  132 (484)
T 3nyv_A           97 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARII  132 (484)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHH
T ss_pred             eCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence            999999999999999999999988889988776654

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.33  E-value=3.1e-13  Score=89.94  Aligned_cols=103  Identities=17%  Similarity=0.209  Sum_probs=76.6

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccH--HhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADL--KTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~--~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      ...+.|++.+.|        |.|+||.||++....     +++.........  ....+.+|+.+++.++||||++++++
T Consensus         6 ~~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   77 (279)
T 3fdn_A            6 WALEDFEIGRPL--------GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY   77 (279)
T ss_dssp             CCGGGEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             eecccEEEeeEE--------ecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhhe
Confidence            345688888888        999999999853211     011000000000  11246689999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +......+++|||+++|+|.+++.....+++..+..++
T Consensus        78 ~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~  115 (279)
T 3fdn_A           78 FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI  115 (279)
T ss_dssp             EECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHH
T ss_pred             EecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            99999999999999999999999988889988776554

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.33  E-value=6.1e-14  Score=99.30  Aligned_cols=96  Identities=20%  Similarity=0.254  Sum_probs=68.8

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH------------HhhhHHHHHHHHHhcCCCceeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL------------KTLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      .+.|++++.|        |.|+||.||++..     .......+.            ....+.+|+.+++.++||||+++
T Consensus       147 ~~~y~~~~~l--------G~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l  213 (446)
T 4ejn_A          147 MNEFEYLKLL--------GKGTFGKVILVKE-----KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL  213 (446)
T ss_dssp             GGGEEEEEEE--------EEETTEEEEEEEE-----TTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCE
T ss_pred             hHHcEEeEEE--------eeCcCEEEEEEEE-----cCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeE
Confidence            4567777777        9999999997432     111111111            11235578888889999999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++...+.+++|||||++|+|.+++...+.+++..++.++
T Consensus       214 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  254 (446)
T 4ejn_A          214 KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYG  254 (446)
T ss_dssp             EEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHH
T ss_pred             EEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            99999999999999999999999999988889988877654

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.33  E-value=1.9e-13  Score=92.46  Aligned_cols=103  Identities=14%  Similarity=0.122  Sum_probs=76.5

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc--HHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD--LKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~--~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      ...+.|++.+.|        |.|+||.||++...     .+++........  .....+.+|+.++..++||||++++++
T Consensus        31 ~~~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~  102 (309)
T 2h34_A           31 TQFGPYRLRRLV--------GRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDF  102 (309)
T ss_dssp             ---CCEEEEEEE--------EECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred             cEeccEEEEEEE--------cCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEE
Confidence            344578888888        99999999985421     112211111111  112356789999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +..++.++++|||+++|+|.++++..+.+++..+..++
T Consensus       103 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~  140 (309)
T 2h34_A          103 GEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIV  140 (309)
T ss_dssp             EEETTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHH
T ss_pred             EeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHH
Confidence            99999999999999999999999988889988776654

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.32  E-value=3.9e-14  Score=97.28  Aligned_cols=91  Identities=16%  Similarity=0.208  Sum_probs=66.5

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHH-----H-----HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFV-----D-----RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGF   82 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~-----~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~   82 (125)
                      +.+.|++.+.|        |.|+||.||++.+     .     .+++.............+.+|+.++..+ +||||+++
T Consensus        20 ~~~~y~~~~~l--------G~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~   91 (359)
T 3vhe_A           20 PRDRLKLGKPL--------GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   91 (359)
T ss_dssp             CGGGEEEEEEE--------EECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cccceeeceee--------cCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence            45677777888        9999999998631     0     1222211111112223577899999998 89999999


Q ss_pred             eeeEEeCCe-EEEEEEecCCCCHHHHHHHcC
Q psy14717         83 YGAFISDQD-ISICMEYMDGGSLDLILKKAG  112 (125)
Q Consensus        83 ~~~~~~~~~-~~iv~e~~~~GsL~~~l~~~~  112 (125)
                      ++++...+. ++++||||++|+|.++++...
T Consensus        92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~  122 (359)
T 3vhe_A           92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKR  122 (359)
T ss_dssp             EEEECSTTSCCEEEEECCTTEEHHHHHHTTT
T ss_pred             eeeeecCCCceEEEEEecCCCcHHHHHHhcc
Confidence            999987554 999999999999999998753

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.32  E-value=4e-13  Score=90.03  Aligned_cols=103  Identities=12%  Similarity=0.089  Sum_probs=76.3

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCcc---c-----cHHhhhHHHHHHHHHhcC-CCc
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSER---A-----DLKTLSATTILKVLHECN-FAH   78 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~---~-----~~~~~~~~~e~~~~~~~~-h~~   78 (125)
                      ...+.|++.+.|        |.|+||.||++....     +++......   .     ......+.+|+.+++.+. |||
T Consensus        14 ~~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~   85 (298)
T 1phk_A           14 GFYENYEPKEIL--------GRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPN   85 (298)
T ss_dssp             -CTTTEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred             chhhccceeeee--------cCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence            345678888888        999999999854321     111111100   0     011224668999999985 999


Q ss_pred             eeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         79 IVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        79 iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      |+++++++......+++|||+++|+|.+++.....+++..+..++
T Consensus        86 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  130 (298)
T 1phk_A           86 IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM  130 (298)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             EeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHH
Confidence            999999999999999999999999999999987788888776554

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.32  E-value=6.6e-14  Score=94.36  Aligned_cols=92  Identities=21%  Similarity=0.149  Sum_probs=69.0

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVG   81 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~   81 (125)
                      .+.+.|++.+.|        |.|+||.||++.+.          .+++.............+.+|+.+++.+ +||||++
T Consensus        20 ~~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~   91 (313)
T 1t46_A           20 FPRNRLSFGKTL--------GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN   91 (313)
T ss_dssp             CCGGGEEEEEEE--------EECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             cChhhhhHHHhh--------CccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeee
Confidence            445678888888        99999999985320          1111111111112233567899999999 9999999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHcC
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKAG  112 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~  112 (125)
                      +++++..++..+++|||+++|+|.+++....
T Consensus        92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  122 (313)
T 1t46_A           92 LLGACTIGGPTLVITEYCCYGDLLNFLRRKR  122 (313)
T ss_dssp             EEEEECSSSSCEEEEECCTTEEHHHHHHHTT
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcc
Confidence            9999999999999999999999999998753

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.32  E-value=1.5e-13  Score=94.37  Aligned_cols=96  Identities=16%  Similarity=0.234  Sum_probs=74.8

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH------------HhhhHHHHHHHHHhcCCCceee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL------------KTLSATTILKVLHECNFAHIVG   81 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~~~~~~~~h~~iv~   81 (125)
                      ..+.|++.+.|        |.|+||.||++.+.     ......+.            ....+.+|+.+++.++||||++
T Consensus         7 ~i~~Y~i~~~l--------G~G~~g~V~~a~~~-----~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~   73 (336)
T 3h4j_B            7 HIGPYIIRETL--------GEGSFGKVKLATHY-----KTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIK   73 (336)
T ss_dssp             EETTEEEEEEE--------EEETTEEEEEEEET-----TTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCC
T ss_pred             ccCCEEEEEEE--------ecCCCeEEEEEEEC-----CCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCe
Confidence            34578888888        99999999985431     11111111            0124678999999999999999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++++..+..++++|||+ +|+|.+++...+.+++..++.++
T Consensus        74 l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~  114 (336)
T 3h4j_B           74 LYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFF  114 (336)
T ss_dssp             EEEEEECSSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHH
T ss_pred             EEEEEEeCCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHH
Confidence            999999999999999999 67999999888889988877654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.32  E-value=3.1e-13  Score=98.66  Aligned_cols=96  Identities=17%  Similarity=0.217  Sum_probs=72.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH------------HhhhHHHHHHHHHhcCCCceeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL------------KTLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      .+.|+.++.|        |.|+||.||++..     +......+.            ....+.+|+.++..++||||+++
T Consensus       183 ~~~f~~~~~L--------G~G~fG~Vy~a~~-----~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l  249 (576)
T 2acx_A          183 KNTFRQYRVL--------GKGGFGEVCACQV-----RATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSL  249 (576)
T ss_dssp             GGGEEEEEEE--------EEETTEEEEEEEE-----TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccceEEEEEE--------eeCCCEEEEEEEE-----CCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeE
Confidence            3455555666        9999999998432     211111111            11235689999999999999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcC--CCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~~  123 (125)
                      ++++.+.+.+|+|||||++|+|.+++...+  .+++..++.++
T Consensus       250 ~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~  292 (576)
T 2acx_A          250 AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYA  292 (576)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHH
T ss_pred             EEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHH
Confidence            999999999999999999999999998754  38888877654

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.32  E-value=4.2e-13  Score=96.32  Aligned_cols=99  Identities=13%  Similarity=0.204  Sum_probs=73.6

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|++.+.|        |.|+||.||++.+.     .+++.....  ......+.+|+.+++.++||||+++++++...
T Consensus       219 ~~~~~~~~~l--------G~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~  288 (495)
T 1opk_A          219 RTDITMKHKL--------GGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE  288 (495)
T ss_dssp             GGGEEEEEES--------GGGTTSSEEEEEEGGGTEEEEEEECCSS--SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HHHceeeeEe--------cCCCCeEEEEEEEcCCCeEEEEEEecCc--ccchHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence            3456666677        99999999986432     112221111  11223577899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      ..++|+||||++|+|.++++..  ..+++..+..++
T Consensus       289 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~  324 (495)
T 1opk_A          289 PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA  324 (495)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHH
T ss_pred             CcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHH
Confidence            9999999999999999999875  347777665543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.32  E-value=5.2e-14  Score=96.23  Aligned_cols=89  Identities=18%  Similarity=0.182  Sum_probs=65.4

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFY   83 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~   83 (125)
                      .+.|++.+.|        |.|+||.||++.+.          .+++.............+.+|+.++..+ .||||++++
T Consensus        44 ~~~y~~~~~l--------G~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~  115 (344)
T 1rjb_A           44 RENLEFGKVL--------GSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLL  115 (344)
T ss_dssp             GGGEEEEEEE--------EECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             HHHceeeeee--------cCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence            3566666777        99999999985421          1122111111111223567899999999 899999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      +++...+.++++|||+++|+|.+++...
T Consensus       116 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~  143 (344)
T 1rjb_A          116 GACTLSGPIYLIFEYCCYGDLLNYLRSK  143 (344)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHTT
T ss_pred             EEEeeCCccEEEEecCCCCcHHHHHhhc
Confidence            9999999999999999999999999875

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.32  E-value=2.7e-13  Score=91.39  Aligned_cols=100  Identities=19%  Similarity=0.291  Sum_probs=74.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.|++++.|        |.|+||.||++...     .+++....... ......+.+|+.+++.++|+||+++++++...
T Consensus         3 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   74 (311)
T 4agu_A            3 EKYEKIGKI--------GEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRK   74 (311)
T ss_dssp             CCEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             ccceEeeEE--------eecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecC
Confidence            356667777        99999999985432     11221111111 11223466899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +..+++|||+++++|.++++..+.+++..+..++
T Consensus        75 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~  108 (311)
T 4agu_A           75 RRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSIT  108 (311)
T ss_dssp             TEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHH
T ss_pred             CeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHH
Confidence            9999999999999999999887789988776654

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.31  E-value=4.1e-13  Score=89.22  Aligned_cols=101  Identities=21%  Similarity=0.312  Sum_probs=75.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCc-cccHHhhhHHHHHHHHHhc-CCCceeeeeeeEE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSE-RADLKTLSATTILKVLHEC-NFAHIVGFYGAFI   87 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~-~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~   87 (125)
                      .+.|++++.|        |.|+||.||++...     .+++..... ........+.+|+..+..+ +||||+++++++.
T Consensus        10 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~   81 (289)
T 1x8b_A           10 TTEFHELEKI--------GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWA   81 (289)
T ss_dssp             HHHEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEE
T ss_pred             cchhhhhhhh--------cCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeee
Confidence            4577777888        99999999985432     111111111 1122333567889888888 9999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~~  123 (125)
                      .++..+++|||+++|+|.+++...    ..+++..+..++
T Consensus        82 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~  121 (289)
T 1x8b_A           82 EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLL  121 (289)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred             cCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHH
Confidence            999999999999999999999875    568888776654

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.31  E-value=4.4e-13  Score=91.35  Aligned_cols=105  Identities=13%  Similarity=0.142  Sum_probs=79.0

Q ss_pred             CCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         11 VPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        11 ~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      +...++.|++++.|        |.|+||.||++...     .+++....... ......+.+|+.+++.++|+||+++++
T Consensus        20 ~~~~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   91 (331)
T 4aaa_A           20 YFQSMEKYENLGLV--------GEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLE   91 (331)
T ss_dssp             CCBCGGGEEEEEEG--------GGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             hhhhhhhheeeeEE--------eecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEE
Confidence            33466788899999        99999999985432     11111111111 112224568999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++......+++|||+.+++|.+++.....+++..+..++
T Consensus        92 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~  130 (331)
T 4aaa_A           92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYL  130 (331)
T ss_dssp             EEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHH
T ss_pred             EeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHH
Confidence            999999999999999999999988877788888776654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.31  E-value=9.1e-14  Score=94.99  Aligned_cols=92  Identities=17%  Similarity=0.316  Sum_probs=68.8

Q ss_pred             CCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         32 LPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        32 lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      ||+|+||.||++...         .+++.............+.+|+.+++.++||||+++++++...+..+++|||+++|
T Consensus        52 lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  131 (333)
T 1mqb_A           52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENG  131 (333)
T ss_dssp             EEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTE
T ss_pred             EecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCC
Confidence            399999999985321         11221111111122335778999999999999999999999999999999999999


Q ss_pred             CHHHHHHHc-CCCCHHHHhhhh
Q psy14717        103 SLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +|.+++... ..+++..+..++
T Consensus       132 ~L~~~l~~~~~~~~~~~~~~i~  153 (333)
T 1mqb_A          132 ALDKFLREKDGEFSVLQLVGML  153 (333)
T ss_dssp             EHHHHHHHTTTCSCHHHHHHHH
T ss_pred             cHHHHHHhCCCCCCHHHHHHHH
Confidence            999999875 568887766554

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.31  E-value=3.4e-13  Score=90.35  Aligned_cols=102  Identities=16%  Similarity=0.136  Sum_probs=76.0

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCcc--ccHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSER--ADLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      ....|++.+.|        |+|+||.||++....     +++......  .......+.+|+.+++.+.|+||+++++++
T Consensus        13 ~~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   84 (294)
T 2rku_A           13 SRRRYVRGRFL--------GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF   84 (294)
T ss_dssp             TTEEEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             cccceEEEEEE--------eecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeee
Confidence            34567777888        999999999853310     111111110  011223566899999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ...+..+++|||+.+|+|.+++.....+++..+..++
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~  121 (294)
T 2rku_A           85 EDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL  121 (294)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHH
T ss_pred             ccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999999999987889988776654

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.31  E-value=1.3e-13  Score=97.79  Aligned_cols=97  Identities=21%  Similarity=0.282  Sum_probs=70.5

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC-e
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ-D   91 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~-~   91 (125)
                      +.|++++.|        |.|+||.||++...   .+++.....   .....+.+|+.+++.++||||+++++++.... .
T Consensus       193 ~~~~~~~~l--------G~G~fg~V~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~  261 (450)
T 1k9a_A          193 KELKLLQTI--------GKGEFGDVMLGDYRGNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGG  261 (450)
T ss_dssp             GGEEEEEEE--------EECSSEEEEEEEETTEEEEEEEESSC---TTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSC
T ss_pred             HHeEEEeee--------cCcCCeeEEEEEecCCeEEEEEeCCc---hHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCc
Confidence            455555666        99999999985432   111111111   12235678999999999999999999987765 7


Q ss_pred             EEEEEEecCCCCHHHHHHHcCC--CCHHHHhhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKAGK--IPEHILGTIT  123 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~~~--l~~~~~~~~~  123 (125)
                      ++|+||||++|+|.++++..+.  +++..+..++
T Consensus       262 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~  295 (450)
T 1k9a_A          262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS  295 (450)
T ss_dssp             EEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHH
T ss_pred             eEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHH
Confidence            9999999999999999997643  6777665544

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.31  E-value=2.7e-13  Score=92.63  Aligned_cols=100  Identities=16%  Similarity=0.143  Sum_probs=74.3

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCcc--ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSER--ADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ..|++.+.|        |+|+||.||++....     +++......  .......+.+|+.+++.+.|+||+++++++.+
T Consensus        41 ~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  112 (335)
T 2owb_A           41 RRYVRGRFL--------GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED  112 (335)
T ss_dssp             EEEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred             CceEEEEEE--------eeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence            356666667        999999999853210     111111100  01122356789999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+.++++|||+.+++|.+++.....+++..+..++
T Consensus       113 ~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~  147 (335)
T 2owb_A          113 NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYL  147 (335)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHH
T ss_pred             CCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHH
Confidence            99999999999999999999987889988776654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.31  E-value=4.4e-13  Score=90.24  Aligned_cols=100  Identities=18%  Similarity=0.223  Sum_probs=74.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|++.+.|        |.|+||.||++...     .+++..... .......+.+|+.+++.++||||+++++++...
T Consensus         8 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   78 (304)
T 2jam_A            8 RKTFIFMEVL--------GSGAFSEVFLVKQRLTGKLFALKCIKKS-PAFRDSSLENEIAVLKKIKHENIVTLEDIYEST   78 (304)
T ss_dssp             HHHEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             hccceeeeec--------cCCCCceEEEEEECCCCCEEEEEEEecc-cccchHHHHHHHHHHHhCCCCCeeehhhhcccC
Confidence            4577777888        99999999975321     011111110 011222466899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +..+++|||+++|+|.+++...+.+++..+..++
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  112 (304)
T 2jam_A           79 THYYLVMQLVSGGELFDRILERGVYTEKDASLVI  112 (304)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHH
T ss_pred             CEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHH
Confidence            9999999999999999999887888988776554

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.31  E-value=4.2e-13  Score=89.35  Aligned_cols=101  Identities=10%  Similarity=0.046  Sum_probs=76.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      .+.|++.+.|        |.|+||.||++...     .+++........ .....+.+|+.+++.++|+||+++++++..
T Consensus         5 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   76 (284)
T 3kk8_A            5 SDNYDVKEEL--------GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE   76 (284)
T ss_dssp             TTTEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhhhh--------cCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc
Confidence            4577888888        99999999985321     011111111111 122346689999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+..+++|||+.+|+|.+++.....+++..+..++
T Consensus        77 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~  111 (284)
T 3kk8_A           77 ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI  111 (284)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence            99999999999999999999887888888776554

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.31  E-value=1.7e-13  Score=95.79  Aligned_cols=99  Identities=14%  Similarity=0.246  Sum_probs=72.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      +.|++++.|        |.|+||.||++....     +++..... .......+.+|+.+++.++|+||+++++++....
T Consensus        51 ~~y~i~~~L--------G~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~  121 (387)
T 1kob_A           51 DYYDILEEL--------GSGAFGVVHRCVEKATGRVFVAKFINTP-YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY  121 (387)
T ss_dssp             GTEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEECC-SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS
T ss_pred             cceEEEEEE--------ecCCCEEEEEEEECCCCCEEEEEEeccc-chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC
Confidence            356666666        999999999853210     11111110 1122335678999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .++++||||.+|+|.+++... ..+++..+..++
T Consensus       122 ~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~  155 (387)
T 1kob_A          122 EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM  155 (387)
T ss_dssp             EEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHH
T ss_pred             EEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHH
Confidence            999999999999999999765 368887776654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.30  E-value=1.7e-13  Score=91.27  Aligned_cols=101  Identities=18%  Similarity=0.159  Sum_probs=73.1

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ...+.|++++.|        |.|+||.||++.+.    .+++......  .....+.+|+.++..++|+||+++++++..
T Consensus        21 ~~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   90 (283)
T 3gen_A           21 IDPKDLTFLKEL--------GTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQLYGVCTK   90 (283)
T ss_dssp             CCGGGEEEEEEC--------C---CEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             CCHHHHHhHhhc--------CCCCCceEEEEEEcCCCeEEEEEecCCC--CCHHHHHHHHHHHhcCCCCCEeeEEEEEec
Confidence            445678888888        99999999975321    1111111111  112356789999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHH-cCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKK-AGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~-~~~l~~~~~~~~~  123 (125)
                      .+..+++|||+.+|+|.+++.. ...+++..+..++
T Consensus        91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~  126 (283)
T 3gen_A           91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC  126 (283)
T ss_dssp             SSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHH
T ss_pred             CCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHH
Confidence            9999999999999999999987 3568887776554

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.30  E-value=1.3e-12  Score=88.65  Aligned_cols=100  Identities=14%  Similarity=0.321  Sum_probs=59.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|++++.|        |.|+||.||++...     .+++.............+.+|+.+++.++||||+++++++..+
T Consensus         4 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   75 (317)
T 2pmi_A            4 SSQFKQLEKL--------GNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTE   75 (317)
T ss_dssp             -----------------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCT
T ss_pred             ccceeEeeEE--------CCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEEC
Confidence            3578888999        99999999985331     1111111110111112466899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc------CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA------GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~------~~l~~~~~~~~~  123 (125)
                      +.++++|||+.+ +|.+++...      ..+++..++.++
T Consensus        76 ~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~~~~~~~  114 (317)
T 2pmi_A           76 NKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQ  114 (317)
T ss_dssp             TEEEEEEECCCC-BHHHHHHHHHSSSCCCCCCHHHHHHHH
T ss_pred             CeEEEEEEecCC-CHHHHHHhccccccccCCCHHHHHHHH
Confidence            999999999995 999999864      247777665543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.30  E-value=8.2e-14  Score=94.47  Aligned_cols=101  Identities=19%  Similarity=0.206  Sum_probs=72.6

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ...|++.+.|        |.|+||.||++....     +++.............+.+|+.+++.++||||+++++++...
T Consensus         8 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   79 (319)
T 4euu_A            8 NHLWLLSDIL--------GQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEET   79 (319)
T ss_dssp             SEEEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT
T ss_pred             CCCEEEEEEe--------cCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecC
Confidence            3467788888        999999999854321     111111111111122456899999999999999999999876


Q ss_pred             C--eEEEEEEecCCCCHHHHHHHcC---CCCHHHHhhhh
Q psy14717         90 Q--DISICMEYMDGGSLDLILKKAG---KIPEHILGTIT  123 (125)
Q Consensus        90 ~--~~~iv~e~~~~GsL~~~l~~~~---~l~~~~~~~~~  123 (125)
                      .  ..+++|||+++|+|.++++...   .+++..+..++
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~  118 (319)
T 4euu_A           80 TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL  118 (319)
T ss_dssp             TTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHH
T ss_pred             CCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHH
Confidence            5  7899999999999999998753   28887776554

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.29  E-value=7.2e-13  Score=88.38  Aligned_cols=102  Identities=15%  Similarity=0.157  Sum_probs=76.1

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH-------HhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL-------KTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~-------~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      ..+.|++.+.|        |.|+||.||++...........+....       ....+.+|+.+++.++|+||+++++++
T Consensus        12 ~~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   83 (284)
T 2vgo_A           12 TIDDFDIGRPL--------GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYF   83 (284)
T ss_dssp             CGGGEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhhhceeehee--------cCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEE
Confidence            45678888888        999999999853210000000011100       112466899999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ...+..+++|||+++|+|.+++...+.+++..+..++
T Consensus        84 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  120 (284)
T 2vgo_A           84 HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM  120 (284)
T ss_dssp             ECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHH
T ss_pred             EcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999999999988889988776554

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.29  E-value=1.5e-13  Score=90.97  Aligned_cols=101  Identities=17%  Similarity=0.147  Sum_probs=75.7

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ...+.|++++.|        |.|+||.||++...    .+++.....  ......+.+|+.++..++||||+++++++..
T Consensus         5 l~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   74 (268)
T 3sxs_A            5 LKREEITLLKEL--------GSGQFGVVKLGKWKGQYDVAVKMIKEG--SMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK   74 (268)
T ss_dssp             CCGGGEEEEEEE--------EEETTEEEEEEEETTTEEEEEEEECBT--TBCHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             echhheeeeeee--------ccCCCceEEEEEecCceeEEEEEeccC--CCcHHHHHHHHHHHHhCCCCCEeeEEEEEcc
Confidence            345678888888        99999999975321    111111111  1112356789999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .+..+++|||+++|+|.++++.. ..+++..+..++
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~  110 (268)
T 3sxs_A           75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMC  110 (268)
T ss_dssp             SSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHH
T ss_pred             CCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHH
Confidence            99999999999999999999875 358887776654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.29  E-value=1.8e-13  Score=92.81  Aligned_cols=91  Identities=16%  Similarity=0.214  Sum_probs=64.8

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|++++.|        |.|+||.||++...     .+++.............+.+|+.+++.++||||+++++++...
T Consensus         5 ~~~y~~~~~l--------G~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~   76 (332)
T 3qd2_B            5 LTDFEPIQCM--------GRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLET   76 (332)
T ss_dssp             HHHEEEEEEE--------ECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEEC
T ss_pred             hhcCceeeEe--------cCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEe
Confidence            3467777778        99999999985432     1222111111112223567899999999999999999998654


Q ss_pred             C---------------------------------------------------------eEEEEEEecCCCCHHHHHHHcC
Q psy14717         90 Q---------------------------------------------------------DISICMEYMDGGSLDLILKKAG  112 (125)
Q Consensus        90 ~---------------------------------------------------------~~~iv~e~~~~GsL~~~l~~~~  112 (125)
                      .                                                         .++++||||.+|+|.++++...
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~  156 (332)
T 3qd2_B           77 PPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC  156 (332)
T ss_dssp             CSCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC
T ss_pred             ccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc
Confidence            3                                                         3899999999999999998864


Q ss_pred             C
Q psy14717        113 K  113 (125)
Q Consensus       113 ~  113 (125)
                      .
T Consensus       157 ~  157 (332)
T 3qd2_B          157 S  157 (332)
T ss_dssp             S
T ss_pred             C
Confidence            3

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.29  E-value=1.4e-12  Score=87.55  Aligned_cols=101  Identities=20%  Similarity=0.210  Sum_probs=71.6

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHH----H-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFV----D-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~----~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      ...|+.++.|        |.|+||.||++.+    .     .+++.............+.+|+.+++.++|+||++++++
T Consensus        20 ~~~~~~~~~l--------g~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   91 (302)
T 4e5w_A           20 KRFLKRIRDL--------GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGI   91 (302)
T ss_dssp             GGGEEEEEEE--------EECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             hhhhhhhhcc--------CCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeE
Confidence            4567888888        9999999998531    0     111111111111111346789999999999999999999


Q ss_pred             EEeC--CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         86 FISD--QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~--~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +...  +.++++|||+++|+|.+++... ..+++..+..++
T Consensus        92 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  132 (302)
T 4e5w_A           92 CTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA  132 (302)
T ss_dssp             EEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHH
T ss_pred             EecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHH
Confidence            9876  6699999999999999999654 568887766554

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.28  E-value=2.3e-13  Score=92.21  Aligned_cols=89  Identities=18%  Similarity=0.228  Sum_probs=67.6

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .+.|++.+.|        |.|+||.||++.+.          .+++.............+.+|+.+++.++|+||+++++
T Consensus        24 ~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~   95 (322)
T 1p4o_A           24 REKITMSREL--------GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLG   95 (322)
T ss_dssp             GGGEEEEEEE--------EECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEE
T ss_pred             hhheeeeeEe--------ccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEE
Confidence            4577787888        99999999985321          12222221111122335678999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++...+..+++|||+++|+|.+++...
T Consensus        96 ~~~~~~~~~lv~e~~~~~~L~~~l~~~  122 (322)
T 1p4o_A           96 VVSQGQPTLVIMELMTRGDLKSYLRSL  122 (322)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHH
T ss_pred             EEccCCccEEEEEeCCCCcHHHHHHHh
Confidence            999999999999999999999999863

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.28  E-value=3e-13  Score=90.10  Aligned_cols=107  Identities=15%  Similarity=0.148  Sum_probs=77.2

Q ss_pred             CCCCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCce
Q psy14717          8 GSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHI   79 (125)
Q Consensus         8 ~~~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i   79 (125)
                      |.......+.|++.+.|        |+|+||.||++...        .+++.............+.+|+.+++.++||||
T Consensus         4 ~~~~~~~~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i   75 (281)
T 3cc6_A            4 GPQYGIAREDVVLNRIL--------GEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHI   75 (281)
T ss_dssp             CCCCSCCGGGEEEEEEE--------EECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTB
T ss_pred             CccceecccceEEEEEE--------EecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCc
Confidence            44455666788988899        99999999985421        122222211111223357789999999999999


Q ss_pred             eeeeeeEEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         80 VGFYGAFISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        80 v~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +++++++..+ ..+++|||+++|+|.+++... ..+++..+..++
T Consensus        76 ~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  119 (281)
T 3cc6_A           76 VKLIGIIEEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYS  119 (281)
T ss_dssp             CCEEEEECSS-SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHH
T ss_pred             ceEEEEEcCC-CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHH
Confidence            9999987654 568999999999999999875 458877766543

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.28  E-value=1.1e-12  Score=88.51  Aligned_cols=100  Identities=24%  Similarity=0.406  Sum_probs=70.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCC-cc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPS-ER-ADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~-~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ..|++.+.|        |+|+||.||++...     .+++.... .. .......+.+|+.+++.++|+||+++++++..
T Consensus        32 ~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~  103 (310)
T 2wqm_A           32 ANFRIEKKI--------GRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE  103 (310)
T ss_dssp             GGEEEEEEE--------ECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             cceEEEEee--------cCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc
Confidence            456666777        99999999985321     11121111 11 11222356789999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHH----cCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKK----AGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~----~~~l~~~~~~~~~  123 (125)
                      .+..+++|||+.+|+|.+++..    ...+++..+..++
T Consensus       104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~  142 (310)
T 2wqm_A          104 DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF  142 (310)
T ss_dssp             TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred             CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHH
Confidence            9999999999999999999975    2457877765544

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.28  E-value=1e-13  Score=94.18  Aligned_cols=92  Identities=16%  Similarity=0.217  Sum_probs=66.2

Q ss_pred             CCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHH
Q psy14717         32 LPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI  107 (125)
Q Consensus        32 lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~  107 (125)
                      ||.|+||.||++...    .+++.............+.+|+.+++.+.|+||+++++++..+...+++|||+.+|+|.++
T Consensus        38 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  117 (326)
T 3uim_A           38 LGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASC  117 (326)
T ss_dssp             EECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHH
T ss_pred             EecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHH
Confidence            399999999985321    1112111111111122467899999999999999999999999999999999999999999


Q ss_pred             HHHcC----CCCHHHHhhhh
Q psy14717        108 LKKAG----KIPEHILGTIT  123 (125)
Q Consensus       108 l~~~~----~l~~~~~~~~~  123 (125)
                      ++...    .+++..+..++
T Consensus       118 l~~~~~~~~~~~~~~~~~i~  137 (326)
T 3uim_A          118 LRERPESQPPLDWPKRQRIA  137 (326)
T ss_dssp             HHCCSTTCCCCCHHHHHHHH
T ss_pred             HHhccccCCCCCHHHHHHHH
Confidence            98753    37776665544

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.28  E-value=7.5e-13  Score=88.86  Aligned_cols=102  Identities=19%  Similarity=0.379  Sum_probs=74.3

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .+.+.|++++.|        |.|+||.||++....     +++..... .......+.+|+.++..++||||+++++++.
T Consensus        16 ~~~~~y~i~~~l--------g~G~~g~V~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   86 (302)
T 2j7t_A           16 DPNEVWEIVGEL--------GDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYIVEIEILATCDHPYIVKLLGAYY   86 (302)
T ss_dssp             CGGGTEEEEEEE--------ECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             CCccceeeccee--------ccCCCeEEEEEEEcCCCcEEEEEEecCC-CHHHHHHHHHHHHHHhcCCCCCEeeeeeeee
Confidence            345678888888        999999999854321     11111110 0111225668999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ..+..+++|||+++|+|.+++... ..+++..+..++
T Consensus        87 ~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~  123 (302)
T 2j7t_A           87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVC  123 (302)
T ss_dssp             CC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHH
T ss_pred             eCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHH
Confidence            999999999999999999998863 568887776554

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.28  E-value=4.4e-13  Score=89.05  Aligned_cols=104  Identities=20%  Similarity=0.318  Sum_probs=74.6

Q ss_pred             CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         12 PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      |...+.|++++.|        |.|+||.||++...     .+++...... .......+.+|+.+++.++||||++++++
T Consensus         2 p~~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~   73 (279)
T 2w5a_A            2 PSRAEDYEVLYTI--------GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR   73 (279)
T ss_dssp             -CCGGGEEEEEEE--------EECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CCchhheeeehhc--------cCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEE
Confidence            4456788888888        99999999985331     0111111111 11223356789999999999999999998


Q ss_pred             EEe--CCeEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhhh
Q psy14717         86 FIS--DQDISICMEYMDGGSLDLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~--~~~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~~  123 (125)
                      +..  ...++++|||+++|+|.+++...    ..+++..+..++
T Consensus        74 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~  117 (279)
T 2w5a_A           74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM  117 (279)
T ss_dssp             EEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred             EecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHH
Confidence            865  56799999999999999999864    238887766554

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.28  E-value=5.2e-13  Score=89.28  Aligned_cols=91  Identities=18%  Similarity=0.266  Sum_probs=66.9

Q ss_pred             CCCCchhHHHHHHHH-----HhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe----CCeEEEEEEecCCC
Q psy14717         33 PAGIFTDSFRDFVDR-----CLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFIS----DQDISICMEYMDGG  102 (125)
Q Consensus        33 g~g~fg~v~~~~~~~-----~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~----~~~~~iv~e~~~~G  102 (125)
                      |+|+||.||++....     +++...... .......+.+|+.+++.++||||+++++++..    ...++++|||+++|
T Consensus        35 g~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~  114 (290)
T 1t4h_A           35 GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSG  114 (290)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSC
T ss_pred             cCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCC
Confidence            999999999854321     111111111 11222356789999999999999999999876    35599999999999


Q ss_pred             CHHHHHHHcCCCCHHHHhhhh
Q psy14717        103 SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|.++++..+.+++..+..++
T Consensus       115 ~L~~~l~~~~~~~~~~~~~~~  135 (290)
T 1t4h_A          115 TLKTYLKRFKVMKIKVLRSWC  135 (290)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHH
T ss_pred             CHHHHHHHccCCCHHHHHHHH
Confidence            999999987889988776554

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.28  E-value=1.7e-13  Score=92.19  Aligned_cols=101  Identities=28%  Similarity=0.490  Sum_probs=74.6

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      +.+.|+.++.|        |.|+||.||++...     .+++.............+.+|+.+++.+.|+||+++++++..
T Consensus        20 ~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   91 (303)
T 3a7i_A           20 PEELFTKLEKI--------GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK   91 (303)
T ss_dssp             GGGTEEEEEEE--------EECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             hHHHHHHhhhh--------cccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence            34567777788        99999999985321     111111111111122356789999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ....+++|||+++|+|.+++.. +.+++..+..++
T Consensus        92 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~  125 (303)
T 3a7i_A           92 DTKLWIIMEYLGGGSALDLLEP-GPLDETQIATIL  125 (303)
T ss_dssp             TTEEEEEEECCTTEEHHHHHTT-SCCCHHHHHHHH
T ss_pred             CCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHH
Confidence            9999999999999999999976 578887766554

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.28  E-value=3.9e-13  Score=90.05  Aligned_cols=98  Identities=20%  Similarity=0.305  Sum_probs=70.0

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      .|++++.|        |.|+||.||++...     .+++...... .......+.+|+.+++.++|+||+++++++..++
T Consensus         3 ~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   74 (292)
T 3o0g_A            3 KYEKLEKI--------GEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK   74 (292)
T ss_dssp             SEEEEEEE--------EECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred             CceeeeEe--------cCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC
Confidence            46666777        99999999985432     1111111111 1111234668999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHH-cCCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKK-AGKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~-~~~l~~~~~~~~~  123 (125)
                      .++++|||+.+ +|.+.+.. .+.+++..++.++
T Consensus        75 ~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~  107 (292)
T 3o0g_A           75 KLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFL  107 (292)
T ss_dssp             EEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHH
T ss_pred             EEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHH
Confidence            99999999998 55555554 5678888877654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.27  E-value=1.8e-13  Score=93.21  Aligned_cols=88  Identities=18%  Similarity=0.175  Sum_probs=65.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYG   84 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~   84 (125)
                      +.|++.+.|        |.|+||.||++...          .+++.............+.+|+.+++.+ +||||+++++
T Consensus        46 ~~~~~~~~l--------G~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~  117 (333)
T 2i1m_A           46 NNLQFGKTL--------GAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLG  117 (333)
T ss_dssp             TSEEEEEEE--------EECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             HHceeeeEe--------ccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence            456666677        99999999985421          0111111111112233567899999999 8999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++...+.++++|||+++|+|.+++...
T Consensus       118 ~~~~~~~~~lv~e~~~~g~L~~~l~~~  144 (333)
T 2i1m_A          118 ACTHGGPVLVITEYCCYGDLLNFLRRK  144 (333)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHH
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHHh
Confidence            999999999999999999999999864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.27  E-value=9.3e-13  Score=87.85  Aligned_cols=101  Identities=13%  Similarity=0.198  Sum_probs=75.9

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      ...+.|++.+.|        |.|+||.||++.+..     +++....  .......+.+|+.+++.++|+||+++++++.
T Consensus        10 ~~~~~~~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   79 (288)
T 3kfa_A           10 MERTDITMKHKL--------GGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT   79 (288)
T ss_dssp             CCGGGEEEEEES--------GGGTTCSEEEEEEGGGTEEEEEEEECS--CSTHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccccceeEEeec--------CCCCceeEEEeEecCCCEEEEEEecCc--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEc
Confidence            345677888888        999999999864321     1111111  1122335678999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      .....+++|||+.+|+|.++++..  ..+++..+..++
T Consensus        80 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~  117 (288)
T 3kfa_A           80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA  117 (288)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHH
T ss_pred             cCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHH
Confidence            999999999999999999999875  347877765543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.27  E-value=8.8e-13  Score=89.02  Aligned_cols=95  Identities=20%  Similarity=0.512  Sum_probs=66.8

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH-------HhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL-------KTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~-------~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      +.|++++.|        |.|+||.||++...     ........       ....+.+|+.++..++|+||+++++++..
T Consensus        29 ~~y~~~~~l--------g~G~~g~Vy~~~~~-----~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   95 (314)
T 3com_A           29 EVFDVLEKL--------GEGSYGSVYKAIHK-----ETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFK   95 (314)
T ss_dssp             -CEEEEEEC--------C----CEEEEEEET-----TTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             hhhhhheee--------ccCCCeEEEEEEEC-----CCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe
Confidence            345555555        99999999985321     11111111       12246789999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHH-cCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKK-AGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~-~~~l~~~~~~~~~  123 (125)
                      .+.++++|||+.+|+|.+++.. ...+++..+..++
T Consensus        96 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~  131 (314)
T 3com_A           96 NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATIL  131 (314)
T ss_dssp             TTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHH
T ss_pred             CCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHH
Confidence            9999999999999999999974 4678887766554

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.27  E-value=1.7e-12  Score=90.16  Aligned_cols=91  Identities=22%  Similarity=0.246  Sum_probs=62.4

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      ||.|+||.||++...     .+++..... .......+.+|+.++..++||||+++++++...+.++++|||+++|+|.+
T Consensus        97 lG~G~~g~Vy~a~~~~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~  175 (373)
T 2x4f_A           97 LGGGRFGQVHKCEETATGLKLAAKIIKTR-GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFD  175 (373)
T ss_dssp             CC-----CEEEEEETTTCCEEEEEEEECC-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHH
T ss_pred             EecCcCEEEEEEEEcCCCcEEEEEEEccc-ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHH
Confidence            599999999985321     111111111 11223357789999999999999999999999999999999999999999


Q ss_pred             HHHHc-CCCCHHHHhhhh
Q psy14717        107 ILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       107 ~l~~~-~~l~~~~~~~~~  123 (125)
                      ++... ..+++..+..++
T Consensus       176 ~l~~~~~~l~~~~~~~i~  193 (373)
T 2x4f_A          176 RIIDESYNLTELDTILFM  193 (373)
T ss_dssp             HHHHTGGGCCHHHHHHHH
T ss_pred             HHHhcCCCCCHHHHHHHH
Confidence            88764 458877665543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.27  E-value=7.5e-13  Score=98.21  Aligned_cols=87  Identities=18%  Similarity=0.210  Sum_probs=67.3

Q ss_pred             CCCCCchhHHHHHHHHHhhcCCCccccH------------HhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEe
Q psy14717         32 LPAGIFTDSFRDFVDRCLKKNPSERADL------------KTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEY   98 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~   98 (125)
                      ||.|+||.||++..     +...+..+.            ......+|..++..+ +|++|+.+++++.+.+.+||||||
T Consensus       349 LG~G~fG~V~~~~~-----~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~  423 (674)
T 3pfq_A          349 LGKGSFGKVMLSER-----KGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEY  423 (674)
T ss_dssp             SSBTTTBCEEEEEE-----SSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEEC
T ss_pred             EccCCCEEEEEEEE-----CCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeC
Confidence            39999999998432     222111111            111355788888876 799999999999999999999999


Q ss_pred             cCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         99 MDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        99 ~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++|+|..++.+.+.+++..+++++
T Consensus       424 ~~gg~L~~~l~~~~~~~~~~~~~~~  448 (674)
T 3pfq_A          424 VNGGDLMYHIQQVGRFKEPHAVFYA  448 (674)
T ss_dssp             CCSCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999988889998887765

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.27  E-value=1.1e-12  Score=95.23  Aligned_cols=87  Identities=22%  Similarity=0.208  Sum_probs=66.6

Q ss_pred             CCCCCchhHHHHHHHHHhhcCCCccccH------------HhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEec
Q psy14717         32 LPAGIFTDSFRDFVDRCLKKNPSERADL------------KTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYM   99 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~   99 (125)
                      ||.|+||.||++..     +...+..+.            ....+.+|+.++..++||||+++++++.+...+|++|||+
T Consensus       193 LG~G~fG~Vy~a~~-----~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~  267 (543)
T 3c4z_A          193 LGRGGFGEVFACQM-----KATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIM  267 (543)
T ss_dssp             EEECSSSEEEEEEE-----TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             EeeCCCeEEEEEEE-----CCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEec
Confidence            39999999998432     111111111            0124567999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHHc----CCCCHHHHhhhh
Q psy14717        100 DGGSLDLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus       100 ~~GsL~~~l~~~----~~l~~~~~~~~~  123 (125)
                      ++|+|..++...    ..+++..++.++
T Consensus       268 ~gg~L~~~l~~~~~~~~~l~e~~~~~~~  295 (543)
T 3c4z_A          268 NGGDIRYHIYNVDEDNPGFQEPRAIFYT  295 (543)
T ss_dssp             TTCBHHHHHHTSSTTSCSCCHHHHHHHH
T ss_pred             cCCCHHHHHHHhhcccccccHHHHHHHH
Confidence            999999999874    358888776654

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.27  E-value=5.4e-14  Score=93.27  Aligned_cols=101  Identities=17%  Similarity=0.153  Sum_probs=74.6

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|++++.|        |.|+||.||++...     .+++.............+.+|+.+++.++|+||+++++++...
T Consensus         6 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   77 (276)
T 2yex_A            6 VEDWDLVQTL--------GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG   77 (276)
T ss_dssp             HHHEEEEEEE--------EECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred             ecceEEEEEe--------ecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcC
Confidence            3567777778        99999999985321     0111111111111223567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +..+++|||+++|+|.+++.....+++..+..++
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  111 (276)
T 2yex_A           78 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF  111 (276)
T ss_dssp             TEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHH
T ss_pred             CEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHH
Confidence            9999999999999999999876678887766554

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.26  E-value=3.1e-13  Score=90.62  Aligned_cols=103  Identities=21%  Similarity=0.216  Sum_probs=74.4

Q ss_pred             CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeee
Q psy14717         12 PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      ......|++++.|        |.|+||.||++...         .+++..... .......+.+|+.+++.++||||+++
T Consensus         6 ~~~~~~~~~~~~l--------g~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~   76 (295)
T 3ugc_A            6 QFEERHLKFLQQL--------GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKY   76 (295)
T ss_dssp             CCCGGGEEEEEEE--------EECSSEEEEEEEECTTCSSCCEEEEEEEESCC-CHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             cCCHHHhhhhhee--------eccCCEEEEEEEEecccCCCCcEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeeE
Confidence            3455688899999        99999999985310         111111111 11122356789999999999999999


Q ss_pred             eeeEEeC--CeEEEEEEecCCCCHHHHHHHcC-CCCHHHHhhhh
Q psy14717         83 YGAFISD--QDISICMEYMDGGSLDLILKKAG-KIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~--~~~~iv~e~~~~GsL~~~l~~~~-~l~~~~~~~~~  123 (125)
                      ++++...  ..++++|||+++|+|.+++.... .+++..+..++
T Consensus        77 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  120 (295)
T 3ugc_A           77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT  120 (295)
T ss_dssp             EEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHH
T ss_pred             EEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHH
Confidence            9998653  55899999999999999998853 48877765543

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.26  E-value=1.4e-13  Score=93.57  Aligned_cols=98  Identities=20%  Similarity=0.218  Sum_probs=71.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC-
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ-   90 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~-   90 (125)
                      ...|++++.|        |+|+||.||++...   .+++....  .........+|+.+++.++||||+++++++.... 
T Consensus        23 ~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   92 (322)
T 3soc_A           23 SMPLQLLEVK--------ARGRFGCVWKAQLLNEYVAVKIFPI--QDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTS   92 (322)
T ss_dssp             TEEEEEEEEE--------ECSTTCEEEEEEETTEEEEEEEECG--GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS
T ss_pred             hhhchhhhee--------cccCceEEEEEEECCCEEEEEEeec--CchHHHHHHHHHHHHhcCCCCCchhhcceeccCCC
Confidence            3578888888        99999999986332   11111111  1112223456888888999999999999998754 


Q ss_pred             ---eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         91 ---DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        91 ---~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                         .++++||||++|+|.++++. ..+++..+..++
T Consensus        93 ~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~  127 (322)
T 3soc_A           93 VDVDLWLITAFHEKGSLSDFLKA-NVVSWNELCHIA  127 (322)
T ss_dssp             SSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHH
T ss_pred             CCceEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHH
Confidence               37999999999999999988 468887766554

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.26  E-value=1.3e-12  Score=87.74  Aligned_cols=87  Identities=11%  Similarity=0.062  Sum_probs=66.7

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc--cHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA--DLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      +.|++.+.|        |+|+||.||++...     .+++.......  ......+.+|+..+..+.|+||+++++++..
T Consensus        31 ~~y~i~~~l--------g~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~  102 (286)
T 3uqc_A           31 GRYRLLIFH--------GGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT  102 (286)
T ss_dssp             TTEEEEEEE--------EBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred             CcEEEEEEE--------cccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE
Confidence            468888888        99999999986432     12222222111  1112356789999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHH
Q psy14717         89 DQDISICMEYMDGGSLDLILKK  110 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~  110 (125)
                      .+..|++|||+.+|+|.+++++
T Consensus       103 ~~~~~lv~e~~~g~~L~~~l~~  124 (286)
T 3uqc_A          103 RAGGLVVAEWIRGGSLQEVADT  124 (286)
T ss_dssp             TTEEEEEEECCCEEEHHHHHTT
T ss_pred             CCcEEEEEEecCCCCHHHHHhc
Confidence            9999999999999999999965

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.26  E-value=6.4e-13  Score=90.42  Aligned_cols=91  Identities=14%  Similarity=0.250  Sum_probs=67.8

Q ss_pred             CCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         31 KLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      .||+|+||.||++...     .+++..... .......+.+|+.+++.++|+||+++++++...+..+++|||+++|+|.
T Consensus        52 ~lg~G~~g~V~~a~~~~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~  130 (321)
T 2c30_A           52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLR-KQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT  130 (321)
T ss_dssp             EEEEETTEEEEEEEETTTCCEEEEEEEETT-TCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHH
T ss_pred             EeccCCCeEEEEEEECCCCcEEEEEEEecc-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHH
Confidence            4699999999985321     111111111 0111224668999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCHHHHhhhh
Q psy14717        106 LILKKAGKIPEHILGTIT  123 (125)
Q Consensus       106 ~~l~~~~~l~~~~~~~~~  123 (125)
                      +++.+ ..+++..+..++
T Consensus       131 ~~l~~-~~l~~~~~~~i~  147 (321)
T 2c30_A          131 DIVSQ-VRLNEEQIATVC  147 (321)
T ss_dssp             HHHTT-CCCCHHHHHHHH
T ss_pred             HHHHh-cCCCHHHHHHHH
Confidence            99876 468887776554

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.26  E-value=7.1e-13  Score=89.93  Aligned_cols=98  Identities=17%  Similarity=0.184  Sum_probs=71.4

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHH----HH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDF----VD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~----~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .|++++.|        |.|+||.||.+.    ..     .+++.............+.+|+.+++.++||||+++++++.
T Consensus        32 ~~~~~~~l--------G~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~  103 (318)
T 3lxp_A           32 YLKKIRDL--------GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCE  103 (318)
T ss_dssp             GEEEEEEE--------EECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             HHhhhhee--------cCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEe
Confidence            34888889        999999996531    11     11222111111122335678999999999999999999998


Q ss_pred             eC--CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         88 SD--QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        88 ~~--~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..  ..++++|||+++|+|.+++... .+++..+..++
T Consensus       104 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~  140 (318)
T 3lxp_A          104 DAGAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFA  140 (318)
T ss_dssp             ETTTTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHH
T ss_pred             cCCCceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHH
Confidence            84  6799999999999999999874 58887776554

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.25  E-value=1e-12  Score=90.02  Aligned_cols=99  Identities=17%  Similarity=0.207  Sum_probs=72.8

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-------cHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-------DLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-------~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .|++++.|        |.|+||.||++...     .+++.......       ......+.+|+.+++.++||||+++++
T Consensus        25 ~y~~~~~l--------G~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~   96 (335)
T 3dls_A           25 KYSTMSPL--------GSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLD   96 (335)
T ss_dssp             HEEEEEEC--------SSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEE
T ss_pred             ceEEEeEE--------EecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            45555666        99999999986321     11111111100       001124567999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCC-CHHHHHHHcCCCCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGG-SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~G-sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++...+.++++|||+.+| +|.++++....+++..+..++
T Consensus        97 ~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~  136 (335)
T 3dls_A           97 IFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIF  136 (335)
T ss_dssp             EEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHH
T ss_pred             EEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHH
Confidence            999999999999999887 999999988789988877654

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.25  E-value=1.2e-13  Score=91.47  Aligned_cols=100  Identities=21%  Similarity=0.353  Sum_probs=70.7

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---HHhhcCCCcc---ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---RCLKKNPSER---ADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---~~~~~~~~~~---~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      .+.|++.+.|        |.|+||.||++.+.   .+++......   .......+.+|+.+++.++||||+++++++..
T Consensus         6 ~~~~~~~~~l--------g~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~   77 (271)
T 3dtc_A            6 FAELTLEEII--------GIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK   77 (271)
T ss_dssp             TTSEEEEEEE--------EEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred             hhheeeeeee--------ccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence            3456777777        99999999986432   1111111110   01112246689999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++..+++|||+++|+|.++++. +.+++..+..++
T Consensus        78 ~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~  111 (271)
T 3dtc_A           78 EPNLCLVMEFARGGPLNRVLSG-KRIPPDILVNWA  111 (271)
T ss_dssp             C--CEEEEECCTTEEHHHHHTS-SCCCHHHHHHHH
T ss_pred             CCceEEEEEcCCCCCHHHHhhc-CCCCHHHHHHHH
Confidence            9999999999999999999975 578887776554

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.25  E-value=5.1e-13  Score=89.43  Aligned_cols=102  Identities=15%  Similarity=0.174  Sum_probs=73.5

Q ss_pred             CCchHHHHHH-HhhcCCCCCCCCCCchhHHHHHHH-------HHhhcCCCc-cccHHhhhHHHHHHHHHhcCCCceeeee
Q psy14717         13 RPMAIFELLD-YIVNEPPPKLPAGIFTDSFRDFVD-------RCLKKNPSE-RADLKTLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        13 ~~~~~~~~~~-~i~~~~~~~lg~g~fg~v~~~~~~-------~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      .....|++.+ .|        |.|+||.||++...       .+++..... ........+.+|+.+++.++||||++++
T Consensus        13 ~~~~~y~~~~~~l--------g~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~   84 (291)
T 1xbb_A           13 LDRKLLTLEDKEL--------GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI   84 (291)
T ss_dssp             CCGGGEEEEEEEE--------EECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             ecchhhhhccCcc--------ccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence            3445666666 67        99999999985221       111111111 1111233577899999999999999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++ ..+..+++|||+++|+|.+++...+.+++..+..++
T Consensus        85 ~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~  123 (291)
T 1xbb_A           85 GIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV  123 (291)
T ss_dssp             EEE-ESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHH
T ss_pred             EEE-CCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHH
Confidence            998 566789999999999999999988779888776654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.25  E-value=1.1e-12  Score=87.17  Aligned_cols=101  Identities=15%  Similarity=0.198  Sum_probs=73.8

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHH-------hhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLK-------TLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .+.|++.+.|        |.|+||.||++.....-+....+.....       ...+.+|+.+++.++||||+++++++.
T Consensus        10 ~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~   81 (278)
T 3cok_A           10 IEDFKVGNLL--------GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE   81 (278)
T ss_dssp             GGGEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEE
T ss_pred             cccceeeeee--------cCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEc
Confidence            4567777778        9999999998532100000001111110       124668999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ..+..+++|||+++|+|.+++... ..+++..+..++
T Consensus        82 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  118 (278)
T 3cok_A           82 DSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFM  118 (278)
T ss_dssp             CSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHH
T ss_pred             cCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHH
Confidence            999999999999999999999875 568887776654

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.25  E-value=8.4e-13  Score=96.99  Aligned_cols=92  Identities=18%  Similarity=0.248  Sum_probs=67.3

Q ss_pred             CCCCCCchhHHHHHHH-------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         31 KLPAGIFTDSFRDFVD-------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~-------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      .||.|+||.||++.+.       .+++.............+.+|+.+++.++|+||+++++++.. +.+++|||||.+|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            3699999999986331       122222211111223357789999999999999999999876 56999999999999


Q ss_pred             HHHHHHHc-CCCCHHHHhhhh
Q psy14717        104 LDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~-~~l~~~~~~~~~  123 (125)
                      |.+++... ..+++..+..++
T Consensus       422 L~~~l~~~~~~l~~~~~~~i~  442 (613)
T 2ozo_A          422 LHKFLVGKREEIPVSNVAELL  442 (613)
T ss_dssp             HHHHHTTCTTTSCHHHHHHHH
T ss_pred             HHHHHhhccCCCCHHHHHHHH
Confidence            99999764 458887776654

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.24  E-value=1.2e-13  Score=93.48  Aligned_cols=101  Identities=20%  Similarity=0.130  Sum_probs=74.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-c-HHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-D-LKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .+.|++.+.|        |.|+||.||++.+.     .+++....... . .....+.+|+.++..++||||+++++++.
T Consensus        11 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   82 (311)
T 3ork_A           11 SDRYELGEIL--------GFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE   82 (311)
T ss_dssp             TTTEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEE
T ss_pred             cCcEEEEEEE--------ccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeee
Confidence            4578888888        99999999975431     12222111111 1 11224668999999999999999999987


Q ss_pred             eCC----eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         88 SDQ----DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~----~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ...    ..|++|||+++|+|.++++..+.+++..+..++
T Consensus        83 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~  122 (311)
T 3ork_A           83 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVI  122 (311)
T ss_dssp             EEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHH
T ss_pred             ccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence            654    359999999999999999988889988776654

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.24  E-value=1.3e-12  Score=87.32  Aligned_cols=100  Identities=16%  Similarity=0.197  Sum_probs=73.8

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.|++++.|        |.|+||.||++...     .+++....... ......+.+|+.+++.++||||+++++++...
T Consensus        22 ~~y~i~~~l--------g~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   93 (287)
T 2wei_A           22 ERYNIVCML--------GKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS   93 (287)
T ss_dssp             HHEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             hcceeeEEE--------cCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCC
Confidence            356666677        99999999985321     01111111000 11122567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ...+++|||+++|+|.+++.....+++..+..++
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~  127 (287)
T 2wei_A           94 SSFYIVGELYTGGELFDEIIKRKRFSEHDAARII  127 (287)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             CeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999999999999887789988776654

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.24  E-value=4.3e-13  Score=89.17  Aligned_cols=100  Identities=21%  Similarity=0.261  Sum_probs=70.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe-------
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS-------   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~-------   88 (125)
                      ..|++++.|        |.|+||.||++.....-+....+........+.+|+.+++.++||||+++++++..       
T Consensus        11 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (284)
T 2a19_B           11 MDFKEIELI--------GSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET   82 (284)
T ss_dssp             HHEEEEEEE--------ECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred             cccceeeee--------ccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence            466777778        99999999985321000000011111112246689999999999999999998865       


Q ss_pred             ---------CCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         89 ---------DQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        89 ---------~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                               ...++++|||+++|+|.+++...  ..+++..+..++
T Consensus        83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~  128 (284)
T 2a19_B           83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF  128 (284)
T ss_dssp             ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHH
T ss_pred             ccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHH
Confidence                     34589999999999999999865  568877665543

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.24  E-value=1.6e-13  Score=92.53  Aligned_cols=90  Identities=16%  Similarity=0.163  Sum_probs=64.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFY   83 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~   83 (125)
                      .+.|++.+.|        |.|+||.||++...          .+++.............+.+|+.++..+ +||||++++
T Consensus        26 ~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~   97 (316)
T 2xir_A           26 RDRLKLGKPL--------GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL   97 (316)
T ss_dssp             GGGEEEEEEE--------EECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             hhheeeeeEE--------cCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence            3466666777        99999999985310          1111111111112223567899999998 799999999


Q ss_pred             eeEEeCC-eEEEEEEecCCCCHHHHHHHcC
Q psy14717         84 GAFISDQ-DISICMEYMDGGSLDLILKKAG  112 (125)
Q Consensus        84 ~~~~~~~-~~~iv~e~~~~GsL~~~l~~~~  112 (125)
                      +++...+ .++++|||+++|+|.+++....
T Consensus        98 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~  127 (316)
T 2xir_A           98 GACTKPGGPLMVIVEFCKFGNLSTYLRSKR  127 (316)
T ss_dssp             EEECCTTSCCEEEEECCTTEEHHHHHHTCT
T ss_pred             EEEecCCCceEEEEEcCCCCcHHHHHHhcc
Confidence            9987754 4999999999999999998754

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.24  E-value=6.3e-13  Score=90.21  Aligned_cols=100  Identities=16%  Similarity=0.168  Sum_probs=71.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-------cHHhhhHHHHHHHHHhcCCCceeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-------DLKTLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-------~~~~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      .+.|++.+.|        |.|+||.||++...     .+++.......       ......+.+|+.+++.++||||+++
T Consensus         9 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   80 (322)
T 2ycf_A            9 RDEYIMSKTL--------GSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKI   80 (322)
T ss_dssp             HHHEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCE
T ss_pred             hhceeEeeEE--------ecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceE
Confidence            3567777788        99999999985331     11111111100       0111246689999999999999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++..++ .+++|||+++|+|.+++.....+++..+..++
T Consensus        81 ~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~  120 (322)
T 2ycf_A           81 KNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYF  120 (322)
T ss_dssp             EEEEESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHH
T ss_pred             eeEEcCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHH
Confidence            99987665 89999999999999999887788887766554

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.23  E-value=1.6e-12  Score=89.56  Aligned_cols=101  Identities=21%  Similarity=0.272  Sum_probs=74.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCcc---ccHHhhhHHHHHHHHHhc-CCCceeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSER---ADLKTLSATTILKVLHEC-NFAHIVGF   82 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~---~~~~~~~~~~e~~~~~~~-~h~~iv~~   82 (125)
                      .+.|++++.|        |.|+||.||++...        .+++......   .......+.+|+.++..+ +|+||+.+
T Consensus        53 ~~~y~~~~~l--------G~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~  124 (355)
T 1vzo_A           53 IENFELLKVL--------GTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTL  124 (355)
T ss_dssp             GGGEEEEEEE--------EETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCE
T ss_pred             ccceEEEEEe--------ccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEE
Confidence            4678888888        99999999974320        0111111000   001112355799999998 79999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++...+.++++|||+++|+|.+++.+...+++..++.++
T Consensus       125 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~  165 (355)
T 1vzo_A          125 HYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYV  165 (355)
T ss_dssp             EEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHH
T ss_pred             EEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHH
Confidence            99999999999999999999999999988889988776654

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.23  E-value=5.3e-13  Score=91.16  Aligned_cols=89  Identities=17%  Similarity=0.221  Sum_probs=64.8

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCcc----ccHHhhhHHHHHHHHHhcCCCceeeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSER----ADLKTLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~----~~~~~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      .....|++++.|        |.|+||.||++....     +++......    .......+.+|+.+++.++||||++++
T Consensus        23 ~~~~~y~~~~~l--------G~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~   94 (345)
T 3hko_A           23 ELQKKYHLKGAI--------GQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLY   94 (345)
T ss_dssp             HHHHHEEEEEEE--------EECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred             hhhhheeeccee--------eecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceee
Confidence            334567777778        999999999853210     111100000    001122567899999999999999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHH
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILK  109 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~  109 (125)
                      +++...+..+++||||++|+|.++++
T Consensus        95 ~~~~~~~~~~lv~e~~~gg~L~~~l~  120 (345)
T 3hko_A           95 EVYEDEQYICLVMELCHGGHLLDKLN  120 (345)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHEE
T ss_pred             hhhccCCeEEEEEeCCCCCcHHHHHH
Confidence            99999999999999999999999985

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.22  E-value=2.8e-12  Score=87.37  Aligned_cols=96  Identities=14%  Similarity=0.063  Sum_probs=71.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~   89 (125)
                      +.|++.+.|        |.|+||.||++...     .+++.....   .....+.+|+.+++.+ +|+||+.+++++...
T Consensus         9 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~   77 (330)
T 2izr_A            9 PNFRVGKKI--------GCGNFGELRLGKNLYTNEYVAIKLEPMK---SRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCG   77 (330)
T ss_dssp             TTEEEEEEC--------CC-CTTSEEEEEETTTTEEEEEEEEETT---CSSCCHHHHHHHHHHHCSCTTSCCEEEEEEET
T ss_pred             CCeEEEEEe--------eccCCceEEEEEECCCCcEEEEEEeccc---cchHHHHHHHHHHHHhhCCCCCCEEEEEEecC
Confidence            356777777        99999999985421     111111100   1112467899999999 999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ...+++|||+ +|+|.+++... +.+++..+..++
T Consensus        78 ~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~  111 (330)
T 2izr_A           78 KYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIA  111 (330)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHH
T ss_pred             CccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHH
Confidence            9999999999 88999999974 678888776654

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.22  E-value=1.2e-12  Score=96.93  Aligned_cols=99  Identities=19%  Similarity=0.161  Sum_probs=69.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      +.|++.+.|        |.|+||.||++...        .+++.............+.+|+.+++.++||||+++++++.
T Consensus       390 ~~y~i~~~L--------G~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~  461 (656)
T 2j0j_A          390 ERIELGRCI--------GEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT  461 (656)
T ss_dssp             GGEEEEEEE--------ECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccEEEeeEE--------eeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe
Confidence            455556666        99999999985321        11121111111122235678999999999999999999884


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHcC-CCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKAG-KIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~~-~l~~~~~~~~~  123 (125)
                       .+.+|++|||+++|+|.+++...+ .+++..+..++
T Consensus       462 -~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~  497 (656)
T 2j0j_A          462 -ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYA  497 (656)
T ss_dssp             -SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHH
T ss_pred             -cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHH
Confidence             456899999999999999998753 57777665543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.22  E-value=1.9e-12  Score=95.50  Aligned_cols=92  Identities=15%  Similarity=0.182  Sum_probs=67.7

Q ss_pred             CCCCCCchhHHHHHHH-------HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         31 KLPAGIFTDSFRDFVD-------RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~-------~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      .||.|+||.||++.+.       .+++....... ......+.+|+.++..++|+||+++++++.. +..++|||||.+|
T Consensus       376 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g  454 (635)
T 4fl3_A          376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELG  454 (635)
T ss_dssp             EEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTE
T ss_pred             EeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCC
Confidence            3699999999986321       11111111111 1112357789999999999999999998864 4589999999999


Q ss_pred             CHHHHHHHcCCCCHHHHhhhh
Q psy14717        103 SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|.++++....+++..+..++
T Consensus       455 ~L~~~l~~~~~l~~~~~~~i~  475 (635)
T 4fl3_A          455 PLNKYLQQNRHVKDKNIIELV  475 (635)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHH
T ss_pred             CHHHHHhhCCCCCHHHHHHHH
Confidence            999999988889988776654

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.22  E-value=1.5e-13  Score=95.99  Aligned_cols=100  Identities=19%  Similarity=0.196  Sum_probs=72.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      ..|++.+.|        |.|+||.||++.+.     .+++.............+.+|+.+++.++||||+++++++...+
T Consensus         9 ~~y~i~~~L--------G~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~   80 (396)
T 4eut_A            9 HLWLLSDIL--------GQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT   80 (396)
T ss_dssp             EEEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT
T ss_pred             CceEEEEEE--------EcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCC
Confidence            467777888        99999999985432     11111111111111124568999999999999999999998765


Q ss_pred             --eEEEEEEecCCCCHHHHHHHcC---CCCHHHHhhhh
Q psy14717         91 --DISICMEYMDGGSLDLILKKAG---KIPEHILGTIT  123 (125)
Q Consensus        91 --~~~iv~e~~~~GsL~~~l~~~~---~l~~~~~~~~~  123 (125)
                        ..+++||||++|+|.++++...   .+++..+..++
T Consensus        81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~  118 (396)
T 4eut_A           81 TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL  118 (396)
T ss_dssp             TCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHH
T ss_pred             CCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHH
Confidence              6899999999999999998653   28887776654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.22  E-value=3.2e-12  Score=88.43  Aligned_cols=92  Identities=15%  Similarity=0.136  Sum_probs=68.0

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCc--ccc-----HHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEe
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSE--RAD-----LKTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEY   98 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~--~~~-----~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~   98 (125)
                      ||.|+||.||++...     .+++.....  ...     .....+.+|+.++..+ +||||+.+++++......+++|||
T Consensus       102 lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~  181 (365)
T 2y7j_A          102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDL  181 (365)
T ss_dssp             EEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECC
T ss_pred             EecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEe
Confidence            499999999985431     111111100  000     0122456899999998 899999999999999999999999


Q ss_pred             cCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         99 MDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        99 ~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.+|+|.+++.....+++..+..++
T Consensus       182 ~~g~~L~~~l~~~~~l~~~~~~~i~  206 (365)
T 2y7j_A          182 MRKGELFDYLTEKVALSEKETRSIM  206 (365)
T ss_dssp             CTTCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            9999999999987789888776554

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.22  E-value=7.6e-13  Score=88.45  Aligned_cols=100  Identities=17%  Similarity=0.216  Sum_probs=71.1

Q ss_pred             chHHHHHH-HhhcCCCCCCCCCCchhHHHHHHH-------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         15 MAIFELLD-YIVNEPPPKLPAGIFTDSFRDFVD-------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        15 ~~~~~~~~-~i~~~~~~~lg~g~fg~v~~~~~~-------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      .+.|.+++ .|        |.|+||.||++...       .+++.............+.+|+.+++.++||||+++++++
T Consensus         8 ~~~~~i~~~~l--------g~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   79 (287)
T 1u59_A            8 RDNLLIADIEL--------GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC   79 (287)
T ss_dssp             GGGEEEEEEEE--------ECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HHHhhhhhccc--------cccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe
Confidence            44555655 66        99999999985321       1112111111112233577899999999999999999998


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                       ..+..+++|||+++|+|.+++... ..+++..+..++
T Consensus        80 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  116 (287)
T 1u59_A           80 -QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELL  116 (287)
T ss_dssp             -ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHH
T ss_pred             -cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHH
Confidence             555699999999999999999754 458887776654

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.22  E-value=4.7e-12  Score=85.17  Aligned_cols=94  Identities=21%  Similarity=0.299  Sum_probs=68.1

Q ss_pred             CCCCCCCchhHHHHHHH---HHhhcCCCc---cccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         30 PKLPAGIFTDSFRDFVD---RCLKKNPSE---RADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        30 ~~lg~g~fg~v~~~~~~---~~~~~~~~~---~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      ..||.|+||.||++...   .+++.....   ........+.+|+.+++.++||||+++++++...+..+++|||+++|+
T Consensus        37 ~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  116 (307)
T 2nru_A           37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS  116 (307)
T ss_dssp             CEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred             CccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCc
Confidence            34899999999986432   111111110   011122356789999999999999999999999999999999999999


Q ss_pred             HHHHHHHc---CCCCHHHHhhhh
Q psy14717        104 LDLILKKA---GKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~---~~l~~~~~~~~~  123 (125)
                      |.+++...   ..+++..+..++
T Consensus       117 L~~~l~~~~~~~~~~~~~~~~i~  139 (307)
T 2nru_A          117 LLDRLSCLDGTPPLSWHMRCKIA  139 (307)
T ss_dssp             HHHHHHTGGGCCCCCHHHHHHHH
T ss_pred             HHHHHHhccCCCCCCHHHHHHHH
Confidence            99999843   457777665543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.21  E-value=4.9e-13  Score=94.15  Aligned_cols=99  Identities=16%  Similarity=0.201  Sum_probs=69.6

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCcc-------ccHHhhhHHHHHHHHHhcCCCceeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSER-------ADLKTLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~-------~~~~~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      +.|++.+.|        |+|+||.||++....     +++......       .......+.+|+.+++.++||||++++
T Consensus       135 ~~y~~~~~L--------G~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~  206 (419)
T 3i6u_A          135 DEYIMSKTL--------GSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIK  206 (419)
T ss_dssp             TTEEEEEEE--------EECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCC
T ss_pred             ccEEEEeEE--------eeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEE
Confidence            345566666        999999999853311     111111100       001112467899999999999999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++. .+..+++||||++|+|.+++...+.+++..++.++
T Consensus       207 ~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~  245 (419)
T 3i6u_A          207 NFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF  245 (419)
T ss_dssp             EEEE-SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHH
T ss_pred             EEEe-cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHH
Confidence            9875 45689999999999999999887889988776654

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.21  E-value=7.6e-13  Score=90.03  Aligned_cols=102  Identities=22%  Similarity=0.210  Sum_probs=72.4

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      .....|++++.|        |.|+||.||++...         .+++.... ........+.+|+.+++.++|+||++++
T Consensus        38 ~~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~  108 (326)
T 2w1i_A           38 FEERHLKFLQQL--------GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH-STEEHLRDFEREIEILKSLQHDNIVKYK  108 (326)
T ss_dssp             CCGGGEEEEEEE--------ECCSSEEEEEEEECTTSSSCCEEEEEEEESS-CCSHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             cCHHHceeeeee--------ccCCCeEEEEEEeccccCCCceEEEEEEecc-CCHHHHHHHHHHHHHHHhCCCCCeeeEE
Confidence            344567788888        99999999985310         11111111 1112223567899999999999999999


Q ss_pred             eeEEeCC--eEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         84 GAFISDQ--DISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~--~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +++...+  .++++|||+++|+|.+++... ..+++..+..++
T Consensus       109 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~  151 (326)
T 2w1i_A          109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT  151 (326)
T ss_dssp             EEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHH
T ss_pred             EEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHH
Confidence            9887654  689999999999999999886 458877766543

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.21  E-value=3.4e-12  Score=85.82  Aligned_cols=97  Identities=22%  Similarity=0.294  Sum_probs=70.3

Q ss_pred             CchHHHHH-HHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHH----hhhHHHHHHHH-HhcCCCceeeeeeeEE
Q psy14717         14 PMAIFELL-DYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLK----TLSATTILKVL-HECNFAHIVGFYGAFI   87 (125)
Q Consensus        14 ~~~~~~~~-~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~----~~~~~~e~~~~-~~~~h~~iv~~~~~~~   87 (125)
                      ..+.|.++ +.+        |.|+||.||++..     .......+.+    .....+|+.++ +..+||||+++++++.
T Consensus        15 ~~~~y~~~~~~l--------g~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~   81 (299)
T 3m2w_A           15 IIDDYKVTSQVL--------GLGINGKVLQIFN-----KRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYE   81 (299)
T ss_dssp             GGGTEEEEEEEE--------EEETTEEEEEEEE-----TTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             cccchhhcCccc--------ccCCCeEEEEEEE-----cCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhh
Confidence            34566666 456        9999999998432     2222222221    12456788877 4579999999999998


Q ss_pred             e----CCeEEEEEEecCCCCHHHHHHHcC--CCCHHHHhhhh
Q psy14717         88 S----DQDISICMEYMDGGSLDLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus        88 ~----~~~~~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~~  123 (125)
                      .    ...++++|||+++|+|.+++....  .+++..+..++
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~  123 (299)
T 3m2w_A           82 NLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM  123 (299)
T ss_dssp             EEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHH
T ss_pred             hhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHH
Confidence            7    667999999999999999999863  58888776654

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.21  E-value=9.1e-13  Score=90.95  Aligned_cols=100  Identities=10%  Similarity=0.134  Sum_probs=68.6

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH------HhhhHHHHHHHHHhcC---CCceeeeeeeE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL------KTLSATTILKVLHECN---FAHIVGFYGAF   86 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------~~~~~~~e~~~~~~~~---h~~iv~~~~~~   86 (125)
                      ..|++.+.|        |.|+||.||++..............+.      ....+.+|+.++..+.   |+|++.+++.+
T Consensus        65 ~~y~~~~~l--------G~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~  136 (365)
T 3e7e_A           65 KLVYVHHLL--------GEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAH  136 (365)
T ss_dssp             SEEEEEEEE--------EECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEE
T ss_pred             EEEEEEEEe--------eccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheee
Confidence            345555666        999999999862100000111111111      1124556777777765   99999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHH-----cCCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKK-----AGKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~-----~~~l~~~~~~~~~  123 (125)
                      ...+..++|||||++|+|.++++.     ...+++..+..++
T Consensus       137 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~  178 (365)
T 3e7e_A          137 LFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFA  178 (365)
T ss_dssp             ECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHH
T ss_pred             ecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHH
Confidence            999999999999999999999985     3568887776665

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.21  E-value=6.2e-13  Score=87.74  Aligned_cols=100  Identities=16%  Similarity=0.232  Sum_probs=74.5

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ..+.|++.+.+        |.|+||.||++...    .+++......  .....+.+|+.+++.++||||+++++++...
T Consensus         6 ~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   75 (267)
T 3t9t_A            6 DPSELTFVQEI--------GSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ   75 (267)
T ss_dssp             CGGGEEEEEEE--------EEETTEEEEEEEETTTEEEEEEEECTTT--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             chhheeeeeEe--------cCCCceeEEEEEecCCCeEEEEEccccC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence            34567777888        99999999985431    1111111111  1123567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +..+++|||+++|+|.+++... ..+++..+..++
T Consensus        76 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~  110 (267)
T 3t9t_A           76 APICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMC  110 (267)
T ss_dssp             SSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHH
T ss_pred             CCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHH
Confidence            9999999999999999999875 457887766554

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.21  E-value=7.6e-13  Score=93.97  Aligned_cols=99  Identities=19%  Similarity=0.216  Sum_probs=72.1

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.+.|++.+.|        |.|+||.||++...    .+++......  .....+.+|+.+++.++||||+++++++.. 
T Consensus       182 ~~~~~~~~~~l--------G~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-  250 (452)
T 1fmk_A          182 PRESLRLEVKL--------GQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-  250 (452)
T ss_dssp             CGGGEEEEEEE--------EECSSCEEEEEEETTTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred             ChhHceeeeee--------cCCCCeEEEEEEECCCceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-
Confidence            34567777777        99999999986432    1222211111  112356789999999999999999998865 


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      +.++|+||||.+|+|.++++..  ..+++..+..++
T Consensus       251 ~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~  286 (452)
T 1fmk_A          251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA  286 (452)
T ss_dssp             SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHH
T ss_pred             CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHH
Confidence            6689999999999999999753  458877766554

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.20  E-value=1.6e-12  Score=91.73  Aligned_cols=101  Identities=17%  Similarity=0.221  Sum_probs=75.9

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCc-cccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSE-RADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      ..+.|++++.|        |.|+||.||++...     .++++.... ........+.+|+.+++.++|+||+++++++.
T Consensus        24 i~~~y~~~~~l--------G~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~   95 (432)
T 3n9x_A           24 VPDNYIIKHLI--------GRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLII   95 (432)
T ss_dssp             CCTTEEEEEEE--------EEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECC
T ss_pred             ecCCEEEEEEE--------eecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEe
Confidence            34678888888        99999999986432     122221111 11122235678999999999999999999998


Q ss_pred             eC-----CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         88 SD-----QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        88 ~~-----~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..     ..+|++|||+.+ +|.++++....+++..++.++
T Consensus        96 ~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~l~~~~~~~i~  135 (432)
T 3n9x_A           96 PDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTIL  135 (432)
T ss_dssp             CSCTTTCCCEEEEEECCSE-EHHHHHHSSCCCCHHHHHHHH
T ss_pred             cCCCCcCCeEEEEEecCCc-CHHHHHhccCCCCHHHHHHHH
Confidence            76     569999999986 999999987789998887665

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.20  E-value=3.7e-13  Score=90.42  Aligned_cols=101  Identities=10%  Similarity=0.126  Sum_probs=69.7

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-------------------------cHHhhh
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-------------------------DLKTLS   63 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-------------------------~~~~~~   63 (125)
                      ..+.|++.+.|        |.|+||.||++...     .+++.......                         ......
T Consensus        11 ~~~~y~~~~~l--------G~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (298)
T 2zv2_A           11 QLNQYTLKDEI--------GKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQ   82 (298)
T ss_dssp             EETTEEEEEEE--------EC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CH
T ss_pred             eecceEEEeEE--------eecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHH
Confidence            45688888888        99999999986421     11111111000                         001124


Q ss_pred             HHHHHHHHHhcCCCceeeeeeeEEe--CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         64 ATTILKVLHECNFAHIVGFYGAFIS--DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        64 ~~~e~~~~~~~~h~~iv~~~~~~~~--~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.+|+.+++.++||||+++++++..  ...++++|||+++|+|.+++.. +.+++..+..++
T Consensus        83 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~  143 (298)
T 2zv2_A           83 VYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-KPLSEDQARFYF  143 (298)
T ss_dssp             HHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-SCCCHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-CCCCHHHHHHHH
Confidence            6789999999999999999999987  5679999999999999886554 568887766554

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.19  E-value=3.1e-12  Score=88.05  Aligned_cols=90  Identities=17%  Similarity=0.238  Sum_probs=65.4

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCc--cccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSE--RADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~--~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      |.|+||.||++...     .+++.....  ........+.+|+.+++.++||||+++++++..++..+++|||+.+ +|.
T Consensus        63 G~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~g-~l~  141 (348)
T 1u5q_A           63 GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SAS  141 (348)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE-EHH
T ss_pred             ccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCCC-CHH
Confidence            99999999985421     112211111  1111223567899999999999999999999999999999999985 888


Q ss_pred             HHHHH-cCCCCHHHHhhhh
Q psy14717        106 LILKK-AGKIPEHILGTIT  123 (125)
Q Consensus       106 ~~l~~-~~~l~~~~~~~~~  123 (125)
                      +++.. ...+++..+..++
T Consensus       142 ~~l~~~~~~l~~~~~~~i~  160 (348)
T 1u5q_A          142 DLLEVHKKPLQEVEIAAVT  160 (348)
T ss_dssp             HHHHHHTSCCCHHHHHHHH
T ss_pred             HHHHHhcCCCCHHHHHHHH
Confidence            88864 3678887766554

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.19  E-value=1.3e-12  Score=88.50  Aligned_cols=103  Identities=16%  Similarity=0.212  Sum_probs=69.6

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH--------HhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR--------CLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~--------~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      .+.+.|++.+.|        |+|+||.||++.+..        +++...... .......+.+|+.+++.++||||++++
T Consensus        20 i~~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~   91 (323)
T 3qup_A           20 IPEQQFTLGRML--------GKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLV   91 (323)
T ss_dssp             CC---CEEEEEE--------EEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCC
T ss_pred             cChhHeEEecee--------cccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhh
Confidence            344567777888        999999999754321        222221111 112233577899999999999999999


Q ss_pred             eeEEeCCeE------EEEEEecCCCCHHHHHHHcC------CCCHHHHhhhh
Q psy14717         84 GAFISDQDI------SICMEYMDGGSLDLILKKAG------KIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~------~iv~e~~~~GsL~~~l~~~~------~l~~~~~~~~~  123 (125)
                      +++......      +++|||+.+|+|.+++....      .+++..+..++
T Consensus        92 ~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~  143 (323)
T 3qup_A           92 GVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM  143 (323)
T ss_dssp             EEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHH
T ss_pred             ceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHH
Confidence            999877654      99999999999999997642      47877766554

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.19  E-value=1.5e-12  Score=92.31  Aligned_cols=99  Identities=14%  Similarity=0.238  Sum_probs=65.7

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCc-cccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSE-RADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.|++++.|        |.|+||.||++.+.     .++++.... ........+.+|+.+++.++|+||+++++++...
T Consensus        53 ~~y~~~~~l--------G~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  124 (458)
T 3rp9_A           53 DRYEIRHLI--------GTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPK  124 (458)
T ss_dssp             TTEEECCC---------------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS
T ss_pred             CCeEEeeEe--------eecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecC
Confidence            457777777        99999999985321     122221111 1112233567899999999999999999998543


Q ss_pred             -----CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 -----QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 -----~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                           ..+|++|||+. |+|.++++....+++..++.++
T Consensus       125 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~  162 (458)
T 3rp9_A          125 DVEKFDELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLL  162 (458)
T ss_dssp             CTTTCCCEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHH
T ss_pred             CcccCceEEEEEeccc-cchhhhcccCCCCCHHHHHHHH
Confidence                 46999999986 5999999987789998887665

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.18  E-value=8.4e-13  Score=93.76  Aligned_cols=98  Identities=19%  Similarity=0.201  Sum_probs=70.6

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      .+.|++.+.|        |.|+||.||++...    .+++.....  ......+.+|+.+++.++||||+++++++. .+
T Consensus       187 ~~~~~~~~~l--------G~G~fg~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~  255 (454)
T 1qcf_A          187 RESLKLEKKL--------GAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KE  255 (454)
T ss_dssp             GGGEEEEEEE--------ECCSSEEEEEEEETTTEEEEEEEECTT--SBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SS
T ss_pred             hHHeEEEEEc--------ccCCceEEEEEEECCccEEEEEEecCC--CccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CC
Confidence            4566677777        99999999986432    111111111  112235778999999999999999999886 56


Q ss_pred             eEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      .++++||||.+|+|.++++..  ..+++..+..++
T Consensus       256 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~  290 (454)
T 1qcf_A          256 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS  290 (454)
T ss_dssp             SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHH
T ss_pred             ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHH
Confidence            789999999999999999854  357776655443

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.18  E-value=2.5e-12  Score=86.89  Aligned_cols=100  Identities=10%  Similarity=0.040  Sum_probs=69.8

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe-
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS-   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~-   88 (125)
                      .+.|++++.|        |.|+||.||++...     .+++.... ........+.+|+.+++.++||||+++++++.. 
T Consensus        28 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   98 (317)
T 2buj_A           28 NKHYLFIQKL--------GEGGFSYVDLVEGLHDGHFYALKRILC-HEQQDREEAQREADMHRLFNHPNILRLVAYCLRE   98 (317)
T ss_dssp             TEEEEEEEEE--------EC--CEEEEEEEETTTCCEEEEEEEEE-SSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE
T ss_pred             CeEEEEEEEe--------cCCCCeEEEEEEecCCCcEEEEEEEec-CCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec
Confidence            3467788888        99999999985321     01111000 011222356789999999999999999999873 


Q ss_pred             ---CCeEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhhh
Q psy14717         89 ---DQDISICMEYMDGGSLDLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus        89 ---~~~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~~  123 (125)
                         ....+++|||+.+|+|.+++...    ..+++..+..++
T Consensus        99 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~  140 (317)
T 2buj_A           99 RGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL  140 (317)
T ss_dssp             ETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHH
T ss_pred             cCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHH
Confidence               34699999999999999999872    568887776554

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.18  E-value=4e-13  Score=91.04  Aligned_cols=102  Identities=16%  Similarity=0.260  Sum_probs=74.1

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      ...+.|++++.|        |.|+||.||++...    .+++........ .....+.+|+.+++.++||||+++++++.
T Consensus        18 ~l~~~y~~~~~l--------G~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~   89 (311)
T 3niz_A           18 GLMEKYQKLEKV--------GEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIH   89 (311)
T ss_dssp             CSSCEEEEEEEE--------EECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             chHhhhHhhhhc--------cCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEc
Confidence            445688899999        99999999986431    111111111111 11224668999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ++..++++|||+.+ +|.+++... ..+++..++.++
T Consensus        90 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~  125 (311)
T 3niz_A           90 SERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYL  125 (311)
T ss_dssp             CSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHH
T ss_pred             cCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHH
Confidence            99999999999996 888888765 458887776654

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.18  E-value=9.7e-13  Score=97.41  Aligned_cols=101  Identities=17%  Similarity=0.187  Sum_probs=71.1

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe-
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS-   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~-   88 (125)
                      .+.|++.+.|        |.|+||.||++.+.     .+++.............+.+|+.+++.++||||+++++++.. 
T Consensus        13 ~grY~i~~~L--------G~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~   84 (676)
T 3qa8_A           13 CGPWEMKERL--------GTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGL   84 (676)
T ss_dssp             ----CCCCCC--------CBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTT
T ss_pred             CCCeEEEEEE--------eeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeeccc
Confidence            3678888888        99999999986432     122222221122223357789999999999999999988755 


Q ss_pred             -----CCeEEEEEEecCCCCHHHHHHHcC---CCCHHHHhhhh
Q psy14717         89 -----DQDISICMEYMDGGSLDLILKKAG---KIPEHILGTIT  123 (125)
Q Consensus        89 -----~~~~~iv~e~~~~GsL~~~l~~~~---~l~~~~~~~~~  123 (125)
                           .+..+++||||++|+|.+++....   .+++..+..++
T Consensus        85 ~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~  127 (676)
T 3qa8_A           85 QKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLL  127 (676)
T ss_dssp             CCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHH
T ss_pred             ccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHH
Confidence                 567899999999999999998753   57776665543

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.18  E-value=5.2e-12  Score=84.25  Aligned_cols=100  Identities=16%  Similarity=0.122  Sum_probs=71.1

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc--cHHh----hhHHHHHHHHHhcCCCceeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA--DLKT----LSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~--~~~~----~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      ..+.|++.+.|        |.|+||.||++...     .+++.......  ....    ..+.+|+.+++.++|+||+++
T Consensus        17 ~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~   88 (287)
T 4f0f_A           17 ADNEIEYEKQI--------GKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKL   88 (287)
T ss_dssp             CSTTEEEEEEC--------CCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCE
T ss_pred             hhccceehhcc--------ccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhh
Confidence            34578888888        99999999985431     12222111100  0110    356789999999999999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ++++....  +++|||+++|+|.+++... ..+++..+..++
T Consensus        89 ~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  128 (287)
T 4f0f_A           89 YGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM  128 (287)
T ss_dssp             EEEETTTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHH
T ss_pred             heeecCCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHH
Confidence            99987665  7999999999999988765 468877766554

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.18  E-value=1.4e-12  Score=88.83  Aligned_cols=100  Identities=12%  Similarity=0.181  Sum_probs=71.9

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----H-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----R-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      .+.|+.++.|        |.|+||.||++.+.    .     +++.............+.+|+.+++.++||||++++++
T Consensus        14 ~~~y~~~~~l--------G~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   85 (327)
T 3poz_A           14 ETEFKKIKVL--------GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI   85 (327)
T ss_dssp             GGGEEEEEEE--------EEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEE
T ss_pred             HHHcccceEE--------eeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence            4577888888        99999999986421    0     11111111111122356789999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +..+. .++++||+.+|+|.+++... ..+++..+..++
T Consensus        86 ~~~~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~  123 (327)
T 3poz_A           86 CLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC  123 (327)
T ss_dssp             EESSS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHH
T ss_pred             EecCC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHH
Confidence            98765 78999999999999999885 568887766554

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.18  E-value=4.7e-12  Score=85.83  Aligned_cols=101  Identities=22%  Similarity=0.428  Sum_probs=73.2

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeeeeE
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYGAF   86 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~   86 (125)
                      ...+.|++++.|        |.|+||.||++...     .+++....  .......+.+|+.+++.+ +|+||+++++++
T Consensus        21 ~~~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   90 (326)
T 2x7f_A           21 DPAGIFELVELV--------GNGTYGQVYKGRHVKTGQLAAIKVMDV--TGDEEEEIKQEINMLKKYSHHRNIATYYGAF   90 (326)
T ss_dssp             CCTTTEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEEC--CSSTTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred             CCCCcEEEEEEe--------ccCCCEEEEEEEECCCCCeEEEEEEec--CcccHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence            344577777888        99999999985431     11111111  011223567899999998 899999999999


Q ss_pred             Ee------CCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         87 IS------DQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        87 ~~------~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      ..      .+.++++|||+.+|+|.+++...  ..+++..+..++
T Consensus        91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~  135 (326)
T 2x7f_A           91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYIC  135 (326)
T ss_dssp             EECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHH
T ss_pred             eeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHH
Confidence            87      46799999999999999999875  468887766554

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.18  E-value=8.2e-13  Score=89.27  Aligned_cols=96  Identities=22%  Similarity=0.287  Sum_probs=68.7

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      ....|++.+.|        |+|+||.||++...   .+++...   .......+.+|+.+++.++||||+++++++.+  
T Consensus         6 ~~~~~~~~~~l--------g~G~~g~V~~~~~~~~~vavK~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--   72 (307)
T 2eva_A            6 DYKEIEVEEVV--------GRGAFGVVCKAKWRAKDVAIKQIE---SESERKAFIVELRQLSRVNHPNIVKLYGACLN--   72 (307)
T ss_dssp             CGGGEEEEEEE--------ECCSSSEEEEEEETTEEEEEEECS---STTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--
T ss_pred             CHhHeeeeeEe--------ecCCCceEEEEEECCeeEEEEEec---ChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--
Confidence            34577777888        99999999985432   0111111   11222356789999999999999999998763  


Q ss_pred             eEEEEEEecCCCCHHHHHHHcCC---CCHHHHhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAGK---IPEHILGTI  122 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~~---l~~~~~~~~  122 (125)
                      ..+++|||+++|+|.+++.....   +++..+..+
T Consensus        73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  107 (307)
T 2eva_A           73 PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW  107 (307)
T ss_dssp             TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHH
T ss_pred             CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHH
Confidence            47999999999999999987543   555554443

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.17  E-value=4.5e-12  Score=86.18  Aligned_cols=100  Identities=16%  Similarity=0.195  Sum_probs=73.1

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHH----H-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFV----D-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~----~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      ...|++++.|        |.|+||.||++.+    .     .+++..... .......+.+|+.+++.++|+||++++++
T Consensus        22 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~   92 (327)
T 3lxl_A           22 ERHLKYISQL--------GKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSDFIVKYRGV   92 (327)
T ss_dssp             GGGEEEEEEE--------EEETTEEEEEEEECTTSSSCSEEEEEEEESSC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred             hhhhhhhhhc--------cCCCCeEEEEEEeccCCCCcceEEEEEEeccC-CHHHHHHHHHHHHHHHhcCCCceeEEEEE
Confidence            4578888888        9999999998531    0     111111111 11122346789999999999999999998


Q ss_pred             EEe--CCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         86 FIS--DQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~--~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +..  ...++++|||+++|+|.+++... ..+++..+..++
T Consensus        93 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~  133 (327)
T 3lxl_A           93 SYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS  133 (327)
T ss_dssp             EECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHH
T ss_pred             EecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHH
Confidence            874  56699999999999999999874 458887776654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.17  E-value=8.5e-13  Score=95.54  Aligned_cols=99  Identities=19%  Similarity=0.220  Sum_probs=72.0

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ..+.|++.+.|        |+|+||.||++.+..    +++.....  ......+.+|+.+++.++|+||+++++++.. 
T Consensus       265 ~~~~~~~~~~l--------G~G~fg~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-  333 (535)
T 2h8h_A          265 PRESLRLEVKL--------GQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-  333 (535)
T ss_dssp             CGGGEEEEEEE--------EECSSEEEEEEEETTTEEEEEEEECTT--SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred             chhhhhhheec--------ccCCCeEEEEEEECCCceEEEEEeCCC--CCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-
Confidence            34567777777        999999999864321    11111111  1112357789999999999999999998865 


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      +.+|||||||.+|+|.++++..  ..+++..+..++
T Consensus       334 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~  369 (535)
T 2h8h_A          334 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA  369 (535)
T ss_dssp             SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHH
T ss_pred             ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHH
Confidence            6689999999999999999753  458877766554

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.17  E-value=1.1e-12  Score=87.91  Aligned_cols=92  Identities=12%  Similarity=0.119  Sum_probs=65.0

Q ss_pred             CCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE-eCCeEEEEEEecCCC
Q psy14717         32 LPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI-SDQDISICMEYMDGG  102 (125)
Q Consensus        32 lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~-~~~~~~iv~e~~~~G  102 (125)
                      ||.|+||.||++...        .+++.............+.+|+.+++.++||||+++++++. .++..+++|||+.+|
T Consensus        33 lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~  112 (298)
T 3f66_A           33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG  112 (298)
T ss_dssp             EEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTC
T ss_pred             eeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCC
Confidence            399999999975421        11111111111122235678999999999999999999864 456789999999999


Q ss_pred             CHHHHHHHc-CCCCHHHHhhhh
Q psy14717        103 SLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +|.++++.. ..+++..+..++
T Consensus       113 ~L~~~l~~~~~~~~~~~~~~i~  134 (298)
T 3f66_A          113 DLRNFIRNETHNPTVKDLIGFG  134 (298)
T ss_dssp             BHHHHHHCTTCCCCHHHHHHHH
T ss_pred             CHHHHHHhcccCCCHHHHHHHH
Confidence            999999864 457777665543

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.16  E-value=3.6e-13  Score=91.39  Aligned_cols=91  Identities=19%  Similarity=0.316  Sum_probs=66.4

Q ss_pred             CCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHH
Q psy14717         32 LPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI  107 (125)
Q Consensus        32 lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~  107 (125)
                      ||.|+||.||++...    .+++..... .......+.+|+.+++.++||||+++++++...+..+++|||+++|+|.++
T Consensus        47 lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  125 (321)
T 2qkw_B           47 IGHGVFGKVYKGVLRDGAKVALKRRTPE-SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH  125 (321)
T ss_dssp             SCBCSSSEEEEEECTTCCEEEEEECCSC-CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGG
T ss_pred             eecCCCeeEEEEEECCCCEEEEEEeccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHH
Confidence            499999999986431    111111111 111223567899999999999999999999999999999999999999999


Q ss_pred             HHHcC----CCCHHHHhhhh
Q psy14717        108 LKKAG----KIPEHILGTIT  123 (125)
Q Consensus       108 l~~~~----~l~~~~~~~~~  123 (125)
                      +....    .+++..+..++
T Consensus       126 l~~~~~~~~~~~~~~~~~i~  145 (321)
T 2qkw_B          126 LYGSDLPTMSMSWEQRLEIC  145 (321)
T ss_dssp             SSSSCCCSCCCCHHHHHHHH
T ss_pred             HhccCCCccccCHHHHHHHH
Confidence            87642    47776665543

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.16  E-value=4.1e-12  Score=84.95  Aligned_cols=97  Identities=19%  Similarity=0.280  Sum_probs=68.6

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe--
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS--   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~--   88 (125)
                      +.|++++.+        |.|+||.||++....     +++..  .........+.+|+.+++.++|||++++++.+..  
T Consensus         6 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~--~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   75 (303)
T 1zy4_A            6 SDFEEIAVL--------GQGAFGQVVKARNALDSRYYAIKKI--RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERR   75 (303)
T ss_dssp             HHEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEE--EEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECC
T ss_pred             ccchhhhee--------ccCCcEEEEEEEEcCCCeEEEEEEE--eccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhc
Confidence            466777777        999999999853210     11111  1111122356789999999999999999998865  


Q ss_pred             -----------CCeEEEEEEecCCCCHHHHHHHcC-CCCHHHHhhh
Q psy14717         89 -----------DQDISICMEYMDGGSLDLILKKAG-KIPEHILGTI  122 (125)
Q Consensus        89 -----------~~~~~iv~e~~~~GsL~~~l~~~~-~l~~~~~~~~  122 (125)
                                 ...++++|||+++|+|.+++.... .+++..+..+
T Consensus        76 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i  121 (303)
T 1zy4_A           76 NFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL  121 (303)
T ss_dssp             CCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHH
T ss_pred             chhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHH
Confidence                       356899999999999999998753 4566555443

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.16  E-value=7.1e-12  Score=83.75  Aligned_cols=91  Identities=22%  Similarity=0.275  Sum_probs=65.3

Q ss_pred             CCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         31 KLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      .||.|+||.||++...     .+++..... .......+.+|+.+++.++|+||+++++++...+..+++|||+++|+|.
T Consensus        29 ~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  107 (295)
T 2clq_A           29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPER-DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS  107 (295)
T ss_dssp             EEEECSSSEEEEEEETTTCCEEEEEEEECC-CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred             EEeecCcEEEEEEEECCCCeEEEEEEccCC-chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence            3499999999985431     111111111 1112235678999999999999999999999999999999999999999


Q ss_pred             HHHHHcC---CCCHHHHhhh
Q psy14717        106 LILKKAG---KIPEHILGTI  122 (125)
Q Consensus       106 ~~l~~~~---~l~~~~~~~~  122 (125)
                      +++....   .+++..+..+
T Consensus       108 ~~l~~~~~~~~~~~~~~~~~  127 (295)
T 2clq_A          108 ALLRSKWGPLKDNEQTIGFY  127 (295)
T ss_dssp             HHHHHTTCCCTTCHHHHHHH
T ss_pred             HHHHhhccCCCccHHHHHHH
Confidence            9998752   3456655543

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.16  E-value=2.3e-12  Score=87.86  Aligned_cols=97  Identities=16%  Similarity=0.157  Sum_probs=69.1

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCcccc-HHhhhHHHHHHHHHh--cCCCceeeeeeeEEeCC--
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERAD-LKTLSATTILKVLHE--CNFAHIVGFYGAFISDQ--   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~--~~h~~iv~~~~~~~~~~--   90 (125)
                      +.|++.+.|        |.|+||.||++....  +....+... .....+.+|.+++..  ++||||+++++++....  
T Consensus        42 ~~y~~~~~l--------g~G~~g~Vy~~~~~~--~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~  111 (342)
T 1b6c_B           42 RTIVLQESI--------GKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGT  111 (342)
T ss_dssp             HHCEEEEEE--------EEETTEEEEEEEETT--EEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS
T ss_pred             ccEEEEeee--------cCCCCcEEEEEEEcC--ccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc
Confidence            355566666        999999999854310  000111111 112245678888887  79999999999998876  


Q ss_pred             --eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         91 --DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        91 --~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                        .++++|||+++|+|.+++++ ..+++..+..++
T Consensus       112 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~  145 (342)
T 1b6c_B          112 WTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLA  145 (342)
T ss_dssp             CCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHH
T ss_pred             cceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHH
Confidence              79999999999999999987 468877766554

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.15  E-value=8.1e-12  Score=87.49  Aligned_cols=87  Identities=25%  Similarity=0.331  Sum_probs=63.5

Q ss_pred             CCCCCchhHHHHHHHHHhhcCCCccccHH----hhhHHHHHHHHHh-cCCCceeeeeeeEEe----CCeEEEEEEecCCC
Q psy14717         32 LPAGIFTDSFRDFVDRCLKKNPSERADLK----TLSATTILKVLHE-CNFAHIVGFYGAFIS----DQDISICMEYMDGG  102 (125)
Q Consensus        32 lg~g~fg~v~~~~~~~~~~~~~~~~~~~~----~~~~~~e~~~~~~-~~h~~iv~~~~~~~~----~~~~~iv~e~~~~G  102 (125)
                      ||.|+||.||++.     .+......+.+    .....+|+.++.. .+|+||+++++++..    ...+|||||||.+|
T Consensus        70 LG~G~~g~V~~~~-----~~~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg  144 (400)
T 1nxk_A           70 LGLGINGKVLQIF-----NKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGG  144 (400)
T ss_dssp             EEEETTEEEEEEE-----ETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSE
T ss_pred             eeeccCeEEEEEE-----ECCCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCC
Confidence            4999999999843     22222222222    1245578887754 689999999999876    56799999999999


Q ss_pred             CHHHHHHHcC--CCCHHHHhhhh
Q psy14717        103 SLDLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~--~l~~~~~~~~~  123 (125)
                      +|.+++...+  .+++..++.++
T Consensus       145 ~L~~~l~~~~~~~l~~~~~~~i~  167 (400)
T 1nxk_A          145 ELFSRIQDRGDQAFTEREASEIM  167 (400)
T ss_dssp             EHHHHHHCC---CCBHHHHHHHH
T ss_pred             cHHHHHHHhCCCCCCHHHHHHHH
Confidence            9999998753  58888776654

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.15  E-value=8.9e-13  Score=88.21  Aligned_cols=98  Identities=18%  Similarity=0.278  Sum_probs=71.1

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISDQD   91 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~   91 (125)
                      .|++++.|        |+|+||.||++...    .+++........ .....+.+|+.+++.++||||+++++++...+.
T Consensus         3 ~y~~~~~l--------g~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   74 (288)
T 1ob3_A            3 KYHGLEKI--------GEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKR   74 (288)
T ss_dssp             SEEEEEEE--------EEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSC
T ss_pred             cchhhhhc--------ccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCe
Confidence            46666777        99999999985431    111111111111 111245689999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ++++|||+.+ +|.+++... +.+++..++.++
T Consensus        75 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~  106 (288)
T 1ob3_A           75 LVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFL  106 (288)
T ss_dssp             EEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHH
T ss_pred             EEEEEEecCC-CHHHHHHhcccCCCHHHHHHHH
Confidence            9999999997 999999875 568887766553

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.15  E-value=3.3e-13  Score=91.86  Aligned_cols=98  Identities=18%  Similarity=0.291  Sum_probs=69.0

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD   91 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~   91 (125)
                      .|++++.|        |.|+||.||++...     .+++.............+.+|+.+++.++|+||+++++++...+.
T Consensus         3 ~y~~~~~l--------G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   74 (324)
T 3mtl_A            3 TYIKLDKL--------GEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKS   74 (324)
T ss_dssp             SEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSC
T ss_pred             ceEEEEEE--------cCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCE
Confidence            46666777        99999999985432     111111111111111134579999999999999999999999999


Q ss_pred             EEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         92 ISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        92 ~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .+++|||+.+ +|.+++... ..+++..++.++
T Consensus        75 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~  106 (324)
T 3mtl_A           75 LTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFL  106 (324)
T ss_dssp             EEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHH
T ss_pred             EEEEeccccc-CHHHHHHhcCCCCCHHHHHHHH
Confidence            9999999995 999999876 457877766553

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.15  E-value=1.1e-12  Score=87.71  Aligned_cols=102  Identities=18%  Similarity=0.187  Sum_probs=71.6

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.+.|++.+.|        |+|+||.||++...  .+++........ .....+.+|+.+++.++|+||+.++++. ..
T Consensus        21 i~~~~y~~~~~l--------G~G~~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~   91 (289)
T 3og7_A           21 IPDGQITVGQRI--------GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TA   91 (289)
T ss_dssp             CCTTSCEEEEEE--------EECSSEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CS
T ss_pred             cCccceeeeeEe--------cCCCCeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cC
Confidence            445678888888        99999999985432  112221111111 2223567899999999999999999854 55


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ...+++|||+.+|+|.+++... ..+++..+..++
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~  126 (289)
T 3og7_A           92 PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIA  126 (289)
T ss_dssp             SSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHH
T ss_pred             CccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHH
Confidence            6689999999999999999654 567877665543

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.14  E-value=2.5e-12  Score=86.10  Aligned_cols=92  Identities=11%  Similarity=0.115  Sum_probs=65.6

Q ss_pred             CCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeE-EEEEEecCCC
Q psy14717         32 LPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDI-SICMEYMDGG  102 (125)
Q Consensus        32 lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~-~iv~e~~~~G  102 (125)
                      ||.|+||.||++.+.        .+++.............+.+|+.+++.++||||+++++++...+.. +++|||+.+|
T Consensus        29 lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~  108 (298)
T 3pls_A           29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHG  108 (298)
T ss_dssp             EEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTC
T ss_pred             eccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCC
Confidence            499999999985321        1111111111111223567899999999999999999999876654 9999999999


Q ss_pred             CHHHHHHHc-CCCCHHHHhhhh
Q psy14717        103 SLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +|.++++.. ..+++..+..++
T Consensus       109 ~L~~~~~~~~~~~~~~~~~~i~  130 (298)
T 3pls_A          109 DLLQFIRSPQRNPTVKDLISFG  130 (298)
T ss_dssp             BHHHHHHCTTCCCBHHHHHHHH
T ss_pred             CHHHHHhccccCCCHHHHHHHH
Confidence            999999874 567777665543

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.13  E-value=9.4e-12  Score=83.36  Aligned_cols=99  Identities=16%  Similarity=0.274  Sum_probs=70.3

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.|++++.|        |.|+||.||++...     .+++....... ......+.+|+.+++.++|+||+++++++..+
T Consensus         3 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   74 (299)
T 2r3i_A            3 ENFQKVEKI--------GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE   74 (299)
T ss_dssp             TTEEEEEEE--------EECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred             chhhhhhhh--------ccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecC
Confidence            456677777        99999999985321     11111111100 01112466899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      +..+++|||+.+ +|.+++...  ..+++..+..++
T Consensus        75 ~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~  109 (299)
T 2r3i_A           75 NKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYL  109 (299)
T ss_dssp             TEEEEEEECCSE-EHHHHHHHTTTTCCCHHHHHHHH
T ss_pred             CceEEEEEcccC-CHHHHHHhhhccCCCHHHHHHHH
Confidence            999999999995 999999876  457777665543

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.13  E-value=8.9e-13  Score=91.62  Aligned_cols=92  Identities=11%  Similarity=0.110  Sum_probs=65.3

Q ss_pred             CCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe-CCeEEEEEEecCCC
Q psy14717         32 LPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS-DQDISICMEYMDGG  102 (125)
Q Consensus        32 lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~-~~~~~iv~e~~~~G  102 (125)
                      ||+|+||.||++...        .+++.............+.+|+.+++.++||||+++++++.. .+..+++|||+.+|
T Consensus        97 LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g  176 (373)
T 3c1x_A           97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHG  176 (373)
T ss_dssp             EECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTC
T ss_pred             eeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCC
Confidence            599999999975421        112211111112233357789999999999999999998654 55789999999999


Q ss_pred             CHHHHHHHc-CCCCHHHHhhhh
Q psy14717        103 SLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +|.++++.. ..+++..+..++
T Consensus       177 ~L~~~l~~~~~~~~~~~~~~i~  198 (373)
T 3c1x_A          177 DLRNFIRNETHNPTVKDLIGFG  198 (373)
T ss_dssp             BHHHHHHCTTCCCBHHHHHHHH
T ss_pred             CHHHHHhhcccCCCHHHHHHHH
Confidence            999999875 346766655443

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.13  E-value=1.3e-11  Score=84.57  Aligned_cols=106  Identities=17%  Similarity=0.211  Sum_probs=75.1

Q ss_pred             CCCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeee
Q psy14717          9 SNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus         9 ~~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      ++.....+.|++++.|        |.|+||.||++...     .+++...... .......+.+|+.+++.++|+||+++
T Consensus        10 ~~~~~~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~   81 (351)
T 3mi9_A           10 CPFCDEVSKYEKLAKI--------GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNL   81 (351)
T ss_dssp             CTTSCBGGGEEEEEEC--------SSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccccccceeEEEEE--------ecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccH
Confidence            3444566789999999        99999999985431     1222211111 11112245689999999999999999


Q ss_pred             eeeEEeC--------CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         83 YGAFISD--------QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~--------~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ++++...        +.++++|||+.+ +|.+.+... ..+++..++.++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~  130 (351)
T 3mi9_A           82 IEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVM  130 (351)
T ss_dssp             EEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHH
T ss_pred             hheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHH
Confidence            9999873        468999999997 777777654 568888776654

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.12  E-value=1.2e-11  Score=85.03  Aligned_cols=97  Identities=18%  Similarity=0.157  Sum_probs=70.6

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcC-----CCceeeeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECN-----FAHIVGFYGA   85 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-----h~~iv~~~~~   85 (125)
                      +.|++++.|        |.|+||.||++...     .+++....  .........+|+.++..+.     |+||++++++
T Consensus        35 ~~y~~~~~l--------G~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~  104 (360)
T 3llt_A           35 NAFLVIRKM--------GDGTFGRVLLCQHIDNKKYYAVKVVRN--IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGK  104 (360)
T ss_dssp             TTEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEECS--CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEE
T ss_pred             CEEEEEEEE--------cccCCeEEEEEEECCCCeEEEEEEecc--chhhhhhhHHHHHHHHHhcccCCCCCCeecccce
Confidence            467777888        99999999985321     01111110  0111224557888888875     9999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHcC--CCCHHHHhhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~~  123 (125)
                      +...+..+++|||+ +|+|.+++....  .+++..++.++
T Consensus       105 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~  143 (360)
T 3llt_A          105 FMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYC  143 (360)
T ss_dssp             EEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHH
T ss_pred             eeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHH
Confidence            99999999999999 889999999863  48887776554

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.12  E-value=5.8e-12  Score=86.29  Aligned_cols=99  Identities=24%  Similarity=0.213  Sum_probs=72.7

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCC--CceeeeeeeEEe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERAD-LKTLSATTILKVLHECNF--AHIVGFYGAFIS   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h--~~iv~~~~~~~~   88 (125)
                      ..|++++.|        |.|+||.||++...    .+++........ .....+.+|+.++..+.|  +||+++++++..
T Consensus         9 ~~y~i~~~l--------G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~   80 (343)
T 3dbq_A            9 RIYSILKQI--------GSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT   80 (343)
T ss_dssp             CEEEEEEEE--------SCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             CEEEEEEEE--------ecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee
Confidence            457777888        99999999985331    111111111111 122356789999999876  999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+.++++|| +.+|+|.+++...+.+++..+..++
T Consensus        81 ~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~  114 (343)
T 3dbq_A           81 DQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYW  114 (343)
T ss_dssp             SSEEEEEEC-CCSEEHHHHHHHSCCCCHHHHHHHH
T ss_pred             CCEEEEEEe-CCCCCHHHHHHhcCCCCHHHHHHHH
Confidence            999999999 5677999999998889987766554

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.11  E-value=6.8e-13  Score=88.24  Aligned_cols=100  Identities=21%  Similarity=0.255  Sum_probs=71.6

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ...+.|++++.|        |.|+||.||++...   .+++.....   .....+.+|+.+++.++|+|++++++++...
T Consensus        18 ~~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   86 (278)
T 1byg_A           18 LNMKELKLLQTI--------GKGEFGDVMLGDYRGNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE   86 (278)
T ss_dssp             CCGGGEEEEEEE--------EECSSCEEEEEEETTEEEEEEECCCC---C--HHHHHTHHHHTTCCCTTBCCEEEEECCC
T ss_pred             CChhhceEEeEE--------ecCCCceEEEEEEcCCEEEEEEecch---hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC
Confidence            445688888888        99999999975321   111111111   1223567899999999999999999987654


Q ss_pred             -CeEEEEEEecCCCCHHHHHHHcC--CCCHHHHhhhh
Q psy14717         90 -QDISICMEYMDGGSLDLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus        90 -~~~~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~~  123 (125)
                       +.++++|||+++|+|.+++....  .+++..+..++
T Consensus        87 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~  123 (278)
T 1byg_A           87 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS  123 (278)
T ss_dssp             --CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHH
T ss_pred             CCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHH
Confidence             46999999999999999998753  27776665543

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.11  E-value=1.7e-12  Score=86.29  Aligned_cols=102  Identities=20%  Similarity=0.311  Sum_probs=72.8

Q ss_pred             CCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         11 VPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        11 ~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      ...+.+.|++++.|        |.|+||.||++...    .+++.....  ......+.+|+.+++.++|+||+++++++
T Consensus         8 ~~v~~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~   77 (279)
T 1qpc_A            8 WEVPRETLKLVERL--------GAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVV   77 (279)
T ss_dssp             TBCCGGGEEEEEEE--------EEETTEEEEEEEETTTEEEEEEEECTT--SSCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCHHhhhheeee--------cCCCCeEEEEEEEcCCcEEEEEEecCC--cccHHHHHHHHHHHHhCCCcCcceEEEEE
Confidence            33455688888888        99999999985321    111111111  11123567899999999999999999987


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHcC--CCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~~  123 (125)
                      . .+..+++|||+++|+|.+++....  .+++..+..++
T Consensus        78 ~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~  115 (279)
T 1qpc_A           78 T-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA  115 (279)
T ss_dssp             C-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHH
T ss_pred             c-CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHH
Confidence            6 445899999999999999997542  58877765543

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.11  E-value=5.9e-13  Score=90.60  Aligned_cols=100  Identities=17%  Similarity=0.242  Sum_probs=70.1

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      .+.|++++.|        |.|+||.||++.+.         .+.+.............+.+|+.++..++|+||++++++
T Consensus        12 ~~~y~~~~~l--------G~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~   83 (325)
T 3kex_A           12 ETELRKLKVL--------GSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGL   83 (325)
T ss_dssp             TTTEEEEEEE--------ECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEE
T ss_pred             HhHceeeeee--------eecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEE
Confidence            3567888888        99999999985421         011110000001111245679999999999999999998


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +. ....+++|||+.+|+|.+++... +.+++..+..++
T Consensus        84 ~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  121 (325)
T 3kex_A           84 CP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG  121 (325)
T ss_dssp             EC-BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHH
T ss_pred             Ec-CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHH
Confidence            85 45689999999999999999875 467776665543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.11  E-value=2.3e-13  Score=91.98  Aligned_cols=102  Identities=17%  Similarity=0.231  Sum_probs=72.5

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      +.+.|++.+.|        |.|+||.||++...  .+++....... ......+.+|+.+++.++|+||+++++++...+
T Consensus        31 ~~~~~~~~~~l--------g~G~~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  102 (319)
T 2y4i_B           31 PFEQLEIGELI--------GKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP  102 (319)
T ss_dssp             CCSCEECCCBC--------CCSSSSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred             CHHHeEEeeEe--------ccCCceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            34456666666        99999999975321  11121111111 111124557888999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHcC-CCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAG-KIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~-~l~~~~~~~~~  123 (125)
                      .++++|||+++|+|.+++...+ .+++..+..++
T Consensus       103 ~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~  136 (319)
T 2y4i_B          103 HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIA  136 (319)
T ss_dssp             CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHH
T ss_pred             ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHH
Confidence            9999999999999999998753 57777666554

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.10  E-value=6.5e-12  Score=84.79  Aligned_cols=102  Identities=13%  Similarity=0.170  Sum_probs=68.4

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      ..+.|++.+.|        |.|+||.||++...        .+++........ .....+.+|+.+++.++||||+++++
T Consensus        32 ~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~  103 (313)
T 3brb_A           32 DRNLLILGKIL--------GEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLG  103 (313)
T ss_dssp             CGGGEEEEEEE--------EC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCE
T ss_pred             CHHHeeeccce--------eecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeE
Confidence            33466666667        99999999975321        122221111111 12235678999999999999999999


Q ss_pred             eEEeCC-----eEEEEEEecCCCCHHHHHHHc------CCCCHHHHhhhh
Q psy14717         85 AFISDQ-----DISICMEYMDGGSLDLILKKA------GKIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~-----~~~iv~e~~~~GsL~~~l~~~------~~l~~~~~~~~~  123 (125)
                      ++....     ..+++|||+.+|+|.+++...      ..+++..+..++
T Consensus       104 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~  153 (313)
T 3brb_A          104 VCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM  153 (313)
T ss_dssp             EEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHH
T ss_pred             EEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHH
Confidence            998754     359999999999999999542      457877766554

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.10  E-value=1.6e-12  Score=88.93  Aligned_cols=101  Identities=19%  Similarity=0.227  Sum_probs=73.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---HHhhcCCCcccc----------------HHhhhHHHHHHHHHhcC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---RCLKKNPSERAD----------------LKTLSATTILKVLHECN   75 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---~~~~~~~~~~~~----------------~~~~~~~~e~~~~~~~~   75 (125)
                      .+.|++.+.|        |.|+||.||++...   .+++........                .....+.+|+.+++.++
T Consensus        30 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  101 (348)
T 2pml_X           30 INDYRIIRTL--------NQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIK  101 (348)
T ss_dssp             ETTEEEEEEE--------ECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCC
T ss_pred             cCceEEEEEE--------cCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCC
Confidence            3578888888        99999999985331   011110000000                00035678999999999


Q ss_pred             CCceeeeeeeEEeCCeEEEEEEecCCCCHHHH------HHH--cCCCCHHHHhhhh
Q psy14717         76 FAHIVGFYGAFISDQDISICMEYMDGGSLDLI------LKK--AGKIPEHILGTIT  123 (125)
Q Consensus        76 h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~------l~~--~~~l~~~~~~~~~  123 (125)
                      ||||+++++++...+.++++|||+++|+|.++      +..  ...+++..+..++
T Consensus       102 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~  157 (348)
T 2pml_X          102 NEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCII  157 (348)
T ss_dssp             CTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHH
T ss_pred             CCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHH
Confidence            99999999999999999999999999999998      655  4568887766554

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.09  E-value=6.9e-12  Score=86.87  Aligned_cols=98  Identities=20%  Similarity=0.345  Sum_probs=65.4

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ..|+.++.|        |.|+||.||++...     .++++..... .......+.+|+.+++.++|+||+++++++...
T Consensus        25 ~~y~~~~~l--------G~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~   96 (367)
T 1cm8_A           25 AVYRDLQPV--------GSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPD   96 (367)
T ss_dssp             SSEEEEEEC--------------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSC
T ss_pred             ceEEEeEEe--------eecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecC
Confidence            457777777        99999999986432     1222221111 111223567899999999999999999999875


Q ss_pred             C------eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 Q------DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~------~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .      .+|++|||+ +++|.++++. ..+++..++.++
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~  134 (367)
T 1cm8_A           97 ETLDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLV  134 (367)
T ss_dssp             SSTTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHH
T ss_pred             CccccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHH
Confidence            3      469999999 7799999988 578888776654

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.09  E-value=2.1e-11  Score=84.74  Aligned_cols=98  Identities=14%  Similarity=0.266  Sum_probs=63.1

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCc-cccHHhhhHHHHHHHHHhcC-CCceeeeeeeEEe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSE-RADLKTLSATTILKVLHECN-FAHIVGFYGAFIS   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~-h~~iv~~~~~~~~   88 (125)
                      ..|++++.|        |.|+||.||++.+.     .++++.... ..........+|+.+++.+. |+||+++++++..
T Consensus         9 ~~y~~~~~l--------G~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~   80 (388)
T 3oz6_A            9 RKYELVKKL--------GKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA   80 (388)
T ss_dssp             TTEEEEEC---------------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             CceEEEEEe--------eeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec
Confidence            356667777        99999999985432     122221111 11122335668999999986 9999999999986


Q ss_pred             CC--eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQ--DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~--~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+  .+|++||||.+ +|..+++. +.+++..++.++
T Consensus        81 ~~~~~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~i~  115 (388)
T 3oz6_A           81 DNDRDVYLVFDYMET-DLHAVIRA-NILEPVHKQYVV  115 (388)
T ss_dssp             TTSSCEEEEEECCSE-EHHHHHHH-TCCCHHHHHHHH
T ss_pred             CCCCEEEEEecccCc-CHHHHHHc-CCCCHHHHHHHH
Confidence            54  69999999995 99999987 578877766554

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.09  E-value=3.7e-12  Score=86.85  Aligned_cols=100  Identities=12%  Similarity=0.169  Sum_probs=72.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH---------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR---------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      .+.|++++.|        |.|+||.||++.+..         +.+.............+.+|+.+++.++||||++++++
T Consensus        14 ~~~y~~~~~l--------G~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~   85 (327)
T 3lzb_A           14 ETEFKKIKVL--------GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI   85 (327)
T ss_dssp             TTTEEEEEEE--------EECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEE
T ss_pred             HhHceEEEEe--------eeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEE
Confidence            3577888888        999999999854210         11111111111122356789999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +..+. .+++++++.+|+|.+++... ..+++..+..++
T Consensus        86 ~~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~  123 (327)
T 3lzb_A           86 CLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC  123 (327)
T ss_dssp             EESSS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHH
T ss_pred             EecCC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHH
Confidence            98765 78999999999999999875 568887776554

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.08  E-value=7.5e-12  Score=85.06  Aligned_cols=97  Identities=15%  Similarity=0.196  Sum_probs=67.4

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccc-cHHhhhHHHHHHHHHh--cCCCceeeeeeeEEeC---
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERA-DLKTLSATTILKVLHE--CNFAHIVGFYGAFISD---   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~-~~~~~~~~~e~~~~~~--~~h~~iv~~~~~~~~~---   89 (125)
                      +.|++++.|        |.|+||.||++....  .....+.. ........+|.+++..  ++|+||+++++.+...   
T Consensus        37 ~~y~~~~~l--------g~G~~g~V~~~~~~~--~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~  106 (337)
T 3mdy_A           37 KQIQMVKQI--------GKGRYGEVWMGKWRG--EKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGS  106 (337)
T ss_dssp             HHCEEEEEE--------EEETTEEEEEEEETT--EEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred             cceEEEeEe--------ecCCCeEEEEEEECC--ceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence            466777777        999999999853220  00001111 1111233456666654  4899999999999887   


Q ss_pred             -CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 -QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 -~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                       ..++++|||+.+|+|.++++. ..+++..+..++
T Consensus       107 ~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~  140 (337)
T 3mdy_A          107 WTQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLA  140 (337)
T ss_dssp             GCEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHH
T ss_pred             CCceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHH
Confidence             789999999999999999987 468887766554

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.07  E-value=5e-12  Score=86.66  Aligned_cols=99  Identities=18%  Similarity=0.176  Sum_probs=64.1

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH--------HhhcCCCccccH----------HhhhHHHHHHHHHhcCCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR--------CLKKNPSERADL----------KTLSATTILKVLHECNFA   77 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~--------~~~~~~~~~~~~----------~~~~~~~e~~~~~~~~h~   77 (125)
                      +.|++.+.|        |+|+||.||++....        +++.........          ....+.+|+..++.+.|+
T Consensus        37 ~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~  108 (345)
T 2v62_A           37 NQWVLGKKI--------GSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYL  108 (345)
T ss_dssp             CEEEEEEEC--------------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCC
T ss_pred             ceEEEEeeE--------eecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhcccccc
Confidence            356666677        999999999864310        111111110000          011245678888889999


Q ss_pred             ceeeeeeeEEe----CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         78 HIVGFYGAFIS----DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        78 ~iv~~~~~~~~----~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ||+++++++..    ...+|++|||+ +|+|.+++...+.+++..+..++
T Consensus       109 ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~  157 (345)
T 2v62_A          109 GIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLG  157 (345)
T ss_dssp             CCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHH
T ss_pred             CcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHH
Confidence            99999999988    67899999999 89999999887788888776654

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.07  E-value=1.3e-11  Score=86.17  Aligned_cols=98  Identities=23%  Similarity=0.208  Sum_probs=70.7

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccc-cHHhhhHHHHHHHHHhcC--CCceeeeeeeEEeC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERA-DLKTLSATTILKVLHECN--FAHIVGFYGAFISD   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~--h~~iv~~~~~~~~~   89 (125)
                      .|++++.|        |.|+||.||++...    .+++....... ......+.+|+.++..+.  |+||+++++++...
T Consensus        57 ~y~~~~~L--------G~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~  128 (390)
T 2zmd_A           57 IYSILKQI--------GSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD  128 (390)
T ss_dssp             EEEEEEEE--------ECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred             ceEEEEEE--------ccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC
Confidence            36667777        99999999985332    11111111111 112235678999999985  59999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.+|++|| +.+|+|.+++.....+++..+..++
T Consensus       129 ~~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~  161 (390)
T 2zmd_A          129 QYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYW  161 (390)
T ss_dssp             SEEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHH
T ss_pred             CEEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHH
Confidence            99999999 6778999999998888876665543

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.06  E-value=1.6e-12  Score=96.34  Aligned_cols=98  Identities=19%  Similarity=0.126  Sum_probs=68.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH------HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR------CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~------~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.|++.+.|        |.|+||.||++.+..      +++.............+.+|+.++..++||||+++++++...
T Consensus        80 ~~y~i~~~l--------g~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~  151 (681)
T 2pzi_A           80 GQYEVKGCI--------AHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHT  151 (681)
T ss_dssp             TTEEEEEEE--------EEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEE
T ss_pred             CceEEEEEE--------eeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeec
Confidence            467777777        999999999864321      122111111112223566899999999999999999999876


Q ss_pred             Ce-----EEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QD-----ISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~-----~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.     .||||||+++|+|.+++..  .+++..+..++
T Consensus       152 ~~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~  188 (681)
T 2pzi_A          152 DRHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYL  188 (681)
T ss_dssp             CTTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHH
T ss_pred             CCCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHH
Confidence            65     7999999999999998765  68887776554

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.06  E-value=1.6e-11  Score=83.08  Aligned_cols=99  Identities=15%  Similarity=0.108  Sum_probs=68.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCC-ccccHHhhhHHHHHHHHHh-cCCCceeeeeeeEEe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPS-ERADLKTLSATTILKVLHE-CNFAHIVGFYGAFIS   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~-~~~~~~~~~~~~e~~~~~~-~~h~~iv~~~~~~~~   88 (125)
                      +.|+.+++|        |.|+||.||++...     .+++.... ............|+..+.. ..|+||+++++++..
T Consensus        57 ~~y~~~~~L--------G~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~  128 (311)
T 3p1a_A           57 QSFQRLSRL--------GHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE  128 (311)
T ss_dssp             HHEEEEEEE--------EEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             hheeeehee--------ccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe
Confidence            456677777        99999999985432     12221111 1111222234456655555 499999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ...++++|||+ +|+|.+++... ..+++..+..++
T Consensus       129 ~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~  163 (311)
T 3p1a_A          129 GGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYL  163 (311)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHH
T ss_pred             CCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHH
Confidence            99999999999 55999988875 458888776554

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.05  E-value=1.8e-11  Score=82.43  Aligned_cols=97  Identities=18%  Similarity=0.183  Sum_probs=64.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE---
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI---   87 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~---   87 (125)
                      +.|++++.|        |.|+||.||++....     +++..... .......+.+|+.+++.++||||+++++++.   
T Consensus        11 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   81 (320)
T 2i6l_A           11 SRYMDLKPL--------GCGGNGLVFSAVDNDCDKRVAIKKIVLT-DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSG   81 (320)
T ss_dssp             TTEEEEEEC--------C-----CEEEEEETTTTEEEEEEEEECC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTS
T ss_pred             CceeEEEEe--------ccCCCeEEEEEEECCCCeEEEEEEEecC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccc
Confidence            467777778        999999999854321     11111111 1112235678999999999999999998873   


Q ss_pred             -----------eCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         88 -----------SDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        88 -----------~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                                 .....+++|||+. |+|.+++++ +.+++..++.++
T Consensus        82 ~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~-~~~~~~~~~~~~  126 (320)
T 2i6l_A           82 SQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ-GPLLEEHARLFM  126 (320)
T ss_dssp             CBCCC----CCSCSEEEEEEECCS-EEHHHHHTT-CCCCHHHHHHHH
T ss_pred             cccccccccccccCceeEEeeccC-CCHHHHhhc-CCccHHHHHHHH
Confidence                       3467999999999 599999976 578887766554

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.05  E-value=8.6e-12  Score=86.07  Aligned_cols=98  Identities=16%  Similarity=0.238  Sum_probs=72.1

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC-
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD-   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~-   89 (125)
                      ..|++++.|        |.|+||.||++...     .+++.............+.+|+.++..++||||+++++++... 
T Consensus        27 ~~y~~~~~l--------G~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   98 (364)
T 3qyz_A           27 PRYTNLSYI--------GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT   98 (364)
T ss_dssp             TTEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS
T ss_pred             ccEEEEEEe--------ecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCC
Confidence            478888888        99999999986432     1222211111112223567899999999999999999999765 


Q ss_pred             ----CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 ----QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ----~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                          ..++++|||+.+ +|.++++. +.+++..+..++
T Consensus        99 ~~~~~~~~iv~e~~~~-~L~~~l~~-~~~~~~~~~~i~  134 (364)
T 3qyz_A           99 IEQMKDVYIVQDLMET-DLYKLLKT-QHLSNDHICYFL  134 (364)
T ss_dssp             TTTCCCEEEEEECCSE-EHHHHHHH-CCCCHHHHHHHH
T ss_pred             ccccceEEEEEcccCc-CHHHHHHh-CCCCHHHHHHHH
Confidence                368999999996 99999987 578888776654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.05  E-value=4e-11  Score=80.81  Aligned_cols=100  Identities=15%  Similarity=0.243  Sum_probs=67.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc----ccHHhhhHHHHHHHHHhc---CCCceeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER----ADLKTLSATTILKVLHEC---NFAHIVGF   82 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~----~~~~~~~~~~e~~~~~~~---~h~~iv~~   82 (125)
                      .+.|++++.|        |.|+||.||++.+.     .+++......    .........+|+.+++.+   .||||+++
T Consensus         8 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~   79 (308)
T 3g33_A            8 TSRYEPVAEI--------GVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRL   79 (308)
T ss_dssp             --CCEEEEEE--------CCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCE
T ss_pred             ccceEEEEEE--------ecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEe
Confidence            3467888888        99999999985431     1111111000    000012345677777665   59999999


Q ss_pred             eeeEEeCC-----eEEEEEEecCCCCHHHHHHHcCC--CCHHHHhhhh
Q psy14717         83 YGAFISDQ-----DISICMEYMDGGSLDLILKKAGK--IPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~-----~~~iv~e~~~~GsL~~~l~~~~~--l~~~~~~~~~  123 (125)
                      ++++....     .++++|||+.+ +|.+++.....  +++..++.++
T Consensus        80 ~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~i~  126 (308)
T 3g33_A           80 MDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLM  126 (308)
T ss_dssp             EEEEEECCSSSEEEEEEEEECCCC-BHHHHHHTCCTTCSCHHHHHHHH
T ss_pred             eeeeeccCCCCceeEEEEehhhhc-CHHHHHhhccCCCCCHHHHHHHH
Confidence            99998765     58999999985 99999988643  8888776654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.05  E-value=1e-11  Score=86.31  Aligned_cols=94  Identities=19%  Similarity=0.307  Sum_probs=66.3

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHH-----hhhHHHHHHHHHhcCCCceeeeeeeEEeC-
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLK-----TLSATTILKVLHECNFAHIVGFYGAFISD-   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~e~~~~~~~~h~~iv~~~~~~~~~-   89 (125)
                      ..|++.+.|        |.|+||.||++..     ....+..+.+     .....+|+.+++.++|+||+++++++... 
T Consensus         7 ~~y~~~~~l--------G~G~fg~V~~a~~-----~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~   73 (383)
T 3eb0_A            7 KKYSLGKTL--------GTGSFGIVCEVFD-----IESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTG   73 (383)
T ss_dssp             TTEEEEEEE--------ECC-CEEEEEEEE-----TTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC-
T ss_pred             ceEEEEEEE--------EeccCEEEEEEEE-----CCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecC
Confidence            467777888        9999999998532     2222222221     11234799999999999999999998543 


Q ss_pred             -------------------------------------CeEEEEEEecCCCCHHHHHHH----cCCCCHHHHhhhh
Q psy14717         90 -------------------------------------QDISICMEYMDGGSLDLILKK----AGKIPEHILGTIT  123 (125)
Q Consensus        90 -------------------------------------~~~~iv~e~~~~GsL~~~l~~----~~~l~~~~~~~~~  123 (125)
                                                           ..++++|||+++ +|.+.+..    ...+++..++.++
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~  147 (383)
T 3eb0_A           74 DEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYI  147 (383)
T ss_dssp             ------------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHH
Confidence                                                 348999999996 88777764    3678887776654

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.05  E-value=1.1e-11  Score=83.05  Aligned_cols=99  Identities=14%  Similarity=0.131  Sum_probs=68.1

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCcccc-HHhhhHHHHHHHHHh--cCCCceeeeeeeEEeC-
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERAD-LKTLSATTILKVLHE--CNFAHIVGFYGAFISD-   89 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~~~--~~h~~iv~~~~~~~~~-   89 (125)
                      ..+.|++++.|        |.|+||.||++....  +....+... .......+|.+++..  ++||||+++++.+... 
T Consensus         6 ~~~~y~~~~~l--------g~G~~g~V~~~~~~~--~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~   75 (301)
T 3q4u_A            6 VARDITLLECV--------GKGRYGEVWRGSWQG--ENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR   75 (301)
T ss_dssp             CGGGCEEEEEE--------EECSSEEEEEEEETT--EEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE
T ss_pred             ccCcEEEEEee--------ccCCCcEEEEEEECC--EEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeecccc
Confidence            34577888888        999999999853310  000011111 112234456776666  7999999999987653 


Q ss_pred             ---CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 ---QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ---~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                         ..+|++|||+++|+|.++++. ..+++..+..++
T Consensus        76 ~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~  111 (301)
T 3q4u_A           76 HSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIV  111 (301)
T ss_dssp             TTEEEEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHH
T ss_pred             CCCceeEEehhhccCCCHHHHHhh-cccCHHHHHHHH
Confidence               458999999999999999976 578887766554

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.04  E-value=1.2e-11  Score=82.47  Aligned_cols=100  Identities=18%  Similarity=0.180  Sum_probs=68.0

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCcc--ccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSER--ADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      ...|++++.|        |.|+||.||++.+.        .+++......  .......+.+|+.+++.++|+||+++++
T Consensus        17 ~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~   88 (291)
T 1u46_A           17 EKDLRLLEKL--------GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYG   88 (291)
T ss_dssp             GGGEEEEEEC--------C----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             hhHeeeeeee--------cCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEE
Confidence            4578888888        99999999985421        1111111110  1112235678999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ++..+. .+++|||+++|+|.+++... ..+++..+..++
T Consensus        89 ~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~  127 (291)
T 1u46_A           89 VVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA  127 (291)
T ss_dssp             EECSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHH
T ss_pred             EEccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHH
Confidence            997765 89999999999999999875 568887766554

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.04  E-value=7.4e-12  Score=84.46  Aligned_cols=100  Identities=14%  Similarity=0.168  Sum_probs=67.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-----HHhhhHHHHHHHHHhc----CCCceee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-----LKTLSATTILKVLHEC----NFAHIVG   81 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-----~~~~~~~~e~~~~~~~----~h~~iv~   81 (125)
                      +.|++.+.|        |.|+||.||++...     .+++........     .....+.+|+.++..+    .|+||++
T Consensus        31 ~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~  102 (312)
T 2iwi_A           31 AEYRLGPLL--------GKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIR  102 (312)
T ss_dssp             --CEEEEEE--------EEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCC
T ss_pred             hceEEeeEE--------EcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeee
Confidence            467777777        99999999986431     122221111100     1122345788888887    8999999


Q ss_pred             eeeeEEeCCeEEEEEEe-cCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         82 FYGAFISDQDISICMEY-MDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~-~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++++...+..++++|+ +.+|+|.+++...+.+++..+..++
T Consensus       103 ~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~  145 (312)
T 2iwi_A          103 LLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFF  145 (312)
T ss_dssp             EEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHH
T ss_pred             EEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence            99999999999999999 7899999999988889988776654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.03  E-value=3.5e-11  Score=81.68  Aligned_cols=92  Identities=10%  Similarity=0.188  Sum_probs=67.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCcccc------HHhhhHHHHHHHHHhcC-CCceeeeeeeEEe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERAD------LKTLSATTILKVLHECN-FAHIVGFYGAFIS   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~------~~~~~~~~e~~~~~~~~-h~~iv~~~~~~~~   88 (125)
                      +.|++++.|        |.|+||.||++...     ...+..+      .....+.+|+.+++.+. |+||+++++++..
T Consensus        36 ~~y~~~~~l--------g~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~  102 (330)
T 3nsz_A           36 DDYQLVRKL--------GRGKYSEVFEAINI-----TNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKD  102 (330)
T ss_dssp             GGEEEEEEE--------EECSSEEEEEEEET-----TTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEEC
T ss_pred             CceEEEEEe--------cccCCeEEEEEEEC-----CCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeecc
Confidence            456666677        99999999985321     1111111      11235678999999986 9999999999988


Q ss_pred             --CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 --DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 --~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                        ....+++|||+.+|+|.++++.   +++..++.++
T Consensus       103 ~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~  136 (330)
T 3nsz_A          103 PVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYM  136 (330)
T ss_dssp             TTTCCEEEEEECCCCCCHHHHGGG---CCHHHHHHHH
T ss_pred             CCCCceEEEEeccCchhHHHHHHh---CCHHHHHHHH
Confidence              5679999999999999998743   6776665543

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.03  E-value=5.6e-11  Score=79.47  Aligned_cols=96  Identities=14%  Similarity=0.102  Sum_probs=71.7

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~   89 (125)
                      +.|++.+.|        |.|+||.||++...     .+++....   ......+.+|+.++..+ +|++++.+++++...
T Consensus        10 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~   78 (298)
T 1csn_A           10 VHYKVGRRI--------GEGSFGVIFEGTNLLNNQQVAIKFEPR---RSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEG   78 (298)
T ss_dssp             TTEEEEEEE--------EECSSCEEEEEEETTTTEEEEEEEEEC---CTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEET
T ss_pred             cceEEEEEE--------eecCCEEEEEEEECCCCcEEEEEEecc---CCccHHHHHHHHHHHHHhcCCCCCeEEeecCCC
Confidence            467788888        99999999985421     01111100   11122466899999998 899999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ...+++|||+ +|+|.+++... ..+++..+..++
T Consensus        79 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~  112 (298)
T 1csn_A           79 LHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAA  112 (298)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHH
T ss_pred             ceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHH
Confidence            9999999999 88999999975 358887776654

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.02  E-value=1.2e-12  Score=89.37  Aligned_cols=100  Identities=16%  Similarity=0.176  Sum_probs=65.3

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---HHhhcCCCcc-------ccHHhhhHHHHHHHHHhcC---------
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---RCLKKNPSER-------ADLKTLSATTILKVLHECN---------   75 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---~~~~~~~~~~-------~~~~~~~~~~e~~~~~~~~---------   75 (125)
                      .+.|++++.|        |+|+||.||++...   .+++......       .......+.+|+.+++.++         
T Consensus        19 ~~~y~~~~~l--------G~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~   90 (336)
T 2vuw_A           19 TEKLQRCEKI--------GEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNR   90 (336)
T ss_dssp             HHHHHTCEEE--------EEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSB
T ss_pred             cccchheeee--------cccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhcccccc
Confidence            4678888888        99999999986432   1122111110       0001134668888888775         


Q ss_pred             CCceeeeeee-----------------EEe-------------CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         76 FAHIVGFYGA-----------------FIS-------------DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        76 h~~iv~~~~~-----------------~~~-------------~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      |+|++.+.+.                 +..             ...+|||||||++|++.+.+.+ +.+++..++.++
T Consensus        91 h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~~~i~  167 (336)
T 2vuw_A           91 TEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATAKSIL  167 (336)
T ss_dssp             CCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHHHHHH
T ss_pred             CCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHHHHHH
Confidence            6666655554                 333             6789999999999977666654 568888877664

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.02  E-value=9.9e-12  Score=85.03  Aligned_cols=96  Identities=20%  Similarity=0.271  Sum_probs=65.6

Q ss_pred             chHHHHHH-HhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHh----hhHHHHHH-HHHhcCCCceeeeeeeEEe
Q psy14717         15 MAIFELLD-YIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKT----LSATTILK-VLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~-~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~----~~~~~e~~-~~~~~~h~~iv~~~~~~~~   88 (125)
                      .+.|+++. .|        |.|+||.||++..     ....+..+.+.    ....+|+. .+..+.|+|++++++++..
T Consensus        27 ~~~y~i~~~~l--------G~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~   93 (336)
T 3fhr_A           27 TDDYQLSKQVL--------GLGVNGKVLECFH-----RRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYEN   93 (336)
T ss_dssp             GGTEEEEEEEE--------EEETTEEEEEEEE-----TTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred             cceeEecceee--------eeCCCeEEEEEEE-----CCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhh
Confidence            35677755 47        9999999998532     22222222111    12223433 3455799999999999976


Q ss_pred             ----CCeEEEEEEecCCCCHHHHHHHcC--CCCHHHHhhhh
Q psy14717         89 ----DQDISICMEYMDGGSLDLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus        89 ----~~~~~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~~  123 (125)
                          ...++++||||.+|+|.+++....  .+++..+..++
T Consensus        94 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~  134 (336)
T 3fhr_A           94 MHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIM  134 (336)
T ss_dssp             EETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHH
T ss_pred             ccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHH
Confidence                445999999999999999998763  58888776654

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.01  E-value=1.1e-11  Score=85.54  Aligned_cols=57  Identities=11%  Similarity=0.206  Sum_probs=46.9

Q ss_pred             HHHHHHHhcCCCceeeeeeeEEeC----CeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         66 TILKVLHECNFAHIVGFYGAFISD----QDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        66 ~e~~~~~~~~h~~iv~~~~~~~~~----~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +|+..+..+.|+||+++++++...    ...+|+|||| +|+|.+++... +.+++..+..++
T Consensus        97 ~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~  158 (364)
T 3op5_A           97 QKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLS  158 (364)
T ss_dssp             HHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHH
T ss_pred             HHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHH
Confidence            455566677899999999998775    4589999999 99999999886 578988877664

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.01  E-value=1.7e-11  Score=84.03  Aligned_cols=101  Identities=21%  Similarity=0.347  Sum_probs=68.4

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccH----HhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADL----KTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~----~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      ....|++++.|        |.|+||.||++...     .+++.........    ....+.+|+.+++.++|+||+++++
T Consensus         8 ~~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   79 (346)
T 1ua2_A            8 RAKRYEKLDFL--------GEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLD   79 (346)
T ss_dssp             -----CEEEEE--------EEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             HhcccEEEeEE--------eecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEE
Confidence            34578888888        99999999985431     1112111110000    0124568999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ++......+++|||+.+ +|..++... ..+++..+..++
T Consensus        80 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~  118 (346)
T 1ua2_A           80 AFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYM  118 (346)
T ss_dssp             EECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHH
T ss_pred             EEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHH
Confidence            99999999999999997 899988765 357776665543

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.00  E-value=1.6e-11  Score=83.37  Aligned_cols=101  Identities=30%  Similarity=0.381  Sum_probs=68.5

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHH-HHHhcCCCceeeeeeeEE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILK-VLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~-~~~~~~h~~iv~~~~~~~   87 (125)
                      ..+.|+.++.|        |.|+||.||++...     .+++...............+|+. +++.++||||+++++++.
T Consensus        20 ~~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~   91 (327)
T 3aln_A           20 TAEDLKDLGEI--------GRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF   91 (327)
T ss_dssp             CSCSEEC-CEE--------EECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE
T ss_pred             CHHHhhehhee--------ccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE
Confidence            34577777888        99999999985432     11111111111112223445665 566689999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHH-----cCCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKK-----AGKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~-----~~~l~~~~~~~~~  123 (125)
                      .++..+++|||+.+ +|.+++..     ...+++..+..++
T Consensus        92 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~  131 (327)
T 3aln_A           92 REGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKIT  131 (327)
T ss_dssp             CSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHH
T ss_pred             eCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHH
Confidence            99999999999997 88888874     3567877766554

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.00  E-value=2.2e-10  Score=80.06  Aligned_cols=91  Identities=18%  Similarity=0.311  Sum_probs=58.9

Q ss_pred             CCCCCCCCchhHHHHHHH-------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe--CCeEEEEEEec
Q psy14717         29 PPKLPAGIFTDSFRDFVD-------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS--DQDISICMEYM   99 (125)
Q Consensus        29 ~~~lg~g~fg~v~~~~~~-------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~--~~~~~iv~e~~   99 (125)
                      ...||.|+||.||++...       .+++.....   .....+.+|+.+++.++||||+++++++..  ...+|++|||+
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~  102 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT---GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA  102 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSS---SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECC
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC---CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCC
Confidence            345799999999985321       111111111   011246689999999999999999999965  66899999999


Q ss_pred             CCCCHHHHHHHcC---------CCCHHHHhhhh
Q psy14717        100 DGGSLDLILKKAG---------KIPEHILGTIT  123 (125)
Q Consensus       100 ~~GsL~~~l~~~~---------~l~~~~~~~~~  123 (125)
                      .+ +|.+++....         .+++..++.++
T Consensus       103 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~  134 (405)
T 3rgf_A          103 EH-DLWHIIKFHRASKANKKPVQLPRGMVKSLL  134 (405)
T ss_dssp             SE-EHHHHHHHHHHHC-------CCHHHHHHHH
T ss_pred             CC-CHHHHHHHhccccccccccCCCHHHHHHHH
Confidence            86 8888886431         37777766554

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.00  E-value=7.5e-11  Score=78.57  Aligned_cols=101  Identities=26%  Similarity=0.338  Sum_probs=68.5

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhH-HHHHHHHHhcCCCceeeeeeeEE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSA-TTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~-~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      ..+.|++++.|        |.|+||.||++...     .+++.............. ..+...++.+.||||+++++++.
T Consensus         5 ~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~   76 (290)
T 3fme_A            5 KADDLEPIMEL--------GRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF   76 (290)
T ss_dssp             CGGGEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             cHHhhhhHHhc--------CCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee
Confidence            45678888888        99999999985431     111111111111111222 33444566789999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHH----cCCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKK----AGKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~----~~~l~~~~~~~~~  123 (125)
                      .++..+++|||+++ +|.+++..    ...+++..+..++
T Consensus        77 ~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~  115 (290)
T 3fme_A           77 REGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIA  115 (290)
T ss_dssp             CSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred             ccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHH
Confidence            99999999999986 98887765    3578888776654

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.00  E-value=1.9e-11  Score=84.00  Aligned_cols=99  Identities=12%  Similarity=0.069  Sum_probs=68.7

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhh---cCCCccccHH----hhhHHHHHHHHHhcCCCceee-------
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLK---KNPSERADLK----TLSATTILKVLHECNFAHIVG-------   81 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~---~~~~~~~~~~----~~~~~~e~~~~~~~~h~~iv~-------   81 (125)
                      +.|++.+.|        |.|+||.||++.......   .......+.+    ...+.+|+.+++.+.|+|+++       
T Consensus        42 ~~y~~~~~l--------g~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~  113 (352)
T 2jii_A           42 RQWKLKSFQ--------TRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYS  113 (352)
T ss_dssp             CEEEEEEEE--------EEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred             CeEEEEEEe--------cCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhcc
Confidence            467777777        999999999853210000   0001111111    124678999999999999987       


Q ss_pred             --------eeeeEEe-CCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         82 --------FYGAFIS-DQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        82 --------~~~~~~~-~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                              +++++.. ....+++|||+ +|+|.+++...  ..+++..+..++
T Consensus       114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~  165 (352)
T 2jii_A          114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVA  165 (352)
T ss_dssp             CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHH
T ss_pred             CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHH
Confidence                    5566665 67899999999 89999999986  678888776654

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=98.99  E-value=9.4e-10  Score=80.31  Aligned_cols=57  Identities=16%  Similarity=0.057  Sum_probs=52.8

Q ss_pred             hHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHH
Q psy14717         63 SATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHIL  119 (125)
Q Consensus        63 ~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~  119 (125)
                      .+.+|+++|+++ .|+||+++++++.+++.+||||||++||+|.++|++.+++++..+
T Consensus       287 ~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~~I  344 (569)
T 4azs_A          287 ELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDREKI  344 (569)
T ss_dssp             HHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHHHH
T ss_pred             HHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHHHH
Confidence            578999999998 799999999999999999999999999999999999888887654

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=98.99  E-value=4.9e-11  Score=80.04  Aligned_cols=99  Identities=11%  Similarity=0.177  Sum_probs=66.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCcc---ccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSER---ADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~---~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      +.|++.+.|        |.|+||.||++....     +++......   .......+.+|+.+++.++|+||+++++++.
T Consensus         5 ~~y~i~~~l--------g~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   76 (305)
T 2wtk_C            5 GKYLMGDLL--------GEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLY   76 (305)
T ss_dssp             CCBCCCCEE--------EECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred             cceeEeeEE--------ecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEE
Confidence            456666777        999999999853210     111100000   0011235678999999999999999999985


Q ss_pred             e--CCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         88 S--DQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        88 ~--~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      .  ....+++|||+.+| |.+++...  ..+++..+..++
T Consensus        77 ~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~  115 (305)
T 2wtk_C           77 NEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYF  115 (305)
T ss_dssp             CC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHH
T ss_pred             cCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHH
Confidence            3  45799999999996 77877763  467877665543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=98.99  E-value=6.6e-11  Score=80.35  Aligned_cols=102  Identities=11%  Similarity=0.177  Sum_probs=73.1

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-----HHhhhHHHHHHHHHhcC--CCceee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-----LKTLSATTILKVLHECN--FAHIVG   81 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-----~~~~~~~~e~~~~~~~~--h~~iv~   81 (125)
                      ..+.|++.+.|        |.|+||.||++...     .+++........     .....+.+|+.+++.+.  |+|+++
T Consensus        41 ~~~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~  112 (320)
T 3a99_A           41 LESQYQVGPLL--------GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIR  112 (320)
T ss_dssp             CTTTEEEEEEC--------SSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCC
T ss_pred             ccCceEEEEEE--------eeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceE
Confidence            34567777777        99999999985321     111111100000     01124557999999885  699999


Q ss_pred             eeeeEEeCCeEEEEEEecCC-CCHHHHHHHcCCCCHHHHhhhh
Q psy14717         82 FYGAFISDQDISICMEYMDG-GSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~-GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++++..++..+++||++.+ ++|.+++...+.+++..+..++
T Consensus       113 ~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~  155 (320)
T 3a99_A          113 LLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF  155 (320)
T ss_dssp             EEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHH
T ss_pred             EEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHH
Confidence            99999999999999999986 8999999988889988776554

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=98.98  E-value=2.2e-11  Score=83.37  Aligned_cols=99  Identities=15%  Similarity=0.211  Sum_probs=71.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|++.+.|        |.|+||.||++...     .+++.............+.+|+.+++.++|+||+++++++...
T Consensus        10 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   81 (353)
T 2b9h_A           10 SSDFQLKSLL--------GEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPD   81 (353)
T ss_dssp             CTTEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS
T ss_pred             ccceEEeeEE--------cCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeeccc
Confidence            3577888888        99999999985432     1122111111112223566899999999999999999987664


Q ss_pred             -----CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 -----QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 -----~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                           ...+++|||+.+ +|.+++.. +.+++..+..++
T Consensus        82 ~~~~~~~~~lv~e~~~~-~L~~~~~~-~~~~~~~~~~~~  118 (353)
T 2b9h_A           82 SFENFNEVYIIQELMQT-DLHRVIST-QMLSDDHIQYFI  118 (353)
T ss_dssp             CSTTCCCEEEEECCCSE-EHHHHHHH-CCCCHHHHHHHH
T ss_pred             ccCccceEEEEEeccCc-cHHHHHhh-cCCCHHHHHHHH
Confidence                 679999999985 99999988 578887776554

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=98.97  E-value=6.4e-11  Score=80.61  Aligned_cols=91  Identities=13%  Similarity=0.132  Sum_probs=65.6

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      |.|+||.||++...     .+++....... ......+.+|+.++..+ +||||+++++++.....++++|||+.+|+|.
T Consensus        38 G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  117 (327)
T 3lm5_A           38 GRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIF  117 (327)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGG
T ss_pred             CCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHH
Confidence            99999999985321     01111111110 11123567899999987 5799999999999999999999999999999


Q ss_pred             HHHHHc--CCCCHHHHhhhh
Q psy14717        106 LILKKA--GKIPEHILGTIT  123 (125)
Q Consensus       106 ~~l~~~--~~l~~~~~~~~~  123 (125)
                      +++...  ..+++..+..++
T Consensus       118 ~~~~~~~~~~~~~~~~~~i~  137 (327)
T 3lm5_A          118 SLCLPELAEMVSENDVIRLI  137 (327)
T ss_dssp             GGGSSCC-CCCCHHHHHHHH
T ss_pred             HHHHHhcccCCCHHHHHHHH
Confidence            998653  568887776654

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=98.96  E-value=7.6e-12  Score=85.12  Aligned_cols=101  Identities=14%  Similarity=0.116  Sum_probs=64.9

Q ss_pred             CCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCcccc-HHhhhHHHHHHHH--HhcCCCceeeeeeeEE
Q psy14717         11 VPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERAD-LKTLSATTILKVL--HECNFAHIVGFYGAFI   87 (125)
Q Consensus        11 ~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~--~~~~h~~iv~~~~~~~   87 (125)
                      .....+.|++++.|        |.|+||.||++....  +....+... ........|.++.  ..+.|+||+++++.+.
T Consensus         8 ~~~~~~~y~~~~~l--------g~G~~g~Vy~~~~~~--~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~   77 (336)
T 3g2f_A            8 PSLDLDNLKLLELI--------GRGRYGAVYKGSLDE--RPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDE   77 (336)
T ss_dssp             -CCCTTSEEEEEEE--------EECSSEEEEEEEETT--EEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEE
T ss_pred             CCcChHHhheeeec--------ccCCCeEEEEEEECC--eEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheeccc
Confidence            34556789999999        999999999853210  000011111 1111233344443  3589999999997654


Q ss_pred             e-----CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhh
Q psy14717         88 S-----DQDISICMEYMDGGSLDLILKKAGKIPEHILGTI  122 (125)
Q Consensus        88 ~-----~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~  122 (125)
                      .     ...++++||||++|+|.++++.. ..++..+..+
T Consensus        78 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i  116 (336)
T 3g2f_A           78 RVTADGRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRL  116 (336)
T ss_dssp             EECTTSCEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHH
T ss_pred             ccccCCCceEEEEEecCCCCcHHHHHhhc-ccchhHHHHH
Confidence            3     23579999999999999999885 4576655544

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=98.94  E-value=1e-10  Score=80.93  Aligned_cols=98  Identities=18%  Similarity=0.258  Sum_probs=69.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      ...|++++.|        |.|+||.||++...     .+++...... .......+.+|+.+++.++||||+++++++..
T Consensus        24 ~~~y~~~~~l--------G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   95 (371)
T 2xrw_A           24 LKRYQNLKPI--------GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP   95 (371)
T ss_dssp             ETTEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             hhheeEeeee--------EecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecc
Confidence            3567777888        99999999985321     1122111111 11122356689999999999999999999977


Q ss_pred             CC------eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQ------DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~------~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..      .+|++|||+.+ +|.+++..  .+++..+..++
T Consensus        96 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~i~  133 (371)
T 2xrw_A           96 QKSLEEFQDVYIVMELMDA-NLCQVIQM--ELDHERMSYLL  133 (371)
T ss_dssp             CCSTTTCCEEEEEEECCSE-EHHHHHHS--CCCHHHHHHHH
T ss_pred             ccccccccceEEEEEcCCC-CHHHHHhh--ccCHHHHHHHH
Confidence            64      78999999986 88888864  57877665543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=98.94  E-value=3.1e-11  Score=83.66  Aligned_cols=98  Identities=16%  Similarity=0.292  Sum_probs=62.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.|++++.|        |.|+||.||++...     .++++..... .......+.+|+.+++.++|+||+++++++...
T Consensus        29 ~~y~~~~~l--------G~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~  100 (367)
T 2fst_X           29 ERYQNLSPV--------GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA  100 (367)
T ss_dssp             TTEEEEEEC--------C----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             CceEEeeEE--------eecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecC
Confidence            456666777        99999999986431     1222222111 112233567899999999999999999998754


Q ss_pred             ------CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 ------QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ------~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                            ..+|+++|++ +++|.++++. +.+++..++.++
T Consensus       101 ~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~  138 (367)
T 2fst_X          101 RSLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLI  138 (367)
T ss_dssp             SSGGGCCCCEEEEECC-CEECC------CCCCHHHHHHHH
T ss_pred             CccccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHH
Confidence                  5689999999 5699999887 578888776654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=98.94  E-value=3.7e-11  Score=85.68  Aligned_cols=97  Identities=18%  Similarity=0.230  Sum_probs=66.8

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.|++++.|        |.|+||.||++.+.     .++++..... .......+.+|+.+++.++||||+++++++...
T Consensus        62 ~~y~~~~~l--------G~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~  133 (464)
T 3ttj_A           62 KRYQNLKPI--------GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ  133 (464)
T ss_dssp             TTEEEEEEE--------EECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             CCeEEEEEe--------ecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccC
Confidence            456667777        99999999985432     1122211111 111223567899999999999999999999765


Q ss_pred             ------CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 ------QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ------~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                            ..+|+|||||.+ +|.+.+..  .+++..++.++
T Consensus       134 ~~~~~~~~~~lv~E~~~~-~l~~~~~~--~l~~~~~~~~~  170 (464)
T 3ttj_A          134 KTLEEFQDVYLVMELMDA-NLCQVIQM--ELDHERMSYLL  170 (464)
T ss_dssp             CSTTTCCEEEEEEECCSE-EHHHHHTS--CCCHHHHHHHH
T ss_pred             CccccCCeEEEEEeCCCC-CHHHHHhh--cCCHHHHHHHH
Confidence                  357999999998 56666644  48887766554

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=98.94  E-value=1.9e-10  Score=78.94  Aligned_cols=97  Identities=15%  Similarity=0.171  Sum_probs=52.4

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      +.|++.+.|        |.|+||.||++...     .+++.....  ........+++..+..++||||+++++++....
T Consensus        23 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~   92 (360)
T 3e3p_A           23 DRFQVERMA--------GQGTFGTVQLGKEKSTGMSVAIKKVIQD--PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLG   92 (360)
T ss_dssp             TTEEEC------------------CEEEEETTTCCEEEEEEEECC--TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEEC
T ss_pred             cceEEEEEE--------ecCCCeEEEEEEECCCCCEEEEEEEecC--ccccHHHHHHHHHHHhcCCCCcccHHHhhhccc
Confidence            345666666        99999999985331     111111000  001113445677778889999999999997644


Q ss_pred             e-------EEEEEEecCCCCHHHHHH----HcCCCCHHHHhhhh
Q psy14717         91 D-------ISICMEYMDGGSLDLILK----KAGKIPEHILGTIT  123 (125)
Q Consensus        91 ~-------~~iv~e~~~~GsL~~~l~----~~~~l~~~~~~~~~  123 (125)
                      .       ++++|||+.+ +|...+.    ....+++..+..++
T Consensus        93 ~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~  135 (360)
T 3e3p_A           93 ERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFL  135 (360)
T ss_dssp             SSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHH
T ss_pred             cccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHH
Confidence            3       8999999998 5554443    33567776665443

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=98.93  E-value=6.3e-11  Score=80.00  Aligned_cols=99  Identities=23%  Similarity=0.204  Sum_probs=71.6

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccc-cHHhhhHHHHHHHHHhcC--CCceeeeeeeEEe
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERA-DLKTLSATTILKVLHECN--FAHIVGFYGAFIS   88 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~--h~~iv~~~~~~~~   88 (125)
                      ..|++++.|        |.|+||.||++...    .+++....... ......+.+|+.++..+.  |+||+++++++..
T Consensus        28 ~~y~~~~~l--------g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~   99 (313)
T 3cek_A           28 RIYSILKQI--------GSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT   99 (313)
T ss_dssp             EEEEEEEEE--------ECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred             ceEEEEEEe--------cCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence            356777777        99999999985331    11111111111 112235678999999986  5999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+.++++|| +.+|+|.+++...+.+++..+..++
T Consensus       100 ~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~  133 (313)
T 3cek_A          100 DQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYW  133 (313)
T ss_dssp             SSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHH
T ss_pred             CCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHH
Confidence            999999999 6677999999988888887766543

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=98.92  E-value=8e-11  Score=79.81  Aligned_cols=97  Identities=19%  Similarity=0.168  Sum_probs=67.3

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcC-CCceeeeeeeEEe--
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECN-FAHIVGFYGAFIS--   88 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-h~~iv~~~~~~~~--   88 (125)
                      .|++.+.|        |.|+||.||++.+.     .+++.... ........+.+|+.++..+. |+||+++++++..  
T Consensus        29 ~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~   99 (337)
T 3ll6_A           29 RLRVRRVL--------AEGGFAFVYEAQDVGSGREYALKRLLS-NEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGK   99 (337)
T ss_dssp             EEEEEEEE--------ECCSSEEEEEEEETTTCCEEEEEEEEE-SSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECT
T ss_pred             eEEEEEEE--------ccCCceEEEEEEECCCCcEEEEEEecC-CchHHHHHHHHHHHHHHHhccCCChhhccccccccc
Confidence            56777778        99999999985431     11111100 01112235678999999985 9999999999853  


Q ss_pred             ------CCeEEEEEEecCCCCHHHHHHH---cCCCCHHHHhhhh
Q psy14717         89 ------DQDISICMEYMDGGSLDLILKK---AGKIPEHILGTIT  123 (125)
Q Consensus        89 ------~~~~~iv~e~~~~GsL~~~l~~---~~~l~~~~~~~~~  123 (125)
                            ...++++|||+. |+|.++++.   .+.+++..+..++
T Consensus       100 ~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~  142 (337)
T 3ll6_A          100 EESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIF  142 (337)
T ss_dssp             TTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHH
T ss_pred             cccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHH
Confidence                  345899999997 599999876   3568887776654

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=98.90  E-value=1.2e-10  Score=80.02  Aligned_cols=91  Identities=12%  Similarity=0.209  Sum_probs=62.6

Q ss_pred             CCCCCchhHHHHHHH----HHhhcCCCcccc----------HHhhhHHHHHHHHHhcCCCceeeeeeeEEeC-----CeE
Q psy14717         32 LPAGIFTDSFRDFVD----RCLKKNPSERAD----------LKTLSATTILKVLHECNFAHIVGFYGAFISD-----QDI   92 (125)
Q Consensus        32 lg~g~fg~v~~~~~~----~~~~~~~~~~~~----------~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~-----~~~   92 (125)
                      ||.|+||.||++...    .+++........          .....+.+|+.+++.++||||+++++++...     ..+
T Consensus        30 lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  109 (362)
T 3pg1_A           30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKL  109 (362)
T ss_dssp             EEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEE
T ss_pred             eccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceE
Confidence            399999999985331    111111110000          0113567899999999999999999998652     368


Q ss_pred             EEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         93 SICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        93 ~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      |++|||+.+ +|.+++... ..+++..+..++
T Consensus       110 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~  140 (362)
T 3pg1_A          110 YLVTELMRT-DLAQVIHDQRIVISPQHIQYFM  140 (362)
T ss_dssp             EEEEECCSE-EHHHHHHCTTSCCCHHHHHHHH
T ss_pred             EEEEccCCC-CHHHHHHhcccCCCHHHHHHHH
Confidence            999999995 888888764 468887776554

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=98.89  E-value=2.8e-11  Score=85.24  Aligned_cols=93  Identities=13%  Similarity=0.206  Sum_probs=64.3

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHH-----hhhHHHHHHHHHhcCCCceeeeeeeEEeC--
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLK-----TLSATTILKVLHECNFAHIVGFYGAFISD--   89 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~e~~~~~~~~h~~iv~~~~~~~~~--   89 (125)
                      .|+.++.|        |.|+||.||++.+     .......+.+     .....+|+.+++.++|+||+++++++...  
T Consensus        55 ~y~~~~~l--------G~G~fg~Vy~~~~-----~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~  121 (420)
T 1j1b_A           55 SYTDTKVI--------GNGSFGVVYQAKL-----CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE  121 (420)
T ss_dssp             EEEEEEEE--------EECSSEEEEEEEE-----TTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEET
T ss_pred             eEEeeeEE--------eeCCCEEEEEEEE-----CCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCC
Confidence            56666666        9999999998533     1112212111     11244799999999999999999988652  


Q ss_pred             ----CeEEEEEEecCCCCHHHHHHH----cCCCCHHHHhhhh
Q psy14717         90 ----QDISICMEYMDGGSLDLILKK----AGKIPEHILGTIT  123 (125)
Q Consensus        90 ----~~~~iv~e~~~~GsL~~~l~~----~~~l~~~~~~~~~  123 (125)
                          ..++++|||+++ +|...+..    ...+++..++.++
T Consensus       122 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~  162 (420)
T 1j1b_A          122 KKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYM  162 (420)
T ss_dssp             TTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred             CCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHH
Confidence                237899999997 77766653    3568887766554

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=98.89  E-value=3.2e-10  Score=76.39  Aligned_cols=104  Identities=25%  Similarity=0.360  Sum_probs=62.2

Q ss_pred             CCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHH-HHHHHHHhcCCCceeeeee
Q psy14717         11 VPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSAT-TILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        11 ~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~-~e~~~~~~~~h~~iv~~~~   84 (125)
                      +....+.|+.++.|        |.|+||.||++...     .+++............... .+..+++.++|+||+++++
T Consensus        20 ~~~~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~   91 (318)
T 2dyl_A           20 YQAEINDLENLGEM--------GSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG   91 (318)
T ss_dssp             EECCGGGEEEEEEC--------------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred             hhhhhcccccccee--------eecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEE
Confidence            33455677777888        99999999985431     1111111111111111233 3444667789999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHH-cCCCCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKK-AGKIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~-~~~l~~~~~~~~~  123 (125)
                      ++..++.++++|||+ ++.+..+... ...+++..+..++
T Consensus        92 ~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~  130 (318)
T 2dyl_A           92 TFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMT  130 (318)
T ss_dssp             EEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHH
T ss_pred             EEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHH
Confidence            999999999999999 4567666654 3678887766554

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=98.88  E-value=1.7e-11  Score=84.99  Aligned_cols=92  Identities=4%  Similarity=-0.205  Sum_probs=58.1

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCC--ccccHHhhhHHHHHH---HHHhcCCCceeeee--
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPS--ERADLKTLSATTILK---VLHECNFAHIVGFY--   83 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~--~~~~~~~~~~~~e~~---~~~~~~h~~iv~~~--   83 (125)
                      +.|++.+.|        |.|+||.||++...     .+++....  .........+.+|+.   .++.++||||++++  
T Consensus        73 ~~y~~~~~l--------G~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~  144 (377)
T 3byv_A           73 RTLVRGTVL--------GQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLR  144 (377)
T ss_dssp             EEEEEEEEE--------EEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHC
T ss_pred             ceEEEccee--------ecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhh
Confidence            345555555        99999999986432     11111110  001112234668884   45556899999998  


Q ss_pred             -----eeEEeCC-----------------eEEEEEEecCCCCHHHHHHHcCCCCH
Q psy14717         84 -----GAFISDQ-----------------DISICMEYMDGGSLDLILKKAGKIPE  116 (125)
Q Consensus        84 -----~~~~~~~-----------------~~~iv~e~~~~GsL~~~l~~~~~l~~  116 (125)
                           +++..++                 ..|++|||+ +|+|.+++...+.+++
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~  198 (377)
T 3byv_A          145 FIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSS  198 (377)
T ss_dssp             BCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTT
T ss_pred             hhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhcccccc
Confidence                 5555443                 289999999 5799999997655655

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=98.87  E-value=1.9e-10  Score=77.91  Aligned_cols=97  Identities=21%  Similarity=0.229  Sum_probs=69.4

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH------HHhhcCCCccccHHhhhHHHHHHHHHhcCCC------ceeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD------RCLKKNPSERADLKTLSATTILKVLHECNFA------HIVGFY   83 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~------~iv~~~   83 (125)
                      +.|++++.|        |.|+||.||++...      .+++....  .......+.+|+.++..+.|+      ++++++
T Consensus        14 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~   83 (339)
T 1z57_A           14 ARYEIVDTL--------GEGAFGKVVECIDHKAGGRHVAVKIVKN--VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQML   83 (339)
T ss_dssp             TTEEEEEEE--------EEETTEEEEEEEETTTTTEEEEEEEECS--SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEE
T ss_pred             CceEEEEEE--------ecCCCeEEEEEEecCCCCcEEEEEEEec--CCchhHHHHHHHHHHHHhhhcCCCCceeeEeee
Confidence            478888888        99999999985321      01111111  111122456788888877665      499999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHcC--CCCHHHHhhhh
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~~  123 (125)
                      +++...+.++++|||+ +|+|.+++...+  .+++..+..++
T Consensus        84 ~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~  124 (339)
T 1z57_A           84 EWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMA  124 (339)
T ss_dssp             EEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHH
T ss_pred             cccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHH
Confidence            9999999999999999 779999998864  57777766554

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=98.87  E-value=4.4e-10  Score=74.97  Aligned_cols=96  Identities=15%  Similarity=0.035  Sum_probs=66.2

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCcccc-------HHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERAD-------LKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~-------~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      ..+.|++.+.|        |.|+||.||++.+.     ...+..+       .....+.+|+.++..+.|++++..+..+
T Consensus         7 ~~~~y~~~~~l--------g~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~   73 (296)
T 4hgt_A            7 VGNRYRLGRKI--------GSGSFGDIYLGTDI-----AAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWC   73 (296)
T ss_dssp             ----CEEEEEE--------EECSSSEEEEEEET-----TTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEE
T ss_pred             cCCceEEeeee--------cCCCCeEEEEEEEc-----CCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeee
Confidence            34577888888        99999999985421     1111111       1122467899999999887777666555


Q ss_pred             -EeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         87 -ISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        87 -~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                       ...+..+++|||+ +|+|.+++... ..+++..+..++
T Consensus        74 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~  111 (296)
T 4hgt_A           74 GAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLA  111 (296)
T ss_dssp             EEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHH
T ss_pred             cCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHH
Confidence             5677899999999 88999999863 568888776654

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=98.86  E-value=3.1e-11  Score=84.28  Aligned_cols=99  Identities=12%  Similarity=0.154  Sum_probs=63.8

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCe----
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD----   91 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~----   91 (125)
                      ..|++.+.|        |.|+||.||++....... ...+..........+|+.+++.++|+||+++++++.....    
T Consensus        40 ~~Y~~~~~l--------G~G~~g~V~~a~~~~~~~-~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~  110 (394)
T 4e7w_A           40 IAYTNCKVI--------GNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDE  110 (394)
T ss_dssp             EEEEEEEEE--------EEETTEEEEEEEETTTEE-EEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSC
T ss_pred             ceEEEeEEE--------eeCCCeEEEEEEECCCCe-EEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCc
Confidence            457777777        999999999853210000 0000000011123479999999999999999999976443    


Q ss_pred             --EEEEEEecCCCCHHHHHH---HcCCCCHHHHhhhh
Q psy14717         92 --ISICMEYMDGGSLDLILK---KAGKIPEHILGTIT  123 (125)
Q Consensus        92 --~~iv~e~~~~GsL~~~l~---~~~~l~~~~~~~~~  123 (125)
                        ++++|||++++.+.....   ....+++..++.++
T Consensus       111 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  147 (394)
T 4e7w_A          111 VFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM  147 (394)
T ss_dssp             EEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHH
T ss_pred             eEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHH
Confidence              899999999854433322   23578887776554

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=98.86  E-value=3e-10  Score=75.81  Aligned_cols=98  Identities=14%  Similarity=0.019  Sum_probs=68.0

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeE-E
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAF-I   87 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~-~   87 (125)
                      ..+.|++.+.|        |.|+||.||++...     .+++....   ......+.+|+.++..+.|++++..+..+ .
T Consensus         7 ~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~   75 (296)
T 3uzp_A            7 VGNRYRLGRKI--------GSGSFGDIYLGTDIAAGEEVAIKLECV---KTKHPQLHIESKIYKMMQGGVGIPTIRWCGA   75 (296)
T ss_dssp             ETTTEEEEEEE--------EEETTEEEEEEEETTTTEEEEEEEEES---CSSCCHHHHHHHHHHHHTTSTTCCCEEEEEE
T ss_pred             eccEEEEEEEE--------ccCCCeEEEEEEEcCCCcEEEEEEecC---CcchhHHHHHHHHHHHhhcCCCCCccccccC
Confidence            34567788888        99999999985421     01111000   01112467899999999888766666555 5


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .....+++|||+ +|+|.+++... ..+++..+..++
T Consensus        76 ~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~  111 (296)
T 3uzp_A           76 EGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLA  111 (296)
T ss_dssp             ETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHH
T ss_pred             CCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHH
Confidence            677899999999 88999999853 568887776654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=98.85  E-value=7.2e-10  Score=78.24  Aligned_cols=97  Identities=18%  Similarity=0.265  Sum_probs=68.8

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHH-----HhhcCCCccccHHhhhHHHHHHHHHhc------CCCceeeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDR-----CLKKNPSERADLKTLSATTILKVLHEC------NFAHIVGFYG   84 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~e~~~~~~~------~h~~iv~~~~   84 (125)
                      ..|++++.|        |.|+||.||++....     +++.....  ........+|+.++..+      .|+||+.+++
T Consensus        97 ~ry~~~~~L--------G~G~fg~V~~a~~~~~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~  166 (429)
T 3kvw_A           97 YRYEVLKVI--------GKGSFGQVVKAYDHKVHQHVALKMVRNE--KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLE  166 (429)
T ss_dssp             TTEEEEEEE--------EESSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEE
T ss_pred             CcEEEEEEc--------ccCccEEEEEEEECCCCcEEEEEEECCc--cchHHHHHHHHHHHHHHhhccccCCcCEEEEEe
Confidence            357777888        999999999853321     11111111  11122455677777765      6789999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHcC--CCCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~~  123 (125)
                      .+...+.++++|||+.+ +|.+++....  .+++..++.++
T Consensus       167 ~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~  206 (429)
T 3kvw_A          167 NFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFA  206 (429)
T ss_dssp             EEEETTEEEEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHH
T ss_pred             ecccCCeEEEEEeccCC-CHHHHHHhccCCCCCHHHHHHHH
Confidence            99999999999999975 9999998763  48887776654

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=98.85  E-value=2e-10  Score=79.51  Aligned_cols=97  Identities=16%  Similarity=0.205  Sum_probs=66.4

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcC--------CCceeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECN--------FAHIVGF   82 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~--------h~~iv~~   82 (125)
                      +.|++++.|        |.|+||.||++...     .+++....  .......+.+|+.+++.+.        |+||+++
T Consensus        37 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~  106 (397)
T 1wak_A           37 GRYHVIRKL--------GWGHFSTVWLSWDIQGKKFVAMKVVKS--AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQL  106 (397)
T ss_dssp             TTEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCE
T ss_pred             CeEEEEEEe--------eecCCeeEEEEEecCCCeEEEEEEEec--CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeee
Confidence            467777788        99999999985321     11111111  1112234668999888874        8889999


Q ss_pred             eeeEE----eCCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         83 YGAFI----SDQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~----~~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      ++.+.    ....++++|||+.+ +|.+.+...  +.+++..++.++
T Consensus       107 ~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~i~  152 (397)
T 1wak_A          107 LDDFKISGVNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLPCVKKII  152 (397)
T ss_dssp             EEEEEEEETTEEEEEEEECCCCC-BHHHHHHHTTTSCCCHHHHHHHH
T ss_pred             ecceeecCCCCceEEEEEeccCc-cHHHHHHhcccCCCCHHHHHHHH
Confidence            99987    45579999999955 666666554  468888776654

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=98.85  E-value=3.6e-10  Score=76.48  Aligned_cols=101  Identities=17%  Similarity=0.268  Sum_probs=68.7

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH------HHhhcCCCccc-cHHhhhHHHHHHHHHhc---CCCceeeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD------RCLKKNPSERA-DLKTLSATTILKVLHEC---NFAHIVGFY   83 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~------~~~~~~~~~~~-~~~~~~~~~e~~~~~~~---~h~~iv~~~   83 (125)
                      ..+.|++++.|        |.|+||.||++...      .+++....... ......+.+|+.+++.+   .||||++++
T Consensus         9 ~~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~   80 (326)
T 1blx_A            9 ADQQYECVAEI--------GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLF   80 (326)
T ss_dssp             GGGTEEEEEEE--------EEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEE
T ss_pred             chhceeeeeee--------cccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeee
Confidence            34678888888        99999999985321      01111110000 00112345677777765   899999999


Q ss_pred             eeEE-----eCCeEEEEEEecCCCCHHHHHHHcC--CCCHHHHhhhh
Q psy14717         84 GAFI-----SDQDISICMEYMDGGSLDLILKKAG--KIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~-----~~~~~~iv~e~~~~GsL~~~l~~~~--~l~~~~~~~~~  123 (125)
                      +++.     ....++++|||+. |+|.+++....  .+++..+..++
T Consensus        81 ~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~  126 (326)
T 1blx_A           81 DVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMM  126 (326)
T ss_dssp             EEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHH
T ss_pred             eeeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHH
Confidence            9987     4567999999999 49999998753  48887766554

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=98.80  E-value=1.2e-09  Score=78.36  Aligned_cols=97  Identities=14%  Similarity=0.048  Sum_probs=66.9

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCC-CceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNF-AHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h-~~iv~~~~~~~~   88 (125)
                      .+.|++.+.|        |.|+||.||++.+.     .+++....   ......+.+|+.+++.+.| +++..+..++..
T Consensus         6 ~~~y~i~~~L--------G~G~fG~Vy~a~~~~~~~~vAvK~~~~---~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~   74 (483)
T 3sv0_A            6 GNKFRLGRKI--------GSGSFGEIYLGTNIQTNEEVAIKLENV---KTKHPQLLYESKIYRILQGGTGIPNVRWFGVE   74 (483)
T ss_dssp             TTTEECCCCC--------EECSSCEEEEEEETTTCCEEEEEEEET---TCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEE
T ss_pred             CCcEEEEEEE--------eeCCCEEEEEEEECCCCcEEEEEEecc---ccccHHHHHHHHHHHHhcCCCCCCeEEEEEee
Confidence            3467777777        99999999985421     11111000   0111246689999999876 555555566677


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ....+|+|||+ +|+|.++++.. +.+++..+..++
T Consensus        75 ~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~  109 (483)
T 3sv0_A           75 GDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLA  109 (483)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHH
T ss_pred             CCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHH
Confidence            88899999999 88999999863 578888877664

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=98.80  E-value=1.7e-10  Score=79.86  Aligned_cols=97  Identities=13%  Similarity=0.237  Sum_probs=68.3

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ..|+..+.|        |.|+||.||++...     .+++...... .......+.+|+.+++.++||||+++++++...
T Consensus        42 ~~y~~~~~l--------G~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~  113 (371)
T 4exu_A           42 KTYVSPTHV--------GSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPA  113 (371)
T ss_dssp             TTEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             ccEEEEeEE--------ecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheecc
Confidence            356666677        99999999986432     1222211111 111223567899999999999999999999877


Q ss_pred             CeE------EEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDI------SICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~------~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +..      +++|||+.+ +|.+++..  .+++..+..++
T Consensus       114 ~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~i~  150 (371)
T 4exu_A          114 SSLRNFYDFYLVMPFMQT-DLQKIMGM--EFSEEKIQYLV  150 (371)
T ss_dssp             SSSTTCCCCEEEEECCCE-EHHHHTTS--CCCHHHHHHHH
T ss_pred             CCcccceeEEEEEccccc-cHHHHhhc--CCCHHHHHHHH
Confidence            654      999999995 89887744  48887776554

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.77  E-value=2.1e-09  Score=75.96  Aligned_cols=73  Identities=15%  Similarity=0.155  Sum_probs=53.9

Q ss_pred             CCCCchhHHHHHHHHHhhcCCCccccHH------hhhHHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         33 PAGIFTDSFRDFVDRCLKKNPSERADLK------TLSATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        33 g~g~fg~v~~~~~~~~~~~~~~~~~~~~------~~~~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      |.|+||.||..     . .......+.+      .....+|+.++..+ +||||+++++++.....+||+||||. |+|.
T Consensus        24 G~G~~g~V~~~-----~-~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~   96 (434)
T 2rio_A           24 GYGSSGTVVFQ-----G-SFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQ   96 (434)
T ss_dssp             EECSTTCEEEE-----E-ESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHH
T ss_pred             eeCCCeEEEEE-----E-EECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHH
Confidence            99999999741     0 1111111111      12356899999875 89999999999999999999999997 5999


Q ss_pred             HHHHHcC
Q psy14717        106 LILKKAG  112 (125)
Q Consensus       106 ~~l~~~~  112 (125)
                      +++....
T Consensus        97 ~~l~~~~  103 (434)
T 2rio_A           97 DLVESKN  103 (434)
T ss_dssp             HHHHTC-
T ss_pred             HHHhccC
Confidence            9998754

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.74  E-value=8.9e-10  Score=77.93  Aligned_cols=47  Identities=15%  Similarity=0.248  Sum_probs=43.0

Q ss_pred             HHHHHHHHHhc-CCCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         64 ATTILKVLHEC-NFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        64 ~~~e~~~~~~~-~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ..+|+.+++.+ .||||+++++++.+...+||+||||.+ +|.+++...
T Consensus        64 ~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~g-~L~~~l~~~  111 (432)
T 3p23_A           64 ADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA-TLQEYVEQK  111 (432)
T ss_dssp             CHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHSS
T ss_pred             HHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCCC-CHHHHHHhc
Confidence            45799999998 899999999999999999999999985 999999875

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.72  E-value=7.4e-10  Score=80.41  Aligned_cols=80  Identities=16%  Similarity=0.090  Sum_probs=51.3

Q ss_pred             CCCCCCchhHHHHHHH---HHhhcCCCcccc---H----HhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecC
Q psy14717         31 KLPAGIFTDSFRDFVD---RCLKKNPSERAD---L----KTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMD  100 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~---~~~~~~~~~~~~---~----~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~  100 (125)
                      .||+|+||.||++...   .+.+....+...   .    ....+.+|+.+++.++||||+.+..++...+..||+||||+
T Consensus       343 ~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~  422 (540)
T 3en9_A          343 LIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYIN  422 (540)
T ss_dssp             -----CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCC
T ss_pred             EEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCC
Confidence            4599999999964110   011111111110   0    12246799999999999999966666667777899999999


Q ss_pred             CCCHHHHHHH
Q psy14717        101 GGSLDLILKK  110 (125)
Q Consensus       101 ~GsL~~~l~~  110 (125)
                      +|+|.++++.
T Consensus       423 ggsL~~~l~~  432 (540)
T 3en9_A          423 GKLAKDVIED  432 (540)
T ss_dssp             SEEHHHHSTT
T ss_pred             CCCHHHHHHH
Confidence            9999998865

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=98.72  E-value=6.5e-10  Score=76.48  Aligned_cols=98  Identities=21%  Similarity=0.245  Sum_probs=69.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcC-----------CCc
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECN-----------FAH   78 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-----------h~~   78 (125)
                      ...|++++.|        |.|+||.||++...     .+++....  .......+.+|+.++..+.           |+|
T Consensus        18 ~~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~   87 (373)
T 1q8y_A           18 DARYILVRKL--------GWGHFSTVWLAKDMVNNTHVAMKIVRG--DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANH   87 (373)
T ss_dssp             TTTEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTT
T ss_pred             CCeEEEEEee--------eecCCeEEEEEEecCCCcEEEEEEecC--CccchhhhhHHHHHHHHhhcccccchhccccch
Confidence            3578888888        99999999985421     11111111  1112224567888888765           899


Q ss_pred             eeeeeeeEEeCC----eEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         79 IVGFYGAFISDQ----DISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        79 iv~~~~~~~~~~----~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      |+++++++....    .++++||++ +|+|.+++...  ..+++..+..++
T Consensus        88 i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~  137 (373)
T 1q8y_A           88 ILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQIS  137 (373)
T ss_dssp             BCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHH
T ss_pred             HHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHH
Confidence            999999998654    799999999 78999999874  458887766554

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=98.69  E-value=2.8e-10  Score=78.09  Aligned_cols=97  Identities=14%  Similarity=0.235  Sum_probs=67.2

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ..|+..+.|        |.|+||.||++...     .+++...... .......+.+|+.+++.++||||+++++++...
T Consensus        24 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   95 (353)
T 3coi_A           24 KTYVSPTHV--------GSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPA   95 (353)
T ss_dssp             TTEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             ceEEEeeeE--------ecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecc
Confidence            356666777        99999999986431     1122111111 111223567899999999999999999999876


Q ss_pred             Ce------EEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QD------ISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~------~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..      .+++|||+.+ +|.+++..  .+++..+..++
T Consensus        96 ~~~~~~~~~~lv~e~~~~-~l~~~~~~--~~~~~~~~~i~  132 (353)
T 3coi_A           96 SSLRNFYDFYLVMPFMQT-DLQKIMGL--KFSEEKIQYLV  132 (353)
T ss_dssp             SSGGGCCCCEEEEECCSE-EGGGTTTS--CCCHHHHHHHH
T ss_pred             cccccceeEEEEeccccC-CHHHHhcC--CCCHHHHHHHH
Confidence            54      4999999995 88887744  48877766554

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=98.68  E-value=2e-09  Score=73.44  Aligned_cols=97  Identities=16%  Similarity=0.142  Sum_probs=68.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCc------eeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD------RCLKKNPSERADLKTLSATTILKVLHECNFAH------IVGFY   83 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~------iv~~~   83 (125)
                      +.|++++.|        |.|+||.||++...      .+++....  .......+.+|+.+++.+.|++      ++.+.
T Consensus        19 ~~y~~~~~l--------g~G~~g~V~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~   88 (355)
T 2eu9_A           19 ERYEIVGNL--------GEGTFGKVVECLDHARGKSQVALKIIRN--VGKYREAARLEINVLKKIKEKDKENKFLCVLMS   88 (355)
T ss_dssp             TTEEEEEEE--------EEETTEEEEEEEETTTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEE
T ss_pred             ccEEEEEEe--------eccCCeEEEEEEecCCCceEEEEEEEcc--cccchhHHHHHHHHHHHHhhcCCCCceeEEEee
Confidence            578888888        99999999985321      01111110  1112234567888888877665      89999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      +.+...+..+++|||+ +|+|.+++...  ..+++..+..++
T Consensus        89 ~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~  129 (355)
T 2eu9_A           89 DWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMA  129 (355)
T ss_dssp             EEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHH
T ss_pred             eeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHH
Confidence            9999999999999999 55777777765  368887776654

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=98.66  E-value=2.8e-09  Score=73.98  Aligned_cols=97  Identities=14%  Similarity=0.192  Sum_probs=66.3

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcC-CC-----ceeeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECN-FA-----HIVGFYG   84 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-h~-----~iv~~~~   84 (125)
                      +.|++.+.|        |.|+||.||++...     .+++.....  ........+|+.++..+. |+     +++.+.+
T Consensus        54 ~~y~~~~~l--------G~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  123 (382)
T 2vx3_A           54 DRYEIDSLI--------GKGSFGQVVKAYDRVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKR  123 (382)
T ss_dssp             TTEEEEEEE--------EEETTEEEEEEEETTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEE
T ss_pred             eeEEEEEEE--------eecCCEEEEEEEEcCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeee
Confidence            466676777        99999999985321     111111111  111123456777777653 44     5999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      .+...+.++++|||+.+ +|.+++...  +.+++..++.++
T Consensus       124 ~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~  163 (382)
T 2vx3_A          124 HFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFA  163 (382)
T ss_dssp             EEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHH
T ss_pred             eeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHH
Confidence            99999999999999975 999999875  458877766554

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=98.45  E-value=8.9e-09  Score=71.12  Aligned_cols=85  Identities=11%  Similarity=-0.046  Sum_probs=45.0

Q ss_pred             HHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc--ccHHhhhHHHHHHHHHhc--CCCceeeee-----
Q psy14717         18 FELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER--ADLKTLSATTILKVLHEC--NFAHIVGFY-----   83 (125)
Q Consensus        18 ~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~e~~~~~~~--~h~~iv~~~-----   83 (125)
                      |+..+.|        |.|+||.||++.+.     .+++......  .......+.+|+.++..+  .|||+++++     
T Consensus        64 y~~~~~l--------G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~  135 (371)
T 3q60_A           64 LKLVEPL--------RVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLL  135 (371)
T ss_dssp             EEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCC
T ss_pred             eeeeeec--------cCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEe
Confidence            5566666        99999999986432     1222211111  111122455675444443  699988755     


Q ss_pred             --eeEEeC-----------------CeEEEEEEecCCCCHHHHHHHc
Q psy14717         84 --GAFISD-----------------QDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        84 --~~~~~~-----------------~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                        +.+..+                 ..+|||||||. |+|.++++..
T Consensus       136 p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~  181 (371)
T 3q60_A          136 PSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL  181 (371)
T ss_dssp             CCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH
T ss_pred             eehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh
Confidence              344332                 33899999999 7999999874

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=97.79  E-value=9.7e-07  Score=59.11  Aligned_cols=40  Identities=18%  Similarity=0.218  Sum_probs=32.2

Q ss_pred             hHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHH
Q psy14717         63 SATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDL  106 (125)
Q Consensus        63 ~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~  106 (125)
                      .+.+|+.+++.++  | +++++.+.. +..|++||||++|+|.+
T Consensus       150 ~~~~E~~~l~~l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~  189 (282)
T 1zar_A          150 SARNEFRALQKLQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR  189 (282)
T ss_dssp             HHHHHHHHHHHTT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG
T ss_pred             HHHHHHHHHHhcc--C-CCcCeEEec-cceEEEEEecCCCcHHH
Confidence            4678999999998  4 677765544 45699999999999987

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=96.28  E-value=0.00051  Score=45.13  Aligned_cols=44  Identities=11%  Similarity=0.045  Sum_probs=28.1

Q ss_pred             hHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCC-C----CHHHHH
Q psy14717         63 SATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDG-G----SLDLIL  108 (125)
Q Consensus        63 ~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~-G----sL~~~l  108 (125)
                      .+.+|+.++..+.|+++.... .+.. ...+|+|||+.+ |    +|.++.
T Consensus       116 ~~~~E~~~l~~l~~~~i~~p~-~~~~-~~~~lVmE~~g~~g~~~~~L~~~~  164 (258)
T 1zth_A          116 WTEKEFRNLERAKEAGVSVPQ-PYTY-MKNVLLMEFIGEDELPAPTLVELG  164 (258)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCC-EEEE-ETTEEEEECCEETTEECCBHHHHG
T ss_pred             HHHHHHHHHHHHHhCCCCCCe-EEEc-CCCEEEEEecCCCCCccccHHHHh
Confidence            456899999998877642221 1111 246899999943 4    677654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=95.33  E-value=0.034  Score=36.05  Aligned_cols=45  Identities=9%  Similarity=-0.163  Sum_probs=37.9

Q ss_pred             hHHHHHHHHHhcC-CCceeeeeeeEEeCCeEEEEEEecCCCCHHHH
Q psy14717         63 SATTILKVLHECN-FAHIVGFYGAFISDQDISICMEYMDGGSLDLI  107 (125)
Q Consensus        63 ~~~~e~~~~~~~~-h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~  107 (125)
                      .+.+|+.++..+. +..+..+++.....+..|++|||++|.+|.+.
T Consensus        55 ~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~  100 (263)
T 3tm0_A           55 DVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEE  100 (263)
T ss_dssp             CHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhc
Confidence            4678999998874 66777888888888899999999999998774

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=94.80  E-value=0.0036  Score=43.81  Aligned_cols=45  Identities=9%  Similarity=-0.209  Sum_probs=24.7

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCC-Ccccc-HHhhhHHHHHHHHHhcCC
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNP-SERAD-LKTLSATTILKVLHECNF   76 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~-~~~~~-~~~~~~~~e~~~~~~~~h   76 (125)
                      ||+|+||.||++.+.     .++|... ..... .....+.+|+.++..+.|
T Consensus        86 LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~  137 (413)
T 3dzo_A           86 LGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG  137 (413)
T ss_dssp             EEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTT
T ss_pred             cccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhcc
Confidence            599999999986532     1222211 11111 112245678888888766

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=94.60  E-value=0.00063  Score=47.75  Aligned_cols=40  Identities=10%  Similarity=-0.022  Sum_probs=23.3

Q ss_pred             HHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHHHH
Q psy14717         66 TILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI  107 (125)
Q Consensus        66 ~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~  107 (125)
                      +|...+..+.+.++.....+....+  +|+|||+.|++|..+
T Consensus       162 kE~~nL~rL~~~gv~vp~p~~~~~~--~LVME~i~G~~L~~l  201 (397)
T 4gyi_A          162 KEFAFMKALYEEGFPVPEPIAQSRH--TIVMSLVDALPMRQV  201 (397)
T ss_dssp             HHHHHHHHHHHTTCSCCCEEEEETT--EEEEECCSCEEGGGC
T ss_pred             HHHHHHHHHHhcCCCCCeeeeccCc--eEEEEecCCccHhhh
Confidence            4666666665444332222222222  699999999887543

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=93.05  E-value=0.085  Score=33.81  Aligned_cols=43  Identities=7%  Similarity=-0.107  Sum_probs=32.6

Q ss_pred             hHHHHHHHHHhcCCCc--eeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         63 SATTILKVLHECNFAH--IVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        63 ~~~~e~~~~~~~~h~~--iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      .+.+|+.+++.+.+.+  +..+++....++..+++|||++|.+|.
T Consensus        59 ~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           59 ELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             CHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             hhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence            4567888888875434  445777777777789999999998874

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=88.97  E-value=1.3  Score=28.53  Aligned_cols=48  Identities=13%  Similarity=0.072  Sum_probs=36.3

Q ss_pred             hHHHHHHHHHhcC-CCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHH
Q psy14717         63 SATTILKVLHECN-FAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK  110 (125)
Q Consensus        63 ~~~~e~~~~~~~~-h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~  110 (125)
                      .+.+|...++.+. +-.+.+++.+..+.+..|++||+++|.++.+....
T Consensus        65 ~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~  113 (272)
T 4gkh_A           65 DVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEE  113 (272)
T ss_dssp             HHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccC
Confidence            4667888888763 33455677777888889999999999888775543

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=85.07  E-value=0.84  Score=30.95  Aligned_cols=75  Identities=12%  Similarity=0.177  Sum_probs=42.1

Q ss_pred             CCCCCCchhHHHHHHH---HHhhcCC--CccccHHhhhHHHHHHHHHhcC--CCceeeeeeeEEeC---CeEEEEEEecC
Q psy14717         31 KLPAGIFTDSFRDFVD---RCLKKNP--SERADLKTLSATTILKVLHECN--FAHIVGFYGAFISD---QDISICMEYMD  100 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~---~~~~~~~--~~~~~~~~~~~~~e~~~~~~~~--h~~iv~~~~~~~~~---~~~~iv~e~~~  100 (125)
                      .++.|.++.+|.....   .+++..+  ..........+.+|..+++.+.  +..+.+++..+.+.   ...|++|||++
T Consensus        45 ~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~  124 (359)
T 3dxp_A           45 QFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVS  124 (359)
T ss_dssp             ECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCC
T ss_pred             EcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecC
Confidence            3567888888863211   1122221  1110111235668999999876  44566777766655   34789999999


Q ss_pred             CCCHH
Q psy14717        101 GGSLD  105 (125)
Q Consensus       101 ~GsL~  105 (125)
                      |.++.
T Consensus       125 G~~l~  129 (359)
T 3dxp_A          125 GRVLW  129 (359)
T ss_dssp             CBCCC
T ss_pred             CeecC
Confidence            98763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	125
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	8e-12
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-10
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-09
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	9e-04
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-09
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	0.001
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-09
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	8e-07
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	6e-09
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-04
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-08
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	0.003
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-08
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	5e-04
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-08
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	0.001
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-07
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	0.001
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-07
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	7e-04
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-07
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	5e-05
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-07
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	0.003
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	6e-07
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-05
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	8e-07
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-04
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-06
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	8e-04
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	1e-06
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	4e-05
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-06
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	0.003
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-06
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	3e-04
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-06
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	0.003
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-06
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	0.003
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-06
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-04
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-06
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-04
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-06
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-05
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	4e-06
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-04
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-06
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	0.002
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-06
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-04
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-05
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-05
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-04
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-05
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	5e-04
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-05
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	0.001
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-05
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	6e-05
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-05
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	9e-04
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-05
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-04
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	4e-05
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	4e-05
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-05
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	4e-05
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	8e-04
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	5e-05
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-05
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	0.004
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	8e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	8e-05
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-04
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-04
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	3e-04
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-04
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-04
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	0.002
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-04
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-04
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	8e-04
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	0.001
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	9e-04
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	0.001
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	0.002
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	0.002
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	0.003
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	0.003
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	0.004

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 8e-12
 Identities = 41/56 (73%), Positives = 49/56 (87%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT 123
           L+VLHECN  +IVGFYGAF SD +ISICME+MDGGSLD +LKKAG+IPE ILG ++
Sbjct: 55  LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS 110

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.7 bits (131), Expect = 2e-10
 Identities = 33/56 (58%), Positives = 42/56 (75%), Gaps = 5/56 (8%)

Query: 14  PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           PMAIFELLDYIVNEPPPKLP+G+F+  F+DFV++CL KNP+ER          ++ 
Sbjct: 247 PMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAER-----ADLKQLMV 297

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 52.0 bits (124), Expect = 1e-09
 Identities = 15/69 (21%), Positives = 28/69 (40%)

Query: 49  LKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLIL 108
           +K    +  + K  S    + VLH+    +IV     + S   + + M+ + GG L   +
Sbjct: 39  IKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRI 98

Query: 109 KKAGKIPEH 117
            + G   E 
Sbjct: 99  VEKGFYTER 107

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.4 bits (81), Expect = 9e-04
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 6/56 (10%)

Query: 14  PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
              +FE +     E        I +DS +DF+   ++K+P +R      +    L+
Sbjct: 214 DAKLFEQILKAEYEFDSPYWDDI-SDSAKDFIRHLMEKDPEKR-----FTCEQALQ 263

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 50.8 bits (121), Expect = 3e-09
 Identities = 10/51 (19%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEH 117
           + ++++ +   ++  + AF    ++ + +E++ GG L D I  +  K+ E 
Sbjct: 77  ISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEA 127

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 35.4 bits (81), Expect = 0.001
 Identities = 9/56 (16%), Positives = 21/56 (37%), Gaps = 6/56 (10%)

Query: 14  PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
            +   + +     E      + + +   +DF+   L+K P +R     L+    L+
Sbjct: 233 DLETLQNVKRCDWEFDEDAFSSV-SPEAKDFIKNLLQKEPRKR-----LTVHDALE 282

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.8 bits (121), Expect = 4e-09
 Identities = 10/56 (17%), Positives = 25/56 (44%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT 123
           ++ L +    + + + G ++ +    + MEY  G + DL+      + E  +  +T
Sbjct: 66  VRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVT 121

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.2 bits (104), Expect = 8e-07
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 5/63 (7%)

Query: 7   SGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATT 66
                   M     L +I     P L +G +++ FR+FVD CL+K P +R      ++  
Sbjct: 209 ERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDR-----PTSEV 263

Query: 67  ILK 69
           +LK
Sbjct: 264 LLK 266

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.1 bits (119), Expect = 6e-09
 Identities = 15/67 (22%), Positives = 30/67 (44%)

Query: 50  KKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILK 109
           K+   ++ +   L+   +L ++   +   IV    AF +   +S  ++ M+GG L   L 
Sbjct: 40  KRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLS 99

Query: 110 KAGKIPE 116
           + G   E
Sbjct: 100 QHGVFSE 106

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.4 bits (86), Expect = 2e-04
 Identities = 8/66 (12%), Positives = 21/66 (31%), Gaps = 1/66 (1%)

Query: 4   ISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLS 63
           + G              +D +      +LP    +   R  ++  L+++ + R       
Sbjct: 200 LRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF-SPELRSLLEGLLQRDVNRRLGCLGRG 258

Query: 64  ATTILK 69
           A  + +
Sbjct: 259 AQEVKE 264

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.3 bits (117), Expect = 1e-08
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 48  CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI 107
            LKK+     D    +      +        +   +  F + +++   MEY++GG L   
Sbjct: 34  ALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYH 93

Query: 108 LKKAGKIPE 116
           ++   K   
Sbjct: 94  IQSCHKFDL 102

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.003
 Identities = 8/38 (21%), Positives = 15/38 (39%), Gaps = 2/38 (5%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSER 56
           EL   I  + P   P  +     +D + +   + P +R
Sbjct: 210 ELFHSIRMDNPF-YPRWL-EKEAKDLLVKLFVREPEKR 245

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 48.5 bits (115), Expect = 2e-08
 Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHILGTIT 123
           ++ +       +V  + AF  D ++ +  E+M GG L + +  +  K+ E       
Sbjct: 74  IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYM 130

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 36.2 bits (83), Expect = 5e-04
 Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 9/54 (16%)

Query: 19  ELLDYIVN---EPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           E L  + +          +GI ++  +DF+ + L  +P+ R     ++    L+
Sbjct: 232 ETLRNVKSCDWNMDDSAFSGI-SEDGKDFIRKLLLADPNTR-----MTIHQALE 279

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (114), Expect = 3e-08
 Identities = 12/55 (21%), Positives = 19/55 (34%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT 123
            V+   +    V  Y  F  D+ +   + Y   G L   ++K G   E      T
Sbjct: 60  DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT 114

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 0.001
 Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 18  FELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           + +   I+       P   F    RD V++ L  + ++R   + +     LK
Sbjct: 216 YLIFQKIIKLEYD-FPEKFF-PKARDLVEKLLVLDATKRLGCEEMEGYGPLK 265

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (110), Expect = 1e-07
 Identities = 12/55 (21%), Positives = 23/55 (41%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTI 122
           +++       +I+  YG F     + + +EY   G++   L+K  K  E    T 
Sbjct: 57  VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY 111

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (80), Expect = 0.001
 Identities = 14/51 (27%), Positives = 20/51 (39%), Gaps = 7/51 (13%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           E    I        P  + T+  RD + R LK NPS+R          +L+
Sbjct: 211 ETYKRISRVEFT-FPDFV-TEGARDLISRLLKHNPSQR-----PMLREVLE 254

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.6 bits (110), Expect = 1e-07
 Identities = 13/90 (14%), Positives = 42/90 (46%), Gaps = 6/90 (6%)

Query: 35  GIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISI 94
            + T S + ++ + +K   +++  +K       + +L+     +I+  + +F S +++ +
Sbjct: 24  CVETSSKKTYMAKFVKVKGTDQVLVKK-----EISILNIARHRNILHLHESFESMEELVM 78

Query: 95  CMEYMDGGSL-DLILKKAGKIPEHILGTIT 123
             E++ G  + + I   A ++ E  + +  
Sbjct: 79  IFEFISGLDIFERINTSAFELNEREIVSYV 108

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 7e-04
 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 9/54 (16%)

Query: 19  ELLDYIVN---EPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           ++++ I+N       +    I +    DFVDR L K    R     ++A+  L+
Sbjct: 210 QIIENIMNAEYTFDEEAFKEI-SIEAMDFVDRLLVKERKSR-----MTASEALQ 257

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (109), Expect = 1e-07
 Identities = 11/46 (23%), Positives = 26/46 (56%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGK 113
           + +L  C+  +IV    AF  + ++ I +E+  GG++D ++ +  +
Sbjct: 60  IDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELER 105

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 5e-05
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 6/53 (11%)

Query: 18  FELLDYIVNEPPPKLPAGI-FTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
             +L  I    PP L     ++ +F+DF+ +CL+KN   R      + + +L+
Sbjct: 221 MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDAR-----WTTSQLLQ 268

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 44.7 bits (105), Expect = 5e-07
 Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 4/54 (7%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDIS----ICMEYMDGGSLDLILKKAGKIPEH 117
            +     N   IV  Y    ++        I MEY+DG +L  I+   G +   
Sbjct: 58  AQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK 111

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 33.9 bits (77), Expect = 0.003
 Identities = 10/40 (25%), Positives = 13/40 (32%), Gaps = 2/40 (5%)

Query: 19  ELLDYIVNE--PPPKLPAGIFTDSFRDFVDRCLKKNPSER 56
            +    V E   PP       +      V + L KNP  R
Sbjct: 221 SVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 260

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (104), Expect = 6e-07
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 68  LKVLHECNFAHIVGFYGAFI--SDQDISICMEYMDGGSLDLILKKAGKIPEHI 118
           + +L E    +IV +Y   I  ++  + I MEY +GG L  ++ K  K  +++
Sbjct: 54  VNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 106

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 3e-05
 Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 6/51 (11%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           EL   I      ++P   ++D   + + R L      R      S   IL+
Sbjct: 221 ELAGKIREGKFRRIPYR-YSDELNEIITRMLNLKDYHR-----PSVEEILE 265

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 8e-07
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQD-ISICMEYMDGGSLDLILKKAGKIP 115
             V+ +   +++V   G  + ++  + I  EYM  GSL   L+  G+  
Sbjct: 51  ASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSV 99

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 2e-04
 Identities = 6/59 (10%), Positives = 19/59 (32%), Gaps = 6/59 (10%)

Query: 15  MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHE 73
           + + +++  +        P G    +  + +  C   + + R      S   + + L  
Sbjct: 204 IPLKDVVPRVEKGYKMDAPDGC-PPAVYEVMKNCWHLDAAMR-----PSFLQLREQLEH 256

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 1e-06
 Identities = 15/66 (22%), Positives = 22/66 (33%), Gaps = 2/66 (3%)

Query: 48  CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI 107
            LK +         +S   +L  L   N  +IV   GA        +  EY   G L   
Sbjct: 60  MLKPSAHLTEREALMSELKVLSYL--GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNF 117

Query: 108 LKKAGK 113
           L++   
Sbjct: 118 LRRKRD 123

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 8e-04
 Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 5/67 (7%)

Query: 8   GSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTI 67
           GS+    M +      ++ E    L          D +  C   +P +R      +   I
Sbjct: 244 GSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKR-----PTFKQI 298

Query: 68  LKVLHEC 74
           ++++ + 
Sbjct: 299 VQLIEKQ 305

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 1e-06
 Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHILGTI 122
            +++H+ +  +IV   G     + + + ME   GG L   ++ K  +IP   +  +
Sbjct: 60  AQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL 114

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 4e-05
 Identities = 7/59 (11%), Positives = 18/59 (30%), Gaps = 6/59 (10%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFA 77
           E++ +I      + P           +  C      +R         T+ + +  C ++
Sbjct: 220 EVMAFIEQGKRMECPPEC-PPELYALMSDCWIYKWEDRP-----DFLTVEQRMRACYYS 272

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 1e-06
 Identities = 12/55 (21%), Positives = 21/55 (38%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTI 122
           + +    N  ++V FYG         + +EY  GG L   ++    +PE      
Sbjct: 54  ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRF 108

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (77), Expect = 0.003
 Identities = 9/58 (15%), Positives = 18/58 (31%), Gaps = 5/58 (8%)

Query: 12  PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
            +P    +       +     P      +    + + L +NPS R     ++   I K
Sbjct: 207 DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSAR-----ITIPDIKK 259

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 2e-06
 Identities = 12/52 (23%), Positives = 26/52 (50%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHIL 119
           + V+ E    +IV +  +++   ++ + MEY+ GGSL  ++ +       I 
Sbjct: 68  ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA 119

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (84), Expect = 3e-04
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 6/53 (11%)

Query: 18  FELLDYIVNEPPPKLPAG-IFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
              L  I     P+L      +  FRDF++RCL  +  +R      SA  +L+
Sbjct: 222 LRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR-----GSAKELLQ 269

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 42.7 bits (100), Expect = 2e-06
 Identities = 9/56 (16%), Positives = 20/56 (35%), Gaps = 2/56 (3%)

Query: 67  ILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTI 122
           IL+ +      +I+     + ++    +  + M  G L   L +   + E     I
Sbjct: 62  ILRKVSGHP--NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKI 115

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 33.5 bits (76), Expect = 0.003
 Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 7/53 (13%)

Query: 19  ELLDYIVNE--PPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
            +L  I++            ++D+ +D V R L   P +R      +A   L 
Sbjct: 222 LMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKR-----YTAEEALA 269

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 2e-06
 Identities = 16/69 (23%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 49  LKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLI 107
           LK+          +S   ++  L   +  +IV   GA      I +  EY   G L + +
Sbjct: 75  LKEKADSSEREALMSELKMMTQL--GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 132

Query: 108 LKKAGKIPE 116
             K  K  E
Sbjct: 133 RSKREKFSE 141

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.6 bits (76), Expect = 0.003
 Identities = 8/53 (15%), Positives = 13/53 (24%), Gaps = 6/53 (11%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVL 71
                I N      P    T+     +  C   +  +R      S   +   L
Sbjct: 275 NFYKLIQNGFKMDQPFYA-TEEIYIIMQSCWAFDSRKRP-----SFPNLTSFL 321

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 2e-06
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 68  LKVLHECNFAHIVGFYGAFIS----DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT 123
            ++L      +IV FY ++ S     + I +  E M  G+L   LK+   +   +L +  
Sbjct: 59  AEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWC 118

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (88), Expect = 1e-04
 Identities = 7/58 (12%), Positives = 20/58 (34%), Gaps = 5/58 (8%)

Query: 12  PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
                  ++   + +   P     +     ++ ++ C+++N  ER      S   +L 
Sbjct: 213 SECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER-----YSIKDLLN 265

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.8 bits (100), Expect = 2e-06
 Identities = 9/50 (18%), Positives = 23/50 (46%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEH 117
           + +L E    +++  +  + +  D+ + +E + GG L   L +   + E 
Sbjct: 64  VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEE 113

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 2e-04
 Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 6/57 (10%)

Query: 13  RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
                   +  +  E   +  +   +   +DF+ R L K+P +R     ++    L+
Sbjct: 220 TKQETLANVSAVNYEFEDEYFSNT-SALAKDFIRRLLVKDPKKR-----MTIQDSLQ 270

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (99), Expect = 3e-06
 Identities = 9/55 (16%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTI 122
             V+ + +  +IV   G   ++    + ME  + G L+  L++   + +  +  +
Sbjct: 59  ANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNIIEL 112

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 2e-05
 Identities = 8/55 (14%), Positives = 14/55 (25%), Gaps = 6/55 (10%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHE 73
           E+   +        PAG       D ++ C   +   R          +   L  
Sbjct: 218 EVTAMLEKGERMGCPAGC-PREMYDLMNLCWTYDVENR-----PGFAAVELRLRN 266

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 4e-06
 Identities = 13/51 (25%), Positives = 18/51 (35%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHI 118
             V+ E N  H+V   G     Q   + ME M  G L   L+       + 
Sbjct: 74  ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANN 124

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (84), Expect = 3e-04
 Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 6/56 (10%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHEC 74
           ++L +++       P     D   + +  C + NP  R      S   I+  + E 
Sbjct: 243 QVLRFVMEGGLLDKPDNC-PDMLFELMRMCWQYNPKMR-----PSFLEIISSIKEE 292

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 4e-06
 Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 1/56 (1%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHILGTI 122
            KV+   +   +V  YG     + I I  EYM  G L + + +   +     L  +
Sbjct: 50  AKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 105

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.002
 Identities = 7/55 (12%), Positives = 17/55 (30%), Gaps = 6/55 (10%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHE 73
           E  ++I        P    ++     +  C  +   ER      +   +L  + +
Sbjct: 209 ETAEHIAQGLRLYRPHLA-SEKVYTIMYSCWHEKADER-----PTFKILLSNILD 257

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.0 bits (98), Expect = 4e-06
 Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 5/81 (6%)

Query: 35  GIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISI 94
           G++         + LK++  E  +           V+ E    ++V   G    +    I
Sbjct: 36  GVWKKYSLTVAVKTLKEDTMEVEEFLKE-----AAVMKEIKHPNLVQLLGVCTREPPFYI 90

Query: 95  CMEYMDGGSLDLILKKAGKIP 115
             E+M  G+L   L++  +  
Sbjct: 91  ITEFMTYGNLLDYLRECNRQE 111

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.6 bits (84), Expect = 3e-04
 Identities = 9/59 (15%), Positives = 23/59 (38%), Gaps = 6/59 (10%)

Query: 15  MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHE 73
           + + ++ + +  +   + P G   +   + +  C + NPS+R      S   I +    
Sbjct: 220 IDLSQVYELLEKDYRMERPEGC-PEKVYELMRACWQWNPSDR-----PSFAEIHQAFET 272

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (95), Expect = 1e-05
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHILGTI 122
           + VL +    +I+ F G + +   ++I  ++ +G SL   +     K     L  I
Sbjct: 55  VGVLRKTRHVNILLFMG-YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 109

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 1e-05
 Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 48  CLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLI 107
            LK + +E+     +S   ++K++ +    +I+   GA   D  + + +EY   G+L   
Sbjct: 52  MLKSDATEKDLSDLISEMEMMKMIGKHK--NIINLLGACTQDGPLYVIVEYASKGNLREY 109

Query: 108 LKKAGKIP 115
           L+      
Sbjct: 110 LQARRPPG 117

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 1e-04
 Identities = 9/56 (16%), Positives = 18/56 (32%), Gaps = 6/56 (10%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHEC 74
           EL   +        P+   T+     +  C    PS+R      +   +++ L   
Sbjct: 245 ELFKLLKEGHRMDKPSNC-TNELYMMMRDCWHAVPSQR-----PTFKQLVEDLDRI 294

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 2e-05
 Identities = 9/56 (16%), Positives = 18/56 (32%), Gaps = 6/56 (10%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHEC 74
           +++  I N     +P      +    + +C   +PS R        T +   L   
Sbjct: 217 DVIGRIENGERLPMPPNC-PPTLYSLMTKCWAYDPSRR-----PRFTELKAQLSTI 266

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 5e-04
 Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 2/50 (4%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPE 116
              + + +  HIV   G   ++  + I ME    G L   +  +   +  
Sbjct: 59  ALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYSLDL 107

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 2e-05
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKK 110
            +V+ + +   +V  YG  +    I +  E+M+ G L   L+ 
Sbjct: 51  AEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT 93

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.001
 Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 6/55 (10%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHE 73
           E+++ I        P  + +      ++ C K+ P +R      + + +L+ L E
Sbjct: 210 EVVEDISTGFRLYKPR-LASTHVYQIMNHCWKERPEDR-----PAFSRLLRQLAE 258

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 2e-05
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 1/48 (2%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIP 115
             ++ +     +V  Y      + I I  EYM+ GSL   LK    I 
Sbjct: 59  ANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIK 105

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 6e-05
 Identities = 9/59 (15%), Positives = 19/59 (32%), Gaps = 6/59 (10%)

Query: 15  MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHE 73
           M   E++  +        P     +     +  C K+ P +R      +   +  VL +
Sbjct: 214 MTNPEVIQNLERGYRMVRPDNC-PEELYQLMRLCWKERPEDR-----PTFDYLRSVLED 266

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 3e-05
 Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 2/53 (3%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL-DLILKKAGKIPEHIL 119
           +  +H  +  +++  YG       + +  E    GSL D + K  G      L
Sbjct: 62  VNAMHSLDHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTL 113

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 9e-04
 Identities = 8/56 (14%), Positives = 16/56 (28%), Gaps = 5/56 (8%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHEC 74
           ++L  I  E               + + +C    P +R      +   +   L E 
Sbjct: 222 QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP-----TFVALRDFLLEA 272

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.4 bits (91), Expect = 3e-05
 Identities = 11/52 (21%), Positives = 20/52 (38%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHIL 119
             ++ E +  +IV   G     + + +  EYM  G L+  L+         L
Sbjct: 67  AALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSL 118

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 37.9 bits (87), Expect = 1e-04
 Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 6/59 (10%)

Query: 15  MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHE 73
           MA  E++ Y+ +      P         + +  C  K P++R      S  +I ++L  
Sbjct: 246 MAHEEVIYYVRDGNILACPENC-PLELYNLMRLCWSKLPADR-----PSFCSIHRILQR 298

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 4e-05
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 8/73 (10%)

Query: 51  KNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQD----ISICMEYMDGGSLDL 106
            +  ER+  +       + + HE    +I+GF  A   D      + +  +Y + GSL  
Sbjct: 35  SSREERSWFREAEIYQTVMLRHE----NILGFIAADNKDNGTWTQLWLVSDYHEHGSLFD 90

Query: 107 ILKKAGKIPEHIL 119
            L +     E ++
Sbjct: 91  YLNRYTVTVEGMI 103

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (90), Expect = 4e-05
 Identities = 13/69 (18%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 49  LKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLIL 108
           +K+  S+           +L  L   +  +I+   GA      + + +EY   G+L   L
Sbjct: 45  MKEYASKDDHRDFAGELEVLCKL--GHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 102

Query: 109 KKAGKIPEH 117
           +K+  +   
Sbjct: 103 RKSRVLETD 111

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (89), Expect = 6e-05
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 6/60 (10%)

Query: 15  MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHEC 74
           M   EL + +      + P     D   D + +C ++ P ER      S   IL  L+  
Sbjct: 230 MTCAELYEKLPQGYRLEKPLNC-DDEVYDLMRQCWREKPYER-----PSFAQILVSLNRM 283

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (90), Expect = 4e-05
 Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 6/55 (10%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHE 73
           E+LD +        P     +S  D + +C +K P ER      +   +   L +
Sbjct: 222 EVLDQVERGYRMPCPPEC-PESLHDLMCQCWRKEPEER-----PTFEYLQAFLED 270

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 8e-04
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHI 118
            +V+ +     +V  Y   +S++ I I  EYM  GSL   LK        +
Sbjct: 63  AQVMKKLRHEKLVQLYA-VVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL 112

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (90), Expect = 5e-05
 Identities = 15/67 (22%), Positives = 30/67 (44%)

Query: 50  KKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILK 109
             + SE  D    +A   +K+L E +  +I+G   AF    +IS+  ++M+     +I  
Sbjct: 33  LGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKD 92

Query: 110 KAGKIPE 116
            +  +  
Sbjct: 93  NSLVLTP 99

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.5 bits (89), Expect = 6e-05
 Identities = 8/51 (15%), Positives = 19/51 (37%), Gaps = 2/51 (3%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           +  + I+N      P   F +  +D + R + ++ S+R          +  
Sbjct: 208 KTYEKILNAELRFPP--FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 256

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.5 bits (76), Expect = 0.004
 Identities = 14/50 (28%), Positives = 26/50 (52%)

Query: 69  KVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHI 118
            +L       I+  +G F   Q I + M+Y++GG L  +L+K+ + P  +
Sbjct: 56  LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV 105

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 8e-05
 Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 2/51 (3%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
            L + I+ E     P  + +   +  +   LKK+P +R       A  +++
Sbjct: 212 RLFELILMEEIR-FPRTL-SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 8e-05
 Identities = 11/51 (21%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 67  ILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEH 117
           +L+ + +     +V  + AF ++  + + ++Y++GG L   L +  +  EH
Sbjct: 81  VLEHIRQSP--FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEH 129

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.5 bits (86), Expect = 1e-04
 Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 1/56 (1%)

Query: 14  PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
                  +   + +  P  P  + +   +D + R L K+P +R       A  I +
Sbjct: 237 EKNSQAEISRRILKSEPPYPQEM-SALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (88), Expect = 1e-04
 Identities = 13/90 (14%), Positives = 33/90 (36%), Gaps = 1/90 (1%)

Query: 35  GIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISI 94
           G      +  +   +K   S   + +     +   ++ + +  +++   G       + I
Sbjct: 45  GHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMI 104

Query: 95  CMEYMDGGSLD-LILKKAGKIPEHILGTIT 123
             E+M+ GSLD  + +  G+     L  + 
Sbjct: 105 ITEFMENGSLDSFLRQNDGQFTVIQLVGML 134

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.7 bits (84), Expect = 3e-04
 Identities = 7/56 (12%), Positives = 19/56 (33%), Gaps = 6/56 (10%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHEC 74
           ++++ I  +     P      +    +  C +K+ + R          I+  L + 
Sbjct: 241 DVINAIEQDYRLPPPMDC-PSALHQLMLDCWQKDRNHR-----PKFGQIVNTLDKM 290

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 37.9 bits (87), Expect = 1e-04
 Identities = 9/50 (18%), Positives = 21/50 (42%)

Query: 68  LKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEH 117
           + +L E   ++IV  Y    + + + +  E++D     L+    G +   
Sbjct: 51  ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESV 100

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 1e-04
 Identities = 17/80 (21%), Positives = 26/80 (32%), Gaps = 9/80 (11%)

Query: 45  VDRCLKKNPSERADLKTLSATTILK-----VLHECNFAHIVGFYGAF----ISDQDISIC 95
           V +   K   E+  LK L      +             HIV     +       + + I 
Sbjct: 28  VLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIV 87

Query: 96  MEYMDGGSLDLILKKAGKIP 115
           ME +DGG L   ++  G   
Sbjct: 88  MECLDGGELFSRIQDRGDQA 107

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.002
 Identities = 8/59 (13%), Positives = 22/59 (37%), Gaps = 8/59 (13%)

Query: 14  PMAIFELLDYIVNEPPPKLPAGIF---TDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
            +AI   +   +     + P   +   ++  +  +   LK  P++R     ++ T  + 
Sbjct: 218 GLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQR-----MTITEFMN 271

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 1e-04
 Identities = 7/60 (11%), Positives = 19/60 (31%), Gaps = 6/60 (10%)

Query: 15  MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHEC 74
           +  F++  Y++       P     D   + + +C       R      S + ++  +   
Sbjct: 238 VNTFDITVYLLQGRRLLQPEYC-PDPLYEVMLKCWHPKAEMRP-----SFSELVSRISAI 291

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 2e-04
 Identities = 5/59 (8%), Positives = 19/59 (32%), Gaps = 3/59 (5%)

Query: 68  LKVLHECNFAH--IVGFYGAFISDQDISICMEYMDGGSLDL-ILKKAGKIPEHILGTIT 123
           + +L + +     ++     F       + +E  +        + + G + E +  +  
Sbjct: 58  VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.2 bits (80), Expect = 8e-04
 Identities = 7/48 (14%), Positives = 16/48 (33%), Gaps = 1/48 (2%)

Query: 15  MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL 62
                + +  ++ P   L  G     F  +++ C      ++ D   L
Sbjct: 223 QKYERISEKKMSTPIEVLCKGY-PSEFATYLNFCRSLRFDDKPDYSYL 269

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 35.2 bits (80), Expect = 0.001
 Identities = 9/71 (12%), Positives = 19/71 (26%), Gaps = 2/71 (2%)

Query: 49  LKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLDLIL 108
           +K    +    +    + I K++       I              + ME +     DL  
Sbjct: 37  IKLECVKTKHPQLHIESKIYKMMQGGV--GIPTIRWCGAEGDYNVMVMELLGPSLEDLFN 94

Query: 109 KKAGKIPEHIL 119
             + K     +
Sbjct: 95  FCSRKFSLKTV 105

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (80), Expect = 9e-04
 Identities = 8/67 (11%), Positives = 22/67 (32%), Gaps = 6/67 (8%)

Query: 8   GSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTI 67
           G      ++  E++  I +      P      +    + +C ++  + R          I
Sbjct: 210 GERPYWELSNHEVMKAINDGFRLPTPMDC-PSAIYQLMMQCWQQERARR-----PKFADI 263

Query: 68  LKVLHEC 74
           + +L + 
Sbjct: 264 VSILDKL 270

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (80), Expect = 0.001
 Identities = 10/55 (18%), Positives = 21/55 (38%), Gaps = 5/55 (9%)

Query: 15  MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
               EL+     +   +L A +      D +D+ L  +P++R     + +   L 
Sbjct: 255 YEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQR-----IDSDDALN 304

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (78), Expect = 0.002
 Identities = 8/56 (14%), Positives = 17/56 (30%), Gaps = 6/56 (10%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHEC 74
           E    +      + P    T      +  C    PS+R      + + +++ L   
Sbjct: 245 EFCRRLKEGTRMRAPDYT-TPEMYQTMLDCWHGEPSQR-----PTFSELVEHLGNL 294

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (78), Expect = 0.002
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 12  PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           PR +A+     +  +  P +       +  +D + +CL  NP++R     +SA + L 
Sbjct: 240 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR-----ISAYSALS 292

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (77), Expect = 0.003
 Identities = 5/56 (8%), Positives = 13/56 (23%), Gaps = 6/56 (10%)

Query: 19  ELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILKVLHEC 74
           E+   +        P    T      + +C   +   R          ++    + 
Sbjct: 221 EISSILEKGERLPQPPIC-TIDVYMIMVKCWMIDADSRP-----KFRELIIEFSKM 270

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 34.0 bits (77), Expect = 0.003
 Identities = 8/75 (10%), Positives = 22/75 (29%), Gaps = 9/75 (12%)

Query: 45  VDRCLKKNPSERADLKTLSATTILKVLHECNFA-------HIVGFYGAFISDQD--ISIC 95
           V   +    +E+  +K L      K+  E           +I+              ++ 
Sbjct: 51  VFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 110

Query: 96  MEYMDGGSLDLILKK 110
            E+++      + + 
Sbjct: 111 FEHVNNTDFKQLYQT 125

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (75), Expect = 0.004
 Identities = 8/56 (14%), Positives = 17/56 (30%), Gaps = 5/56 (8%)

Query: 14  PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTLSATTILK 69
           P+ I+E +       P            +D +   L+ + ++R          I  
Sbjct: 243 PIQIYEKIVSGKVRFPSHFS-----SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	125
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.76
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.73
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.73
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.73
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.73
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.72
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.71
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.71
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.7
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.69
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.69
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.69
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.68
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.68
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.67
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.66
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.65
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.65
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.64
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.63
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.62
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.62
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.61
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.61
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.6
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.6
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.6
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.59
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.59
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.58
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.57
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.57
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.57
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.53
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.53
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.52
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.52
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.52
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.51
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.51
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.5
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.49
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.47
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.46
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.45
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.44
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.44
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.43
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.41
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.37
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.37
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.35
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.35
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.34
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.33
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.33
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.31
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.31
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.13
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.09
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.06
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.02
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	96.44
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	80.62

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.76  E-value=6.9e-20  Score=121.96  Aligned_cols=113  Identities=14%  Similarity=0.182  Sum_probs=87.5

Q ss_pred             CCCCCCCCCCCCCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcC
Q psy14717          1 MDSISGSGSNVPRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECN   75 (125)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~   75 (125)
                      |||-+.+-+....+.+.|++.++|        |+|+||.||++.+.     .+++......  .....+.+|+.+++.++
T Consensus         2 ~~p~~p~~~~wei~~~~~~~~~~i--------G~G~fg~Vy~a~~~~~~~~vAvK~i~~~~--~~~~~~~~E~~il~~l~   71 (287)
T d1opja_           2 MDPSSPNYDKWEMERTDITMKHKL--------GGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIK   71 (287)
T ss_dssp             CCTTSTTCCTTBCCGGGEEEEEET--------TTTTTSSEEEEEEGGGTEEEEEEECCTTC--SCHHHHHHHHHHHHHCC
T ss_pred             cCCCCCCCcccEecHHHeEEeeEE--------eeCCCeEEEEEEECCCCeEEEEEEECCcc--chHHHHHHHHHHHHhCC
Confidence            888777666555566788888888        99999999986542     1233222211  12235778999999999


Q ss_pred             CCceeeeeeeEEeCCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         76 FAHIVGFYGAFISDQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        76 h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      ||||+++++++.+++.+||+||||++|+|.+++...  ..+++..+.+++
T Consensus        72 HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~  121 (287)
T d1opja_          72 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMA  121 (287)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHH
T ss_pred             CCCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHH
Confidence            999999999999999999999999999999999875  567887776654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.73  E-value=5.7e-20  Score=123.39  Aligned_cols=101  Identities=19%  Similarity=0.233  Sum_probs=75.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|++.+.|        |+|+||.||++.+.     .+++.............+.+|+.+++.++||||+++++++.++
T Consensus         8 ~d~Y~~~~~l--------G~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~   79 (307)
T d1a06a_           8 RDIYDFRDVL--------GTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG   79 (307)
T ss_dssp             GGTEEEEEES--------BSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred             ccceEEEEEE--------eeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            3567888888        99999999985331     1222111111111222466899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.+||+||||++|+|.+++...+.+++..++.++
T Consensus        80 ~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~  113 (307)
T d1a06a_          80 GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI  113 (307)
T ss_dssp             SEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHH
T ss_pred             CEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHH
Confidence            9999999999999999999988889998887665

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=7.3e-19  Score=117.29  Aligned_cols=99  Identities=15%  Similarity=0.278  Sum_probs=75.7

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ...|+++++|        |+|+||.||++.+.     .+++...... ......+.+|+.+++.++||||+++++++.++
T Consensus        19 ~~~Y~~~~~i--------G~G~fg~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~   89 (293)
T d1yhwa1          19 KKKYTRFEKI--------GQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVG   89 (293)
T ss_dssp             TTTBCSCEEC--------CCSSSCEEEEEEBTTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred             ccccEEEEEE--------ecCcCcEEEEEEECCCCCEEEEEEEeccc-ChHHHHHHHHHHHHHhCCCCCEeeEeEEEEEC
Confidence            3467777777        99999999985432     1111111110 11122467899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.+|||||||++|+|.+++.+ +.+++..++.++
T Consensus        90 ~~~~ivmEy~~gg~L~~~~~~-~~l~~~~~~~i~  122 (293)
T d1yhwa1          90 DELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVC  122 (293)
T ss_dssp             TEEEEEEECCTTCBHHHHHHH-SCCCHHHHHHHH
T ss_pred             CEEEEEEEecCCCcHHHHhhc-cCCCHHHHHHHH
Confidence            999999999999999998877 579998887765

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=5e-19  Score=117.92  Aligned_cols=101  Identities=13%  Similarity=0.158  Sum_probs=78.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-----ccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-----ADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-----~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .+.|++.+.|        |+|+||.||++.+.     .+++......     .......+.+|+.+++.++||||+++++
T Consensus         9 ~d~Y~~~~~l--------G~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~   80 (293)
T d1jksa_           9 DDYYDTGEEL--------GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE   80 (293)
T ss_dssp             GGTEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             ccCEEEeEEE--------ecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEE
Confidence            3568888888        99999999985432     1121111100     0011225678999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++.+++.+|||||||++|+|.+++...+.+++..++.++
T Consensus        81 ~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~  119 (293)
T d1jksa_          81 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFL  119 (293)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             EEEECCEEEEEEEcCCCccccchhccccccchhHHHHHH
Confidence            999999999999999999999999988889998887665

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=6.1e-20  Score=123.90  Aligned_cols=101  Identities=48%  Similarity=0.622  Sum_probs=79.5

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .++|++++.|        |+|+||.||++...     .+++.............+.+|+.+++.++||||++++++|.++
T Consensus         5 ~d~y~~~~~i--------G~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~   76 (322)
T d1s9ja_           5 DDDFEKISEL--------GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD   76 (322)
T ss_dssp             GGGEEEEEEE--------ECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECS
T ss_pred             ccCCEEEEEE--------ecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            4578888888        99999999986432     1222211111112223567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.+|||||||++|+|.+++.+.+.+++..++.++
T Consensus        77 ~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~  110 (322)
T d1s9ja_          77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS  110 (322)
T ss_dssp             SEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHH
T ss_pred             CEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHH
Confidence            9999999999999999999988889998887665

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=6.1e-19  Score=116.03  Aligned_cols=96  Identities=20%  Similarity=0.240  Sum_probs=77.3

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHH------------hhhHHHHHHHHHhcCCCceeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLK------------TLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~------------~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      .++|++++.|        |+|+||.||++..     +...+..+.+            ...+.+|+.+++.++||||+++
T Consensus         5 l~dy~i~~~i--------G~G~fg~Vy~~~~-----~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~   71 (263)
T d2j4za1           5 LEDFEIGRPL--------GKGKFGNVYLARE-----KQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL   71 (263)
T ss_dssp             GGGEEEEEEE--------EECSSEEEEEEEE-----TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             hhHeEEEEEE--------ecCCCcEEEEEEE-----CCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeE
Confidence            4578888888        9999999998532     2222111111            1246689999999999999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++.+++.+|||||||++|+|.+++...+.+++..++.++
T Consensus        72 ~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~  112 (263)
T d2j4za1          72 YGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI  112 (263)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             EEEEEECCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHH
Confidence            99999999999999999999999999988889998887665

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=4e-19  Score=118.32  Aligned_cols=101  Identities=17%  Similarity=0.373  Sum_probs=77.7

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      +.+.|++++.|        |+|+||.||++.+.     .+++..... .......+.+|+.+++.++||||+++++++.+
T Consensus        10 p~d~Y~i~~~i--------G~G~fg~Vy~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~   80 (288)
T d2jfla1          10 PEDFWEIIGEL--------GDGAFGKVYKAQNKETSVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAFYY   80 (288)
T ss_dssp             GGGTEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEECS-SSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             cccCeEEeEEE--------eeCCCcEEEEEEECCCCeEEEEEEECcC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee
Confidence            44578888888        99999999986432     122221111 11122356789999999999999999999999


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ++.+|||||||++|+|.+++.+. +.+++..++.++
T Consensus        81 ~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~  116 (288)
T d2jfla1          81 ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC  116 (288)
T ss_dssp             TTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHH
T ss_pred             CCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHH
Confidence            99999999999999999998764 579998887665

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=7.5e-19  Score=116.96  Aligned_cols=96  Identities=19%  Similarity=0.213  Sum_probs=77.7

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH------------HhhhHHHHHHHHHhcCCCceeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL------------KTLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      -++|++++.|        |+|+||.||++.+     +...+..+.            ....+.+|+.+++.++||||+++
T Consensus         7 p~dy~i~~~l--------G~G~fg~Vy~a~~-----~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l   73 (288)
T d1uu3a_           7 PEDFKFGKIL--------GEGSFSTVVLARE-----LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKL   73 (288)
T ss_dssp             GGGEEEEEEE--------EECSSCEEEEEEE-----TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCE
T ss_pred             CCCCEEEEEE--------eeCCCeEEEEEEE-----CCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEE
Confidence            3578999999        9999999998532     222211111            11246789999999999999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++.+++.+||+||||++|+|.+++...+.+++..++.++
T Consensus        74 ~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~  114 (288)
T d1uu3a_          74 YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYT  114 (288)
T ss_dssp             EEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHH
T ss_pred             EEEEEECCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHH
Confidence            99999999999999999999999999988899998887664

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.2e-19  Score=119.89  Aligned_cols=101  Identities=17%  Similarity=0.153  Sum_probs=77.1

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .++|++++.|        |+|+||.||++.+.     .+++.............+.+|+.+++.++||||+++++++.++
T Consensus         4 ~~dy~~~~~l--------G~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~   75 (271)
T d1nvra_           4 VEDWDLVQTL--------GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG   75 (271)
T ss_dssp             TTEEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred             CcceEEEEEE--------ecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccC
Confidence            4568888888        99999999985432     1222211111111122567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +.+|||||||++|+|.+++...+.+++..++.++
T Consensus        76 ~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~  109 (271)
T d1nvra_          76 NIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF  109 (271)
T ss_dssp             TEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHH
T ss_pred             ceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHH
Confidence            9999999999999999999887889998887665

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.69  E-value=1.2e-18  Score=115.35  Aligned_cols=100  Identities=12%  Similarity=0.109  Sum_probs=76.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCC---ccccH-----HhhhHHHHHHHHHhcC-CCceee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPS---ERADL-----KTLSATTILKVLHECN-FAHIVG   81 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~---~~~~~-----~~~~~~~e~~~~~~~~-h~~iv~   81 (125)
                      +.|++.+.|        |+|+||.||++.+.     .|++....   .....     ....+.+|+.+++.+. ||||++
T Consensus         3 ~~y~~~~~i--------G~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~   74 (277)
T d1phka_           3 ENYEPKEIL--------GRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQ   74 (277)
T ss_dssp             TTEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCC
T ss_pred             ccCEEceEE--------ecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Confidence            467777888        99999999985431     11221111   00010     1124678999999986 999999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++++.+++.+||+||||++|+|.++|+.++.+++..++.++
T Consensus        75 ~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~  116 (277)
T d1phka_          75 LKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM  116 (277)
T ss_dssp             EEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             EEeecccCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHH
Confidence            999999999999999999999999999988899999988775

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=9.5e-19  Score=118.01  Aligned_cols=99  Identities=11%  Similarity=0.144  Sum_probs=77.0

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|++++.|        |+|+||.||++.+.     .+++.....  ......+.+|+.+++.++||||++++++|.++
T Consensus         4 ~~rY~i~~~l--------G~G~fg~Vy~~~~~~~~~~~AiK~i~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~   73 (321)
T d1tkia_           4 YEKYMIAEDL--------GRGEFGIVHRCVETSSKKTYMAKFVKVK--GTDQVLVKKEISILNIARHRNILHLHESFESM   73 (321)
T ss_dssp             TTTEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEECCC--THHHHHHHHHHHHHHHSCCTTBCCEEEEEEET
T ss_pred             ccceEEEEEE--------ecCCCeEEEEEEECCCCcEEEEEEEcCC--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            3567888888        99999999985432     122211111  12233467899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcC-CCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAG-KIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~-~l~~~~~~~~~  123 (125)
                      +.+|||||||++|+|.++++..+ .+++..++.++
T Consensus        74 ~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~  108 (321)
T d1tkia_          74 EELVMIFEFISGLDIFERINTSAFELNEREIVSYV  108 (321)
T ss_dssp             TEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHH
T ss_pred             CEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHH
Confidence            99999999999999999998764 69998887664

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.1e-18  Score=117.02  Aligned_cols=96  Identities=20%  Similarity=0.257  Sum_probs=78.1

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH------------HhhhHHHHHHHHHhcCCCceeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL------------KTLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------------~~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      +++|++++.|        |+|+||.||++..     +...+..+.            ....+.+|+.+++.++||||+++
T Consensus         4 l~dy~~~~~l--------G~G~fg~V~~~~~-----~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l   70 (337)
T d1o6la_           4 MNDFDYLKLL--------GKGTFGKVILVRE-----KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL   70 (337)
T ss_dssp             GGGEEEEEEE--------EECSSEEEEEEEE-----TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCE
T ss_pred             hHhcEEEEEE--------ecCcCeEEEEEEE-----CCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence            4678888888        9999999998432     222222211            11246689999999999999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++.+++.+|+|||||++|+|.+++++.+.+++..++.++
T Consensus        71 ~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~  111 (337)
T d1o6la_          71 KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG  111 (337)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHH
T ss_pred             EeeeccccccccceeccCCCchhhhhhcccCCcHHHHHHHH
Confidence            99999999999999999999999999998899999888765

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.68  E-value=1.4e-18  Score=116.70  Aligned_cols=102  Identities=19%  Similarity=0.266  Sum_probs=78.6

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc--ccHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER--ADLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      +...|+.+++|        |+|+||.||++.+.     .+++......  .......+.+|+.+++.++||||+++++++
T Consensus        13 p~~~y~~l~~l--------G~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~   84 (309)
T d1u5ra_          13 PEKLFSDLREI--------GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY   84 (309)
T ss_dssp             HHHHEEEEEEE--------EECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred             cHHhcEeeEEE--------ecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEE
Confidence            34568888888        99999999986432     1222211111  111223577899999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .+++.+||+||||.+|+|..++...+.+++..++.++
T Consensus        85 ~~~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~  121 (309)
T d1u5ra_          85 LREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVT  121 (309)
T ss_dssp             EETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHH
T ss_pred             EECCEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHH
Confidence            9999999999999999999888887889998887765

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.7e-18  Score=114.20  Aligned_cols=101  Identities=20%  Similarity=0.306  Sum_probs=74.6

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      .++|++++.|        |+|+||.||++...     .+++...... .......+.+|+.+++.++||||+++++++.+
T Consensus         3 ~edy~~~~~i--------G~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~   74 (269)
T d2java1           3 AEDYEVLYTI--------GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID   74 (269)
T ss_dssp             GGGEEEEEEE--------EECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC
T ss_pred             chhCEEeEEE--------ecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEe
Confidence            4678888999        99999999986432     1222211111 11223356789999999999999999999965


Q ss_pred             --CCeEEEEEEecCCCCHHHHHHHc----CCCCHHHHhhhh
Q psy14717         89 --DQDISICMEYMDGGSLDLILKKA----GKIPEHILGTIT  123 (125)
Q Consensus        89 --~~~~~iv~e~~~~GsL~~~l~~~----~~l~~~~~~~~~  123 (125)
                        ++.+||+||||++|+|.+++.+.    ..+++..++.++
T Consensus        75 ~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~  115 (269)
T d2java1          75 RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM  115 (269)
T ss_dssp             ----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred             CCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHH
Confidence              45699999999999999998753    579998887665

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.67  E-value=1.2e-18  Score=116.48  Aligned_cols=92  Identities=17%  Similarity=0.290  Sum_probs=70.2

Q ss_pred             CCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      ||+|+||.||++.+.        .+++.............+.+|+.+++.++||||+++++++..++.++++||||++|+
T Consensus        34 lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~  113 (299)
T d1jpaa_          34 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS  113 (299)
T ss_dssp             EEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEE
T ss_pred             EeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCc
Confidence            399999999986431        112222221122223357899999999999999999999999999999999999999


Q ss_pred             HHHHHHHc-CCCCHHHHhhhh
Q psy14717        104 LDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~-~~l~~~~~~~~~  123 (125)
                      |.+++... +.+++..+..++
T Consensus       114 L~~~~~~~~~~l~~~~~~~i~  134 (299)
T d1jpaa_         114 LDSFLRQNDGQFTVIQLVGML  134 (299)
T ss_dssp             HHHHHHTTTTCSCHHHHHHHH
T ss_pred             ceeeeccccCCCCHHHHHHHH
Confidence            99998875 568888776654

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.66  E-value=2.9e-18  Score=116.89  Aligned_cols=100  Identities=15%  Similarity=0.193  Sum_probs=77.2

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      .+.|++++.|        |+|+||.||++...     .|++..... .......+.+|+.+++.++||||+++++++.++
T Consensus        25 l~~Y~i~~~l--------G~G~fg~Vy~~~~~~~g~~vAvK~i~~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~   95 (350)
T d1koaa2          25 LDHYDIHEEL--------GTGAFGVVHRVTERATGNNFAAKFVMTP-HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD   95 (350)
T ss_dssp             GGTEEEEEEE--------EEETTEEEEEEEETTTTEEEEEEEECCC-SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEET
T ss_pred             ccCeEEEEEE--------ecCcCeEEEEEEECCCCCEEEEEEEccc-chhhHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            4568888888        99999999985432     122222111 112223567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHH-cCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKK-AGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~-~~~l~~~~~~~~~  123 (125)
                      +.+|||||||++|+|.+++.+ .+.+++..++.++
T Consensus        96 ~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~  130 (350)
T d1koaa2          96 NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYM  130 (350)
T ss_dssp             TEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHH
T ss_pred             CEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHH
Confidence            999999999999999999964 4679998887765

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.65  E-value=2.5e-17  Score=108.62  Aligned_cols=91  Identities=18%  Similarity=0.257  Sum_probs=68.7

Q ss_pred             CCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe----CCeEEEEEEecCCC
Q psy14717         33 PAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFIS----DQDISICMEYMDGG  102 (125)
Q Consensus        33 g~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~----~~~~~iv~e~~~~G  102 (125)
                      |+|+||.||++.+.     .+++...... .......+.+|+.+++.++||||+++++++.+    +..+||+||||++|
T Consensus        18 G~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g   97 (270)
T d1t4ha_          18 GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSG   97 (270)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSC
T ss_pred             ecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCC
Confidence            99999999986432     1111111111 11222356789999999999999999999876    34689999999999


Q ss_pred             CHHHHHHHcCCCCHHHHhhhh
Q psy14717        103 SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +|.+++++...+++..++.++
T Consensus        98 ~L~~~l~~~~~~~~~~~~~~~  118 (270)
T d1t4ha_          98 TLKTYLKRFKVMKIKVLRSWC  118 (270)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHH
T ss_pred             cHHHHHhccccccHHHHHHHH
Confidence            999999988889998877654

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.65  E-value=4.3e-18  Score=116.08  Aligned_cols=99  Identities=14%  Similarity=0.238  Sum_probs=76.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      +.|++++.|        |+|+||.||++...     .+++..... .......+.+|+.+++.++||||++++++|.+++
T Consensus        29 d~Y~i~~~l--------G~G~fg~V~~a~~~~~~~~vAiK~i~~~-~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~   99 (352)
T d1koba_          29 DYYDILEEL--------GSGAFGVVHRCVEKATGRVFVAKFINTP-YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY   99 (352)
T ss_dssp             GTEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEECC-SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS
T ss_pred             cceEEEEEE--------ecCCCeEEEEEEECCCCCEEEEEEECCc-chhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            468888888        99999999985431     112211111 1122335678999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .+|||||||++|+|.+++... ..+++..++.++
T Consensus       100 ~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~  133 (352)
T d1koba_         100 EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM  133 (352)
T ss_dssp             EEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHH
T ss_pred             EEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHH
Confidence            999999999999999988765 469998887765

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=1.5e-17  Score=112.12  Aligned_cols=95  Identities=18%  Similarity=0.257  Sum_probs=73.3

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHH------------hhhHHHHHHHHH-hcCCCceeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLK------------TLSATTILKVLH-ECNFAHIVGF   82 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~------------~~~~~~e~~~~~-~~~h~~iv~~   82 (125)
                      ++|++++.|        |+|+||.||++.+     +...+..+.+            .....+|..++. .++||||+++
T Consensus         2 ddy~i~~~i--------G~G~fg~Vy~~~~-----~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~   68 (320)
T d1xjda_           2 EDFILHKML--------GKGSFGKVFLAEF-----KKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM   68 (320)
T ss_dssp             TTEEEEEEE--------EECSSSEEEEEEE-----TTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred             CCeEEeeEE--------ecCCCcEEEEEEE-----CCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            457777888        9999999998533     2222222111            113445666655 5899999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++.+++.+|||||||++|+|.++++....+++..++.++
T Consensus        69 ~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~  109 (320)
T d1xjda_          69 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYA  109 (320)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHH
T ss_pred             EEEEccCCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHH
Confidence            99999999999999999999999999998899998887765

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=6.3e-18  Score=113.31  Aligned_cols=91  Identities=19%  Similarity=0.234  Sum_probs=68.3

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeeeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGFYG   84 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~~~   84 (125)
                      .+.+.|++.+.|        |+|+||.||++.+.       .+++.............+.+|+.+++.+ +||||+++++
T Consensus         7 i~~~~~~~~~~i--------G~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~   78 (309)
T d1fvra_           7 LDWNDIKFQDVI--------GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLG   78 (309)
T ss_dssp             CCGGGCEEEEEE--------ECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEE
T ss_pred             cCHHHcEEEEEE--------eeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEE
Confidence            566788888888        99999999986542       1111111111111223577999999998 7999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++..++.+|||||||++|+|.++|...
T Consensus        79 ~~~~~~~~~iV~ey~~~g~L~~~l~~~  105 (309)
T d1fvra_          79 ACEHRGYLYLAIEYAPHGNLLDFLRKS  105 (309)
T ss_dssp             EEEETTEEEEEECCCTTCBHHHHHHTT
T ss_pred             EEecCCeeEEEEEecCCCcHHHHHhhc
Confidence            999999999999999999999999754

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.62  E-value=3e-17  Score=110.38  Aligned_cols=96  Identities=20%  Similarity=0.337  Sum_probs=76.4

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHH------------hhhHHHHHHHHHhcCCCceeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLK------------TLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~------------~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      .++|++++.|        |+|+||.||++.+     +...+..+.+            ...+.+|+.+++.++||||+++
T Consensus         3 l~dy~i~~~l--------G~G~fg~Vy~a~~-----~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~   69 (316)
T d1fota_           3 LQDFQILRTL--------GTGSFGRVHLIRS-----RHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRM   69 (316)
T ss_dssp             GGGEEEEEEE--------EECSSCEEEEEEE-----TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCE
T ss_pred             hhHeEEEEEE--------ecCcCcEEEEEEE-----CCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhhe
Confidence            3568888888        9999999998532     2222111111            1246689999999999999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++.+++.+|+|||||.||+|..++.....+++..++.++
T Consensus        70 ~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~  110 (316)
T d1fota_          70 WGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYA  110 (316)
T ss_dssp             EEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHH
T ss_pred             eeeEeeCCeeeeEeeecCCccccccccccccccccHHHHHH
Confidence            99999999999999999999999999998888988876654

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=1.2e-17  Score=109.71  Aligned_cols=97  Identities=16%  Similarity=0.255  Sum_probs=73.9

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeE
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDI   92 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~   92 (125)
                      .|++++.|        |+|+||.||++...    .++++....  ......+.+|+.+++.++||||+++++++..++.+
T Consensus         6 ~~~~~~~i--------G~G~fg~Vy~~~~~~~~~vAvK~i~~~--~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~   75 (263)
T d1sm2a_           6 ELTFVQEI--------GSGQFGLVHLGYWLNKDKVAIKTIREG--AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI   75 (263)
T ss_dssp             CEEEEEEE--------ECCSSCCEEEEEETTTEEEEEEECCSS--SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HcEEEEEE--------eeCCCeEEEEEEECCCCEEEEEEECCC--cCcHHHHHHHHHHHHhcCCCCcccccceeccCCce
Confidence            46677778        99999999986431    122222211  11223578999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         93 SICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        93 ~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +++||||++|+|.+++... ..+++..+..++
T Consensus        76 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~  107 (263)
T d1sm2a_          76 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMC  107 (263)
T ss_dssp             EEEEECCTTCBHHHHHHTTTTCCCHHHHHHHH
T ss_pred             EEEEEecCCCcHHHHhhccccCCCHHHHHHHH
Confidence            9999999999999998765 557777665554

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=3.6e-17  Score=108.18  Aligned_cols=91  Identities=15%  Similarity=0.184  Sum_probs=67.9

Q ss_pred             CCCCCchhHHHHHHH-------HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCC
Q psy14717         32 LPAGIFTDSFRDFVD-------RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGS  103 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-------~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~Gs  103 (125)
                      ||+|+||.||++.+.       .+++...... .......+.+|+.+++.++||||+++++++..+ ..+||||||++|+
T Consensus        15 iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~-~~~lvmE~~~~g~   93 (277)
T d1xbba_          15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGP   93 (277)
T ss_dssp             EEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS-SEEEEEECCTTEE
T ss_pred             cccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccC-CEEEEEEcCCCCc
Confidence            499999999986431       1222211111 111223577999999999999999999998654 5789999999999


Q ss_pred             HHHHHHHcCCCCHHHHhhhh
Q psy14717        104 LDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~~~l~~~~~~~~~  123 (125)
                      |.+++++...+++..+..++
T Consensus        94 L~~~l~~~~~l~~~~~~~i~  113 (277)
T d1xbba_          94 LNKYLQQNRHVKDKNIIELV  113 (277)
T ss_dssp             HHHHHHHCTTCCHHHHHHHH
T ss_pred             HHHHHhhccCCCHHHHHHHH
Confidence            99999998889998877665

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.61  E-value=7.5e-17  Score=109.78  Aligned_cols=98  Identities=18%  Similarity=0.299  Sum_probs=78.9

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHH------------hhhHHHHHHHHHhcCCCcee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLK------------TLSATTILKVLHECNFAHIV   80 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~------------~~~~~~e~~~~~~~~h~~iv   80 (125)
                      ..++.|++++.|        |+|+||.||++.+     +...+..+.+            ...+.+|+.+++.++||||+
T Consensus        38 ~~ld~y~i~~~l--------G~G~fg~Vy~a~~-----~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv  104 (350)
T d1rdqe_          38 AQLDQFDRIKTL--------GTGSFGRVMLVKH-----KESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLV  104 (350)
T ss_dssp             CCGGGEEEEEEE--------EECSSCEEEEEEE-----TTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBC
T ss_pred             CCccCeEEEEEe--------ecCcCcEEEEEEE-----CCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEe
Confidence            346788888888        9999999998532     2222111111            11466899999999999999


Q ss_pred             eeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         81 GFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        81 ~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++++.+...++++|||+.+|+|..++.+.+.+++..++.++
T Consensus       105 ~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~  147 (350)
T d1rdqe_         105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYA  147 (350)
T ss_dssp             CEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHH
T ss_pred             ecccccccccccccccccccccchhhhHhhcCCCCHHHHHHHH
Confidence            9999999999999999999999999999988899999887765

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=3.6e-17  Score=108.60  Aligned_cols=90  Identities=18%  Similarity=0.234  Sum_probs=66.8

Q ss_pred             CCCCchhHHHHHHH-------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCHH
Q psy14717         33 PAGIFTDSFRDFVD-------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSLD  105 (125)
Q Consensus        33 g~g~fg~v~~~~~~-------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL~  105 (125)
                      |+|+||.||++.+.       .+++.............+.+|+.+++.++||||+++++++.+ +.+|||||||++|+|.
T Consensus        18 G~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~   96 (285)
T d1u59a_          18 GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLH   96 (285)
T ss_dssp             ECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHH
T ss_pred             ecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCcHH
Confidence            99999999986321       122221111112223357799999999999999999998865 4689999999999999


Q ss_pred             HHHHHc-CCCCHHHHhhhh
Q psy14717        106 LILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       106 ~~l~~~-~~l~~~~~~~~~  123 (125)
                      +++... ..+++..+..++
T Consensus        97 ~~l~~~~~~l~~~~~~~i~  115 (285)
T d1u59a_          97 KFLVGKREEIPVSNVAELL  115 (285)
T ss_dssp             HHHTTCTTTSCHHHHHHHH
T ss_pred             HHhhccccCCCHHHHHHHH
Confidence            998654 578988877665

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=1.1e-17  Score=112.89  Aligned_cols=90  Identities=19%  Similarity=0.208  Sum_probs=66.0

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGF   82 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~   82 (125)
                      +.+.|++.+.|        |+|+||.||++.+.          .+++.............+.+|+.++..+ +|||||++
T Consensus        35 ~~~~~~l~~~l--------G~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l  106 (325)
T d1rjba_          35 PRENLEFGKVL--------GSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNL  106 (325)
T ss_dssp             CGGGEEEEEEE--------EECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CHHHeEEeeEE--------eeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEE
Confidence            34567777778        99999999986431          1111111111112223567899999987 89999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++++.+++.+|++||||++|+|.++|+..
T Consensus       107 ~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~  135 (325)
T d1rjba_         107 LGACTLSGPIYLIFEYCCYGDLLNYLRSK  135 (325)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHTT
T ss_pred             EEEEeeCCeEEEEEEcCCCCcHHHHHHhc
Confidence            99999999999999999999999999864

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.60  E-value=3.5e-17  Score=108.05  Aligned_cols=101  Identities=19%  Similarity=0.112  Sum_probs=76.7

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc--cHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA--DLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~--~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .++|++.+.|        |+|+||.||++.+.     .++|.......  ......+.+|+.+++.++||||+++++++.
T Consensus         6 ~drY~i~~~l--------G~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~   77 (277)
T d1o6ya_           6 SDRYELGEIL--------GFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGE   77 (277)
T ss_dssp             TTTEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred             cceeEEeEEE--------eeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceee
Confidence            4568888888        99999999986432     12222111111  112235778999999999999999999998


Q ss_pred             eCC----eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         88 SDQ----DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~----~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..+    .+|||||||++|+|.+++...+.+++..++.++
T Consensus        78 ~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~  117 (277)
T d1o6ya_          78 AETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVI  117 (277)
T ss_dssp             EECSSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHH
T ss_pred             eccCCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHH
Confidence            754    389999999999999999988899998877665

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3.7e-17  Score=107.76  Aligned_cols=102  Identities=19%  Similarity=0.133  Sum_probs=75.3

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYG   84 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~   84 (125)
                      .+.+.|++.+.|        |+|+||.||++.+.        .+++.............+.+|+.+++.++||||+++++
T Consensus         4 i~~~~~~l~~~i--------G~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~   75 (273)
T d1mp8a_           4 IQRERIELGRCI--------GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG   75 (273)
T ss_dssp             CCGGGEEEEEEE--------EECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cCHHHeEEEEEE--------eeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence            345678888888        99999999986431        11222111112222335779999999999999999999


Q ss_pred             eEEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         85 AFISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ++. .+.+|++||||++|+|.+++... ..+++..+..++
T Consensus        76 ~~~-~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~  114 (273)
T d1mp8a_          76 VIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYA  114 (273)
T ss_dssp             EEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHH
T ss_pred             EEe-cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHH
Confidence            885 56789999999999999988764 568887776654

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.59  E-value=7.5e-17  Score=110.29  Aligned_cols=96  Identities=21%  Similarity=0.277  Sum_probs=72.9

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHh------------hhHHH---HHHHHHhcCCCce
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKT------------LSATT---ILKVLHECNFAHI   79 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~------------~~~~~---e~~~~~~~~h~~i   79 (125)
                      +++|++++.|        |+|+||.||++..     +...+..+.+.            ....+   ++.+++.++||||
T Consensus         3 lddy~i~~~l--------G~G~fg~Vy~~~~-----~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnI   69 (364)
T d1omwa3           3 MNDFSVHRII--------GRGGFGEVYGCRK-----ADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFI   69 (364)
T ss_dssp             STTEEEEEEE--------EECSSCEEEEEEE-----TTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTB
T ss_pred             HHhCeeeeEE--------ecCCCeEEEEEEE-----CCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcE
Confidence            4578888888        9999999998432     22222222110            11223   3566667789999


Q ss_pred             eeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         80 VGFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        80 v~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++++++.+++.+|||||||++|+|.++|.+...+++..++.++
T Consensus        70 v~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~  113 (364)
T d1omwa3          70 VCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYA  113 (364)
T ss_dssp             CCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHH
T ss_pred             EEEEEEEEECCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHH
Confidence            99999999999999999999999999999988889998887664

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=3e-17  Score=110.09  Aligned_cols=91  Identities=21%  Similarity=0.155  Sum_probs=69.7

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVG   81 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~   81 (125)
                      .+.+.|++.+.|        |+|+||.||++.+.          .+++.............+.+|+.+++.+ +||||++
T Consensus        20 ~~~~~~~l~~~i--------G~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~   91 (311)
T d1t46a_          20 FPRNRLSFGKTL--------GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVN   91 (311)
T ss_dssp             CCGGGEEEEEEE--------EECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCHHHeEEeeEE--------eecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEE
Confidence            445788888888        99999999986421          1222222222222333577899999998 7999999


Q ss_pred             eeeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         82 FYGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        82 ~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      +++++..++.++++||||++|+|.++++..
T Consensus        92 ~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~  121 (311)
T d1t46a_          92 LLGACTIGGPTLVITEYCCYGDLLNFLRRK  121 (311)
T ss_dssp             EEEEECSSSSCEEEEECCTTEEHHHHHHHT
T ss_pred             EEEEEeeCCEEEEEEEcCCCCCHHHHHHhc
Confidence            999999999999999999999999999875

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=4.7e-17  Score=107.59  Aligned_cols=101  Identities=18%  Similarity=0.167  Sum_probs=73.8

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      +.+.|++.+.|        |+|+||.||++...  .+++...... .......+.+|+.+++.++||||+++++++. .+
T Consensus         6 ~~~~~~~~~~l--------G~G~fg~Vy~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~   76 (276)
T d1uwha_           6 PDGQITVGQRI--------GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-AP   76 (276)
T ss_dssp             CTTCCCCCSEE--------EECSSCEEEEEESSSEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SS
T ss_pred             ccccEEEEEEE--------eeCCCcEEEEEEECCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-cc
Confidence            34566777777        99999999986432  1233222211 1122335778999999999999999998764 45


Q ss_pred             eEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .++|+||||++|+|.+++... ..+++..+..++
T Consensus        77 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~  110 (276)
T d1uwha_          77 QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIA  110 (276)
T ss_dssp             SCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHH
T ss_pred             EEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHH
Confidence            689999999999999999765 568888776654

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2.7e-17  Score=107.83  Aligned_cols=97  Identities=19%  Similarity=0.188  Sum_probs=73.3

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeE
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQDI   92 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~   92 (125)
                      +|+++++|        |+|+||.||++.+.    .+++.....  ......+.+|+.+++.++||||+++++++.+++.+
T Consensus         5 ~~~~~~~i--------G~G~fg~Vy~~~~~~~~~vAvK~l~~~--~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~   74 (258)
T d1k2pa_           5 DLTFLKEL--------GTGQFGVVKYGKWRGQYDVAIKMIKEG--SMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPI   74 (258)
T ss_dssp             CCCCCCCC--------CEETTEEEEEEEETTTEEEEEEEEESS--SSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSE
T ss_pred             HCEEeEEE--------ecCCCeEEEEEEECCCCEEEEEEECcC--cCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCce
Confidence            45566667        99999999986532    112211111  11223577999999999999999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         93 SICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        93 ~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +++|||+.+|+|..++... ..++++.+.+++
T Consensus        75 ~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~  106 (258)
T d1k2pa_          75 FIITEYMANGCLLNYLREMRHRFQTQQLLEMC  106 (258)
T ss_dssp             EEEEECCTTEEHHHHHHSGGGCCCHHHHHHHH
T ss_pred             EEEEEccCCCcHHHhhhccccCCcHHHHHHHH
Confidence            9999999999999997754 568887776665

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=9.1e-17  Score=108.79  Aligned_cols=98  Identities=19%  Similarity=0.250  Sum_probs=73.3

Q ss_pred             CCchHHHHHHH-hhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHH----hhhHHHHHHHHHh-cCCCceeeeeeeE
Q psy14717         13 RPMAIFELLDY-IVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLK----TLSATTILKVLHE-CNFAHIVGFYGAF   86 (125)
Q Consensus        13 ~~~~~~~~~~~-i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~----~~~~~~e~~~~~~-~~h~~iv~~~~~~   86 (125)
                      ...+.|+++.+ |        |+|+||.||++     ..+...+..+.+    .....+|+.++.+ .+||||++++++|
T Consensus         8 ~i~~~y~i~~~~l--------G~G~fg~Vy~a-----~~~~~~~~vAiK~i~~~~~~~~E~~~~~~~~~hpnIv~l~~~~   74 (335)
T d2ozaa1           8 AIIDDYKVTSQVL--------GLGINGKVLQI-----FNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVY   74 (335)
T ss_dssp             CGGGTEEEEEEEE--------EECSSCEEEEE-----EETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred             CcccCEEEeeEEe--------eeccCeEEEEE-----EECCCCCEEEEEEECCcHHHHHHHHHHHHhcCCCCCCeEEEEE
Confidence            34567777754 7        99999999994     333333333332    2245689988765 5899999999999


Q ss_pred             Ee----CCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         87 IS----DQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        87 ~~----~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      .+    ...+||+||||+||+|.++|++.  ..+++..++.++
T Consensus        75 ~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~  117 (335)
T d2ozaa1          75 ENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM  117 (335)
T ss_dssp             EEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHH
T ss_pred             eecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHH
Confidence            76    45699999999999999999875  468998887765

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=9.3e-17  Score=105.87  Aligned_cols=100  Identities=20%  Similarity=0.311  Sum_probs=73.2

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      .+.+.|++++.|        |+|+||.||++...    .+++.....  ......+.+|+.+++.++||||+++++++. 
T Consensus        10 i~~~~~~~~~~i--------G~G~fg~Vy~~~~~~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~-   78 (272)
T d1qpca_          10 VPRETLKLVERL--------GAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDAFLAEANLMKQLQHQRLVRLYAVVT-   78 (272)
T ss_dssp             CCGGGEEEEEEE--------EEETTEEEEEEEETTTEEEEEEEECTT--SSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-
T ss_pred             cCHHHeEEeEEE--------ecCCCcEEEEEEECCCCEEEEEEEccC--cCCHHHHHHHHHHHHhCCCCCEeEEEeeec-
Confidence            456788888888        99999999986532    112211111  112235789999999999999999999775 


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      .+.+|||||||++|+|.+++...  ..+++..+..++
T Consensus        79 ~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~  115 (272)
T d1qpca_          79 QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA  115 (272)
T ss_dssp             SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHH
T ss_pred             cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHH
Confidence            45679999999999999977543  358887766554

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=4.3e-16  Score=103.76  Aligned_cols=99  Identities=16%  Similarity=0.256  Sum_probs=71.0

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.|+++++|        |+|+||.||++.+.     .|++........ .....+.+|+.+++.++||||+++++++.++
T Consensus         2 d~Y~~~~~l--------G~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~   73 (298)
T d1gz8a_           2 ENFQKVEKI--------GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE   73 (298)
T ss_dssp             TTEEEEEEE--------EECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred             CCCEeccEE--------ecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccc
Confidence            467788888        99999999986432     122221111111 1123567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHH--cCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKK--AGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~--~~~l~~~~~~~~~  123 (125)
                      +.+|++||||.++ +..++..  ...+++..++.++
T Consensus        74 ~~~~iv~e~~~~~-~~~~~~~~~~~~l~e~~~~~~~  108 (298)
T d1gz8a_          74 NKLYLVFEFLHQD-LKKFMDASALTGIPLPLIKSYL  108 (298)
T ss_dssp             TEEEEEEECCSEE-HHHHHHHTTTTCCCHHHHHHHH
T ss_pred             cceeEEEeecCCc-hhhhhhhhcccCCCHHHHHHHH
Confidence            9999999999875 4444443  3569998887765

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4e-16  Score=104.02  Aligned_cols=103  Identities=16%  Similarity=0.184  Sum_probs=71.1

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH------------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCce
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD------------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHI   79 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~i   79 (125)
                      .+.+.|++.+.|        |+|+||.||++...            .++++............+.+|...+..+ +||||
T Consensus        10 i~~~~~~l~~~i--------G~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnI   81 (299)
T d1fgka_          10 LPRDRLVLGKPL--------GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNI   81 (299)
T ss_dssp             CCGGGEEEEEEC--------C-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTB
T ss_pred             ccHHHeEEeeEE--------eecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeE
Confidence            445788888888        99999999985321            1222222222222233567788888886 89999


Q ss_pred             eeeeeeEEeCCeEEEEEEecCCCCHHHHHHHcC----------------CCCHHHHhhhh
Q psy14717         80 VGFYGAFISDQDISICMEYMDGGSLDLILKKAG----------------KIPEHILGTIT  123 (125)
Q Consensus        80 v~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~----------------~l~~~~~~~~~  123 (125)
                      +++++++.++..+++|||||.+|+|.++|+...                .+++..+..++
T Consensus        82 v~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  141 (299)
T d1fgka_          82 INLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCA  141 (299)
T ss_dssp             CCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHH
T ss_pred             EecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHH
Confidence            999999999999999999999999999998652                36777666554

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.52  E-value=3.6e-16  Score=104.28  Aligned_cols=91  Identities=20%  Similarity=0.244  Sum_probs=71.1

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGF   82 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~   82 (125)
                      .+.+.|++++.|        |+|+||.||++...          .++++............+.+|+.+++.++|||++++
T Consensus        10 ~p~~~~~~~~~l--------G~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~   81 (301)
T d1lufa_          10 YPRNNIEYVRDI--------GEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKL   81 (301)
T ss_dssp             CCGGGCEEEEEE--------EECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCE
T ss_pred             CCHHHcEEeEEE--------eeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccc
Confidence            346688888999        99999999986421          123332222222223357899999999999999999


Q ss_pred             eeeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         83 YGAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        83 ~~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++++...+.++++|||+.+|+|.+++...
T Consensus        82 ~~~~~~~~~~~~v~e~~~~g~L~~~l~~~  110 (301)
T d1lufa_          82 LGVCAVGKPMCLLFEYMAYGDLNEFLRSM  110 (301)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHT
T ss_pred             eeeeccCCceEEEEEecCCCcHHHHHHhc
Confidence            99999999999999999999999999764

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4.1e-17  Score=107.14  Aligned_cols=99  Identities=20%  Similarity=0.236  Sum_probs=71.5

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe-C
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS-D   89 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~-~   89 (125)
                      ..+.|++.+.|        |+|+||.||++...   .+++.....   .....+.+|+.+++.++||||+++++++.. +
T Consensus         5 ~~~~~~~~~~l--------G~G~fg~Vy~~~~~~~~vAvK~i~~~---~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~   73 (262)
T d1byga_           5 NMKELKLLQTI--------GKGEFGDVMLGDYRGNKVAVKCIKND---ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEK   73 (262)
T ss_dssp             CGGGEEEEEEE--------EECSSCEEEEEEETTEEEEEEECCCC---C--HHHHHTHHHHTTCCCTTBCCEEEEECCC-
T ss_pred             CHHHeEEeEEE--------ecCCCeEEEEEEECCeEEEEEEECcH---HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecC
Confidence            34567777778        99999999986432   122222111   112357789999999999999999998865 4


Q ss_pred             CeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                      +.+|+||||+++|+|.+++...  ..+++..+..++
T Consensus        74 ~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~  109 (262)
T d1byga_          74 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS  109 (262)
T ss_dssp             -CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHH
T ss_pred             CcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHH
Confidence            5689999999999999999764  347887766654

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=2.2e-16  Score=104.55  Aligned_cols=99  Identities=17%  Similarity=0.279  Sum_probs=73.8

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      .|+..+.|        |+|+||.||++.+.         .+++.............+.+|+.+++.++||||+++++++.
T Consensus         8 ~~~~~~~i--------G~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~   79 (283)
T d1mqba_           8 CVTRQKVI--------GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS   79 (283)
T ss_dssp             TEEEEEEE--------EECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             HeEeeeEE--------eeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEe
Confidence            35555667        99999999986421         12222211112222335779999999999999999999999


Q ss_pred             eCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         88 SDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ..+.++++||||.+|++.+++... ..+++..+..++
T Consensus        80 ~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~  116 (283)
T d1mqba_          80 KYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML  116 (283)
T ss_dssp             SSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHH
T ss_pred             cCCceEEEEEecccCcchhhhhcccccccHHHHHHHH
Confidence            999999999999999999988765 568887766654

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=5.1e-16  Score=102.99  Aligned_cols=100  Identities=19%  Similarity=0.206  Sum_probs=75.2

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS   88 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~   88 (125)
                      .+.+.|++.+.|        |+|+||.||++...    .+++.....  ......+.+|+.+++.++|+||+++++++..
T Consensus        14 i~~~~~~i~~~i--------G~G~fg~Vy~~~~~~~~~vAiK~l~~~--~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~   83 (285)
T d1fmka3          14 IPRESLRLEVKL--------GQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE   83 (285)
T ss_dssp             CCGGGEEEEEEE--------EECSSCEEEEEEETTTEEEEEEECCTT--SSCHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             cCHHHEEEeeEE--------eeCCCeEEEEEEECCCCEEEEEEECcc--cCCHHHHHHHHHHHHhcccCCEeEEEEEEec
Confidence            445688888888        99999999986532    122222111  1122357799999999999999999998854


Q ss_pred             CCeEEEEEEecCCCCHHHHHHHc--CCCCHHHHhhhh
Q psy14717         89 DQDISICMEYMDGGSLDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        89 ~~~~~iv~e~~~~GsL~~~l~~~--~~l~~~~~~~~~  123 (125)
                       +.+|+|||||++|+|..++...  ..+++..+..++
T Consensus        84 -~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~  119 (285)
T d1fmka3          84 -EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMA  119 (285)
T ss_dssp             -SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHH
T ss_pred             -CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHH
Confidence             5689999999999999988653  578998877665

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=2.6e-16  Score=104.75  Aligned_cols=92  Identities=18%  Similarity=0.261  Sum_probs=67.0

Q ss_pred             CCCCCchhHHHHHHH-----HHhhcCCCcccc-H---HhhhHHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCC
Q psy14717         32 LPAGIFTDSFRDFVD-----RCLKKNPSERAD-L---KTLSATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGG  102 (125)
Q Consensus        32 lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-~---~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~G  102 (125)
                      ||+|+||.||++.+.     .|+|........ .   ....+.+|+.+++.++||||+++++++..++.+|||||||.+|
T Consensus         6 lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~   85 (299)
T d1ua2a_           6 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETD   85 (299)
T ss_dssp             EEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEE
T ss_pred             eccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhcch
Confidence            399999999985432     122221111100 0   1124668999999999999999999999999999999999998


Q ss_pred             CHHHHHHHcCCCCHHHHhhhh
Q psy14717        103 SLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       103 sL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++..+......+++..++.++
T Consensus        86 ~~~~~~~~~~~l~~~~~~~~~  106 (299)
T d1ua2a_          86 LEVIIKDNSLVLTPSHIKAYM  106 (299)
T ss_dssp             HHHHHTTCCSSCCSSHHHHHH
T ss_pred             HHhhhhhcccCCCHHHHHHHH
Confidence            888777666778888777654

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=5.4e-16  Score=103.79  Aligned_cols=90  Identities=18%  Similarity=0.227  Sum_probs=69.4

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFY   83 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~   83 (125)
                      +.+.|++.+.|        |+|+||.||++.+.          .++++............+.+|+.+++.++||||++++
T Consensus        18 ~~~~~~l~~~l--------G~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~   89 (308)
T d1p4oa_          18 AREKITMSREL--------GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL   89 (308)
T ss_dssp             CGGGEEEEEEE--------EECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             cHHHeEEeeEE--------eeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeee
Confidence            34677777888        99999999986431          1223222221222333577999999999999999999


Q ss_pred             eeEEeCCeEEEEEEecCCCCHHHHHHHc
Q psy14717         84 GAFISDQDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      +.+..++.++++||||++|+|.+++...
T Consensus        90 ~~~~~~~~~~lv~e~~~~g~l~~~~~~~  117 (308)
T d1p4oa_          90 GVVSQGQPTLVIMELMTRGDLKSYLRSL  117 (308)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHH
T ss_pred             eEEecCCceeEEEeecCCCCHHHHHHhc
Confidence            9999999999999999999999998764

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.47  E-value=2.9e-16  Score=103.89  Aligned_cols=100  Identities=16%  Similarity=0.219  Sum_probs=75.9

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      ++|+++++|        |+|+||.||++.+.    .|+++...... ......+.+|+.+++.++||||+++++.+..++
T Consensus         2 ~~Y~~~~~i--------G~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~   73 (286)
T d1ob3a_           2 EKYHGLEKI--------GEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK   73 (286)
T ss_dssp             CSEEEEEEE--------EEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS
T ss_pred             CCceeccEE--------ecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCC
Confidence            467778888        99999999986432    12222111111 111235678999999999999999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..++++|++.++.+..+.+..+.+++..++.++
T Consensus        74 ~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~  106 (286)
T d1ob3a_          74 RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFL  106 (286)
T ss_dssp             CEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHH
T ss_pred             ceeEEEEeehhhhHHHHHhhcCCcchhhhHHHH
Confidence            999999999998877777767889999887765

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=3.4e-15  Score=100.01  Aligned_cols=93  Identities=11%  Similarity=0.103  Sum_probs=66.1

Q ss_pred             CCCCCCchhHHHHHHH--------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEe-CCeEEEEEEecCC
Q psy14717         31 KLPAGIFTDSFRDFVD--------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFIS-DQDISICMEYMDG  101 (125)
Q Consensus        31 ~lg~g~fg~v~~~~~~--------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~-~~~~~iv~e~~~~  101 (125)
                      .||+|+||+||++...        .+++.............+.+|+.++++++||||+++++++.. ++..++|||||++
T Consensus        34 ~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~  113 (311)
T d1r0pa_          34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKH  113 (311)
T ss_dssp             EEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTT
T ss_pred             EEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeec
Confidence            4699999999986431        122221111111223467899999999999999999999876 4679999999999


Q ss_pred             CCHHHHHHHc-CCCCHHHHhhhh
Q psy14717        102 GSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus       102 GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      |+|.+++... ..+++..+..++
T Consensus       114 g~l~~~~~~~~~~~~~~~~~~i~  136 (311)
T d1r0pa_         114 GDLRNFIRNETHNPTVKDLIGFG  136 (311)
T ss_dssp             CBHHHHHHCTTCCCBHHHHHHHH
T ss_pred             CchhhhhccccccchHHHHHHHH
Confidence            9999998865 345565554443

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.3e-15  Score=100.36  Aligned_cols=99  Identities=18%  Similarity=0.186  Sum_probs=67.7

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCcc--ccHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSER--ADLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~--~~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      .+|+++++|        |+|+||.||++...        .+++......  .......+.+|+.+++.++||||++++++
T Consensus         8 ~d~~~~~~i--------G~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~   79 (273)
T d1u46a_           8 KDLRLLEKL--------GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGV   79 (273)
T ss_dssp             GGEEEEEEC--------C----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             HHeEEEEEE--------ecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEE
Confidence            467888888        99999999986421        1112111111  11122357799999999999999999999


Q ss_pred             EEeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         86 FISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +.++ .++++||||++|++.+++..+ +.+++..+..++
T Consensus        80 ~~~~-~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~  117 (273)
T d1u46a_          80 VLTP-PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA  117 (273)
T ss_dssp             ECSS-SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHH
T ss_pred             Eeec-chheeeeeecCcchhhhhhcccCCCCHHHHHHHH
Confidence            9664 678999999999999987764 568988876654

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=1.8e-15  Score=101.54  Aligned_cols=99  Identities=12%  Similarity=0.174  Sum_probs=71.4

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH---------HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeE
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD---------RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAF   86 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~   86 (125)
                      ++|++++.|        |+|+||.||++.+.         .+.+.............+.+|+.+++.++||||+++++++
T Consensus         9 ~dy~~~~~l--------G~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~   80 (317)
T d1xkka_           9 TEFKKIKVL--------GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGIC   80 (317)
T ss_dssp             TTEEEEEEE--------EECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             HHCEEeeEE--------ecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            357888888        99999999986431         1111111111111123577999999999999999999999


Q ss_pred             EeCCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         87 ISDQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        87 ~~~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      .++ ..++++|++.+|+|.+++... ..+++..+.+++
T Consensus        81 ~~~-~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~  117 (317)
T d1xkka_          81 LTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC  117 (317)
T ss_dssp             ESS-SEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHH
T ss_pred             ecC-CeeEEEEeccCCcccccccccccCCCHHHHHHHH
Confidence            765 578899999999999988875 578888776654

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=3.8e-15  Score=98.48  Aligned_cols=100  Identities=19%  Similarity=0.251  Sum_probs=77.3

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcc-ccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSER-ADLKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      +.|+++++|        |+|+||.||++.+.     .|+|...... .......+.+|+.+++.++|+||+++++++...
T Consensus         2 ~ry~~i~~L--------G~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~   73 (292)
T d1unla_           2 QKYEKLEKI--------GEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD   73 (292)
T ss_dssp             CSEEEEEEE--------EECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             CCCEeeeEE--------ecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccc
Confidence            457788888        99999999986432     1222211111 111223567899999999999999999999999


Q ss_pred             CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ...+++++++.+++|..++...+.+++..++.++
T Consensus        74 ~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~  107 (292)
T d1unla_          74 KKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFL  107 (292)
T ss_dssp             SEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHH
T ss_pred             cceeEEeeeccccccccccccccccchhHHHHHH
Confidence            9999999999999999998888889988877664

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=3.9e-15  Score=98.00  Aligned_cols=100  Identities=11%  Similarity=0.195  Sum_probs=73.8

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-----HHhhhHHHHHHHHHhcC--CCceeeee
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-----LKTLSATTILKVLHECN--FAHIVGFY   83 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-----~~~~~~~~e~~~~~~~~--h~~iv~~~   83 (125)
                      +.|++.+.|        |+|+||.||++...     .+++........     .....+.+|+.+++.++  ||||++++
T Consensus         4 ~~Y~i~~~l--------G~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~   75 (273)
T d1xwsa_           4 SQYQVGPLL--------GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLL   75 (273)
T ss_dssp             TTEEEEEEE--------EEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEE
T ss_pred             CeEEEeEEE--------eeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEE
Confidence            467787888        99999999985431     111111110000     01123568999999875  89999999


Q ss_pred             eeEEeCCeEEEEEEecCC-CCHHHHHHHcCCCCHHHHhhhh
Q psy14717         84 GAFISDQDISICMEYMDG-GSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        84 ~~~~~~~~~~iv~e~~~~-GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +++.+++.+|++|||+.+ +++.++++....+++..++.++
T Consensus        76 ~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~  116 (273)
T d1xwsa_          76 DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF  116 (273)
T ss_dssp             EEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHH
T ss_pred             EEEeeCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHH
Confidence            999999999999999986 6899999888889998887665

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=9.7e-15  Score=98.20  Aligned_cols=103  Identities=20%  Similarity=0.253  Sum_probs=77.6

Q ss_pred             CCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH--------HHhhcCCCccc---cHHhhhHHHHHHHHHhcCC-Ccee
Q psy14717         13 RPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD--------RCLKKNPSERA---DLKTLSATTILKVLHECNF-AHIV   80 (125)
Q Consensus        13 ~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~--------~~~~~~~~~~~---~~~~~~~~~e~~~~~~~~h-~~iv   80 (125)
                      ...++|++++.|        |+|+||.||++...        .|++.......   ......+.+|+.+++.++| |||+
T Consensus        21 ~~l~~y~~~~~I--------G~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv   92 (322)
T d1vzoa_          21 VGIENFELLKVL--------GTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLV   92 (322)
T ss_dssp             CCGGGEEEEEEE--------EETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBC
T ss_pred             cchhceEEEEEE--------ecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEE
Confidence            346789999999        99999999985320        12221111110   0112246689999999966 8999


Q ss_pred             eeeeeEEeCCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         81 GFYGAFISDQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        81 ~~~~~~~~~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ++++.+.++..++++||||.+|+|.+++...+.+++..++.++
T Consensus        93 ~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~  135 (322)
T d1vzoa_          93 TLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYV  135 (322)
T ss_dssp             CEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHH
T ss_pred             EeeeeeccCCceeeeeecccccHHHHHHHhcccccHHHHHHHH
Confidence            9999999999999999999999999999998888887776554

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.3e-14  Score=96.83  Aligned_cols=86  Identities=19%  Similarity=0.143  Sum_probs=59.3

Q ss_pred             CCCCchhHHHHHHH---HHhhcCCCccccHHhhhHHHHHH--HHHhcCCCceeeeeeeEEeCC----eEEEEEEecCCCC
Q psy14717         33 PAGIFTDSFRDFVD---RCLKKNPSERADLKTLSATTILK--VLHECNFAHIVGFYGAFISDQ----DISICMEYMDGGS  103 (125)
Q Consensus        33 g~g~fg~v~~~~~~---~~~~~~~~~~~~~~~~~~~~e~~--~~~~~~h~~iv~~~~~~~~~~----~~~iv~e~~~~Gs  103 (125)
                      |+|+||.||++...   .++++...    .......+|.+  .++.++||||+++++++...+    .+|+|||||++|+
T Consensus        12 G~G~fg~Vy~~~~~g~~vAvK~~~~----~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~   87 (303)
T d1vjya_          12 GKGRFGEVWRGKWRGEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGS   87 (303)
T ss_dssp             ECCSSSEEEEEEETTEEEEEEEECG----GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCB
T ss_pred             eeCCCeEEEEEEECCEEEEEEEECc----cchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCC
Confidence            99999999986432   11221111    11112334444  445689999999999998754    5899999999999


Q ss_pred             HHHHHHHcCCCCHHHHhhhh
Q psy14717        104 LDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus       104 L~~~l~~~~~l~~~~~~~~~  123 (125)
                      |.+++++. .+++.....++
T Consensus        88 L~~~l~~~-~l~~~~~~~~~  106 (303)
T d1vjya_          88 LFDYLNRY-TVTVEGMIKLA  106 (303)
T ss_dssp             HHHHHHHC-CBCHHHHHHHH
T ss_pred             HHHHHhcC-CCCHHHHHHHH
Confidence            99999884 67776655443

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=9.2e-15  Score=99.03  Aligned_cols=99  Identities=14%  Similarity=0.157  Sum_probs=67.6

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCceeeeeeeEEeCC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHIVGFYGAFISDQ   90 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~~   90 (125)
                      +.|++++.|        |+|+||.||++...     .|++.............+.+|+.+++.++|||++++++++..+.
T Consensus         8 ~rY~~~~~L--------G~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~   79 (345)
T d1pmea_           8 PRYTNLSYI--------GEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT   79 (345)
T ss_dssp             TTEEEEEEC--------C---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS
T ss_pred             CCeEEEEEE--------eeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeecc
Confidence            468888888        99999999996432     12222211111122235678999999999999999999987653


Q ss_pred             e----EEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         91 D----ISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        91 ~----~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .    .+++++++.+|+|.+++.. +.+++..++.++
T Consensus        80 ~~~~~~~~l~~~~~~g~L~~~l~~-~~l~~~~i~~i~  115 (345)
T d1pmea_          80 IEQMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFL  115 (345)
T ss_dssp             TTTCCCEEEEEECCCEEHHHHHHH-CCCCHHHHHHHH
T ss_pred             ccccceEEEEEeecCCchhhhhhc-CCCCHHHHHHHH
Confidence            2    3445566778999999987 579998887665

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.7e-14  Score=97.57  Aligned_cols=99  Identities=14%  Similarity=0.240  Sum_probs=72.3

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ++|++++.|        |+|+||.||++.+.     .|+|........ .....+.+|+.+++.++|+|++++++++...
T Consensus        18 ~rY~i~~~L--------G~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~   89 (348)
T d2gfsa1          18 ERYQNLSPV--------GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   89 (348)
T ss_dssp             TTEEEEEEC--------GGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             CCeEEEEEE--------ecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeec
Confidence            468888888        99999999986432     123332222111 2223567899999999999999999998753


Q ss_pred             C-----eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 Q-----DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ~-----~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      .     ..+++++++.+|+|.+++.. +.+++..++.++
T Consensus        90 ~~~~~~~~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~  127 (348)
T d2gfsa1          90 RSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLI  127 (348)
T ss_dssp             SSTTTCCCCEEEEECCSEEHHHHHTT-CCCCHHHHHHHH
T ss_pred             cccccCceEEEEEeecCCchhhhccc-ccccHHHHHHHH
Confidence            2     34667788899999999976 579998887765

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=3.2e-14  Score=96.27  Aligned_cols=100  Identities=20%  Similarity=0.315  Sum_probs=67.0

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEE
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFI   87 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~   87 (125)
                      ..+.|++++.|        |+|+||.||++.+.     .|++........ .....+.+|+.+++.++|||+++++++|.
T Consensus        16 ~~~~Y~~i~~l--------G~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~   87 (346)
T d1cm8a_          16 VRAVYRDLQPV--------GSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFT   87 (346)
T ss_dssp             CBSSEEEEEEC--------------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEEC
T ss_pred             cCCcEEEEEEE--------ecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEec
Confidence            34578888888        99999999986432     122222211111 12235678999999999999999999998


Q ss_pred             eCC------eEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         88 SDQ------DISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        88 ~~~------~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..+      .+|++|||| +++|..+++. +.+++..++.++
T Consensus        88 ~~~~~~~~~~~~lv~e~~-~~~l~~~~~~-~~l~~~~~~~~~  127 (346)
T d1cm8a_          88 PDETLDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLV  127 (346)
T ss_dssp             SCSSTTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHH
T ss_pred             cCccccccceEEEEEecc-cccHHHHHHh-ccccHHHHHHHH
Confidence            754      479999999 4588888776 579998887665

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=4.2e-14  Score=94.61  Aligned_cols=104  Identities=16%  Similarity=0.192  Sum_probs=73.4

Q ss_pred             CCCchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccc-cHHhhhHHHHHHHHHhcCCCceeeeeee
Q psy14717         12 PRPMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERA-DLKTLSATTILKVLHECNFAHIVGFYGA   85 (125)
Q Consensus        12 ~~~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~-~~~~~~~~~e~~~~~~~~h~~iv~~~~~   85 (125)
                      =++.+.|+++++|        |+|+||.||++.+.     .|+++...... ......+.+|+.+++.++|+|+++++++
T Consensus         6 ~~~~~rY~i~~~L--------G~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~   77 (318)
T d3blha1           6 CDEVSKYEKLAKI--------GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI   77 (318)
T ss_dssp             SCBGGGEEEEEEE--------EECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CCccCCEEEEEEE--------ecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEee
Confidence            3557899999999        99999999986432     12222111111 1112246689999999999999999998


Q ss_pred             EEe--------CCeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         86 FIS--------DQDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        86 ~~~--------~~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      +..        .+.+|++||||.++.+..+......+++..++.++
T Consensus        78 ~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~  123 (318)
T d3blha1          78 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVM  123 (318)
T ss_dssp             EEC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHH
T ss_pred             eecccccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHH
Confidence            865        34589999999998777666555778888876654

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.33  E-value=3.6e-14  Score=95.35  Aligned_cols=93  Identities=10%  Similarity=0.175  Sum_probs=69.7

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccH------HhhhHHHHHHHHHhc-CCCceeeeeeeEE
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADL------KTLSATTILKVLHEC-NFAHIVGFYGAFI   87 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~------~~~~~~~e~~~~~~~-~h~~iv~~~~~~~   87 (125)
                      .++|+++++|        |+|+||.||++.+     +...+..+.      ....+.+|+.+++.+ .||||++++++|.
T Consensus        34 ~d~y~i~~~L--------G~G~fg~V~~a~~-----~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~  100 (328)
T d3bqca1          34 QDDYQLVRKL--------GRGKYSEVFEAIN-----ITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVK  100 (328)
T ss_dssp             GGGEEEEEEE--------EECSSEEEEEEEE-----TTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred             CcCeEEEEEE--------ecCcCeEEEEEEE-----CCCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEE
Confidence            4578888888        9999999998543     222221211      123567899999998 5999999999998


Q ss_pred             eC--CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         88 SD--QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        88 ~~--~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                      ..  ..++++||||.+|+|..+.   +.+++..++.++
T Consensus       101 ~~~~~~~~~v~e~~~~~~L~~~~---~~l~e~~i~~i~  135 (328)
T d3bqca1         101 DPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYM  135 (328)
T ss_dssp             CTTTCSEEEEEECCCSCBGGGTT---TSCCHHHHHHHH
T ss_pred             ecCCCceeEEEeecCCCcHHHHh---cCCCHHHHHHHH
Confidence            54  4699999999999987653   468988887765

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=2.2e-14  Score=95.35  Aligned_cols=90  Identities=17%  Similarity=0.194  Sum_probs=62.4

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHH----------HHhhcCCCccccHHhhhHHHHHHHHHhc-CCCceeee
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD----------RCLKKNPSERADLKTLSATTILKVLHEC-NFAHIVGF   82 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~----------~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~h~~iv~~   82 (125)
                      +.+.|++.++|        |+|+||.||++.+.          .+++.............+.+|..++.++ +|+||+.+
T Consensus        11 ~~~~y~~~~~i--------G~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~   82 (299)
T d1ywna1          11 PRDRLKLGKPL--------GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   82 (299)
T ss_dssp             CGGGEEEEEEE--------EECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             cHHHEEEeeEE--------eecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEe
Confidence            44678888888        99999999985421          1112211111112223456777777765 78999999


Q ss_pred             eeeEEeC-CeEEEEEEecCCCCHHHHHHHc
Q psy14717         83 YGAFISD-QDISICMEYMDGGSLDLILKKA  111 (125)
Q Consensus        83 ~~~~~~~-~~~~iv~e~~~~GsL~~~l~~~  111 (125)
                      ++.+... +.++++||||++|+|.++++..
T Consensus        83 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~  112 (299)
T d1ywna1          83 LGACTKPGGPLMVIVEFCKFGNLSTYLRSK  112 (299)
T ss_dssp             EEEECSTTSCCEEEEECCTTCBHHHHHHHT
T ss_pred             eeeeccCCCeEEEEEEecCCCcHHHHHHhc
Confidence            9987664 4699999999999999999864

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=3.5e-14  Score=96.28  Aligned_cols=95  Identities=13%  Similarity=0.185  Sum_probs=67.1

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHH-----hhhHHHHHHHHHhcCCCceeeeeeeEEeC-
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLK-----TLSATTILKVLHECNFAHIVGFYGAFISD-   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~e~~~~~~~~h~~iv~~~~~~~~~-   89 (125)
                      ..|+.++.|        |+|+||.||++.+     +...+..+.+     .....+|+.+++.++|+||++++++|... 
T Consensus        20 ~~Y~~~k~L--------G~G~fg~Vy~a~~-----~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~~~~~~~~~~   86 (350)
T d1q5ka_          20 VSYTDTKVI--------GNGSFGVVYQAKL-----CDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSG   86 (350)
T ss_dssp             EEEEEEEEE--------EEETTEEEEEEEE-----TTTCCEEEEEEEECCSSSCCHHHHHHHHCCCTTBCCEEEEEEEC-
T ss_pred             CCcEeeeEE--------eeCcCeEEEEEEE-----CCCCCEEEEEEECccchHHHHHHHHHHhcCCCCCCcEEEEEEecC
Confidence            367777888        9999999998432     2222222222     11345799999999999999999998653 


Q ss_pred             -----CeEEEEEEecCCCCHHHHH---HHcCCCCHHHHhhhh
Q psy14717         90 -----QDISICMEYMDGGSLDLIL---KKAGKIPEHILGTIT  123 (125)
Q Consensus        90 -----~~~~iv~e~~~~GsL~~~l---~~~~~l~~~~~~~~~  123 (125)
                           .++|++||||++|.+..+.   .....+++..++.++
T Consensus        87 ~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~  128 (350)
T d1q5ka_          87 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYM  128 (350)
T ss_dssp             -CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHH
T ss_pred             ccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHH
Confidence                 3589999999986444433   233579998877665

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=8.3e-14  Score=94.58  Aligned_cols=97  Identities=16%  Similarity=0.199  Sum_probs=67.1

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCcccc-HHhhhHHHHHHHHHhcCCCceeeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERAD-LKTLSATTILKVLHECNFAHIVGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~-~~~~~~~~e~~~~~~~~h~~iv~~~~~~~~~   89 (125)
                      ..|++++.|        |+|+||.||++.+.     .|+|.......+ .....+.+|+.+++.++||||++++++|...
T Consensus        17 ~~Y~i~~~L--------G~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~   88 (355)
T d2b1pa1          17 KRYQNLKPI--------GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQ   88 (355)
T ss_dssp             TTEEEEEEC--------SCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred             CCeEEEEEe--------ecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecc
Confidence            467888888        99999999986432     122222221111 2223567899999999999999999999643


Q ss_pred             ------CeEEEEEEecCCCCHHHHHHHcCCCCHHHHhhhh
Q psy14717         90 ------QDISICMEYMDGGSLDLILKKAGKIPEHILGTIT  123 (125)
Q Consensus        90 ------~~~~iv~e~~~~GsL~~~l~~~~~l~~~~~~~~~  123 (125)
                            ..+|++||||.+|. .+.+  ...+++..++.++
T Consensus        89 ~~~~~~~~~~iv~Ey~~~~l-~~~~--~~~~~~~~i~~~~  125 (355)
T d2b1pa1          89 KTLEEFQDVYLVMELMDANL-CQVI--QMELDHERMSYLL  125 (355)
T ss_dssp             CSTTTCCEEEEEEECCSEEH-HHHH--TSCCCHHHHHHHH
T ss_pred             cccccCceeEEEEeccchHH-HHhh--hcCCCHHHHHHHH
Confidence                  67999999998754 4444  3468988887765

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.9e-12  Score=85.95  Aligned_cols=101  Identities=15%  Similarity=0.222  Sum_probs=67.1

Q ss_pred             chHHHHHHHhhcCCCCCCCCCCchhHHHHHHH------HHhhcCCCcccc-HHhhhHHHHHHHHHhc---CCCceeeeee
Q psy14717         15 MAIFELLDYIVNEPPPKLPAGIFTDSFRDFVD------RCLKKNPSERAD-LKTLSATTILKVLHEC---NFAHIVGFYG   84 (125)
Q Consensus        15 ~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~------~~~~~~~~~~~~-~~~~~~~~e~~~~~~~---~h~~iv~~~~   84 (125)
                      .+.|+++++|        |+|+||.||++.+.      .|++........ .......+|+.+++.+   +||||+++++
T Consensus         6 ~~~Y~i~~~L--------G~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~   77 (305)
T d1blxa_           6 DQQYECVAEI--------GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFD   77 (305)
T ss_dssp             GGTEEEEEEE--------EEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEE
T ss_pred             cCCEEEEEEE--------ecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeee
Confidence            4578888899        99999999985421      111111110000 0112355788777654   7999999999


Q ss_pred             eEEe-----CCeEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         85 AFIS-----DQDISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        85 ~~~~-----~~~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      +|..     ...++++||+|.+|++....... ..+++..++.++
T Consensus        78 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (305)
T d1blxa_          78 VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMM  122 (305)
T ss_dssp             EEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHH
T ss_pred             eecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHH
Confidence            9864     24689999999998776555443 568888777654

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.09  E-value=1e-11  Score=82.19  Aligned_cols=95  Identities=14%  Similarity=0.087  Sum_probs=68.3

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCC-CceeeeeeeEEeCC
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNF-AHIVGFYGAFISDQ   90 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h-~~iv~~~~~~~~~~   90 (125)
                      .|++.+.|        |+|+||.||++.+.     .|++.....   .....+.+|+..+..+.| +|++.+++++..+.
T Consensus         6 ~Y~i~~~i--------G~G~fG~Vy~a~~~~~~~~vAvK~~~~~---~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~   74 (293)
T d1csna_           6 HYKVGRRI--------GEGSFGVIFEGTNLLNNQQVAIKFEPRR---SDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL   74 (293)
T ss_dssp             TEEEEEEE--------EECSSCEEEEEEETTTTEEEEEEEEECC---TTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETT
T ss_pred             ceEEEEEE--------ecCCCeEEEEEEECCCCCEEEEEEEccc---cCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCC
Confidence            56677777        99999999986431     111111110   111245678888988865 89999999999999


Q ss_pred             eEEEEEEecCCCCHHHHHHHc-CCCCHHHHhhhh
Q psy14717         91 DISICMEYMDGGSLDLILKKA-GKIPEHILGTIT  123 (125)
Q Consensus        91 ~~~iv~e~~~~GsL~~~l~~~-~~l~~~~~~~~~  123 (125)
                      ..+++|||+ +|+|.++++.. ..+++..+..++
T Consensus        75 ~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~  107 (293)
T d1csna_          75 HNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAA  107 (293)
T ss_dssp             EEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHH
T ss_pred             ccEEEEEec-CCCHHHHHHhhccchhhHHHHHHH
Confidence            999999999 56999999876 468877766554

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.06  E-value=1.3e-11  Score=81.73  Aligned_cols=96  Identities=14%  Similarity=-0.002  Sum_probs=65.4

Q ss_pred             hHHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcCCCce-eeeeeeEEeC
Q psy14717         16 AIFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECNFAHI-VGFYGAFISD   89 (125)
Q Consensus        16 ~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~h~~i-v~~~~~~~~~   89 (125)
                      +.|++.+.|        |+|+||.||++.+.     .|++....   ......+.+|+.+++.++|+++ +.+..++...
T Consensus         7 ~rY~l~~~i--------G~G~fG~Vy~a~~~~~~~~vAvK~~~~---~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~   75 (299)
T d1ckia_           7 NRYRLGRKI--------GSGSFGDIYLGTDIAAGEEVAIKLECV---KTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEG   75 (299)
T ss_dssp             TTEEEEEEE--------EECSSSEEEEEEETTTTEEEEEEEEES---CTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEET
T ss_pred             CEEEEeEEE--------eeCCCcEEEEEEECCCCCEEEEEEEch---hccCHHHHHHHHHHHHccCCCcccEEEEEEecC
Confidence            357888888        99999999986431     11211111   1112246789999999976665 4555666778


Q ss_pred             CeEEEEEEecCCCCHHHHHHH-cCCCCHHHHhhhh
Q psy14717         90 QDISICMEYMDGGSLDLILKK-AGKIPEHILGTIT  123 (125)
Q Consensus        90 ~~~~iv~e~~~~GsL~~~l~~-~~~l~~~~~~~~~  123 (125)
                      +..+++||||.+ +|...+.. .+.+++..+..++
T Consensus        76 ~~~~ivme~~~~-~l~~~~~~~~~~~~~~~~~~~~  109 (299)
T d1ckia_          76 DYNVMVMELLGP-SLEDLFNFCSRKFSLKTVLLLA  109 (299)
T ss_dssp             TEEEEEEECCCC-BHHHHHHHTTTCCCHHHHHHHH
T ss_pred             CEEEEEEEEcCC-chhhhhhhccCCCcHHHHHHHH
Confidence            889999999966 66666654 4679988877665

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.02  E-value=2.2e-07  Score=62.25  Aligned_cols=97  Identities=21%  Similarity=0.236  Sum_probs=59.0

Q ss_pred             HHHHHHHhhcCCCCCCCCCCchhHHHHHHH-----HHhhcCCCccccHHhhhHHHHHHHHHhcC-----------CCcee
Q psy14717         17 IFELLDYIVNEPPPKLPAGIFTDSFRDFVD-----RCLKKNPSERADLKTLSATTILKVLHECN-----------FAHIV   80 (125)
Q Consensus        17 ~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~-----~~~~~~~~~~~~~~~~~~~~e~~~~~~~~-----------h~~iv   80 (125)
                      +|+++++|        |+|+||.||++...     .|+|+....  ........+|+.+++.+.           |+||+
T Consensus        14 rY~i~~~L--------G~G~fg~Vy~~~~~~~g~~vAvKvi~~~--~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv   83 (362)
T d1q8ya_          14 RYILVRKL--------GWGHFSTVWLAKDMVNNTHVAMKIVRGD--KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHIL   83 (362)
T ss_dssp             TEEEEEEE--------EECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBC
T ss_pred             cEEEEEEE--------eeCCCeEEEEEEECCCCCEEEEEEEecc--ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceE
Confidence            58888999        99999999985321     111111111  011124457887777654           57899


Q ss_pred             eeeeeEEe--CCeEEEEEEecCCCC-HHHHHHHc--CCCCHHHHhhhh
Q psy14717         81 GFYGAFIS--DQDISICMEYMDGGS-LDLILKKA--GKIPEHILGTIT  123 (125)
Q Consensus        81 ~~~~~~~~--~~~~~iv~e~~~~Gs-L~~~l~~~--~~l~~~~~~~~~  123 (125)
                      ++++++..  ....+.+++++..+. ........  ..+++..++.++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~  131 (362)
T d1q8ya_          84 KLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQIS  131 (362)
T ss_dssp             CCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHH
T ss_pred             EEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHH
Confidence            99988765  456677777776654 33333332  467777766543

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.44  E-value=0.00021  Score=43.35  Aligned_cols=37  Identities=19%  Similarity=0.240  Sum_probs=27.8

Q ss_pred             HHHHHHHHHhcCCCceeeeeeeEEeCCeEEEEEEecCCCCH
Q psy14717         64 ATTILKVLHECNFAHIVGFYGAFISDQDISICMEYMDGGSL  104 (125)
Q Consensus        64 ~~~e~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~GsL  104 (125)
                      ..+|...+..+.|.+++..++..  ..  +++|||++++.+
T Consensus        61 ~~~e~~~l~~l~~~~v~~~~~~~--~~--~lvme~~~~~~~   97 (191)
T d1zara2          61 ARNEFRALQKLQGLAVPKVYAWE--GN--AVLMELIDAKEL   97 (191)
T ss_dssp             HHHHHHHHHHTTTSSSCCEEEEE--TT--EEEEECCCCEEG
T ss_pred             HHHHHHHHHHccCCCcceEEEec--CC--EEEEEeeccccc
Confidence            34678888889999888776532  22  799999999654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.62  E-value=1.5  Score=27.84  Aligned_cols=49  Identities=78%  Similarity=1.369  Sum_probs=39.7

Q ss_pred             CchHHHHHHHhhcCCCCCCCCCCchhHHHHHHHHHhhcCCCccccHHhh
Q psy14717         14 PMAIFELLDYIVNEPPPKLPAGIFTDSFRDFVDRCLKKNPSERADLKTL   62 (125)
Q Consensus        14 ~~~~~~~~~~i~~~~~~~lg~g~fg~v~~~~~~~~~~~~~~~~~~~~~~   62 (125)
                      ....++.+..+....++.+..+.++.-++.+...++...+.+|.+..+.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~  295 (322)
T d1s9ja_         247 PMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQL  295 (322)
T ss_dssp             CCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             chhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence            3456777888888888888888888888888888999999988877654