Diaphorina citri psyllid: psy14906

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580---
MVESTPSSSSTSSNSSKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ
ccccccccccccccccccEEccECccEEcccccEEEEEEcccccEEEEEEcccEEEEEEccccCEEEECccccccEEEECccccEEEEEcccEEEEEEccccEEEEcccccccEEEEECcccEEEEECccccEEEEEccccEEEEEEEEcccccEEEcccccccEEEEEEcccccEEEEECccccEEEEEccccCEEEEEEcccccEEEEEEccccccEEEEEcccccEEEEEccccEEEEEEcccccccEEEEEEcccccEEEEEcccccEEEEEccccccccCEEEEccccccccEEEEEccccccEEEEECccccEEEEEccccccccEEEEEEEEcccEEEEEEccccCEEEEccccCEEEEEEEEcccccEEEEEEEcccEEEEEEccccCEEEECccccccccccccccEEEEEcccccEEEEECccccEEEEEcccccEEEEccccccccccccEEEEEEcccccEEEEEEccccEEEEEccccccccEEEccccccEEEEEEcccccEEEEECcccEEEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEcccccHHcccc
*****************IFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET***********RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ
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MVESTPSSSSTSSNSSKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGxxxxxxxxxxxxxxxxxxxxxFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Uncharacterized WD repeat-containing protein C1672.07 confidentO14053
WD repeat-containing protein 36 Involved in T-cell activation and highly co-regulated with IL2.confidentQ8NI36

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0030684 [CC]preribosomeprobableGO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424, GO:0030529
GO:0043232 [CC]intracellular non-membrane-bounded organelleprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0043228, GO:0044424, GO:0043226
GO:0044446 [CC]intracellular organelle partprobableGO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043226, GO:0044422
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2YMU, chain A
Confidence level:very confident
Coverage over the Query: 29-333,356-582
View the alignment between query and template
View the model in PyMOL
Template: 2OAJ, chain A
Confidence level:confident
Coverage over the Query: 15-581
View the alignment between query and template
View the model in PyMOL