Psyllid ID: psy14906
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 583 | 2.2.26 [Sep-21-2011] | |||||||
| Q8NI36 | 951 | WD repeat-containing prot | yes | N/A | 0.984 | 0.603 | 0.416 | 1e-144 | |
| O14053 | 902 | Uncharacterized WD repeat | yes | N/A | 0.939 | 0.607 | 0.332 | 9e-84 | |
| Q06078 | 939 | U3 small nucleolar RNA-as | yes | N/A | 0.924 | 0.574 | 0.288 | 1e-63 | |
| Q8YRI1 | 1526 | Uncharacterized WD repeat | yes | N/A | 0.758 | 0.289 | 0.240 | 2e-16 | |
| Q8YTC2 | 1258 | Uncharacterized WD repeat | no | N/A | 0.819 | 0.379 | 0.225 | 4e-14 | |
| Q8YV57 | 1683 | Uncharacterized WD repeat | no | N/A | 0.734 | 0.254 | 0.227 | 5e-13 | |
| Q9SJT9 | 1218 | Coatomer subunit alpha-2 | no | N/A | 0.245 | 0.117 | 0.298 | 1e-10 | |
| Q94A40 | 1216 | Coatomer subunit alpha-1 | no | N/A | 0.238 | 0.114 | 0.296 | 3e-10 | |
| Q9AUR7 | 1218 | Coatomer subunit alpha-2 | no | N/A | 0.241 | 0.115 | 0.287 | 9e-10 | |
| Q9AUR8 | 1218 | Coatomer subunit alpha-1 | no | N/A | 0.238 | 0.114 | 0.290 | 1e-09 |
| >sp|Q8NI36|WDR36_HUMAN WD repeat-containing protein 36 OS=Homo sapiens GN=WDR36 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust.
Identities = 256/615 (41%), Positives = 372/615 (60%), Gaps = 41/615 (6%)
Query: 2 VESTPSSSSTSSNSSKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCN 61
+ + +S +S +F RALG SN +P V RF ++ TCVGK+FH Y
Sbjct: 53 IAAAMERASERRTASALFAGFRALGLFSNDIPHVVRFSALKRRFYVTTCVGKSFHTYDVQ 112
Query: 62 HFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFG 121
L++VS DI C+++D ++ + N+ A+ R +IV T+KGH + +H + PFG
Sbjct: 113 KLSLVAVSNSVPQDICCMAADGRLVFAAYGNVFSAFARNKEIVHTFKGHKAEIHFLQPFG 172
Query: 122 PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKI--------------MGKR------- 160
H+ISVD + + +W I +EE YL+L+FD FKI +G
Sbjct: 173 DHIISVDTDGILIIWHIYSEEEYLQLTFDKSVFKISAILHPSTYLNKILLGSEQGSLQLW 232
Query: 161 -------------WNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPV 207
W V L+ +P VD++ +GL + ++I+HNI +E+LM+F Q WGP+
Sbjct: 233 NVKSNKLLYTFPGWKVGVTALQQAPAVDVVAIGLMSGQVIIHNIKFNETLMKFRQDWGPI 292
Query: 208 TALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS 267
T++SFRTDG P+M +GS GH+ +W+LED+++ NQ++ AH + G FL+ EPLLVT+
Sbjct: 293 TSISFRTDGHPVMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHREPLLVTNG 352
Query: 268 PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327
DN L++WIFD G GRLLR R GHSAP I++YG + ILSA+ D TL+ F+T E
Sbjct: 353 ADNALRIWIFDGPTGEGRLLRFRMGHSAPLTNIRYYGQNGQQILSASQDGTLQSFSTVHE 412
Query: 328 TSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKV 387
NK+LG N+ +KRK M+ + LPP+++F+ ARE DW+ I A H GK
Sbjct: 413 KFNKSLGHGLINKKRVKRKGLQNTMSVR--LPPITKFAAEEARESDWDGIIACHQGKLSC 470
Query: 388 SLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHR 447
S W++ KS + FL P+ K+ + T V IT CGNF +IG SSG VD +N+QSG HR
Sbjct: 471 STWNYQKSTIGAYFLKPKELKKDDITA-TAVDITSCGNFAVIGLSSGTVDVYNMQSGIHR 529
Query: 448 GSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF 507
GS+G D H G VRGV D LNQ+ ++ G++ +K W+FK K + S+ L + +
Sbjct: 530 GSFGKDQ--AHKGSVRGVAVDGLNQLTVTTGSEGLLKFWNFKN--KILIHSVSLSSSPNI 585
Query: 508 FRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCT 567
H++S +L + LDDF+++++DI+T I+R+ SGH GQ+ D FSPD RWLI+A+MDC+
Sbjct: 586 MLLHRDSGILGLALDDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISAAMDCS 645
Query: 568 IRVWDIPSSQLIDCF 582
IR WD+PS LIDCF
Sbjct: 646 IRTWDLPSGCLIDCF 660
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Involved in T-cell activation and highly co-regulated with IL2. Homo sapiens (taxid: 9606) |
| >sp|O14053|YC47_SCHPO Uncharacterized WD repeat-containing protein C1672.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1672.07 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 311 bits (797), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 201/605 (33%), Positives = 307/605 (50%), Gaps = 57/605 (9%)
Query: 16 SKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDD 75
S+I+ R++G+VSN +P R L T VG F Y C LL V Q + +
Sbjct: 21 SRIYAPFRSIGHVSNAVPFDIE--ARGTHFLVTTSVGNTFQTYDCEKLNLLFVGKQLDKE 78
Query: 76 ITCLSSDFFHIYTSANNIIYAWRRGIDI--VGTYKGHTSPVHLILPFGPHLISVDEESNV 133
ITCL S + +A + I+A++RG I + + H + HL FG +I+ +V
Sbjct: 79 ITCLKSFKDFMLVAAGSKIFAYKRGKIIWDIDVEQEHGTVTHLD-AFGEWIIACTSSRHV 137
Query: 134 KVW---------------------DIKA---EETYLE---LSFDNDTFKIMGKR------ 160
VW DI + TYL L F + +I R
Sbjct: 138 YVWKHASKYSVPELHTTFLPNTNADITSLLHPSTYLNKILLGFSDGALQIWNLRVSKRVH 197
Query: 161 -----WNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTD 215
+ + L +PV+D++ VG + +I++ N+ LMEF Q G V + SFRTD
Sbjct: 198 EFQEFFGDGITSLTQAPVLDVLAVGTISGRIVIFNLKNGSILMEFKQD-GQVLSCSFRTD 256
Query: 216 GPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
G P++ S + G L+ W+L R+++N AH + FL +P+LVT+ PDN+LK W
Sbjct: 257 GTPILASSNPIGDLSFWDLSKRRIQNVTYNAHFGSLPKIQFLNGQPILVTAGPDNSLKEW 316
Query: 276 IFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGI 335
IFD DG R+LR R GH PP++++FYG S ++SAA D +LR + ++ + L
Sbjct: 317 IFDSMDGAPRILRSRNGHYEPPSFVKFYGKSVHFLISAATDRSLRAVSLYQDSQSTELSQ 376
Query: 336 ASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKS 395
S + + +L E+ LP ++ S REK W+N+ H + W+ +KS
Sbjct: 377 GSV----ISKAKKLNVRPEELKLPEITALSSSNTREKYWDNVLTAHKNDSSARTWN-WKS 431
Query: 396 KMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQ 455
K ++P + +S V ++ CGNF LIG S G VD +N+QSG R S+G +
Sbjct: 432 KTLGQHVLPTSDGTSVRS----VCVSCCGNFGLIGSSKGVVDVYNMQSGIKRKSFGQSSL 487
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS 515
G V V+ DN+N+I+++ D +K W F + + S+ + + I+ S
Sbjct: 488 SGK--PVTAVMLDNVNRILVTASLDGILKFWDFNKGNL--IDSLDVGSSITHAIYQHSSD 543
Query: 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
++AV DDF + I+D+ T I+R+L GH +LT DFS RWL+TAS+D TIR WD+P+
Sbjct: 544 LVAVACDDFGIRIVDVQTRKIVRELWGHSNRLTSFDFSDTGRWLVTASLDGTIRTWDLPT 603
Query: 576 SQLID 580
LID
Sbjct: 604 GHLID 608
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|Q06078|UTP21_YEAST U3 small nucleolar RNA-associated protein 21 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UTP21 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 181/627 (28%), Positives = 297/627 (47%), Gaps = 88/627 (14%)
Query: 16 SKIFLRHRALGYVSNHLPVVARFIRRRKETLF-VTCVGKAFHVYGCNHFKLLSVSPQHE- 73
SKIF R +G VSN +P + T + VTCVGK F +Y N LL VS +
Sbjct: 21 SKIFSPFRIIGNVSNGVPFATGTL---GSTFYIVTCVGKTFQIYDANTLHLLFVSEKETP 77
Query: 74 DDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNV 133
I LS+ F ++Y + N + ++RGI+ + V + FG +L + +++++
Sbjct: 78 SSIVALSAHFHYVYAAYENKVGIYKRGIEEHLLELETDANVEHLCIFGDYLCASTDDNSI 137
Query: 134 KVW--------------------DIKAEE--------TYLE----------LSFDNDTFK 155
++ +I+ E TYL L F+ T K
Sbjct: 138 FIYKKSDPQDKYPSEFYTKLTVTEIQGGEIVSLQHLATYLNKLTVVTKSNVLLFNVRTGK 197
Query: 156 IM--GKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFR 213
++ + + EP+PV+DII +G ++I+ N+ + + +++LSFR
Sbjct: 198 LVFTSNEFPDQITTAEPAPVLDIIALGTVTGEVIMFNMRKGKRIRTIKIPQSRISSLSFR 257
Query: 214 TDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKV---VTGAHFLYNEPLLVTSSPDN 270
TDG + G+++G L ++L+ R + +K HR+ VT A FL +P++VTS DN
Sbjct: 258 TDGSSHLSVGTSSGDLIFYDLDRRSRIHVLKNIHRESYGGVTQATFLNGQPIIVTSGGDN 317
Query: 271 TLKLWIFDKADGNG---------RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321
+LK ++FD + G R LR R GHS PP+YI F + S +LSA+ D +L
Sbjct: 318 SLKEYVFDPSLSQGSGDVVVQPPRYLRSRGGHSQPPSYIAFADSQSHFMLSASKDRSLWS 377
Query: 322 FNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIH 381
F+ + + ++ + S + + R+ K P + + AR +W NI H
Sbjct: 378 FSLRKDAQSQEM---SQRLHKKQDGGRVGGSTIKSKFPEIVALAIENARIGEWENIITAH 434
Query: 382 TGKNKVSLWSFYKSKM--------DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433
+ W ++ DD F+ V ++ CGNF IG S+
Sbjct: 435 KDEKFARTWDMRNKRVGRWTFDTTDDGFV-------------KSVAMSQCGNFGFIGSSN 481
Query: 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK 493
G + +N+QSG R Y H V G+ D +N+ ++S G D V + F ++
Sbjct: 482 GSITIYNMQSGILRKKYKL-----HKRAVTGISLDGMNRKMVSCGLDGIVGFYDFNKS-- 534
Query: 494 PPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFS 553
L +KLD I+ H+ S + A+ LDD ++ +ID T ++R+L GH ++T DFS
Sbjct: 535 TLLGKLKLDAPITAMVYHRSSDLFALALDDLSIVVIDAVTQRVVRQLWGHSNRITAFDFS 594
Query: 554 PDSRWLITASMDCTIRVWDIPSSQLID 580
P+ RW+++AS+D TIR WD+P+ ID
Sbjct: 595 PEGRWIVSASLDSTIRTWDLPTGGCID 621
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Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) |
| >sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 209/499 (41%), Gaps = 57/499 (11%)
Query: 106 TYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS 163
T KGH S V+ + G L S ++ V++WDI + + TFK R S
Sbjct: 901 TCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCL-------KTFKGHTSRVRS 953
Query: 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG 223
V SP ++ G S++ + L +I + E L F G V +++F DG M+ +G
Sbjct: 954 VVF----SPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGS-MLATG 1008
Query: 224 SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN 283
S + +W++ Q I + H V F + +L + S D T++LW D + GN
Sbjct: 1009 SGDQTVRLWDISSSQC-FYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLW--DISSGN 1065
Query: 284 GRLLRIREGHSAPPNYIQFYGNSSDNILSAAG--DSTLRIFNTKSET------------- 328
L +GH++ + F S D + A+G D +R+++ S
Sbjct: 1066 --CLYTLQGHTSCVRSVVF---SPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVR 1120
Query: 329 ----SNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGK 384
S + +A+ + + + R + + L + + +A D +A+ +G
Sbjct: 1121 FLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLAS-GSGD 1179
Query: 385 NKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSG 444
V LW SK ++++ Q S V G+ + G S V + I S
Sbjct: 1180 QTVRLWDISSSKC--LYIL-----QGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSS 1232
Query: 445 AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDN 503
++ GH V VV + ++ SG +D+TV++W + L + + N
Sbjct: 1233 KCLCTF-----QGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSS--KCLHTFQGHTN 1285
Query: 504 GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS 563
++ + + SMLA D TV + +I + + GH ++ FSPD L + S
Sbjct: 1286 WVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGS 1345
Query: 564 MDCTIRVWDIPSSQLIDCF 582
D T+R+W I S + + F
Sbjct: 1346 DDQTVRLWSISSGECLYTF 1364
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Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690) |
| >sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 216/550 (39%), Gaps = 72/550 (13%)
Query: 46 LFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVG 105
L + C G + N + + SP E +C + + N +++ R G+ +
Sbjct: 676 LLLICRGHS------NWVRFVVFSPDGEILASCGADE--------NVKLWSVRDGV-CIK 720
Query: 106 TYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS 163
T GH V + P G L S + +K+WDI+ L+ D W
Sbjct: 721 TLTGHEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTD--------WVR 772
Query: 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG 223
CV SP + + ++ I L ++ + L G V +++F DG + SG
Sbjct: 773 CVAF---SPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQ-TLASG 828
Query: 224 SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN 283
S + +WN + + H V + + +LV+ S D T+KLW D
Sbjct: 829 SGDRTIKIWNYHTGECL-KTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLW-----DCQ 882
Query: 284 GRL-LRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKN--------LG 334
+ ++ GH+ + F + + + D ++R++N ++ K L
Sbjct: 883 THICIKTLHGHTNEVCSVAFSPDG-QTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALP 941
Query: 335 IA-------SANRNNLKRKNRLEKMNEKFI--LPPVSQFSFGLAREKDWNNIAAIHTGKN 385
+A A+ +N K + K+I L + F +G+A D +A+ T +
Sbjct: 942 VAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASAST-DS 1000
Query: 386 KVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGA 445
V LW+ + + L A P G + G + V +NI +G
Sbjct: 1001 SVRLWNISTGQCFQILLEHTDWVYAVVFHPQ-------GKIIATGSADCTVKLWNISTGQ 1053
Query: 446 HRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPP--LRSIKLDN 503
+ H + G+ Q++ S DQ+V++W TG+ LR
Sbjct: 1054 CLKTLSE-----HSDKILGMAWSPDGQLLASASADQSVRLWDCC-TGRCVGILRGHSNRV 1107
Query: 504 GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS 563
+ F + E ++A C D TV I D ++ L+GH + D FSPD + L +AS
Sbjct: 1108 YSAIFSPNGE--IIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASAS 1165
Query: 564 MDCTIRVWDI 573
D T+R+WD+
Sbjct: 1166 HDQTVRIWDV 1175
|
Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690) |
| >sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1 | Back alignment and function description |
|---|
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 197/502 (39%), Gaps = 74/502 (14%)
Query: 89 SANNIIYAWRRGIDIVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLE 146
S + I W R + T GH V+ + P G + S + +K+W
Sbjct: 1091 SLDKTIKLWSRDGRLFRTLNGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQ--------- 1141
Query: 147 LSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGP 206
+ D K + VN + SP + S+ I L + + + LM
Sbjct: 1142 -TSDGTLLKTITGH-EQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAG 1199
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
V + F DG + +GS + +W+ +D ++ + H+ V F + L ++
Sbjct: 1200 VITVRFSPDGQ-TIAAGSEDKTVKLWHRQDGKLLKTLN-GHQDWVNSLSFSPDGKTLASA 1257
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFN- 323
S D T+KLW +G+L++ +GH+ + F SSD I SA+ D+T++++N
Sbjct: 1258 SADKTIKLWRI----ADGKLVKTLKGHNDSVWDVNF---SSDGKAIASASRDNTIKLWNR 1310
Query: 324 --TKSET-SNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAI 380
+ ET + + G+ + N LP +NI A
Sbjct: 1311 HGIELETFTGHSGGVYAVN-----------------FLPD--------------SNIIAS 1339
Query: 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFN 440
+ N + LW L+ A S V H G+ + + G++ ++
Sbjct: 1340 ASLDNTIRLW--------QRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWH 1391
Query: 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK 500
Q G+ + PG+ + G+ ++ S D+TVK+W + GK I
Sbjct: 1392 SQDGSLLKTL-----PGN-KAIYGISFTPQGDLIASANADKTVKIWRVRD-GKALKTLIG 1444
Query: 501 LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLI 560
DN ++ + LA D TV + ++ + L GH ++ FSPD + +
Sbjct: 1445 HDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIA 1504
Query: 561 TASMDCTIRVWDIPSSQLIDCF 582
+AS D TIR+WD S LI
Sbjct: 1505 SASADKTIRLWDSFSGNLIKSL 1526
|
Nostoc sp. (strain PCC 7120 / UTEX 2576) (taxid: 103690) |
| >sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 414 KPTCVYITHCGNFVLIGYSSGH-VDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472
+P + H G L Y G +DRF+ G RG + H++QP
Sbjct: 21 RPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQP---------------- 64
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532
+ +SGG+D +KVW++K T + + + I + H E+ + DD T+ I +
Sbjct: 65 LFVSGGDDYKIKVWNYK-THRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQ 123
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ T I L+GH + A F P +++AS+D T+RVWDI
Sbjct: 124 SRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
|
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q94A40|COPA1_ARATH Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 26/165 (15%)
Query: 414 KPTCVYITHCGNFVLIGYSSGH-VDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472
+P + H G L Y G +DRF+ G RG + H++QP
Sbjct: 21 RPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQP---------------- 64
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRT---HQESSMLAVCLDDFTVNI 528
+ +SGG+D +KVW++K R + L + + RT H E + DD T+ I
Sbjct: 65 LFVSGGDDYKIKVWNYKNH-----RCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
Query: 529 IDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ + T + L+GH + A F P +++AS+D T+RVWDI
Sbjct: 120 WNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
|
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9AUR7|COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica GN=Os03g0711500 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 76/167 (45%), Gaps = 26/167 (15%)
Query: 414 KPTCVYITHCGNFVLIGYSSGHV-DRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472
+P + H G + Y G + DRF+ G RG + H QP
Sbjct: 21 RPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQP---------------- 64
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRT---HQESSMLAVCLDDFTVNI 528
+ +SGG+D +KVW++K R + L + + RT H E + DD T+ I
Sbjct: 65 LFVSGGDDYKIKVWNYKTH-----RCLFTLHGHLDYIRTVQFHHECPWIVSASDDQTIRI 119
Query: 529 IDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575
+ + T + L+GH + A F P +++AS+D T+RVWDI +
Sbjct: 120 WNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDISA 166
|
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Oryza sativa subsp. japonica (taxid: 39947) |
| >sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica GN=Os03g0711400 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 26/165 (15%)
Query: 414 KPTCVYITHCGNFVLIGYSSGHV-DRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472
+P + H G + Y G + DRF+ G RG + H QP
Sbjct: 21 RPWILASLHSGVIQMWDYRMGTLLDRFDEHDGPVRGVHFHATQP---------------- 64
Query: 473 IVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRT---HQESSMLAVCLDDFTVNI 528
+ +SGG+D +KVW++K R + L + + RT H E + DD T+ I
Sbjct: 65 LFVSGGDDYKIKVWNYKTH-----RCLFTLHGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
Query: 529 IDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ + T + L+GH + A F P +++AS+D T+RVWDI
Sbjct: 120 WNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
|
The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. Oryza sativa subsp. japonica (taxid: 39947) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 583 | ||||||
| 91077436 | 892 | PREDICTED: similar to wd-repeat protein | 0.965 | 0.631 | 0.531 | 0.0 | |
| 380021442 | 888 | PREDICTED: WD repeat-containing protein | 0.969 | 0.636 | 0.523 | 0.0 | |
| 307181550 | 888 | WD repeat-containing protein 36 [Campono | 0.969 | 0.636 | 0.519 | 0.0 | |
| 307198013 | 892 | WD repeat-containing protein 36 [Harpegn | 0.969 | 0.633 | 0.519 | 0.0 | |
| 345489116 | 900 | PREDICTED: WD repeat-containing protein | 0.969 | 0.627 | 0.525 | 0.0 | |
| 332029378 | 888 | WD repeat-containing protein 36 [Acromyr | 0.969 | 0.636 | 0.514 | 0.0 | |
| 328782487 | 887 | PREDICTED: WD repeat-containing protein | 0.969 | 0.636 | 0.519 | 0.0 | |
| 383859020 | 888 | PREDICTED: WD repeat-containing protein | 0.969 | 0.636 | 0.511 | 1e-179 | |
| 322799961 | 889 | hypothetical protein SINV_11096 [Solenop | 0.969 | 0.635 | 0.507 | 1e-178 | |
| 350399578 | 888 | PREDICTED: WD repeat-containing protein | 0.969 | 0.636 | 0.504 | 1e-177 |
| >gi|91077436|ref|XP_966791.1| PREDICTED: similar to wd-repeat protein [Tribolium castaneum] gi|270001624|gb|EEZ98071.1| hypothetical protein TcasGA2_TC000478 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 665 bits (1716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/608 (53%), Positives = 418/608 (68%), Gaps = 45/608 (7%)
Query: 16 SKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDD 75
SKIFL R+LGYVSNH+P+ R+I+ RKE L VTCVGK+FH YG HF LLSV H +D
Sbjct: 5 SKIFLPCRSLGYVSNHIPLQVRYIKSRKENLIVTCVGKSFHTYGITHFGLLSVGGLHPED 64
Query: 76 ITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKV 135
IT +++D FH+YT+ NN IYAWRRG ++ Y+GH PVHL++PFG HLIS+DE S+VK+
Sbjct: 65 ITAMTADAFHVYTACNNEIYAWRRGTELKHVYRGHKKPVHLMMPFGAHLISIDEASSVKL 124
Query: 136 WDIKAEETYLELSFDNDTFKIMG----------------------------------KRW 161
WDIK E +LEL+F N TF I K W
Sbjct: 125 WDIKDESVFLELTFSNKTFHITTICHPSTYINKILLGSEQGEMQLWNVNNLKMIYSFKGW 184
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
NS + LE +P +D++ VGL+ KI LHN+ DE++MEF+Q WG VT++SFRTDG P+M
Sbjct: 185 NSPITCLEQAPAIDVVAVGLACGKIKLHNLKFDETIMEFMQDWGVVTSISFRTDGSPIMA 244
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
+GS GH+ W+LE+R+V +Q+ AH VTG L +EPL++TSSPDNTLKLWIFD++D
Sbjct: 245 TGSVIGHIVFWDLEERRVASQLLSAHDGSVTGMICLPSEPLILTSSPDNTLKLWIFDRSD 304
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341
G RLLRIREGHSAPP++++F+G + NILS AGDSTLRIFNT++E NK+LG AS NR
Sbjct: 305 GGARLLRIREGHSAPPSHLRFHGANGHNILSCAGDSTLRIFNTQTEQFNKSLGKASYNRK 364
Query: 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401
K++ R + + I+PP++QF+ + REK+W+NIAA+H G V+ WS+ K KM ++
Sbjct: 365 ASKKRGRTAE--DPLIMPPITQFTSEITREKEWDNIAAVHLGIPMVTTWSYDKVKMGELK 422
Query: 402 LVPERCKQAK-------QSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDN 454
L+PER + K TC+ +THCGNFVL+GYS+GH+DRFN+QSG R SYG
Sbjct: 423 LLPERFHKKKLVSSGFHDVAATCLCLTHCGNFVLVGYSTGHIDRFNMQSGIWRDSYGAPK 482
Query: 455 QPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQES 514
H VRGV +D LNQ+ ISG +D +K W FK G PL + LD ISFFR+H ES
Sbjct: 483 --AHDASVRGVTTDPLNQMTISGSSDCKIKFWKFKNKGANPLTVLTLDEPISFFRSHSES 540
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
SMLAV L+DF V ++DIDT I+RK GH Q+TDA FSPDSRWL+T+SMDC+IR WDIP
Sbjct: 541 SMLAVALEDFDVYVVDIDTRRIVRKFVGHTAQITDATFSPDSRWLVTSSMDCSIRTWDIP 600
Query: 575 SSQLIDCF 582
S L+D F
Sbjct: 601 SCHLVDEF 608
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|380021442|ref|XP_003694574.1| PREDICTED: WD repeat-containing protein 36 [Apis florea] | Back alignment and taxonomy information |
|---|
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/604 (52%), Positives = 412/604 (68%), Gaps = 39/604 (6%)
Query: 16 SKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDD 75
SKIFLR+RALGYVSNH+P++ R+I+RRKE L VTC G AFH Y C+HF LLSVS H +
Sbjct: 4 SKIFLRNRALGYVSNHIPLITRYIKRRKENLIVTCTGNAFHTYSCSHFTLLSVSGVHPGE 63
Query: 76 ITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKV 135
ITCL+ D +H+YT+ N+IYAWRRG +I TYKGH VH +LPFGPHL+SVDE SNVK+
Sbjct: 64 ITCLAGDVYHVYTACENVIYAWRRGSEIKHTYKGHDCTVHTLLPFGPHLVSVDENSNVKI 123
Query: 136 WDIKAEETYLELSFDNDTFKI--------------MGKR--------------------W 161
WDIK EE EL+F+N FKI G W
Sbjct: 124 WDIKTEELITELTFNNTHFKITTLMHPNTYINKVLFGSEQGQLQLWNLRILKSVYTFNGW 183
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
N+ V VLE +P +D++ +GL++ +IILHN+ DES+ E +Q WG +T++SFRTD P+M
Sbjct: 184 NTAVTVLEQAPAIDVVAIGLNDGRIILHNLKFDESIFELMQDWGCITSISFRTDEHPIMA 243
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
+GS GH+ WNLE R+VE+Q+ KAH +TG +L NEPLLV+SSPDN+LKLWIFD AD
Sbjct: 244 TGSLDGHIVFWNLEQRKVESQLHKAHFGAITGLKYLPNEPLLVSSSPDNSLKLWIFDLAD 303
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341
G GRLLRIRE HS PP I+FYGN +NI++ DS++R+F+T SE NK+LG AS NR
Sbjct: 304 GAGRLLRIREAHSEPPTIIRFYGNEGENIITGGSDSSVRLFSTVSEMLNKSLGRASFNRK 363
Query: 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401
K++ R + + +PP+++ + + REK+W+NI A H+G V+ WSF K++M +
Sbjct: 364 AAKKRGR--AVEDPLQMPPITEIAMEITREKEWDNIVATHSGLGTVTTWSFDKTRMGEYK 421
Query: 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG 461
L PE+ K + + +T CGNFV+IGYS+GHV+RFNIQSG HR SYG D + H G
Sbjct: 422 LFPEKFKGNHNITASSICLTKCGNFVVIGYSNGHVERFNIQSGIHRASYGTD-KGAHKGP 480
Query: 462 VRGVVSDNLNQIVISGGNDQTVKVWHFKQT--GKPPLRSIKLDNGISFFRTHQESSMLAV 519
V+GV+ D LNQ+VI+ G D +K W FK L + LD I + R H ESS++AV
Sbjct: 481 VKGVMVDPLNQVVITAGKDACIKYWSFKPKIGDTESLTKMILDEPIEWIRYHDESSLIAV 540
Query: 520 CLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
L+DF++ +ID+DT I+R+ GH G+LTDA F+PDSRWLITASMDCTI WDIPSS LI
Sbjct: 541 ALEDFSIVLIDLDTRKIVRRFEGHKGRLTDACFNPDSRWLITASMDCTICTWDIPSSNLI 600
Query: 580 DCFQ 583
D FQ
Sbjct: 601 DIFQ 604
|
Source: Apis florea Species: Apis florea Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307181550|gb|EFN69112.1| WD repeat-containing protein 36 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/604 (51%), Positives = 413/604 (68%), Gaps = 39/604 (6%)
Query: 16 SKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDD 75
S+IF R+RALGYVSNH+P+V R+I RRKE L VTCVG+ FH YGC HF LLSVS H DD
Sbjct: 4 SRIFARNRALGYVSNHIPLVTRYILRRKEHLLVTCVGREFHTYGCKHFTLLSVSGMHADD 63
Query: 76 ITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKV 135
ITCL++D FH+YT++ N IYAWRRG ++ TYKGH VH++LPFG HL+S+DE S +KV
Sbjct: 64 ITCLATDTFHVYTASANNIYAWRRGTELKHTYKGHDCAVHILLPFGAHLLSIDENSTLKV 123
Query: 136 WDIKAEETYLELSFDNDTFKIMG----------------------------------KRW 161
WDIK E LEL+F N+ FKI K W
Sbjct: 124 WDIKDESLILELNFSNNVFKITTLIHPNTYINKILLGSEQGQLQLWNIRSMKMIYTFKGW 183
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
S V LE +P +D++ +GL++ +IILHN+ DE+L E +Q WGPV +++FRTDG P+M
Sbjct: 184 QSSVTALEQAPAIDVVAIGLNDGRIILHNLKYDETLFELVQDWGPVISINFRTDGHPIMA 243
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
+GS G + WNLE R VE+Q+ AH VTG ++ NEPLLV+SSPDN+LKLWIFD AD
Sbjct: 244 TGSLGGQIVFWNLEQRTVESQLCHAHNAAVTGLRYIPNEPLLVSSSPDNSLKLWIFDMAD 303
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341
G GRLLRIREGH+ PP ++FYGN + IL+ GDS+LR+F+T +E NK+LG AS NR
Sbjct: 304 GAGRLLRIREGHAEPPTIVRFYGNDGNYILTTGGDSSLRLFSTVTEIMNKSLGRASFNRK 363
Query: 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401
K+K+ +++ ++PP+++ +F REK+W NIAA H+G V+ WS + KM D+
Sbjct: 364 ASKKKSL--SVDDPLLMPPITELAFEETREKEWCNIAATHSGLGVVTTWSSHLQKMGDLK 421
Query: 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG 461
L+PER K + T + +T CGNFV+IGY++GH+DRFNIQSG HR SYG +N H G
Sbjct: 422 LLPERFKNNYNASATSLCLTRCGNFVVIGYNTGHIDRFNIQSGIHRASYGDENG-AHEGP 480
Query: 462 VRGVVSDNLNQIVISGGNDQTVKVWHFKQ-TGKPPLRSI-KLDNGISFFRTHQESSMLAV 519
V+GV+ D+LNQ +IS G D +K W FK G R+I L+ I + R H E+S++AV
Sbjct: 481 VKGVMVDDLNQTLISAGRDAKIKFWDFKPGKGMTTARTILTLEESIEWIRYHNENSLVAV 540
Query: 520 CLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
L++F + ++D+DT I+R GH G++TDA F+PDSRWLITASMDCTIR WDIPSS LI
Sbjct: 541 ALENFDIVLMDLDTRKIVRHFRGHEGRVTDACFNPDSRWLITASMDCTIRTWDIPSSHLI 600
Query: 580 DCFQ 583
D FQ
Sbjct: 601 DIFQ 604
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307198013|gb|EFN79073.1| WD repeat-containing protein 36 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/606 (51%), Positives = 409/606 (67%), Gaps = 41/606 (6%)
Query: 16 SKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDD 75
SKIF R+RALGYVSNH+P++ R+I R+KE L VTC+G+AFH YGC HF LL+VS H DD
Sbjct: 4 SKIFARNRALGYVSNHIPLLTRYILRKKEHLIVTCIGRAFHTYGCKHFTLLTVSGLHPDD 63
Query: 76 ITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKV 135
IT +++D FH+YT++ N +YAWRRG D+ TYKGH PVHL+LPFG HL+SVDE SNV V
Sbjct: 64 ITAMATDTFHVYTASANNVYAWRRGTDLKHTYKGHKGPVHLLLPFGAHLLSVDEISNVIV 123
Query: 136 WDIKAEETYLELSFDNDTFKIMG----------------------------------KRW 161
WDIK E LEL+F N FKI K W
Sbjct: 124 WDIKEETMLLELNFSNTIFKITAMMHPNTYMNKILFGSKQGQLQLWNIKKAKMIYTFKGW 183
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
S + LE +P +D+ +GL N KIILHN+ DES+ + +Q WG V ++SFRTDG P+M
Sbjct: 184 GSSITALEQAPALDVAAIGLQNGKIILHNLKYDESIFDLMQDWGSVVSISFRTDGQPIMA 243
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
+GS GH+ WNLE R +ENQI + H VTG ++ NEP+LV+SS DN+LKLWIFD
Sbjct: 244 TGSPDGHIVFWNLEQRTMENQITQVHGAAVTGLKYIPNEPMLVSSSDDNSLKLWIFDTTG 303
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341
G GRLLRIREGH+ PP ++FYGN + +L+ GDS+LR+F+T +E NK+LG AS NR
Sbjct: 304 GAGRLLRIREGHAEPPRLVRFYGNDGNYLLTTGGDSSLRLFSTVTEILNKSLGKASFNRK 363
Query: 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401
KRK+RLE+ + I+PP+ S + REK+W N+AAIH VS WS Y KM ++
Sbjct: 364 ASKRKSRLEE--DTLIMPPIIDLSAEVTREKEWCNVAAIHFDLPVVSTWSTYLQKMGELK 421
Query: 402 LVPERCKQAKQSK--PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHV 459
LVPER ++ + T +YIT CGNFV+IGYS+GHVDRFNIQSG HR SYG D + H
Sbjct: 422 LVPERFQKNRNQNVTATSLYITKCGNFVVIGYSTGHVDRFNIQSGIHRASYG-DEKCAHK 480
Query: 460 GGVRGVVSDNLNQIVISGGNDQTVKVWHFK-QTGKPPLRSI-KLDNGISFFRTHQESSML 517
G VRGV+ D+L Q V++ G D+ +K W FK + R+I KL + + R H ESS++
Sbjct: 481 GAVRGVMVDDLMQTVMTAGQDKLIKFWDFKPKEDMTDARTIMKLKQSVQWIRYHNESSLV 540
Query: 518 AVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577
A+CL+++ + ++D+DT I+R GHM +TDA F+PDSRWLITASMDCTIR WDIPSS
Sbjct: 541 AMCLENYNIVLLDLDTRKIVRCFEGHMAPVTDACFNPDSRWLITASMDCTIRTWDIPSSH 600
Query: 578 LIDCFQ 583
+ID F+
Sbjct: 601 MIDIFE 606
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345489116|ref|XP_003426057.1| PREDICTED: WD repeat-containing protein 36 [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/605 (52%), Positives = 412/605 (68%), Gaps = 40/605 (6%)
Query: 16 SKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDD 75
SK+F R+RALGYVSNH+PVV R+I+RRKE L VTC G+ FH YGC+HF LLSVS H +D
Sbjct: 4 SKVFQRNRALGYVSNHIPVVTRYIQRRKENLIVTCTGRNFHTYGCSHFTLLSVSGAHPED 63
Query: 76 ITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKV 135
ITCLS+D +H+YT++ N IYAWRRG ++ TYKGH S VHL+LPFGPHL+S+DE SN+ +
Sbjct: 64 ITCLSADTYHVYTASGNKIYAWRRGNELKHTYKGHESQVHLLLPFGPHLVSIDEGSNLMI 123
Query: 136 WDIKAEETYLELSFDNDTFKI--------------MGKR--------------------W 161
WDIK EE E +F N+ FKI +G W
Sbjct: 124 WDIKTEEVVSESNFSNNVFKITALMHPNTYINKILLGSEQGQMQLWNIKLMKMIYTFSGW 183
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
N ++++E +P VD++ VGL + +IILHN+ D+++ E +Q WG VT++SFR+DG P+M
Sbjct: 184 NFSISIIEQAPAVDVVAVGLIDGRIILHNLKVDQTVFELVQDWGVVTSISFRSDGHPIMA 243
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
+GS GH+ +WNLE R+VE+QI AH VTG L NEPLLV+SSPDNTLKLWIFD AD
Sbjct: 244 TGSLQGHIVLWNLEQRKVESQILNAHFGSVTGLKCLPNEPLLVSSSPDNTLKLWIFDLAD 303
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341
G GRLLR+REGH+ PP I+FYGN NILS +GDS+LRIF+T++ET NK+LG AS NR
Sbjct: 304 GAGRLLRLREGHAEPPTVIRFYGNDGHNILSISGDSSLRIFSTQTETFNKSLGRASYNRK 363
Query: 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401
K+K R +++ I+P ++ + R+KDW+NIA H G V+ WS+ K KM +
Sbjct: 364 ASKKKGR--AVDDPLIMPQMTNIAAESTRDKDWDNIATTHLGLGVVTTWSYDKLKMGEHK 421
Query: 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG 461
L+PE+ K T V IT CGN+VL GY++GHV+RFNIQSG HR SYG D + H G
Sbjct: 422 LLPEKFKFNMNVTATTVTITQCGNYVLAGYNTGHVERFNIQSGVHRSSYGSD-KGAHEGP 480
Query: 462 VRGVVSDNLNQIVISGGNDQTVKVWHF---KQTGKPPLRSIKLDNGISFFRTHQESSMLA 518
V+G+ D LN +V++ G D VK W F K K P I + + + R H+E+S+LA
Sbjct: 481 VKGISVDCLNTVVVTAGRDGKVKFWPFQALKPNDKEPKTVIDVKESVEWLRAHRENSLLA 540
Query: 519 VCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
L DFT+ +ID+D I+R+ GH G+L DA FSPDSRWL+TASMD TIRVWDIPSSQL
Sbjct: 541 TALQDFTIVLIDVDMQRIVRRFEGHTGRLNDATFSPDSRWLVTASMDRTIRVWDIPSSQL 600
Query: 579 IDCFQ 583
ID FQ
Sbjct: 601 IDIFQ 605
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332029378|gb|EGI69333.1| WD repeat-containing protein 36 [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/604 (51%), Positives = 410/604 (67%), Gaps = 39/604 (6%)
Query: 16 SKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDD 75
S+IF R+RALGYVSNH+P++ R+I RRKE VTCVGK FH Y C HF LLSVS H DD
Sbjct: 4 SRIFARNRALGYVSNHVPLITRYIVRRKEHFIVTCVGKEFHTYTCKHFTLLSVSGTHIDD 63
Query: 76 ITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKV 135
ITCL++D FH+YT++ N IYAWRRG ++ TYKGH VH++LPFG HL+SVDE S VKV
Sbjct: 64 ITCLTTDTFHVYTASANNIYAWRRGTELKHTYKGHDCAVHILLPFGAHLLSVDESSTVKV 123
Query: 136 WDIKAEETYLELSFDNDTFKIMG----------------------------------KRW 161
WDIK E LEL+F N+ FKI K W
Sbjct: 124 WDIKEENLLLELNFSNNVFKITALMHPNTYMNKILLGSEQGQLQLWNIKATKMIYTFKGW 183
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
S V VLE +P +D+ +GL+N IILHN+ DE++ E +Q WGPV ++SFRTDG P+M
Sbjct: 184 QSSVTVLEQAPAIDVAAIGLNNGHIILHNLKYDETIFELVQDWGPVISISFRTDGHPIMA 243
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
+GS G + WNLE R VE+Q+ AH V G ++ NEPLLV+SSPDN+LKLWIFD AD
Sbjct: 244 TGSLGGQIVFWNLEQRMVESQLCNAHDAAVMGLRYIPNEPLLVSSSPDNSLKLWIFDMAD 303
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341
G GRLLRIREGH+ PP ++FYGN + +LS GDS+LR+F+T +E NK+LG AS NR
Sbjct: 304 GAGRLLRIREGHAEPPTIVRFYGNDGNYLLSTGGDSSLRLFSTVTEILNKSLGRASFNRK 363
Query: 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401
++K +++ ++PP++ + + REK+W NIAA+H+G V+ WS + KM D+
Sbjct: 364 ASRKKG--HSVDDPMLMPPITALASEVTREKEWCNIAAVHSGLGMVTTWSSHLQKMSDLK 421
Query: 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG 461
L+PER K + T +Y+T CGNFV+IGY++GHVDRFNIQSG HR SYG++N H G
Sbjct: 422 LLPERFKNNYNAIATSLYLTRCGNFVVIGYNTGHVDRFNIQSGIHRASYGNENG-AHEGP 480
Query: 462 VRGVVSDNLNQIVISGGNDQTVKVWHFK-QTGKPPLRSI-KLDNGISFFRTHQESSMLAV 519
V+GV+ D+LNQ +++ G D +K W FK + R+I ++ I + R H ESS++A+
Sbjct: 481 VKGVMVDDLNQTLVTAGKDAKIKFWDFKPKKDIITARTILTIEESIEWIRCHNESSLVAI 540
Query: 520 CLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
L++F + ++D+DT I+R GH G++TDA F+PDSRWLITASMDCTIR WDIPSS LI
Sbjct: 541 ALENFDIMLMDLDTRRIVRHFQGHEGRITDACFNPDSRWLITASMDCTIRTWDIPSSHLI 600
Query: 580 DCFQ 583
D FQ
Sbjct: 601 DIFQ 604
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328782487|ref|XP_394499.4| PREDICTED: WD repeat-containing protein 36-like [Apis mellifera] | Back alignment and taxonomy information |
|---|
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/604 (51%), Positives = 410/604 (67%), Gaps = 39/604 (6%)
Query: 16 SKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDD 75
SKIFLR+RALGYVSNH+P++ R+I+RRKE L VTC G AFH Y C+HF LLSVS H +
Sbjct: 4 SKIFLRNRALGYVSNHIPLITRYIKRRKENLIVTCTGNAFHTYSCSHFTLLSVSGVHPGE 63
Query: 76 ITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKV 135
ITCL+ D +H+YT+ N IYAWRRG +I YKGH VH +LPFGPHL+SVDE SNVK+
Sbjct: 64 ITCLAGDVYHVYTACENEIYAWRRGSEIKHIYKGHDCTVHTLLPFGPHLVSVDENSNVKI 123
Query: 136 WDIKAEETYLELSFDNDTFKI--------------MGKR--------------------W 161
WDIK EE EL+F+N FKI G W
Sbjct: 124 WDIKTEELITELTFNNTHFKITTLMHPNTYINKVLFGSEQGQLQLWNLRLLKSVYTFNGW 183
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
N+ + LE +P +D++ +GL++ +IILHN+ DES+ E +Q WG +T++SFRTD P+M
Sbjct: 184 NTAITALEQAPAIDVVAIGLNDGRIILHNLKFDESIFELMQDWGCITSISFRTDEHPIMA 243
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
+GS GH+ WNLE R+VE+Q+ KAH VTG +L NEPLLV+SSPDN+LKLWIFD AD
Sbjct: 244 TGSLDGHIVFWNLEQRKVESQLHKAHFGAVTGLKYLPNEPLLVSSSPDNSLKLWIFDLAD 303
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341
G GRLLRIRE HS PP I+FYGN +NI++A DS++R+F+T SE NK+LG AS NR
Sbjct: 304 GAGRLLRIREAHSEPPTIIRFYGNDGENIITAGSDSSVRLFSTISEMLNKSLGRASFNRK 363
Query: 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401
K++ R + + +PP+++ + + REK+W+NI A H+G V+ WSF K++M +
Sbjct: 364 AAKKRGR--AVEDPLQMPPITEIAMEVTREKEWDNIVATHSGLGTVTTWSFDKTRMGEYK 421
Query: 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG 461
L PE+ K + + +T CGNFV+IGYS+G+V+RFNIQSG HR SYG D + H G
Sbjct: 422 LFPEKFKGNHNITASSICLTKCGNFVVIGYSNGYVERFNIQSGIHRASYGTD-KGAHKGP 480
Query: 462 VRGVVSDNLNQIVISGGNDQTVKVWHFKQT--GKPPLRSIKLDNGISFFRTHQESSMLAV 519
V+GV+ D LNQ+VI+ G D +K W+FK L + LD I + R H ESS++AV
Sbjct: 481 VKGVMVDPLNQVVITAGKDTYIKYWNFKPKIGDTESLAKMILDEPIEWIRYHDESSLIAV 540
Query: 520 CLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
L+DF++ +ID DT I+R+ GH G+LTDA F+PDSRWLITASMDCTI WDIPSS LI
Sbjct: 541 ALEDFSIILIDFDTRKIVRRFEGHKGRLTDACFNPDSRWLITASMDCTICTWDIPSSNLI 600
Query: 580 DCFQ 583
D FQ
Sbjct: 601 DIFQ 604
|
Source: Apis mellifera Species: Apis mellifera Genus: Apis Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|383859020|ref|XP_003704996.1| PREDICTED: WD repeat-containing protein 36 [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 309/604 (51%), Positives = 412/604 (68%), Gaps = 39/604 (6%)
Query: 16 SKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDD 75
SKIF+++RALGYVSNH+P+V R+IR R E L VTC+G AF + H +LL++S H +
Sbjct: 4 SKIFVKNRALGYVSNHIPLVTRYIRVRHENLIVTCIGNAFVTFSATHLRLLAISGTHPGE 63
Query: 76 ITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKV 135
ITCL++D IYT+ N++YAW+RG ++ TYKGH VH +LPFGPHLISVDE S+VKV
Sbjct: 64 ITCLAADSLLIYTACRNVVYAWKRGTELKHTYKGHAHTVHSLLPFGPHLISVDENSDVKV 123
Query: 136 WDIKAEETYLELSFDNDTFKI--------------MGKR--------------------W 161
WDIK+EE LEL+F N+ FKI G W
Sbjct: 124 WDIKSEELVLELNFGNNIFKITTLMHPNTYLNKILFGSEQGQLQLWNLKLAKCIYTFNGW 183
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
+ V V+E +P VD++ +GL++ +IILHN+ DE++ + +Q WG V ++SFRTD P+M
Sbjct: 184 KAPVTVIEQAPAVDVVAIGLNDGRIILHNLKYDETVFDLVQDWGCVISISFRTDEHPIMA 243
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
+GS GH+ WNLE R+VE+Q++KAH VTG +L NEPLLV+SSPDN+LK+WIFD AD
Sbjct: 244 TGSLDGHIVFWNLEQRKVESQLQKAHYGAVTGLRYLPNEPLLVSSSPDNSLKMWIFDIAD 303
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341
G GRLLRIRE HS PP I+FYGN IL+A DS+LRIF+ SE N +LG AS NR
Sbjct: 304 GAGRLLRIREAHSEPPTAIRFYGNEGRTILTAGSDSSLRIFSIISEKFNHSLGRASFNRK 363
Query: 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401
K+K + + + ++PP++QF+ REK+W+NIAA H+G V+ WS+ K KM +
Sbjct: 364 ASKKKGK--GIEDPLLMPPITQFATETTREKEWDNIAATHSGLGTVTTWSYDKMKMGEYK 421
Query: 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG 461
L PE+ K + + VYIT CGNFVLIGY++GHV+RFNIQSG HR SYG++ + H G
Sbjct: 422 LFPEKFKGNRNVTASSVYITKCGNFVLIGYNTGHVERFNIQSGIHRASYGNE-KGAHQGP 480
Query: 462 VRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK--PPLRSIKLDNGISFFRTHQESSMLAV 519
V+G++ D+LN+ V++ G D +K W+FK + + PL + LD I + R H E+S+LA
Sbjct: 481 VKGIMVDSLNKFVVTAGKDTYLKFWNFKPSKENTEPLAKMILDEPIEWIRHHNENSLLAA 540
Query: 520 CLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
L+DFT+ +ID+DT IIR+ GH G+LTDA F+PDSRWLITASMD TIR WDIPSS LI
Sbjct: 541 ALEDFTIVLIDLDTRIIIRRFEGHEGRLTDACFNPDSRWLITASMDSTIRTWDIPSSNLI 600
Query: 580 DCFQ 583
D FQ
Sbjct: 601 DIFQ 604
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|322799961|gb|EFZ21087.1| hypothetical protein SINV_11096 [Solenopsis invicta] | Back alignment and taxonomy information |
|---|
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 307/605 (50%), Positives = 405/605 (66%), Gaps = 40/605 (6%)
Query: 16 SKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDD 75
SKIF R+RALGYVSN +P+V R+I RRKE L VTCVGK FH YGC HF L+SVS H DD
Sbjct: 4 SKIFARNRALGYVSNSVPLVTRYILRRKEHLIVTCVGKEFHTYGCKHFTLMSVSGTHPDD 63
Query: 76 ITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKV 135
ITCL +D FH+YT++ N I+AWRRG ++ TY+GH VH++LPFG HL+SVD S +KV
Sbjct: 64 ITCLVTDTFHVYTASANKIFAWRRGTELKHTYEGHDCTVHILLPFGAHLLSVDVNSTLKV 123
Query: 136 WDIKAEETYLELSFDNDTFKIMG----------------------------------KRW 161
W IK E LEL+F N F+I K W
Sbjct: 124 WSIKEESLLLELNFSNTIFRITALMHPNTYMNKILLGSEQGQLQLWNIKLPKMVHTFKGW 183
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
+ V LE +P +D+ +GL N +IILHN+ DE++ E +Q WGPV ++SFRTDG P+M
Sbjct: 184 QNSVMALEQAPAIDVAAIGLFNGRIILHNLKYDETIFELVQDWGPVISISFRTDGSPIMA 243
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
+GS +G + +WNLE R VE+Q+ KAH VTG ++ NEPLLV+SSPDN+LKLWIFD AD
Sbjct: 244 TGSMSGQIVLWNLEQRTVESQLCKAHNSSVTGLKYIPNEPLLVSSSPDNSLKLWIFDVAD 303
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341
G GRLLRIREGHS PP ++FYGN + +L+ GDS+LR+F+T +E NK+LG AS NR
Sbjct: 304 GAGRLLRIREGHSDPPTIVRFYGNDGNYLLTTGGDSSLRLFSTVTEIMNKSLGRASFNRK 363
Query: 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401
K+K +++ ++PP+++ + + REK+W NIAA H+G V+ WS + KM D+
Sbjct: 364 ASKKKGH--SVDDPMLMPPITELASEITREKEWCNIAATHSGLGMVTTWSSHLQKMGDLK 421
Query: 402 LVPERCKQ-AKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVG 460
L+PER K + T + +T CGNFV+IGYS+GHV+RFNIQSG HR SYG D H G
Sbjct: 422 LLPERFKSNSNFVTATTLCLTRCGNFVVIGYSTGHVERFNIQSGIHRASYG-DESGAHEG 480
Query: 461 GVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS--IKLDNGISFFRTHQESSMLA 518
V+GV+ D+LNQ +I+ G D +K W FK + + +++ I + R H ESS++A
Sbjct: 481 PVKGVMVDDLNQTLITAGKDAKIKFWDFKPKKDINMAKTILIMEDSIEWIRCHNESSLVA 540
Query: 519 VCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ L +F V ++D+DT I+R GH G++TDA F+PDSRWLITASMDCTIR WDIPSS L
Sbjct: 541 IALQNFDVMLMDVDTRKIVRHFQGHEGRVTDACFNPDSRWLITASMDCTIRTWDIPSSHL 600
Query: 579 IDCFQ 583
ID FQ
Sbjct: 601 IDIFQ 605
|
Source: Solenopsis invicta Species: Solenopsis invicta Genus: Solenopsis Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|350399578|ref|XP_003485576.1| PREDICTED: WD repeat-containing protein 36-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 305/604 (50%), Positives = 403/604 (66%), Gaps = 39/604 (6%)
Query: 16 SKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDD 75
SKIF ++RALGYVSNH+P++ R+I RRKE L TCVG F Y C HF LLS+S H +
Sbjct: 4 SKIFAKNRALGYVSNHIPLITRYITRRKENLISTCVGDTFLTYSCTHFTLLSISKTHPGE 63
Query: 76 ITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKV 135
ITCL+ D +H +T+ IYAWRRG ++ TYKGH VH++LPFGP+LISVDE +NVK+
Sbjct: 64 ITCLAGDPYHTFTACGKEIYAWRRGTELRHTYKGHNYTVHILLPFGPNLISVDENNNVKL 123
Query: 136 WDIKAEETYLELSFDNDTFKIMG----------------------------------KRW 161
WDI+ EE EL F + F I K W
Sbjct: 124 WDIRTEELITELDFSKNHFNITTIIHPNTYINKILFGSEQGQLQLWNLRVVKLIYTFKGW 183
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
N+ V LE +P +D+ +GL N +IILHN+ DE+L E +Q WG V ++SFRTD P+M
Sbjct: 184 NTPVTALEQAPAIDVAAIGLRNGRIILHNLKLDETLFELVQDWGCVISISFRTDEHPIMA 243
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
+GS GH+ WNLE R+VE+Q+ KAH + VTG +L NEPLLV+SS DN++KLWIFD AD
Sbjct: 244 TGSLDGHIVFWNLEQRKVESQLLKAHSRGVTGLKYLPNEPLLVSSSSDNSIKLWIFDLAD 303
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341
G GRLLRIREGH+ PPN ++FYGN + IL+A DS+LR+F+T +E NK+ G AS NR
Sbjct: 304 GAGRLLRIREGHAEPPNIVRFYGNDGNYILTAGNDSSLRMFSTITEMLNKSFGKASFNRK 363
Query: 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401
+++ RL + + ++PP++ F+ L REK+W+NIAA H+G VS WS K+KM +
Sbjct: 364 AARKRGRL--IEDPLLMPPITNFAIELTREKEWDNIAATHSGLATVSTWSSNKAKMGEHK 421
Query: 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG 461
L+ E K + TCV IT CG+FV+IGY+SGHV+RFNIQSG HR SYG D + H G
Sbjct: 422 LILENFKSNRNIIATCVCITKCGDFVIIGYNSGHVERFNIQSGIHRASYGID-KGAHQGP 480
Query: 462 VRGVVSDNLNQIVISGGNDQTVKVWHFKQT--GKPPLRSIKLDNGISFFRTHQESSMLAV 519
V+GV+ D LNQ VI+ G+D +K W FK G + + LD + + R H +SS++A+
Sbjct: 481 VKGVMVDPLNQTVITAGSDAFIKFWRFKPKTGGSESVTKMMLDEPVEWLRYHNDSSLIAI 540
Query: 520 CLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
L DFT+ ++D+DT I+R+ GH +LTDA F+PDSRWL+TASMDCTIR+WDIPSS LI
Sbjct: 541 ALQDFTIILLDLDTKRIVRRFKGHKARLTDACFNPDSRWLVTASMDCTIRIWDIPSSNLI 600
Query: 580 DCFQ 583
D FQ
Sbjct: 601 DIFQ 604
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 583 | ||||||
| FB|FBgn0038146 | 922 | CG9799 [Drosophila melanogaste | 0.713 | 0.451 | 0.481 | 1.3e-107 | |
| RGD|1586463 | 882 | Wdr36 "WD repeat domain 36" [R | 0.888 | 0.587 | 0.391 | 9.5e-105 | |
| UNIPROTKB|F1PNT8 | 891 | WDR36 "Uncharacterized protein | 0.917 | 0.600 | 0.391 | 8.6e-104 | |
| UNIPROTKB|F1RLI4 | 952 | WDR36 "Uncharacterized protein | 0.747 | 0.457 | 0.446 | 1.1e-103 | |
| UNIPROTKB|Q8NI36 | 951 | WDR36 "WD repeat-containing pr | 0.888 | 0.544 | 0.395 | 1.8e-103 | |
| ZFIN|ZDB-GENE-030131-464 | 904 | wdr36 "WD repeat domain 36" [D | 0.746 | 0.481 | 0.457 | 2.3e-103 | |
| UNIPROTKB|G3X6I6 | 948 | WDR36 "Uncharacterized protein | 0.747 | 0.459 | 0.448 | 2.9e-103 | |
| UNIPROTKB|F1NKR5 | 890 | WDR36 "Uncharacterized protein | 0.885 | 0.579 | 0.388 | 3.2e-102 | |
| TAIR|locus:2135393 | 910 | AT4G04940 "AT4G04940" [Arabido | 0.792 | 0.507 | 0.351 | 2.2e-73 | |
| POMBASE|SPCC1672.07 | 902 | SPCC1672.07 "U3 snoRNP-associa | 0.689 | 0.445 | 0.362 | 6.3e-69 |
| FB|FBgn0038146 CG9799 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 205/426 (48%), Positives = 296/426 (69%)
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
+S + +EPSP +D++ VG + IIL N+ DE LM F Q WG VT LSFRTDGPP++V
Sbjct: 203 DSRITCIEPSPALDVVAVGHGDGTIILLNLKFDEVLMSFQQDWGQVTNLSFRTDGPPILV 262
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281
S + G++ WNLE+R++ Q++ AH + VT A L +EP++ T+SPDN++++++FD D
Sbjct: 263 SACSNGYMAFWNLEERKLAGQLQ-AHEESVTTAICLPSEPVVFTTSPDNSMRMFVFDMPD 321
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAXXX 341
G R LRIREGH+ PP I+++G+S +ILS+ DST+R+F+T SE+ NK++G A+
Sbjct: 322 GGARQLRIREGHTKPPFCIRYHGSSGVSILSSGEDSTMRVFSTISESLNKSMGRATYNPK 381
Query: 342 XXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401
E ++KF +PP+ +F+ AREK+W+NIAAIH G + + WSF K++M +
Sbjct: 382 ATKKKNRFE--HDKFGMPPILEFTSDTAREKEWDNIAAIHAGVIQATTWSFGKNRMGEHR 439
Query: 402 LVPERCKQAK----QSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPG 457
LVP++ + + Q++ TC+ +THCGNFV+IGYSSG ++RFNIQSG HR +YG P
Sbjct: 440 LVPKQFQNSNRTNFQNETTCIVLTHCGNFVIIGYSSGDIERFNIQSGLHRATYG---SPA 496
Query: 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSML 517
H VRG+ SDNLNQ VISG ++ +K W FK PL +++L +GI+ R H+ESSML
Sbjct: 497 HKMAVRGLASDNLNQTVISGCSEGLLKFWSFKGKVDKPLATLRLADGIALIRLHRESSML 556
Query: 518 AVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577
A+ L+ F + ++D+ T I+RK GH +L D FSPDSRWLITA+MD TI+VWDIPSS
Sbjct: 557 AIGLETFKIFVVDMHTRVIVRKFVGHTAKLNDLTFSPDSRWLITAAMDSTIKVWDIPSSY 616
Query: 578 LIDCFQ 583
++D F+
Sbjct: 617 MVDHFR 622
|
|
| RGD|1586463 Wdr36 "WD repeat domain 36" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1037 (370.1 bits), Expect = 9.5e-105, P = 9.5e-105
Identities = 213/544 (39%), Positives = 326/544 (59%)
Query: 46 LFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYT-SANNIIYAWRRGID-- 102
L G F + N +++ H+ +I L H+ + ++++ W +
Sbjct: 82 LVFAAYGNVFSAFARNK-EIVHTFKGHKAEIHLLQPFGDHVISVDTDSVLIIWHIYSEEE 140
Query: 103 -IVGTYKGHTSPVHLILPFGPHLISV---DEESNVKVWDIKAEETYLELSFDNDTFKIMG 158
+ T+ + IL +L V E+ ++++W+IK+ + L + TF G
Sbjct: 141 YLQLTFDKSVFKISTILHPSTYLNKVLLGSEQGSLQLWNIKSNK----LLY---TFP--G 191
Query: 159 KRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPP 218
W V L+ +P VD++ +GL + ++++HNI DE+LM+F Q WGP+T++SFRTDG P
Sbjct: 192 --WKVGVTALQQAPAVDVVAIGLVSGQVVIHNIKFDETLMKFHQDWGPITSISFRTDGHP 249
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
+M +GS GH+ +W+LED+++ NQ++ AH ++G FL+ EPLLVT+ DN L++WIFD
Sbjct: 250 IMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAISGLTFLHREPLLVTNGADNALRIWIFD 309
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
G GRLLR+R GHSA I++YG + ILSA+ D TL+ F+T E NK+LG
Sbjct: 310 GPTGEGRLLRLRMGHSASLTKIRYYGQNGQQILSASQDGTLQSFSTVHEKFNKSLGHGLV 369
Query: 339 XXXXXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMD 398
M+ + LPP++QF+ AR+ DW+ + A H GK S W++ +S +
Sbjct: 370 NKKIVKRKGLQNTMSVR--LPPITQFAAEEARQSDWDGVIACHQGKLSCSTWNYQRSTIG 427
Query: 399 DMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGH 458
FL P+ K A + T V IT CGNF +IG SSG VD +N+QSG HRGS+G ++ H
Sbjct: 428 AYFLKPKNVK-ANSATATAVDITSCGNFAIIGLSSGAVDVYNMQSGIHRGSFG--DEKAH 484
Query: 459 VGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLA 518
G VRGV D LNQ+ I+ G+++ +K W+FK K + S+ LD+ + H++S +L
Sbjct: 485 AGSVRGVAVDGLNQLAITAGSERLLKFWNFKS--KVLVHSLSLDSPPNVMLLHRDSGILG 542
Query: 519 VCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ LDDF++ ++DI+T I+R+ SGH GQ+ D FSPD RWLI+A+MDC++R WD+PS L
Sbjct: 543 LALDDFSITVLDIETRKIVREFSGHQGQINDMTFSPDGRWLISAAMDCSVRTWDLPSGCL 602
Query: 579 IDCF 582
IDCF
Sbjct: 603 IDCF 606
|
|
| UNIPROTKB|F1PNT8 WDR36 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 220/562 (39%), Positives = 330/562 (58%)
Query: 28 VSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIY 87
VSN LP + +F G F + N +++ H+ +I L H+
Sbjct: 59 VSNSLPQDICCMAADGRLVFAA-YGNVFSAFARNK-EVVHTYKGHKAEIRLLQPFGDHVI 116
Query: 88 T-SANNIIYAWRRGID---IVGTYKGHTSPVHLILPFGPHLISV---DEESNVKVWDIKA 140
+ ++++ W + + T+ + IL +L + E+ +++W+IK+
Sbjct: 117 SVDTDSVLIIWHIYSEEEYLQLTFDKSVFKISAILHPSTYLNKILLGSEQGTLQLWNIKS 176
Query: 141 EETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEF 200
+ L + TF+ G W V L+ +P VD++ VGL++ ++I+HNI DE+LM+F
Sbjct: 177 NK----LLY---TFQ--G--WKFGVTALQQAPAVDVVAVGLTSGQVIIHNIKFDETLMKF 225
Query: 201 IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNE 260
Q WGP+T++SFRTDG P+M +GS GH+ +W+LED+++ NQ++ AH + G FL+ E
Sbjct: 226 RQDWGPITSISFRTDGHPIMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHRE 285
Query: 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLR 320
PLLVT+ DN L++WIFD G GRLLR R GHSAP I++YG + ILSA+ D TL+
Sbjct: 286 PLLVTNGADNALRIWIFDGPTGEGRLLRFRMGHSAPLTKIRYYGQNGQQILSASQDGTLQ 345
Query: 321 IFNTKSETSNKNLGIASAXXXXXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAI 380
F+T E NK+LG M+ + LPP+++F+ ARE DW++I A
Sbjct: 346 SFSTIHEKFNKSLGHGLINKKKVKRKGLQNAMSVR--LPPITKFAAEEARESDWDSIIAC 403
Query: 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFN 440
H GK S W++ +S + FL P+ K+ T V IT CGNF +IG SSG VD +N
Sbjct: 404 HQGKLSCSTWNYQRSTIGAYFLKPKELKK-DDITATAVDITSCGNFAVIGLSSGTVDVYN 462
Query: 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK 500
+QSG HRGS+G D H G VRGV D LNQ++I+ G++ +K W+FK K + S+
Sbjct: 463 MQSGIHRGSFGEDQ--AHKGSVRGVAVDGLNQLIITAGSEGLLKFWNFKN--KILIHSMS 518
Query: 501 LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLI 560
L + + H++S +L + LDDF++ ++DI+T I+R+ SGH GQ+ D FSPD RWLI
Sbjct: 519 LSSSPNMMLLHRDSGILGLALDDFSICVLDIETRKIVREFSGHQGQINDLAFSPDGRWLI 578
Query: 561 TASMDCTIRVWDIPSSQLIDCF 582
+ASMDC++R WD+PS LID F
Sbjct: 579 SASMDCSVRTWDLPSGCLIDSF 600
|
|
| UNIPROTKB|F1RLI4 WDR36 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1027 (366.6 bits), Expect = 1.1e-103, P = 1.1e-103
Identities = 203/455 (44%), Positives = 292/455 (64%)
Query: 129 EESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIIL 188
E+ ++++W++K+ + L + TF G W + V L+ +P VD++ VGL + ++I+
Sbjct: 225 EQGSLQLWNVKSNK----LLY---TFA--G--WKTGVTALQQAPAVDVVAVGLMSGQVII 273
Query: 189 HNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHR 248
HNI DE+LM+F Q WGP+T++SFRTDG P+M +GS GH+ +W+LED+++ NQ++ AH
Sbjct: 274 HNIKFDETLMKFRQDWGPITSISFRTDGHPVMAAGSPCGHIGLWDLEDKKLINQMRNAHS 333
Query: 249 KVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSD 308
+ G FL+ EPLLVT+ DN L++WIFD G GRLLR R GHSAP I++YG +
Sbjct: 334 TAIAGLTFLHREPLLVTNGADNALRIWIFDGPTGEGRLLRFRMGHSAPLTKIRYYGQNGQ 393
Query: 309 NILSAAGDSTLRIFNTKSETSNKNLGIASAXXXXXXXXXXXEKMNEKFILPPVSQFSFGL 368
ILSA+ D TL+ F+T E NK+LG M + LPP+++F+
Sbjct: 394 QILSASQDGTLQSFSTIHEKFNKSLGHGLINKKRVKRKGLQNAMTVR--LPPITEFAAEE 451
Query: 369 AREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVL 428
ARE DW+ I A H GK S W++ +S + FL P+ K+ T V IT CGNF +
Sbjct: 452 ARESDWDGIIACHQGKLSCSTWNYQRSTIGAYFLKPKELKK-DDITATAVDITSCGNFAV 510
Query: 429 IGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF 488
IG SSG +D +N+QSG HRGS+G D H G +RGV D LNQ+ IS G++ +K W+F
Sbjct: 511 IGLSSGTIDVYNMQSGIHRGSFGKDQ--AHKGSIRGVAVDGLNQLTISAGSEGLLKFWNF 568
Query: 489 KQTGKPPLRSIKLDNGISFFRTHQESS-MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQL 547
K K + S+ LD+ + H++SS +L + LDDF+++++DI+T I+R+ SGH GQ+
Sbjct: 569 KN--KILIHSVSLDSSPNMMLLHRDSSGILGLALDDFSISVLDIETRKIVREFSGHQGQI 626
Query: 548 TDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
D FSPD RWLI+ASMDC+IR WD+PS LID F
Sbjct: 627 NDMAFSPDGRWLISASMDCSIRTWDLPSGCLIDSF 661
|
|
| UNIPROTKB|Q8NI36 WDR36 "WD repeat-containing protein 36" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1025 (365.9 bits), Expect = 1.8e-103, P = 1.8e-103
Identities = 215/544 (39%), Positives = 321/544 (59%)
Query: 46 LFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYT-SANNIIYAWRRGID-- 102
L G F + N +++ H+ +I L HI + + I+ W +
Sbjct: 136 LVFAAYGNVFSAFARNK-EIVHTFKGHKAEIHFLQPFGDHIISVDTDGILIIWHIYSEEE 194
Query: 103 -IVGTYKGHTSPVHLILPFGPHLISV---DEESNVKVWDIKAEETYLELSFDNDTFKIMG 158
+ T+ + IL +L + E+ ++++W++K+ + L + TF G
Sbjct: 195 YLQLTFDKSVFKISAILHPSTYLNKILLGSEQGSLQLWNVKSNK----LLY---TFP--G 245
Query: 159 KRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPP 218
W V L+ +P VD++ +GL + ++I+HNI +E+LM+F Q WGP+T++SFRTDG P
Sbjct: 246 --WKVGVTALQQAPAVDVVAIGLMSGQVIIHNIKFNETLMKFRQDWGPITSISFRTDGHP 303
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
+M +GS GH+ +W+LED+++ NQ++ AH + G FL+ EPLLVT+ DN L++WIFD
Sbjct: 304 VMAAGSPCGHIGLWDLEDKKLINQMRNAHSTAIAGLTFLHREPLLVTNGADNALRIWIFD 363
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
G GRLLR R GHSAP I++YG + ILSA+ D TL+ F+T E NK+LG
Sbjct: 364 GPTGEGRLLRFRMGHSAPLTNIRYYGQNGQQILSASQDGTLQSFSTVHEKFNKSLGHGLI 423
Query: 339 XXXXXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMD 398
M+ + LPP+++F+ ARE DW+ I A H GK S W++ KS +
Sbjct: 424 NKKRVKRKGLQNTMSVR--LPPITKFAAEEARESDWDGIIACHQGKLSCSTWNYQKSTIG 481
Query: 399 DMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGH 458
FL P+ K+ T V IT CGNF +IG SSG VD +N+QSG HRGS+G D H
Sbjct: 482 AYFLKPKELKK-DDITATAVDITSCGNFAVIGLSSGTVDVYNMQSGIHRGSFGKDQ--AH 538
Query: 459 VGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLA 518
G VRGV D LNQ+ ++ G++ +K W+FK K + S+ L + + H++S +L
Sbjct: 539 KGSVRGVAVDGLNQLTVTTGSEGLLKFWNFKN--KILIHSVSLSSSPNIMLLHRDSGILG 596
Query: 519 VCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
+ LDDF+++++DI+T I+R+ SGH GQ+ D FSPD RWLI+A+MDC+IR WD+PS L
Sbjct: 597 LALDDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISAAMDCSIRTWDLPSGCL 656
Query: 579 IDCF 582
IDCF
Sbjct: 657 IDCF 660
|
|
| ZFIN|ZDB-GENE-030131-464 wdr36 "WD repeat domain 36" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 208/455 (45%), Positives = 286/455 (62%)
Query: 130 ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILH 189
+ ++++W+IK+ + L F TF G W++ V VL+ +P VD++GVGL++ +II+H
Sbjct: 178 QGSLQLWNIKSNK----LLF---TFS--G--WSAAVTVLQQTPAVDVVGVGLASGQIIIH 226
Query: 190 NILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRK 249
NI DE+LM+F Q WGP+TALSFRTDG P+M SGS GH+ +W+LE++++ +Q++ AH
Sbjct: 227 NIKFDETLMKFQQDWGPITALSFRTDGHPIMASGSPIGHIGLWDLEEKKLVSQMRDAHTT 286
Query: 250 VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN 309
+ G FL NEPLL+T+ DN +++WIFD A G+GRLLR R GHSAPP I+ Y S N
Sbjct: 287 AIAGLTFLQNEPLLITNGADNAIRVWIFDVAGGDGRLLRQRMGHSAPPTKIRHYDQSGLN 346
Query: 310 ILSAAGDSTLRIFNTKSETSNKNLGIASAXXXXXXXXXXXEKMNEKFILPPVSQFSFGLA 369
ILSA D TL+ F+T E NK+LG + + LP ++ F+ A
Sbjct: 347 ILSAGQDGTLQSFSTVHERFNKSLGHGTLNKAKAKKKGVKYDTAK---LPSITTFASETA 403
Query: 370 REKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSK--PTCVYITHCGNFV 427
R+ DW+ I A H G + W++ K M L PER + + T V I+ CGNF
Sbjct: 404 RQSDWDGIIACHRGFLMTTSWNYQKGSMGAHKLEPERFNRNRSLNVHATAVDISSCGNFA 463
Query: 428 LIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487
+I SSGH+D +N+QSG HRG YG D H G VRGV D LNQ+ S G D +K+W
Sbjct: 464 VIALSSGHIDVYNMQSGLHRGHYGEDK--AHEGPVRGVAVDALNQLTFSVGADHLLKIWK 521
Query: 488 FKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQL 547
FK K L + +L + H++S MLA+ LD F ++I+D++T I+RK SGH GQ+
Sbjct: 522 FKS--KEHLHTHRLPAAPASSLLHRDSGMLAIALDVFAIHILDVETRRIVRKFSGHRGQI 579
Query: 548 TDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
D FSPD RWLITASMDCTIR WD+PS L+DCF
Sbjct: 580 NDMTFSPDGRWLITASMDCTIRTWDLPSGSLVDCF 614
|
|
| UNIPROTKB|G3X6I6 WDR36 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1023 (365.2 bits), Expect = 2.9e-103, P = 2.9e-103
Identities = 204/455 (44%), Positives = 291/455 (63%)
Query: 129 EESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIIL 188
E+ ++++W++K+ + L + TF G W V L+ +P VD++ VGL + ++I+
Sbjct: 221 EQGSLQLWNVKSNK----LLY---TFA--G--WKVGVTALQQAPAVDVVAVGLMSGQVII 269
Query: 189 HNILTDESLMEFIQTWGPVTALSFRT-DGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAH 247
HNI DE+LM+F Q WGP+T++SFRT DG P+M +GS GH+ +W+LED+++ NQ++ AH
Sbjct: 270 HNIKFDETLMKFRQDWGPITSISFRTADGHPVMAAGSPCGHIGLWDLEDKKLINQMRNAH 329
Query: 248 RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSS 307
+ G FL+ EPLLVT+ DN L++WIFD G GRLLR R GHSAP I++YG +
Sbjct: 330 STAIAGLTFLHREPLLVTNGADNALRIWIFDGPAGEGRLLRFRMGHSAPLTRIRYYGQNG 389
Query: 308 DNILSAAGDSTLRIFNTKSETSNKNLGIASAXXXXXXXXXXXEKMNEKFILPPVSQFSFG 367
+ILSA+ D TL+ F+T E NK+LG M+ + LPPV++F+
Sbjct: 390 QHILSASQDGTLQSFSTVHEKFNKSLGHGLINKKRVKRKGLQNTMSVR--LPPVTEFAAE 447
Query: 368 LAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFV 427
ARE DW+ I A H GK S W++ +S + FL P K + T V IT CGNF
Sbjct: 448 EARESDWDGIVACHQGKLSCSTWNYQRSTIGAHFLRPAGLK-TDSTTATAVDITSCGNFA 506
Query: 428 LIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487
+IG SSG VD +N+QSG HRGS+G D H G VRGV D LNQ+ I+ G++ +K W+
Sbjct: 507 VIGLSSGAVDVYNMQSGIHRGSFGRDQ--AHKGSVRGVAVDGLNQLTITAGSEGVLKFWN 564
Query: 488 FKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQL 547
FK K + S+ LD+ + H++S +L + LDDF+++++DI+T I+R+ SGH GQ+
Sbjct: 565 FKN--KVLIHSVSLDSSPNLMLLHRDSGILGLALDDFSISVLDIETRKIVREFSGHQGQI 622
Query: 548 TDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
D FSPD RWLI+ASMDC+IR WD+PS LID F
Sbjct: 623 NDMTFSPDGRWLISASMDCSIRTWDLPSGCLIDSF 657
|
|
| UNIPROTKB|F1NKR5 WDR36 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 994 (355.0 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 213/548 (38%), Positives = 309/548 (56%)
Query: 46 LFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYT-SANNIIYAW-----RR 99
L G FH N +++ H+ I L HI + N++ W
Sbjct: 75 LIFASYGNVFHAIARNK-EVVHTYEGHKARIHLLQPFGDHIISVDVANVLIVWDIQSEEE 133
Query: 100 GIDIVGTYKGHTSPVHLILPFGPHLISV---DEESNVKVWDIKAEETYLELSFDNDTFKI 156
+ +V + T V IL +L + E+ +++W+I++ + L SF
Sbjct: 134 YLQVV--FDKATFAVSAILHPSTYLNKILLGSEQGGLQLWNIRSNK--LLYSFPG----- 184
Query: 157 MGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDG 216
W V L +P VD+I VGL + II+HNI DE+LM+F Q WGP+TA+SFRTDG
Sbjct: 185 ----WGLGVTTLAQAPAVDVIAVGLVSGHIIIHNIKFDETLMKFQQDWGPITAISFRTDG 240
Query: 217 PPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWI 276
P+M +GS GH+ +W+LE++++ +Q++ AH V G F+ EPLL+T+ DN +++WI
Sbjct: 241 HPVMAAGSPVGHIALWDLEEKKLMSQMRNAHSTAVAGMSFVPGEPLLITNGADNAIRVWI 300
Query: 277 FDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIA 336
FD G GR+LR R GHSAPP I+++G + + ILSA D TL+ F+T E NK+LG
Sbjct: 301 FDGPGGTGRVLRSRMGHSAPPTKIRYHGQNGEQILSAGQDGTLQSFSTVHERFNKSLGRG 360
Query: 337 SAXXXXXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSK 396
S ++ LPP++ F+ +A + DW+ I A H G + W++ K+
Sbjct: 361 SINKKKSKKKGL---QHDTMALPPITAFASEVAHQNDWDGIIACHQGYITCTTWNYQKTS 417
Query: 397 MDDMFLVPERCKQAKQSK--PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDN 454
M L PE + K T V IT CGNF +IG S+G VD +N+QSG HRG YG +
Sbjct: 418 MGAHKLRPEEFSKNKPIDIYATAVDITTCGNFAVIGMSTGQVDVYNMQSGIHRGRYGREK 477
Query: 455 QPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQES 514
H G +RGV D LNQ+ I+ G+D +K W FK K + S L + S H++S
Sbjct: 478 --AHEGSIRGVAVDGLNQLTITAGSDGLIKFWKFK--AKDLVHSTDLSSSPSGILLHRDS 533
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
+L + DDF+++++DI+T I+RK SGH G++ D FSPD RWLIT+SMDCTI+ WD+P
Sbjct: 534 GILGIAFDDFSISVLDIETWKIVRKFSGHHGRINDMTFSPDGRWLITSSMDCTIKTWDLP 593
Query: 575 SSQLIDCF 582
S LIDCF
Sbjct: 594 SGCLIDCF 601
|
|
| TAIR|locus:2135393 AT4G04940 "AT4G04940" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 173/492 (35%), Positives = 270/492 (54%)
Query: 104 VGTYKG---HTSPV---HLILPFGP-HLISVDEESNVKVWDIKAEETYLELSFDNDTFKI 156
+ +KG H +P+ L F P ++ D N KV + ++E L+L ++ +T K+
Sbjct: 117 IWAFKGIEEHLAPIGNLQLTGKFTPTSIVHPDTYLN-KVL-VGSQEGPLQL-WNINTKKM 173
Query: 157 MG--KRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQ-TWGPVTALSFR 213
+ K W S V SP +D++ +G ++ KI +HNI DE ++ F + G VTALSF
Sbjct: 174 LYQFKGWGSSVTSCVSSPALDVVAIGCADGKIHVHNIKLDEEIVTFEHASRGAVTALSFS 233
Query: 214 TDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLK 273
TDG P++ SG + G +++WNL +++++ I+ AH + +FL NEP+L+++S DN+LK
Sbjct: 234 TDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFLANEPVLMSASADNSLK 293
Query: 274 LWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
+WIFD DG+ RLLR R GHSAPP I+FY N +ILSA D R+F+ E ++ L
Sbjct: 294 MWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNGR-HILSAGQDRAFRLFSVIQEQQSREL 352
Query: 334 GIASAXXXXXXXXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFY 393
E++ L PV F RE+DW N+ H + +W
Sbjct: 353 SQRHISRRAKKLRLKEEELK----LKPVVSFDCAEIRERDWCNVVTCHMDTAEAYVWRLQ 408
Query: 394 KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY--- 450
+ + L P C + C I+ CGNF ++G + G ++RFN+QSG RGSY
Sbjct: 409 NFVLGEHILKP--CPENPTPIKACA-ISACGNFAVVGTAGGWIERFNLQSGISRGSYFDM 465
Query: 451 GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRT 510
+ H G V GV D+ N ++IS G +KVW FK K L+S + D G S +
Sbjct: 466 SEKRRYAHDGEVIGVACDSTNTLMISAGYHGDLKVWDFK---KRELKS-QWDVGCSLVKI 521
Query: 511 --HQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
H+ + +LA DDF + + D+ T ++R+ GH ++TD FS D +W+I++SMD ++
Sbjct: 522 VYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSL 581
Query: 569 RVWDIPSSQLID 580
R+WD+ ++ ID
Sbjct: 582 RIWDVILAKQID 593
|
|
| POMBASE|SPCC1672.07 SPCC1672.07 "U3 snoRNP-associated protein Utp21 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 151/416 (36%), Positives = 229/416 (55%)
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS 224
+ L +PV+D++ VG + +I++ N+ LMEF Q G V + SFRTDG P++ S +
Sbjct: 207 ITSLTQAPVLDVLAVGTISGRIVIFNLKNGSILMEFKQD-GQVLSCSFRTDGTPILASSN 265
Query: 225 NTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNG 284
G L+ W+L R+++N AH + FL +P+LVT+ PDN+LK WIFD DG
Sbjct: 266 PIGDLSFWDLSKRRIQNVTYNAHFGSLPKIQFLNGQPILVTAGPDNSLKEWIFDSMDGAP 325
Query: 285 RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAXXXXXX 344
R+LR R GH PP++++FYG S ++SAA D +LR + ++ + L S
Sbjct: 326 RILRSRNGHYEPPSFVKFYGKSVHFLISAATDRSLRAVSLYQDSQSTELSQGSVISKAKK 385
Query: 345 XXXXXEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVP 404
E++ LP ++ S REK W+N+ H + W+ +KSK ++P
Sbjct: 386 LNVRPEELK----LPEITALSSSNTREKYWDNVLTAHKNDSSARTWN-WKSKTLGQHVLP 440
Query: 405 ERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRG 464
+ CV + CGNF LIG S G VD +N+QSG R S+G + G V
Sbjct: 441 T--SDGTSVRSVCV--SCCGNFGLIGSSKGVVDVYNMQSGIKRKSFGQSSLSGKP--VTA 494
Query: 465 VVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDF 524
V+ DN+N+I+++ D +K W F + + S+ + + I+ S ++AV DDF
Sbjct: 495 VMLDNVNRILVTASLDGILKFWDFNKGNL--IDSLDVGSSITHAIYQHSSDLVAVACDDF 552
Query: 525 TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLID 580
+ I+D+ T I+R+L GH +LT DFS RWL+TAS+D TIR WD+P+ LID
Sbjct: 553 GIRIVDVQTRKIVRELWGHSNRLTSFDFSDTGRWLVTASLDGTIRTWDLPTGHLID 608
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8NI36 | WDR36_HUMAN | No assigned EC number | 0.4162 | 0.9845 | 0.6035 | yes | N/A |
| O14053 | YC47_SCHPO | No assigned EC number | 0.3322 | 0.9399 | 0.6075 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 583 | |||
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 8e-21 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-19 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 5e-18 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 6e-18 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 8e-17 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 3e-14 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 5e-13 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-12 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 4e-12 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-09 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 2e-08 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 6e-08 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 7e-08 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 92.4 bits (230), Expect = 8e-21
Identities = 62/270 (22%), Positives = 110/270 (40%), Gaps = 28/270 (10%)
Query: 72 HEDDITCL--SSDFFHIYT-SANNIIYAWR-RGIDIVGTYKGHTSPVHLIL--PFGPHLI 125
H +TC+ S D + T S + I W +++ T KGHT PV + G +L
Sbjct: 8 HTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLA 67
Query: 126 SVDEESNVKVWDIKAEETYLELSFDNDTFKIMG--KRWNSCVNVLEPSPVVDIIGVGLSN 183
S + +++WD++ E + G +S SP I+ +
Sbjct: 68 SGSSDKTIRLWDLETGEC---------VRTLTGHTSYVSSVA----FSPDGRILSSSSRD 114
Query: 184 KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI 243
K I + ++ T + L V +++F DG + S S G + +W+L + +
Sbjct: 115 KTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGT-FVASSSQDGTIKLWDLRTGKCVATL 173
Query: 244 KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY 303
H V F + L++SS D T+KLW G+ L GH N + F
Sbjct: 174 T-GHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLST----GKCLGTLRGHENGVNSVAFS 228
Query: 304 GNSSDNILSAAGDSTLRIFNTKSETSNKNL 333
+ + S + D T+R+++ ++ + L
Sbjct: 229 PD-GYLLASGSEDGTIRVWDLRTGECVQTL 257
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 88.2 bits (219), Expect = 2e-19
Identities = 42/201 (20%), Positives = 83/201 (41%), Gaps = 17/201 (8%)
Query: 385 NKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSG 444
+ +W + + K G ++ G S + +++++G
Sbjct: 31 GTIKVWDL------ETGELLRTLKGHTGPVRDVAASAD-GTYLASGSSDKTIRLWDLETG 83
Query: 445 AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP--PLRSIKLD 502
+ GH V V +I+ S D+T+KVW +TGK LR
Sbjct: 84 ECVRTLT-----GHTSYVSSVAFSPDGRILSSSSRDKTIKVWDV-ETGKCLTTLRGHT-- 135
Query: 503 NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITA 562
+ ++ + + +A D T+ + D+ T + L+GH G++ FSPD L+++
Sbjct: 136 DWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSS 195
Query: 563 SMDCTIRVWDIPSSQLIDCFQ 583
S D TI++WD+ + + + +
Sbjct: 196 SSDGTIKLWDLSTGKCLGTLR 216
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 86.7 bits (213), Expect = 5e-18
Identities = 94/423 (22%), Positives = 177/423 (41%), Gaps = 45/423 (10%)
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQT--WGPVTALSFRT-DGPPMMV 221
+ + SP +++ G S+ I L ++ E L++ ++ V+ L+ + DG +++
Sbjct: 68 ITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILL 127
Query: 222 SGSNT-GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP-DNTLKLWIFDK 279
+ S+ G + +W+L + + H + VT F + LL + S D T+KLW
Sbjct: 128 ASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRT 187
Query: 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAN 339
G+ L GH+ P + + F + I S + D T+R+++ +
Sbjct: 188 ----GKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLST------------- 230
Query: 340 RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399
L VS FS D + +A+ + + LW S
Sbjct: 231 ------GKLLRSTLSGHSDSVVSSFS------PDGSLLASG-SSDGTIRLWDLRSSSSLL 277
Query: 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHV 459
L S V + G + G S G V +++++G S G V
Sbjct: 278 RTL------SGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPV 331
Query: 460 GGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAV 519
+ S + + +V G +D T+++W + PL++++ + + + +++
Sbjct: 332 SSLS--FSPDGSLLVSGGSDDGTIRLWDLRT--GKPLKTLEGHSNVLSVSFSPDGRVVSS 387
Query: 520 CLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
D TV + D+ T +++R L GH ++T DFSPD + L + S D TIR+WD+ +S
Sbjct: 388 GSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKTSLKS 447
Query: 580 DCF 582
F
Sbjct: 448 VSF 450
|
Length = 466 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 84.3 bits (209), Expect = 6e-18
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM 516
GH GGV V +++ +G D T+KVW +TG+ + + +
Sbjct: 7 GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDL-ETGELLRTLKGHTGPVRDVAASADGTY 65
Query: 517 LAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576
LA D T+ + D++T +R L+GH ++ FSPD R L ++S D TI+VWD+ +
Sbjct: 66 LASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG 125
Query: 577 QLIDCFQ 583
+ + +
Sbjct: 126 KCLTTLR 132
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 8e-17
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 416 TCVYITHCGNFVLIGYSSGHVDR----FNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN 471
V + G FV +S D +++++G + GH G V V
Sbjct: 139 NSVAFSPDGTFV----ASSSQDGTIKLWDLRTGKCVATL-----TGHTGEVNSVAFSPDG 189
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKL----DNGISFFRTHQESSMLAVCLDDFTVN 527
+ ++S +D T+K+W TGK + +NG++ + +LA +D T+
Sbjct: 190 EKLLSSSSDGTIKLWDL-STGK----CLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIR 244
Query: 528 IIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ D+ T ++ LSGH +T +SPD + L + S D TIR+WD
Sbjct: 245 VWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 73.1 bits (180), Expect = 3e-14
Identities = 34/129 (26%), Positives = 53/129 (41%), Gaps = 3/129 (2%)
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL-DNGISFFRTHQES 514
GH V V V S D T+K+W + TGK + ++ ++ +
Sbjct: 132 RGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLR-TGKC-VATLTGHTGEVNSVAFSPDG 189
Query: 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
L D T+ + D+ T + L GH + FSPD L + S D TIRVWD+
Sbjct: 190 EKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLR 249
Query: 575 SSQLIDCFQ 583
+ + +
Sbjct: 250 TGECVQTLS 258
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 5e-13
Identities = 60/325 (18%), Positives = 121/325 (37%), Gaps = 51/325 (15%)
Query: 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS 224
V + SP ++ G + I + ++ T E L GPV ++ DG + SGS
Sbjct: 12 VTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGT-YLASGS 70
Query: 225 NTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNG 284
+ + +W+LE + + H V+ F + +L +SS D T+K+W + G
Sbjct: 71 SDKTIRLWDLETGECVRTLT-GHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVE----TG 125
Query: 285 RLLRIREGHSAPPNYIQFYGNSSDN--ILSAAGDSTLRIFNTKSETSNKNLGIASANRNN 342
+ L GH+ N + F S D + S++ D T+++++ ++ L
Sbjct: 126 KCLTTLRGHTDWVNSVAF---SPDGTFVASSSQDGTIKLWDLRTGKCVATL--------- 173
Query: 343 LKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFL 402
+ + +A D + + + + LW K
Sbjct: 174 --------TGHTGEV--------NSVAFSPDGEKLLS-SSSDGTIKLWDLSTGKCLGTL- 215
Query: 403 VPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQPGHVGG 461
+ ++ V + G + G G + +++++G + GH N
Sbjct: 216 ------RGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTN------S 263
Query: 462 VRGVVSDNLNQIVISGGNDQTVKVW 486
V + + + SG D T+++W
Sbjct: 264 VTSLAWSPDGKRLASGSADGTIRIW 288
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 2e-12
Identities = 57/258 (22%), Positives = 104/258 (40%), Gaps = 24/258 (9%)
Query: 72 HEDDITCLSSDFFHIY---TSANNIIYAWR-RGIDIVGTYKGHTSPVH--LILPFGPHLI 125
H + +++ Y S++ I W + V T GHTS V P G L
Sbjct: 50 HTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILS 109
Query: 126 SVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKK 185
S + +KVWD++ + L D VN + SP + +
Sbjct: 110 SSSRDKTIKVWDVETGKCLTTLRGHTDW-----------VNSVAFSPDGTFVASSSQDGT 158
Query: 186 IILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKK 245
I L ++ T + + G V +++F DG + +S S+ G + +W+L + ++
Sbjct: 159 IKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKL-LSSSSDGTIKLWDLSTGKCLGTLR- 216
Query: 246 AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGN 305
H V F + LL + S D T+++W D G ++ GH+ + + +
Sbjct: 217 GHENGVNSVAFSPDGYLLASGSEDGTIRVW--DLR--TGECVQTLSGHTNSVTSLAWSPD 272
Query: 306 SSDNILSAAGDSTLRIFN 323
+ S + D T+RI++
Sbjct: 273 GKR-LASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 66.6 bits (163), Expect = 4e-12
Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 21/212 (9%)
Query: 71 QHEDDITCLS-SDFFHIYTSANN----IIYAWRRGIDIVGTYKGHTSPVH--LILPFGPH 123
H ++ ++ S I +S++ ++ G + T +GHT V+ P G
Sbjct: 91 GHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG-KCLTTLRGHTDWVNSVAFSPDGTF 149
Query: 124 LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN 183
+ S ++ +K+WD++ + T VN + SP + + S+
Sbjct: 150 VASSSQDGTIKLWDLRTGKC-------VATLTGH----TGEVNSVAFSPDGEKLLSSSSD 198
Query: 184 KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI 243
I L ++ T + L V +++F DG ++ SGS G + VW+L + +
Sbjct: 199 GTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGY-LLASGSEDGTIRVWDLRTGECVQTL 257
Query: 244 KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
H VT + + L + S D T+++W
Sbjct: 258 S-GHTNSVTSLAWSPDGKRLASGSADGTIRIW 288
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 59.7 bits (145), Expect = 1e-09
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304
K H VT F + LL T S D T+K+W + G LLR +GH+ P +
Sbjct: 6 KGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLE----TGELLRTLKGHTGPVRDVAASA 61
Query: 305 NSSDNILSAAGDSTLRIFNTKSE 327
+ + S + D T+R+++ ++
Sbjct: 62 D-GTYLASGSSDKTIRLWDLETG 83
|
Length = 289 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 49.7 bits (119), Expect = 2e-08
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++R L GH G +T FSPD L + S D T+RVWD
Sbjct: 1 GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 6e-08
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 533 TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
+ +++ L GH G +T FSPD ++L + S D TI++WD
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 7e-08
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 537 IRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
R L GH G +T FSPD + L T S D TI+VWD+ + +L+ +
Sbjct: 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLK 48
|
Length = 289 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 583 | |||
| KOG1539|consensus | 910 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0319|consensus | 775 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0271|consensus | 480 | 100.0 | ||
| KOG0318|consensus | 603 | 100.0 | ||
| KOG0306|consensus | 888 | 100.0 | ||
| KOG0306|consensus | 888 | 100.0 | ||
| KOG0291|consensus | 893 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0272|consensus | 459 | 100.0 | ||
| KOG0286|consensus | 343 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0296|consensus | 399 | 100.0 | ||
| KOG0279|consensus | 315 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG0315|consensus | 311 | 100.0 | ||
| KOG1063|consensus | 764 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG0273|consensus | 524 | 100.0 | ||
| KOG1408|consensus | 1080 | 100.0 | ||
| KOG0276|consensus | 794 | 100.0 | ||
| KOG0296|consensus | 399 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0276|consensus | 794 | 100.0 | ||
| KOG1539|consensus | 910 | 100.0 | ||
| KOG2048|consensus | 691 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| KOG0295|consensus | 406 | 100.0 | ||
| KOG0645|consensus | 312 | 100.0 | ||
| KOG0265|consensus | 338 | 100.0 | ||
| KOG2106|consensus | 626 | 100.0 | ||
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0284|consensus | 464 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0285|consensus | 460 | 100.0 | ||
| KOG0281|consensus | 499 | 100.0 | ||
| KOG0282|consensus | 503 | 100.0 | ||
| KOG1063|consensus | 764 | 100.0 | ||
| KOG0292|consensus | 1202 | 100.0 | ||
| KOG0293|consensus | 519 | 100.0 | ||
| KOG1408|consensus | 1080 | 100.0 | ||
| KOG0278|consensus | 334 | 100.0 | ||
| KOG0281|consensus | 499 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0266|consensus | 456 | 100.0 | ||
| KOG0263|consensus | 707 | 100.0 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0266|consensus | 456 | 100.0 | ||
| KOG0282|consensus | 503 | 100.0 | ||
| KOG2106|consensus | 626 | 100.0 | ||
| KOG0293|consensus | 519 | 100.0 | ||
| KOG0316|consensus | 307 | 100.0 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0275|consensus | 508 | 100.0 | ||
| KOG0316|consensus | 307 | 100.0 | ||
| KOG0275|consensus | 508 | 100.0 | ||
| KOG0643|consensus | 327 | 100.0 | ||
| KOG0313|consensus | 423 | 100.0 | ||
| KOG0643|consensus | 327 | 100.0 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0313|consensus | 423 | 100.0 | ||
| KOG0278|consensus | 334 | 100.0 | ||
| KOG2048|consensus | 691 | 100.0 | ||
| KOG1446|consensus | 311 | 100.0 | ||
| KOG0288|consensus | 459 | 100.0 | ||
| KOG0310|consensus | 487 | 100.0 | ||
| KOG1407|consensus | 313 | 100.0 | ||
| KOG0274|consensus | 537 | 100.0 | ||
| KOG0277|consensus | 311 | 100.0 | ||
| KOG1407|consensus | 313 | 100.0 | ||
| KOG0305|consensus | 484 | 100.0 | ||
| KOG0305|consensus | 484 | 100.0 | ||
| KOG0277|consensus | 311 | 100.0 | ||
| KOG0772|consensus | 641 | 100.0 | ||
| KOG0274|consensus | 537 | 100.0 | ||
| KOG1446|consensus | 311 | 100.0 | ||
| KOG0300|consensus | 481 | 100.0 | ||
| KOG0640|consensus | 430 | 100.0 | ||
| KOG0310|consensus | 487 | 100.0 | ||
| KOG0289|consensus | 506 | 100.0 | ||
| KOG0300|consensus | 481 | 100.0 | ||
| KOG0289|consensus | 506 | 100.0 | ||
| KOG0268|consensus | 433 | 100.0 | ||
| KOG0640|consensus | 430 | 100.0 | ||
| KOG0268|consensus | 433 | 100.0 | ||
| KOG0299|consensus | 479 | 100.0 | ||
| KOG0288|consensus | 459 | 100.0 | ||
| KOG0308|consensus | 735 | 100.0 | ||
| KOG0294|consensus | 362 | 100.0 | ||
| KOG0772|consensus | 641 | 100.0 | ||
| KOG0283|consensus | 712 | 100.0 | ||
| KOG0308|consensus | 735 | 100.0 | ||
| KOG0973|consensus | 942 | 100.0 | ||
| KOG0283|consensus | 712 | 99.98 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.97 | |
| KOG0647|consensus | 347 | 99.97 | ||
| KOG0646|consensus | 476 | 99.97 | ||
| KOG0294|consensus | 362 | 99.97 | ||
| KOG0973|consensus | 942 | 99.97 | ||
| KOG0299|consensus | 479 | 99.97 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.97 | |
| PTZ00420 | 568 | coronin; Provisional | 99.97 | |
| KOG0641|consensus | 350 | 99.97 | ||
| KOG0301|consensus | 745 | 99.97 | ||
| KOG2096|consensus | 420 | 99.97 | ||
| KOG0646|consensus | 476 | 99.97 | ||
| KOG0301|consensus | 745 | 99.97 | ||
| KOG2096|consensus | 420 | 99.97 | ||
| KOG1445|consensus | 1012 | 99.97 | ||
| KOG0647|consensus | 347 | 99.97 | ||
| KOG1036|consensus | 323 | 99.97 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.97 | |
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.97 | |
| KOG4283|consensus | 397 | 99.96 | ||
| KOG1036|consensus | 323 | 99.96 | ||
| KOG0639|consensus | 705 | 99.96 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.96 | |
| KOG1332|consensus | 299 | 99.96 | ||
| KOG0264|consensus | 422 | 99.96 | ||
| KOG1963|consensus | 792 | 99.96 | ||
| KOG0641|consensus | 350 | 99.96 | ||
| KOG1445|consensus | 1012 | 99.96 | ||
| KOG0639|consensus | 705 | 99.96 | ||
| KOG4283|consensus | 397 | 99.96 | ||
| KOG0264|consensus | 422 | 99.96 | ||
| KOG1273|consensus | 405 | 99.96 | ||
| KOG1332|consensus | 299 | 99.96 | ||
| KOG2055|consensus | 514 | 99.96 | ||
| KOG2055|consensus | 514 | 99.96 | ||
| KOG1538|consensus | 1081 | 99.95 | ||
| KOG0269|consensus | 839 | 99.95 | ||
| KOG1274|consensus | 933 | 99.95 | ||
| KOG0650|consensus | 733 | 99.95 | ||
| KOG0650|consensus | 733 | 99.95 | ||
| KOG0321|consensus | 720 | 99.95 | ||
| KOG4328|consensus | 498 | 99.95 | ||
| KOG1538|consensus | 1081 | 99.94 | ||
| KOG2445|consensus | 361 | 99.94 | ||
| KOG0321|consensus | 720 | 99.94 | ||
| KOG0269|consensus | 839 | 99.94 | ||
| KOG1274|consensus | 933 | 99.94 | ||
| KOG4378|consensus | 673 | 99.94 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.94 | |
| KOG4378|consensus | 673 | 99.94 | ||
| KOG0267|consensus | 825 | 99.94 | ||
| KOG1273|consensus | 405 | 99.93 | ||
| KOG1034|consensus | 385 | 99.93 | ||
| KOG2445|consensus | 361 | 99.93 | ||
| KOG0267|consensus | 825 | 99.93 | ||
| KOG1009|consensus | 434 | 99.93 | ||
| KOG4497|consensus | 447 | 99.93 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.93 | |
| KOG1963|consensus | 792 | 99.92 | ||
| KOG4328|consensus | 498 | 99.92 | ||
| KOG1034|consensus | 385 | 99.92 | ||
| KOG0302|consensus | 440 | 99.92 | ||
| KOG0322|consensus | 323 | 99.92 | ||
| KOG0270|consensus | 463 | 99.92 | ||
| KOG1188|consensus | 376 | 99.91 | ||
| KOG2919|consensus | 406 | 99.91 | ||
| KOG1524|consensus | 737 | 99.91 | ||
| KOG0270|consensus | 463 | 99.9 | ||
| KOG1188|consensus | 376 | 99.9 | ||
| KOG1009|consensus | 434 | 99.9 | ||
| KOG0307|consensus | 1049 | 99.9 | ||
| KOG4497|consensus | 447 | 99.89 | ||
| KOG0302|consensus | 440 | 99.89 | ||
| KOG2919|consensus | 406 | 99.89 | ||
| KOG1007|consensus | 370 | 99.89 | ||
| KOG1310|consensus | 758 | 99.88 | ||
| KOG1007|consensus | 370 | 99.88 | ||
| KOG4227|consensus | 609 | 99.87 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.87 | |
| KOG0642|consensus | 577 | 99.86 | ||
| KOG1524|consensus | 737 | 99.86 | ||
| KOG0644|consensus | 1113 | 99.86 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 99.85 | |
| KOG0307|consensus | 1049 | 99.85 | ||
| KOG1587|consensus | 555 | 99.85 | ||
| KOG1912|consensus | 1062 | 99.85 | ||
| KOG1517|consensus | 1387 | 99.84 | ||
| KOG0322|consensus | 323 | 99.84 | ||
| KOG0642|consensus | 577 | 99.84 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.84 | |
| KOG1240|consensus | 1431 | 99.84 | ||
| KOG1587|consensus | 555 | 99.83 | ||
| KOG1334|consensus | 559 | 99.83 | ||
| KOG4227|consensus | 609 | 99.83 | ||
| KOG2110|consensus | 391 | 99.83 | ||
| KOG1517|consensus | 1387 | 99.83 | ||
| KOG0649|consensus | 325 | 99.83 | ||
| KOG2110|consensus | 391 | 99.83 | ||
| KOG0303|consensus | 472 | 99.82 | ||
| KOG0303|consensus | 472 | 99.82 | ||
| KOG0644|consensus | 1113 | 99.82 | ||
| KOG0290|consensus | 364 | 99.82 | ||
| KOG0290|consensus | 364 | 99.81 | ||
| KOG0649|consensus | 325 | 99.81 | ||
| KOG1240|consensus | 1431 | 99.81 | ||
| KOG1523|consensus | 361 | 99.81 | ||
| KOG0974|consensus | 967 | 99.8 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 99.8 | |
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.8 | |
| KOG0771|consensus | 398 | 99.8 | ||
| KOG1310|consensus | 758 | 99.79 | ||
| KOG1523|consensus | 361 | 99.79 | ||
| KOG1334|consensus | 559 | 99.79 | ||
| KOG0771|consensus | 398 | 99.78 | ||
| KOG1272|consensus | 545 | 99.78 | ||
| KOG2394|consensus | 636 | 99.78 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 99.78 | |
| KOG2111|consensus | 346 | 99.76 | ||
| KOG2315|consensus | 566 | 99.75 | ||
| KOG2321|consensus | 703 | 99.75 | ||
| KOG2315|consensus | 566 | 99.74 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.74 | |
| KOG2111|consensus | 346 | 99.74 | ||
| KOG0974|consensus | 967 | 99.74 | ||
| KOG2139|consensus | 445 | 99.73 | ||
| KOG1272|consensus | 545 | 99.72 | ||
| KOG2394|consensus | 636 | 99.72 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 99.71 | |
| KOG2139|consensus | 445 | 99.71 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.71 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 99.7 | |
| KOG2321|consensus | 703 | 99.7 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.7 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.7 | |
| KOG3881|consensus | 412 | 99.69 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.69 | |
| KOG1409|consensus | 404 | 99.69 | ||
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 99.69 | |
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 99.69 | |
| KOG1354|consensus | 433 | 99.68 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.68 | |
| KOG3881|consensus | 412 | 99.68 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.68 | |
| KOG2314|consensus | 698 | 99.66 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 99.66 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.65 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.65 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 99.65 | |
| KOG1912|consensus | 1062 | 99.63 | ||
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 99.63 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 99.62 | |
| KOG1409|consensus | 404 | 99.6 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 99.6 | |
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.59 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.57 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.56 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.56 | |
| KOG2041|consensus | 1189 | 99.55 | ||
| KOG1354|consensus | 433 | 99.55 | ||
| KOG4547|consensus | 541 | 99.55 | ||
| KOG2314|consensus | 698 | 99.54 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 99.54 | |
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 99.53 | |
| KOG4547|consensus | 541 | 99.53 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 99.52 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.52 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.52 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 99.5 | |
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 99.5 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 99.49 | |
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 99.48 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 99.48 | |
| KOG0280|consensus | 339 | 99.45 | ||
| KOG2041|consensus | 1189 | 99.44 | ||
| KOG1064|consensus | 2439 | 99.4 | ||
| KOG0280|consensus | 339 | 99.37 | ||
| KOG0309|consensus | 1081 | 99.36 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.34 | |
| KOG3914|consensus | 390 | 99.32 | ||
| KOG1064|consensus | 2439 | 99.32 | ||
| KOG3914|consensus | 390 | 99.32 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.3 | |
| KOG4190|consensus | 1034 | 99.3 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 99.29 | |
| KOG4190|consensus | 1034 | 99.28 | ||
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 99.27 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 99.26 | |
| KOG0882|consensus | 558 | 99.19 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 99.19 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 99.16 | |
| KOG0882|consensus | 558 | 99.15 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.15 | |
| KOG0309|consensus | 1081 | 99.14 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 99.13 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 99.13 | |
| KOG4532|consensus | 344 | 99.13 | ||
| KOG4649|consensus | 354 | 99.12 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 99.12 | |
| KOG4649|consensus | 354 | 99.08 | ||
| KOG4532|consensus | 344 | 99.07 | ||
| KOG4714|consensus | 319 | 99.0 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.99 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 98.99 | |
| KOG4714|consensus | 319 | 98.98 | ||
| KOG3617|consensus | 1416 | 98.96 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.96 | |
| KOG2695|consensus | 425 | 98.96 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.94 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 98.92 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 98.92 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 98.92 | |
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.91 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.9 | |
| KOG2066|consensus | 846 | 98.83 | ||
| KOG1897|consensus | 1096 | 98.81 | ||
| KOG2114|consensus | 933 | 98.81 | ||
| KOG1832|consensus | 1516 | 98.79 | ||
| KOG1275|consensus | 1118 | 98.79 | ||
| KOG1645|consensus | 463 | 98.79 | ||
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 98.78 | |
| KOG1832|consensus | 1516 | 98.76 | ||
| KOG2695|consensus | 425 | 98.73 | ||
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 98.72 | |
| KOG1920|consensus | 1265 | 98.7 | ||
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 98.69 | |
| KOG1275|consensus | 1118 | 98.69 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.69 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 98.68 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 98.67 | |
| KOG1645|consensus | 463 | 98.65 | ||
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 98.64 | |
| KOG3621|consensus | 726 | 98.63 | ||
| KOG1920|consensus | 1265 | 98.63 | ||
| KOG2066|consensus | 846 | 98.62 | ||
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 98.62 | |
| PF00930 | 353 | DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin | 98.61 | |
| KOG3621|consensus | 726 | 98.61 | ||
| KOG2114|consensus | 933 | 98.6 | ||
| KOG3617|consensus | 1416 | 98.57 | ||
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 98.54 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.52 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 98.51 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 98.5 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 98.45 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 98.39 | |
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 98.38 | |
| PF04841 | 410 | Vps16_N: Vps16, N-terminal region; InterPro: IPR00 | 98.37 | |
| PF06977 | 248 | SdiA-regulated: SdiA-regulated; InterPro: IPR00972 | 98.37 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 98.37 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 98.36 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 98.34 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 98.28 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 98.28 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 98.21 | |
| KOG1008|consensus | 783 | 98.19 | ||
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 98.18 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 98.16 | |
| KOG1897|consensus | 1096 | 98.06 | ||
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 98.06 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 98.05 | |
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 98.04 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 98.04 | |
| KOG1008|consensus | 783 | 98.02 | ||
| KOG4640|consensus | 665 | 97.95 | ||
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.93 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 97.93 | |
| COG3386 | 307 | Gluconolactonase [Carbohydrate transport and metab | 97.85 | |
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 97.84 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.83 | |
| KOG4640|consensus | 665 | 97.79 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 97.78 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.77 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 97.73 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.7 | |
| PRK13616 | 591 | lipoprotein LpqB; Provisional | 97.67 | |
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 97.64 | |
| KOG2444|consensus | 238 | 97.62 | ||
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 97.62 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 97.55 | |
| COG3490 | 366 | Uncharacterized protein conserved in bacteria [Fun | 97.54 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 97.54 | |
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 97.54 | |
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 97.52 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.42 | |
| KOG2079|consensus | 1206 | 97.42 | ||
| KOG4499|consensus | 310 | 97.38 | ||
| PHA02713 | 557 | hypothetical protein; Provisional | 97.37 | |
| KOG4499|consensus | 310 | 97.37 | ||
| KOG2395|consensus | 644 | 97.31 | ||
| KOG2444|consensus | 238 | 97.26 | ||
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 97.26 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 97.24 | |
| KOG2395|consensus | 644 | 97.22 | ||
| COG3204 | 316 | Uncharacterized protein conserved in bacteria [Fun | 97.2 | |
| PF05096 | 264 | Glu_cyclase_2: Glutamine cyclotransferase; InterPr | 97.19 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 97.17 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 97.06 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 97.01 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 97.0 | |
| KOG4441|consensus | 571 | 97.0 | ||
| TIGR03074 | 764 | PQQ_membr_DH membrane-bound PQQ-dependent dehydrog | 96.99 | |
| PF14870 | 302 | PSII_BNR: Photosynthesis system II assembly factor | 96.94 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 96.91 | |
| KOG4441|consensus | 571 | 96.88 | ||
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 96.84 | |
| KOG2079|consensus | 1206 | 96.66 | ||
| PRK10115 | 686 | protease 2; Provisional | 96.62 | |
| COG3823 | 262 | Glutamine cyclotransferase [Posttranslational modi | 96.55 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 96.33 | |
| COG4257 | 353 | Vgb Streptogramin lyase [Defense mechanisms] | 96.21 | |
| KOG2280|consensus | 829 | 96.2 | ||
| PHA03098 | 534 | kelch-like protein; Provisional | 96.08 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 96.07 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 96.05 | |
| KOG3630|consensus | 1405 | 95.87 | ||
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 95.83 | |
| PRK10115 | 686 | protease 2; Provisional | 95.82 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 95.81 | |
| PF08728 | 717 | CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans | 95.8 | |
| KOG3616|consensus | 1636 | 95.71 | ||
| KOG3630|consensus | 1405 | 95.7 | ||
| PHA03098 | 534 | kelch-like protein; Provisional | 95.69 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 95.64 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 95.63 | |
| COG3292 | 671 | Predicted periplasmic ligand-binding sensor domain | 95.56 | |
| PF11725 | 1774 | AvrE: Pathogenicity factor; InterPro: IPR021085 Th | 95.55 | |
| KOG2377|consensus | 657 | 95.54 | ||
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 95.25 | |
| PF14727 | 418 | PHTB1_N: PTHB1 N-terminus | 95.23 | |
| KOG1898|consensus | 1205 | 95.21 | ||
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 95.2 | |
| PRK13684 | 334 | Ycf48-like protein; Provisional | 95.19 | |
| KOG2280|consensus | 829 | 95.13 | ||
| COG5276 | 370 | Uncharacterized conserved protein [Function unknow | 95.08 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 95.07 | |
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 95.04 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 95.03 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 95.01 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 95.0 | |
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 94.82 | |
| KOG2377|consensus | 657 | 94.81 | ||
| COG3823 | 262 | Glutamine cyclotransferase [Posttranslational modi | 94.79 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 94.73 | |
| KOG1916|consensus | 1283 | 94.61 | ||
| KOG2247|consensus | 615 | 94.58 | ||
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 94.51 | |
| KOG1916|consensus | 1283 | 94.43 | ||
| TIGR02604 | 367 | Piru_Ver_Nterm putative membrane-bound dehydrogena | 94.43 | |
| PF02333 | 381 | Phytase: Phytase; InterPro: IPR003431 Phytase (3.1 | 94.41 | |
| COG5167 | 776 | VID27 Protein involved in vacuole import and degra | 94.38 | |
| PF14779 | 257 | BBS1: Ciliary BBSome complex subunit 1 | 94.37 | |
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 94.22 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 94.09 | |
| KOG1900|consensus | 1311 | 94.0 | ||
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 93.91 | |
| COG4590 | 733 | ABC-type uncharacterized transport system, permeas | 93.87 | |
| PF08801 | 422 | Nucleoporin_N: Nup133 N terminal like; InterPro: I | 93.56 | |
| PF15390 | 671 | DUF4613: Domain of unknown function (DUF4613) | 93.49 | |
| PF02333 | 381 | Phytase: Phytase; InterPro: IPR003431 Phytase (3.1 | 93.48 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 93.46 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 93.42 | |
| PF13449 | 326 | Phytase-like: Esterase-like activity of phytase | 93.42 | |
| PF05935 | 477 | Arylsulfotrans: Arylsulfotransferase (ASST); Inter | 93.4 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 93.39 | |
| KOG1898|consensus | 1205 | 93.15 | ||
| PF07250 | 243 | Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterP | 93.06 | |
| PF14761 | 215 | HPS3_N: Hermansky-Pudlak syndrome 3 | 93.06 | |
| PF11725 | 1774 | AvrE: Pathogenicity factor; InterPro: IPR021085 Th | 92.36 | |
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 92.33 | |
| PLN00033 | 398 | photosystem II stability/assembly factor; Provisio | 92.18 | |
| KOG2247|consensus | 615 | 91.99 | ||
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 91.96 | |
| TIGR03118 | 336 | PEPCTERM_chp_1 conserved hypothetical protein TIGR | 91.82 | |
| COG1520 | 370 | FOG: WD40-like repeat [Function unknown] | 91.29 | |
| KOG1900|consensus | 1311 | 91.21 | ||
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 91.12 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 91.0 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 90.86 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 90.48 | |
| PF11635 | 753 | Med16: Mediator complex subunit 16; InterPro: IPR0 | 89.92 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 89.39 | |
| KOG4460|consensus | 741 | 89.36 | ||
| COG1520 | 370 | FOG: WD40-like repeat [Function unknown] | 89.1 | |
| PF10433 | 504 | MMS1_N: Mono-functional DNA-alkylating methyl meth | 89.07 | |
| PF10433 | 504 | MMS1_N: Mono-functional DNA-alkylating methyl meth | 89.02 | |
| KOG3616|consensus | 1636 | 88.92 | ||
| KOG4460|consensus | 741 | 88.9 | ||
| COG5290 | 1243 | IkappaB kinase complex, IKAP component [Transcript | 88.81 | |
| KOG1983|consensus | 993 | 88.78 | ||
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 88.37 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 88.31 | |
| TIGR03606 | 454 | non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH | 87.9 | |
| PF07995 | 331 | GSDH: Glucose / Sorbosone dehydrogenase; InterPro: | 87.54 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 87.35 | |
| smart00036 | 302 | CNH Domain found in NIK1-like kinases, mouse citro | 86.99 | |
| PF03022 | 287 | MRJP: Major royal jelly protein; InterPro: IPR0035 | 86.98 | |
| PF11635 | 753 | Med16: Mediator complex subunit 16; InterPro: IPR0 | 86.87 | |
| PF05935 | 477 | Arylsulfotrans: Arylsulfotransferase (ASST); Inter | 86.59 | |
| PF12768 | 281 | Rax2: Cortical protein marker for cell polarity | 86.47 |
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-65 Score=469.74 Aligned_cols=549 Identities=42% Similarity=0.750 Sum_probs=477.8
Q ss_pred cccccceeeeeeeeeeecCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeCeEEEEEcCC
Q psy14906 13 SNSSKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANN 92 (583)
Q Consensus 13 ~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 92 (583)
-+.|+||.|||++|++++.+|. .+..-+..+++++|.|+++.+||.+...++.+.+.++..|+|++-+..++.++..+
T Consensus 18 ~~~S~iFapfR~lG~vsn~VP~--~~~~~~~~~~vtt~vgksfqvYd~~kl~ll~vs~~lp~~I~alas~~~~vy~A~g~ 95 (910)
T KOG1539|consen 18 RNESDIFAPFRALGYVSNGVPF--RVVALGSTFYVTTCVGKSFQVYDVNKLNLLFVSKPLPDKITALASDKDYVYVASGN 95 (910)
T ss_pred ccccccccchhhhceecCCCce--eeeecCceEEEEEecCceEEEEeccceEEEEecCCCCCceEEEEecCceEEEecCc
Confidence 4589999999999999999994 55557889999999999999999999999999999999999999776666666666
Q ss_pred eEEEEeccceeeeeecccCcc---------------------------------------------EEEE-ccCC--CEE
Q psy14906 93 IIYAWRRGIDIVGTYKGHTSP---------------------------------------------VHLI-LPFG--PHL 124 (583)
Q Consensus 93 ~i~vw~~~~~~~~~~~~h~~~---------------------------------------------v~~i-s~~~--~~l 124 (583)
.|.+|.........+.+|... |+++ +|.- +.+
T Consensus 96 ~i~~~~rgk~i~~~~~~~~a~v~~l~~fGe~lia~d~~~~l~vw~~s~~~~e~~l~~~~~~~~~~~Ital~HP~TYLNKI 175 (910)
T KOG1539|consen 96 KIYAYARGKHIRHTTLLHGAKVHLLLPFGEHLIAVDISNILFVWKTSSIQEELYLQSTFLKVEGDFITALLHPSTYLNKI 175 (910)
T ss_pred EEEEEEccceEEEEeccccceEEEEeeecceEEEEEccCcEEEEEeccccccccccceeeeccCCceeeEecchhheeeE
Confidence 665555443333333333333 4444 3332 455
Q ss_pred EEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccC
Q psy14906 125 ISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTW 204 (583)
Q Consensus 125 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~ 204 (583)
+.|+.+|.+++|++.+++.+++++ ++...|+++.-+|--+.+|+|..+|+|.++|++.++.+.+|+...
T Consensus 176 vvGs~~G~lql~Nvrt~K~v~~f~-----------~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~ 244 (910)
T KOG1539|consen 176 VVGSSQGRLQLWNVRTGKVVYTFQ-----------EFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDW 244 (910)
T ss_pred EEeecCCcEEEEEeccCcEEEEec-----------ccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccc
Confidence 566666666666666666666666 888999999999999999999999999999999999999999878
Q ss_pred CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCc
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNG 284 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~ 284 (583)
+.|++++|..||++++++|+..|.+.+||++..++...+...|.+.|....|.|....+++++.|+.+++|-.|..++..
T Consensus 245 g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~p 324 (910)
T KOG1539|consen 245 GRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVP 324 (910)
T ss_pred cceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcc
Confidence 99999999999999999999999999999999998888877899999999999999999999999999999999888888
Q ss_pred eeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCcccee
Q psy14906 285 RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQF 364 (583)
Q Consensus 285 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (583)
+.++...||..|..++.|....+..+.+++.|++++.+++......+.++........ .+.+ ....+....|++..+
T Consensus 325 R~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~-kk~~--~~~~~~~k~p~i~~f 401 (910)
T KOG1539|consen 325 RLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRA-KKVN--VFSTEKLKLPPIVEF 401 (910)
T ss_pred hheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhccccccccc-cccc--ccchhhhcCCcceee
Confidence 9999999999999999999768999999999999999999887776666552211111 1111 122567789999999
Q ss_pred eeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccC
Q psy14906 365 SFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSG 444 (583)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 444 (583)
++..+++..|+++++++.++...+.|+......+...+.+.++.. ....+++++.+++|++.+.|+..|.|.+|++++|
T Consensus 402 a~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~-~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSG 480 (910)
T KOG1539|consen 402 AFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKK-DDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSG 480 (910)
T ss_pred ecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccc-cCcceEEEEEeccCceEEEeccCCeEEEEEcccC
Confidence 999999999999999999999999999999999999888887666 3478999999999999999999999999999999
Q ss_pred ccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCc
Q psy14906 445 AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDF 524 (583)
Q Consensus 445 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 524 (583)
-....+... ..|.++|++++...-++.+++++.+|.+++||.... .++..++...++.++..+....++|++.+|-
T Consensus 481 i~r~sf~~~--~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k--~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf 556 (910)
T KOG1539|consen 481 IHRKSFGDS--PAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKK--VLKKSLRLGSSITGIVYHRVSDLLAIALDDF 556 (910)
T ss_pred eeecccccC--ccccCceeEEEecCCCceEEEccCcceEEEEecCCc--ceeeeeccCCCcceeeeeehhhhhhhhcCce
Confidence 998888433 689999999999999999999999999999999998 7888999999999999999999999999999
Q ss_pred eEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 525 TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 525 ~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
.|+++|..+.+.++.+.||.+.|++++|||||++|++++.|++|++||+.++.++..|
T Consensus 557 ~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~ 614 (910)
T KOG1539|consen 557 SIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGL 614 (910)
T ss_pred eEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeE
Confidence 9999999999999999999999999999999999999999999999999999998765
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-59 Score=394.25 Aligned_cols=365 Identities=21% Similarity=0.291 Sum_probs=311.3
Q ss_pred ceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEE
Q psy14906 101 IDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIG 178 (583)
Q Consensus 101 ~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 178 (583)
.++-..+.||.++|.++ +|+|.+||+|+.|.++++||+.+..++.+.+ +|...|.|++|+|||+.||
T Consensus 105 trCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~K-----------gH~~WVlcvawsPDgk~iA 173 (480)
T KOG0271|consen 105 TRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCK-----------GHKNWVLCVAWSPDGKKIA 173 (480)
T ss_pred ceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeec-----------CCccEEEEEEECCCcchhh
Confidence 35667788999999997 9999999999999999999999999999998 9999999999999999999
Q ss_pred EEecCCeEEEEEccCCcee-EEEeccCCCeEEEEEec-----CCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceE
Q psy14906 179 VGLSNKKIILHNILTDESL-MEFIQTWGPVTALSFRT-----DGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVT 252 (583)
Q Consensus 179 ~~~~d~~i~iw~~~~~~~~-~~~~~~~~~v~~~~~~~-----~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~ 252 (583)
+|+.||+|++||.++|+++ ..+.+|...|++++|.| ..+ +|++++.||.++|||+..++++..+ .+|+.+|+
T Consensus 174 SG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r-~las~skDg~vrIWd~~~~~~~~~l-sgHT~~VT 251 (480)
T KOG0271|consen 174 SGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCR-RLASSSKDGSVRIWDTKLGTCVRTL-SGHTASVT 251 (480)
T ss_pred ccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCcc-ceecccCCCCEEEEEccCceEEEEe-ccCccceE
Confidence 9999999999999998766 56889999999999976 445 8999999999999999999999999 89999999
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccccccee
Q psy14906 253 GAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKN 332 (583)
Q Consensus 253 ~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 332 (583)
|+.|--+| +|++++.|++|++|+.. .+.+.+.+++|...|+.++.+ ....|-+|..|.+= ...+.
T Consensus 252 CvrwGG~g-liySgS~DrtIkvw~a~----dG~~~r~lkGHahwvN~lals--Tdy~LRtgaf~~t~--------~~~~~ 316 (480)
T KOG0271|consen 252 CVRWGGEG-LIYSGSQDRTIKVWRAL----DGKLCRELKGHAHWVNHLALS--TDYVLRTGAFDHTG--------RKPKS 316 (480)
T ss_pred EEEEcCCc-eEEecCCCceEEEEEcc----chhHHHhhcccchheeeeecc--chhhhhcccccccc--------ccCCC
Confidence 99997554 89999999999999654 578899999999999999997 34445555544221 11110
Q ss_pred eccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCC
Q psy14906 333 LGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQ 412 (583)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (583)
.. ...+... ++
T Consensus 317 ~s--e~~~~Al-------------------------------------------------------------~r------ 327 (480)
T KOG0271|consen 317 FS--EEQKKAL-------------------------------------------------------------ER------ 327 (480)
T ss_pred hH--HHHHHHH-------------------------------------------------------------HH------
Confidence 00 0000000 00
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccC-ccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSG-AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
.....-..+..+++|+.|.++.+|+.... +++... .+|..-|+.+.||||++++|+++-|..|++|+-.++
T Consensus 328 ---Y~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rm-----tgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tG 399 (480)
T KOG0271|consen 328 ---YEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRM-----TGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTG 399 (480)
T ss_pred ---HHHhhccCcceeEEecCCceEEEecccccccchhhh-----hchhhheeeEEECCCccEEEEeecccceeeeeCCCc
Confidence 00111223578999999999999997644 355555 799999999999999999999999999999999999
Q ss_pred CCCceEEee-ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEE
Q psy14906 492 GKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRV 570 (583)
Q Consensus 492 ~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~v 570 (583)
+.+..++ |-..|..++|+.|.++|++|+.|.++++||+++.++...+.||.+.|.++.|+|||+.+++|+.|..+++
T Consensus 400 --k~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~l 477 (480)
T KOG0271|consen 400 --KFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRL 477 (480)
T ss_pred --chhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEe
Confidence 9999998 4589999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Ee
Q psy14906 571 WD 572 (583)
Q Consensus 571 w~ 572 (583)
|.
T Consensus 478 w~ 479 (480)
T KOG0271|consen 478 WR 479 (480)
T ss_pred ec
Confidence 95
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-56 Score=403.55 Aligned_cols=497 Identities=17% Similarity=0.217 Sum_probs=405.0
Q ss_pred cccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCC-CCCCeEEEEeeC---eEEEEEcCCeEEEEec-cceeeee
Q psy14906 32 LPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQ-HEDDITCLSSDF---FHIYTSANNIIYAWRR-GIDIVGT 106 (583)
Q Consensus 32 ~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~-h~~~v~~~~~~~---~~~~~~~~~~i~vw~~-~~~~~~~ 106 (583)
.-.++...||+ ..+++...+..+++|++.++++++.... |..||.-++|++ -+.+++.|+.++|||+ ++.+...
T Consensus 64 ~ita~~l~~d~-~~L~~a~rs~llrv~~L~tgk~irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~ 142 (775)
T KOG0319|consen 64 EITALALTPDE-EVLVTASRSQLLRVWSLPTGKLIRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHS 142 (775)
T ss_pred hhheeeecCCc-cEEEEeeccceEEEEEcccchHhHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEE
Confidence 33566677773 4455566899999999999999999988 999999999976 3666789999999997 5688999
Q ss_pred ecccCccEEEE--ccCC--CEEEEEeCCCcEEEEEcCCCcE-EEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe
Q psy14906 107 YKGHTSPVHLI--LPFG--PHLISVDEESNVKVWDIKAEET-YLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL 181 (583)
Q Consensus 107 ~~~h~~~v~~i--s~~~--~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 181 (583)
|+||.+.|.++ .|+- ..|++|..|+++++||+.+... +.... .|.+.|++++|++|+..+++++
T Consensus 143 fkG~gGvVssl~F~~~~~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~-----------~H~S~vtsL~~~~d~~~~ls~~ 211 (775)
T KOG0319|consen 143 FKGHGGVVSSLLFHPHWNRWLLASGATDGTVRVWNLNDKRTCLHTMI-----------LHKSAVTSLAFSEDSLELLSVG 211 (775)
T ss_pred ecCCCceEEEEEeCCccchhheeecCCCceEEEEEcccCchHHHHHH-----------hhhhheeeeeeccCCceEEEec
Confidence 99999999997 4544 5689999999999999996554 66665 8999999999999999999999
Q ss_pred cCCeEEEEEccCCceeEEEeccCCCeEEEEEecC-----CCCEEEEEcCCCcEEEEeCCCCeehhhhh------------
Q psy14906 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTD-----GPPMMVSGSNTGHLTVWNLEDRQVENQIK------------ 244 (583)
Q Consensus 182 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~~l~s~~~dg~i~vwd~~~~~~~~~~~------------ 244 (583)
.|..+.+||+.+.+....+... ..+.++.+-++ +. ++++++.+|.+++||.++++++....
T Consensus 212 RDkvi~vwd~~~~~~l~~lp~y-e~~E~vv~l~~~~~~~~~-~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~ 289 (775)
T KOG0319|consen 212 RDKVIIVWDLVQYKKLKTLPLY-ESLESVVRLREELGGKGE-YIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLA 289 (775)
T ss_pred cCcEEEEeehhhhhhhheechh-hheeeEEEechhcCCcce-EEEEecCCceEEEEecccchhhhhhccCCchhhhccee
Confidence 9999999999888877777766 67778888777 55 78888889999999987765433221
Q ss_pred ------------------------------hccccceEEEEEe-cCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC
Q psy14906 245 ------------------------------KAHRKVVTGAHFL-YNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH 293 (583)
Q Consensus 245 ------------------------------~~~~~~v~~~~~~-~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~ 293 (583)
.|..+.|.+++|- |+.++|+.++..+.+|++++. ...-..+.+|
T Consensus 290 ~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~-----~~~c~ii~GH 364 (775)
T KOG0319|consen 290 IESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLP-----TSYCQIIPGH 364 (775)
T ss_pred ccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecC-----CCceEEEeCc
Confidence 2334567777764 567889999999999999543 2222378899
Q ss_pred CCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccc
Q psy14906 294 SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKD 373 (583)
Q Consensus 294 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (583)
...|.++.... +|.+|++++.|.++++|.++++...... .. ...-+...+.+.+. ...
T Consensus 365 ~e~vlSL~~~~-~g~llat~sKD~svilWr~~~~~~~~~~-~a----------------~~~gH~~svgava~----~~~ 422 (775)
T KOG0319|consen 365 TEAVLSLDVWS-SGDLLATGSKDKSVILWRLNNNCSKSLC-VA----------------QANGHTNSVGAVAG----SKL 422 (775)
T ss_pred hhheeeeeecc-cCcEEEEecCCceEEEEEecCCcchhhh-hh----------------hhcccccccceeee----ccc
Confidence 99999999442 6789999999999999998443322111 00 00112222233333 344
Q ss_pred cccEEEEecCCceEEEeecCcccccce--eeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccC
Q psy14906 374 WNNIAAIHTGKNKVSLWSFYKSKMDDM--FLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYG 451 (583)
Q Consensus 374 ~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 451 (583)
...++++.+.|..+++|++........ .+........|...|.+++++|+.+++++|+.|.+.++|+++.......+
T Consensus 423 ~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vL- 501 (775)
T KOG0319|consen 423 GASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVL- 501 (775)
T ss_pred CccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEe-
Confidence 568899999999999999988333222 22223345567789999999999999999999999999999999999998
Q ss_pred CCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee-ccCCeeeEEeccCCcEEEEEeCCceEEEEE
Q psy14906 452 HDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIID 530 (583)
Q Consensus 452 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d 530 (583)
.+|...|.++.|+|..+.++|++.|++|+||.+++. .++++++ |...|..+.|-.+|+.|++++.||-+++|+
T Consensus 502 ----sGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~f--SClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWn 575 (775)
T KOG0319|consen 502 ----SGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTF--SCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWN 575 (775)
T ss_pred ----eCCccceEEEEeccccceeEeccCCceEEEEEeccc--eeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEe
Confidence 899999999999999999999999999999999999 9999998 557899999999999999999999999999
Q ss_pred ccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCc
Q psy14906 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576 (583)
Q Consensus 531 ~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~ 576 (583)
+++++++.++.+|.+.|++++-+|...+++||+.||.|.+|.=.|.
T Consensus 576 ikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~Te 621 (775)
T KOG0319|consen 576 IKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVTE 621 (775)
T ss_pred ccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEeecCcH
Confidence 9999999999999999999999999999999999999999974443
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-54 Score=377.55 Aligned_cols=516 Identities=14% Similarity=0.186 Sum_probs=383.2
Q ss_pred ecCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eCeEEEEE-cCCeEEEEeccc---e
Q psy14906 29 SNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DFFHIYTS-ANNIIYAWRRGI---D 102 (583)
Q Consensus 29 ~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~-~~~~i~vw~~~~---~ 102 (583)
....|..+-..|.++. |.|+.++.|++-+++++.....+..|..+++-..+ .|.+++.+ ..|+|||||..+ .
T Consensus 17 ~Rg~~~~ig~dpkgd~--ilY~nGksv~ir~i~~~~~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hi 94 (603)
T KOG0318|consen 17 ERGVPIIIGGDPKGDN--ILYTNGKSVIIRNIDNPASVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHI 94 (603)
T ss_pred cCCcceEeccCCCCCe--EEEeCCCEEEEEECCCccceeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCccee
Confidence 3455566666666666 89999999999999999999999999888887666 55655554 678999999643 3
Q ss_pred eeeeecccCccEEEE--ccCCCEEEEEeCC--CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCC-EE
Q psy14906 103 IVGTYKGHTSPVHLI--LPFGPHLISVDEE--SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD-II 177 (583)
Q Consensus 103 ~~~~~~~h~~~v~~i--s~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l 177 (583)
+..+++.-.++|..| +.|+++|++.++. +..+++-+++|.-+.++. +|...|++++|-|... ++
T Consensus 95 LKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~DSG~SvGei~-----------GhSr~ins~~~KpsRPfRi 163 (603)
T KOG0318|consen 95 LKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWDSGNSVGEIT-----------GHSRRINSVDFKPSRPFRI 163 (603)
T ss_pred eeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEecCCCccceee-----------ccceeEeeeeccCCCceEE
Confidence 555677889999998 7788899887653 333444444666677777 9999999999998765 79
Q ss_pred EEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhh--hccccceEEEE
Q psy14906 178 GVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK--KAHRKVVTGAH 255 (583)
Q Consensus 178 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~~v~~~~ 255 (583)
++|++|++|.+|+-...+...+++.|..-|+++.|+|||. ++++.+.||++.+||-.+++.+..+. .+|.+.|.+++
T Consensus 164 ~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~-~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfals 242 (603)
T KOG0318|consen 164 ATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGS-RFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALS 242 (603)
T ss_pred EeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCC-eEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEE
Confidence 9999999999999777777788889999999999999999 99999999999999999999988882 28999999999
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCCC---------------------------------------CCceeeEEeccCCCC
Q psy14906 256 FLYNEPLLVTSSPDNTLKLWIFDKAD---------------------------------------GNGRLLRIREGHSAP 296 (583)
Q Consensus 256 ~~~~~~~l~s~~~d~~i~~w~~~~~~---------------------------------------~~~~~~~~~~~~~~~ 296 (583)
|+||++.+++++.|.+++|||+.... .....+..+.+|...
T Consensus 243 WsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ 322 (603)
T KOG0318|consen 243 WSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKS 322 (603)
T ss_pred ECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccc
Confidence 99999999999999999999874321 012244556889999
Q ss_pred CeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhh---cchh--ccccccCCCccceeeeecc--
Q psy14906 297 PNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRK---NRLE--KMNEKFILPPVSQFSFGLA-- 369 (583)
Q Consensus 297 v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~-- 369 (583)
|+++..+| ++++|++|+.||.|.-|+..++...+..+....+....... +... .+.+.+..-+...-.+...
T Consensus 323 ITaLtv~~-d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~ 401 (603)
T KOG0318|consen 323 ITALTVSP-DGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEV 401 (603)
T ss_pred eeEEEEcC-CCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccce
Confidence 99999997 78999999999999999999887665432222111100000 0000 0000000000000000000
Q ss_pred cc----------cccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEE
Q psy14906 370 RE----------KDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRF 439 (583)
Q Consensus 370 ~~----------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~ 439 (583)
.. ...+.+++....+..+.+-+...... ........+++++|+++.+++|+.||.|++|
T Consensus 402 ~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~-----------~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvy 470 (603)
T KOG0318|consen 402 VKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSS-----------IPIGYESSAVAVSPDGSEVAVGGQDGKVHVY 470 (603)
T ss_pred eecCCCceeEEEcCCCCEEEEEecCcEEEEecCCccee-----------eccccccceEEEcCCCCEEEEecccceEEEE
Confidence 00 00011222222222222211111110 0012567899999999999999999999999
Q ss_pred EcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEE
Q psy14906 440 NIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAV 519 (583)
Q Consensus 440 d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 519 (583)
.+..+........ ..|.++|++++||||+.+||++...+.+.+||..+.......-.-|...|.+++|+|+..++|+
T Consensus 471 sl~g~~l~ee~~~---~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vAT 547 (603)
T KOG0318|consen 471 SLSGDELKEEAKL---LEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVAT 547 (603)
T ss_pred EecCCcccceeee---ecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEe
Confidence 9987665333211 5899999999999999999999999999999999884333334447789999999999999999
Q ss_pred EeCCceEEEEEcccc-ceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 520 CLDDFTVNIIDIDTC-TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 520 ~~~dg~i~i~d~~~~-~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
|+-|-.|.||+++.. +.+....+|...|+.+.|- |...|++.+.|..|++|++.
T Consensus 548 GSlDt~Viiysv~kP~~~i~iknAH~~gVn~v~wl-de~tvvSsG~Da~iK~W~v~ 602 (603)
T KOG0318|consen 548 GSLDTNVIIYSVKKPAKHIIIKNAHLGGVNSVAWL-DESTVVSSGQDANIKVWNVT 602 (603)
T ss_pred ccccceEEEEEccChhhheEeccccccCceeEEEe-cCceEEeccCcceeEEeccc
Confidence 999999999999764 3455566799899999996 66689999999999999974
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-55 Score=398.70 Aligned_cols=499 Identities=18% Similarity=0.288 Sum_probs=405.0
Q ss_pred EEEEeCCCceEEEEeeCCeEEEEecCCcEE-Eeec-CCCCCCeEEEEe--eC-eEEEEEcCCeEEEEec-cceeeeeecc
Q psy14906 36 ARFIRRRKETLFVTCVGKAFHVYGCNHFKL-LSVS-PQHEDDITCLSS--DF-FHIYTSANNIIYAWRR-GIDIVGTYKG 109 (583)
Q Consensus 36 ~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~-~~~~-~~h~~~v~~~~~--~~-~~~~~~~~~~i~vw~~-~~~~~~~~~~ 109 (583)
++|+++|+. +++..++.|.+-|+++++. +... ..-...+++++. |+ .+++++..+.+++|++ .++.++.++.
T Consensus 25 ~~~s~nG~~--L~t~~~d~Vi~idv~t~~~~l~s~~~ed~d~ita~~l~~d~~~L~~a~rs~llrv~~L~tgk~irswKa 102 (775)
T KOG0319|consen 25 VAWSSNGQH--LYTACGDRVIIIDVATGSIALPSGSNEDEDEITALALTPDEEVLVTASRSQLLRVWSLPTGKLIRSWKA 102 (775)
T ss_pred eeECCCCCE--EEEecCceEEEEEccCCceecccCCccchhhhheeeecCCccEEEEeeccceEEEEEcccchHhHhHhh
Confidence 789777666 7777899999999999988 4433 346677888887 44 5667778889999996 5688888888
Q ss_pred -cCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCC--EEEEEecCC
Q psy14906 110 -HTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD--IIGVGLSNK 184 (583)
Q Consensus 110 -h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~~d~ 184 (583)
|++||..+ +|.|..|++|+.|+.+++||+..+.+...++ +|.+.|.++.|+|+-. .|++|..|+
T Consensus 103 ~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~~th~fk-----------G~gGvVssl~F~~~~~~~lL~sg~~D~ 171 (775)
T KOG0319|consen 103 IHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGYCTHSFK-----------GHGGVVSSLLFHPHWNRWLLASGATDG 171 (775)
T ss_pred ccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCEEEEEec-----------CCCceEEEEEeCCccchhheeecCCCc
Confidence 99999876 8999999999999999999999999999998 9999999999999765 589999999
Q ss_pred eEEEEEccCCce-eEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecC----
Q psy14906 185 KIILHNILTDES-LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN---- 259 (583)
Q Consensus 185 ~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~---- 259 (583)
.+++||+.+... +..+..|.+.|++++|++|+. -+++++.|..+.+||+.+.+..+.+ .-...+-++.+.++
T Consensus 172 ~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~-~~ls~~RDkvi~vwd~~~~~~l~~l--p~ye~~E~vv~l~~~~~~ 248 (775)
T KOG0319|consen 172 TVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSL-ELLSVGRDKVIIVWDLVQYKKLKTL--PLYESLESVVRLREELGG 248 (775)
T ss_pred eEEEEEcccCchHHHHHHhhhhheeeeeeccCCc-eEEEeccCcEEEEeehhhhhhhhee--chhhheeeEEEechhcCC
Confidence 999999986554 788889999999999999988 8999999999999999877776666 34456777778777
Q ss_pred -CCEEEEEeCCCeEEEEEccCCC---------------------------------------CCceeeEEeccCCCCCee
Q psy14906 260 -EPLLVTSSPDNTLKLWIFDKAD---------------------------------------GNGRLLRIREGHSAPPNY 299 (583)
Q Consensus 260 -~~~l~s~~~d~~i~~w~~~~~~---------------------------------------~~~~~~~~~~~~~~~v~~ 299 (583)
+.+++++|.+|.+++|+..... .+.+..+.+-|..+.|..
T Consensus 249 ~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~D 328 (775)
T KOG0319|consen 249 KGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILD 328 (775)
T ss_pred cceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhhee
Confidence 6799999999999999653210 011122223456778999
Q ss_pred EEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEE
Q psy14906 300 IQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAA 379 (583)
Q Consensus 300 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (583)
++|..++.++|+.+++.+.+++|++.+..+.-..++.. ..++.. ....+.+++
T Consensus 329 m~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e------------------------~vlSL~---~~~~g~lla 381 (775)
T KOG0319|consen 329 MKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTE------------------------AVLSLD---VWSSGDLLA 381 (775)
T ss_pred eeecCCccceEEEEeCCCceEEEecCCCceEEEeCchh------------------------heeeee---ecccCcEEE
Confidence 99987778999999999999999988776542211111 111111 111235889
Q ss_pred EecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCC-cEEEEEecCceEEEEEcccCccccccCC----CC
Q psy14906 380 IHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCG-NFVLIGYSSGHVDRFNIQSGAHRGSYGH----DN 454 (583)
Q Consensus 380 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~ 454 (583)
+++.|..+++|.++...... ........|.+.+.+++++..+ .++++++.|+++++|++...+....... ..
T Consensus 382 t~sKD~svilWr~~~~~~~~---~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t 458 (775)
T KOG0319|consen 382 TGSKDKSVILWRLNNNCSKS---LCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYT 458 (775)
T ss_pred EecCCceEEEEEecCCcchh---hhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHH
Confidence 99999999999984433221 2223344566889999998765 7899999999999999986332211100 01
Q ss_pred CCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc-CCeeeEEeccCCcEEEEEeCCceEEEEEccc
Q psy14906 455 QPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533 (583)
Q Consensus 455 ~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 533 (583)
...|...|++++++|+.+++|||+.|++.+||+++.. .....+..+ ..+.++.|+|..+.+|+++.|++|+||.+++
T Consensus 459 ~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~--~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~ 536 (775)
T KOG0319|consen 459 ERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQL--RLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSIST 536 (775)
T ss_pred HHhhcccccceEecCCCceEEecccccceeeecccCc--eEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEecc
Confidence 2589999999999999999999999999999999977 888888766 5899999999999999999999999999999
Q ss_pred cceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 534 ~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
..+++++.||...|..+.|-.+|+.|+|++.||.|++|++.++++++++
T Consensus 537 fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tl 585 (775)
T KOG0319|consen 537 FSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTL 585 (775)
T ss_pred ceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhh
Confidence 9999999999999999999999999999999999999999999999875
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-53 Score=389.40 Aligned_cols=464 Identities=19% Similarity=0.266 Sum_probs=389.6
Q ss_pred cCcccEEEEEeCCCceEEEEeeCCeEEEEecCC--------cEEEeecCCCCCCeEEEEe--eCe-EEEEEcCCeEEEEe
Q psy14906 30 NHLPVVARFIRRRKETLFVTCVGKAFHVYGCNH--------FKLLSVSPQHEDDITCLSS--DFF-HIYTSANNIIYAWR 98 (583)
Q Consensus 30 ~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~--------~~~~~~~~~h~~~v~~~~~--~~~-~~~~~~~~~i~vw~ 98 (583)
..-..++.|+|+++. ++.+.++.+.||.... ..+.+++.+|...|+++.+ |.+ +++++.|.++++|.
T Consensus 96 k~~v~~i~fSPng~~--fav~~gn~lqiw~~P~~~~~~~~pFvl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~ 173 (893)
T KOG0291|consen 96 KRGVGAIKFSPNGKF--FAVGCGNLLQIWHAPGEIKNEFNPFVLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFG 173 (893)
T ss_pred cCccceEEECCCCcE--EEEEecceeEEEecCcchhcccCcceEeeeecCCccceeEEEeccCCceEEeccccceEEEEE
Confidence 556789999999776 7777899999998643 2445677899999999999 445 55568999999999
Q ss_pred ccc---eeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCC-----------------------CcE-EEEeec
Q psy14906 99 RGI---DIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKA-----------------------EET-YLELSF 149 (583)
Q Consensus 99 ~~~---~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~-----------------------~~~-~~~~~~ 149 (583)
.++ .....+.+|.++|.+. ..+...|.+.+.||.+.+|.... ++. ...+.+
T Consensus 174 v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~ 253 (893)
T KOG0291|consen 174 VDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFW 253 (893)
T ss_pred eccccccceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEE
Confidence 743 3456788999998863 88888899999999999998872 111 000000
Q ss_pred cCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcC-CCc
Q psy14906 150 DNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSN-TGH 228 (583)
Q Consensus 150 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~ 228 (583)
... ...--......+++.+|++..+.||+|...|...+|.+.....++.+.-...+|..++|+..|. +++.|+. -|.
T Consensus 254 ~k~-~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGD-WiA~g~~klgQ 331 (893)
T KOG0291|consen 254 YKT-KKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGD-WIAFGCSKLGQ 331 (893)
T ss_pred EEE-EeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCceEEEEeecccceeeEEEecccCC-EEEEcCCccce
Confidence 000 0000013347899999999999999999999999999999999999987778999999999999 6666654 589
Q ss_pred EEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCC
Q psy14906 229 LTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSD 308 (583)
Q Consensus 229 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 308 (583)
+.||+.++...+... ++|...+++++++|||+++++|+.||.|++||.. .+-++.++..|+..|+.+.|+. .++
T Consensus 332 LlVweWqsEsYVlKQ-QgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~----SgfC~vTFteHts~Vt~v~f~~-~g~ 405 (893)
T KOG0291|consen 332 LLVWEWQSESYVLKQ-QGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQ----SGFCFVTFTEHTSGVTAVQFTA-RGN 405 (893)
T ss_pred EEEEEeeccceeeec-cccccceeeEEECCCCcEEEeccCCCcEEEEecc----CceEEEEeccCCCceEEEEEEe-cCC
Confidence 999999999888888 8999999999999999999999999999999654 6789999999999999999996 899
Q ss_pred EEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEE
Q psy14906 309 NILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVS 388 (583)
Q Consensus 309 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 388 (583)
.+++.+-||+|+.||+...+..+++..+..
T Consensus 406 ~llssSLDGtVRAwDlkRYrNfRTft~P~p-------------------------------------------------- 435 (893)
T KOG0291|consen 406 VLLSSSLDGTVRAWDLKRYRNFRTFTSPEP-------------------------------------------------- 435 (893)
T ss_pred EEEEeecCCeEEeeeecccceeeeecCCCc--------------------------------------------------
Confidence 999999999999999998877666532211
Q ss_pred EeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCc-eEEEEEcccCccccccCCCCCCCcccCeeEEEE
Q psy14906 389 LWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG-HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVS 467 (583)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 467 (583)
.+..|++..|.|..+++|+.|. .|.+|++++|+.+..+ .+|.++|.+++|
T Consensus 436 ------------------------~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiL-----sGHEgPVs~l~f 486 (893)
T KOG0291|consen 436 ------------------------IQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDIL-----SGHEGPVSGLSF 486 (893)
T ss_pred ------------------------eeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehh-----cCCCCcceeeEE
Confidence 4577899999999999999875 6999999999999999 899999999999
Q ss_pred eCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecc-----
Q psy14906 468 DNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG----- 542 (583)
Q Consensus 468 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----- 542 (583)
+|++..|++++.|.+|++||+-... .....++....+..++|+|||+.||+++-||.|.+||.+.+..+..+.+
T Consensus 487 ~~~~~~LaS~SWDkTVRiW~if~s~-~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~ 565 (893)
T KOG0291|consen 487 SPDGSLLASGSWDKTVRIWDIFSSS-GTVETLEIRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLS 565 (893)
T ss_pred ccccCeEEeccccceEEEEEeeccC-ceeeeEeeccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchhhcc
Confidence 9999999999999999999987642 4678888899999999999999999999999999999987765533322
Q ss_pred ---------------cccceeeEEecCCCcEEEEEeCCCeEEEEeCCCcccccccC
Q psy14906 543 ---------------HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583 (583)
Q Consensus 543 ---------------h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~~ 583 (583)
....++.+++|+||.+|++|+..+.|++|++.++-+++.||
T Consensus 566 ~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~vllkkfq 621 (893)
T KOG0291|consen 566 GGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGVLLKKFQ 621 (893)
T ss_pred ccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchhheeeeEE
Confidence 23568999999999999999999999999999999998875
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-55 Score=367.42 Aligned_cols=325 Identities=19% Similarity=0.274 Sum_probs=293.0
Q ss_pred EEeecCCCCCCeEEEEeeC---eEEEEEcCCeEEEEecc-ceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEc
Q psy14906 65 LLSVSPQHEDDITCLSSDF---FHIYTSANNIIYAWRRG-IDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDI 138 (583)
Q Consensus 65 ~~~~~~~h~~~v~~~~~~~---~~~~~~~~~~i~vw~~~-~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~ 138 (583)
+-..+.||.++|.|++|.| ++++++.|.++++||+. ..+..+.++|...|.|+ +|||+.||+|+.||+|++||.
T Consensus 107 CssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdp 186 (480)
T KOG0271|consen 107 CSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDP 186 (480)
T ss_pred eccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecC
Confidence 3345789999999999966 78889999999999974 56788999999999998 999999999999999999999
Q ss_pred CCCcEEEE-eeccCCceEEecccCCcceEEEeeCC-----CCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEE
Q psy14906 139 KAEETYLE-LSFDNDTFKIMGKRWNSCVNVLEPSP-----VVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSF 212 (583)
Q Consensus 139 ~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~s~-----~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~ 212 (583)
++|+++.. +. +|...|++++|.| ..++||+++.||.++|||+..+.++..+.+|+.+|+|+.|
T Consensus 187 ktg~~~g~~l~-----------gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrw 255 (480)
T KOG0271|consen 187 KTGQQIGRALR-----------GHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRW 255 (480)
T ss_pred CCCCccccccc-----------CcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEE
Confidence 99887644 44 9999999999975 6789999999999999999999999999999999999999
Q ss_pred ecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEe-----------cCC---------------------
Q psy14906 213 RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL-----------YNE--------------------- 260 (583)
Q Consensus 213 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~-----------~~~--------------------- 260 (583)
--+| ++++|+.|++|++|+...|++...+ ++|...|+.++.+ |.+
T Consensus 256 GG~g--liySgS~DrtIkvw~a~dG~~~r~l-kGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~ 332 (480)
T KOG0271|consen 256 GGEG--LIYSGSQDRTIKVWRALDGKLCREL-KGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVL 332 (480)
T ss_pred cCCc--eEEecCCCceEEEEEccchhHHHhh-cccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhh
Confidence 8777 8999999999999999999999999 8999999999987 223
Q ss_pred ----CEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccc
Q psy14906 261 ----PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIA 336 (583)
Q Consensus 261 ----~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 336 (583)
..|++|+.|.++.+|+ ... ..+++..+.+|..-|+.+.|+| |+.++++++.|..|++||.++++.+..+.
T Consensus 333 ~~~~erlVSgsDd~tlflW~--p~~-~kkpi~rmtgHq~lVn~V~fSP-d~r~IASaSFDkSVkLW~g~tGk~lasfR-- 406 (480)
T KOG0271|consen 333 KDSGERLVSGSDDFTLFLWN--PFK-SKKPITRMTGHQALVNHVSFSP-DGRYIASASFDKSVKLWDGRTGKFLASFR-- 406 (480)
T ss_pred ccCcceeEEecCCceEEEec--ccc-cccchhhhhchhhheeeEEECC-CccEEEEeecccceeeeeCCCcchhhhhh--
Confidence 3599999999999994 322 4567778999999999999998 89999999999999999999998766552
Q ss_pred hhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCce
Q psy14906 337 SANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT 416 (583)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 416 (583)
+|-..+.
T Consensus 407 -------------------------------------------------------------------------GHv~~VY 413 (480)
T KOG0271|consen 407 -------------------------------------------------------------------------GHVAAVY 413 (480)
T ss_pred -------------------------------------------------------------------------hccceeE
Confidence 1116789
Q ss_pred EEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE
Q psy14906 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487 (583)
Q Consensus 417 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 487 (583)
.++|+.|.++|++|+.|.++++|++++.+....+ .+|...|.++.|+|||..+++|+.|..+++|.
T Consensus 414 qvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DL-----pGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 414 QVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDL-----PGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred EEEeccCccEEEEcCCCceEEEEEeeeeeecccC-----CCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 9999999999999999999999999999999888 79999999999999999999999999999995
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-51 Score=358.94 Aligned_cols=446 Identities=15% Similarity=0.199 Sum_probs=358.6
Q ss_pred CeEEEEEcCCeEEEEecc-ceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecc
Q psy14906 83 FFHIYTSANNIIYAWRRG-IDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGK 159 (583)
Q Consensus 83 ~~~~~~~~~~~i~vw~~~-~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 159 (583)
+.-+.-..++.|.+-+++ ......+.+|..+++-. ||.|-|+|+|...|+|+|||....+.+...++.
T Consensus 30 gd~ilY~nGksv~ir~i~~~~~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~--------- 100 (603)
T KOG0318|consen 30 GDNILYTNGKSVIIRNIDNPASVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQ--------- 100 (603)
T ss_pred CCeEEEeCCCEEEEEECCCccceeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeee---------
Confidence 345555567778888874 45677888998887764 999999999999999999998876666555543
Q ss_pred cCCcceEEEeeCCCCCEEEEEecC----CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSN----KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 235 (583)
...++|..++|++|+++|++.++. |.+.+|| +|..+.++.+|...|++++|-|..++.+++|+.|++|.+|+-.
T Consensus 101 v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~D--SG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGP 178 (603)
T KOG0318|consen 101 VLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWD--SGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGP 178 (603)
T ss_pred ecccccccceeCCCCcEEEEEecCccceeEEEEec--CCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCC
Confidence 668999999999999999876553 3455665 7899999999999999999999999999999999999999988
Q ss_pred CCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEec---cCCCCCeeEEEeeCCCCEEEE
Q psy14906 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE---GHSAPPNYIQFYGNSSDNILS 312 (583)
Q Consensus 236 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~ 312 (583)
..+...++ ..|..-|.++.|+|||.++++++.||.+.+| |.. .++.+..+. +|.+.|.+++|+| |+.++++
T Consensus 179 PFKFk~s~-r~HskFV~~VRysPDG~~Fat~gsDgki~iy--DGk--tge~vg~l~~~~aHkGsIfalsWsP-Ds~~~~T 252 (603)
T KOG0318|consen 179 PFKFKSSF-REHSKFVNCVRYSPDGSRFATAGSDGKIYIY--DGK--TGEKVGELEDSDAHKGSIFALSWSP-DSTQFLT 252 (603)
T ss_pred Ceeeeecc-cccccceeeEEECCCCCeEEEecCCccEEEE--cCC--CccEEEEecCCCCccccEEEEEECC-CCceEEE
Confidence 88888888 7899999999999999999999999999999 544 456666666 8999999999998 8999999
Q ss_pred eeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeec
Q psy14906 313 AAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSF 392 (583)
Q Consensus 313 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 392 (583)
++.|.++++||+.+.++.+++....... ........ ....+++-+-+|.+..++.
T Consensus 253 ~SaDkt~KIWdVs~~slv~t~~~~~~v~----------------------dqqvG~lW---qkd~lItVSl~G~in~ln~ 307 (603)
T KOG0318|consen 253 VSADKTIKIWDVSTNSLVSTWPMGSTVE----------------------DQQVGCLW---QKDHLITVSLSGTINYLNP 307 (603)
T ss_pred ecCCceEEEEEeeccceEEEeecCCchh----------------------ceEEEEEE---eCCeEEEEEcCcEEEEecc
Confidence 9999999999999999888775432210 00000000 0345566667778888887
Q ss_pred CcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccC---------------------
Q psy14906 393 YKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYG--------------------- 451 (583)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------------------- 451 (583)
.... +......|...|++++.+|++++|++|+.||.|.-|+..++..-....
T Consensus 308 ~d~~-------~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~ 380 (603)
T KOG0318|consen 308 SDPS-------VLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTI 380 (603)
T ss_pred cCCC-------hhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEE
Confidence 6654 223445666899999999999999999999999999987654321110
Q ss_pred --------------------------CC---------------------CCC--------CcccCeeEEEEeCCCcEEEE
Q psy14906 452 --------------------------HD---------------------NQP--------GHVGGVRGVVSDNLNQIVIS 476 (583)
Q Consensus 452 --------------------------~~---------------------~~~--------~h~~~v~~~~~s~~~~~l~s 476 (583)
.+ .++ .-.-...+++++|+++.++.
T Consensus 381 g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaV 460 (603)
T KOG0318|consen 381 GWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAV 460 (603)
T ss_pred ecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEE
Confidence 00 000 01223567789999999999
Q ss_pred eecCCcEEEEEccCCCC-CceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEE-eecccccceeeEEecC
Q psy14906 477 GGNDQTVKVWHFKQTGK-PPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIR-KLSGHMGQLTDADFSP 554 (583)
Q Consensus 477 ~~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~h~~~v~~l~~s~ 554 (583)
|+.|+.|+||.+..... +.....++.++++++++|||+.|||++...+.+.+||+++.+... ...-|.+.|.+++|+|
T Consensus 461 GG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP 540 (603)
T KOG0318|consen 461 GGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSP 540 (603)
T ss_pred ecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCC
Confidence 99999999999988632 233567788999999999999999999999999999999887743 3345999999999999
Q ss_pred CCcEEEEEeCCCeEEEEeCCCcc
Q psy14906 555 DSRWLITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 555 d~~~l~s~~~d~~i~vw~~~~~~ 577 (583)
+..++|||+.|..|.||+++...
T Consensus 541 ~n~~vATGSlDt~Viiysv~kP~ 563 (603)
T KOG0318|consen 541 NNKLVATGSLDTNVIIYSVKKPA 563 (603)
T ss_pred CceEEEeccccceEEEEEccChh
Confidence 99999999999999999997643
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-51 Score=377.13 Aligned_cols=436 Identities=17% Similarity=0.276 Sum_probs=367.9
Q ss_pred EEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeC---eEEEEEcCCeEEEEec-cceeeeeecccCccEEEE--ccC
Q psy14906 47 FVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDF---FHIYTSANNIIYAWRR-GIDIVGTYKGHTSPVHLI--LPF 120 (583)
Q Consensus 47 i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~---~~~~~~~~~~i~vw~~-~~~~~~~~~~h~~~v~~i--s~~ 120 (583)
.++-.||.|++|+..+......+.||+.+|+++.||. ++++++.|+.|.+||+ +..-+..|+||...|+.+ ..+
T Consensus 81 AVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~ 160 (888)
T KOG0306|consen 81 AVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALFLNG 160 (888)
T ss_pred EEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhccCC
Confidence 3444999999999999999999999999999999964 7899999999999996 566788899999999986 566
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccC-------
Q psy14906 121 GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILT------- 193 (583)
Q Consensus 121 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~------- 193 (583)
.++|++.+.|+.|++||+++..+..+.- .|.+.++.+++.+ +.++++..|+.+++|++..
T Consensus 161 ~~~lvS~sKDs~iK~WdL~tqhCf~Thv-----------d~r~Eiw~l~~~~--~~lvt~~~dse~~v~~L~~~~D~~~~ 227 (888)
T KOG0306|consen 161 DSFLVSVSKDSMIKFWDLETQHCFETHV-----------DHRGEIWALVLDE--KLLVTAGTDSELKVWELAFEDDEKET 227 (888)
T ss_pred CeEEEEeccCceEEEEecccceeeeEEe-----------cccceEEEEEEec--ceEEEEecCCceEEEEeecccccccc
Confidence 7899999999999999999999998887 8888999999886 7888888888899998811
Q ss_pred --------------------------------------------------------------------------------
Q psy14906 194 -------------------------------------------------------------------------------- 193 (583)
Q Consensus 194 -------------------------------------------------------------------------------- 193 (583)
T Consensus 228 ~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl 307 (888)
T KOG0306|consen 228 NRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSL 307 (888)
T ss_pred cccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhH
Confidence
Q ss_pred -------------------------Cce---------------------e---------EEEeccCCCeEEEEEecCCCC
Q psy14906 194 -------------------------DES---------------------L---------MEFIQTWGPVTALSFRTDGPP 218 (583)
Q Consensus 194 -------------------------~~~---------------------~---------~~~~~~~~~v~~~~~~~~~~~ 218 (583)
+.. . .++.+|...|.+++++.+..
T Consensus 308 ~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~- 386 (888)
T KOG0306|consen 308 SDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSI- 386 (888)
T ss_pred HHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCce-
Confidence 000 0 11236677888999998886
Q ss_pred EEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCe
Q psy14906 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPN 298 (583)
Q Consensus 219 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~ 298 (583)
++++|+ .+.+++|+..+.++++++. .+.+.+..|.|.++++++|...|.+.+||+. ....+.+.+.|.+.+.
T Consensus 387 ~~~Sga-~~SikiWn~~t~kciRTi~---~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdla----S~~l~Eti~AHdgaIW 458 (888)
T KOG0306|consen 387 LLASGA-GESIKIWNRDTLKCIRTIT---CGYILASKFVPGDRYIVLGTKNGELQVFDLA----SASLVETIRAHDGAIW 458 (888)
T ss_pred eeeecC-CCcEEEEEccCcceeEEec---cccEEEEEecCCCceEEEeccCCceEEEEee----hhhhhhhhhcccccee
Confidence 556555 5789999999999999982 3488999999999999999999999999775 4566777889999999
Q ss_pred eEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEE
Q psy14906 299 YIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIA 378 (583)
Q Consensus 299 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (583)
+++.+| |+..+++++.|.+|++||..--....
T Consensus 459 si~~~p-D~~g~vT~saDktVkfWdf~l~~~~~----------------------------------------------- 490 (888)
T KOG0306|consen 459 SISLSP-DNKGFVTGSADKTVKFWDFKLVVSVP----------------------------------------------- 490 (888)
T ss_pred eeeecC-CCCceEEecCCcEEEEEeEEEEeccC-----------------------------------------------
Confidence 999998 89999999999999999975321100
Q ss_pred EEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCc
Q psy14906 379 AIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGH 458 (583)
Q Consensus 379 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h 458 (583)
++.. ++..+.... ...-...+.|+.+||||++|+++--|.++++|-+.+-+....+ .+|
T Consensus 491 --gt~~---k~lsl~~~r-----------tLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsL-----YGH 549 (888)
T KOG0306|consen 491 --GTQK---KVLSLKHTR-----------TLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSL-----YGH 549 (888)
T ss_pred --cccc---eeeeeccce-----------EEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeee-----ccc
Confidence 0000 000000000 0001167999999999999999999999999999999888888 899
Q ss_pred ccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEE-eeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceE
Q psy14906 459 VGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS-IKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTII 537 (583)
Q Consensus 459 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 537 (583)
.-+|.|+..+||+++++||+.|.+|++|-++-+ .+-+. +.|...|.++.|.|+..++++++.|+.|+-||-+..+.+
T Consensus 550 kLPV~smDIS~DSklivTgSADKnVKiWGLdFG--DCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~i 627 (888)
T KOG0306|consen 550 KLPVLSMDISPDSKLIVTGSADKNVKIWGLDFG--DCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEI 627 (888)
T ss_pred ccceeEEeccCCcCeEEeccCCCceEEeccccc--hhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhh
Confidence 999999999999999999999999999999988 66654 567789999999999999999999999999999999999
Q ss_pred EeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCC
Q psy14906 538 RKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575 (583)
Q Consensus 538 ~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~ 575 (583)
+.+.+|...|++++.+|+|.+++++|.|.+|++|....
T Consensus 628 q~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 628 QKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred eeeccchheeeeeEEcCCCCeEEeccCCceeEeeeccC
Confidence 99999999999999999999999999999999999654
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-50 Score=365.88 Aligned_cols=466 Identities=18% Similarity=0.281 Sum_probs=375.5
Q ss_pred ceeeeeeeeeeecCcccEEE-EEeCCCceEEEEeeCCeEEEEecCCcEEEeecC--CCCCCeEEEEe-eCe--EEEEEcC
Q psy14906 18 IFLRHRALGYVSNHLPVVAR-FIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSP--QHEDDITCLSS-DFF--HIYTSAN 91 (583)
Q Consensus 18 ~~~~~~~~g~~~~~~~~~~~-~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~--~h~~~v~~~~~-~~~--~~~~~~~ 91 (583)
-|+|-.++|.+.+...+++- ....+++.+++.+....|.+||+++++..+.+. .....|+|+.. ++. +++|-.|
T Consensus 7 rye~~~~fgviaS~~aN~~~~~~~~~~Gr~va~~a~E~vn~WdlRtge~~~~l~~~~~k~evt~l~~~~d~l~lAVGYaD 86 (888)
T KOG0306|consen 7 RYEPAAVFGVIASEVANINFVVKRSGKGRAVAVSALEQVNIWDLRTGEIEKKLILLKKKAEVTCLRSSDDILLLAVGYAD 86 (888)
T ss_pred cccccceeeeeecCccceeEEEeecCCCcEEEEeccccEeEEeeecchhhhhhhhhcccceEEEeeccCCcceEEEEecC
Confidence 36676777755554443322 222345778888899999999999996665543 34468999987 443 3666699
Q ss_pred CeEEEEecc-ceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEE
Q psy14906 92 NIIYAWRRG-IDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVL 168 (583)
Q Consensus 92 ~~i~vw~~~-~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 168 (583)
|.|+||+.. ....-++.||...|+++ ...|..||||+.|+.|.+||+-...-+.++. +|...|+.+
T Consensus 87 GsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~-----------GHkd~iT~~ 155 (888)
T KOG0306|consen 87 GSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLR-----------GHKDSITQA 155 (888)
T ss_pred ceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEee-----------cchHHHhHH
Confidence 999999964 56778899999999987 8899999999999999999999988888998 999999999
Q ss_pred eeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC-----------
Q psy14906 169 EPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR----------- 237 (583)
Q Consensus 169 ~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----------- 237 (583)
-|..+.+.|++.+.|+.|++||+++..+..+.-.|.+.++++++.+ + ++++++.|+.+++|++...
T Consensus 156 ~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~--~-~lvt~~~dse~~v~~L~~~~D~~~~~~~~s 232 (888)
T KOG0306|consen 156 LFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDE--K-LLVTAGTDSELKVWELAFEDDEKETNRYIS 232 (888)
T ss_pred hccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEec--c-eEEEEecCCceEEEEeecccccccccccce
Confidence 9999899999999999999999999999999999999999999998 3 7899999999999998210
Q ss_pred -eehhhhhhc----------------------------------------------------------------------
Q psy14906 238 -QVENQIKKA---------------------------------------------------------------------- 246 (583)
Q Consensus 238 -~~~~~~~~~---------------------------------------------------------------------- 246 (583)
+...++.+.
T Consensus 233 ~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~ 312 (888)
T KOG0306|consen 233 TKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIK 312 (888)
T ss_pred eeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHH
Confidence 000000000
Q ss_pred ------cccceEEEEEecCCC---EEEEEeCCCeEEEEEccCCCCC-cee----eEEeccCCCCCeeEEEeeCCCCEEEE
Q psy14906 247 ------HRKVVTGAHFLYNEP---LLVTSSPDNTLKLWIFDKADGN-GRL----LRIREGHSAPPNYIQFYGNSSDNILS 312 (583)
Q Consensus 247 ------~~~~v~~~~~~~~~~---~l~s~~~d~~i~~w~~~~~~~~-~~~----~~~~~~~~~~v~~~~~~~~~~~~l~~ 312 (583)
-...+.++.|.|.+. .|+. -.++++..+.++..... ..+ ...+.+|...|.+++++. +...+++
T Consensus 313 r~~~ir~~~kiks~dv~~~~~~~~~lv~-l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~-d~~~~~S 390 (888)
T KOG0306|consen 313 RLETIRTSAKIKSFDVTPSGGTENTLVL-LANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSS-DSILLAS 390 (888)
T ss_pred HHHheechhheeEEEEEecCCcceeEEE-eecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeec-Cceeeee
Confidence 013456666666543 2333 45667777766652111 111 134678999999999984 5545555
Q ss_pred eeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeec
Q psy14906 313 AAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSF 392 (583)
Q Consensus 313 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 392 (583)
+ ..+.+++|+..+.++++++.-
T Consensus 391 g-a~~SikiWn~~t~kciRTi~~--------------------------------------------------------- 412 (888)
T KOG0306|consen 391 G-AGESIKIWNRDTLKCIRTITC--------------------------------------------------------- 412 (888)
T ss_pred c-CCCcEEEEEccCcceeEEecc---------------------------------------------------------
Confidence 4 457999999999988877632
Q ss_pred CcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc
Q psy14906 393 YKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472 (583)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 472 (583)
..+.+..|-|.++++++|..+|.+.+||+.+...+.+. ++|.+.|++++.+||++
T Consensus 413 --------------------~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti-----~AHdgaIWsi~~~pD~~ 467 (888)
T KOG0306|consen 413 --------------------GYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETI-----RAHDGAIWSISLSPDNK 467 (888)
T ss_pred --------------------ccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhh-----hccccceeeeeecCCCC
Confidence 45788999999999999999999999999999999888 79999999999999999
Q ss_pred EEEEeecCCcEEEEEccCCCC-----------CceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeec
Q psy14906 473 IVISGGNDQTVKVWHFKQTGK-----------PPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLS 541 (583)
Q Consensus 473 ~l~s~~~dg~i~iwd~~~~~~-----------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 541 (583)
.+++|+.|.+|++||..-... ...+.++....|.|+.+||||++||++--|++++||-+++.+....+.
T Consensus 468 g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLY 547 (888)
T KOG0306|consen 468 GFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLY 547 (888)
T ss_pred ceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeec
Confidence 999999999999999753210 112456667899999999999999999999999999999999999999
Q ss_pred ccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 542 GHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 542 ~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
||.-||.|+..|||++.++|||.|.+|++|-++-|.|.++|
T Consensus 548 GHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~ 588 (888)
T KOG0306|consen 548 GHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSF 588 (888)
T ss_pred ccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhh
Confidence 99999999999999999999999999999999999988765
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-47 Score=350.30 Aligned_cols=440 Identities=19% Similarity=0.234 Sum_probs=364.2
Q ss_pred cEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eCeEEEE-EcCCeEEEEeccce-eeeeecc
Q psy14906 34 VVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DFFHIYT-SANNIIYAWRRGID-IVGTYKG 109 (583)
Q Consensus 34 ~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~-~~~~~i~vw~~~~~-~~~~~~~ 109 (583)
.-+.|.|||.. +....++.|-++|+++.+-....-.+...|++++. +|.++.+ ..+|...+-+...+ .++.+ .
T Consensus 18 Gnl~ft~dG~s--viSPvGNrvsv~dLknN~S~Tl~~e~~~NI~~ialSp~g~lllavdE~g~~~lvs~~~r~Vlh~f-~ 94 (893)
T KOG0291|consen 18 GNLVFTKDGNS--VISPVGNRVSVFDLKNNKSYTLPLETRYNITRIALSPDGTLLLAVDERGRALLVSLLSRSVLHRF-N 94 (893)
T ss_pred CcEEECCCCCE--EEeccCCEEEEEEccCCcceeEEeecCCceEEEEeCCCceEEEEEcCCCcEEEEecccceeeEEE-e
Confidence 44678777777 77889999999999987666555568889998887 5555554 56677777775443 33333 3
Q ss_pred cCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcE--------EEEeeccCCceEEecccCCcceEEEeeCCCCCEEEE
Q psy14906 110 HTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEET--------YLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV 179 (583)
Q Consensus 110 h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 179 (583)
...+|.++ ||||+++|.+. .+.+.||....... ..++. +|-..|.++.|+.|.++|++
T Consensus 95 fk~~v~~i~fSPng~~fav~~-gn~lqiw~~P~~~~~~~~pFvl~r~~~-----------g~fddi~si~Ws~DSr~l~~ 162 (893)
T KOG0291|consen 95 FKRGVGAIKFSPNGKFFAVGC-GNLLQIWHAPGEIKNEFNPFVLHRTYL-----------GHFDDITSIDWSDDSRLLVT 162 (893)
T ss_pred ecCccceEEECCCCcEEEEEe-cceeEEEecCcchhcccCcceEeeeec-----------CCccceeEEEeccCCceEEe
Confidence 45667776 99999999876 67899999775322 22222 88999999999999999999
Q ss_pred EecCCeEEEEEccCCce--eEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC---------------------
Q psy14906 180 GLSNKKIILHNILTDES--LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED--------------------- 236 (583)
Q Consensus 180 ~~~d~~i~iw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~--------------------- 236 (583)
|+.|-.+++|.++..+. ...+.+|++.|.+.-|..+.. -+++.+.||.+.+|....
T Consensus 163 gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~-~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~ 241 (893)
T KOG0291|consen 163 GSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSL-DLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMD 241 (893)
T ss_pred ccccceEEEEEeccccccceEeccCCCcceEEEEeccCcc-eEEEEecCceEEEEEecCCCccccccccccccccccccc
Confidence 99999999999987766 556779999999999999887 799999999999997761
Q ss_pred --Cee-h---------hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEee
Q psy14906 237 --RQV-E---------NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304 (583)
Q Consensus 237 --~~~-~---------~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 304 (583)
++. . +.+.......+++.+|++..+.|+++-..|...+|.+. ...++..+.-...+|..++|+.
T Consensus 242 ~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP----~f~lih~LSis~~~I~t~~~N~ 317 (893)
T KOG0291|consen 242 EDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELP----DFNLIHSLSISDQKILTVSFNS 317 (893)
T ss_pred ccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecC----CceEEEEeecccceeeEEEecc
Confidence 111 0 00101223679999999999999999999999999654 5678888887788999999995
Q ss_pred CCCCEEEEeeCC-CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecC
Q psy14906 305 NSSDNILSAAGD-STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTG 383 (583)
Q Consensus 305 ~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (583)
.|+.|+.|+.. |.+.+|+......+-
T Consensus 318 -tGDWiA~g~~klgQLlVweWqsEsYVl---------------------------------------------------- 344 (893)
T KOG0291|consen 318 -TGDWIAFGCSKLGQLLVWEWQSESYVL---------------------------------------------------- 344 (893)
T ss_pred -cCCEEEEcCCccceEEEEEeeccceee----------------------------------------------------
Confidence 79999998875 899999987653321
Q ss_pred CceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCee
Q psy14906 384 KNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVR 463 (583)
Q Consensus 384 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~ 463 (583)
.+.+|...+++++++|||+++++|++||.|++||..++-+..++ ..|+..|+
T Consensus 345 -----------------------KQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTF-----teHts~Vt 396 (893)
T KOG0291|consen 345 -----------------------KQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTF-----TEHTSGVT 396 (893)
T ss_pred -----------------------eccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEe-----ccCCCceE
Confidence 12234478999999999999999999999999999999999999 89999999
Q ss_pred EEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCC--eeeEEeccCCcEEEEEeCCc-eEEEEEccccceEEee
Q psy14906 464 GVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG--ISFFRTHQESSMLAVCLDDF-TVNIIDIDTCTIIRKL 540 (583)
Q Consensus 464 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~ 540 (583)
.+.|+..++.+++.+.||+|+.||+... +..+++..+.+ ..|++..|.|.++++|+.|. .|.+|++++|+++..+
T Consensus 397 ~v~f~~~g~~llssSLDGtVRAwDlkRY--rNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiL 474 (893)
T KOG0291|consen 397 AVQFTARGNVLLSSSLDGTVRAWDLKRY--RNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDIL 474 (893)
T ss_pred EEEEEecCCEEEEeecCCeEEeeeeccc--ceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehh
Confidence 9999999999999999999999999999 88899888765 57788888899999999885 7999999999999999
Q ss_pred cccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCc
Q psy14906 541 SGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576 (583)
Q Consensus 541 ~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~ 576 (583)
.||.++|.+++|+|++..||++|.|.+|++||+-..
T Consensus 475 sGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 475 SGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred cCCCCcceeeEEccccCeEEeccccceEEEEEeecc
Confidence 999999999999999999999999999999998543
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-49 Score=339.25 Aligned_cols=283 Identities=23% Similarity=0.291 Sum_probs=260.4
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecC-CCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTD-GPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
+...+|..+.|++|++.||+|+.+|.+++|+..+...+.+|.+|...|.++.|+|. ...-+++|+.||++++|++.+..
T Consensus 173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~ 252 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET 252 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCc
Confidence 66889999999999999999999999999999999999999999999999999998 24379999999999999999999
Q ss_pred ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCc
Q psy14906 239 VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDST 318 (583)
Q Consensus 239 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 318 (583)
++..+ .+|...|..++|+|+|++|+|++.|.+-++||+. ....+...+||...|.+++|.| ||..+++|+.|..
T Consensus 253 ~l~~l-~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~----tk~ElL~QEGHs~~v~~iaf~~-DGSL~~tGGlD~~ 326 (459)
T KOG0272|consen 253 PLQDL-EGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLE----TKSELLLQEGHSKGVFSIAFQP-DGSLAATGGLDSL 326 (459)
T ss_pred chhhh-hcchhhheeeeecCCCceeeecccccchhhcccc----cchhhHhhcccccccceeEecC-CCceeeccCccch
Confidence 99999 8999999999999999999999999999999776 4566667789999999999997 8999999999988
Q ss_pred EEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccc
Q psy14906 319 LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMD 398 (583)
Q Consensus 319 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 398 (583)
-++||++++.++
T Consensus 327 ~RvWDlRtgr~i-------------------------------------------------------------------- 338 (459)
T KOG0272|consen 327 GRVWDLRTGRCI-------------------------------------------------------------------- 338 (459)
T ss_pred hheeecccCcEE--------------------------------------------------------------------
Confidence 888888776432
Q ss_pred ceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee
Q psy14906 399 DMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG 478 (583)
Q Consensus 399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 478 (583)
..+ .+|..+|.+++|+|+|..||||+
T Consensus 339 -------------------------------------------------m~L-----~gH~k~I~~V~fsPNGy~lATgs 364 (459)
T KOG0272|consen 339 -------------------------------------------------MFL-----AGHIKEILSVAFSPNGYHLATGS 364 (459)
T ss_pred -------------------------------------------------EEe-----cccccceeeEeECCCceEEeecC
Confidence 223 68999999999999999999999
Q ss_pred cCCcEEEEEccCCCCCceEEee-ccCCeeeEEecc-CCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCC
Q psy14906 479 NDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQ-ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDS 556 (583)
Q Consensus 479 ~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~ 556 (583)
.|++++|||++.. ..+..+. |.+-|+.+.|+| .|.+|++++.|++++||...++.+++.+.||.+.|.++++++|+
T Consensus 365 ~Dnt~kVWDLR~r--~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~ 442 (459)
T KOG0272|consen 365 SDNTCKVWDLRMR--SELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDS 442 (459)
T ss_pred CCCcEEEeeeccc--ccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCC
Confidence 9999999999988 6676665 457899999998 78899999999999999999999999999999999999999999
Q ss_pred cEEEEEeCCCeEEEEe
Q psy14906 557 RWLITASMDCTIRVWD 572 (583)
Q Consensus 557 ~~l~s~~~d~~i~vw~ 572 (583)
++++|++.|.++++|.
T Consensus 443 ~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 443 QAIATSSFDRTIKLWR 458 (459)
T ss_pred ceEEEeccCceeeecc
Confidence 9999999999999995
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=306.43 Aligned_cols=289 Identities=20% Similarity=0.315 Sum_probs=264.9
Q ss_pred eeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEE
Q psy14906 102 DIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV 179 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 179 (583)
+..++|+||.+.|.++ ++|.++|++++.||.+.|||.-+....+.++ -....|..++|+|.|+++|+
T Consensus 46 ~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haip-----------l~s~WVMtCA~sPSg~~VAc 114 (343)
T KOG0286|consen 46 RTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIP-----------LPSSWVMTCAYSPSGNFVAC 114 (343)
T ss_pred eeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEe-----------cCceeEEEEEECCCCCeEEe
Confidence 3458899999999998 9999999999999999999999998888888 55889999999999999999
Q ss_pred EecCCeEEEEEccCC------ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEE
Q psy14906 180 GLSNKKIILHNILTD------ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTG 253 (583)
Q Consensus 180 ~~~d~~i~iw~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~ 253 (583)
|+-|+...||++.+. ...+++.+|.+-+.|+.|.+|+. |++++.|.+..+||+++++.+..+ .+|.+.|.+
T Consensus 115 GGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~--ilT~SGD~TCalWDie~g~~~~~f-~GH~gDV~s 191 (343)
T KOG0286|consen 115 GGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNH--ILTGSGDMTCALWDIETGQQTQVF-HGHTGDVMS 191 (343)
T ss_pred cCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCCCc--eEecCCCceEEEEEcccceEEEEe-cCCcccEEE
Confidence 999999999999865 34566889999999999999874 999999999999999999999999 899999999
Q ss_pred EEEec-CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccccccee
Q psy14906 254 AHFLY-NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKN 332 (583)
Q Consensus 254 ~~~~~-~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 332 (583)
+.++| +++.+++|+-|+..++||+. .+...+++.+|...|+++.|.| +|.-+++|+.|++.++||++..+.+..
T Consensus 192 lsl~p~~~ntFvSg~cD~~aklWD~R----~~~c~qtF~ghesDINsv~ffP-~G~afatGSDD~tcRlyDlRaD~~~a~ 266 (343)
T KOG0286|consen 192 LSLSPSDGNTFVSGGCDKSAKLWDVR----SGQCVQTFEGHESDINSVRFFP-SGDAFATGSDDATCRLYDLRADQELAV 266 (343)
T ss_pred EecCCCCCCeEEecccccceeeeecc----CcceeEeecccccccceEEEcc-CCCeeeecCCCceeEEEeecCCcEEee
Confidence 99999 99999999999999999775 6689999999999999999998 899999999999999999998776554
Q ss_pred eccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCC
Q psy14906 333 LGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQ 412 (583)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (583)
+..... .
T Consensus 267 ys~~~~-------------------------------------------------------------------------~ 273 (343)
T KOG0286|consen 267 YSHDSI-------------------------------------------------------------------------I 273 (343)
T ss_pred eccCcc-------------------------------------------------------------------------c
Confidence 422111 1
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 487 (583)
..+++++||..|++|++|..|..+.+||.-.++....+ .+|..+|+++..+|||..+++|+.|.+++||.
T Consensus 274 ~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L-----~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 274 CGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVL-----AGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred CCceeEEEcccccEEEeeecCCceeEeeccccceEEEe-----eccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 57999999999999999999999999999999999998 89999999999999999999999999999994
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-47 Score=325.49 Aligned_cols=281 Identities=19% Similarity=0.262 Sum_probs=260.7
Q ss_pred ccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCC--CCEEEEEecCC
Q psy14906 109 GHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV--VDIIGVGLSNK 184 (583)
Q Consensus 109 ~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~d~ 184 (583)
|.+.+|... +.|++.||||+.+|.+++|+..+...+.++. +|...+.++.|+|. +..||+|+.||
T Consensus 173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~-----------gH~~~v~~~~fhP~~~~~~lat~s~Dg 241 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLR-----------GHTSRVGAAVFHPVDSDLNLATASADG 241 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEe-----------ccccceeeEEEccCCCccceeeeccCC
Confidence 556677654 9999999999999999999999999999998 99999999999997 56999999999
Q ss_pred eEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEE
Q psy14906 185 KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264 (583)
Q Consensus 185 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 264 (583)
++++|++.+..++..+.+|...|..++|+|+|+ +|++++.|.+-++||+++++.+... .||...|.+++|.|||.+++
T Consensus 242 tvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~-~L~TasfD~tWRlWD~~tk~ElL~Q-EGHs~~v~~iaf~~DGSL~~ 319 (459)
T KOG0272|consen 242 TVKLWKLSQETPLQDLEGHLARVSRVAFHPSGK-FLGTASFDSTWRLWDLETKSELLLQ-EGHSKGVFSIAFQPDGSLAA 319 (459)
T ss_pred ceeeeccCCCcchhhhhcchhhheeeeecCCCc-eeeecccccchhhcccccchhhHhh-cccccccceeEecCCCceee
Confidence 999999998899999999999999999999999 9999999999999999999888887 89999999999999999999
Q ss_pred EEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhh
Q psy14906 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLK 344 (583)
Q Consensus 265 s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 344 (583)
+|+.|..-+|||+. +++++..+.+|..+|.++.|+| +|..|++|+.|++++|||++..+....+
T Consensus 320 tGGlD~~~RvWDlR----tgr~im~L~gH~k~I~~V~fsP-NGy~lATgs~Dnt~kVWDLR~r~~ly~i----------- 383 (459)
T KOG0272|consen 320 TGGLDSLGRVWDLR----TGRCIMFLAGHIKEILSVAFSP-NGYHLATGSSDNTCKVWDLRMRSELYTI----------- 383 (459)
T ss_pred ccCccchhheeecc----cCcEEEEecccccceeeEeECC-CceEEeecCCCCcEEEeeecccccceec-----------
Confidence 99999999999776 7899999999999999999998 8999999999999999999876654332
Q ss_pred hhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc-C
Q psy14906 345 RKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH-C 423 (583)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~ 423 (583)
..|.+-|+.+.|+| .
T Consensus 384 ----------------------------------------------------------------pAH~nlVS~Vk~~p~~ 399 (459)
T KOG0272|consen 384 ----------------------------------------------------------------PAHSNLVSQVKYSPQE 399 (459)
T ss_pred ----------------------------------------------------------------ccccchhhheEecccC
Confidence 12236789999999 6
Q ss_pred CcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE
Q psy14906 424 GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487 (583)
Q Consensus 424 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 487 (583)
|.+|++++.|+++++|...+..++..+ .+|.+.|.++.+++|++++++++.|.++++|.
T Consensus 400 g~fL~TasyD~t~kiWs~~~~~~~ksL-----aGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 400 GYFLVTASYDNTVKIWSTRTWSPLKSL-----AGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred CeEEEEcccCcceeeecCCCcccchhh-----cCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 899999999999999999999999999 89999999999999999999999999999995
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-46 Score=302.12 Aligned_cols=290 Identities=21% Similarity=0.331 Sum_probs=265.9
Q ss_pred eEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEE
Q psy14906 197 LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWI 276 (583)
Q Consensus 197 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~ 276 (583)
.+.+++|.+.|.++.|++|.+ .+++++.||.+.|||.-+...++.+ .-....|..++|+|.|+++|+|+.|+...||+
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr-~ivSaSqDGklIvWDs~TtnK~hai-pl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ 125 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSR-RIVSASQDGKLIVWDSFTTNKVHAI-PLPSSWVMTCAYSPSGNFVACGGLDNKCSIYP 125 (343)
T ss_pred EEEecccccceeeeEecCCcC-eEEeeccCCeEEEEEcccccceeEE-ecCceeEEEEEECCCCCeEEecCcCceeEEEe
Confidence 367899999999999999999 8999999999999999988777777 55678999999999999999999999999998
Q ss_pred ccCC--CCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcccc
Q psy14906 277 FDKA--DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNE 354 (583)
Q Consensus 277 ~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (583)
+... ++..+..+.+.+|.+.+.++.|. +...|++++.|.+..+||+++++....+.
T Consensus 126 ls~~d~~g~~~v~r~l~gHtgylScC~f~--dD~~ilT~SGD~TCalWDie~g~~~~~f~-------------------- 183 (343)
T KOG0286|consen 126 LSTRDAEGNVRVSRELAGHTGYLSCCRFL--DDNHILTGSGDMTCALWDIETGQQTQVFH-------------------- 183 (343)
T ss_pred cccccccccceeeeeecCccceeEEEEEc--CCCceEecCCCceEEEEEcccceEEEEec--------------------
Confidence 8755 34456677899999999999997 46799999999999999999998766542
Q ss_pred ccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc-CCcEEEEEecC
Q psy14906 355 KFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH-CGNFVLIGYSS 433 (583)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d 433 (583)
.|...|.++.++| +++.+++|+-|
T Consensus 184 -------------------------------------------------------GH~gDV~slsl~p~~~ntFvSg~cD 208 (343)
T KOG0286|consen 184 -------------------------------------------------------GHTGDVMSLSLSPSDGNTFVSGGCD 208 (343)
T ss_pred -------------------------------------------------------CCcccEEEEecCCCCCCeEEecccc
Confidence 2337799999999 99999999999
Q ss_pred ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc---CCeeeEEe
Q psy14906 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD---NGISFFRT 510 (583)
Q Consensus 434 g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~~~~~ 510 (583)
+..++||++.+...+.| .+|...|+++.|.|+|.-+++|++|++.++||++.. +.+..+.+. .+|++++|
T Consensus 209 ~~aklWD~R~~~c~qtF-----~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD--~~~a~ys~~~~~~gitSv~F 281 (343)
T KOG0286|consen 209 KSAKLWDVRSGQCVQTF-----EGHESDINSVRFFPSGDAFATGSDDATCRLYDLRAD--QELAVYSHDSIICGITSVAF 281 (343)
T ss_pred cceeeeeccCcceeEee-----cccccccceEEEccCCCeeeecCCCceeEEEeecCC--cEEeeeccCcccCCceeEEE
Confidence 99999999999999999 899999999999999999999999999999999998 788777765 48999999
Q ss_pred ccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEe
Q psy14906 511 HQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 511 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~ 572 (583)
|..|++|++|..|.++.+||.-.++.+..|.+|..+|.+|..+|||.-++||+.|.+++||.
T Consensus 282 S~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 282 SKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred cccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 99999999999999999999999999999999999999999999999999999999999994
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-44 Score=292.23 Aligned_cols=295 Identities=19% Similarity=0.251 Sum_probs=248.2
Q ss_pred CcEEEeecCCCCCCeEEEEe---eC-eEEEEEcCCeEEEEecc------ceeeeeecccCccEEEE--ccCCCEEEEEeC
Q psy14906 62 HFKLLSVSPQHEDDITCLSS---DF-FHIYTSANNIIYAWRRG------IDIVGTYKGHTSPVHLI--LPFGPHLISVDE 129 (583)
Q Consensus 62 ~~~~~~~~~~h~~~v~~~~~---~~-~~~~~~~~~~i~vw~~~------~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~ 129 (583)
...+..++++|++.|+.++. ++ .++.++.|.++.+|++. +..++.|+||+..|..+ ++||++.++++.
T Consensus 4 ~l~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw 83 (315)
T KOG0279|consen 4 QLVLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASW 83 (315)
T ss_pred hheeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccc
Confidence 45566789999999999997 23 57778899999999973 56789999999999986 999999999999
Q ss_pred CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEecc--CCCe
Q psy14906 130 ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQT--WGPV 207 (583)
Q Consensus 130 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~--~~~v 207 (583)
|+++++||+.+|+..+.+. +|...|.+++|++|.+.+++|+.|.+|++||.. +++..++..+ .+.|
T Consensus 84 D~~lrlWDl~~g~~t~~f~-----------GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~~~~WV 151 (315)
T KOG0279|consen 84 DGTLRLWDLATGESTRRFV-----------GHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDSHREWV 151 (315)
T ss_pred cceEEEEEecCCcEEEEEE-----------ecCCceEEEEecCCCceeecCCCcceeeeeeec-ccEEEEEecCCCcCcE
Confidence 9999999999999999988 999999999999999999999999999999997 5555555533 6899
Q ss_pred EEEEEecCC-CCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCcee
Q psy14906 208 TALSFRTDG-PPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRL 286 (583)
Q Consensus 208 ~~~~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~ 286 (583)
+|+.|+|+. +.++++++.|++|++||+++.+....+ .+|++.++.++++|||.+.++|+.||.+.+||++ +++.
T Consensus 152 scvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~-~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~----~~k~ 226 (315)
T KOG0279|consen 152 SCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTF-IGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLN----EGKN 226 (315)
T ss_pred EEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhcc-ccccccEEEEEECCCCCEEecCCCCceEEEEEcc----CCce
Confidence 999999984 349999999999999999999999998 8999999999999999999999999999999887 4555
Q ss_pred eEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeee
Q psy14906 287 LRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSF 366 (583)
Q Consensus 287 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (583)
+..+ +|...|.+++|+| +. +.++...+..|+|||++++..+..+......+
T Consensus 227 lysl-~a~~~v~sl~fsp-nr-ywL~~at~~sIkIwdl~~~~~v~~l~~d~~g~-------------------------- 277 (315)
T KOG0279|consen 227 LYSL-EAFDIVNSLCFSP-NR-YWLCAATATSIKIWDLESKAVVEELKLDGIGP-------------------------- 277 (315)
T ss_pred eEec-cCCCeEeeEEecC-Cc-eeEeeccCCceEEEeccchhhhhhcccccccc--------------------------
Confidence 5555 4778999999998 44 55555556679999999988877653321100
Q ss_pred ecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcc
Q psy14906 367 GLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQ 442 (583)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~ 442 (583)
..........+++|++||..|++|..|+.|++|.+.
T Consensus 278 ----------------------------------------s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 278 ----------------------------------------SSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred ----------------------------------------ccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 000011346788999999999999999999999874
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-43 Score=297.56 Aligned_cols=331 Identities=19% Similarity=0.287 Sum_probs=291.9
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
.|...|.+++.+|+.+++|+|+.|..-.+|++.+++....+.+|+..|+++.|+.+|. +||+|+.+|.|+||+..++..
T Consensus 62 ~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~Fshdgt-lLATGdmsG~v~v~~~stg~~ 140 (399)
T KOG0296|consen 62 KHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGT-LLATGDMSGKVLVFKVSTGGE 140 (399)
T ss_pred hcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCce-EEEecCCCccEEEEEcccCce
Confidence 9999999999999999999999999999999999999999999999999999999999 999999999999999999988
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
...+ ...-..+.-+.|+|.+..|+.|+.||.+-.|.+. +....+.+.+|..++++-.|.| +|++++++..||+|
T Consensus 141 ~~~~-~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip----~~~~~kv~~Gh~~~ct~G~f~p-dGKr~~tgy~dgti 214 (399)
T KOG0296|consen 141 QWKL-DQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIP----SQALCKVMSGHNSPCTCGEFIP-DGKRILTGYDDGTI 214 (399)
T ss_pred EEEe-ecccCceEEEEecccccEEEeecCCCcEEEEECC----CcceeeEecCCCCCcccccccC-CCceEEEEecCceE
Confidence 8887 4566788899999999999999999999999775 3467788999999999999998 79999999999999
Q ss_pred EEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 320 RIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 320 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
++||+.++++...+....
T Consensus 215 ~~Wn~ktg~p~~~~~~~e-------------------------------------------------------------- 232 (399)
T KOG0296|consen 215 IVWNPKTGQPLHKITQAE-------------------------------------------------------------- 232 (399)
T ss_pred EEEecCCCceeEEecccc--------------------------------------------------------------
Confidence 999999997765542211
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCC---CCCCCcccCeeEEEE---eCCCcE
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGH---DNQPGHVGGVRGVVS---DNLNQI 473 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~h~~~v~~~~~---s~~~~~ 473 (583)
....+++.++..+..++.|+.++.+++.+..+|+.+..... .....+...+.++.+ +..-.+
T Consensus 233 ------------~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL 300 (399)
T KOG0296|consen 233 ------------GLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPL 300 (399)
T ss_pred ------------cCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccch
Confidence 14567888888889999999999999888888887665531 011245555555555 445568
Q ss_pred EEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEec
Q psy14906 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFS 553 (583)
Q Consensus 474 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s 553 (583)
.|+|+.||+|.|||+... ++.....+..+|..+.|-+ ..+|++++.+|.|+.||.++|+++..+.||..+|.+++++
T Consensus 301 ~A~G~vdG~i~iyD~a~~--~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls 377 (399)
T KOG0296|consen 301 AACGSVDGTIAIYDLAAS--TLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALS 377 (399)
T ss_pred hhcccccceEEEEecccc--hhheeccCCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEEecCchheeEEEEc
Confidence 899999999999999998 8888899999999999998 7899999999999999999999999999999999999999
Q ss_pred CCCcEEEEEeCCCeEEEEeCC
Q psy14906 554 PDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 554 ~d~~~l~s~~~d~~i~vw~~~ 574 (583)
|+.++++|+|.|++.+||++.
T Consensus 378 ~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 378 PQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred CCCcEEEEecCCCeEEEEecC
Confidence 999999999999999999875
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-43 Score=286.25 Aligned_cols=292 Identities=20% Similarity=0.289 Sum_probs=254.6
Q ss_pred ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC-----CeehhhhhhccccceEEEEEecCCCEEEEEeCC
Q psy14906 195 ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED-----RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD 269 (583)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 269 (583)
....++++|++.|+.++..+.++.++++++.|..+.+|++.. |..++.+ .||...|..+..++||++.++++.|
T Consensus 6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~-~GHsH~v~dv~~s~dg~~alS~swD 84 (315)
T KOG0279|consen 6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRL-TGHSHFVSDVVLSSDGNFALSASWD 84 (315)
T ss_pred eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeee-eccceEecceEEccCCceEEecccc
Confidence 345678899999999999999877999999999999999864 5667788 8999999999999999999999999
Q ss_pred CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcch
Q psy14906 270 NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRL 349 (583)
Q Consensus 270 ~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (583)
+++++||+. .++..+.+.+|...|.+++|+| |..++++|+.|.+|++|+............
T Consensus 85 ~~lrlWDl~----~g~~t~~f~GH~~dVlsva~s~-dn~qivSGSrDkTiklwnt~g~ck~t~~~~-------------- 145 (315)
T KOG0279|consen 85 GTLRLWDLA----TGESTRRFVGHTKDVLSVAFST-DNRQIVSGSRDKTIKLWNTLGVCKYTIHED-------------- 145 (315)
T ss_pred ceEEEEEec----CCcEEEEEEecCCceEEEEecC-CCceeecCCCcceeeeeeecccEEEEEecC--------------
Confidence 999999775 4578888999999999999997 889999999999999999876432211100
Q ss_pred hccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC--CcEE
Q psy14906 350 EKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC--GNFV 427 (583)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l 427 (583)
.+...|.|++|+|+ ..++
T Consensus 146 ------------------------------------------------------------~~~~WVscvrfsP~~~~p~I 165 (315)
T KOG0279|consen 146 ------------------------------------------------------------SHREWVSCVRFSPNESNPII 165 (315)
T ss_pred ------------------------------------------------------------CCcCcEEEEEEcCCCCCcEE
Confidence 00167999999998 6899
Q ss_pred EEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeee
Q psy14906 428 LIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF 507 (583)
Q Consensus 428 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~ 507 (583)
+.++.|++|++||+.+.+....+ .+|++.++.+++||||.+.++|+.||.+.+||++.+ +.++.+.+...|.+
T Consensus 166 vs~s~DktvKvWnl~~~~l~~~~-----~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~--k~lysl~a~~~v~s 238 (315)
T KOG0279|consen 166 VSASWDKTVKVWNLRNCQLRTTF-----IGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEG--KNLYSLEAFDIVNS 238 (315)
T ss_pred EEccCCceEEEEccCCcchhhcc-----ccccccEEEEEECCCCCEEecCCCCceEEEEEccCC--ceeEeccCCCeEee
Confidence 99999999999999999999888 799999999999999999999999999999999999 88999999999999
Q ss_pred EEeccCCcEEEEEeCCceEEEEEccccceEEeecc----c-----ccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 508 FRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG----H-----MGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 508 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----h-----~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
++|+|+.-.|+.+... .|+|||++++.++..++. . ...-.+++|++||+.|+.+-.|+.|++|.+.
T Consensus 239 l~fspnrywL~~at~~-sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 239 LCFSPNRYWLCAATAT-SIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred EEecCCceeEeeccCC-ceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 9999988777776655 599999999988766542 1 2234668999999999999999999999875
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-43 Score=279.76 Aligned_cols=295 Identities=15% Similarity=0.197 Sum_probs=250.4
Q ss_pred CEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe--ehhhhhhccccceE
Q psy14906 175 DIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ--VENQIKKAHRKVVT 252 (583)
Q Consensus 175 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~v~ 252 (583)
-+|++++.|.+|++|...+|.+..+++...+.|+.+...|+++ .|++++. ..||+||+++++ ++.++ .+|...|+
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~-~LAaa~~-qhvRlyD~~S~np~Pv~t~-e~h~kNVt 87 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKK-DLAAAGN-QHVRLYDLNSNNPNPVATF-EGHTKNVT 87 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcc-hhhhccC-CeeEEEEccCCCCCceeEE-eccCCceE
Confidence 4789999999999999999999999999999999999999998 6777764 579999999875 57778 89999999
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccccccee
Q psy14906 253 GAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKN 332 (583)
Q Consensus 253 ~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 332 (583)
++.|..+|+++++|++||+++|||+.. ..+.+. ..|..+|+++..+| +...|+++..+|.|++||+....+...
T Consensus 88 aVgF~~dgrWMyTgseDgt~kIWdlR~----~~~qR~-~~~~spVn~vvlhp-nQteLis~dqsg~irvWDl~~~~c~~~ 161 (311)
T KOG0315|consen 88 AVGFQCDGRWMYTGSEDGTVKIWDLRS----LSCQRN-YQHNSPVNTVVLHP-NQTELISGDQSGNIRVWDLGENSCTHE 161 (311)
T ss_pred EEEEeecCeEEEecCCCceEEEEeccC----cccchh-ccCCCCcceEEecC-CcceEEeecCCCcEEEEEccCCccccc
Confidence 999999999999999999999997753 333333 34679999999998 678999999999999999988766544
Q ss_pred eccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCC
Q psy14906 333 LGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQ 412 (583)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (583)
+-.. ..
T Consensus 162 liPe--------------------------------------------------------------------------~~ 167 (311)
T KOG0315|consen 162 LIPE--------------------------------------------------------------------------DD 167 (311)
T ss_pred cCCC--------------------------------------------------------------------------CC
Confidence 3111 01
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCccccccC-CCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYG-HDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
..+.++...|||+.++.+...|..++|++........+. ...++.|++.+..+.+|||+++||+++.|.+++||+.++.
T Consensus 168 ~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~ 247 (311)
T KOG0315|consen 168 TSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF 247 (311)
T ss_pred cceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc
Confidence 568999999999999999999999999998754433221 1223799999999999999999999999999999999886
Q ss_pred CCCceEEee-ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEec
Q psy14906 492 GKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFS 553 (583)
Q Consensus 492 ~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s 553 (583)
. +....+. +...+..++||.||+||++|+.|+.+++||+..++.++...+|.....|++..
T Consensus 248 ~-kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 248 F-KLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred e-eeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence 2 3333343 44689999999999999999999999999999999999999999888887764
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-42 Score=276.82 Aligned_cols=280 Identities=19% Similarity=0.298 Sum_probs=244.9
Q ss_pred CEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCC
Q psy14906 218 PMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP 297 (583)
Q Consensus 218 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v 297 (583)
-+|++++.|-+||+|...+|.+.+++ ....+.|+.+...|+++.||+++. ..||+||++.. +..++.++.+|...|
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTi-qh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~--np~Pv~t~e~h~kNV 86 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTI-QHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSN--NPNPVATFEGHTKNV 86 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEE-ecCccceeeEEEcCCcchhhhccC-CeeEEEEccCC--CCCceeEEeccCCce
Confidence 38999999999999999999999999 566779999999999999999875 56999977654 566889999999999
Q ss_pred eeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccE
Q psy14906 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNI 377 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (583)
.++.|.. +|+.+++|++||+++|||++...+.+.+...
T Consensus 87 taVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~----------------------------------------- 124 (311)
T KOG0315|consen 87 TAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN----------------------------------------- 124 (311)
T ss_pred EEEEEee-cCeEEEecCCCceEEEEeccCcccchhccCC-----------------------------------------
Confidence 9999995 8999999999999999999986655544222
Q ss_pred EEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCC
Q psy14906 378 AAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPG 457 (583)
Q Consensus 378 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 457 (583)
.+|+++..+|+...|++|..+|.|++||+....+...+. +.
T Consensus 125 -----------------------------------spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~li----Pe 165 (311)
T KOG0315|consen 125 -----------------------------------SPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELI----PE 165 (311)
T ss_pred -----------------------------------CCcceEEecCCcceEEeecCCCcEEEEEccCCccccccC----CC
Confidence 679999999999999999999999999999887777664 35
Q ss_pred cccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCC----CceEEee-ccCCeeeEEeccCCcEEEEEeCCceEEEEEcc
Q psy14906 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK----PPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 458 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 532 (583)
....|.++...|||.+++.+...|+.++|++-.... .++..++ +...+..+.+|||+++||+++.|.+++||+.+
T Consensus 166 ~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~ 245 (311)
T KOG0315|consen 166 DDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTD 245 (311)
T ss_pred CCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecC
Confidence 568899999999999999999999999999876421 1222333 44679999999999999999999999999999
Q ss_pred cc-ceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 533 TC-TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 533 ~~-~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
+. +....+++|..-+.+.+||.||+||+|++.|+.+++|++..++.++.+
T Consensus 246 ~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy 296 (311)
T KOG0315|consen 246 DFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQY 296 (311)
T ss_pred CceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeec
Confidence 88 666789999999999999999999999999999999999999987754
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=300.66 Aligned_cols=534 Identities=15% Similarity=0.169 Sum_probs=367.1
Q ss_pred ecCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eC----eEEEEEcCCeEEEEecc--
Q psy14906 29 SNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DF----FHIYTSANNIIYAWRRG-- 100 (583)
Q Consensus 29 ~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~----~~~~~~~~~~i~vw~~~-- 100 (583)
.+++|....| +...+++++.+..|.+||..+......+.||..+|+|+.+ +. .+++|+.|+.|++|.+.
T Consensus 13 c~R~~~v~sw---~~~~~vafGa~~~Iav~dp~k~~i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~ 89 (764)
T KOG1063|consen 13 CNRVPKVSSW---GPGGLVAFGAGPAIAVADPEKILIVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDE 89 (764)
T ss_pred cccccccccc---cccceEEecCCceEEEeCcccceeEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeeh
Confidence 4688888888 4556789999999999999988888899999999999997 32 58999999999999975
Q ss_pred -ceeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCc--EEEEeeccCC--------------ce-EEec----
Q psy14906 101 -IDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEE--TYLELSFDND--------------TF-KIMG---- 158 (583)
Q Consensus 101 -~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~--------------~~-~~~~---- 158 (583)
-..+..+++|...+.|+...-........|+.+.+||.+..+ +...+.+... .+ ...|
T Consensus 90 ~~~~i~~~~g~~~~~~cv~a~~~~~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~ 169 (764)
T KOG1063|consen 90 YLIKIYTIQGHCKECVCVVARSSVMTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKF 169 (764)
T ss_pred heEEEEeecCcceeEEEEEeeeeEEEeeccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcce
Confidence 246677889999999985554444444789999999995544 2222211111 00 0011
Q ss_pred ------------------ccCCcceEEEeeCCCCC---EEEEEecCCeEEEEEccCCc---------------------e
Q psy14906 159 ------------------KRWNSCVNVLEPSPVVD---IIGVGLSNKKIILHNILTDE---------------------S 196 (583)
Q Consensus 159 ------------------~~~~~~i~~~~~s~~~~---~l~~~~~d~~i~iw~~~~~~---------------------~ 196 (583)
.+|...|.+++|...+. +||++++|..|+||.+.-+. .
T Consensus 170 ~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~ 249 (764)
T KOG1063|consen 170 VVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMI 249 (764)
T ss_pred EEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeee
Confidence 79999999999987544 88999999999999975332 1
Q ss_pred eEE----------EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe-------ehhhhhhccccceEEEEEecC
Q psy14906 197 LME----------FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ-------VENQIKKAHRKVVTGAHFLYN 259 (583)
Q Consensus 197 ~~~----------~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~~~~~~~~v~~~~~~~~ 259 (583)
..+ +.+|.+.|+++.|+|.+. .|++++.|.++.+|...+.. .+..+ .+.........|+|+
T Consensus 250 l~~i~~~is~eall~GHeDWV~sv~W~p~~~-~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~-gg~a~GF~g~lw~~n 327 (764)
T KOG1063|consen 250 LEEIQYRISFEALLMGHEDWVYSVWWHPEGL-DLLSASADKSMIIWKPDENTGIWVDVVRLGEV-GGSAGGFWGGLWSPN 327 (764)
T ss_pred eeeEEEEEehhhhhcCcccceEEEEEccchh-hheecccCcceEEEecCCccceEEEEEEeecc-cccccceeeEEEcCC
Confidence 111 238999999999999997 79999999999999877541 23333 344567889999999
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccc-cceeeccchh
Q psy14906 260 EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET-SNKNLGIASA 338 (583)
Q Consensus 260 ~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~ 338 (583)
++.+++-+.-|..++|. +.............||.+.|..+.|.| .|.+|++.+.|.+-|+|-.-..+ .-.++..+..
T Consensus 328 ~~~ii~~g~~Gg~hlWk-t~d~~~w~~~~~iSGH~~~V~dv~W~p-sGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQi 405 (764)
T KOG1063|consen 328 SNVIIAHGRTGGFHLWK-TKDKTFWTQEPVISGHVDGVKDVDWDP-SGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQI 405 (764)
T ss_pred CCEEEEecccCcEEEEe-ccCccceeeccccccccccceeeeecC-CCCEEEEeccccceeeecccccccceeeeccccc
Confidence 99999999999999996 222234456667889999999999998 79999999999999998655211 1122211110
Q ss_pred ----------hh-hhhhhhcchhccccccCCCccc--------eeeeecc-cccccccEEEEe----------cCCceE-
Q psy14906 339 ----------NR-NNLKRKNRLEKMNEKFILPPVS--------QFSFGLA-REKDWNNIAAIH----------TGKNKV- 387 (583)
Q Consensus 339 ----------~~-~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~----------~~~~~i- 387 (583)
.+ ......+..++....+..|..- ....... ...+...+-+.+ .++|..
T Consensus 406 HGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~ 485 (764)
T KOG1063|consen 406 HGYDLTCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEA 485 (764)
T ss_pred ccccceeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCccccccccccc
Confidence 00 0000111111112222222100 0000000 000000000000 001100
Q ss_pred EE-eecC-ccc-------------ccceeeecccccccCCCCceEEEEccCCcEEEEEecC-----ceEEEEEcccCccc
Q psy14906 388 SL-WSFY-KSK-------------MDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS-----GHVDRFNIQSGAHR 447 (583)
Q Consensus 388 ~~-~~~~-~~~-------------~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~ 447 (583)
.. .+.. ... ......+.....-+|...+.+++.+|+++++|+++.. ..|++|+..+-...
T Consensus 486 ~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~ 565 (764)
T KOG1063|consen 486 AVCAETPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQV 565 (764)
T ss_pred ceeeecccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhh
Confidence 00 0000 000 0011112223344567899999999999999998754 46999999988888
Q ss_pred cccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceE---EeeccCCeeeEEeccCCcEEEEEeCCc
Q psy14906 448 GSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLR---SIKLDNGISFFRTHQESSMLAVCLDDF 524 (583)
Q Consensus 448 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~dg 524 (583)
..+ .+|+-.|+.++||||+++|++.+.|.++.+|........... .-.|..-|.++.|+|++.++|+++.|.
T Consensus 566 ~~L-----~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK 640 (764)
T KOG1063|consen 566 QEL-----EGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDK 640 (764)
T ss_pred hee-----cccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCc
Confidence 777 799999999999999999999999999999998654211111 223445689999999999999999999
Q ss_pred eEEEEEcccc--ceEEe--ecccccceeeEEecC-----CCcEEEEEeCCCeEEEEeCC
Q psy14906 525 TVNIIDIDTC--TIIRK--LSGHMGQLTDADFSP-----DSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 525 ~i~i~d~~~~--~~~~~--~~~h~~~v~~l~~s~-----d~~~l~s~~~d~~i~vw~~~ 574 (583)
+|++|..... +.+.. ...+...|++++|.| .+..++.|-+.|.|.+|...
T Consensus 641 ~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 641 KVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred eEEEEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence 9999998877 44332 334788999999987 22367888899999999965
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-42 Score=298.49 Aligned_cols=338 Identities=19% Similarity=0.259 Sum_probs=283.4
Q ss_pred eeeeecccCccEEEE--ccCCC-EEEEEeCCCcEEEEEcCC--CcEEEEeeccCCc-eEEecccCCcceEEEeeCCCCCE
Q psy14906 103 IVGTYKGHTSPVHLI--LPFGP-HLISVDEESNVKVWDIKA--EETYLELSFDNDT-FKIMGKRWNSCVNVLEPSPVVDI 176 (583)
Q Consensus 103 ~~~~~~~h~~~v~~i--s~~~~-~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~s~~~~~ 176 (583)
..+.++ |+.+|.+- .|-.. .|++++.|-..++|++.. ......+.+.... ...........|++++|+.+|..
T Consensus 171 ~~kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~ 249 (524)
T KOG0273|consen 171 KAKVLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTL 249 (524)
T ss_pred ceeecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCe
Confidence 344555 99999876 66655 889999999999999975 1111111110000 00000134578999999999999
Q ss_pred EEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEE
Q psy14906 177 IGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF 256 (583)
Q Consensus 177 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~ 256 (583)
||+|+.||.+++|+. .|..+.++..|+++|.++.|+..|. ++++++.|+++.+||..+++..+.+ .-|..+-..+.|
T Consensus 250 LatG~~~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~-yilS~~vD~ttilwd~~~g~~~q~f-~~~s~~~lDVdW 326 (524)
T KOG0273|consen 250 LATGSEDGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGT-YILSGGVDGTTILWDAHTGTVKQQF-EFHSAPALDVDW 326 (524)
T ss_pred EEEeecCcEEEEEec-CchhhhhhhccCCceEEEEEcCCCC-EEEeccCCccEEEEeccCceEEEee-eeccCCccceEE
Confidence 999999999999997 4899999999999999999999999 8999999999999999999988888 678888778889
Q ss_pred ecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccc
Q psy14906 257 LYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIA 336 (583)
Q Consensus 257 ~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 336 (583)
-.+ ..|++++.|+.|+++.++ ..++..++.+|.++|.++.|.| .+.+|++++.|+++++|..........+
T Consensus 327 ~~~-~~F~ts~td~~i~V~kv~----~~~P~~t~~GH~g~V~alk~n~-tg~LLaS~SdD~TlkiWs~~~~~~~~~l--- 397 (524)
T KOG0273|consen 327 QSN-DEFATSSTDGCIHVCKVG----EDRPVKTFIGHHGEVNALKWNP-TGSLLASCSDDGTLKIWSMGQSNSVHDL--- 397 (524)
T ss_pred ecC-ceEeecCCCceEEEEEec----CCCcceeeecccCceEEEEECC-CCceEEEecCCCeeEeeecCCCcchhhh---
Confidence 754 468999999999999886 5677888999999999999997 7999999999999999998766554333
Q ss_pred hhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCce
Q psy14906 337 SANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT 416 (583)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 416 (583)
..|...|.
T Consensus 398 ------------------------------------------------------------------------~~Hskei~ 405 (524)
T KOG0273|consen 398 ------------------------------------------------------------------------QAHSKEIY 405 (524)
T ss_pred ------------------------------------------------------------------------hhhcccee
Confidence 11224566
Q ss_pred EEEEccCC---------cEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE
Q psy14906 417 CVYITHCG---------NFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487 (583)
Q Consensus 417 ~~~~s~~~---------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 487 (583)
.+.|+|.| ..+++++.|+.|++||+..+.++..+ ..|..+|++++|+|+|+++|+|+.||.|.+|+
T Consensus 406 t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f-----~kH~~pVysvafS~~g~ylAsGs~dg~V~iws 480 (524)
T KOG0273|consen 406 TIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTL-----MKHQEPVYSVAFSPNGRYLASGSLDGCVHIWS 480 (524)
T ss_pred eEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEee-----ccCCCceEEEEecCCCcEEEecCCCCeeEecc
Confidence 77777753 47899999999999999999999999 79999999999999999999999999999999
Q ss_pred ccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEcc
Q psy14906 488 FKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 488 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 532 (583)
++++ ++.+.....+.|..++|+.+|.+|.++..|+.+.+.|+.
T Consensus 481 ~~~~--~l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 481 TKTG--KLVKSYQGTGGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred ccch--heeEeecCCCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 9999 999999999999999999999999999999999999874
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-41 Score=294.52 Aligned_cols=323 Identities=17% Similarity=0.289 Sum_probs=283.7
Q ss_pred cCCcceEEEeeCCCCC-EEEEEecCCeEEEEEccCC----ceeEEEe----------ccCCCeEEEEEecCCCCEEEEEc
Q psy14906 160 RWNSCVNVLEPSPVVD-IIGVGLSNKKIILHNILTD----ESLMEFI----------QTWGPVTALSFRTDGPPMMVSGS 224 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~----~~~~~~~----------~~~~~v~~~~~~~~~~~~l~s~~ 224 (583)
.|..+|.+.+|+|-.. .+++|+.+-..++|++... .....++ .....|++++|+.+|. +|++|+
T Consensus 176 ~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~-~LatG~ 254 (524)
T KOG0273|consen 176 RHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGT-LLATGS 254 (524)
T ss_pred cCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCC-eEEEee
Confidence 5899999999999777 9999999999999998741 1111111 1236799999999999 999999
Q ss_pred CCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEee
Q psy14906 225 NTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304 (583)
Q Consensus 225 ~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 304 (583)
.||.+++|+.. |.++.++ ..|.++|.++.|+.+|++|++++.|+++.+||.. .+.....+.-|..+-..+.|-
T Consensus 255 ~~G~~riw~~~-G~l~~tl-~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~----~g~~~q~f~~~s~~~lDVdW~- 327 (524)
T KOG0273|consen 255 EDGEARIWNKD-GNLISTL-GQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAH----TGTVKQQFEFHSAPALDVDWQ- 327 (524)
T ss_pred cCcEEEEEecC-chhhhhh-hccCCceEEEEEcCCCCEEEeccCCccEEEEecc----CceEEEeeeeccCCccceEEe-
Confidence 99999999976 7888888 7899999999999999999999999999999654 466677777788887889997
Q ss_pred CCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCC
Q psy14906 305 NSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGK 384 (583)
Q Consensus 305 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (583)
+...+++++.|+.|+++.+....+...+
T Consensus 328 -~~~~F~ts~td~~i~V~kv~~~~P~~t~--------------------------------------------------- 355 (524)
T KOG0273|consen 328 -SNDEFATSSTDGCIHVCKVGEDRPVKTF--------------------------------------------------- 355 (524)
T ss_pred -cCceEeecCCCceEEEEEecCCCcceee---------------------------------------------------
Confidence 5778999999999999998776655443
Q ss_pred ceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeE
Q psy14906 385 NKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRG 464 (583)
Q Consensus 385 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~ 464 (583)
..|.+.|.++.|+|.|.+|++++.|++++||+.........+ .+|...|..
T Consensus 356 ------------------------~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l-----~~Hskei~t 406 (524)
T KOG0273|consen 356 ------------------------IGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDL-----QAHSKEIYT 406 (524)
T ss_pred ------------------------ecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhh-----hhhccceee
Confidence 124478999999999999999999999999999988888888 899999999
Q ss_pred EEEeCCC---------cEEEEeecCCcEEEEEccCCCCCceEEe-eccCCeeeEEeccCCcEEEEEeCCceEEEEEcccc
Q psy14906 465 VVSDNLN---------QIVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTC 534 (583)
Q Consensus 465 ~~~s~~~---------~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 534 (583)
+.|+|+| ..+++++.|++|++||+..+ .++..+ +|..+|.+++|+|+|+++|+|+.||.|.+|+.+++
T Consensus 407 ~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~g--v~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~ 484 (524)
T KOG0273|consen 407 IKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESG--VPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTG 484 (524)
T ss_pred EeecCCCCccCCCcCCceEEEeecCCeEEEEEccCC--ceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccch
Confidence 9999975 37999999999999999999 888887 78899999999999999999999999999999999
Q ss_pred ceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 535 TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 535 ~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
+..+.+.+ .+.|..|+|+.+|.+|..+-.|+.+++-|++
T Consensus 485 ~l~~s~~~-~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 485 KLVKSYQG-TGGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred heeEeecC-CCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 99999885 5669999999999999999999999998875
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-40 Score=300.05 Aligned_cols=516 Identities=15% Similarity=0.173 Sum_probs=368.6
Q ss_pred eeeeeeeecCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eCeEEEEEcCC---eEEE
Q psy14906 22 HRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DFFHIYTSANN---IIYA 96 (583)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~---~i~v 96 (583)
.+++|+ .-.....++..|- .-+++|..+..|.+||++.-++.+.+..|..+++|+|| +|++++++.-| .++|
T Consensus 30 ~kVlGl-Tv~~~~gLa~~p~--Sgl~aYpAGCvVVlfn~~~~tQ~hlvnssRk~~t~vAfS~~GryvatGEcG~~pa~kV 106 (1080)
T KOG1408|consen 30 QKVLGL-TVKNANGLASVPC--SGLCAYPAGCVVVLFNVDSCTQSHLVNSSRKPLTCVAFSQNGRYVATGECGRTPASKV 106 (1080)
T ss_pred Hhhhce-EeecCCccccccc--ccceeeccCcEEEEEcccccchhheecccCcceeEEEEcCCCcEEEecccCCCcccee
Confidence 378884 4333345555433 44688889999999999998888888889999999999 78999887644 8999
Q ss_pred Eecc-ceeeeeecccCccEEEE--ccCCCEEEEEeC--CCcEEEEEcCCCc---------EEEEeeccCCc--eEEec--
Q psy14906 97 WRRG-IDIVGTYKGHTSPVHLI--LPFGPHLISVDE--ESNVKVWDIKAEE---------TYLELSFDNDT--FKIMG-- 158 (583)
Q Consensus 97 w~~~-~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~--dg~i~iwd~~~~~---------~~~~~~~~~~~--~~~~~-- 158 (583)
|++. ...+..|..|...|+|+ +|.++|+++.+. |-.|.+||++..- .+..+.|..+. +.-.|
T Consensus 107 w~la~h~vVAEfvdHKY~vtcvaFsp~~kyvvSVGsQHDMIVnv~dWr~N~~~asnkiss~Vsav~fsEdgSYfvT~gnr 186 (1080)
T KOG1408|consen 107 WSLAFHGVVAEFVDHKYNVTCVAFSPGNKYVVSVGSQHDMIVNVNDWRVNSSGASNKISSVVSAVAFSEDGSYFVTSGNR 186 (1080)
T ss_pred eeeccccchhhhhhccccceeeeecCCCcEEEeeccccceEEEhhhhhhcccccccccceeEEEEEEccCCceeeeeeee
Confidence 9974 46788999999999997 999999998765 4467788775421 12222222211 11111
Q ss_pred ----------------------------------------cc------------------------------CCcceEEE
Q psy14906 159 ----------------------------------------KR------------------------------WNSCVNVL 168 (583)
Q Consensus 159 ----------------------------------------~~------------------------------~~~~i~~~ 168 (583)
.+ -.....|+
T Consensus 187 Hvk~wyl~~~~KykdpiPl~gRs~~lg~lr~n~f~avaCg~gicAestfait~qGhLvEFSsRRLLDKWVqcRTTnAnCI 266 (1080)
T KOG1408|consen 187 HVKLWYLQIQSKYKDPIPLPGRSYFLGNLRFNEFLAVACGVGICAESTFAITAQGHLVEFSSRRLLDKWVQCRTTNANCI 266 (1080)
T ss_pred eEEEEEeeccccccCCccccchhhhccccccchhhhhhhcCcccccceEEEecccceeeechhhhhhhhhhhhcccccee
Confidence 00 01111222
Q ss_pred eeCCCCCEEEEEecCCeEEEEEccCCceeEEEec-c-----------------------CCCeEEEEEecCCCCEEEEEc
Q psy14906 169 EPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQ-T-----------------------WGPVTALSFRTDGPPMMVSGS 224 (583)
Q Consensus 169 ~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~-----------------------~~~v~~~~~~~~~~~~l~s~~ 224 (583)
+. ..+++++|+.+|.|++++..+.+.+.++.. | --...++.|.+... .|.+..
T Consensus 267 cV--s~r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~-klscVY 343 (1080)
T KOG1408|consen 267 CV--SSRLIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTD-KLSCVY 343 (1080)
T ss_pred ee--ecceEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCc-eEEEEE
Confidence 22 367888899999999998877554444320 0 01234678888777 788888
Q ss_pred CCCcEEEEeCCCCeehhh---hhhccccceEEEEEecC-----------CCEEEEEeCCCeEEEEEccCCCCCceeeE--
Q psy14906 225 NTGHLTVWNLEDRQVENQ---IKKAHRKVVTGAHFLYN-----------EPLLVTSSPDNTLKLWIFDKADGNGRLLR-- 288 (583)
Q Consensus 225 ~dg~i~vwd~~~~~~~~~---~~~~~~~~v~~~~~~~~-----------~~~l~s~~~d~~i~~w~~~~~~~~~~~~~-- 288 (583)
.|..++|||+++-+.+.. + ..|...|+.+.--|- ...|++++.|++|++|+++.-... ..++
T Consensus 344 ndhSlYvWDvrD~~kvgk~~s~-lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn-~vyrRN 421 (1080)
T KOG1408|consen 344 NDHSLYVWDVRDVNKVGKCSSM-LYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNN-QVYRRN 421 (1080)
T ss_pred cCceEEEEeccccccccceeee-eeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeeccccccc-ceeecc
Confidence 899999999987543322 2 358888887776551 125899999999999988642111 1100
Q ss_pred --------------------------------EeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccc
Q psy14906 289 --------------------------------IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIA 336 (583)
Q Consensus 289 --------------------------------~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 336 (583)
..-+....+.+++.+| ++++|++|..-|++++|++..-+....+.
T Consensus 422 ils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp-~gqhLAsGDr~GnlrVy~Lq~l~~~~~~e-- 498 (1080)
T KOG1408|consen 422 ILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSP-DGQHLASGDRGGNLRVYDLQELEYTCFME-- 498 (1080)
T ss_pred cchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECC-CcceecccCccCceEEEEehhhhhhhhee--
Confidence 0011234689999998 89999999999999999998765433321
Q ss_pred hhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCce
Q psy14906 337 SANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT 416 (583)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 416 (583)
.+-..+.++.++ .......+++.++.+..|.++|....- ........|...|+
T Consensus 499 -------------------AHesEilcLeyS--~p~~~~kLLASasrdRlIHV~Dv~rny------~l~qtld~HSssIT 551 (1080)
T KOG1408|consen 499 -------------------AHESEILCLEYS--FPVLTNKLLASASRDRLIHVYDVKRNY------DLVQTLDGHSSSIT 551 (1080)
T ss_pred -------------------cccceeEEEeec--CchhhhHhhhhccCCceEEEEeccccc------chhhhhccccccee
Confidence 111222222222 222335788899999999999987643 23334455668999
Q ss_pred EEEEccCC--cEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCC
Q psy14906 417 CVYITHCG--NFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP 494 (583)
Q Consensus 417 ~~~~s~~~--~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 494 (583)
++.|...| ..+++++.|..|.+--.+....-..+......-....++.++..|..+++++++.|..|+||+++++ +
T Consensus 552 svKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sg--K 629 (1080)
T KOG1408|consen 552 SVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESG--K 629 (1080)
T ss_pred EEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEecccc--c
Confidence 99998887 7788888888766544332222222211000122457889999999999999999999999999999 8
Q ss_pred ceEEeecc----CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEE
Q psy14906 495 PLRSIKLD----NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRV 570 (583)
Q Consensus 495 ~~~~~~~~----~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~v 570 (583)
..+.++.. +....+...|.|.|+|+.+.|.++.++|..+|+++.+..||...|+.+.|++|-+.|++.+.||.|.|
T Consensus 630 q~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFv 709 (1080)
T KOG1408|consen 630 QVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFV 709 (1080)
T ss_pred eeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEE
Confidence 88887643 56788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCcc
Q psy14906 571 WDIPSSQ 577 (583)
Q Consensus 571 w~~~~~~ 577 (583)
|.+..-.
T Consensus 710 W~lp~~m 716 (1080)
T KOG1408|consen 710 WKLPLTM 716 (1080)
T ss_pred EECchhH
Confidence 9997643
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=289.77 Aligned_cols=463 Identities=12% Similarity=0.163 Sum_probs=340.8
Q ss_pred ecCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe---eCeEEEEEcCCeEEEEecc-ceee
Q psy14906 29 SNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS---DFFHIYTSANNIIYAWRRG-IDIV 104 (583)
Q Consensus 29 ~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~---~~~~~~~~~~~~i~vw~~~-~~~~ 104 (583)
.++-..++.+||..+= +++.--.|.|.|||.++...++.+.-.+.+|.+..| -..+++|+.|..|+||+.+ .+.+
T Consensus 12 rSdRVKsVd~HPtePw-~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt~ekV 90 (794)
T KOG0276|consen 12 RSDRVKSVDFHPTEPW-ILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNTGEKV 90 (794)
T ss_pred cCCceeeeecCCCCce-EEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecccceee
Confidence 3556688999998665 444558999999999999999999988999998887 3468888999999999974 6889
Q ss_pred eeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCC-cEEEEeeccCCceEEecccCCcceEEEeeCC-CCCEEEEE
Q psy14906 105 GTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAE-ETYLELSFDNDTFKIMGKRWNSCVNVLEPSP-VVDIIGVG 180 (583)
Q Consensus 105 ~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~ 180 (583)
+.|++|.+.|.++ +|...+++++++|-+|++||++.+ .+.++++ +|...|.+++|+| |.+.+|++
T Consensus 91 ~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfe-----------GH~HyVMqv~fnPkD~ntFaS~ 159 (794)
T KOG0276|consen 91 KTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFE-----------GHEHYVMQVAFNPKDPNTFASA 159 (794)
T ss_pred EEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEc-----------CcceEEEEEEecCCCccceeee
Confidence 9999999999998 999999999999999999999985 4556666 9999999999999 67799999
Q ss_pred ecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCC-CCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecC
Q psy14906 181 LSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDG-PPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN 259 (583)
Q Consensus 181 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 259 (583)
+-|++|++|.+....+..++.+|...|+|+.|-+-| +.+|++|+.|.+++|||.++..+++++ .||...|..+.|+|.
T Consensus 160 sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TL-eGHt~Nvs~v~fhp~ 238 (794)
T KOG0276|consen 160 SLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTL-EGHTNNVSFVFFHPE 238 (794)
T ss_pred eccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHh-hcccccceEEEecCC
Confidence 999999999999999999999999999999998754 238999999999999999999999999 899999999999999
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhh
Q psy14906 260 EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAN 339 (583)
Q Consensus 260 ~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 339 (583)
-..+++|++||+++||+- . +.+...++.-.-..+.+++..+ .+..++.|..+|.+. ..+....+.-.+....
T Consensus 239 lpiiisgsEDGTvriWhs--~--Ty~lE~tLn~gleRvW~I~~~k-~~~~i~vG~Deg~i~-v~lgreeP~vsMd~~g-- 310 (794)
T KOG0276|consen 239 LPIIISGSEDGTVRIWNS--K--TYKLEKTLNYGLERVWCIAAHK-GDGKIAVGFDEGSVT-VKLGREEPAVSMDSNG-- 310 (794)
T ss_pred CcEEEEecCCccEEEecC--c--ceehhhhhhcCCceEEEEeecC-CCCeEEEeccCCcEE-EEccCCCCceeecCCc--
Confidence 999999999999999943 3 4555566666677899999886 566677777766654 4444433322221100
Q ss_pred hhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCc---c---cccceeeecccccccCCC
Q psy14906 340 RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYK---S---KMDDMFLVPERCKQAKQS 413 (583)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~---~~~~~~~~~~~~~~~~~~ 413 (583)
.++-+. .+.+.--++.. . ..++.............-
T Consensus 311 ------------------------------------KIiwa~--~~ei~~~~~ks~~~~~ev~DgErL~LsvKeLgs~ei 352 (794)
T KOG0276|consen 311 ------------------------------------KIIWAV--HSEIQAVNLKSVGAQKEVTDGERLPLSVKELGSVEI 352 (794)
T ss_pred ------------------------------------cEEEEc--CceeeeeeceeccCcccccCCccccchhhhcccccc
Confidence 000000 00000000000 0 000000001111111124
Q ss_pred CceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCC
Q psy14906 414 KPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK 493 (583)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 493 (583)
....++-+|+|+++++++ ||.-.||..-.-+ ..+.+.-....|++|.+..+.-..++.|+++ ++.
T Consensus 353 yPq~L~hsPNGrfV~Vcg-dGEyiIyTala~R----------nK~fG~~~eFvw~~dsne~avRes~~~vki~--knf-- 417 (794)
T KOG0276|consen 353 YPQTLAHSPNGRFVVVCG-DGEYIIYTALALR----------NKAFGSGLEFVWAADSNEFAVRESNGNVKIF--KNF-- 417 (794)
T ss_pred chHHhccCCCCcEEEEec-CccEEEEEeeehh----------hcccccceeEEEcCCCCeEEEEecCCceEEE--ecc--
Confidence 456788899999988875 6777777632111 3456677889999998888888888899998 444
Q ss_pred CceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 494 PPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 494 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
+..+.+..... ...--.|.+|.+. .++.+++||.+++++++++.-. ...+.|+.+|.+++.++.|. .++..+
T Consensus 418 ke~ksi~~~~~---~e~i~gg~Llg~~-ss~~~~fydW~~~~lVrrI~v~---~k~v~w~d~g~lVai~~d~S-fyil~~ 489 (794)
T KOG0276|consen 418 KEHKSIRPDMS---AEGIFGGPLLGVR-SSDFLCFYDWESGELVRRIEVT---SKHVYWSDNGELVAIAGDDS-FYILKF 489 (794)
T ss_pred eeccccccccc---eeeecCCceEEEE-eCCeEEEEEcccceEEEEEeec---cceeEEecCCCEEEEEecCc-eeEEEe
Confidence 44444443322 1111234455554 4557999999999999888743 45678999998888777554 445444
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-40 Score=275.45 Aligned_cols=339 Identities=15% Similarity=0.191 Sum_probs=285.2
Q ss_pred eeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEE
Q psy14906 103 IVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG 180 (583)
Q Consensus 103 ~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 180 (583)
.+.+|..|+++|.++ +|+.+++++|+.|..-.+|++.+|+....+. +|+..|+++.||.||.+||+|
T Consensus 56 S~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~elt-----------gHKDSVt~~~FshdgtlLATG 124 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELT-----------GHKDSVTCCSFSHDGTLLATG 124 (399)
T ss_pred ceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEec-----------CCCCceEEEEEccCceEEEec
Confidence 467899999999998 8999999999999999999999999988888 999999999999999999999
Q ss_pred ecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCC
Q psy14906 181 LSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNE 260 (583)
Q Consensus 181 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 260 (583)
.-+|.|+||...++.....+......+.-+.|+|.+. +|+.|+.||.+.+|.+.++...+.+ .+|..++++=.|.|+|
T Consensus 125 dmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~-illAG~~DGsvWmw~ip~~~~~kv~-~Gh~~~ct~G~f~pdG 202 (399)
T KOG0296|consen 125 DMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAH-ILLAGSTDGSVWMWQIPSQALCKVM-SGHNSPCTCGEFIPDG 202 (399)
T ss_pred CCCccEEEEEcccCceEEEeecccCceEEEEeccccc-EEEeecCCCcEEEEECCCcceeeEe-cCCCCCcccccccCCC
Confidence 9999999999999999999887778899999999988 9999999999999999998777777 8999999999999999
Q ss_pred CEEEEEeCCCeEEEEEccCCCCCceeeEEecc-CCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhh
Q psy14906 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREG-HSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAN 339 (583)
Q Consensus 261 ~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 339 (583)
+.++++..||+|++|+.. .+.++..+.+ ...+..++.++. .+..++.|..++.+++-+..+++.+.......
T Consensus 203 Kr~~tgy~dgti~~Wn~k----tg~p~~~~~~~e~~~~~~~~~~~-~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~-- 275 (399)
T KOG0296|consen 203 KRILTGYDDGTIIVWNPK----TGQPLHKITQAEGLELPCISLNL-AGSTLTKGNSEGVACGVNNGSGKVVNCNNGTV-- 275 (399)
T ss_pred ceEEEEecCceEEEEecC----CCceeEEecccccCcCCcccccc-ccceeEeccCCccEEEEccccceEEEecCCCC--
Confidence 999999999999999554 3455555442 234566778874 78899999999999998887776543321100
Q ss_pred hhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEE
Q psy14906 340 RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVY 419 (583)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 419 (583)
.......+ .....+.++.
T Consensus 276 ----------------------------------------------------------~~l~~~~e----~~~esve~~~ 293 (399)
T KOG0296|consen 276 ----------------------------------------------------------PELKPSQE----ELDESVESIP 293 (399)
T ss_pred ----------------------------------------------------------ccccccch----hhhhhhhhcc
Confidence 00000000 0002344555
Q ss_pred EccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEe
Q psy14906 420 ITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI 499 (583)
Q Consensus 420 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 499 (583)
++..=.+.|+|+-||+|.|||+...++...+ .|...|+.+.|.+ ..+|++++.||.|+.||.+++ +++..+
T Consensus 294 ~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c------~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG--~l~~~y 364 (399)
T KOG0296|consen 294 SSSKLPLAACGSVDGTIAIYDLAASTLRHIC------EHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTG--QLKFTY 364 (399)
T ss_pred cccccchhhcccccceEEEEecccchhheec------cCCCceEEEEEcC-cchheeeccCceEEeeecccc--ceEEEE
Confidence 5666678999999999999999988887776 7889999999998 789999999999999999999 888877
Q ss_pred ecc-CCeeeEEeccCCcEEEEEeCCceEEEEEcc
Q psy14906 500 KLD-NGISFFRTHQESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 500 ~~~-~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 532 (583)
..+ .+|.+++++|+.+++++++.|++.+||++.
T Consensus 365 ~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 365 TGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred ecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 655 699999999999999999999999999864
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-41 Score=281.16 Aligned_cols=291 Identities=21% Similarity=0.318 Sum_probs=266.0
Q ss_pred ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEE
Q psy14906 195 ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKL 274 (583)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~ 274 (583)
.+...+.+|..+|+.+-|+|+-. ++++++.|++|++||..++++...+ ++|.+.+.+++|+..|++|++++.|-.+++
T Consensus 99 ~l~~~l~g~r~~vt~v~~hp~~~-~v~~as~d~tikv~D~~tg~~e~~L-rGHt~sv~di~~~a~Gk~l~tcSsDl~~~L 176 (406)
T KOG0295|consen 99 NLVQKLAGHRSSVTRVIFHPSEA-LVVSASEDATIKVFDTETGELERSL-RGHTDSVFDISFDASGKYLATCSSDLSAKL 176 (406)
T ss_pred CchhhhhccccceeeeeeccCce-EEEEecCCceEEEEEccchhhhhhh-hccccceeEEEEecCccEEEecCCccchhh
Confidence 45566778999999999999988 8999999999999999999999999 899999999999999999999999999999
Q ss_pred EEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcccc
Q psy14906 275 WIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNE 354 (583)
Q Consensus 275 w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (583)
||++. ..++++.+.+|...|.++.|.| .|.++++++.|.+|+.|++.++.++..+...
T Consensus 177 Wd~~~---~~~c~ks~~gh~h~vS~V~f~P-~gd~ilS~srD~tik~We~~tg~cv~t~~~h------------------ 234 (406)
T KOG0295|consen 177 WDFDT---FFRCIKSLIGHEHGVSSVFFLP-LGDHILSCSRDNTIKAWECDTGYCVKTFPGH------------------ 234 (406)
T ss_pred eeHHH---HHHHHHHhcCcccceeeEEEEe-cCCeeeecccccceeEEecccceeEEeccCc------------------
Confidence 98764 3677888999999999999998 6899999999999999999999887766321
Q ss_pred ccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCc
Q psy14906 355 KFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434 (583)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 434 (583)
...+..+..+.||..+++++.|.
T Consensus 235 ---------------------------------------------------------~ewvr~v~v~~DGti~As~s~dq 257 (406)
T KOG0295|consen 235 ---------------------------------------------------------SEWVRMVRVNQDGTIIASCSNDQ 257 (406)
T ss_pred ---------------------------------------------------------hHhEEEEEecCCeeEEEecCCCc
Confidence 14588899999999999999999
Q ss_pred eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCC---------------CcEEEEeecCCcEEEEEccCCCCCceEEe
Q psy14906 435 HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNL---------------NQIVISGGNDQTVKVWHFKQTGKPPLRSI 499 (583)
Q Consensus 435 ~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~---------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 499 (583)
++++|-+.++++...+ ..|+.+|.+++|.|. ++++.+++.|++|++||+.++ .++.++
T Consensus 258 tl~vW~~~t~~~k~~l-----R~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg--~cL~tL 330 (406)
T KOG0295|consen 258 TLRVWVVATKQCKAEL-----REHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTG--MCLFTL 330 (406)
T ss_pred eEEEEEeccchhhhhh-----hccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCC--eEEEEE
Confidence 9999999999888888 899999999999774 258999999999999999999 888777
Q ss_pred ec-cCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 500 KL-DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 500 ~~-~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
.. .+.|..++|+|.|+||+++.+|+++++||++++++...+..|..-+++++|..+..+++||+-|.++++|.-
T Consensus 331 ~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 331 VGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred ecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 54 578999999999999999999999999999999999999999999999999999999999999999999963
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=290.95 Aligned_cols=436 Identities=16% Similarity=0.184 Sum_probs=322.9
Q ss_pred eecCCCCCCeEEEEeeC---eEEEEEcCCeEEEEecc-ceeeeeecccCccEEE--EccCCCEEEEEeCCCcEEEEEcCC
Q psy14906 67 SVSPQHEDDITCLSSDF---FHIYTSANNIIYAWRRG-IDIVGTYKGHTSPVHL--ILPFGPHLISVDEESNVKVWDIKA 140 (583)
Q Consensus 67 ~~~~~h~~~v~~~~~~~---~~~~~~~~~~i~vw~~~-~~~~~~~~~h~~~v~~--is~~~~~l~s~~~dg~i~iwd~~~ 140 (583)
+.+..+.++|.|+.++| .++++-.+|.|.||+.+ +..++.++-.+.||.+ +-+-.+++++|++|..|+|++..+
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt 86 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNT 86 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEeccc
Confidence 34555899999999865 67888899999999975 5678889988888886 477888999999999999999999
Q ss_pred CcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCC-ceeEEEeccCCCeEEEEEecCCCCE
Q psy14906 141 EETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD-ESLMEFIQTWGPVTALSFRTDGPPM 219 (583)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~ 219 (583)
++.+..++ .|...|++++.+|...++++++.|-+|++||.+.. .+.++|.+|+.-|.+++|+|.....
T Consensus 87 ~ekV~~Fe-----------AH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~nt 155 (794)
T KOG0276|consen 87 GEKVKTFE-----------AHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNT 155 (794)
T ss_pred ceeeEEee-----------ccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccc
Confidence 99999999 99999999999999999999999999999999754 6788899999999999999988889
Q ss_pred EEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCC--CEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCC
Q psy14906 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNE--PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP 297 (583)
Q Consensus 220 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v 297 (583)
+++++-|++|+||.+.+..+..++ .+|...|+++.|-+.| .+|++|+.|.++++||+. +..+++++.||...|
T Consensus 156 FaS~sLDrTVKVWslgs~~~nfTl-~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQ----tk~CV~TLeGHt~Nv 230 (794)
T KOG0276|consen 156 FASASLDRTVKVWSLGSPHPNFTL-EGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQ----TKSCVQTLEGHTNNV 230 (794)
T ss_pred eeeeeccccEEEEEcCCCCCceee-eccccCcceEEeccCCCcceEEecCCCceEEEeecc----hHHHHHHhhcccccc
Confidence 999999999999999999999999 7999999999998754 699999999999999876 678999999999999
Q ss_pred eeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccE
Q psy14906 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNI 377 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (583)
..+.|+| .-..+++|+.||++++|+..+-+....+... +..+.++... ..++.
T Consensus 231 s~v~fhp-~lpiiisgsEDGTvriWhs~Ty~lE~tLn~g---------------------leRvW~I~~~-----k~~~~ 283 (794)
T KOG0276|consen 231 SFVFFHP-ELPIIISGSEDGTVRIWNSKTYKLEKTLNYG---------------------LERVWCIAAH-----KGDGK 283 (794)
T ss_pred eEEEecC-CCcEEEEecCCccEEEecCcceehhhhhhcC---------------------CceEEEEeec-----CCCCe
Confidence 9999998 6789999999999999998887765544221 1111111110 01223
Q ss_pred EEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEE---------cccCcccc
Q psy14906 378 AAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFN---------IQSGAHRG 448 (583)
Q Consensus 378 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d---------~~~~~~~~ 448 (583)
++.+.+.+.+.+--- .....+.+++.|+.+-+...+ |.--+ +..|+.+.
T Consensus 284 i~vG~Deg~i~v~lg--------------------reeP~vsMd~~gKIiwa~~~e--i~~~~~ks~~~~~ev~DgErL~ 341 (794)
T KOG0276|consen 284 IAVGFDEGSVTVKLG--------------------REEPAVSMDSNGKIIWAVHSE--IQAVNLKSVGAQKEVTDGERLP 341 (794)
T ss_pred EEEeccCCcEEEEcc--------------------CCCCceeecCCccEEEEcCce--eeeeeceeccCcccccCCcccc
Confidence 444444444322110 234456677777666554322 22222 22222221
Q ss_pred ccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEE
Q psy14906 449 SYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNI 528 (583)
Q Consensus 449 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 528 (583)
.- ...+..-.-....++-+|+|++++.|+ ||.-.||..-. ...+.-+.-....|++|....|+-..++.|++
T Consensus 342 Ls-vKeLgs~eiyPq~L~hsPNGrfV~Vcg-dGEyiIyTala------~RnK~fG~~~eFvw~~dsne~avRes~~~vki 413 (794)
T KOG0276|consen 342 LS-VKELGSVEIYPQTLAHSPNGRFVVVCG-DGEYIIYTALA------LRNKAFGSGLEFVWAADSNEFAVRESNGNVKI 413 (794)
T ss_pred ch-hhhccccccchHHhccCCCCcEEEEec-CccEEEEEeee------hhhcccccceeEEEcCCCCeEEEEecCCceEE
Confidence 11 000011111234577889999777665 78888875321 22233456677899999888899888899999
Q ss_pred EEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 529 IDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 529 ~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
+ ++.+....+...- + ...--.|.+|... .++.+++||-+++++++.+
T Consensus 414 ~--knfke~ksi~~~~--~--~e~i~gg~Llg~~-ss~~~~fydW~~~~lVrrI 460 (794)
T KOG0276|consen 414 F--KNFKEHKSIRPDM--S--AEGIFGGPLLGVR-SSDFLCFYDWESGELVRRI 460 (794)
T ss_pred E--ecceecccccccc--c--eeeecCCceEEEE-eCCeEEEEEcccceEEEEE
Confidence 9 6666655554211 1 1221234445444 5667999999999998875
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-38 Score=294.54 Aligned_cols=483 Identities=16% Similarity=0.184 Sum_probs=374.1
Q ss_pred ceEEEEeeCCeEEEEecCCc-----EEEeecCCCCCCeEEEEe----eCeEEEEEcCCeEEEEec-cceeeeeecccCcc
Q psy14906 44 ETLFVTCVGKAFHVYGCNHF-----KLLSVSPQHEDDITCLSS----DFFHIYTSANNIIYAWRR-GIDIVGTYKGHTSP 113 (583)
Q Consensus 44 ~~~i~~~~~~~i~v~d~~~~-----~~~~~~~~h~~~v~~~~~----~~~~~~~~~~~~i~vw~~-~~~~~~~~~~h~~~ 113 (583)
+.+++...++.+.||+...+ ..+..++...+.|+++.- =++++.|+.+|.+++|++ .++.+.+++++...
T Consensus 125 e~lia~d~~~~l~vw~~s~~~~e~~l~~~~~~~~~~~Ital~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v~~f~~~~s~ 204 (910)
T KOG1539|consen 125 EHLIAVDISNILFVWKTSSIQEELYLQSTFLKVEGDFITALLHPSTYLNKIVVGSSQGRLQLWNVRTGKVVYTFQEFFSR 204 (910)
T ss_pred ceEEEEEccCcEEEEEeccccccccccceeeeccCCceeeEecchhheeeEEEeecCCcEEEEEeccCcEEEEecccccc
Confidence 34566778999999998773 222333443344887763 347899999999999996 67899999999999
Q ss_pred EEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCC-EEEEEecCCeEEEEE
Q psy14906 114 VHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD-IIGVGLSNKKIILHN 190 (583)
Q Consensus 114 v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~d~~i~iw~ 190 (583)
|+++ +|-=..+|.|..+|+|.+++++.++.+.+++ ...+.|+.++|.-||+ .+|+|+..|.+.+||
T Consensus 205 IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk-----------~d~g~VtslSFrtDG~p~las~~~~G~m~~wD 273 (910)
T KOG1539|consen 205 ITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFK-----------QDWGRVTSLSFRTDGNPLLASGRSNGDMAFWD 273 (910)
T ss_pred eeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEE-----------ccccceeEEEeccCCCeeEEeccCCceEEEEE
Confidence 9999 8888999999999999999999999999996 3359999999999998 557777789999999
Q ss_pred ccCCceeEEEe-ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC----eehhhhhhccccceEEEEEe-cCCCEEE
Q psy14906 191 ILTDESLMEFI-QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR----QVENQIKKAHRKVVTGAHFL-YNEPLLV 264 (583)
Q Consensus 191 ~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~~v~~~~~~-~~~~~l~ 264 (583)
++..+.+..+. .|.+.|..+.|.|..+ ++++++.|..+++|=.+++ +.++.- .||..+..++.|. .+|..+.
T Consensus 274 Le~kkl~~v~~nah~~sv~~~~fl~~ep-Vl~ta~~DnSlk~~vfD~~dg~pR~LR~R-~GHs~Pp~~irfy~~~g~~il 351 (910)
T KOG1539|consen 274 LEKKKLINVTRNAHYGSVTGATFLPGEP-VLVTAGADNSLKVWVFDSGDGVPRLLRSR-GGHSAPPSCIRFYGSQGHFIL 351 (910)
T ss_pred cCCCeeeeeeeccccCCcccceecCCCc-eEeeccCCCceeEEEeeCCCCcchheeec-cCCCCCchheeeeccCcEEEE
Confidence 99888777766 7889999999999888 9999999999988866543 333333 7999999999998 7889999
Q ss_pred EEeCCCeEEEEEccCCCCCceeeE--------------EeccCCCCCeeEEEeeC----CCCEEEEeeCCCcEEEEEccc
Q psy14906 265 TSSPDNTLKLWIFDKADGNGRLLR--------------IREGHSAPPNYIQFYGN----SSDNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 265 s~~~d~~i~~w~~~~~~~~~~~~~--------------~~~~~~~~v~~~~~~~~----~~~~l~~~~~dg~i~iwd~~~ 326 (583)
+++.|++++.+++-......+.-+ ...-.-.+|..+++... ..+.+.+.-.+...+.|+.++
T Consensus 352 sa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n 431 (910)
T KOG1539|consen 352 SAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRN 431 (910)
T ss_pred ecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccC
Confidence 999999999886532211111000 01112235666655421 124555556678899999987
Q ss_pred cccc-eeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecc
Q psy14906 327 ETSN-KNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPE 405 (583)
Q Consensus 327 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 405 (583)
...- ..+......+ ......+.+. ...++..+.+...|.|.+|++..+.......
T Consensus 432 ~~~G~~~L~~~~~~~----------------~~~~~~av~v-----s~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~--- 487 (910)
T KOG1539|consen 432 KTSGRHVLDPKRFKK----------------DDINATAVCV-----SFCGNFVFIGYSKGTIDRFNMQSGIHRKSFG--- 487 (910)
T ss_pred cccccEEecCccccc----------------cCcceEEEEE-----eccCceEEEeccCCeEEEEEcccCeeecccc---
Confidence 6552 2221111000 0111111111 2236788889999999999998775443322
Q ss_pred cccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEE
Q psy14906 406 RCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKV 485 (583)
Q Consensus 406 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~i 485 (583)
....|..+++.++...-++.+++++.+|.+.+||..+..+...+ .-...+.++.++.....++.+..|-.|++
T Consensus 488 -~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l------~l~~~~~~iv~hr~s~l~a~~~ddf~I~v 560 (910)
T KOG1539|consen 488 -DSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSL------RLGSSITGIVYHRVSDLLAIALDDFSIRV 560 (910)
T ss_pred -cCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeee------ccCCCcceeeeeehhhhhhhhcCceeEEE
Confidence 12345588999999999999999999999999999988877776 34567889999998899999999999999
Q ss_pred EEccCCCCCceEEee-ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeC
Q psy14906 486 WHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564 (583)
Q Consensus 486 wd~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~ 564 (583)
+|..+. +..+.+. |.+.|++++|||||++|++++.|++|++||+.++.++..+. -..+.+++.|||+|.+|||+..
T Consensus 561 vD~~t~--kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~-vd~~~~sls~SPngD~LAT~Hv 637 (910)
T KOG1539|consen 561 VDVVTR--KVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL-VDSPCTSLSFSPNGDFLATVHV 637 (910)
T ss_pred EEchhh--hhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe-cCCcceeeEECCCCCEEEEEEe
Confidence 999998 8888887 66799999999999999999999999999999999998776 5678999999999999999998
Q ss_pred C-CeEEEEeC
Q psy14906 565 D-CTIRVWDI 573 (583)
Q Consensus 565 d-~~i~vw~~ 573 (583)
| .-|++|.-
T Consensus 638 d~~gIylWsN 647 (910)
T KOG1539|consen 638 DQNGIYLWSN 647 (910)
T ss_pred cCceEEEEEc
Confidence 8 67999963
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-37 Score=277.88 Aligned_cols=511 Identities=14% Similarity=0.141 Sum_probs=374.1
Q ss_pred eeeeeeeecCcccEEEEEeCCCceEEEEe-eCCeEEEEecCC-cEEEeecCCC-CCCeEEEEe--eCeEEEEEcCCeEEE
Q psy14906 22 HRALGYVSNHLPVVARFIRRRKETLFVTC-VGKAFHVYGCNH-FKLLSVSPQH-EDDITCLSS--DFFHIYTSANNIIYA 96 (583)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~p~~~~~~i~~~-~~~~i~v~d~~~-~~~~~~~~~h-~~~v~~~~~--~~~~~~~~~~~~i~v 96 (583)
.|.+. +.+.-..+++|+.+.+. ++.+ .++.|.+|++.. .-+..++.++ +..|-++++ .+++++.+.+|.|.-
T Consensus 18 crf~d-~~Ps~I~slA~s~kS~~--lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~E 94 (691)
T KOG2048|consen 18 CRFVD-YKPSEIVSLAYSHKSNQ--LAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITE 94 (691)
T ss_pred EEEEe-eeccceEEEEEeccCCc--eeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEE
Confidence 46666 66777788999866666 5555 899999999987 4444566654 567888998 459999999999999
Q ss_pred Eec-cceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCC
Q psy14906 97 WRR-GIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV 173 (583)
Q Consensus 97 w~~-~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 173 (583)
||+ +.+....+....+.|+++ +|.+..++.|++||.+...+...++......+. ...++|.++.|+|+
T Consensus 95 wDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~---------rq~sRvLslsw~~~ 165 (691)
T KOG2048|consen 95 WDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLM---------RQKSRVLSLSWNPT 165 (691)
T ss_pred EecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecc---------cccceEEEEEecCC
Confidence 996 678888889999999997 899999999999998888888888877666553 55789999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCceeEEEe--------ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhh
Q psy14906 174 VDIIGVGLSNKKIILHNILTDESLMEFI--------QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKK 245 (583)
Q Consensus 174 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 245 (583)
+..|+.|+.||.|++||..++..+.... ....-|+++.|..++ .+++|...|+|++||...+.+++.+ .
T Consensus 166 ~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~--tI~sgDS~G~V~FWd~~~gTLiqS~-~ 242 (691)
T KOG2048|consen 166 GTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS--TIASGDSAGTVTFWDSIFGTLIQSH-S 242 (691)
T ss_pred ccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC--cEEEecCCceEEEEcccCcchhhhh-h
Confidence 9999999999999999999998777322 133568899999888 5999999999999999999999999 8
Q ss_pred ccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcc
Q psy14906 246 AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325 (583)
Q Consensus 246 ~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 325 (583)
.|.+.|.+++..+++.++++++.|+.+..+.......+.........|...+.+++..+ + .+++|+.|.++.+-..+
T Consensus 243 ~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~-~--~l~sgG~d~~l~i~~s~ 319 (691)
T KOG2048|consen 243 CHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIE-N--ALISGGRDFTLAICSSR 319 (691)
T ss_pred hhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeec-c--eEEecceeeEEEEcccc
Confidence 99999999999999999999999999988866544333334455667888999999985 3 99999999998877655
Q ss_pred ccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccccee--ee
Q psy14906 326 SETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF--LV 403 (583)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~ 403 (583)
..+..... .....+..... .....+.+...-....+.+|.+......... ..
T Consensus 320 ~~~~~~h~--------------------~~~~~p~~~~v------~~a~~~~L~~~w~~h~v~lwrlGS~~~~g~~~~~~ 373 (691)
T KOG2048|consen 320 EFKNMDHR--------------------QKNLFPASDRV------SVAPENRLLVLWKAHGVDLWRLGSVILQGEYNYIH 373 (691)
T ss_pred ccCchhhh--------------------cccccccccee------ecCccceEEEEeccccccceeccCcccccccChhh
Confidence 42111000 00000000000 0111223333333444455555443221100 00
Q ss_pred cccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee-cCCc
Q psy14906 404 PERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG-NDQT 482 (583)
Q Consensus 404 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~ 482 (583)
...+.......|.+.+++|+|++++.++-. .+++|.++....+.................+.|+-|++.++.++ .+..
T Consensus 374 Llkl~~k~~~nIs~~aiSPdg~~Ia~st~~-~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~~~ 452 (691)
T KOG2048|consen 374 LLKLFTKEKENISCAAISPDGNLIAISTVS-RTKIYRLQPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNIFS 452 (691)
T ss_pred heeeecCCccceeeeccCCCCCEEEEeecc-ceEEEEeccCcceeEEEeccchhhhccceeeEEEecCceEEEEecccce
Confidence 011112223679999999999999998754 37778776533222221111133445677888998988887777 6778
Q ss_pred EEEEEccCCCCCceEEeec---cCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecC-CCcE
Q psy14906 483 VKVWHFKQTGKPPLRSIKL---DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSP-DSRW 558 (583)
Q Consensus 483 i~iwd~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~-d~~~ 558 (583)
+.+.++++...+.+..+.. ...|+.+..||+|+++|+.+..|.|.+|++++++.-.....-...|+.++|+| +.+.
T Consensus 453 le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~g~I~v~nl~~~~~~~l~~rln~~vTa~~~~~~~~~~ 532 (691)
T KOG2048|consen 453 LEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAISTRGQIFVYNLETLESHLLKVRLNIDVTAAAFSPFVRNR 532 (691)
T ss_pred eEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEeccceEEEEEcccceeecchhccCcceeeeeccccccCc
Confidence 8888888764344333322 35799999999999999999999999999998876544434457899999995 6678
Q ss_pred EEEEeCCCeEEEEeCCCcc
Q psy14906 559 LITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 559 l~s~~~d~~i~vw~~~~~~ 577 (583)
|+.+..|+.+.-+|++..+
T Consensus 533 lvvats~nQv~efdi~~~~ 551 (691)
T KOG2048|consen 533 LVVATSNNQVFEFDIEARN 551 (691)
T ss_pred EEEEecCCeEEEEecchhh
Confidence 9999999999999995443
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-39 Score=259.70 Aligned_cols=292 Identities=17% Similarity=0.253 Sum_probs=242.6
Q ss_pred eeeeecccCccEEEE--ccC-CCEEEEEeCCCcEEEEEcCCCc---EEEEeeccCCceEEecccCCcceEEEeeCCCCCE
Q psy14906 103 IVGTYKGHTSPVHLI--LPF-GPHLISVDEESNVKVWDIKAEE---TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDI 176 (583)
Q Consensus 103 ~~~~~~~h~~~v~~i--s~~-~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 176 (583)
.++.+++|.+++..+ +|- |..||+++.|+.|++|+...+. +...+. .+|...|++++|+|.|++
T Consensus 6 ~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld----------~~hkrsVRsvAwsp~g~~ 75 (312)
T KOG0645|consen 6 LEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLD----------DGHKRSVRSVAWSPHGRY 75 (312)
T ss_pred eEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEecc----------ccchheeeeeeecCCCcE
Confidence 467788999999887 676 7899999999999999988533 333332 289999999999999999
Q ss_pred EEEEecCCeEEEEEccCC--ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC---eehhhhhhccccce
Q psy14906 177 IGVGLSNKKIILHNILTD--ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR---QVENQIKKAHRKVV 251 (583)
Q Consensus 177 l~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~---~~~~~~~~~~~~~v 251 (583)
||+|+.|.++.||.-..+ +++..+.+|...|.+++|+++|. +||++++|..|.||.+..+ ++...+ +.|...|
T Consensus 76 La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~-~LATCSRDKSVWiWe~deddEfec~aVL-~~HtqDV 153 (312)
T KOG0645|consen 76 LASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGN-YLATCSRDKSVWIWEIDEDDEFECIAVL-QEHTQDV 153 (312)
T ss_pred EEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCC-EEEEeeCCCeEEEEEecCCCcEEEEeee-ccccccc
Confidence 999999999999986643 78888999999999999999999 9999999999999999743 566667 8999999
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccce
Q psy14906 252 TGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNK 331 (583)
Q Consensus 252 ~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 331 (583)
..+.|+|...+|++++.|++|++|+-+. .....+..++.+|...|.+++|.+ .|.+|++++.|+++++|...+.-.
T Consensus 154 K~V~WHPt~dlL~S~SYDnTIk~~~~~~-dddW~c~~tl~g~~~TVW~~~F~~-~G~rl~s~sdD~tv~Iw~~~~~~~-- 229 (312)
T KOG0645|consen 154 KHVIWHPTEDLLFSCSYDNTIKVYRDED-DDDWECVQTLDGHENTVWSLAFDN-IGSRLVSCSDDGTVSIWRLYTDLS-- 229 (312)
T ss_pred cEEEEcCCcceeEEeccCCeEEEEeecC-CCCeeEEEEecCccceEEEEEecC-CCceEEEecCCcceEeeeeccCcc--
Confidence 9999999999999999999999996543 557899999999999999999997 799999999999999998653210
Q ss_pred eeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccC
Q psy14906 332 NLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAK 411 (583)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 411 (583)
..+
T Consensus 230 -----------------------------------------------------------------------------~~~ 232 (312)
T KOG0645|consen 230 -----------------------------------------------------------------------------GMH 232 (312)
T ss_pred -----------------------------------------------------------------------------hhc
Confidence 111
Q ss_pred CCCceEEEEccCCcEEEEEecCceEEEEEcccCc--cccccCCCCCCCcccCeeEEEEeCC-CcEEEEeecCCcEEEEEc
Q psy14906 412 QSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGA--HRGSYGHDNQPGHVGGVRGVVSDNL-NQIVISGGNDQTVKVWHF 488 (583)
Q Consensus 412 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~ 488 (583)
...+..+.|. ...|++++.|+.|++|.-...- ....+.......|...|++++|.|. .++|++++.||.|++|.+
T Consensus 233 sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l 310 (312)
T KOG0645|consen 233 SRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWEL 310 (312)
T ss_pred ccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEe
Confidence 1456777787 5689999999999999876431 1111111111679999999999995 679999999999999987
Q ss_pred c
Q psy14906 489 K 489 (583)
Q Consensus 489 ~ 489 (583)
.
T Consensus 311 ~ 311 (312)
T KOG0645|consen 311 E 311 (312)
T ss_pred c
Confidence 5
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=265.71 Aligned_cols=291 Identities=19% Similarity=0.333 Sum_probs=253.6
Q ss_pred eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC-eehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEE
Q psy14906 196 SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR-QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKL 274 (583)
Q Consensus 196 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~ 274 (583)
++..+.+|++.|+.+.|+|+|. +|++|+.|..|.+|+.... +-...+ ++|.+.|..+.|.+|++.+++++.|.+++.
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs-~~aSgG~Dr~I~LWnv~gdceN~~~l-kgHsgAVM~l~~~~d~s~i~S~gtDk~v~~ 116 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGS-CFASGGSDRAIVLWNVYGDCENFWVL-KGHSGAVMELHGMRDGSHILSCGTDKTVRG 116 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCC-eEeecCCcceEEEEeccccccceeee-ccccceeEeeeeccCCCEEEEecCCceEEE
Confidence 4455679999999999999999 9999999999999996543 334445 799999999999999999999999999999
Q ss_pred EEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcccc
Q psy14906 275 WIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNE 354 (583)
Q Consensus 275 w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (583)
||.. .++..+.+++|..-|+.+.-+.....++.+++.|+++++||+++...++.+...
T Consensus 117 wD~~----tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~k------------------ 174 (338)
T KOG0265|consen 117 WDAE----TGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENK------------------ 174 (338)
T ss_pred Eecc----cceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccc------------------
Confidence 9765 678899999999999998855434567778899999999999987766554211
Q ss_pred ccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCc
Q psy14906 355 KFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434 (583)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 434 (583)
.+++++.|...+..+.+|.-|+
T Consensus 175 ----------------------------------------------------------yqltAv~f~d~s~qv~sggIdn 196 (338)
T KOG0265|consen 175 ----------------------------------------------------------YQLTAVGFKDTSDQVISGGIDN 196 (338)
T ss_pred ----------------------------------------------------------eeEEEEEecccccceeeccccC
Confidence 5689999999999999999999
Q ss_pred eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCC--CCceEEeecc-----CCeee
Q psy14906 435 HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG--KPPLRSIKLD-----NGISF 507 (583)
Q Consensus 435 ~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~-----~~v~~ 507 (583)
.|++||++.+.....+ .+|...|+.+..+|+|.++.+-+.|.++++||++... .+++..+..+ .....
T Consensus 197 ~ikvWd~r~~d~~~~l-----sGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~ 271 (338)
T KOG0265|consen 197 DIKVWDLRKNDGLYTL-----SGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLK 271 (338)
T ss_pred ceeeeccccCcceEEe-----ecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcce
Confidence 9999999999999998 8999999999999999999999999999999997542 1345555433 24667
Q ss_pred EEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 508 FRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 508 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
++|+|++..+.+|+.|..+++||......+..+.||.+.|.+++|+|...+|.+++.|.+|++=.+
T Consensus 272 cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lgei 337 (338)
T KOG0265|consen 272 CSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGEI 337 (338)
T ss_pred eeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeecc
Confidence 899999999999999999999999999999999999999999999999999999999999987443
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=276.61 Aligned_cols=296 Identities=18% Similarity=0.247 Sum_probs=269.0
Q ss_pred EEeccceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCC
Q psy14906 96 AWRRGIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV 173 (583)
Q Consensus 96 vw~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 173 (583)
.|-....+.+.+.+|..+|+.+ .|+-..++++++|++|++||..+|++...++ +|...+..++|+..
T Consensus 93 ~wipRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~Lr-----------GHt~sv~di~~~a~ 161 (406)
T KOG0295|consen 93 LWIPRPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLR-----------GHTDSVFDISFDAS 161 (406)
T ss_pred hcCCCCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhh-----------ccccceeEEEEecC
Confidence 3555557788899999999997 9999999999999999999999999988888 99999999999999
Q ss_pred CCEEEEEecCCeEEEEEccC-CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceE
Q psy14906 174 VDIIGVGLSNKKIILHNILT-DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVT 252 (583)
Q Consensus 174 ~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~ 252 (583)
|++||+++.|-.+++||..+ .++++.+.+|...|.++.|-|.|. ++++++.|.+|+.|++.++.++.++ .+|...|.
T Consensus 162 Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd-~ilS~srD~tik~We~~tg~cv~t~-~~h~ewvr 239 (406)
T KOG0295|consen 162 GKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGD-HILSCSRDNTIKAWECDTGYCVKTF-PGHSEWVR 239 (406)
T ss_pred ccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCC-eeeecccccceeEEecccceeEEec-cCchHhEE
Confidence 99999999999999999986 577888889999999999999998 8999999999999999999999999 89999999
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeC--------------CCCEEEEeeCCCc
Q psy14906 253 GAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGN--------------SSDNILSAAGDST 318 (583)
Q Consensus 253 ~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------------~~~~l~~~~~dg~ 318 (583)
.++.+.||.++++++.|.++++|-+. ...+...++.|..+|.+++|.|. .++++.+++.|++
T Consensus 240 ~v~v~~DGti~As~s~dqtl~vW~~~----t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDkt 315 (406)
T KOG0295|consen 240 MVRVNQDGTIIASCSNDQTLRVWVVA----TKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKT 315 (406)
T ss_pred EEEecCCeeEEEecCCCceEEEEEec----cchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccce
Confidence 99999999999999999999999654 45667788899999999999863 1358999999999
Q ss_pred EEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccc
Q psy14906 319 LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMD 398 (583)
Q Consensus 319 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 398 (583)
|++||+.++.++-++.
T Consensus 316 Ik~wdv~tg~cL~tL~---------------------------------------------------------------- 331 (406)
T KOG0295|consen 316 IKIWDVSTGMCLFTLV---------------------------------------------------------------- 331 (406)
T ss_pred EEEEeccCCeEEEEEe----------------------------------------------------------------
Confidence 9999999987765541
Q ss_pred ceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee
Q psy14906 399 DMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG 478 (583)
Q Consensus 399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 478 (583)
+|.+.|..++|+|.|+||+++.+|+++++||++++++...+ ..|..-++++.|+.+..++++|+
T Consensus 332 -----------ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~-----~ah~hfvt~lDfh~~~p~VvTGs 395 (406)
T KOG0295|consen 332 -----------GHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTL-----EAHEHFVTSLDFHKTAPYVVTGS 395 (406)
T ss_pred -----------cccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeecc-----CCCcceeEEEecCCCCceEEecc
Confidence 22378999999999999999999999999999999999999 79999999999999999999999
Q ss_pred cCCcEEEEEc
Q psy14906 479 NDQTVKVWHF 488 (583)
Q Consensus 479 ~dg~i~iwd~ 488 (583)
-|.++++|..
T Consensus 396 Vdqt~KvwEc 405 (406)
T KOG0295|consen 396 VDQTVKVWEC 405 (406)
T ss_pred ccceeeeeec
Confidence 9999999964
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=255.09 Aligned_cols=292 Identities=14% Similarity=0.253 Sum_probs=243.6
Q ss_pred ceeEEEeccCCCeEEEEEecC-CCCEEEEEcCCCcEEEEeCCC---CeehhhhhhccccceEEEEEecCCCEEEEEeCCC
Q psy14906 195 ESLMEFIQTWGPVTALSFRTD-GPPMMVSGSNTGHLTVWNLED---RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN 270 (583)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~vwd~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 270 (583)
..++.+.+|.+.+..++|+|- |. +|++++.|..|++|+... -.+...+..+|+..|.+++|+|.|++|++++.|.
T Consensus 5 ~~~~~~~gh~~r~W~~awhp~~g~-ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~ 83 (312)
T KOG0645|consen 5 ILEQKLSGHKDRVWSVAWHPGKGV-ILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDA 83 (312)
T ss_pred eeEEeecCCCCcEEEEEeccCCce-EEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccc
Confidence 345678899999999999998 77 899999999999999984 3555566678999999999999999999999999
Q ss_pred eEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchh
Q psy14906 271 TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLE 350 (583)
Q Consensus 271 ~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (583)
++.|| ....++.+++.+++||...|.+++|++ +|.+|++++.|..+.+|.+..+......
T Consensus 84 t~~Iw--~k~~~efecv~~lEGHEnEVK~Vaws~-sG~~LATCSRDKSVWiWe~deddEfec~----------------- 143 (312)
T KOG0645|consen 84 TVVIW--KKEDGEFECVATLEGHENEVKCVAWSA-SGNYLATCSRDKSVWIWEIDEDDEFECI----------------- 143 (312)
T ss_pred eEEEe--ecCCCceeEEeeeeccccceeEEEEcC-CCCEEEEeeCCCeEEEEEecCCCcEEEE-----------------
Confidence 99999 666778899999999999999999996 8999999999999999998754332211
Q ss_pred ccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEE
Q psy14906 351 KMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIG 430 (583)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 430 (583)
.....|...+..+.|+|...+|+++
T Consensus 144 -------------------------------------------------------aVL~~HtqDVK~V~WHPt~dlL~S~ 168 (312)
T KOG0645|consen 144 -------------------------------------------------------AVLQEHTQDVKHVIWHPTEDLLFSC 168 (312)
T ss_pred -------------------------------------------------------eeeccccccccEEEEcCCcceeEEe
Confidence 1122333678899999999999999
Q ss_pred ecCceEEEEEccc---CccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeee
Q psy14906 431 YSSGHVDRFNIQS---GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF 507 (583)
Q Consensus 431 ~~dg~i~i~d~~~---~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~ 507 (583)
+.|++|++|+-.. -.+.+++ .+|...|.+++|++.|..|++++.|++++||..... ....+..++..
T Consensus 169 SYDnTIk~~~~~~dddW~c~~tl-----~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~-----~~~~~sr~~Y~ 238 (312)
T KOG0645|consen 169 SYDNTIKVYRDEDDDDWECVQTL-----DGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD-----LSGMHSRALYD 238 (312)
T ss_pred ccCCeEEEEeecCCCCeeEEEEe-----cCccceEEEEEecCCCceEEEecCCcceEeeeeccC-----cchhcccceEe
Confidence 9999999998773 2456666 799999999999999999999999999999986533 12234467888
Q ss_pred EEeccCCcEEEEEeCCceEEEEEcccc------ceE-EeecccccceeeEEecCC-CcEEEEEeCCCeEEEEeCC
Q psy14906 508 FRTHQESSMLAVCLDDFTVNIIDIDTC------TII-RKLSGHMGQLTDADFSPD-SRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 508 ~~~s~~~~~l~~~~~dg~i~i~d~~~~------~~~-~~~~~h~~~v~~l~~s~d-~~~l~s~~~d~~i~vw~~~ 574 (583)
+.|. ...||+++.|+.|++|.-... +++ ..-..|...|++++|.|. .++|++++.||.|++|.+.
T Consensus 239 v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 239 VPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred eeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 8887 568999999999999976542 112 233468889999999994 7789999999999999875
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=261.30 Aligned_cols=295 Identities=18% Similarity=0.245 Sum_probs=254.3
Q ss_pred eeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcC-CCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEE
Q psy14906 103 IVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIK-AEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV 179 (583)
Q Consensus 103 ~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 179 (583)
.+..+.+|++.|..+ +|+|.+||||+.|..|.+|++. ..+....++ +|.+.|..+.|.+|++.|++
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lk-----------gHsgAVM~l~~~~d~s~i~S 107 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLK-----------GHSGAVMELHGMRDGSHILS 107 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeec-----------cccceeEeeeeccCCCEEEE
Confidence 344577999999986 9999999999999999999954 445566666 99999999999999999999
Q ss_pred EecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecC
Q psy14906 180 GLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN 259 (583)
Q Consensus 180 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 259 (583)
++.|.+++.||.++|+.++.+++|...|+++.-+.-|..++.+++.|+++++||+++.+.++++ ...-+++++.|..+
T Consensus 108 ~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~--~~kyqltAv~f~d~ 185 (338)
T KOG0265|consen 108 CGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF--ENKYQLTAVGFKDT 185 (338)
T ss_pred ecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcc--ccceeEEEEEeccc
Confidence 9999999999999999999999999999999966677778999999999999999999888887 45778999999999
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhh
Q psy14906 260 EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAN 339 (583)
Q Consensus 260 ~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 339 (583)
+..+.+|+-|+.|++||+. ....+..+.||.++|+.+..+| +|.++++-+.|.++++||++.....+.
T Consensus 186 s~qv~sggIdn~ikvWd~r----~~d~~~~lsGh~DtIt~lsls~-~gs~llsnsMd~tvrvwd~rp~~p~~R------- 253 (338)
T KOG0265|consen 186 SDQVISGGIDNDIKVWDLR----KNDGLYTLSGHADTITGLSLSR-YGSFLLSNSMDNTVRVWDVRPFAPSQR------- 253 (338)
T ss_pred ccceeeccccCceeeeccc----cCcceEEeecccCceeeEEecc-CCCccccccccceEEEEEecccCCCCc-------
Confidence 9999999999999999665 4567889999999999999997 899999999999999999876433221
Q ss_pred hhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEE
Q psy14906 340 RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVY 419 (583)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 419 (583)
.+.++.-..... +......+
T Consensus 254 ----------------------------------------------~v~if~g~~hnf--------------eknlL~cs 273 (338)
T KOG0265|consen 254 ----------------------------------------------CVKIFQGHIHNF--------------EKNLLKCS 273 (338)
T ss_pred ----------------------------------------------eEEEeecchhhh--------------hhhcceee
Confidence 111111111000 13456789
Q ss_pred EccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE
Q psy14906 420 ITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487 (583)
Q Consensus 420 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 487 (583)
|+|+++.+.+|+.|..+++||..+...+..+ ++|.+.|.+++|+|...+|.+++.|.+|++=.
T Consensus 274 wsp~~~~i~ags~dr~vyvwd~~~r~~lykl-----pGh~gsvn~~~Fhp~e~iils~~sdk~i~lge 336 (338)
T KOG0265|consen 274 WSPNGTKITAGSADRFVYVWDTTSRRILYKL-----PGHYGSVNEVDFHPTEPIILSCSSDKTIYLGE 336 (338)
T ss_pred ccCCCCccccccccceEEEeecccccEEEEc-----CCcceeEEEeeecCCCcEEEEeccCceeEeec
Confidence 9999999999999999999999999999888 89999999999999999999999999998743
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=265.32 Aligned_cols=477 Identities=16% Similarity=0.224 Sum_probs=352.0
Q ss_pred ccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeCe--EEEEE----cCC-----eEEEEe-cc
Q psy14906 33 PVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFF--HIYTS----ANN-----IIYAWR-RG 100 (583)
Q Consensus 33 ~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~~----~~~-----~i~vw~-~~ 100 (583)
-..+-+.|.+.- +|-....+.+||.+... ++.+.+|...|.||+.+|. .++.+ .+| .+++|| ..
T Consensus 68 R~Nly~lptgE~---vyfvA~V~Vl~n~ee~~-Qr~y~GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~ 143 (626)
T KOG2106|consen 68 RNNLYLLPTGEL---VYFVAAVGVLYNWEERS-QRHYLGHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVT 143 (626)
T ss_pred eceeEEccCccE---EEEeccEEEEEeehhhh-cccccCCCCceEEEeecCCceeeccCcccccCCCcCCCeeeeccccc
Confidence 344456555443 33356778888875433 3446789999999999772 22212 112 699999 45
Q ss_pred ceeeeeecccCccEEEE----ccCCCEEEEE--eCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCC
Q psy14906 101 IDIVGTYKGHTSPVHLI----LPFGPHLISV--DEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVV 174 (583)
Q Consensus 101 ~~~~~~~~~h~~~v~~i----s~~~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 174 (583)
-..+..+...+..|.++ ...|.+|+.. +.+..+.+||++.+......+ ..+..|....|+|.+
T Consensus 144 L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk-----------~sne~v~~a~FHPtd 212 (626)
T KOG2106|consen 144 LSTLHVIGFFDRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVK-----------TSNEVVFLATFHPTD 212 (626)
T ss_pred ceeeeeeccccccceeeeecccCCCceEEEecCCCccccchhhchhhhccCcce-----------eccceEEEEEeccCC
Confidence 56677777778888887 3345666665 345689999999988877776 678899999999988
Q ss_pred CEEEEEecCCeEEEEEccCCceeEE---Eecc-CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccc
Q psy14906 175 DIIGVGLSNKKIILHNILTDESLME---FIQT-WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKV 250 (583)
Q Consensus 175 ~~l~~~~~d~~i~iw~~~~~~~~~~---~~~~-~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 250 (583)
..|++....+.+..|+++.+...++ |..+ +.-|.|++|.++|+ +++|.++|.|.||+..+.+..++. ..|.+.
T Consensus 213 ~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~engd--viTgDS~G~i~Iw~~~~~~~~k~~-~aH~gg 289 (626)
T KOG2106|consen 213 PNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFLENGD--VITGDSGGNILIWSKGTNRISKQV-HAHDGG 289 (626)
T ss_pred CcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEcCCCC--EEeecCCceEEEEeCCCceEEeEe-eecCCc
Confidence 7777777778999999998765544 3322 36799999999997 899999999999999988888888 599999
Q ss_pred eEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC------------------c------------------eeeEEeccCC
Q psy14906 251 VTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN------------------G------------------RLLRIREGHS 294 (583)
Q Consensus 251 v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~------------------~------------------~~~~~~~~~~ 294 (583)
|.+++...+|.+| +|+.|+.|..||-+..... + .......+|.
T Consensus 290 v~~L~~lr~Gtll-SGgKDRki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~ 368 (626)
T KOG2106|consen 290 VFSLCMLRDGTLL-SGGKDRKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHG 368 (626)
T ss_pred eEEEEEecCccEe-ecCccceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecc
Confidence 9999999999755 5999999999973221100 0 0001234677
Q ss_pred CCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccccccc
Q psy14906 295 APPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDW 374 (583)
Q Consensus 295 ~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (583)
.....++.+| +..++++++.|+.+++|+-......+.+ ..+..+..+.+
T Consensus 369 delwgla~hp-s~~q~~T~gqdk~v~lW~~~k~~wt~~~------------------------~d~~~~~~fhp------ 417 (626)
T KOG2106|consen 369 DELWGLATHP-SKNQLLTCGQDKHVRLWNDHKLEWTKII------------------------EDPAECADFHP------ 417 (626)
T ss_pred cceeeEEcCC-ChhheeeccCcceEEEccCCceeEEEEe------------------------cCceeEeeccC------
Confidence 8888899987 7889999999999999992221111111 11111222111
Q ss_pred ccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcccc-ccCCC
Q psy14906 375 NNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRG-SYGHD 453 (583)
Q Consensus 375 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~ 453 (583)
...++.+...|...+.|.++..+...... ..+++++.|+|+|.++|+|+.|+.|++|.+..+.... ...
T Consensus 418 sg~va~Gt~~G~w~V~d~e~~~lv~~~~d--------~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~-- 487 (626)
T KOG2106|consen 418 SGVVAVGTATGRWFVLDTETQDLVTIHTD--------NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVG-- 487 (626)
T ss_pred cceEEEeeccceEEEEecccceeEEEEec--------CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEee--
Confidence 23788888999999999888655443322 2689999999999999999999999999987554433 332
Q ss_pred CCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee-------------------ccCCeeeEEeccCC
Q psy14906 454 NQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-------------------LDNGISFFRTHQES 514 (583)
Q Consensus 454 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------------~~~~v~~~~~s~~~ 514 (583)
..|..+|+.+.|++|+++|.+-+.|-.|..|..... +.....+ +...+..++-+.++
T Consensus 488 --k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~--~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~rs~~~ 563 (626)
T KOG2106|consen 488 --KCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPSEC--KQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVARSHCE 563 (626)
T ss_pred --eecCceeEEeeecCCCceEEeccCceEEEEEccccC--cccceecceeeeeeEEEEEEEEecccCCchHHHhhhhhhh
Confidence 345589999999999999999999999999944322 2111111 12356667778889
Q ss_pred cEEEEEeCCceEEEEEcccc---ceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 515 SMLAVCLDDFTVNIIDIDTC---TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 515 ~~l~~~~~dg~i~i~d~~~~---~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
+++|+|.+.|.|++|...-- ....++.+|.+.|++++|..+...|++.+.|..|..|++
T Consensus 564 ~~lA~gdd~g~v~lf~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d~~li~tg~D~Si~qW~l 625 (626)
T KOG2106|consen 564 KLLASGDDFGKVHLFSYPCSSPRAPSHEYGGHSSHVTNVAFLCKDSHLISTGKDTSIMQWRL 625 (626)
T ss_pred hhhhccccCceEEEEccccCCCcccceeeccccceeEEEEEeeCCceEEecCCCceEEEEEe
Confidence 99999999999999987533 344677899999999999998888888889999999986
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-37 Score=284.82 Aligned_cols=467 Identities=14% Similarity=0.176 Sum_probs=335.7
Q ss_pred cccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeC---eEEEEEcCCeEEEEec-cceeeeee
Q psy14906 32 LPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDF---FHIYTSANNIIYAWRR-GIDIVGTY 107 (583)
Q Consensus 32 ~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~---~~~~~~~~~~i~vw~~-~~~~~~~~ 107 (583)
-...+.|||..+= +++.-..+.|++||..-+.++..+..|+++|..++|++ -+++|+.|-.|+||+. ..+++.+|
T Consensus 11 RvKglsFHP~rPw-ILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL 89 (1202)
T KOG0292|consen 11 RVKGLSFHPKRPW-ILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTL 89 (1202)
T ss_pred cccceecCCCCCE-EEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhh
Confidence 3456789988654 34444899999999999999999999999999999955 5888899999999997 46889999
Q ss_pred cccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCe
Q psy14906 108 KGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKK 185 (583)
Q Consensus 108 ~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~ 185 (583)
.||-+.|..+ ++.-.+++|+|+|.+|+||+++++.++..+. +|...|.|..|+|...++++++-|.+
T Consensus 90 ~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavlt-----------GHnHYVMcAqFhptEDlIVSaSLDQT 158 (1202)
T KOG0292|consen 90 LGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLT-----------GHNHYVMCAQFHPTEDLIVSASLDQT 158 (1202)
T ss_pred ccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEe-----------cCceEEEeeccCCccceEEEecccce
Confidence 9999999986 8889999999999999999999999999998 99999999999999999999999999
Q ss_pred EEEEEccCCc-----------------------------eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q psy14906 186 IILHNILTDE-----------------------------SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED 236 (583)
Q Consensus 186 i~iw~~~~~~-----------------------------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 236 (583)
|++||+..-+ ....+.+|...|+-++|+|.-+ ++++|+.|..|++|.+..
T Consensus 159 VRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlp-liVSG~DDRqVKlWrmne 237 (1202)
T KOG0292|consen 159 VRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLP-LIVSGADDRQVKLWRMNE 237 (1202)
T ss_pred EEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcc-eEEecCCcceeeEEEecc
Confidence 9999985310 1134568999999999999998 999999999999999875
Q ss_pred Ce--ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee
Q psy14906 237 RQ--VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 237 ~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 314 (583)
.+ .+-+. .+|.+.|.++-|+|..+++++.++|++|++||++ ....+.+++...+....++.+| ..++++ ++
T Consensus 238 tKaWEvDtc-rgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~----kRt~v~tfrrendRFW~laahP-~lNLfA-Ag 310 (1202)
T KOG0292|consen 238 TKAWEVDTC-RGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMT----KRTSVQTFRRENDRFWILAAHP-ELNLFA-AG 310 (1202)
T ss_pred ccceeehhh-hcccCCcceEEecCccceeEecCCCccEEEEecc----cccceeeeeccCCeEEEEEecC-Ccceee-ee
Confidence 43 34455 7999999999999999999999999999999876 4566777877778889999997 565555 55
Q ss_pred CCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCc
Q psy14906 315 GDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYK 394 (583)
Q Consensus 315 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 394 (583)
.|+-+.+|.++...+...+. ++.+.... +..++.+|+.+
T Consensus 311 HDsGm~VFkleRErpa~~v~----------------------------------------~n~LfYvk-d~~i~~~d~~t 349 (1202)
T KOG0292|consen 311 HDSGMIVFKLERERPAYAVN----------------------------------------GNGLFYVK-DRFIRSYDLRT 349 (1202)
T ss_pred cCCceEEEEEcccCceEEEc----------------------------------------CCEEEEEc-cceEEeeeccc
Confidence 67778888887654433221 22333333 77888888877
Q ss_pred ccccceeeecccccccCCCCceEEEEccCCcEEEEEe--cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc
Q psy14906 395 SKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY--SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472 (583)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 472 (583)
...... ..-+.......++.++.++|....+..++ .+|.-.++.+.+......-... ......... .|-..++
T Consensus 350 ~~d~~v--~~lr~~g~~~~~~~smsYNpae~~vlics~~~n~~y~L~~ipk~~~~~~~~~~--~~k~tG~~a-~fvarNr 424 (1202)
T KOG0292|consen 350 QKDTAV--ASLRRPGTLWQPPRSLSYNPAENAVLICSNLDNGEYELVQIPKDSDGVSDGKD--VKKGTGEGA-LFVARNR 424 (1202)
T ss_pred ccccee--EeccCCCcccCCcceeeeccccCeEEEEeccCCCeEEEEEecCcccccCCchh--hhcCCCCce-EEEEecc
Confidence 432211 11111111225788999999876655553 3455555555433111110000 011111222 2222233
Q ss_pred EEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEe
Q psy14906 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADF 552 (583)
Q Consensus 473 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~ 552 (583)
+.+.--.+..+.+-++.+ +..+.+........+-+...|.+|+.. ...|.+||++..+.+..++ ...|.-+.|
T Consensus 425 favl~k~~~~v~ik~l~N---~vtkkl~~~~~~~~IF~ag~g~lll~~--~~~v~lfdvQq~~~~~si~--~s~vkyvvw 497 (1202)
T KOG0292|consen 425 FAVLDKSNEQVVIKNLKN---KVTKKLLLPESTDDIFYAGTGNLLLRS--PDSVTLFDVQQKKKVGSIK--VSKVKYVVW 497 (1202)
T ss_pred eEEEEecCcceEEecccc---hhhhcccCcccccceeeccCccEEEEc--CCeEEEEEeecceEEEEEe--cCceeEEEE
Confidence 333333345566656554 344444444455666666666666543 3478999999888887776 467888899
Q ss_pred cCCCcEEEEEeCCCeEEEEe
Q psy14906 553 SPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 553 s~d~~~l~s~~~d~~i~vw~ 572 (583)
|+|..++|--+. .+|.|.+
T Consensus 498 s~dm~~vAll~K-h~i~i~~ 516 (1202)
T KOG0292|consen 498 SNDMSRVALLSK-HTITIAD 516 (1202)
T ss_pred cCccchhhhccc-ceEEEEe
Confidence 988776654442 3344444
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-40 Score=279.70 Aligned_cols=280 Identities=19% Similarity=0.311 Sum_probs=244.0
Q ss_pred CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q psy14906 204 WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN 283 (583)
Q Consensus 204 ~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~ 283 (583)
+.+|..+.|.|+|+ .|++|+..|.+.+|+..+-.....+ .+|..+|.++.|++++.++++|+.+|.|++|+.+
T Consensus 96 kc~V~~v~WtPeGR-RLltgs~SGEFtLWNg~~fnFEtil-QaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpn----- 168 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGR-RLLTGSQSGEFTLWNGTSFNFETIL-QAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPN----- 168 (464)
T ss_pred ccceeeEEEcCCCc-eeEeecccccEEEecCceeeHHHHh-hhhcccceeEEEccCCCEEEEcCCCceEEecccc-----
Confidence 46899999999999 8999999999999998766655555 8999999999999999999999999999999553
Q ss_pred ceeeEEeccCC-CCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccc
Q psy14906 284 GRLLRIREGHS-APPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVS 362 (583)
Q Consensus 284 ~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (583)
...++.+..|. ..|++++|+| +...+++++.||+|+|||....+....+
T Consensus 169 mnnVk~~~ahh~eaIRdlafSp-nDskF~t~SdDg~ikiWdf~~~kee~vL----------------------------- 218 (464)
T KOG0284|consen 169 MNNVKIIQAHHAEAIRDLAFSP-NDSKFLTCSDDGTIKIWDFRMPKEERVL----------------------------- 218 (464)
T ss_pred hhhhHHhhHhhhhhhheeccCC-CCceeEEecCCCeEEEEeccCCchhhee-----------------------------
Confidence 33344455554 8999999998 6779999999999999998766543322
Q ss_pred eeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcc
Q psy14906 363 QFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQ 442 (583)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~ 442 (583)
.+|.-.+.++.|+|...++++|+.|..|++||.+
T Consensus 219 ----------------------------------------------~GHgwdVksvdWHP~kgLiasgskDnlVKlWDpr 252 (464)
T KOG0284|consen 219 ----------------------------------------------RGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPR 252 (464)
T ss_pred ----------------------------------------------ccCCCCcceeccCCccceeEEccCCceeEeecCC
Confidence 2334679999999999999999999999999999
Q ss_pred cCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee-ccCCeeeEEeccCC-cEEEEE
Q psy14906 443 SGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQES-SMLAVC 520 (583)
Q Consensus 443 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~~~-~~l~~~ 520 (583)
++.++.++ .+|...|..+.|+|++++|++++.|..++++|+++. +.+..++ |...++++.|+|-. .+|.+|
T Consensus 253 Sg~cl~tl-----h~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~m--kEl~~~r~Hkkdv~~~~WhP~~~~lftsg 325 (464)
T KOG0284|consen 253 SGSCLATL-----HGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTM--KELFTYRGHKKDVTSLTWHPLNESLFTSG 325 (464)
T ss_pred Ccchhhhh-----hhccceEEEEEEcCCCCeeEEccCCceEEEEehhHh--HHHHHhhcchhhheeeccccccccceeec
Confidence 99999999 899999999999999999999999999999999976 6666666 66789999999955 488899
Q ss_pred eCCceEEEEEccccceEEee-cccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 521 LDDFTVNIIDIDTCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 521 ~~dg~i~i~d~~~~~~~~~~-~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
+.||.|..|.+...+++..+ .+|...|++++|+|-|.+|++|+.|.++++|.-
T Consensus 326 g~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 326 GSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred cCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence 99999999999866655544 479999999999999999999999999999974
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-40 Score=279.78 Aligned_cols=283 Identities=22% Similarity=0.311 Sum_probs=246.7
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
.-..+|..+.|.|+|+.|++|+..|.+.+|+..+......+..|..+|+++.|++++. ++++|+.+|.|++|+.+ ...
T Consensus 94 Kvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~-wmiSgD~gG~iKyWqpn-mnn 171 (464)
T KOG0284|consen 94 KVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGT-WMISGDKGGMIKYWQPN-MNN 171 (464)
T ss_pred ccccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCC-EEEEcCCCceEEecccc-hhh
Confidence 4467899999999999999999999999999865544445678999999999999999 89999999999999987 444
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
++.+...|...|++++|+|+...|++++.||+|+|||.. ..+....+.+|.-.|.++.|+| ....+++++.|..|
T Consensus 172 Vk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~----~~kee~vL~GHgwdVksvdWHP-~kgLiasgskDnlV 246 (464)
T KOG0284|consen 172 VKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFR----MPKEERVLRGHGWDVKSVDWHP-TKGLIASGSKDNLV 246 (464)
T ss_pred hHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEecc----CCchhheeccCCCCcceeccCC-ccceeEEccCCcee
Confidence 555535566999999999999999999999999999775 3444556799999999999998 67799999999999
Q ss_pred EEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 320 RIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 320 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
++||.+++.++.++.
T Consensus 247 KlWDprSg~cl~tlh----------------------------------------------------------------- 261 (464)
T KOG0284|consen 247 KLWDPRSGSCLATLH----------------------------------------------------------------- 261 (464)
T ss_pred EeecCCCcchhhhhh-----------------------------------------------------------------
Confidence 999999998876541
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCC-CcEEEEee
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNL-NQIVISGG 478 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~ 478 (583)
.|...|..+.|+|++++|++++.|..+++||+++.+.+..+ ++|...|+++.|+|- ..+|.+|+
T Consensus 262 ----------~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~-----r~Hkkdv~~~~WhP~~~~lftsgg 326 (464)
T KOG0284|consen 262 ----------GHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTY-----RGHKKDVTSLTWHPLNESLFTSGG 326 (464)
T ss_pred ----------hccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHh-----hcchhhheeeccccccccceeecc
Confidence 22367999999999999999999999999999988888888 899999999999994 46889999
Q ss_pred cCCcEEEEEccCCCCCceEEe--eccCCeeeEEeccCCcEEEEEeCCceEEEEEc
Q psy14906 479 NDQTVKVWHFKQTGKPPLRSI--KLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531 (583)
Q Consensus 479 ~dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 531 (583)
.||.|..|.+... +++..+ .|...|.+++|+|-|.+|++|+.|.++++|.-
T Consensus 327 ~Dgsvvh~~v~~~--~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 327 SDGSVVHWVVGLE--EPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred CCCceEEEecccc--ccccCCCcccccceeeeeccccceeEeecCCCcceeeecc
Confidence 9999999999865 455444 46679999999999999999999999999975
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-39 Score=297.44 Aligned_cols=297 Identities=18% Similarity=0.331 Sum_probs=246.0
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCC-------------------------------ceeEEEeccCCCeE
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD-------------------------------ESLMEFIQTWGPVT 208 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-------------------------------~~~~~~~~~~~~v~ 208 (583)
.....++|..|++|+.+||.|..|..|++|.+... ....++.+|.++|.
T Consensus 376 nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVy 455 (707)
T KOG0263|consen 376 NTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVY 455 (707)
T ss_pred EcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCcee
Confidence 55678999999999999999999999999998731 12244679999999
Q ss_pred EEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeE
Q psy14906 209 ALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLR 288 (583)
Q Consensus 209 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~ 288 (583)
.+.|+|+.+ +|++++.|+++|+|.+.+..++-.+ ++|..+|..+.|+|.|-+|||++.|++.++|..+ ...+++
T Consensus 456 g~sFsPd~r-fLlScSED~svRLWsl~t~s~~V~y-~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d----~~~PlR 529 (707)
T KOG0263|consen 456 GCSFSPDRR-FLLSCSEDSSVRLWSLDTWSCLVIY-KGHLAPVWDVQFAPRGYYFATASHDQTARLWSTD----HNKPLR 529 (707)
T ss_pred eeeeccccc-ceeeccCCcceeeeecccceeEEEe-cCCCcceeeEEecCCceEEEecCCCceeeeeecc----cCCchh
Confidence 999999999 9999999999999999999999888 7999999999999999999999999999999776 467788
Q ss_pred EeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeec
Q psy14906 289 IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGL 368 (583)
Q Consensus 289 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (583)
.+.+|.+.|.|+.|+| +..++++|+.|.++++||..++..++.+
T Consensus 530 ifaghlsDV~cv~FHP-Ns~Y~aTGSsD~tVRlWDv~~G~~VRiF----------------------------------- 573 (707)
T KOG0263|consen 530 IFAGHLSDVDCVSFHP-NSNYVATGSSDRTVRLWDVSTGNSVRIF----------------------------------- 573 (707)
T ss_pred hhcccccccceEEECC-cccccccCCCCceEEEEEcCCCcEEEEe-----------------------------------
Confidence 8999999999999998 7999999999999999999998765443
Q ss_pred ccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcccc
Q psy14906 369 AREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRG 448 (583)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~ 448 (583)
.+|..+|++++|||+|++|++|+.||.|.+||+.++..+.
T Consensus 574 ----------------------------------------~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~ 613 (707)
T KOG0263|consen 574 ----------------------------------------TGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVK 613 (707)
T ss_pred ----------------------------------------cCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchh
Confidence 1233789999999999999999999999999999999999
Q ss_pred ccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEE
Q psy14906 449 SYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNI 528 (583)
Q Consensus 449 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 528 (583)
.+ .+|.+.|.++.|+.+|..||+++.|.+|++||+... ....... ..+..++.+.-
T Consensus 614 ~l-----~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~--~~~~~~~-----------------~~~~~~~~~~~ 669 (707)
T KOG0263|consen 614 QL-----KGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV--IELLNLG-----------------HISTSNSAITQ 669 (707)
T ss_pred hh-----hcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh--ccccccc-----------------ccccccccccc
Confidence 99 899999999999999999999999999999999765 2210000 00000000000
Q ss_pred EEccccceEEeecccccceeeEEecCCCcEEEEE
Q psy14906 529 IDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITA 562 (583)
Q Consensus 529 ~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~ 562 (583)
=+-.+.-++..+.....+|.+|.|..-.-.|+.|
T Consensus 670 ~~~~~~~llgs~~tK~tpv~~l~FtrrNl~L~~g 703 (707)
T KOG0263|consen 670 ENNASSLLLGSFYTKNTPVVGLHFTRRNLLLAVG 703 (707)
T ss_pred cCCCCcceeeeeeecCceEEEEEEeccceeEEec
Confidence 0003344566666677789999998766445544
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-39 Score=268.50 Aligned_cols=300 Identities=16% Similarity=0.256 Sum_probs=261.5
Q ss_pred EeccceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCC
Q psy14906 97 WRRGIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVV 174 (583)
Q Consensus 97 w~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 174 (583)
|...-++.+.+.+|.+.|.|+ .|.++++++|+.|++|+|||+.+|+...++. +|...|..+++|+..
T Consensus 137 WHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~Lkltlt-----------Ghi~~vr~vavS~rH 205 (460)
T KOG0285|consen 137 WHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLT-----------GHIETVRGVAVSKRH 205 (460)
T ss_pred ccCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeec-----------chhheeeeeeecccC
Confidence 444456778889999999998 8889999999999999999999999999998 999999999999999
Q ss_pred CEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEE
Q psy14906 175 DIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGA 254 (583)
Q Consensus 175 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~ 254 (583)
.+|.+++.|+.|+.||++..+.++.+.+|-..|.|++..|.-+ +|++|+.|.+++|||+++...+..+ .+|..+|..+
T Consensus 206 pYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTld-vl~t~grDst~RvWDiRtr~~V~~l-~GH~~~V~~V 283 (460)
T KOG0285|consen 206 PYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLD-VLVTGGRDSTIRVWDIRTRASVHVL-SGHTNPVASV 283 (460)
T ss_pred ceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccce-eEEecCCcceEEEeeecccceEEEe-cCCCCcceeE
Confidence 9999999999999999999999999999999999999999988 9999999999999999999999999 8999999999
Q ss_pred EEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeec
Q psy14906 255 HFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLG 334 (583)
Q Consensus 255 ~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 334 (583)
.+.|-...+++|+.|++|++||+. .++...++..|...+.+++.+| ....+++++.| .|+-|++..+.....+.
T Consensus 284 ~~~~~dpqvit~S~D~tvrlWDl~----agkt~~tlt~hkksvral~lhP-~e~~fASas~d-nik~w~~p~g~f~~nls 357 (460)
T KOG0285|consen 284 MCQPTDPQVITGSHDSTVRLWDLR----AGKTMITLTHHKKSVRALCLHP-KENLFASASPD-NIKQWKLPEGEFLQNLS 357 (460)
T ss_pred EeecCCCceEEecCCceEEEeeec----cCceeEeeecccceeeEEecCC-chhhhhccCCc-cceeccCCccchhhccc
Confidence 999989999999999999999775 5678888999999999999998 67788888876 78999998876654331
Q ss_pred cchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCC
Q psy14906 335 IASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSK 414 (583)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (583)
.+..-
T Consensus 358 ---------------------------------------------------------------------------gh~~i 362 (460)
T KOG0285|consen 358 ---------------------------------------------------------------------------GHNAI 362 (460)
T ss_pred ---------------------------------------------------------------------------cccce
Confidence 11245
Q ss_pred ceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCC---CCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQ---PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
+.+++...|| ++++|+++|.+..||.++|...+....... -.....|.+.+|...|..|++|..|.+|++|.-+..
T Consensus 363 intl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe~ 441 (460)
T KOG0285|consen 363 INTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDEH 441 (460)
T ss_pred eeeeeeccCc-eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecccc
Confidence 6777777665 788899999999999998876665522211 234567999999999999999999999999976543
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-38 Score=264.06 Aligned_cols=282 Identities=16% Similarity=0.281 Sum_probs=253.2
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
+|.+.|.|+++.|-..++++|+.|++|+|||+.+|+...++.+|...|..+++++..+ ++++++.|+.|+.||++.++.
T Consensus 149 gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHp-YlFs~gedk~VKCwDLe~nkv 227 (460)
T KOG0285|consen 149 GHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHP-YLFSAGEDKQVKCWDLEYNKV 227 (460)
T ss_pred hccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCc-eEEEecCCCeeEEEechhhhh
Confidence 9999999999999999999999999999999999999999999999999999999999 899999999999999999999
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
++.+ .+|-..|.+++..|.-..|++|+.|.++++||+. ....+..+.||..+|.++.+.| ....+++|+.|++|
T Consensus 228 IR~Y-hGHlS~V~~L~lhPTldvl~t~grDst~RvWDiR----tr~~V~~l~GH~~~V~~V~~~~-~dpqvit~S~D~tv 301 (460)
T KOG0285|consen 228 IRHY-HGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIR----TRASVHVLSGHTNPVASVMCQP-TDPQVITGSHDSTV 301 (460)
T ss_pred HHHh-ccccceeEEEeccccceeEEecCCcceEEEeeec----ccceEEEecCCCCcceeEEeec-CCCceEEecCCceE
Confidence 9999 8999999999999999999999999999999876 4567889999999999999997 45689999999999
Q ss_pred EEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 320 RIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 320 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
++||+..++....+.
T Consensus 302 rlWDl~agkt~~tlt----------------------------------------------------------------- 316 (460)
T KOG0285|consen 302 RLWDLRAGKTMITLT----------------------------------------------------------------- 316 (460)
T ss_pred EEeeeccCceeEeee-----------------------------------------------------------------
Confidence 999999886544331
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN 479 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 479 (583)
.|...+.+++.+|....+++++.|. |+-|++..|..+..+ .+|..-|.+++...|+ ++++|++
T Consensus 317 ----------~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~~nl-----sgh~~iintl~~nsD~-v~~~G~d 379 (460)
T KOG0285|consen 317 ----------HHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQNL-----SGHNAIINTLSVNSDG-VLVSGGD 379 (460)
T ss_pred ----------cccceeeEEecCCchhhhhccCCcc-ceeccCCccchhhcc-----ccccceeeeeeeccCc-eEEEcCC
Confidence 1125689999999999999998887 999999999999887 8999999999998776 6888999
Q ss_pred CCcEEEEEccCCCCCceEEe---------eccCCeeeEEeccCCcEEEEEeCCceEEEEEcc
Q psy14906 480 DQTVKVWHFKQTGKPPLRSI---------KLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 480 dg~i~iwd~~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 532 (583)
+|.+..||.+++ ...+.. .....|.+.+|...|..|++|..|.+|++|.-+
T Consensus 380 ng~~~fwdwksg--~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 380 NGSIMFWDWKSG--HNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred ceEEEEEecCcC--cccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecc
Confidence 999999999987 333322 233478999999999999999999999999754
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-40 Score=272.57 Aligned_cols=231 Identities=22% Similarity=0.390 Sum_probs=209.3
Q ss_pred CCCCeEEEEee-CeEEEEEcCCeEEEEecc-ceeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeec
Q psy14906 72 HEDDITCLSSD-FFHIYTSANNIIYAWRRG-IDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSF 149 (583)
Q Consensus 72 h~~~v~~~~~~-~~~~~~~~~~~i~vw~~~-~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 149 (583)
....|.|+.+| +++++|..|++|+|||.+ ..+++.+.||++.|.|+..+.+.+++|+.|.+|++||+++|+++.++-
T Consensus 196 ~skgVYClQYDD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tli- 274 (499)
T KOG0281|consen 196 NSKGVYCLQYDDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLI- 274 (499)
T ss_pred cCCceEEEEecchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHh-
Confidence 56679999995 478888899999999975 578899999999999999999999999999999999999999999997
Q ss_pred cCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCce---eEEEeccCCCeEEEEEecCCCCEEEEEcCC
Q psy14906 150 DNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDES---LMEFIQTWGPVTALSFRTDGPPMMVSGSNT 226 (583)
Q Consensus 150 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 226 (583)
.|...|..+.|+ ..++++++.|.+|.+||+..... ...+.+|...|+.+.|+.. ++++++.|
T Consensus 275 ----------hHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~k---yIVsASgD 339 (499)
T KOG0281|consen 275 ----------HHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK---YIVSASGD 339 (499)
T ss_pred ----------hhcceeEEEEEe--CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccc---eEEEecCC
Confidence 999999999998 56999999999999999976542 3446799999999999654 89999999
Q ss_pred CcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC
Q psy14906 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306 (583)
Q Consensus 227 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 306 (583)
.+|++|++.++++++++ .+|...|-|+.+ .++++++|+.|.+|++|++. .+.+++.++||..-|.++.| |
T Consensus 340 RTikvW~~st~efvRtl-~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~----~G~cLRvLeGHEeLvRciRF---d 409 (499)
T KOG0281|consen 340 RTIKVWSTSTCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIE----CGACLRVLEGHEELVRCIRF---D 409 (499)
T ss_pred ceEEEEeccceeeehhh-hcccccceehhc--cCeEEEecCCCceEEEEecc----ccHHHHHHhchHHhhhheee---c
Confidence 99999999999999999 899999999888 68999999999999999776 78999999999999999999 5
Q ss_pred CCEEEEeeCCCcEEEEEccccc
Q psy14906 307 SDNILSAAGDSTLRIFNTKSET 328 (583)
Q Consensus 307 ~~~l~~~~~dg~i~iwd~~~~~ 328 (583)
.+.+++|+.||+|++||+..+.
T Consensus 410 ~krIVSGaYDGkikvWdl~aal 431 (499)
T KOG0281|consen 410 NKRIVSGAYDGKIKVWDLQAAL 431 (499)
T ss_pred CceeeeccccceEEEEeccccc
Confidence 6799999999999999997653
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-39 Score=279.75 Aligned_cols=293 Identities=17% Similarity=0.215 Sum_probs=250.4
Q ss_pred ceeeeeecccCccEEEE--cc-CCCEEEEEeCCCcEEEEEcCC-CcEEEEeeccCCceEEecccCCcceEEEeeCCCCCE
Q psy14906 101 IDIVGTYKGHTSPVHLI--LP-FGPHLISVDEESNVKVWDIKA-EETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDI 176 (583)
Q Consensus 101 ~~~~~~~~~h~~~v~~i--s~-~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 176 (583)
.+.+..+.||+..|+++ .| .+.+|++++.|+.|+||++-. +++++++. +|..+|..++|+++|..
T Consensus 204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~-----------gH~k~Vrd~~~s~~g~~ 272 (503)
T KOG0282|consen 204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFK-----------GHRKPVRDASFNNCGTS 272 (503)
T ss_pred HhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhh-----------cchhhhhhhhccccCCe
Confidence 34677889999999997 77 889999999999999999877 88999998 99999999999999999
Q ss_pred EEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEE
Q psy14906 177 IGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF 256 (583)
Q Consensus 177 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~ 256 (583)
+++++.|+.|++||+++|+++..|... ..++|+.|.|+++..+++|+.|+.|+.||+++++.++.+ ..|-+.|..+.|
T Consensus 273 fLS~sfD~~lKlwDtETG~~~~~f~~~-~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeY-d~hLg~i~~i~F 350 (503)
T KOG0282|consen 273 FLSASFDRFLKLWDTETGQVLSRFHLD-KVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEY-DRHLGAILDITF 350 (503)
T ss_pred eeeeecceeeeeeccccceEEEEEecC-CCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHH-HhhhhheeeeEE
Confidence 999999999999999999999999877 789999999999779999999999999999999999999 789999999999
Q ss_pred ecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccc
Q psy14906 257 LYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIA 336 (583)
Q Consensus 257 ~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 336 (583)
-++|+++++.+.|+++++|+.+.+- ..+.+.....| ...++..+| ++..++.-+.|..|.++.+...-....-
T Consensus 351 ~~~g~rFissSDdks~riWe~~~~v-~ik~i~~~~~h--smP~~~~~P-~~~~~~aQs~dN~i~ifs~~~~~r~nkk--- 423 (503)
T KOG0282|consen 351 VDEGRRFISSSDDKSVRIWENRIPV-PIKNIADPEMH--TMPCLTLHP-NGKWFAAQSMDNYIAIFSTVPPFRLNKK--- 423 (503)
T ss_pred ccCCceEeeeccCccEEEEEcCCCc-cchhhcchhhc--cCcceecCC-CCCeehhhccCceEEEEecccccccCHh---
Confidence 9999999999999999999765432 11222222233 456788887 7899999999999999986542211100
Q ss_pred hhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccC--CCC
Q psy14906 337 SANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAK--QSK 414 (583)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 414 (583)
....+| .+.
T Consensus 424 ---------------------------------------------------------------------K~feGh~vaGy 434 (503)
T KOG0282|consen 424 ---------------------------------------------------------------------KRFEGHSVAGY 434 (503)
T ss_pred ---------------------------------------------------------------------hhhcceeccCc
Confidence 000000 156
Q ss_pred ceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC-cEEEEeecCCcEEEEE
Q psy14906 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN-QIVISGGNDQTVKVWH 487 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd 487 (583)
...+.|||||++|++|+.+|.+.+||..+-+.+..+ .+|...+..+.|+|.. ..+|+|+.||.|++|+
T Consensus 435 s~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~l-----kah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 435 SCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKL-----KAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred eeeEEEcCCCCeEEeecCCccEEEeechhhhhhhcc-----ccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 678999999999999999999999999999999998 8999999999999965 5799999999999996
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=269.69 Aligned_cols=543 Identities=13% Similarity=0.150 Sum_probs=364.2
Q ss_pred ceeeeeeeeeee--cC--cccEEEEEeCCC--ceEEEEeeCCeEEEEecCC--cEEEeecCCCCCCeEEEEeeCeEEEE-
Q psy14906 18 IFLRHRALGYVS--NH--LPVVARFIRRRK--ETLFVTCVGKAFHVYGCNH--FKLLSVSPQHEDDITCLSSDFFHIYT- 88 (583)
Q Consensus 18 ~~~~~~~~g~~~--~~--~~~~~~~~p~~~--~~~i~~~~~~~i~v~d~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~- 88 (583)
+++|++.+-+.. ++ -..|+++.|+.+ ..++.+..|+.|++|-++. ...+..+++|...+.|+.-.....++
T Consensus 38 v~dp~k~~i~t~l~GH~a~VnC~~~l~~s~~~a~~vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~~~~cv~a~~~~~~~~ 117 (764)
T KOG1063|consen 38 VADPEKILIVTTLDGHVARVNCVHWLPTSEIVAEMVSGDSDGRVILWKLRDEYLIKIYTIQGHCKECVCVVARSSVMTCK 117 (764)
T ss_pred EeCcccceeEEeccCCccceEEEEEcccccccceEEEccCCCcEEEEEEeehheEEEEeecCcceeEEEEEeeeeEEEee
Confidence 677877643322 33 457888888765 2466677999999999983 55567788888888887754444444
Q ss_pred EcCCeEEEEeccc---------------------------------------------------eeeeeecccCccEEEE
Q psy14906 89 SANNIIYAWRRGI---------------------------------------------------DIVGTYKGHTSPVHLI 117 (583)
Q Consensus 89 ~~~~~i~vw~~~~---------------------------------------------------~~~~~~~~h~~~v~~i 117 (583)
+.|+++.+||.++ ..+..++||++.|.++
T Consensus 118 ~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl 197 (764)
T KOG1063|consen 118 AADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSL 197 (764)
T ss_pred ccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccchhhhhh
Confidence 6888999998621 1345567899999987
Q ss_pred --c-c--CCCEEEEEeCCCcEEEEEcCCCcEEE----E----eeccCCceEEe------------cccCCcceEEEeeCC
Q psy14906 118 --L-P--FGPHLISVDEESNVKVWDIKAEETYL----E----LSFDNDTFKIM------------GKRWNSCVNVLEPSP 172 (583)
Q Consensus 118 --s-~--~~~~l~s~~~dg~i~iwd~~~~~~~~----~----~~~~~~~~~~~------------~~~~~~~i~~~~~s~ 172 (583)
. + +.-+|||+++|..||||.+.-+.... + .......+... -.+|...|.++.|+|
T Consensus 198 ~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p 277 (764)
T KOG1063|consen 198 AFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHP 277 (764)
T ss_pred hhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEcc
Confidence 2 2 23489999999999999985432110 0 00000000000 149999999999999
Q ss_pred CCCEEEEEecCCeEEEEEccCCceeE-------EEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC---eehhh
Q psy14906 173 VVDIIGVGLSNKKIILHNILTDESLM-------EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR---QVENQ 242 (583)
Q Consensus 173 ~~~~l~~~~~d~~i~iw~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~---~~~~~ 242 (583)
.+..|++++.|.++.+|...+..-+. .+.+..+......|+|++. .+++-+..|..++|...+. .....
T Consensus 278 ~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~-~ii~~g~~Gg~hlWkt~d~~~w~~~~~ 356 (764)
T KOG1063|consen 278 EGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSN-VIIAHGRTGGFHLWKTKDKTFWTQEPV 356 (764)
T ss_pred chhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCC-EEEEecccCcEEEEeccCccceeeccc
Confidence 99999999999999999876542222 2223445688999999998 8888889999999983322 23344
Q ss_pred hhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEE
Q psy14906 243 IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322 (583)
Q Consensus 243 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 322 (583)
+ .||.+.|++++|.|.|.+|++.+.|.+-|+|---....+...+...+-|.-.++|++|.+ ....+++|..+..+|+|
T Consensus 357 i-SGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn-~~~~FVSgAdEKVlRvF 434 (764)
T KOG1063|consen 357 I-SGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVN-EDLQFVSGADEKVLRVF 434 (764)
T ss_pred c-ccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehcc-CCceeeecccceeeeee
Confidence 4 799999999999999999999999999999943212223344555667888999999985 46788899999999999
Q ss_pred Eccccccc----------e---eeccchhhh------hh----hhhhcchh--ccccc-------cCCCcc---------
Q psy14906 323 NTKSETSN----------K---NLGIASANR------NN----LKRKNRLE--KMNEK-------FILPPV--------- 361 (583)
Q Consensus 323 d~~~~~~~----------~---~~~~~~~~~------~~----~~~~~~~~--~~~~~-------~~~~~~--------- 361 (583)
+....-.. . .+......+ .. ....+... ..+.. +..||.
T Consensus 435 ~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tL 514 (764)
T KOG1063|consen 435 EAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTL 514 (764)
T ss_pred cCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhcc
Confidence 86532110 0 000000000 00 00000000 00000 000110
Q ss_pred ------------ceeeeecccccccccEEEEecC-----CceEEEeecCcccccceeeecccccccCCCCceEEEEccCC
Q psy14906 362 ------------SQFSFGLAREKDWNNIAAIHTG-----KNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCG 424 (583)
Q Consensus 362 ------------~~~~~~~~~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 424 (583)
..++... ....+++++... ...|++|+...-.... ....|.-.|+.++|||||
T Consensus 515 wPEv~KLYGHGyEv~~l~~---s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~-------~L~~HsLTVT~l~FSpdg 584 (764)
T KOG1063|consen 515 WPEVHKLYGHGYEVYALAI---SPTGNLIASACKSSLKEHAVIRLWNTANWLQVQ-------ELEGHSLTVTRLAFSPDG 584 (764)
T ss_pred chhhHHhccCceeEEEEEe---cCCCCEEeehhhhCCccceEEEEEeccchhhhh-------eecccceEEEEEEECCCC
Confidence 0000000 111344444332 3468888877654322 233455789999999999
Q ss_pred cEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCce---EEeec
Q psy14906 425 NFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPL---RSIKL 501 (583)
Q Consensus 425 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~---~~~~~ 501 (583)
++|++.+.|.++.+|........ .+.....+.|..-|.+..|+|++.+++|++.|++|++|.......+.+ ..+++
T Consensus 585 ~~LLsvsRDRt~sl~~~~~~~~~-e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~ 663 (764)
T KOG1063|consen 585 RYLLSVSRDRTVSLYEVQEDIKD-EFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKF 663 (764)
T ss_pred cEEEEeecCceEEeeeeecccch-hhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhcc
Confidence 99999999999999998543321 111122378999999999999999999999999999999877621222 44566
Q ss_pred cCCeeeEEecc-----CCcEEEEEeCCceEEEEEccccc------------eEEeecccccceeeEEecCC--------C
Q psy14906 502 DNGISFFRTHQ-----ESSMLAVCLDDFTVNIIDIDTCT------------IIRKLSGHMGQLTDADFSPD--------S 556 (583)
Q Consensus 502 ~~~v~~~~~s~-----~~~~l~~~~~dg~i~i~d~~~~~------------~~~~~~~h~~~v~~l~~s~d--------~ 556 (583)
...|+++++.| .+..+++|.+.|.|.+|...... .+....+|.+.|+.+.|+|. .
T Consensus 664 ~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~aV~rl~w~p~~~~~~~~~~ 743 (764)
T KOG1063|consen 664 SLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRKREHRQVTVGTFNLDTRLCATIGPDSAVNRLLWRPTCSDDWVEDK 743 (764)
T ss_pred CCceeeEEeeccccccccceEEEEecccEEEEEecccccccccceeeeeccccccccChHHhhheeEecccccccccccc
Confidence 78999999887 23378999999999999865111 11223357788999999974 2
Q ss_pred --cEEEEEeCCCeEEEEeCC
Q psy14906 557 --RWLITASMDCTIRVWDIP 574 (583)
Q Consensus 557 --~~l~s~~~d~~i~vw~~~ 574 (583)
..|++|+.|..++++++.
T Consensus 744 ~~l~la~~g~D~~vri~nv~ 763 (764)
T KOG1063|consen 744 EWLNLAVGGDDESVRIFNVD 763 (764)
T ss_pred ceeEEeeecccceeEEeecc
Confidence 346999999999999875
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=287.01 Aligned_cols=341 Identities=17% Similarity=0.254 Sum_probs=280.6
Q ss_pred cCCCCCCeEEEEeeC---eEEEEEcCCeEEEEec-cceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCc
Q psy14906 69 SPQHEDDITCLSSDF---FHIYTSANNIIYAWRR-GIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEE 142 (583)
Q Consensus 69 ~~~h~~~v~~~~~~~---~~~~~~~~~~i~vw~~-~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~ 142 (583)
+.....+|-.++|+| .++++-..|.|++||. -+.++..|.+|+++|..+ +|++..++||++|-.|++|+..+.+
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rr 84 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRR 84 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccce
Confidence 444566778888865 5777779999999996 467889999999999987 9999999999999999999999999
Q ss_pred EEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEE
Q psy14906 143 TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222 (583)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 222 (583)
++.++. +|...|+.+.|++.-.++++++.|.+|+|||+.+++++..+.+|..-|.|..|+|... ++++
T Consensus 85 clftL~-----------GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptED-lIVS 152 (1202)
T KOG0292|consen 85 CLFTLL-----------GHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTED-LIVS 152 (1202)
T ss_pred ehhhhc-----------cccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccc-eEEE
Confidence 999998 9999999999999999999999999999999999999999999999999999999887 9999
Q ss_pred EcCCCcEEEEeCCCCe----------------------------ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEE
Q psy14906 223 GSNTGHLTVWNLEDRQ----------------------------VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKL 274 (583)
Q Consensus 223 ~~~dg~i~vwd~~~~~----------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~ 274 (583)
++-|.+|||||+..-+ .++.+..||...|+.++|+|.-.+|++|+.|+.|++
T Consensus 153 aSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKl 232 (1202)
T KOG0292|consen 153 ASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKL 232 (1202)
T ss_pred ecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeE
Confidence 9999999999985211 122233789999999999999999999999999999
Q ss_pred EEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcccc
Q psy14906 275 WIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNE 354 (583)
Q Consensus 275 w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (583)
|.++.. ..-.+.+.++|...|.++.|+| ..+.+++.+.|++|++||+.....++.+....
T Consensus 233 Wrmnet--KaWEvDtcrgH~nnVssvlfhp-~q~lIlSnsEDksirVwDm~kRt~v~tfrren----------------- 292 (1202)
T KOG0292|consen 233 WRMNET--KAWEVDTCRGHYNNVSSVLFHP-HQDLILSNSEDKSIRVWDMTKRTSVQTFRREN----------------- 292 (1202)
T ss_pred EEeccc--cceeehhhhcccCCcceEEecC-ccceeEecCCCccEEEEecccccceeeeeccC-----------------
Confidence 976543 5566788999999999999998 67899999999999999999887766553221
Q ss_pred ccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCc
Q psy14906 355 KFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434 (583)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 434 (583)
.+...++.+|..+++++|...|
T Consensus 293 ----------------------------------------------------------dRFW~laahP~lNLfAAgHDsG 314 (1202)
T KOG0292|consen 293 ----------------------------------------------------------DRFWILAAHPELNLFAAGHDSG 314 (1202)
T ss_pred ----------------------------------------------------------CeEEEEEecCCcceeeeecCCc
Confidence 4678899999999999887666
Q ss_pred eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc----CCeeeEEe
Q psy14906 435 HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD----NGISFFRT 510 (583)
Q Consensus 435 ~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~~v~~~~~ 510 (583)
+.+|.++...+ +.++ +++.|...- |..|+-+|+.+.....+..+++. .++.++.+
T Consensus 315 -m~VFkleRErp---------------a~~v----~~n~LfYvk-d~~i~~~d~~t~~d~~v~~lr~~g~~~~~~~smsY 373 (1202)
T KOG0292|consen 315 -MIVFKLERERP---------------AYAV----NGNGLFYVK-DRFIRSYDLRTQKDTAVASLRRPGTLWQPPRSLSY 373 (1202)
T ss_pred -eEEEEEcccCc---------------eEEE----cCCEEEEEc-cceEEeeeccccccceeEeccCCCcccCCcceeee
Confidence 66776543222 2222 233444443 88999999988644455555554 47888999
Q ss_pred ccCCcEEEEE
Q psy14906 511 HQESSMLAVC 520 (583)
Q Consensus 511 s~~~~~l~~~ 520 (583)
+|....+..+
T Consensus 374 Npae~~vlic 383 (1202)
T KOG0292|consen 374 NPAENAVLIC 383 (1202)
T ss_pred ccccCeEEEE
Confidence 9876644444
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=268.79 Aligned_cols=288 Identities=17% Similarity=0.269 Sum_probs=240.7
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc---eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE---SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED 236 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 236 (583)
.|...|+.+.||++|++||+++.|.+..+|.+.... ..+++.+|..+|..+.||||.+ +|++++.+..+.+||..+
T Consensus 222 ~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdr-yLlaCg~~e~~~lwDv~t 300 (519)
T KOG0293|consen 222 DHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDR-YLLACGFDEVLSLWDVDT 300 (519)
T ss_pred hCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCC-eEEecCchHheeeccCCc
Confidence 899999999999999999999999999999986554 4778889999999999999999 778888888899999999
Q ss_pred CeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC-CCCCeeEEEeeCCCCEEEEeeC
Q psy14906 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH-SAPPNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 237 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~ 315 (583)
|.+...+..+|...+.+++|.|||..+++|+.|+.+..|++|. ..+...++- ...|.+++..+ ||+++++.+.
T Consensus 301 gd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDg-----n~~~~W~gvr~~~v~dlait~-Dgk~vl~v~~ 374 (519)
T KOG0293|consen 301 GDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDG-----NILGNWEGVRDPKVHDLAITY-DGKYVLLVTV 374 (519)
T ss_pred chhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCc-----chhhcccccccceeEEEEEcC-CCcEEEEEec
Confidence 9999999777778999999999999999999999999998753 333333332 24588999996 8999999999
Q ss_pred CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcc
Q psy14906 316 DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKS 395 (583)
Q Consensus 316 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 395 (583)
|..|++++.++......+.
T Consensus 375 d~~i~l~~~e~~~dr~lis------------------------------------------------------------- 393 (519)
T KOG0293|consen 375 DKKIRLYNREARVDRGLIS------------------------------------------------------------- 393 (519)
T ss_pred ccceeeechhhhhhhcccc-------------------------------------------------------------
Confidence 9999999987654321110
Q ss_pred cccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEE
Q psy14906 396 KMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI 475 (583)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 475 (583)
...+++++++|.|++++++.-.+..+++||++....+..+ .+|. .+.+++
T Consensus 394 ---------------e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY-----~Ghk----------q~~fiI 443 (519)
T KOG0293|consen 394 ---------------EEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKY-----FGHK----------QGHFII 443 (519)
T ss_pred ---------------ccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHh-----hccc----------ccceEE
Confidence 0157999999999999999999999999999988888777 6765 344443
Q ss_pred EeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCC
Q psy14906 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPD 555 (583)
Q Consensus 476 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d 555 (583)
-.+-.| .+..++|+|++|+.|+||+..+|+++.++.||...|++++|+|.
T Consensus 444 rSCFgg------------------------------~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~ 493 (519)
T KOG0293|consen 444 RSCFGG------------------------------GNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPA 493 (519)
T ss_pred EeccCC------------------------------CCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCC
Confidence 222211 14568999999999999999999999999999999999999994
Q ss_pred -CcEEEEEeCCCeEEEEeCCC
Q psy14906 556 -SRWLITASMDCTIRVWDIPS 575 (583)
Q Consensus 556 -~~~l~s~~~d~~i~vw~~~~ 575 (583)
-.++|++|.||+|+||....
T Consensus 494 ~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 494 DPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred CHHHhhccCCCCeEEEecCCc
Confidence 56789999999999998764
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=277.43 Aligned_cols=439 Identities=14% Similarity=0.153 Sum_probs=303.9
Q ss_pred EEEEEcCCeEEEEeccc-eeeeeecccCccEEEE--ccCCCEEEEEe--CCCcEEEEEcCCCcEEEEeeccCCceEEecc
Q psy14906 85 HIYTSANNIIYAWRRGI-DIVGTYKGHTSPVHLI--LPFGPHLISVD--EESNVKVWDIKAEETYLELSFDNDTFKIMGK 159 (583)
Q Consensus 85 ~~~~~~~~~i~vw~~~~-~~~~~~~~h~~~v~~i--s~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 159 (583)
+++--.+..|.+|+... ..-..+..|..+++++ |++|+|+|+|- ....+++|++.....+.++.
T Consensus 51 l~aYpAGCvVVlfn~~~~tQ~hlvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~vVAEfv----------- 119 (1080)
T KOG1408|consen 51 LCAYPAGCVVVLFNVDSCTQSHLVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGVVAEFV----------- 119 (1080)
T ss_pred ceeeccCcEEEEEcccccchhheecccCcceeEEEEcCCCcEEEecccCCCccceeeeeccccchhhhh-----------
Confidence 34444567899999754 4455567888899987 99999999974 56789999999988888887
Q ss_pred cCCcceEEEeeCCCCCEEEEEecC--C----------------------------------------eEEEEEccCCcee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSN--K----------------------------------------KIILHNILTDESL 197 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d--~----------------------------------------~i~iw~~~~~~~~ 197 (583)
.|...++|++|+|.++++++.+.. - .|++|.++.++..
T Consensus 120 dHKY~vtcvaFsp~~kyvvSVGsQHDMIVnv~dWr~N~~~asnkiss~Vsav~fsEdgSYfvT~gnrHvk~wyl~~~~Ky 199 (1080)
T KOG1408|consen 120 DHKYNVTCVAFSPGNKYVVSVGSQHDMIVNVNDWRVNSSGASNKISSVVSAVAFSEDGSYFVTSGNRHVKLWYLQIQSKY 199 (1080)
T ss_pred hccccceeeeecCCCcEEEeeccccceEEEhhhhhhcccccccccceeEEEEEEccCCceeeeeeeeeEEEEEeeccccc
Confidence 999999999999999999865422 2 3444444332210
Q ss_pred EE-------------Ee------------------------cc-----------------CCCeEEEEEecCCCCEEEEE
Q psy14906 198 ME-------------FI------------------------QT-----------------WGPVTALSFRTDGPPMMVSG 223 (583)
Q Consensus 198 ~~-------------~~------------------------~~-----------------~~~v~~~~~~~~~~~~l~s~ 223 (583)
.. ++ +| +....||+.+. + ++++|
T Consensus 200 kdpiPl~gRs~~lg~lr~n~f~avaCg~gicAestfait~qGhLvEFSsRRLLDKWVqcRTTnAnCIcVs~--r-~I~cg 276 (1080)
T KOG1408|consen 200 KDPIPLPGRSYFLGNLRFNEFLAVACGVGICAESTFAITAQGHLVEFSSRRLLDKWVQCRTTNANCICVSS--R-LIACG 276 (1080)
T ss_pred cCCccccchhhhccccccchhhhhhhcCcccccceEEEecccceeeechhhhhhhhhhhhccccceeeeec--c-eEEEe
Confidence 00 00 00 01112333332 2 78899
Q ss_pred cCCCcEEEEeCCCCeehhhhhhccc-----------------------cceEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q psy14906 224 SNTGHLTVWNLEDRQVENQIKKAHR-----------------------KVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA 280 (583)
Q Consensus 224 ~~dg~i~vwd~~~~~~~~~~~~~~~-----------------------~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~ 280 (583)
+.+|.|++|+.++-..+.++...|. -...++.|++....|.+.-.|..+.+||++..
T Consensus 277 Ca~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYvWDvrD~ 356 (1080)
T KOG1408|consen 277 CAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYVWDVRDV 356 (1080)
T ss_pred eccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCceEEEEecccc
Confidence 9999999998877655555433331 12346778888899999999999999988765
Q ss_pred CCCceeeEEeccCCCCCeeEEEeeCC----------CCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchh
Q psy14906 281 DGNGRLLRIREGHSAPPNYIQFYGNS----------SDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLE 350 (583)
Q Consensus 281 ~~~~~~~~~~~~~~~~v~~~~~~~~~----------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (583)
...++... +-.|..-|..+.-.|-+ ...+++++.|++|++||+..+.....+...-.....
T Consensus 357 ~kvgk~~s-~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l-------- 427 (1080)
T KOG1408|consen 357 NKVGKCSS-MLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANL-------- 427 (1080)
T ss_pred ccccceee-eeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhh--------
Confidence 54444433 34477777766655411 245899999999999999875544433221110000
Q ss_pred ccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEE
Q psy14906 351 KMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIG 430 (583)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 430 (583)
+-....++...+............ ....-.....+.+++++|+|++|++|
T Consensus 428 ---------------------------~ki~y~d~~~q~~~d~~~~~fdka---~~s~~d~r~G~R~~~vSp~gqhLAsG 477 (1080)
T KOG1408|consen 428 ---------------------------SKIPYEDSTQQIMHDASAGIFDKA---LVSTCDSRFGFRALAVSPDGQHLASG 477 (1080)
T ss_pred ---------------------------hcCccccCchhhhhhccCCccccc---chhhcCcccceEEEEECCCcceeccc
Confidence 000000000000000000000000 00000112579999999999999999
Q ss_pred ecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC---CCcEEEEeecCCcEEEEEccCCCCCceEEeec------
Q psy14906 431 YSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN---LNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL------ 501 (583)
Q Consensus 431 ~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------ 501 (583)
..-|.+++|++..-+....+ .+|...|.|+.|+. ..++||+++.|.-|.|||...+. .++.++..
T Consensus 478 Dr~GnlrVy~Lq~l~~~~~~-----eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny-~l~qtld~HSssIT 551 (1080)
T KOG1408|consen 478 DRGGNLRVYDLQELEYTCFM-----EAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNY-DLVQTLDGHSSSIT 551 (1080)
T ss_pred CccCceEEEEehhhhhhhhe-----ecccceeEEEeecCchhhhHhhhhccCCceEEEEeccccc-chhhhhccccccee
Confidence 99999999999998888877 89999999999985 34789999999999999987543 11111111
Q ss_pred --------------------------------------------cCCeeeEEeccCCcEEEEEeCCceEEEEEccccceE
Q psy14906 502 --------------------------------------------DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTII 537 (583)
Q Consensus 502 --------------------------------------------~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 537 (583)
+..+..++..|..+++++++.|..|+|||+++++..
T Consensus 552 svKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~ 631 (1080)
T KOG1408|consen 552 SVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQV 631 (1080)
T ss_pred EEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEecccccee
Confidence 123556777888899999999999999999999999
Q ss_pred Eeecc---cccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 538 RKLSG---HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 538 ~~~~~---h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
+.+++ |.+....+...|.|-|||+.+.|.++.++|+-+|++++.+
T Consensus 632 k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m 679 (1080)
T KOG1408|consen 632 KSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQM 679 (1080)
T ss_pred eeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhh
Confidence 99885 5677888999999999999999999999999999998754
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=252.41 Aligned_cols=286 Identities=21% Similarity=0.285 Sum_probs=253.6
Q ss_pred cCCcceEEEeeCC---CCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q psy14906 160 RWNSCVNVLEPSP---VVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED 236 (583)
Q Consensus 160 ~~~~~i~~~~~s~---~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 236 (583)
+|..+|..++||| +|-+|++++.|+.=.+-+-++|.-+.+|.+|++.|++...+.+.. ..++++.|-+-++||.-+
T Consensus 12 ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~-~aasaaadftakvw~a~t 90 (334)
T KOG0278|consen 12 GHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNAT-RAASAAADFTAKVWDAVT 90 (334)
T ss_pred CCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhh-hhhhhcccchhhhhhhhh
Confidence 8999999999985 888999999999999999999999999999999999999998887 789999999999999999
Q ss_pred CeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC
Q psy14906 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD 316 (583)
Q Consensus 237 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 316 (583)
|..+.++ .|..-|.+++|+.|.++|++|+.+..+|+||++.+. .+...+.+|.+.|..+.|.. ..+.+++.+.|
T Consensus 91 gdelhsf--~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~---App~E~~ghtg~Ir~v~wc~-eD~~iLSSadd 164 (334)
T KOG0278|consen 91 GDELHSF--EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK---APPKEISGHTGGIRTVLWCH-EDKCILSSADD 164 (334)
T ss_pred hhhhhhh--hhhheeeeEEecccchhhhccchHHHhhhhhccCCC---CCchhhcCCCCcceeEEEec-cCceEEeeccC
Confidence 9999999 689999999999999999999999999999877543 34456789999999999996 56778888999
Q ss_pred CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccc
Q psy14906 317 STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSK 396 (583)
Q Consensus 317 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 396 (583)
++|++||.+++...+.+
T Consensus 165 ~tVRLWD~rTgt~v~sL--------------------------------------------------------------- 181 (334)
T KOG0278|consen 165 KTVRLWDHRTGTEVQSL--------------------------------------------------------------- 181 (334)
T ss_pred CceEEEEeccCcEEEEE---------------------------------------------------------------
Confidence 99999998887554432
Q ss_pred ccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEE
Q psy14906 397 MDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476 (583)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 476 (583)
.-..+|+++.++++|++|.+
T Consensus 182 ------------------------------------------------------------~~~s~VtSlEvs~dG~ilTi 201 (334)
T KOG0278|consen 182 ------------------------------------------------------------EFNSPVTSLEVSQDGRILTI 201 (334)
T ss_pred ------------------------------------------------------------ecCCCCcceeeccCCCEEEE
Confidence 12345777888888876655
Q ss_pred eecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEee-cccccceeeEEecCC
Q psy14906 477 GGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKL-SGHMGQLTDADFSPD 555 (583)
Q Consensus 477 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~h~~~v~~l~~s~d 555 (583)
+ ..+.|++||..+. .+++.++.+..|.+..++|+...+++|++|..++.||..+++.+..+ ++|.++|.|+.|+||
T Consensus 202 a-~gssV~Fwdaksf--~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPd 278 (334)
T KOG0278|consen 202 A-YGSSVKFWDAKSF--GLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPD 278 (334)
T ss_pred e-cCceeEEeccccc--cceeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCC
Confidence 4 4567999999998 89999999999999999999999999999999999999999999886 899999999999999
Q ss_pred CcEEEEEeCCCeEEEEeCCCccc
Q psy14906 556 SRWLITASMDCTIRVWDIPSSQL 578 (583)
Q Consensus 556 ~~~l~s~~~d~~i~vw~~~~~~~ 578 (583)
|...|+||+||+|++|.+..++.
T Consensus 279 GE~yAsGSEDGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 279 GELYASGSEDGTIRLWQTTPGKT 301 (334)
T ss_pred CceeeccCCCceEEEEEecCCCc
Confidence 99999999999999999877654
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-39 Score=267.06 Aligned_cols=275 Identities=18% Similarity=0.280 Sum_probs=238.7
Q ss_pred cCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeCe-EEEEEcCCeEEEEec-cceeeeee
Q psy14906 30 NHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFF-HIYTSANNIIYAWRR-GIDIVGTY 107 (583)
Q Consensus 30 ~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~~~~~~i~vw~~-~~~~~~~~ 107 (583)
.+-..|++| | ++.++.+..|++|.|||.++..+++.+.||.+.|.|+.+|.+ +++|+.|.+|+|||. ++++++++
T Consensus 197 skgVYClQY--D-D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tl 273 (499)
T KOG0281|consen 197 SKGVYCLQY--D-DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTL 273 (499)
T ss_pred CCceEEEEe--c-chhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHH
Confidence 455678888 3 455666779999999999999999999999999999999886 556679999999996 57899999
Q ss_pred cccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcE---EEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCC
Q psy14906 108 KGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEET---YLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNK 184 (583)
Q Consensus 108 ~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~ 184 (583)
-+|...|..+--...++++++.|.++.+||+..... ...+. +|...|+.+.|+ .+++++++.|.
T Consensus 274 ihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLv-----------GHrAaVNvVdfd--~kyIVsASgDR 340 (499)
T KOG0281|consen 274 IHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLV-----------GHRAAVNVVDFD--DKYIVSASGDR 340 (499)
T ss_pred hhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHh-----------hhhhheeeeccc--cceEEEecCCc
Confidence 999999999988888999999999999999987542 22333 999999999997 45999999999
Q ss_pred eEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEE
Q psy14906 185 KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264 (583)
Q Consensus 185 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 264 (583)
+|++|+..+++.++++.+|...|-|+.+. ++ ++++|+.|.+|++||++.|.+++.+ .||+.-|.++.| |.+.++
T Consensus 341 TikvW~~st~efvRtl~gHkRGIAClQYr--~r-lvVSGSSDntIRlwdi~~G~cLRvL-eGHEeLvRciRF--d~krIV 414 (499)
T KOG0281|consen 341 TIKVWSTSTCEFVRTLNGHKRGIACLQYR--DR-LVVSGSSDNTIRLWDIECGACLRVL-EGHEELVRCIRF--DNKRIV 414 (499)
T ss_pred eEEEEeccceeeehhhhcccccceehhcc--Ce-EEEecCCCceEEEEeccccHHHHHH-hchHHhhhheee--cCceee
Confidence 99999999999999999999999998885 45 9999999999999999999999999 899999999999 567899
Q ss_pred EEeCCCeEEEEEccCCCCC-----ceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccccc
Q psy14906 265 TSSPDNTLKLWIFDKADGN-----GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETS 329 (583)
Q Consensus 265 s~~~d~~i~~w~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 329 (583)
+|+.||.|++||+...... .-++..+..|++.|..+.| |...+++++.|.+|.+||..++..
T Consensus 415 SGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF---D~fqIvsssHddtILiWdFl~~~~ 481 (499)
T KOG0281|consen 415 SGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF---DEFQIISSSHDDTILIWDFLNGPP 481 (499)
T ss_pred eccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee---cceEEEeccCCCeEEEEEcCCCCc
Confidence 9999999999988654221 2245566779999999999 567899999999999999877643
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=277.14 Aligned_cols=282 Identities=26% Similarity=0.446 Sum_probs=242.8
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
+|..+|.+++|+|++++|++++.+|.+++|++.+++....+..|...+..+.|+|+++ .+++++.+|.+++||+.+++.
T Consensus 7 ~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~~~~i~i~~~~~~~~ 85 (289)
T cd00200 7 GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGT-YLASGSSDKTIRLWDLETGEC 85 (289)
T ss_pred ccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCC-EEEEEcCCCeEEEEEcCcccc
Confidence 7899999999999999999999999999999999988888899989999999999997 899999999999999998877
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
...+ ..|...+.++.|+++++++++++.++.+.+|++. ..+....+..|...+.++.|+| ++.++++++.++.+
T Consensus 86 ~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i 159 (289)
T cd00200 86 VRTL-TGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVE----TGKCLTTLRGHTDWVNSVAFSP-DGTFVASSSQDGTI 159 (289)
T ss_pred eEEE-eccCCcEEEEEEcCCCCEEEEecCCCeEEEEECC----CcEEEEEeccCCCcEEEEEEcC-cCCEEEEEcCCCcE
Confidence 7777 6888899999999999899988889999999765 3455666667777788888876 46666666667777
Q ss_pred EEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 320 RIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 320 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
++||+.++
T Consensus 160 ~i~d~~~~------------------------------------------------------------------------ 167 (289)
T cd00200 160 KLWDLRTG------------------------------------------------------------------------ 167 (289)
T ss_pred EEEEcccc------------------------------------------------------------------------
Confidence 77776432
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN 479 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 479 (583)
+....+ ..|...+.++.|+|+++.+++++.
T Consensus 168 ---------------------------------------------~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~ 197 (289)
T cd00200 168 ---------------------------------------------KCVATL-----TGHTGEVNSVAFSPDGEKLLSSSS 197 (289)
T ss_pred ---------------------------------------------ccceeE-----ecCccccceEEECCCcCEEEEecC
Confidence 222222 356677899999999988888888
Q ss_pred CCcEEEEEccCCCCCceEEe-eccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcE
Q psy14906 480 DQTVKVWHFKQTGKPPLRSI-KLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558 (583)
Q Consensus 480 dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~ 558 (583)
|+.+++||+... +.+..+ .+...+.++.|+|++.++++++.++.|++||+.+++....+..|...|.+++|+|++++
T Consensus 198 ~~~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 275 (289)
T cd00200 198 DGTIKLWDLSTG--KCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKR 275 (289)
T ss_pred CCcEEEEECCCC--ceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCE
Confidence 999999999877 677666 55668999999999889999888999999999999999999999999999999999999
Q ss_pred EEEEeCCCeEEEEe
Q psy14906 559 LITASMDCTIRVWD 572 (583)
Q Consensus 559 l~s~~~d~~i~vw~ 572 (583)
|++++.|+.+++|+
T Consensus 276 l~~~~~d~~i~iw~ 289 (289)
T cd00200 276 LASGSADGTIRIWD 289 (289)
T ss_pred EEEecCCCeEEecC
Confidence 99999999999996
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=291.51 Aligned_cols=288 Identities=22% Similarity=0.328 Sum_probs=250.3
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc--eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC-CC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE--SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL-ED 236 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~-~~ 236 (583)
.+...|.++.|+++|+.+++++.++.+++|+..+.+ ....+.+|...|..++|+|+++ ++++++.|++|++||+ ..
T Consensus 157 ~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~-~l~s~s~D~tiriwd~~~~ 235 (456)
T KOG0266|consen 157 HECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGS-YLLSGSDDKTLRIWDLKDD 235 (456)
T ss_pred cccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCc-EEEEecCCceEEEeeccCC
Confidence 347899999999999999999999999999998777 7777889999999999999999 9999999999999999 55
Q ss_pred CeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC
Q psy14906 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD 316 (583)
Q Consensus 237 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 316 (583)
+..++++ .+|...|++++|+|+++++++|+.|++|++||+. .+.+...+.+|...|.+++|++ ++..|++++.|
T Consensus 236 ~~~~~~l-~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~----~~~~~~~l~~hs~~is~~~f~~-d~~~l~s~s~d 309 (456)
T KOG0266|consen 236 GRNLKTL-KGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVR----TGECVRKLKGHSDGISGLAFSP-DGNLLVSASYD 309 (456)
T ss_pred CeEEEEe-cCCCCceEEEEecCCCCEEEEecCCCcEEEEecc----CCeEEEeeeccCCceEEEEECC-CCCEEEEcCCC
Confidence 6888999 7999999999999999999999999999999775 4789999999999999999997 89999999999
Q ss_pred CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccc
Q psy14906 317 STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSK 396 (583)
Q Consensus 317 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 396 (583)
+.|++||+.++...
T Consensus 310 ~~i~vwd~~~~~~~------------------------------------------------------------------ 323 (456)
T KOG0266|consen 310 GTIRVWDLETGSKL------------------------------------------------------------------ 323 (456)
T ss_pred ccEEEEECCCCcee------------------------------------------------------------------
Confidence 99999998875410
Q ss_pred ccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEE
Q psy14906 397 MDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476 (583)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 476 (583)
+...+... .... .++++.|+|+++++++
T Consensus 324 -------------------------------------------------~~~~~~~~--~~~~-~~~~~~fsp~~~~ll~ 351 (456)
T KOG0266|consen 324 -------------------------------------------------CLKLLSGA--ENSA-PVTSVQFSPNGKYLLS 351 (456)
T ss_pred -------------------------------------------------eeecccCC--CCCC-ceeEEEECCCCcEEEE
Confidence 00011000 1223 6999999999999999
Q ss_pred eecCCcEEEEEccCCCCCceEEeecc-C---CeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeeccc-ccceeeEE
Q psy14906 477 GGNDQTVKVWHFKQTGKPPLRSIKLD-N---GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGH-MGQLTDAD 551 (583)
Q Consensus 477 ~~~dg~i~iwd~~~~~~~~~~~~~~~-~---~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h-~~~v~~l~ 551 (583)
+..|+.+++||+... ........+ . .+.+...++.++++++|+.|+.|++||+.++..+..+.+| ...+..+.
T Consensus 352 ~~~d~~~~~w~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~ 429 (456)
T KOG0266|consen 352 ASLDRTLKLWDLRSG--KSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLS 429 (456)
T ss_pred ecCCCeEEEEEccCC--cceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccc
Confidence 999999999999988 666665543 2 3444566789999999999999999999999999999999 89999999
Q ss_pred ecCCCcEEEEEe--CCCeEEEEeCC
Q psy14906 552 FSPDSRWLITAS--MDCTIRVWDIP 574 (583)
Q Consensus 552 ~s~d~~~l~s~~--~d~~i~vw~~~ 574 (583)
++|..+++++++ .|+.+++|..+
T Consensus 430 ~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 430 SHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred cCCCcCeeeecCcCCCceEEEecCC
Confidence 999999999998 78999999764
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=283.96 Aligned_cols=278 Identities=17% Similarity=0.219 Sum_probs=234.9
Q ss_pred eecCCCCCCeEEEEe--eCeEEEEE-cCCeEEEEeccceeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcE
Q psy14906 67 SVSPQHEDDITCLSS--DFFHIYTS-ANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEET 143 (583)
Q Consensus 67 ~~~~~h~~~v~~~~~--~~~~~~~~-~~~~i~vw~~~~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~ 143 (583)
+++......++|..| |+.+++++ .|..|++|.+....++.+++-..- ..+=+.+.|-.+.+-|-.+...
T Consensus 372 YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l--------~~~d~~sad~~~~~~D~~~~~~ 443 (707)
T KOG0263|consen 372 YTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDL--------SNIDTESADVDVDMLDDDSSGT 443 (707)
T ss_pred EEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhh--------ccccccccchhhhhccccCCce
Confidence 344445667788888 44555555 788999999876655555532211 1122334455567777777666
Q ss_pred EEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEE
Q psy14906 144 YLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG 223 (583)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 223 (583)
..++- +|.++|..+.|+|+.++|+++++|+++++|.+.+...+..+++|..+|+.+.|+|.|- ++|++
T Consensus 444 ~~~L~-----------GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~Gy-YFata 511 (707)
T KOG0263|consen 444 SRTLY-----------GHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGY-YFATA 511 (707)
T ss_pred eEEee-----------cCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCce-EEEec
Confidence 66676 9999999999999999999999999999999999999999999999999999999997 89999
Q ss_pred cCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEe
Q psy14906 224 SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY 303 (583)
Q Consensus 224 ~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 303 (583)
+.|++-++|.....++++.+ .+|-+.|.|+.|+|+.+++++||.|.++++||+. .+..++.+.||.++|.+++|+
T Consensus 512 s~D~tArLWs~d~~~PlRif-aghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~----~G~~VRiF~GH~~~V~al~~S 586 (707)
T KOG0263|consen 512 SHDQTARLWSTDHNKPLRIF-AGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVS----TGNSVRIFTGHKGPVTALAFS 586 (707)
T ss_pred CCCceeeeeecccCCchhhh-cccccccceEEECCcccccccCCCCceEEEEEcC----CCcEEEEecCCCCceEEEEEc
Confidence 99999999999999999999 8999999999999999999999999999999775 677899999999999999999
Q ss_pred eCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecC
Q psy14906 304 GNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTG 383 (583)
Q Consensus 304 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (583)
| +|.+|++|+.||.|.+||+.++..+..+.
T Consensus 587 p-~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~------------------------------------------------- 616 (707)
T KOG0263|consen 587 P-CGRYLASGDEDGLIKIWDLANGSLVKQLK------------------------------------------------- 616 (707)
T ss_pred C-CCceEeecccCCcEEEEEcCCCcchhhhh-------------------------------------------------
Confidence 8 89999999999999999999987665441
Q ss_pred CceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCc
Q psy14906 384 KNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGA 445 (583)
Q Consensus 384 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 445 (583)
.|.+.+.++.|+.+|..|++|+.|.+|++||+..-.
T Consensus 617 --------------------------~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~ 652 (707)
T KOG0263|consen 617 --------------------------GHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVI 652 (707)
T ss_pred --------------------------cccCceeEEEEecCCCEEEecCCCCeEEEEEchhhc
Confidence 112679999999999999999999999999987533
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=275.67 Aligned_cols=286 Identities=23% Similarity=0.409 Sum_probs=252.2
Q ss_pred eeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe
Q psy14906 104 VGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL 181 (583)
Q Consensus 104 ~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 181 (583)
++++++|..+|+++ +|++++|++++.||.|++|++.+++....+. .|...+..+.|+|+++.|++++
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~-----------~~~~~i~~~~~~~~~~~l~~~~ 70 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLK-----------GHTGPVRDVAASADGTYLASGS 70 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEe-----------cCCcceeEEEECCCCCEEEEEc
Confidence 35678999999998 8999999999999999999999988777776 8888999999999999999999
Q ss_pred cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCC
Q psy14906 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEP 261 (583)
Q Consensus 182 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 261 (583)
.+|.|++|++.+++.+..+..|...+.++.|+|+++ ++++++.++.+.+||+.+++....+ ..|...+.+++|+|++.
T Consensus 71 ~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~ 148 (289)
T cd00200 71 SDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGR-ILSSSSRDKTIKVWDVETGKCLTTL-RGHTDWVNSVAFSPDGT 148 (289)
T ss_pred CCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCC-EEEEecCCCeEEEEECCCcEEEEEe-ccCCCcEEEEEEcCcCC
Confidence 999999999998888899999988999999999977 8888888999999999988888888 68899999999999999
Q ss_pred EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhh
Q psy14906 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341 (583)
Q Consensus 262 ~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 341 (583)
++++++.++.+++|++. ..+....+..|...+.++.|+| +++.+++++.++.+++||+..++....+.
T Consensus 149 ~l~~~~~~~~i~i~d~~----~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~i~d~~~~~~~~~~~------- 216 (289)
T cd00200 149 FVASSSQDGTIKLWDLR----TGKCVATLTGHTGEVNSVAFSP-DGEKLLSSSSDGTIKLWDLSTGKCLGTLR------- 216 (289)
T ss_pred EEEEEcCCCcEEEEEcc----ccccceeEecCccccceEEECC-CcCEEEEecCCCcEEEEECCCCceecchh-------
Confidence 99988889999999775 3455667778888999999997 78889999999999999998754433220
Q ss_pred hhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEc
Q psy14906 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYIT 421 (583)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 421 (583)
.+...+.+++++
T Consensus 217 --------------------------------------------------------------------~~~~~i~~~~~~ 228 (289)
T cd00200 217 --------------------------------------------------------------------GHENGVNSVAFS 228 (289)
T ss_pred --------------------------------------------------------------------hcCCceEEEEEc
Confidence 111468899999
Q ss_pred cCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE
Q psy14906 422 HCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487 (583)
Q Consensus 422 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 487 (583)
|++.++++++.+|.|++|++.+++....+ ..|...|.+++|+|++++|++++.|+.+++|+
T Consensus 229 ~~~~~~~~~~~~~~i~i~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 229 PDGYLLASGSEDGTIRVWDLRTGECVQTL-----SGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred CCCcEEEEEcCCCcEEEEEcCCceeEEEc-----cccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 99889998888999999999988888877 68889999999999999999999999999996
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=288.71 Aligned_cols=293 Identities=22% Similarity=0.374 Sum_probs=250.6
Q ss_pred eeeeccc-CccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCc--EEEEeeccCCceEEecccCCcceEEEeeCCCCCEEE
Q psy14906 104 VGTYKGH-TSPVHLI--LPFGPHLISVDEESNVKVWDIKAEE--TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIG 178 (583)
Q Consensus 104 ~~~~~~h-~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 178 (583)
...+.+| ...|.++ +++|+++++++.++.+++|+..+++ ....+. +|...|..++|+|++++++
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~-----------~h~~~v~~~~fs~d~~~l~ 219 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELS-----------GHTRGVSDVAFSPDGSYLL 219 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhcccc-----------ccccceeeeEECCCCcEEE
Confidence 4445454 6777775 9999999999999999999997777 555554 8999999999999999999
Q ss_pred EEecCCeEEEEEc-cCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEe
Q psy14906 179 VGLSNKKIILHNI-LTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL 257 (583)
Q Consensus 179 ~~~~d~~i~iw~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 257 (583)
+++.|++|++||+ ..+..++++.+|...|++++|+|+++ ++++|+.|++|++||++++++...+ .+|.+.|++++|+
T Consensus 220 s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~-~i~Sgs~D~tvriWd~~~~~~~~~l-~~hs~~is~~~f~ 297 (456)
T KOG0266|consen 220 SGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGN-LLVSGSDDGTVRIWDVRTGECVRKL-KGHSDGISGLAFS 297 (456)
T ss_pred EecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCC-EEEEecCCCcEEEEeccCCeEEEee-eccCCceEEEEEC
Confidence 9999999999999 55689999999999999999999996 9999999999999999999999999 8999999999999
Q ss_pred cCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCC--CeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeecc
Q psy14906 258 YNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP--PNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGI 335 (583)
Q Consensus 258 ~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 335 (583)
+++++|++++.|+.+++||+... ...+...+.++... ++++.|+| ++.+++++..|+.+++||+..+.....+..
T Consensus 298 ~d~~~l~s~s~d~~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~fsp-~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~ 374 (456)
T KOG0266|consen 298 PDGNLLVSASYDGTIRVWDLETG--SKLCLKLLSGAENSAPVTSVQFSP-NGKYLLSASLDRTLKLWDLRSGKSVGTYTG 374 (456)
T ss_pred CCCCEEEEcCCCccEEEEECCCC--ceeeeecccCCCCCCceeEEEECC-CCcEEEEecCCCeEEEEEccCCcceeeecc
Confidence 99999999999999999976532 21145666666555 89999997 899999999999999999998876554311
Q ss_pred chhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCc
Q psy14906 336 ASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKP 415 (583)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i 415 (583)
... . ...+
T Consensus 375 ~~~---------------------------------------------------------~---------------~~~~ 382 (456)
T KOG0266|consen 375 HSN---------------------------------------------------------L---------------VRCI 382 (456)
T ss_pred cCC---------------------------------------------------------c---------------ceeE
Confidence 100 0 0123
Q ss_pred eEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCc-ccCeeEEEEeCCCcEEEEee--cCCcEEEEEcc
Q psy14906 416 TCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGH-VGGVRGVVSDNLNQIVISGG--NDQTVKVWHFK 489 (583)
Q Consensus 416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~--~dg~i~iwd~~ 489 (583)
.+...++.++++++|+.|+.|++|+..++..+..+ .+| ...+..+.++|..+++++++ .|+.+++|..+
T Consensus 383 ~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l-----~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 383 FSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRL-----EGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred ecccccCCCCeEEEEeCCceEEEEeCCccchhhhh-----cCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 44555889999999999999999999999988888 789 89999999999999999998 78899999754
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=270.28 Aligned_cols=292 Identities=17% Similarity=0.215 Sum_probs=250.0
Q ss_pred ceeEEEeccCCCeEEEEEec-CCCCEEEEEcCCCcEEEEeCCC-CeehhhhhhccccceEEEEEecCCCEEEEEeCCCeE
Q psy14906 195 ESLMEFIQTWGPVTALSFRT-DGPPMMVSGSNTGHLTVWNLED-RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272 (583)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i 272 (583)
+.+..+.+|...|+++.|.| .+. +|++++.|+.|+||++.. +++++++ .+|..+|.+++|+++|..|++++.|+.+
T Consensus 205 k~~~~~~gH~kgvsai~~fp~~~h-LlLS~gmD~~vklW~vy~~~~~lrtf-~gH~k~Vrd~~~s~~g~~fLS~sfD~~l 282 (503)
T KOG0282|consen 205 KLSHNLSGHTKGVSAIQWFPKKGH-LLLSGGMDGLVKLWNVYDDRRCLRTF-KGHRKPVRDASFNNCGTSFLSASFDRFL 282 (503)
T ss_pred hheeeccCCccccchhhhccceee-EEEecCCCceEEEEEEecCcceehhh-hcchhhhhhhhccccCCeeeeeecceee
Confidence 55677889999999999999 555 999999999999999987 8899999 8999999999999999999999999999
Q ss_pred EEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcc
Q psy14906 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKM 352 (583)
Q Consensus 273 ~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (583)
++||.+ .++++..+.. ...++++.|.|.+.+.+++|+.|+.|+.||+++++.++.+...
T Consensus 283 KlwDtE----TG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~h---------------- 341 (503)
T KOG0282|consen 283 KLWDTE----TGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRH---------------- 341 (503)
T ss_pred eeeccc----cceEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhh----------------
Confidence 999665 5677776653 4567999999966699999999999999999999876654221
Q ss_pred ccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec
Q psy14906 353 NEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS 432 (583)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 432 (583)
-..+..+.|-++|+++++.+.
T Consensus 342 -----------------------------------------------------------Lg~i~~i~F~~~g~rFissSD 362 (503)
T KOG0282|consen 342 -----------------------------------------------------------LGAILDITFVDEGRRFISSSD 362 (503)
T ss_pred -----------------------------------------------------------hhheeeeEEccCCceEeeecc
Confidence 157889999999999999999
Q ss_pred CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCC-CceEEeec---cCCeeeE
Q psy14906 433 SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK-PPLRSIKL---DNGISFF 508 (583)
Q Consensus 433 dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~---~~~v~~~ 508 (583)
|+.++||+...+..+.... ..+.....++..+|++++++.-+.|..|.++.+..... ...+.++. .+--..+
T Consensus 363 dks~riWe~~~~v~ik~i~----~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v 438 (503)
T KOG0282|consen 363 DKSVRIWENRIPVPIKNIA----DPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQV 438 (503)
T ss_pred CccEEEEEcCCCccchhhc----chhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeE
Confidence 9999999999887776654 33455678899999999999999999999998754321 11122333 3456789
Q ss_pred EeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCC-cEEEEEeCCCeEEEEe
Q psy14906 509 RTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDS-RWLITASMDCTIRVWD 572 (583)
Q Consensus 509 ~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~-~~l~s~~~d~~i~vw~ 572 (583)
.|||||++|++|+.||.+.+||.++.+++..+++|..++..+.|+|.. ..+||++.||.|++|+
T Consensus 439 ~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 439 DFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred EEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 999999999999999999999999999999999999999999999954 5799999999999996
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=244.41 Aligned_cols=419 Identities=15% Similarity=0.173 Sum_probs=309.0
Q ss_pred CCeEEEEeccceeeeeecccCccEEEE--ccCCCEEEEEeCCC--------cEEEEEcCCCcEEEEeeccCCceEEeccc
Q psy14906 91 NNIIYAWRRGIDIVGTYKGHTSPVHLI--LPFGPHLISVDEES--------NVKVWDIKAEETYLELSFDNDTFKIMGKR 160 (583)
Q Consensus 91 ~~~i~vw~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg--------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 160 (583)
-+...+++.+.+..+.+.+|+..|.|+ +||.-.+++|-..| .+++||..+-..++.+. .
T Consensus 84 A~V~Vl~n~ee~~Qr~y~GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~V~g-----------~ 152 (626)
T KOG2106|consen 84 AAVGVLYNWEERSQRHYLGHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLHVIG-----------F 152 (626)
T ss_pred ccEEEEEeehhhhcccccCCCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccceeeeeec-----------c
Confidence 345667777776778899999999998 99998888764444 59999988877777776 5
Q ss_pred CCcceEEEeeCC--CCCEEEEE--ecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q psy14906 161 WNSCVNVLEPSP--VVDIIGVG--LSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED 236 (583)
Q Consensus 161 ~~~~i~~~~~s~--~~~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 236 (583)
....|.|++|++ .|.+|+.. +.+..+.+||.+.+............|....|+|.++.++++++ .+.+..|+++.
T Consensus 153 f~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~G-k~H~~Fw~~~~ 231 (626)
T KOG2106|consen 153 FDRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCG-KGHLYFWTLRG 231 (626)
T ss_pred ccccceeeeecccCCCceEEEecCCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeC-CceEEEEEccC
Confidence 678999999997 35566554 33457899999988888777777788999999999987777776 57999999998
Q ss_pred Ceehh---hhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEe
Q psy14906 237 RQVEN---QIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSA 313 (583)
Q Consensus 237 ~~~~~---~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 313 (583)
+.+.+ .+.+.....|.|++|.++|. +++|..+|.|.||+.. ..+..+....|.+.|.+++... +| .|++|
T Consensus 232 ~~l~k~~~~fek~ekk~Vl~v~F~engd-viTgDS~G~i~Iw~~~----~~~~~k~~~aH~ggv~~L~~lr-~G-tllSG 304 (626)
T KOG2106|consen 232 GSLVKRQGIFEKREKKFVLCVTFLENGD-VITGDSGGNILIWSKG----TNRISKQVHAHDGGVFSLCMLR-DG-TLLSG 304 (626)
T ss_pred CceEEEeeccccccceEEEEEEEcCCCC-EEeecCCceEEEEeCC----CceEEeEeeecCCceEEEEEec-Cc-cEeec
Confidence 75443 34233347899999999997 6799999999999543 3455555559999999999984 55 56669
Q ss_pred eCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecC
Q psy14906 314 AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFY 393 (583)
Q Consensus 314 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 393 (583)
+.|+.|..|| ..-+..+....+ ....++....... .. +..++..+.+..=.++
T Consensus 305 gKDRki~~Wd-~~y~k~r~~elP-------------------e~~G~iRtv~e~~------~d-i~vGTtrN~iL~Gt~~ 357 (626)
T KOG2106|consen 305 GKDRKIILWD-DNYRKLRETELP-------------------EQFGPIRTVAEGK------GD-ILVGTTRNFILQGTLE 357 (626)
T ss_pred CccceEEecc-ccccccccccCc-------------------hhcCCeeEEecCC------Cc-EEEeeccceEEEeeec
Confidence 9999999999 222222222111 0111111111111 11 3334444333332222
Q ss_pred cccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcE
Q psy14906 394 KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQI 473 (583)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 473 (583)
..- ......|......++.+|+...+++++.|+.+++|+ ..++... ..-..++.|+.|+|.| .
T Consensus 358 ~~f--------~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt------~~~~d~~~~~~fhpsg-~ 420 (626)
T KOG2106|consen 358 NGF--------TLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWT------KIIEDPAECADFHPSG-V 420 (626)
T ss_pred CCc--------eEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEE------EEecCceeEeeccCcc-e
Confidence 211 111223335788899999999999999999999999 3344333 2456778999999999 9
Q ss_pred EEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEcccc-ceEEee-cccccceeeEE
Q psy14906 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTC-TIIRKL-SGHMGQLTDAD 551 (583)
Q Consensus 474 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~-~~h~~~v~~l~ 551 (583)
+|.|...|...+.|.++. .++......+++++++|+|+|.+||+|+.|+.|+||.+... ...... +.|.++|+.+.
T Consensus 421 va~Gt~~G~w~V~d~e~~--~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLD 498 (626)
T KOG2106|consen 421 VAVGTATGRWFVLDTETQ--DLVTIHTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLD 498 (626)
T ss_pred EEEeeccceEEEEecccc--eeEEEEecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEee
Confidence 999999999999999987 67766666889999999999999999999999999998654 333222 23448999999
Q ss_pred ecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 552 FSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 552 ~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
||+|+++|.+-+.|-.|..|...
T Consensus 499 wS~Ds~~~~~~S~d~eiLyW~~~ 521 (626)
T KOG2106|consen 499 WSSDSQFLVSNSGDYEILYWKPS 521 (626)
T ss_pred ecCCCceEEeccCceEEEEEccc
Confidence 99999999999999999999443
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-37 Score=261.92 Aligned_cols=294 Identities=15% Similarity=0.159 Sum_probs=241.0
Q ss_pred ceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcE---EEEeeccCCceEEecccCCcceEEEeeCCCCC
Q psy14906 101 IDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEET---YLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD 175 (583)
Q Consensus 101 ~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 175 (583)
.+..+.+..|+..|+-+ |++|+|||+++.|.+..+|++..... ..++. +|..+|..+.||||.+
T Consensus 214 ~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlv-----------gh~~~V~yi~wSPDdr 282 (519)
T KOG0293|consen 214 SQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLV-----------GHSQPVSYIMWSPDDR 282 (519)
T ss_pred chhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeee-----------cccCceEEEEECCCCC
Confidence 34567788999999986 99999999999999999999876443 56666 9999999999999999
Q ss_pred EEEEEecCCeEEEEEccCCceeEEEe-ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEE
Q psy14906 176 IIGVGLSNKKIILHNILTDESLMEFI-QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGA 254 (583)
Q Consensus 176 ~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~ 254 (583)
+|++|+.+..+.+||+.+|+....+. ++...+.+++|.|||. .+++|+.|+++..||++ |.............|.++
T Consensus 283 yLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~-~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dl 360 (519)
T KOG0293|consen 283 YLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGF-RFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDL 360 (519)
T ss_pred eEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCc-eeEecCCCCcEEEecCC-cchhhcccccccceeEEE
Confidence 99999999999999999999988876 4467899999999999 79999999999999997 455555522334579999
Q ss_pred EEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeec
Q psy14906 255 HFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLG 334 (583)
Q Consensus 255 ~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 334 (583)
+.++||+++++.+.|..+++++..... -..+-....+|++++.+. +++++++.-.+..+++||++....++.+.
T Consensus 361 ait~Dgk~vl~v~~d~~i~l~~~e~~~-----dr~lise~~~its~~iS~-d~k~~LvnL~~qei~LWDl~e~~lv~kY~ 434 (519)
T KOG0293|consen 361 AITYDGKYVLLVTVDKKIRLYNREARV-----DRGLISEEQPITSFSISK-DGKLALVNLQDQEIHLWDLEENKLVRKYF 434 (519)
T ss_pred EEcCCCcEEEEEecccceeeechhhhh-----hhccccccCceeEEEEcC-CCcEEEEEcccCeeEEeecchhhHHHHhh
Confidence 999999999999999999999764321 111233456899999995 89999999999999999998766554331
Q ss_pred cchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCC
Q psy14906 335 IASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSK 414 (583)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (583)
... ....
T Consensus 435 Ghk-------------------------------------------------------------------------q~~f 441 (519)
T KOG0293|consen 435 GHK-------------------------------------------------------------------------QGHF 441 (519)
T ss_pred ccc-------------------------------------------------------------------------ccce
Confidence 000 0012
Q ss_pred ceEEEEc-cCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC-cEEEEeecCCcEEEEEccCC
Q psy14906 415 PTCVYIT-HCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN-QIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 415 i~~~~~s-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~ 491 (583)
+..-||- .+..++++|++|+.|+||+..+++++..+ .+|...|++++|+|.. .++|++++||+|+||.....
T Consensus 442 iIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~L-----sGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 442 IIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVL-----SGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSDN 515 (519)
T ss_pred EEEeccCCCCcceEEecCCCceEEEEEccCCceeEee-----cCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCcc
Confidence 3333443 35689999999999999999999999999 8999999999999955 68999999999999987653
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-36 Score=235.46 Aligned_cols=279 Identities=15% Similarity=0.191 Sum_probs=245.3
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
.+.++|.++.|+-||++.++++.|.+|++||...+.+++++.+|...|..++.+.|+. .+++|+.|..+.+||+++|+.
T Consensus 15 ~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dns-kf~s~GgDk~v~vwDV~TGkv 93 (307)
T KOG0316|consen 15 CAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNS-KFASCGGDKAVQVWDVNTGKV 93 (307)
T ss_pred ccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeecccccccc-ccccCCCCceEEEEEcccCee
Confidence 8899999999999999999999999999999999999999999999999999999988 799999999999999999999
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
.+.+ .+|.+.|+.+.|+.+...+++|+.|.++++||.. ....++++.+......|.++... +..+++|+.||++
T Consensus 94 ~Rr~-rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCR--S~s~ePiQildea~D~V~Si~v~---~heIvaGS~DGtv 167 (307)
T KOG0316|consen 94 DRRF-RGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCR--SRSFEPIQILDEAKDGVSSIDVA---EHEIVAGSVDGTV 167 (307)
T ss_pred eeec-ccccceeeEEEecCcceEEEeccccceeEEEEcc--cCCCCccchhhhhcCceeEEEec---ccEEEeeccCCcE
Confidence 9999 8999999999999999999999999999999554 44778888888888899999884 6789999999999
Q ss_pred EEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 320 RIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 320 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
+.||++.+......
T Consensus 168 RtydiR~G~l~sDy------------------------------------------------------------------ 181 (307)
T KOG0316|consen 168 RTYDIRKGTLSSDY------------------------------------------------------------------ 181 (307)
T ss_pred EEEEeecceeehhh------------------------------------------------------------------
Confidence 99999988653221
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeE--EEEeCCCcEEEEe
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRG--VVSDNLNQIVISG 477 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~--~~~s~~~~~l~s~ 477 (583)
-..+|++++|++|++..++++-|+.+++.|-.+|+.+..+ .+|...-.. .+++.....+++|
T Consensus 182 -----------~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sY-----kGhkn~eykldc~l~qsdthV~sg 245 (307)
T KOG0316|consen 182 -----------FGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSY-----KGHKNMEYKLDCCLNQSDTHVFSG 245 (307)
T ss_pred -----------cCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHh-----cccccceeeeeeeecccceeEEec
Confidence 0167999999999999999999999999999999999999 788776554 4566667899999
Q ss_pred ecCCcEEEEEccCCCCCceEEeeccCC--eeeEEeccCCcEEEEEeCCceEEEEE
Q psy14906 478 GNDQTVKVWHFKQTGKPPLRSIKLDNG--ISFFRTHQESSMLAVCLDDFTVNIID 530 (583)
Q Consensus 478 ~~dg~i~iwd~~~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~dg~i~i~d 530 (583)
++||.|++||+... ..+..+.+.+. +..+.++|...-++++...+ +..|-
T Consensus 246 SEDG~Vy~wdLvd~--~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~~~-~~~~~ 297 (307)
T KOG0316|consen 246 SEDGKVYFWDLVDE--TQISKLSVVSTVIVTDLSCHPTMDDFITATGHG-DLFWY 297 (307)
T ss_pred cCCceEEEEEeccc--eeeeeeccCCceeEEeeecccCccceeEecCCc-eecee
Confidence 99999999999988 78877877753 68899999887777665443 44443
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-35 Score=301.16 Aligned_cols=309 Identities=17% Similarity=0.210 Sum_probs=240.7
Q ss_pred CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCC----c----eeEEEe
Q psy14906 130 ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD----E----SLMEFI 201 (583)
Q Consensus 130 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~----~----~~~~~~ 201 (583)
+|.+++|+..+.+....+... .. ..|...|.+++|+|++++||+|+.|+.|+||+.... . +...+.
T Consensus 457 ~gl~~~~~~~~~~~~~~~~~~--~~----~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~ 530 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLKQG--DL----LNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA 530 (793)
T ss_pred hhhhhhhcccceEEEEeeccc--cc----cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec
Confidence 677889998876554443311 00 158899999999999999999999999999997532 1 223344
Q ss_pred ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEec-CCCEEEEEeCCCeEEEEEccCC
Q psy14906 202 QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLY-NEPLLVTSSPDNTLKLWIFDKA 280 (583)
Q Consensus 202 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~w~~~~~ 280 (583)
++ ..+.+++|+|....+|++++.||+|++||+.+++.+..+ .+|.+.|++++|+| ++.+|++|+.|+.|++||+.
T Consensus 531 ~~-~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~-~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~-- 606 (793)
T PLN00181 531 SR-SKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEM-KEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSIN-- 606 (793)
T ss_pred cc-CceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEe-cCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECC--
Confidence 44 789999999864448999999999999999999988888 79999999999996 78999999999999999775
Q ss_pred CCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCc
Q psy14906 281 DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPP 360 (583)
Q Consensus 281 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (583)
....+..+..+ ..+.++.|.+.++.+|++|+.||.|++||+++...
T Consensus 607 --~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~------------------------------- 652 (793)
T PLN00181 607 --QGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKL------------------------------- 652 (793)
T ss_pred --CCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCc-------------------------------
Confidence 34455555544 56788888766788888888888888888754210
Q ss_pred cceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEE
Q psy14906 361 VSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFN 440 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d 440 (583)
T Consensus 653 -------------------------------------------------------------------------------- 652 (793)
T PLN00181 653 -------------------------------------------------------------------------------- 652 (793)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCC----CCceEEeec-cCCeeeEEeccCCc
Q psy14906 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG----KPPLRSIKL-DNGISFFRTHQESS 515 (583)
Q Consensus 441 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~-~~~v~~~~~s~~~~ 515 (583)
....+ .+|...|.++.|. ++.+|++++.|++|++||+.... ..++..+.. ...+.+++|+|++.
T Consensus 653 -----~~~~~-----~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~ 721 (793)
T PLN00181 653 -----PLCTM-----IGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDG 721 (793)
T ss_pred -----cceEe-----cCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCC
Confidence 01112 4788889999996 67789999999999999987431 134555543 46788999999999
Q ss_pred EEEEEeCCceEEEEEccccceEEe-------------ecccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 516 MLAVCLDDFTVNIIDIDTCTIIRK-------------LSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 516 ~l~~~~~dg~i~i~d~~~~~~~~~-------------~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
+||+|+.|+.|++|+......+.. ...|...|.+++|+|++..|++|+.||.|+||++
T Consensus 722 ~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 722 YIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred EEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 999999999999999876543322 1235567999999999999999999999999996
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=254.53 Aligned_cols=284 Identities=19% Similarity=0.292 Sum_probs=247.2
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCce
Q psy14906 117 ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDES 196 (583)
Q Consensus 117 is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~ 196 (583)
+||||+||++|+.||.|.+||..+|+....+++.....-. -+..+|.|+.||.|...||+|+.||.|++|.+++|.+
T Consensus 221 FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fM---Mmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~C 297 (508)
T KOG0275|consen 221 FSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFM---MMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQC 297 (508)
T ss_pred eCCCCceEeeccccceeeeehhccchhhhhhhhhhhccee---ecccceEEEeecccHHHhhccCcCCcEEEEEEecchH
Confidence 5999999999999999999999999887777655332222 5689999999999999999999999999999999999
Q ss_pred eEEEe-ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy14906 197 LMEFI-QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275 (583)
Q Consensus 197 ~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w 275 (583)
++.|. .|+..|+|+.|+.|+. .+++++.|.++++--+.+|++++.+ ++|...|+...|.+||..+++++.||+|++|
T Consensus 298 lRrFdrAHtkGvt~l~FSrD~S-qiLS~sfD~tvRiHGlKSGK~LKEf-rGHsSyvn~a~ft~dG~~iisaSsDgtvkvW 375 (508)
T KOG0275|consen 298 LRRFDRAHTKGVTCLSFSRDNS-QILSASFDQTVRIHGLKSGKCLKEF-RGHSSYVNEATFTDDGHHIISASSDGTVKVW 375 (508)
T ss_pred HHHhhhhhccCeeEEEEccCcc-hhhcccccceEEEeccccchhHHHh-cCccccccceEEcCCCCeEEEecCCccEEEe
Confidence 99998 8999999999999998 7999999999999999999999999 8999999999999999999999999999999
Q ss_pred EccCCCCCceeeEEec--cCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 276 IFDKADGNGRLLRIRE--GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 276 ~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
+.. ...++.+++ +...+|+++...|.+...++.+....++.+.++.. +.++.+..+.
T Consensus 376 ~~K----tteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qG-QvVrsfsSGk---------------- 434 (508)
T KOG0275|consen 376 HGK----TTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQG-QVVRSFSSGK---------------- 434 (508)
T ss_pred cCc----chhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccc-eEEeeeccCC----------------
Confidence 543 445555554 34567899999998889999999999999998753 3333321110
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 433 (583)
. ..+...+.+++|.|.++++.++|
T Consensus 435 -----------------------------------------R---------------EgGdFi~~~lSpkGewiYcigED 458 (508)
T KOG0275|consen 435 -----------------------------------------R---------------EGGDFINAILSPKGEWIYCIGED 458 (508)
T ss_pred -----------------------------------------c---------------cCCceEEEEecCCCcEEEEEccC
Confidence 0 01456788899999999999999
Q ss_pred ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE
Q psy14906 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487 (583)
Q Consensus 434 g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 487 (583)
+.++.|...+|+....+ .-|...+..++-+|..+.||+-++||.+++|.
T Consensus 459 ~vlYCF~~~sG~LE~tl-----~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 459 GVLYCFSVLSGKLERTL-----PVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred cEEEEEEeecCceeeee-----ecccccccccccCcccchhhhhcccchhhhcC
Confidence 99999999999999998 78999999999999999999999999999995
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=231.69 Aligned_cols=286 Identities=14% Similarity=0.154 Sum_probs=243.3
Q ss_pred eeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEE
Q psy14906 102 DIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV 179 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 179 (583)
+..+.+..|+++|.++ .-||+|.++++.|.+|++|+...|.+++++. +|...|..++.+.|...+++
T Consensus 8 kr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYs-----------ghG~EVlD~~~s~Dnskf~s 76 (307)
T KOG0316|consen 8 KRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYS-----------GHGHEVLDAALSSDNSKFAS 76 (307)
T ss_pred hhceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeec-----------CCCceeeecccccccccccc
Confidence 4567788999999997 8899999999999999999999999999998 99999999999999999999
Q ss_pred EecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC--eehhhhhhccccceEEEEEe
Q psy14906 180 GLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR--QVENQIKKAHRKVVTGAHFL 257 (583)
Q Consensus 180 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~~v~~~~~~ 257 (583)
|+.|..+.+||+.+|+.++.|.+|.+.|+.++|+.+.. .+++|+.|..+++||-++. ++++.+ ....+.|.++..+
T Consensus 77 ~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesS-Vv~SgsfD~s~r~wDCRS~s~ePiQil-dea~D~V~Si~v~ 154 (307)
T KOG0316|consen 77 CGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESS-VVASGSFDSSVRLWDCRSRSFEPIQIL-DEAKDGVSSIDVA 154 (307)
T ss_pred CCCCceEEEEEcccCeeeeecccccceeeEEEecCcce-EEEeccccceeEEEEcccCCCCccchh-hhhcCceeEEEec
Confidence 99999999999999999999999999999999999988 9999999999999999764 677777 6778899998885
Q ss_pred cCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccch
Q psy14906 258 YNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIAS 337 (583)
Q Consensus 258 ~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 337 (583)
+..|++|+.||+++.||+. .+....-.- ..+|++++|++ +++..+.++.|+++++.|-.+++.++.+....
T Consensus 155 --~heIvaGS~DGtvRtydiR----~G~l~sDy~--g~pit~vs~s~-d~nc~La~~l~stlrLlDk~tGklL~sYkGhk 225 (307)
T KOG0316|consen 155 --EHEIVAGSVDGTVRTYDIR----KGTLSSDYF--GHPITSVSFSK-DGNCSLASSLDSTLRLLDKETGKLLKSYKGHK 225 (307)
T ss_pred --ccEEEeeccCCcEEEEEee----cceeehhhc--CCcceeEEecC-CCCEEEEeeccceeeecccchhHHHHHhcccc
Confidence 5679999999999999876 344444333 45899999997 89999999999999999999998776541100
Q ss_pred hhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceE
Q psy14906 338 ANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTC 417 (583)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 417 (583)
....-..
T Consensus 226 -------------------------------------------------------------------------n~eykld 232 (307)
T KOG0316|consen 226 -------------------------------------------------------------------------NMEYKLD 232 (307)
T ss_pred -------------------------------------------------------------------------cceeeee
Confidence 0022345
Q ss_pred EEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccC-eeEEEEeCCCcEEEEeecCCcEEEEEc
Q psy14906 418 VYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG-VRGVVSDNLNQIVISGGNDQTVKVWHF 488 (583)
Q Consensus 418 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~-v~~~~~s~~~~~l~s~~~dg~i~iwd~ 488 (583)
.+++.....++.|++||.|++||+.....+..+ ..+... |.++.++|....|+++.. +.+..|.-
T Consensus 233 c~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~-----~~~~~v~v~dl~~hp~~~~f~~A~~-~~~~~~~~ 298 (307)
T KOG0316|consen 233 CCLNQSDTHVFSGSEDGKVYFWDLVDETQISKL-----SVVSTVIVTDLSCHPTMDDFITATG-HGDLFWYQ 298 (307)
T ss_pred eeecccceeEEeccCCceEEEEEeccceeeeee-----ccCCceeEEeeecccCccceeEecC-Cceeceee
Confidence 567777889999999999999999999998888 566666 899999998877777764 44555643
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=250.38 Aligned_cols=284 Identities=21% Similarity=0.261 Sum_probs=242.2
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEe--------ccCCCeEEEEEecCCCCEEEEEcCCCcEEE
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI--------QTWGPVTALSFRTDGPPMMVSGSNTGHLTV 231 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v 231 (583)
+....+.|..|||||++|++|+.||-|.+||..+|+..+.++ -+..+|.|+.|+.|.. ++++|+.||.|++
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsE-MlAsGsqDGkIKv 289 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSE-MLASGSQDGKIKV 289 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHH-HhhccCcCCcEEE
Confidence 667889999999999999999999999999999998765543 4568999999999999 9999999999999
Q ss_pred EeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEE
Q psy14906 232 WNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL 311 (583)
Q Consensus 232 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 311 (583)
|.+++|.+++.+.++|...|+++.|+.|+..+++++.|.++++.-+. .+++++.+++|...|+...|.+ +|..++
T Consensus 290 Wri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlK----SGK~LKEfrGHsSyvn~a~ft~-dG~~ii 364 (508)
T KOG0275|consen 290 WRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLK----SGKCLKEFRGHSSYVNEATFTD-DGHHII 364 (508)
T ss_pred EEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccc----cchhHHHhcCccccccceEEcC-CCCeEE
Confidence 99999999999988999999999999999999999999999999554 7899999999999999999996 899999
Q ss_pred EeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEee
Q psy14906 312 SAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWS 391 (583)
Q Consensus 312 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 391 (583)
+++.||++++|+..+.++...+..
T Consensus 365 saSsDgtvkvW~~KtteC~~Tfk~-------------------------------------------------------- 388 (508)
T KOG0275|consen 365 SASSDGTVKVWHGKTTECLSTFKP-------------------------------------------------------- 388 (508)
T ss_pred EecCCccEEEecCcchhhhhhccC--------------------------------------------------------
Confidence 999999999999988777654421
Q ss_pred cCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC
Q psy14906 392 FYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN 471 (583)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 471 (583)
.+...+|..+..-|.+
T Consensus 389 ----------------------------------------------------------------~~~d~~vnsv~~~PKn 404 (508)
T KOG0275|consen 389 ----------------------------------------------------------------LGTDYPVNSVILLPKN 404 (508)
T ss_pred ----------------------------------------------------------------CCCcccceeEEEcCCC
Confidence 1222334444444422
Q ss_pred -cEEEEeecCCcEEEEEccCCCCCceEEeec----cCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccc
Q psy14906 472 -QIVISGGNDQTVKVWHFKQTGKPPLRSIKL----DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ 546 (583)
Q Consensus 472 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~ 546 (583)
..++.|....++.|-++.. +.++.+.. .+...+.+.||.|.++.+.++|+.++.|.+.+|++...+.-|...
T Consensus 405 peh~iVCNrsntv~imn~qG---QvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkd 481 (508)
T KOG0275|consen 405 PEHFIVCNRSNTVYIMNMQG---QVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKD 481 (508)
T ss_pred CceEEEEcCCCeEEEEeccc---eEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeeeccccc
Confidence 3556666666777777654 45555533 246778889999999999999999999999999999999999999
Q ss_pred eeeEEecCCCcEEEEEeCCCeEEEEe
Q psy14906 547 LTDADFSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 547 v~~l~~s~d~~~l~s~~~d~~i~vw~ 572 (583)
|..++-+|..+.||+-++||.+++|.
T Consensus 482 vIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 482 VIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred ccccccCcccchhhhhcccchhhhcC
Confidence 99999999999999999999999995
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=236.89 Aligned_cols=295 Identities=17% Similarity=0.265 Sum_probs=243.9
Q ss_pred EEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEcc
Q psy14906 199 EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 199 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 278 (583)
.+.+|+.+++.+.|+.+|. +|++++.|.+..||-..+|+.+.++ .+|.+.|.++..+.+.+.+++|+.|.++++||+.
T Consensus 5 ~l~GHERplTqiKyN~eGD-LlFscaKD~~~~vw~s~nGerlGty-~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~ 82 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGD-LLFSCAKDSTPTVWYSLNGERLGTY-DGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVE 82 (327)
T ss_pred ccccCccccceEEecCCCc-EEEEecCCCCceEEEecCCceeeee-cCCCceEEEEEecCCcceeeeccccceeEEEEcC
Confidence 3678999999999999999 9999999999999999899999999 8999999999999999999999999999999775
Q ss_pred CCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC-----CCcEEEEEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-----DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
.++.+..++ ...+|..+.|++ ++++++.... .+.|.++|++.......-
T Consensus 83 ----tGk~la~~k-~~~~Vk~~~F~~-~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s-------------------- 136 (327)
T KOG0643|consen 83 ----TGKQLATWK-TNSPVKRVDFSF-GGNLILASTDKQMGYTCFVSVFDIRDDSSDIDS-------------------- 136 (327)
T ss_pred ----CCcEEEEee-cCCeeEEEeecc-CCcEEEEEehhhcCcceEEEEEEccCChhhhcc--------------------
Confidence 567777766 356899999997 6777666543 467888887753211000
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 433 (583)
. .+......+...++.+-|.|-+++|++|.++
T Consensus 137 -----------------------------~-------------------ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~ 168 (327)
T KOG0643|consen 137 -----------------------------E-------------------EPYLKIPTPDSKITSALWGPLGETIIAGHED 168 (327)
T ss_pred -----------------------------c-------------------CceEEecCCccceeeeeecccCCEEEEecCC
Confidence 0 0000000111678999999999999999999
Q ss_pred ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccC
Q psy14906 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQE 513 (583)
Q Consensus 434 g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~ 513 (583)
|.|.+||+++|+...... ..|...|+.+.++||..++++++.|.+-++||..+. ++++++....|+++.+++|-
T Consensus 169 G~is~~da~~g~~~v~s~----~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl--~v~Kty~te~PvN~aaisP~ 242 (327)
T KOG0643|consen 169 GSISIYDARTGKELVDSD----EEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTL--EVLKTYTTERPVNTAAISPL 242 (327)
T ss_pred CcEEEEEcccCceeeech----hhhccccccccccCCcceEEecccCccceeeeccce--eeEEEeeecccccceecccc
Confidence 999999999986655443 679999999999999999999999999999999999 99999999999999999998
Q ss_pred CcEEEEEeCCc--------------eEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCC
Q psy14906 514 SSMLAVCLDDF--------------TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575 (583)
Q Consensus 514 ~~~l~~~~~dg--------------~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~ 575 (583)
...++.|+... ..++|++-..+.+..+++|-++|++++|+|||+..++|++||.|++..++.
T Consensus 243 ~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~ 318 (327)
T KOG0643|consen 243 LDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDS 318 (327)
T ss_pred cceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEecc
Confidence 88777765432 234444445567788899999999999999999999999999999987654
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-34 Score=242.19 Aligned_cols=284 Identities=19% Similarity=0.303 Sum_probs=238.0
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCC--CEEEEEcCCCcEEEEeCCCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGP--PMMVSGSNTGHLTVWNLEDR 237 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~s~~~dg~i~vwd~~~~ 237 (583)
.|...|.++... ++.+++|++||.+++||.. |+....+.+|.+++.+++|.-.++ ..|++++.|.++++|..+.+
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~-Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~ 179 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWDLK-GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVG 179 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEecC-CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCc
Confidence 678888888887 7899999999999999985 999999999999999888864433 26999999999999999877
Q ss_pred eeh----hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccC---------------------CCCCceeeEEecc
Q psy14906 238 QVE----NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK---------------------ADGNGRLLRIREG 292 (583)
Q Consensus 238 ~~~----~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~---------------------~~~~~~~~~~~~~ 292 (583)
+.. ..- .||...|.++...++|..+++|+.|.++++|+... ..+...++.++.+
T Consensus 180 ~~~~~~~~~~-~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~G 258 (423)
T KOG0313|consen 180 ENKVKALKVC-RGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEG 258 (423)
T ss_pred hhhhhHHhHh-cccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecc
Confidence 542 222 59999999999999999999999999999998311 1123456677899
Q ss_pred CCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccccc
Q psy14906 293 HSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREK 372 (583)
Q Consensus 293 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (583)
|..+|.++.|+ +...+++++.|.+|+.||+.++.....+...
T Consensus 259 Ht~~Vs~V~w~--d~~v~yS~SwDHTIk~WDletg~~~~~~~~~------------------------------------ 300 (423)
T KOG0313|consen 259 HTEPVSSVVWS--DATVIYSVSWDHTIKVWDLETGGLKSTLTTN------------------------------------ 300 (423)
T ss_pred cccceeeEEEc--CCCceEeecccceEEEEEeecccceeeeecC------------------------------------
Confidence 99999999998 4779999999999999999998776544211
Q ss_pred ccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcc---ccc
Q psy14906 373 DWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH---RGS 449 (583)
Q Consensus 373 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~---~~~ 449 (583)
..+.++.++|..++|++|+.|..+++||.+++.- .++
T Consensus 301 ----------------------------------------ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s 340 (423)
T KOG0313|consen 301 ----------------------------------------KSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQS 340 (423)
T ss_pred ----------------------------------------cceeEeecccccceeeecCCCCceeecCCCCCCCceeEEe
Confidence 5688999999999999999999999999987642 233
Q ss_pred cCCCCCCCcccCeeEEEEeCCC-cEEEEeecCCcEEEEEccCCCCCceEEe-eccCCeeeEEeccCCcEEEEEeCCceEE
Q psy14906 450 YGHDNQPGHVGGVRGVVSDNLN-QIVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRTHQESSMLAVCLDDFTVN 527 (583)
Q Consensus 450 ~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 527 (583)
+ .+|.+.|.++.|+|.. ..|++++.|+++++||+++... ++..+ .|...|.++.|. ++.++++|+.|.+|+
T Consensus 341 ~-----~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~-plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~ 413 (423)
T KOG0313|consen 341 L-----IGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKA-PLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLR 413 (423)
T ss_pred e-----ecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCC-cceeeccCCceEEEEecc-CCceEEeccCcceEE
Confidence 4 7999999999999966 4788999999999999998832 55555 556789999998 577999999999999
Q ss_pred EEEcc
Q psy14906 528 IIDID 532 (583)
Q Consensus 528 i~d~~ 532 (583)
|+...
T Consensus 414 i~~~~ 418 (423)
T KOG0313|consen 414 IFKGS 418 (423)
T ss_pred Eeccc
Confidence 98643
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=233.88 Aligned_cols=292 Identities=18% Similarity=0.255 Sum_probs=240.1
Q ss_pred eecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC
Q psy14906 106 TYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN 183 (583)
Q Consensus 106 ~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 183 (583)
.++||+.+++.+ ..+|.+|.+++.|.+..+|-..+|+.+.++. +|.+.|+|+..+.+.++|++|+.|
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~-----------GHtGavW~~Did~~s~~liTGSAD 73 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYD-----------GHTGAVWCCDIDWDSKHLITGSAD 73 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeec-----------CCCceEEEEEecCCcceeeecccc
Confidence 478999999998 8999999999999999999999999999998 999999999999999999999999
Q ss_pred CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEc-----CCCcEEEEeCC-------CCeehhhhhhccccce
Q psy14906 184 KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS-----NTGHLTVWNLE-------DRQVENQIKKAHRKVV 251 (583)
Q Consensus 184 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-----~dg~i~vwd~~-------~~~~~~~~~~~~~~~v 251 (583)
.++++||+++|+.+..++.. .+|..+.|+++|+ +++... ..+.|.++|++ +.++...+ ..+...+
T Consensus 74 ~t~kLWDv~tGk~la~~k~~-~~Vk~~~F~~~gn-~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI-~t~~ski 150 (327)
T KOG0643|consen 74 QTAKLWDVETGKQLATWKTN-SPVKRVDFSFGGN-LILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKI-PTPDSKI 150 (327)
T ss_pred ceeEEEEcCCCcEEEEeecC-CeeEEEeeccCCc-EEEEEehhhcCcceEEEEEEccCChhhhcccCceEEe-cCCccce
Confidence 99999999999999999887 8999999999999 444432 34679999998 34555556 5677899
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccce
Q psy14906 252 TGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNK 331 (583)
Q Consensus 252 ~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 331 (583)
+.+-|.|-+++|++|..||.|..||+.. ..+.+...+.|...|+.+.+++ |..++++++.|.+-++||..+-+.++
T Consensus 151 t~a~Wg~l~~~ii~Ghe~G~is~~da~~---g~~~v~s~~~h~~~Ind~q~s~-d~T~FiT~s~Dttakl~D~~tl~v~K 226 (327)
T KOG0643|consen 151 TSALWGPLGETIIAGHEDGSISIYDART---GKELVDSDEEHSSKINDLQFSR-DRTYFITGSKDTTAKLVDVRTLEVLK 226 (327)
T ss_pred eeeeecccCCEEEEecCCCcEEEEEccc---CceeeechhhhccccccccccC-CcceEEecccCccceeeeccceeeEE
Confidence 9999999999999999999999996642 2356666678999999999997 89999999999999999999887766
Q ss_pred eeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccC
Q psy14906 332 NLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAK 411 (583)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 411 (583)
.+...
T Consensus 227 ty~te--------------------------------------------------------------------------- 231 (327)
T KOG0643|consen 227 TYTTE--------------------------------------------------------------------------- 231 (327)
T ss_pred Eeeec---------------------------------------------------------------------------
Confidence 65322
Q ss_pred CCCceEEEEccCCcEEEEEecCce--EEEEEcccCcccccc-------CCCCCCCcccCeeEEEEeCCCcEEEEeecCCc
Q psy14906 412 QSKPTCVYITHCGNFVLIGYSSGH--VDRFNIQSGAHRGSY-------GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482 (583)
Q Consensus 412 ~~~i~~~~~s~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~-------~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~ 482 (583)
.++.+.+++|....++.|+.... |.--+.+.|+....+ ..-...+|-++|++++|+|+|+..++|++||.
T Consensus 232 -~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~ 310 (327)
T KOG0643|consen 232 -RPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGY 310 (327)
T ss_pred -ccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCce
Confidence 57889999998777777654221 222222223221111 01122799999999999999999999999999
Q ss_pred EEEEEccCC
Q psy14906 483 VKVWHFKQT 491 (583)
Q Consensus 483 i~iwd~~~~ 491 (583)
|++..++..
T Consensus 311 VR~h~Fd~~ 319 (327)
T KOG0643|consen 311 VRLHHFDSN 319 (327)
T ss_pred EEEEEeccc
Confidence 999877653
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=288.06 Aligned_cols=259 Identities=18% Similarity=0.217 Sum_probs=212.6
Q ss_pred CCeEEEEecCCcEEEeec-----CCCCCCeEEEEee--C-eEEEEEcCCeEEEEeccce---------eeeeecccCccE
Q psy14906 52 GKAFHVYGCNHFKLLSVS-----PQHEDDITCLSSD--F-FHIYTSANNIIYAWRRGID---------IVGTYKGHTSPV 114 (583)
Q Consensus 52 ~~~i~v~d~~~~~~~~~~-----~~h~~~v~~~~~~--~-~~~~~~~~~~i~vw~~~~~---------~~~~~~~h~~~v 114 (583)
++.+.+|+..+.+....+ ..|...|++++|+ + .+++++.|+.|+||+.... ....+. +...|
T Consensus 457 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v 535 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKL 535 (793)
T ss_pred hhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCce
Confidence 556788888876665443 3589999999994 4 4678889999999996421 122233 34566
Q ss_pred EEE--c-cCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCC-CCCEEEEEecCCeEEEEE
Q psy14906 115 HLI--L-PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSP-VVDIIGVGLSNKKIILHN 190 (583)
Q Consensus 115 ~~i--s-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iw~ 190 (583)
.++ + +++.+||+++.||+|++||+.+++.+..+. +|...|++++|+| ++.+|++|+.|+.|++||
T Consensus 536 ~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~-----------~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd 604 (793)
T PLN00181 536 SGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMK-----------EHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 604 (793)
T ss_pred eeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEec-----------CCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEE
Confidence 666 3 457899999999999999999999888887 9999999999997 789999999999999999
Q ss_pred ccCCceeEEEeccCCCeEEEEEec-CCCCEEEEEcCCCcEEEEeCCCCe-ehhhhhhccccceEEEEEecCCCEEEEEeC
Q psy14906 191 ILTDESLMEFIQTWGPVTALSFRT-DGPPMMVSGSNTGHLTVWNLEDRQ-VENQIKKAHRKVVTGAHFLYNEPLLVTSSP 268 (583)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 268 (583)
+.+++.+..+..+ ..+.++.|++ ++. +|++|+.||.|++||+++.+ ....+ .+|...|.++.|. ++.+|++++.
T Consensus 605 ~~~~~~~~~~~~~-~~v~~v~~~~~~g~-~latgs~dg~I~iwD~~~~~~~~~~~-~~h~~~V~~v~f~-~~~~lvs~s~ 680 (793)
T PLN00181 605 INQGVSIGTIKTK-ANICCVQFPSESGR-SLAFGSADHKVYYYDLRNPKLPLCTM-IGHSKTVSYVRFV-DSSTLVSSST 680 (793)
T ss_pred CCCCcEEEEEecC-CCeEEEEEeCCCCC-EEEEEeCCCeEEEEECCCCCccceEe-cCCCCCEEEEEEe-CCCEEEEEEC
Confidence 9999998888876 7899999965 466 89999999999999998765 45556 6899999999997 6789999999
Q ss_pred CCeEEEEEccCCC--CCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccc
Q psy14906 269 DNTLKLWIFDKAD--GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 269 d~~i~~w~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
|++|++||+.... .....+..+.+|...+..++|+| ++.+|++|+.|+.+++|+....
T Consensus 681 D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~-~~~~lasgs~D~~v~iw~~~~~ 740 (793)
T PLN00181 681 DNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSV-SDGYIATGSETNEVFVYHKAFP 740 (793)
T ss_pred CCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcC-CCCEEEEEeCCCEEEEEECCCC
Confidence 9999999875321 12356778899999999999997 7889999999999999997543
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=242.49 Aligned_cols=309 Identities=16% Similarity=0.298 Sum_probs=243.8
Q ss_pred ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCC---CEEEEEeCCCeEEEEEcc
Q psy14906 202 QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNE---PLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 202 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~s~~~d~~i~~w~~~ 278 (583)
.|.+.|.++.-. ++ .+++|++||.+++||.. |+...++ .+|.++|.+++|.-.. ..|++++.|.++++|.++
T Consensus 103 ~hdDWVSsv~~~--~~-~IltgsYDg~~riWd~~-Gk~~~~~-~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~ 177 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SK-WILTGSYDGTSRIWDLK-GKSIKTI-VGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWN 177 (423)
T ss_pred cchhhhhhhccc--Cc-eEEEeecCCeeEEEecC-CceEEEE-ecCCcceeeeEEEecCCccceEEEecCCceEEEEEec
Confidence 455888888877 34 89999999999999986 7788888 7999999988885433 369999999999999888
Q ss_pred CCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCC
Q psy14906 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFIL 358 (583)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (583)
......+.+....||...|.++...+ ++.++++++.|.+|.+|+..+. ....+...+..+....+.
T Consensus 178 ~~~~~~~~~~~~~GHk~~V~sVsv~~-sgtr~~SgS~D~~lkiWs~~~~-~~~~~E~~s~~rrk~~~~------------ 243 (423)
T KOG0313|consen 178 VGENKVKALKVCRGHKRSVDSVSVDS-SGTRFCSGSWDTMLKIWSVETD-EEDELESSSNRRRKKQKR------------ 243 (423)
T ss_pred CchhhhhHHhHhcccccceeEEEecC-CCCeEEeecccceeeecccCCC-ccccccccchhhhhhhhh------------
Confidence 76666666666779999999999986 8999999999999999993322 211111111100000000
Q ss_pred CccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEE
Q psy14906 359 PPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDR 438 (583)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i 438 (583)
........+.....+|..+|.++.|++ ...+++++.|.+|+.
T Consensus 244 -------------------------------------~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~ 285 (423)
T KOG0313|consen 244 -------------------------------------EKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKV 285 (423)
T ss_pred -------------------------------------hhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEE
Confidence 000011122234455668899999998 778999999999999
Q ss_pred EEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCce--EEeeccCCeeeEEeccCCc-
Q psy14906 439 FNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPL--RSIKLDNGISFFRTHQESS- 515 (583)
Q Consensus 439 ~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~~~~v~~~~~s~~~~- 515 (583)
||+.++.....+ .-.....++.++|..++|++|+.|..+++||.+++....+ ....|.+-|.++.|+|...
T Consensus 286 WDletg~~~~~~------~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~ 359 (423)
T KOG0313|consen 286 WDLETGGLKSTL------TTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEF 359 (423)
T ss_pred EEeecccceeee------ecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCce
Confidence 999999988776 4567899999999999999999999999999998754443 3345667899999999766
Q ss_pred EEEEEeCCceEEEEEccccc-eEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 516 MLAVCLDDFTVNIIDIDTCT-IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 516 ~l~~~~~dg~i~i~d~~~~~-~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
+|++|+.|+++++||+++.+ ++..+.+|.+.|.++.|+ ++..|++|+.|++|+++.-.
T Consensus 360 ~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 360 QLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred EEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEeccCcceEEEeccc
Confidence 78889999999999999887 899999999999999997 66789999999999998743
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-35 Score=233.22 Aligned_cols=286 Identities=20% Similarity=0.289 Sum_probs=250.6
Q ss_pred eeecccCccEEEE-----ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEE
Q psy14906 105 GTYKGHTSPVHLI-----LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV 179 (583)
Q Consensus 105 ~~~~~h~~~v~~i-----s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 179 (583)
.+..||+.+|..+ .|+|-+|++++.||.-.+-+-++|.-+.++. +|.+.|+...++.+..+.|+
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfe-----------ghkgavw~~~l~~na~~aas 76 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFE-----------GHKGAVWSATLNKNATRAAS 76 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeee-----------ccCcceeeeecCchhhhhhh
Confidence 3567999999986 6899999999999999999999999999998 99999999999999999999
Q ss_pred EecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe-ehhhhhhccccceEEEEEec
Q psy14906 180 GLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ-VENQIKKAHRKVVTGAHFLY 258 (583)
Q Consensus 180 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~v~~~~~~~ 258 (583)
++.|-+-++||.-+|..+..|... ..|.+++|+.|.+ .|++|+.+..++|||++..+ +...+ .+|.+.|..+.|..
T Consensus 77 aaadftakvw~a~tgdelhsf~hk-hivk~~af~~ds~-~lltgg~ekllrvfdln~p~App~E~-~ghtg~Ir~v~wc~ 153 (334)
T KOG0278|consen 77 AAADFTAKVWDAVTGDELHSFEHK-HIVKAVAFSQDSN-YLLTGGQEKLLRVFDLNRPKAPPKEI-SGHTGGIRTVLWCH 153 (334)
T ss_pred hcccchhhhhhhhhhhhhhhhhhh-heeeeEEecccch-hhhccchHHHhhhhhccCCCCCchhh-cCCCCcceeEEEec
Confidence 999999999999999999988644 7999999999998 89999999999999998754 56667 89999999999999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchh
Q psy14906 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 338 (583)
..+.|+++..|++||+||.. .+..+..+. ...+|+++.+++ +|++| +....+.|.+||..+-..++.+..+
T Consensus 154 eD~~iLSSadd~tVRLWD~r----Tgt~v~sL~-~~s~VtSlEvs~-dG~il-Tia~gssV~Fwdaksf~~lKs~k~P-- 224 (334)
T KOG0278|consen 154 EDKCILSSADDKTVRLWDHR----TGTEVQSLE-FNSPVTSLEVSQ-DGRIL-TIAYGSSVKFWDAKSFGLLKSYKMP-- 224 (334)
T ss_pred cCceEEeeccCCceEEEEec----cCcEEEEEe-cCCCCcceeecc-CCCEE-EEecCceeEEeccccccceeeccCc--
Confidence 99999999999999999765 455666655 356899999996 67555 4555689999999887666554222
Q ss_pred hhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEE
Q psy14906 339 NRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCV 418 (583)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 418 (583)
..|.+.
T Consensus 225 --------------------------------------------------------------------------~nV~SA 230 (334)
T KOG0278|consen 225 --------------------------------------------------------------------------CNVESA 230 (334)
T ss_pred --------------------------------------------------------------------------cccccc
Confidence 568899
Q ss_pred EEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 419 YITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 419 ~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
.++|+...+++|++|..++.||..+++.+..+. .+|.++|.|+.|+|+|...++|+.||+|++|.....
T Consensus 231 SL~P~k~~fVaGged~~~~kfDy~TgeEi~~~n----kgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~ 299 (334)
T KOG0278|consen 231 SLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYN----KGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPG 299 (334)
T ss_pred cccCCCceEEecCcceEEEEEeccCCceeeecc----cCCCCceEEEEECCCCceeeccCCCceEEEEEecCC
Confidence 999999999999999999999999999988853 799999999999999999999999999999998765
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-30 Score=237.04 Aligned_cols=456 Identities=14% Similarity=0.199 Sum_probs=320.5
Q ss_pred CCCCCeEEEEe---eCeEEEEEcCCeEEEEeccc--eeeeeecccC-ccEEEEcc-CCCEEEEEeCCCcEEEEEcCCCcE
Q psy14906 71 QHEDDITCLSS---DFFHIYTSANNIIYAWRRGI--DIVGTYKGHT-SPVHLILP-FGPHLISVDEESNVKVWDIKAEET 143 (583)
Q Consensus 71 ~h~~~v~~~~~---~~~~~~~~~~~~i~vw~~~~--~~~~~~~~h~-~~v~~is~-~~~~l~s~~~dg~i~iwd~~~~~~ 143 (583)
--+.+|+|||+ ++.++++-.+|.|.+|++.. -+...+.+++ ..|.++.. ++..|++.+.+|.|.-||+.++++
T Consensus 23 ~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~ 102 (691)
T KOG2048|consen 23 YKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQ 102 (691)
T ss_pred eeccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccCce
Confidence 35788999999 44677777999999999743 4556667664 45777733 578899999999999999999999
Q ss_pred EEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEE--EeccCCCeEEEEEecCCCCEEE
Q psy14906 144 YLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLME--FIQTWGPVTALSFRTDGPPMMV 221 (583)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~ 221 (583)
+..+. ...+.|++++.+|.+..+++|+.||.+..++...++.... |...++.|.+++|+|++. .++
T Consensus 103 ~~~~d-----------~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~-~i~ 170 (691)
T KOG2048|consen 103 KYNID-----------SNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGT-KIA 170 (691)
T ss_pred eEEec-----------CCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCcc-EEE
Confidence 99998 7789999999999999999999999888888777665543 445568999999999998 799
Q ss_pred EEcCCCcEEEEeCCCCeehh-------hhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCC
Q psy14906 222 SGSNTGHLTVWNLEDRQVEN-------QIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294 (583)
Q Consensus 222 s~~~dg~i~vwd~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~ 294 (583)
+|+.||.|++||..++..+. .+.++...-|.++.|..++ .|++|+..|+|++||.. .+.++.....|.
T Consensus 171 ~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~-tI~sgDS~G~V~FWd~~----~gTLiqS~~~h~ 245 (691)
T KOG2048|consen 171 GGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDS-TIASGDSAGTVTFWDSI----FGTLIQSHSCHD 245 (691)
T ss_pred ecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecC-cEEEecCCceEEEEccc----Ccchhhhhhhhh
Confidence 99999999999999887655 2212233457888888666 68999999999999654 567788888999
Q ss_pred CCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccccccc
Q psy14906 295 APPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDW 374 (583)
Q Consensus 295 ~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (583)
+.|.+++..+ +++++++++.|+.+..+...+....-.. ......+...+..++..
T Consensus 246 adVl~Lav~~-~~d~vfsaGvd~~ii~~~~~~~~~~wv~-----------------~~~r~~h~hdvrs~av~------- 300 (691)
T KOG2048|consen 246 ADVLALAVAD-NEDRVFSAGVDPKIIQYSLTTNKSEWVI-----------------NSRRDLHAHDVRSMAVI------- 300 (691)
T ss_pred cceeEEEEcC-CCCeEEEccCCCceEEEEecCCccceee-----------------eccccCCcccceeeeee-------
Confidence 9999999985 7899999999999999988766431000 00111122223333322
Q ss_pred ccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccC---
Q psy14906 375 NNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYG--- 451 (583)
Q Consensus 375 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--- 451 (583)
+..+..+..|..+.+-........... .+..+ ..-.-+...|.. +++.--....+.+|.+.+......+.
T Consensus 301 ~~~l~sgG~d~~l~i~~s~~~~~~~h~-~~~~~-----p~~~~v~~a~~~-~L~~~w~~h~v~lwrlGS~~~~g~~~~~~ 373 (691)
T KOG2048|consen 301 ENALISGGRDFTLAICSSREFKNMDHR-QKNLF-----PASDRVSVAPEN-RLLVLWKAHGVDLWRLGSVILQGEYNYIH 373 (691)
T ss_pred cceEEecceeeEEEEccccccCchhhh-ccccc-----cccceeecCccc-eEEEEeccccccceeccCcccccccChhh
Confidence 224555555655555444432222221 11110 011122333333 44444445558888877652221110
Q ss_pred -CCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc------CCeeeEEeccCCcEEEEEe-CC
Q psy14906 452 -HDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD------NGISFFRTHQESSMLAVCL-DD 523 (583)
Q Consensus 452 -~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~v~~~~~s~~~~~l~~~~-~d 523 (583)
..........|.+.+.+|+|++++.+.- ..++||.+... ..+...... -....+.|+-|+..++.++ ..
T Consensus 374 Llkl~~k~~~nIs~~aiSPdg~~Ia~st~-~~~~iy~L~~~--~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~~ 450 (691)
T KOG2048|consen 374 LLKLFTKEKENISCAAISPDGNLIAISTV-SRTKIYRLQPD--PNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKNI 450 (691)
T ss_pred heeeecCCccceeeeccCCCCCEEEEeec-cceEEEEeccC--cceeEEEeccchhhhccceeeEEEecCceEEEEeccc
Confidence 0000344567999999999999987764 56889988875 333322221 2577888998998887777 67
Q ss_pred ceEEEEEcccc--ceEEeec--ccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccc
Q psy14906 524 FTVNIIDIDTC--TIIRKLS--GHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578 (583)
Q Consensus 524 g~i~i~d~~~~--~~~~~~~--~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~ 578 (583)
..+.++++++. +.+..+. +-...|..+..||||++||..+.+|.|.+|++++++.
T Consensus 451 ~~le~~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~t~g~I~v~nl~~~~~ 509 (691)
T KOG2048|consen 451 FSLEEFELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAISTRGQIFVYNLETLES 509 (691)
T ss_pred ceeEEEEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEeccceEEEEEccccee
Confidence 78888887654 3332222 2456799999999999999999999999999998764
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=225.42 Aligned_cols=293 Identities=16% Similarity=0.206 Sum_probs=244.3
Q ss_pred ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC--CCeE
Q psy14906 195 ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP--DNTL 272 (583)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--d~~i 272 (583)
++.+.|....+.|+++.|+++|. ++++++.|..+++||..+++.++++ ..+.-.+..++|....+.++.++. |.+|
T Consensus 5 ~~ak~f~~~~~~i~sl~fs~~G~-~litss~dDsl~LYd~~~g~~~~ti-~skkyG~~~~~Fth~~~~~i~sStk~d~tI 82 (311)
T KOG1446|consen 5 RPAKVFRETNGKINSLDFSDDGL-LLITSSEDDSLRLYDSLSGKQVKTI-NSKKYGVDLACFTHHSNTVIHSSTKEDDTI 82 (311)
T ss_pred ccccccccCCCceeEEEecCCCC-EEEEecCCCeEEEEEcCCCceeeEe-ecccccccEEEEecCCceEEEccCCCCCce
Confidence 44455666668999999999999 8888999999999999999999999 677778999999888777777776 8899
Q ss_pred EEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcc
Q psy14906 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKM 352 (583)
Q Consensus 273 ~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (583)
+..++. ..+.++.+.||...|.+++.+| -++.+++++.|++|++||++..++...+..
T Consensus 83 ryLsl~----dNkylRYF~GH~~~V~sL~~sP-~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~----------------- 140 (311)
T KOG1446|consen 83 RYLSLH----DNKYLRYFPGHKKRVNSLSVSP-KDDTFLSSSLDKTVRLWDLRVKKCQGLLNL----------------- 140 (311)
T ss_pred EEEEee----cCceEEEcCCCCceEEEEEecC-CCCeEEecccCCeEEeeEecCCCCceEEec-----------------
Confidence 999776 6789999999999999999999 468999999999999999997766443311
Q ss_pred ccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec
Q psy14906 353 NEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS 432 (583)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 432 (583)
..-..++|+|.|-++|++..
T Consensus 141 ------------------------------------------------------------~~~pi~AfDp~GLifA~~~~ 160 (311)
T KOG1446|consen 141 ------------------------------------------------------------SGRPIAAFDPEGLIFALANG 160 (311)
T ss_pred ------------------------------------------------------------CCCcceeECCCCcEEEEecC
Confidence 23456899999999999999
Q ss_pred CceEEEEEcccC--ccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccC----Cee
Q psy14906 433 SGHVDRFNIQSG--AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN----GIS 506 (583)
Q Consensus 433 dg~i~i~d~~~~--~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----~v~ 506 (583)
.+.|++||++.- .+...+... .+.....+.+.|+|||++++.+...+.+++.|.-.+ ..+..+.... -..
T Consensus 161 ~~~IkLyD~Rs~dkgPF~tf~i~--~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G--~~~~tfs~~~~~~~~~~ 236 (311)
T KOG1446|consen 161 SELIKLYDLRSFDKGPFTTFSIT--DNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDG--TVKSTFSGYPNAGNLPL 236 (311)
T ss_pred CCeEEEEEecccCCCCceeEccC--CCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCC--cEeeeEeeccCCCCcce
Confidence 889999999854 334444332 356778999999999999999999999999999998 7776665542 225
Q ss_pred eEEeccCCcEEEEEeCCceEEEEEccccceEEeecc-cccceeeEEecCCCcEEEEEeCCCeEEEEeCCCcc
Q psy14906 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG-HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 507 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~ 577 (583)
...|+||++++.+|+.||+|.+|++++++.+..+++ +..++.++.|+|.-..++|+ +..+-+|=....+
T Consensus 237 ~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa--~s~l~fw~p~~~~ 306 (311)
T KOG1446|consen 237 SATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSA--SSNLVFWLPDEDA 306 (311)
T ss_pred eEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeec--CceEEEEeccccc
Confidence 778999999999999999999999999999999998 68999999999987777766 4668888765443
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=249.39 Aligned_cols=286 Identities=19% Similarity=0.259 Sum_probs=245.2
Q ss_pred CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe--ehhhhhhccccceEEEEEecCCCEEEEEeCCCe
Q psy14906 194 DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ--VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271 (583)
Q Consensus 194 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 271 (583)
......+..|.+.+..+.|-++.. .|++|+.|..|++|+....+ ...++ .+..+.|+++.|.++++++++++.|+.
T Consensus 165 S~~~~~ld~h~gev~~v~~l~~sd-tlatgg~Dr~Ik~W~v~~~k~~~~~tL-aGs~g~it~~d~d~~~~~~iAas~d~~ 242 (459)
T KOG0288|consen 165 SRALFVLDAHEGEVHDVEFLRNSD-TLATGGSDRIIKLWNVLGEKSELISTL-AGSLGNITSIDFDSDNKHVIAASNDKN 242 (459)
T ss_pred hhhhhhhhccccccceeEEccCcc-hhhhcchhhhhhhhhcccchhhhhhhh-hccCCCcceeeecCCCceEEeecCCCc
Confidence 344556678999999999999966 79999999999999998766 66677 788889999999999999999999999
Q ss_pred EEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhc
Q psy14906 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEK 351 (583)
Q Consensus 272 i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (583)
+++|+++ ..+...++.+|++.|+++.|.. ....+++++.|.+|+.||+....+.+++-..
T Consensus 243 ~r~Wnvd----~~r~~~TLsGHtdkVt~ak~~~-~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~--------------- 302 (459)
T KOG0288|consen 243 LRLWNVD----SLRLRHTLSGHTDKVTAAKFKL-SHSRVVSGSADRTIKLWDLQKAYCSKTVLPG--------------- 302 (459)
T ss_pred eeeeecc----chhhhhhhcccccceeeehhhc-cccceeeccccchhhhhhhhhhheecccccc---------------
Confidence 9999887 6788899999999999999985 5555999999999999999988776654221
Q ss_pred cccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe
Q psy14906 352 MNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY 431 (583)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 431 (583)
..+..++.+ +..+++|.
T Consensus 303 -------------------------------------------------------------S~cnDI~~~--~~~~~SgH 319 (459)
T KOG0288|consen 303 -------------------------------------------------------------SQCNDIVCS--ISDVISGH 319 (459)
T ss_pred -------------------------------------------------------------ccccceEec--ceeeeecc
Confidence 233344443 56788899
Q ss_pred cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeec-----cCCee
Q psy14906 432 SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL-----DNGIS 506 (583)
Q Consensus 432 ~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~v~ 506 (583)
.|++|++||.++....... +.+ +.|+++..++++..|.+++.|.++.+.|+.+. .....+.. ....+
T Consensus 320 ~DkkvRfwD~Rs~~~~~sv-----~~g-g~vtSl~ls~~g~~lLsssRDdtl~viDlRt~--eI~~~~sA~g~k~asDwt 391 (459)
T KOG0288|consen 320 FDKKVRFWDIRSADKTRSV-----PLG-GRVTSLDLSMDGLELLSSSRDDTLKVIDLRTK--EIRQTFSAEGFKCASDWT 391 (459)
T ss_pred cccceEEEeccCCceeeEe-----ecC-cceeeEeeccCCeEEeeecCCCceeeeecccc--cEEEEeeccccccccccc
Confidence 9999999999999988887 344 49999999999999999999999999999988 65555543 34688
Q ss_pred eEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccc--eeeEEecCCCcEEEEEeCCCeEEEEe
Q psy14906 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ--LTDADFSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 507 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~--v~~l~~s~d~~~l~s~~~d~~i~vw~ 572 (583)
.+.|||++.|+|+|+.||.|+||++.++++...+...... |++++|+|.|..|++++.++.+.+|.
T Consensus 392 rvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 392 RVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred eeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 9999999999999999999999999999999888765554 99999999999999999999999993
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-33 Score=243.68 Aligned_cols=284 Identities=19% Similarity=0.250 Sum_probs=240.0
Q ss_pred cCCcceEEEeeCCCCC-EEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 160 RWNSCVNVLEPSPVVD-IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
.....|.+++|+|... -+|+.+. -.+.||+..+....+++......|.++.|..||+ +|++|+..|.|+|||+.+..
T Consensus 24 ke~~~vssl~fsp~~P~d~aVt~S-~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~-LlaaGD~sG~V~vfD~k~r~ 101 (487)
T KOG0310|consen 24 KEHNSVSSLCFSPKHPYDFAVTSS-VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGR-LLAAGDESGHVKVFDMKSRV 101 (487)
T ss_pred cccCcceeEecCCCCCCceEEecc-cEEEEEecchhhhhhhHHhhccceeEEEeecCCe-EEEccCCcCcEEEeccccHH
Confidence 3457899999999654 3444443 4799999998888887777779999999999999 99999999999999977766
Q ss_pred ehhhhhhccccceEEEEEecCC-CEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC
Q psy14906 239 VENQIKKAHRKVVTGAHFLYNE-PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS 317 (583)
Q Consensus 239 ~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 317 (583)
.++.+ .+|+.++..+.|+|++ ..|++|+.|+.+++||++. ......+.+|++.|.+.+++|.++.++++|+.||
T Consensus 102 iLR~~-~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~----a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg 176 (487)
T KOG0310|consen 102 ILRQL-YAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLST----AYVQAELSGHTDYVRCGDISPANDHIVVTGSYDG 176 (487)
T ss_pred HHHHH-hhccCceeEEEecccCCeEEEecCCCceEEEEEcCC----cEEEEEecCCcceeEeeccccCCCeEEEecCCCc
Confidence 77888 8999999999999975 4678888899999997763 3346688999999999999998888999999999
Q ss_pred cEEEEEccccc-cceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccc
Q psy14906 318 TLRIFNTKSET-SNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSK 396 (583)
Q Consensus 318 ~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 396 (583)
.|++||++... .+.++
T Consensus 177 ~vrl~DtR~~~~~v~el--------------------------------------------------------------- 193 (487)
T KOG0310|consen 177 KVRLWDTRSLTSRVVEL--------------------------------------------------------------- 193 (487)
T ss_pred eEEEEEeccCCceeEEe---------------------------------------------------------------
Confidence 99999998752 22222
Q ss_pred ccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEE
Q psy14906 397 MDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476 (583)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 476 (583)
.|..+|..+.+-|.|..+++++.+ .|++||+.+|....... ..|...|+|+.+..++..|++
T Consensus 194 -------------nhg~pVe~vl~lpsgs~iasAgGn-~vkVWDl~~G~qll~~~----~~H~KtVTcL~l~s~~~rLlS 255 (487)
T KOG0310|consen 194 -------------NHGCPVESVLALPSGSLIASAGGN-SVKVWDLTTGGQLLTSM----FNHNKTVTCLRLASDSTRLLS 255 (487)
T ss_pred -------------cCCCceeeEEEcCCCCEEEEcCCC-eEEEEEecCCceehhhh----hcccceEEEEEeecCCceEee
Confidence 122689999999999999998765 49999999665544331 459999999999999999999
Q ss_pred eecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccc
Q psy14906 477 GGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533 (583)
Q Consensus 477 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 533 (583)
++-|+.+++||+.+. +.+..+..+++|.+++.+|+++.+++|..+|.+.+-+...
T Consensus 256 ~sLD~~VKVfd~t~~--Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~~ 310 (487)
T KOG0310|consen 256 GSLDRHVKVFDTTNY--KVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSIRRREV 310 (487)
T ss_pred cccccceEEEEccce--EEEEeeecccceeeEEecCCCceEEEecccceeeeehhhc
Confidence 999999999998888 8999999999999999999999999999999888775443
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=221.27 Aligned_cols=287 Identities=18% Similarity=0.273 Sum_probs=243.2
Q ss_pred EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhh-hhccccceEEEEEecC-CCEEEEEeCCCeEEEE
Q psy14906 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI-KKAHRKVVTGAHFLYN-EPLLVTSSPDNTLKLW 275 (583)
Q Consensus 198 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~~w 275 (583)
+.+++|...+.+++|+-+|. .|++|+.|+++.+|+++..+..... ..+|.+.|-.++|.|. ..+|++++.|.+|++|
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~-~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~w 92 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGT-KLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIW 92 (313)
T ss_pred HHhhhhhhcceEEEEcccCc-eeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEE
Confidence 44668889999999999999 8999999999999999877655443 2678889999999875 4689999999999999
Q ss_pred EccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccc
Q psy14906 276 IFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEK 355 (583)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (583)
|+. ..++........+. ..+.|+| ++.+++.+..|..|.+.|.++.+........
T Consensus 93 d~r----~~k~~~~i~~~~en-i~i~wsp-~g~~~~~~~kdD~it~id~r~~~~~~~~~~~------------------- 147 (313)
T KOG1407|consen 93 DIR----SGKCTARIETKGEN-INITWSP-DGEYIAVGNKDDRITFIDARTYKIVNEEQFK------------------- 147 (313)
T ss_pred Eec----cCcEEEEeeccCcc-eEEEEcC-CCCEEEEecCcccEEEEEecccceeehhccc-------------------
Confidence 775 45555555544343 4678998 8999999999999999999886654332111
Q ss_pred cCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCce
Q psy14906 356 FILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGH 435 (583)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 435 (583)
..+..++|+.++.+++..+..|.
T Consensus 148 ---------------------------------------------------------~e~ne~~w~~~nd~Fflt~GlG~ 170 (313)
T KOG1407|consen 148 ---------------------------------------------------------FEVNEISWNNSNDLFFLTNGLGC 170 (313)
T ss_pred ---------------------------------------------------------ceeeeeeecCCCCEEEEecCCce
Confidence 34677889988889888888999
Q ss_pred EEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee-ccCCeeeEEeccCC
Q psy14906 436 VDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQES 514 (583)
Q Consensus 436 i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~~~ 514 (583)
|.|.....-+++..+ .+|.....||.|+|+|+++|+|+.|..+.+||++.. -+++.+. +.-+|..+.||.||
T Consensus 171 v~ILsypsLkpv~si-----~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~EL--iC~R~isRldwpVRTlSFS~dg 243 (313)
T KOG1407|consen 171 VEILSYPSLKPVQSI-----KAHPSNCICIEFDPDGRYFATGSADALVSLWDVDEL--ICERCISRLDWPVRTLSFSHDG 243 (313)
T ss_pred EEEEecccccccccc-----ccCCcceEEEEECCCCceEeeccccceeeccChhHh--hhheeeccccCceEEEEeccCc
Confidence 999999998888888 899999999999999999999999999999999987 7777775 55699999999999
Q ss_pred cEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCC---------CeEEEEeCCC
Q psy14906 515 SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMD---------CTIRVWDIPS 575 (583)
Q Consensus 515 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d---------~~i~vw~~~~ 575 (583)
++||++++|..|-|-++++|..+..++ +.++...++|+|...+||-++.| |.++++-+.+
T Consensus 244 ~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~~~ 312 (313)
T KOG1407|consen 244 RMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGLSN 312 (313)
T ss_pred ceeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCCCceeeEEecCCCCccccccceeEEecCCC
Confidence 999999999999999999999999988 78999999999999999988755 5778776643
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=262.06 Aligned_cols=278 Identities=21% Similarity=0.303 Sum_probs=247.8
Q ss_pred eecCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEee-cCCCCCCeEEEEee---CeEEEEEcCCeEEEEec-cce
Q psy14906 28 VSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSV-SPQHEDDITCLSSD---FFHIYTSANNIIYAWRR-GID 102 (583)
Q Consensus 28 ~~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~-~~~h~~~v~~~~~~---~~~~~~~~~~~i~vw~~-~~~ 102 (583)
+..+...+.+++ +..+++.+.+..|.+||..++..+.. +.||.+.|.++++. +.+++++.|.++++||. .++
T Consensus 206 ~~~~~~~~~q~~---~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~ 282 (537)
T KOG0274|consen 206 TDDHVVLCLQLH---DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGE 282 (537)
T ss_pred cCcchhhhheee---cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCc
Confidence 445566666775 56667777899999999999999988 99999999999984 47888899999999996 689
Q ss_pred eeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec
Q psy14906 103 IVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS 182 (583)
Q Consensus 103 ~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 182 (583)
+..++.+|...|.++.-.+.++++|+.|.+|++|+++++.++..+. +|..+|.++..+ +.++++|+.
T Consensus 283 C~~~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~-----------~h~~~V~~v~~~--~~~lvsgs~ 349 (537)
T KOG0274|consen 283 CTHSLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACLNLLR-----------GHTGPVNCVQLD--EPLLVSGSY 349 (537)
T ss_pred EEEEecCCCceEEEEEccCceEeeccCCceEEEEeccCcceEEEec-----------cccccEEEEEec--CCEEEEEec
Confidence 9999999999999999999999999999999999999999999997 799999999998 889999999
Q ss_pred CCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC-eehhhhhhccccceEEEEEecCCC
Q psy14906 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR-QVENQIKKAHRKVVTGAHFLYNEP 261 (583)
Q Consensus 183 d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~ 261 (583)
|++|++||+.+++++..+.+|...|+++.+.+. . .+++|+.|++|++||+++. +++..+ .+|..-+..+.+ .++
T Consensus 350 d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~-~~~Sgs~D~~IkvWdl~~~~~c~~tl-~~h~~~v~~l~~--~~~ 424 (537)
T KOG0274|consen 350 DGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-N-RLLSGSLDTTIKVWDLRTKRKCIHTL-QGHTSLVSSLLL--RDN 424 (537)
T ss_pred CceEEEEEhhhceeeeeecCCcceEEEEEecCc-c-eEEeeeeccceEeecCCchhhhhhhh-cCCccccccccc--ccc
Confidence 999999999999999999999999999988775 4 7999999999999999999 899999 899998876665 678
Q ss_pred EEEEEeCCCeEEEEEccCCCCCceeeEEecc-CCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceee
Q psy14906 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREG-HSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 262 ~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 333 (583)
+|++++.|++|++||.. ++.+++.+.+ |...|..+++. ...+++++.||++++||++++...+.+
T Consensus 425 ~Lvs~~aD~~Ik~WD~~----~~~~~~~~~~~~~~~v~~l~~~---~~~il~s~~~~~~~l~dl~~~~~~~~l 490 (537)
T KOG0274|consen 425 FLVSSSADGTIKLWDAE----EGECLRTLEGRHVGGVSALALG---KEEILCSSDDGSVKLWDLRSGTLIRTL 490 (537)
T ss_pred eeEeccccccEEEeecc----cCceeeeeccCCcccEEEeecC---cceEEEEecCCeeEEEecccCchhhhh
Confidence 99999999999999765 6678888887 66778777764 468999999999999999999887755
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=223.12 Aligned_cols=280 Identities=20% Similarity=0.310 Sum_probs=226.7
Q ss_pred EEEeeCCC-CCEEEEEe-------cCCeEEEEEccCCceeEEEe--ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q psy14906 166 NVLEPSPV-VDIIGVGL-------SNKKIILHNILTDESLMEFI--QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 166 ~~~~~s~~-~~~l~~~~-------~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 235 (583)
.++.|||- .++||++. ..|.+.|.++...+-+..+. .-.+.+..++|+++....+++++.||++++||+.
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~ 91 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT 91 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence 56889982 33444432 46899999997555554443 2237899999999988799999999999999975
Q ss_pred C-CeehhhhhhccccceEEEEEecC-CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEe
Q psy14906 236 D-RQVENQIKKAHRKVVTGAHFLYN-EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSA 313 (583)
Q Consensus 236 ~-~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 313 (583)
. ..++..+ +.|..+|.++.|++. +..+++++.|++|++|+.+ .+..+.++.+|..-|....|+|..++.++++
T Consensus 92 ~~s~Pi~~~-kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~----r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~ 166 (311)
T KOG0277|consen 92 MPSKPIHKF-KEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPN----RPNSVQTFNGHNSCIYQAAFSPHIPNLFASA 166 (311)
T ss_pred CCCcchhHH-HhhhhheEEeccccccceeEEeeccCCceEeecCC----CCcceEeecCCccEEEEEecCCCCCCeEEEc
Confidence 4 3577778 899999999999985 4567888999999999665 4567888999999999999999999999999
Q ss_pred eCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecC
Q psy14906 314 AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFY 393 (583)
Q Consensus 314 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 393 (583)
+.|+++++||++...
T Consensus 167 Sgd~~l~lwdvr~~g----------------------------------------------------------------- 181 (311)
T KOG0277|consen 167 SGDGTLRLWDVRSPG----------------------------------------------------------------- 181 (311)
T ss_pred cCCceEEEEEecCCC-----------------------------------------------------------------
Confidence 999999999976421
Q ss_pred cccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC-CCc
Q psy14906 394 KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN-LNQ 472 (583)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~ 472 (583)
+. +. + ..|...|.++.|+. +.+
T Consensus 182 -------------------------------k~--------------------~~-i-----~ah~~Eil~cdw~ky~~~ 204 (311)
T KOG0277|consen 182 -------------------------------KF--------------------MS-I-----EAHNSEILCCDWSKYNHN 204 (311)
T ss_pred -------------------------------ce--------------------eE-E-----EeccceeEeecccccCCc
Confidence 00 01 1 57888899999987 667
Q ss_pred EEEEeecCCcEEEEEccCCCCCceEEee-ccCCeeeEEeccCCc-EEEEEeCCceEEEEEcccc-ceEEeecccccceee
Q psy14906 473 IVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESS-MLAVCLDDFTVNIIDIDTC-TIIRKLSGHMGQLTD 549 (583)
Q Consensus 473 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~-~~~~~~~~h~~~v~~ 549 (583)
+|+||+.|+.|+.||++... .++..+. |.-.|..+.|||... +||+++.|-+++|||...+ ..+.+...|..-+..
T Consensus 205 vl~Tg~vd~~vr~wDir~~r-~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g 283 (311)
T KOG0277|consen 205 VLATGGVDNLVRGWDIRNLR-TPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCG 283 (311)
T ss_pred EEEecCCCceEEEEehhhcc-ccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccchhhhhhhhccceEEec
Confidence 89999999999999999874 4444444 445899999999654 8999999999999999844 456677789999999
Q ss_pred EEecC-CCcEEEEEeCCCeEEEEeC
Q psy14906 550 ADFSP-DSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 550 l~~s~-d~~~l~s~~~d~~i~vw~~ 573 (583)
+.||+ +..++|+++.|+.++||+-
T Consensus 284 ~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 284 LDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred cccccccCceeeecccccceeeecc
Confidence 99998 6779999999999999984
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=218.51 Aligned_cols=274 Identities=14% Similarity=0.175 Sum_probs=232.5
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEE--EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLME--FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR 237 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 237 (583)
+|...+.+++|+.+|..|++|+.|+++.+|++...+.... ..+|.+.|-.++|.|..+.++++++.|.+|++||.+.+
T Consensus 18 ~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~ 97 (313)
T KOG1407|consen 18 GHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSG 97 (313)
T ss_pred hhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccC
Confidence 7889999999999999999999999999999987755544 45888899999999988879999999999999999999
Q ss_pred eehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC
Q psy14906 238 QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS 317 (583)
Q Consensus 238 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 317 (583)
++...+ ....+. .-+.|+|+|++++.++.|..|...|.. +.+..... .....+..++|+ .++++++.....|
T Consensus 98 k~~~~i-~~~~en-i~i~wsp~g~~~~~~~kdD~it~id~r----~~~~~~~~-~~~~e~ne~~w~-~~nd~Fflt~GlG 169 (313)
T KOG1407|consen 98 KCTARI-ETKGEN-INITWSPDGEYIAVGNKDDRITFIDAR----TYKIVNEE-QFKFEVNEISWN-NSNDLFFLTNGLG 169 (313)
T ss_pred cEEEEe-eccCcc-eEEEEcCCCCEEEEecCcccEEEEEec----ccceeehh-cccceeeeeeec-CCCCEEEEecCCc
Confidence 998888 333334 457899999999999999999999654 22333322 234467788898 5777777777779
Q ss_pred cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccc
Q psy14906 318 TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKM 397 (583)
Q Consensus 318 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 397 (583)
+|.|.....-+++..+
T Consensus 170 ~v~ILsypsLkpv~si---------------------------------------------------------------- 185 (313)
T KOG1407|consen 170 CVEILSYPSLKPVQSI---------------------------------------------------------------- 185 (313)
T ss_pred eEEEEecccccccccc----------------------------------------------------------------
Confidence 9998887654433322
Q ss_pred cceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEe
Q psy14906 398 DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISG 477 (583)
Q Consensus 398 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 477 (583)
..|.....|+.|+|+|+++|+|+.|..+.+||+..--+.+.+ ..+.-+|+.+.|+.||++||++
T Consensus 186 -----------~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~i-----sRldwpVRTlSFS~dg~~lASa 249 (313)
T KOG1407|consen 186 -----------KAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCI-----SRLDWPVRTLSFSHDGRMLASA 249 (313)
T ss_pred -----------ccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheee-----ccccCceEEEEeccCcceeecc
Confidence 233467889999999999999999999999999998888888 7899999999999999999999
Q ss_pred ecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCC
Q psy14906 478 GNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDD 523 (583)
Q Consensus 478 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 523 (583)
++|..|-|=+++++ ..+..++..++...++|+|...+||.++.|
T Consensus 250 SEDh~IDIA~vetG--d~~~eI~~~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 250 SEDHFIDIAEVETG--DRVWEIPCEGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred CccceEEeEecccC--CeEEEeeccCCceeEEecCCCceeeEEecC
Confidence 99999999999999 999999999999999999999999988775
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=249.11 Aligned_cols=270 Identities=16% Similarity=0.206 Sum_probs=237.1
Q ss_pred CEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEe
Q psy14906 122 PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI 201 (583)
Q Consensus 122 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 201 (583)
+.||.| .+..|++|+..+++...... .+...|+++.|+++|++||+|..+|.|.|||..+.+.+..+.
T Consensus 189 n~laVa-lg~~vylW~~~s~~v~~l~~-----------~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~ 256 (484)
T KOG0305|consen 189 NVLAVA-LGQSVYLWSASSGSVTELCS-----------FGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLR 256 (484)
T ss_pred CeEEEE-ecceEEEEecCCCceEEeEe-----------cCCCceEEEEECCCCCEEEEeecCCeEEEEehhhcccccccc
Confidence 456555 46789999999998666665 337899999999999999999999999999999999999999
Q ss_pred c-cCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q psy14906 202 Q-TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA 280 (583)
Q Consensus 202 ~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~ 280 (583)
+ |...|-+++|... .+.+|+.++.|..+|++..+.......+|...|..+.|++|+++||+|+.|+.+.|||..
T Consensus 257 ~~h~~rvg~laW~~~---~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~-- 331 (484)
T KOG0305|consen 257 GSHASRVGSLAWNSS---VLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGL-- 331 (484)
T ss_pred CCcCceeEEEeccCc---eEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCC--
Confidence 8 9999999999933 799999999999999998876666338999999999999999999999999999999663
Q ss_pred CCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee--CCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCC
Q psy14906 281 DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA--GDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFIL 358 (583)
Q Consensus 281 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (583)
...+...+..|.+.|..++|+|-....|++|+ .|+.|++||..++..+..+...
T Consensus 332 --~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtg---------------------- 387 (484)
T KOG0305|consen 332 --SPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTG---------------------- 387 (484)
T ss_pred --CccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccC----------------------
Confidence 55677888899999999999998889999886 4999999999988776544221
Q ss_pred CccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEE--EecCceE
Q psy14906 359 PPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLI--GYSSGHV 436 (583)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~--~~~dg~i 436 (583)
.+|.++.|++..+-+++ |..++.|
T Consensus 388 ------------------------------------------------------sQVcsL~Wsk~~kEi~sthG~s~n~i 413 (484)
T KOG0305|consen 388 ------------------------------------------------------SQVCSLIWSKKYKELLSTHGYSENQI 413 (484)
T ss_pred ------------------------------------------------------CceeeEEEcCCCCEEEEecCCCCCcE
Confidence 68999999999877666 5667899
Q ss_pred EEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 437 DRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 437 ~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
.||+..+.+.+..+ .+|...|..++++|||..+++|+.|.++++|++-..
T Consensus 414 ~lw~~ps~~~~~~l-----~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 414 TLWKYPSMKLVAEL-----LGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred EEEeccccceeeee-----cCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 99999998888888 899999999999999999999999999999999774
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=249.85 Aligned_cols=279 Identities=16% Similarity=0.311 Sum_probs=237.9
Q ss_pred ceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhh
Q psy14906 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI 243 (583)
Q Consensus 164 ~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 243 (583)
...-+.|+ ..+.||+|.. ..|++|+..+++.......+...|+++.|+++|. +|++|..+|.|.|||..+.+.+..+
T Consensus 179 Y~nlldWs-s~n~laValg-~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~-~LavG~~~g~v~iwD~~~~k~~~~~ 255 (484)
T KOG0305|consen 179 YLNLLDWS-SANVLAVALG-QSVYLWSASSGSVTELCSFGEELVTSVKWSPDGS-HLAVGTSDGTVQIWDVKEQKKTRTL 255 (484)
T ss_pred hhhHhhcc-cCCeEEEEec-ceEEEEecCCCceEEeEecCCCceEEEEECCCCC-EEEEeecCCeEEEEehhhccccccc
Confidence 34456777 4557777755 4799999999987777766679999999999999 9999999999999999999999999
Q ss_pred hhc-cccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEE
Q psy14906 244 KKA-HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322 (583)
Q Consensus 244 ~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 322 (583)
.+ |...|-+++|. +..+.+|+.|+.|..+|+.... .....+.+|...|..+.|++ |+.++++|+.|+.+.||
T Consensus 256 -~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~---~~~~~~~~H~qeVCgLkws~-d~~~lASGgnDN~~~Iw 328 (484)
T KOG0305|consen 256 -RGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQ---HVVSTLQGHRQEVCGLKWSP-DGNQLASGGNDNVVFIW 328 (484)
T ss_pred -cCCcCceeEEEecc--CceEEEecCCCcEEEEEEecch---hhhhhhhcccceeeeeEECC-CCCeeccCCCccceEec
Confidence 56 99999999997 6789999999999999886532 22224888999999999997 89999999999999999
Q ss_pred EccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceee
Q psy14906 323 NTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFL 402 (583)
Q Consensus 323 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 402 (583)
|.....
T Consensus 329 d~~~~~-------------------------------------------------------------------------- 334 (484)
T KOG0305|consen 329 DGLSPE-------------------------------------------------------------------------- 334 (484)
T ss_pred cCCCcc--------------------------------------------------------------------------
Confidence 863221
Q ss_pred ecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC-CCcEEEEee--c
Q psy14906 403 VPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN-LNQIVISGG--N 479 (583)
Q Consensus 403 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~--~ 479 (583)
+...+ ..|...|.+++|+| ...+||+|+ .
T Consensus 335 -------------------------------------------p~~~~-----~~H~aAVKA~awcP~q~~lLAsGGGs~ 366 (484)
T KOG0305|consen 335 -------------------------------------------PKFTF-----TEHTAAVKALAWCPWQSGLLATGGGSA 366 (484)
T ss_pred -------------------------------------------ccEEE-----eccceeeeEeeeCCCccCceEEcCCCc
Confidence 12222 58999999999999 456888876 6
Q ss_pred CCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEE--EeCCceEEEEEccccceEEeecccccceeeEEecCCCc
Q psy14906 480 DQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAV--CLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSR 557 (583)
Q Consensus 480 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~ 557 (583)
|+.|++||..++ ..+..+.....|..+.|++..+-|++ |..++.|.||+..+.+.+..+.+|..+|..+++||||.
T Consensus 367 D~~i~fwn~~~g--~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~ 444 (484)
T KOG0305|consen 367 DRCIKFWNTNTG--ARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGE 444 (484)
T ss_pred ccEEEEEEcCCC--cEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCC
Confidence 999999999999 99999999999999999999976665 45678999999999999999999999999999999999
Q ss_pred EEEEEeCCCeEEEEeCCCc
Q psy14906 558 WLITASMDCTIRVWDIPSS 576 (583)
Q Consensus 558 ~l~s~~~d~~i~vw~~~~~ 576 (583)
.+++|+.|.++++|++-+.
T Consensus 445 ~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 445 TIVTGAADETLRFWNLFDE 463 (484)
T ss_pred EEEEecccCcEEeccccCC
Confidence 9999999999999998763
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-33 Score=222.29 Aligned_cols=276 Identities=13% Similarity=0.196 Sum_probs=227.6
Q ss_pred cEEEEEeCCCceE-EEEe------eCCeEEEEecCCcEEEeecC--CCCCCeEEEEe----eCeEEEEEcCCeEEEEecc
Q psy14906 34 VVARFIRRRKETL-FVTC------VGKAFHVYGCNHFKLLSVSP--QHEDDITCLSS----DFFHIYTSANNIIYAWRRG 100 (583)
Q Consensus 34 ~~~~~~p~~~~~~-i~~~------~~~~i~v~d~~~~~~~~~~~--~h~~~v~~~~~----~~~~~~~~~~~~i~vw~~~ 100 (583)
..++|+|--...+ ++++ ..+.+.|-+++..+-+..+. .-.+.+..+++ +..+++++.||++++||..
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~ 91 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT 91 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence 4566777443333 3322 47789999987544443332 35677788887 3478899999999999963
Q ss_pred --ceeeeeecccCccEEEEc---cCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCC-CC
Q psy14906 101 --IDIVGTYKGHTSPVHLIL---PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSP-VV 174 (583)
Q Consensus 101 --~~~~~~~~~h~~~v~~is---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~ 174 (583)
..+++.++.|...|.++. -+++.+++++.|++|++|+...+.-+.++. +|...|...+|+| ..
T Consensus 92 ~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~-----------gh~~~Iy~a~~sp~~~ 160 (311)
T KOG0277|consen 92 MPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFN-----------GHNSCIYQAAFSPHIP 160 (311)
T ss_pred CCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeec-----------CCccEEEEEecCCCCC
Confidence 468899999999999992 345677788999999999999999999987 9999999999999 57
Q ss_pred CEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC-eehhhhhhccccceEE
Q psy14906 175 DIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR-QVENQIKKAHRKVVTG 253 (583)
Q Consensus 175 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~v~~ 253 (583)
+++++++.|+.+++||++.......+..|...+.++.|+.-.+++|++|+.|+.|+.||+++- .++..+ .+|.-.|..
T Consensus 161 nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL-~gh~~AVRk 239 (311)
T KOG0277|consen 161 NLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFEL-NGHGLAVRK 239 (311)
T ss_pred CeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceee-cCCceEEEE
Confidence 899999999999999998655555589998899999999988889999999999999999875 456677 899999999
Q ss_pred EEEecCC-CEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEc
Q psy14906 254 AHFLYNE-PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324 (583)
Q Consensus 254 ~~~~~~~-~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 324 (583)
+.|||.. ..|++++.|-++++||.... ...+.+...|+..+..+.|++.++.++++++.|+.+++|+.
T Consensus 240 vk~Sph~~~lLaSasYDmT~riw~~~~~---ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 240 VKFSPHHASLLASASYDMTVRIWDPERQ---DSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred EecCcchhhHhhhccccceEEecccccc---hhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 9999974 58999999999999976532 34455667899999999999988999999999999999984
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=241.90 Aligned_cols=305 Identities=17% Similarity=0.184 Sum_probs=238.2
Q ss_pred ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC----eehhhhhhccccceEEEEEecCCCEEEEEeCCC
Q psy14906 195 ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR----QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN 270 (583)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 270 (583)
.....+.+|+..|.++++.|.|. .|++|+.|.+|++||+... +..+.+.......|.++.|++.|..|++.+...
T Consensus 158 shEi~l~hgtk~Vsal~~Dp~Ga-R~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~a 236 (641)
T KOG0772|consen 158 SHEIQLKHGTKIVSALAVDPSGA-RFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSA 236 (641)
T ss_pred cceEeccCCceEEEEeeecCCCc-eeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCc
Confidence 34456778989999999999999 8999999999999999753 223334344566899999999999999988888
Q ss_pred eEEEEEccCCCC--------CceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhh
Q psy14906 271 TLKLWIFDKADG--------NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNN 342 (583)
Q Consensus 271 ~i~~w~~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 342 (583)
..+|+|-+...- -..-+..-+||...+++.+|+|.+...+++++.||++++||+...+....+
T Consensus 237 qakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qV--------- 307 (641)
T KOG0772|consen 237 QAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQV--------- 307 (641)
T ss_pred ceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeE---------
Confidence 999996542110 001112346899999999999988899999999999999999875432211
Q ss_pred hhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc
Q psy14906 343 LKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH 422 (583)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 422 (583)
+.. .......-.++.++|++
T Consensus 308 -----------------------------------------------ik~-------------k~~~g~Rv~~tsC~~nr 327 (641)
T KOG0772|consen 308 -----------------------------------------------IKT-------------KPAGGKRVPVTSCAWNR 327 (641)
T ss_pred -----------------------------------------------Eee-------------ccCCCcccCceeeecCC
Confidence 000 00001125789999999
Q ss_pred CCcEEEEEecCceEEEEEcccCccccccCCCCCCCccc--CeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEe-
Q psy14906 423 CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVG--GVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI- 499 (583)
Q Consensus 423 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~- 499 (583)
||+++|+|..||.|.+|+..+......+... .+|.. .|+||.||+||++|++-+.|+++++||++... +++...
T Consensus 328 dg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk--~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k-kpL~~~t 404 (641)
T KOG0772|consen 328 DGKLIAAGCLDGSIQIWDKGSRTVRPVMKVK--DAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK-KPLNVRT 404 (641)
T ss_pred CcchhhhcccCCceeeeecCCcccccceEee--eccCCCCceeEEEeccccchhhhccCCCceeeeeccccc-cchhhhc
Confidence 9999999999999999998544333222222 57877 99999999999999999999999999999875 333322
Q ss_pred --eccCCeeeEEeccCCcEEEEEeC------CceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEE
Q psy14906 500 --KLDNGISFFRTHQESSMLAVCLD------DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571 (583)
Q Consensus 500 --~~~~~v~~~~~s~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw 571 (583)
....+-+.++|||+.+++++|.. .|.+.+||..+.+.+..+.-....|..+.|+|.=+.|..++.||+++|+
T Consensus 405 gL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 405 GLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred CCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCceEEE
Confidence 23347788999999999999864 5789999999999998888778889999999988888889999999986
Q ss_pred e
Q psy14906 572 D 572 (583)
Q Consensus 572 ~ 572 (583)
=
T Consensus 485 Y 485 (641)
T KOG0772|consen 485 Y 485 (641)
T ss_pred E
Confidence 3
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-32 Score=256.89 Aligned_cols=285 Identities=22% Similarity=0.319 Sum_probs=245.9
Q ss_pred cCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEE-eeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEE
Q psy14906 110 HTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLE-LSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIIL 188 (583)
Q Consensus 110 h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~i 188 (583)
|...+.+.-..+.++++++.+++|++||..++..+.. +. +|.+.|.+++|..-+..|++|+.|.++++
T Consensus 207 ~~~~~~~~q~~~~~~~~~s~~~tl~~~~~~~~~~i~~~l~-----------GH~g~V~~l~~~~~~~~lvsgS~D~t~rv 275 (537)
T KOG0274|consen 207 DDHVVLCLQLHDGFFKSGSDDSTLHLWDLNNGYLILTRLV-----------GHFGGVWGLAFPSGGDKLVSGSTDKTERV 275 (537)
T ss_pred CcchhhhheeecCeEEecCCCceeEEeecccceEEEeecc-----------CCCCCceeEEEecCCCEEEEEecCCcEEe
Confidence 4555556556688999999999999999999998888 77 99999999999988899999999999999
Q ss_pred EEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC
Q psy14906 189 HNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP 268 (583)
Q Consensus 189 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 268 (583)
||..+|++...+.+|.+.|.++...+. ++++|+.|.+|++|+++++..+..+ .+|.++|.++... +.++++|+.
T Consensus 276 Wd~~sg~C~~~l~gh~stv~~~~~~~~---~~~sgs~D~tVkVW~v~n~~~l~l~-~~h~~~V~~v~~~--~~~lvsgs~ 349 (537)
T KOG0274|consen 276 WDCSTGECTHSLQGHTSSVRCLTIDPF---LLVSGSRDNTVKVWDVTNGACLNLL-RGHTGPVNCVQLD--EPLLVSGSY 349 (537)
T ss_pred EecCCCcEEEEecCCCceEEEEEccCc---eEeeccCCceEEEEeccCcceEEEe-ccccccEEEEEec--CCEEEEEec
Confidence 999999999999999999999987665 7889999999999999999999999 6799999999996 889999999
Q ss_pred CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcc
Q psy14906 269 DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNR 348 (583)
Q Consensus 269 d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (583)
|++|++|++. ..++++.+.+|...|.++.+.+ . ..+++|+.|++|++||+++..
T Consensus 350 d~~v~VW~~~----~~~cl~sl~gH~~~V~sl~~~~-~-~~~~Sgs~D~~IkvWdl~~~~-------------------- 403 (537)
T KOG0274|consen 350 DGTVKVWDPR----TGKCLKSLSGHTGRVYSLIVDS-E-NRLLSGSLDTTIKVWDLRTKR-------------------- 403 (537)
T ss_pred CceEEEEEhh----hceeeeeecCCcceEEEEEecC-c-ceEEeeeeccceEeecCCchh--------------------
Confidence 9999999776 6899999999999999998753 1 899999999999999987641
Q ss_pred hhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEE
Q psy14906 349 LEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVL 428 (583)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 428 (583)
T Consensus 404 -------------------------------------------------------------------------------- 403 (537)
T KOG0274|consen 404 -------------------------------------------------------------------------------- 403 (537)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc--CCee
Q psy14906 429 IGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD--NGIS 506 (583)
Q Consensus 429 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~v~ 506 (583)
+++..+ .+|..-+..+.+ .+++|++++.|++|++||...+ ++++.+... ..+.
T Consensus 404 ----------------~c~~tl-----~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~--~~~~~~~~~~~~~v~ 458 (537)
T KOG0274|consen 404 ----------------KCIHTL-----QGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEG--ECLRTLEGRHVGGVS 458 (537)
T ss_pred ----------------hhhhhh-----cCCccccccccc--ccceeEeccccccEEEeecccC--ceeeeeccCCcccEE
Confidence 223333 567777766665 5688999999999999999999 888888774 6777
Q ss_pred eEEeccCCcEEEEEeCCceEEEEEccccceEEeecccc
Q psy14906 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544 (583)
Q Consensus 507 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~ 544 (583)
.+++. ...+++++.|+++++||+++++....+-.+.
T Consensus 459 ~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l~~~~ 494 (537)
T KOG0274|consen 459 ALALG--KEEILCSSDDGSVKLWDLRSGTLIRTLLSTD 494 (537)
T ss_pred EeecC--cceEEEEecCCeeEEEecccCchhhhhhhcc
Confidence 77776 4688899999999999999999887664343
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-31 Score=217.60 Aligned_cols=293 Identities=15% Similarity=0.175 Sum_probs=240.8
Q ss_pred eeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEE
Q psy14906 103 IVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG 180 (583)
Q Consensus 103 ~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 180 (583)
..+.|....+.|+++ +++|.+|++++.|.+++|||..+|.++.++. .+...+..+.|....+.++.+
T Consensus 6 ~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~-----------skkyG~~~~~Fth~~~~~i~s 74 (311)
T KOG1446|consen 6 PAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTIN-----------SKKYGVDLACFTHHSNTVIHS 74 (311)
T ss_pred cccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEee-----------cccccccEEEEecCCceEEEc
Confidence 445666678889988 9999999999999999999999999999998 777889999998888877777
Q ss_pred ec--CCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEec
Q psy14906 181 LS--NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLY 258 (583)
Q Consensus 181 ~~--d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 258 (583)
+. |.+|+..++.+.+.++.|.+|...|+.++.+|-+. .+++++.|++|++||++..++...+ +...-..++|.|
T Consensus 75 Stk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d-~FlS~S~D~tvrLWDlR~~~cqg~l---~~~~~pi~AfDp 150 (311)
T KOG1446|consen 75 STKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDD-TFLSSSLDKTVRLWDLRVKKCQGLL---NLSGRPIAAFDP 150 (311)
T ss_pred cCCCCCceEEEEeecCceEEEcCCCCceEEEEEecCCCC-eEEecccCCeEEeeEecCCCCceEE---ecCCCcceeECC
Confidence 66 88999999999999999999999999999999987 8999999999999999987777666 233334578999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCceeeEEec-cCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccch
Q psy14906 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE-GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIAS 337 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 337 (583)
+|-++|++.....|++||+..-+..+.....+. ......+.+.|+| ||+.++.+...+.+++.|.-+|.....+....
T Consensus 151 ~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~-dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~ 229 (311)
T KOG1446|consen 151 EGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSP-DGKSILLSTNASFIYLLDAFDGTVKSTFSGYP 229 (311)
T ss_pred CCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcC-CCCEEEEEeCCCcEEEEEccCCcEeeeEeecc
Confidence 999999998888999998765432222222222 4466789999997 89999999999999999998887655442110
Q ss_pred hhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceE
Q psy14906 338 ANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTC 417 (583)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 417 (583)
. . ..-...
T Consensus 230 ~-----------------------------------------------------------------------~-~~~~~~ 237 (311)
T KOG1446|consen 230 N-----------------------------------------------------------------------A-GNLPLS 237 (311)
T ss_pred C-----------------------------------------------------------------------C-CCccee
Confidence 0 0 012357
Q ss_pred EEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCC-cccCeeEEEEeCCCcEEEEeecCCcEEEEEccC
Q psy14906 418 VYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPG-HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQ 490 (583)
Q Consensus 418 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 490 (583)
.+|+||++++++|+.||+|.+|+++++.....+ .+ +.+++.++.|+|.-.++++++. .+.+|=...
T Consensus 238 a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~-----~~~~~~~~~~~~fnP~~~mf~sa~s--~l~fw~p~~ 304 (311)
T KOG1446|consen 238 ATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVL-----RGPNGGPVSCVRFNPRYAMFVSASS--NLVFWLPDE 304 (311)
T ss_pred EEECCCCcEEEEecCCCcEEEEEcCCCcEeeEe-----cCCCCCCccccccCCceeeeeecCc--eEEEEeccc
Confidence 789999999999999999999999999999988 44 7899999999998888887754 688886553
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-32 Score=224.64 Aligned_cols=296 Identities=17% Similarity=0.281 Sum_probs=251.3
Q ss_pred ceeeeeecccCccEEEEccC--CCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEE
Q psy14906 101 IDIVGTYKGHTSPVHLILPF--GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIG 178 (583)
Q Consensus 101 ~~~~~~~~~h~~~v~~is~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 178 (583)
..+++.|.||.+.|+.++.+ ...+.+++.|.+.+||.+++|.|+.++. +|.+.|+++.|++.+.+++
T Consensus 138 ~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~-----------GH~GSVNsikfh~s~~L~l 206 (481)
T KOG0300|consen 138 FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYT-----------GHTGSVNSIKFHNSGLLLL 206 (481)
T ss_pred EeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeec-----------ccccceeeEEeccccceEE
Confidence 45678899999999999433 3578889999999999999999999998 9999999999999999999
Q ss_pred EEecCCeEEEEEc------cC----------------------------------CceeEEEeccCCCeEEEEEecCCCC
Q psy14906 179 VGLSNKKIILHNI------LT----------------------------------DESLMEFIQTWGPVTALSFRTDGPP 218 (583)
Q Consensus 179 ~~~~d~~i~iw~~------~~----------------------------------~~~~~~~~~~~~~v~~~~~~~~~~~ 218 (583)
+++.|++..||.. .. ..++..+.+|.+.|.+..|...|+
T Consensus 207 TaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~- 285 (481)
T KOG0300|consen 207 TASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQ- 285 (481)
T ss_pred EccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcc-
Confidence 9999999999972 11 023566789999999999999998
Q ss_pred EEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCe
Q psy14906 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPN 298 (583)
Q Consensus 219 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~ 298 (583)
.+++++.|.+..+||+++++++..+ .+|....+.++-+|..+++++.+.|.+.++||+.. ....+..++||...|+
T Consensus 286 Q~vTaSWDRTAnlwDVEtge~v~~L-tGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRe---aI~sV~VFQGHtdtVT 361 (481)
T KOG0300|consen 286 QMVTASWDRTANLWDVETGEVVNIL-TGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFRE---AIQSVAVFQGHTDTVT 361 (481)
T ss_pred eeeeeeccccceeeeeccCceeccc-cCcchhccccccCCcceEEEEeccCceeEeccchh---hcceeeeeccccccee
Confidence 8999999999999999999999999 89999999999999999999999999999998763 4667788999999999
Q ss_pred eEEEeeCCCCEEEEeeCCCcEEEEEccccccc-eeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccE
Q psy14906 299 YIQFYGNSSDNILSAAGDSTLRIFNTKSETSN-KNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNI 377 (583)
Q Consensus 299 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (583)
++.|. .+..+++++.|.+|++||+++.... ..+.
T Consensus 362 S~vF~--~dd~vVSgSDDrTvKvWdLrNMRsplATIR------------------------------------------- 396 (481)
T KOG0300|consen 362 SVVFN--TDDRVVSGSDDRTVKVWDLRNMRSPLATIR------------------------------------------- 396 (481)
T ss_pred EEEEe--cCCceeecCCCceEEEeeeccccCcceeee-------------------------------------------
Confidence 99997 5778999999999999999875421 1100
Q ss_pred EEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCC
Q psy14906 378 AAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPG 457 (583)
Q Consensus 378 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 457 (583)
...++..++.+..+..++.-..+..|++||+... .+..++.....+
T Consensus 397 ---------------------------------tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~-RlaRlPrtsRqg 442 (481)
T KOG0300|consen 397 ---------------------------------TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGN-RLARLPRTSRQG 442 (481)
T ss_pred ---------------------------------cCCccceeEeecCCceEEeccCCceEEEEecCCC-ccccCCcccccc
Confidence 0156788888888899999999999999999644 444444334479
Q ss_pred cccCeeEEEEeCCC--cEEEEeecCCcEEEEEccCC
Q psy14906 458 HVGGVRGVVSDNLN--QIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 458 h~~~v~~~~~s~~~--~~l~s~~~dg~i~iwd~~~~ 491 (583)
|...|+|.+|..+. .-|++++-|..+.-|.+...
T Consensus 443 HrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p 478 (481)
T KOG0300|consen 443 HRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTP 478 (481)
T ss_pred cceeeeeeeccccCcccccccccccceeeeeEeccc
Confidence 99999999997654 35889999999999998764
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=224.16 Aligned_cols=294 Identities=21% Similarity=0.287 Sum_probs=240.0
Q ss_pred EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC------------C------eehhhhhhccccceEEEEEecC
Q psy14906 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED------------R------QVENQIKKAHRKVVTGAHFLYN 259 (583)
Q Consensus 198 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~------------~------~~~~~~~~~~~~~v~~~~~~~~ 259 (583)
..+..|+.++.+.+|+|||. ++++|+.|..|+|.|++. + -.++++ ..|.++|+++.|+|.
T Consensus 106 ~ylt~HK~~cR~aafs~DG~-lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTl-YDH~devn~l~FHPr 183 (430)
T KOG0640|consen 106 KYLTSHKSPCRAAAFSPDGS-LVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTL-YDHVDEVNDLDFHPR 183 (430)
T ss_pred EEEeecccceeeeeeCCCCc-EEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeeh-hhccCcccceeecch
Confidence 44678999999999999999 999999999999999861 1 134455 678999999999999
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhh
Q psy14906 260 EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAN 339 (583)
Q Consensus 260 ~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 339 (583)
...|++++.|++|++||+.... ..+..+.++ ...+|.+++|+| .|.+|+.|..-.++++||+++.++.-.-
T Consensus 184 e~ILiS~srD~tvKlFDfsK~s-aKrA~K~~q-d~~~vrsiSfHP-sGefllvgTdHp~~rlYdv~T~Qcfvsa------ 254 (430)
T KOG0640|consen 184 ETILISGSRDNTVKLFDFSKTS-AKRAFKVFQ-DTEPVRSISFHP-SGEFLLVGTDHPTLRLYDVNTYQCFVSA------ 254 (430)
T ss_pred hheEEeccCCCeEEEEecccHH-HHHHHHHhh-ccceeeeEeecC-CCceEEEecCCCceeEEeccceeEeeec------
Confidence 9999999999999999875432 122223333 456899999998 8999999999999999999987653221
Q ss_pred hhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEE
Q psy14906 340 RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVY 419 (583)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 419 (583)
.-...|...|+++.
T Consensus 255 ------------------------------------------------------------------nPd~qht~ai~~V~ 268 (430)
T KOG0640|consen 255 ------------------------------------------------------------------NPDDQHTGAITQVR 268 (430)
T ss_pred ------------------------------------------------------------------CcccccccceeEEE
Confidence 11122347899999
Q ss_pred EccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCccc-CeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEE
Q psy14906 420 ITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVG-GVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS 498 (583)
Q Consensus 420 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 498 (583)
+++.+++.++++.||.|++||--+++++.++. ..|.+ .|.+..|..+++++++.+.|..+++|.+.++ +++..
T Consensus 269 Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~----~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~--R~l~~ 342 (430)
T KOG0640|consen 269 YSSTGSLYVTASKDGAIKLWDGVSNRCVRTIG----NAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTG--RMLKE 342 (430)
T ss_pred ecCCccEEEEeccCCcEEeeccccHHHHHHHH----hhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCC--ceEEE
Confidence 99999999999999999999999999999986 46654 7889999999999999999999999999999 88877
Q ss_pred eeccC------CeeeEEeccCCcEEEEEeC-CceEEEEEccccceEEee-cccccceeeEEecCCCcEEEEEeCCCeEEE
Q psy14906 499 IKLDN------GISFFRTHQESSMLAVCLD-DFTVNIIDIDTCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDCTIRV 570 (583)
Q Consensus 499 ~~~~~------~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~-~~h~~~v~~l~~s~d~~~l~s~~~d~~i~v 570 (583)
....+ --+...|.....++..-.+ .+.+.-||.++...+..+ -+|.+.+..+.-||.+.-+++|+.|-.+++
T Consensus 343 YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRF 422 (430)
T KOG0640|consen 343 YTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARF 422 (430)
T ss_pred EecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccceeee
Confidence 76542 2334566666676665443 478999999988766544 379999999999999999999999999999
Q ss_pred EeCC
Q psy14906 571 WDIP 574 (583)
Q Consensus 571 w~~~ 574 (583)
|--.
T Consensus 423 Wyrr 426 (430)
T KOG0640|consen 423 WYRR 426 (430)
T ss_pred eeec
Confidence 9643
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=235.01 Aligned_cols=282 Identities=17% Similarity=0.270 Sum_probs=241.5
Q ss_pred ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q psy14906 202 QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281 (583)
Q Consensus 202 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~ 281 (583)
.| ..|.+++|+|..++-+++.+. -.+.+|+..+....+.+ ......+.++.|-.||++|++|+..|.|++||+.
T Consensus 25 e~-~~vssl~fsp~~P~d~aVt~S-~rvqly~~~~~~~~k~~-srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k--- 98 (487)
T KOG0310|consen 25 EH-NSVSSLCFSPKHPYDFAVTSS-VRVQLYSSVTRSVRKTF-SRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMK--- 98 (487)
T ss_pred cc-CcceeEecCCCCCCceEEecc-cEEEEEecchhhhhhhH-HhhccceeEEEeecCCeEEEccCCcCcEEEeccc---
Confidence 44 899999999988876776664 47999999988888878 6778999999999999999999999999999643
Q ss_pred CCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCcc
Q psy14906 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPV 361 (583)
Q Consensus 282 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (583)
+...++.+.+|+.++..+.|+|.++..+++|+.|+.+++||+.+......
T Consensus 99 -~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~----------------------------- 148 (487)
T KOG0310|consen 99 -SRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAE----------------------------- 148 (487)
T ss_pred -cHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEE-----------------------------
Confidence 45577889999999999999999999999999999999999987643111
Q ss_pred ceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCC-cEEEEEecCceEEEEE
Q psy14906 362 SQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCG-NFVLIGYSSGHVDRFN 440 (583)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d 440 (583)
...|...|.|.+++|.. ..+++|+.||.|++||
T Consensus 149 ----------------------------------------------l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~D 182 (487)
T KOG0310|consen 149 ----------------------------------------------LSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWD 182 (487)
T ss_pred ----------------------------------------------ecCCcceeEeeccccCCCeEEEecCCCceEEEEE
Confidence 12233789999999964 5889999999999999
Q ss_pred cccC-ccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEE
Q psy14906 441 IQSG-AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAV 519 (583)
Q Consensus 441 ~~~~-~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 519 (583)
++.. .....+ .|..+|..+.+-|.|..+++++. ..+++||+.++...+.....|+..|+|+++..++..|.+
T Consensus 183 tR~~~~~v~el------nhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS 255 (487)
T KOG0310|consen 183 TRSLTSRVVEL------NHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLS 255 (487)
T ss_pred eccCCceeEEe------cCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEee
Confidence 9977 555555 79999999999999999999986 579999999775444455568899999999999999999
Q ss_pred EeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 520 CLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 520 ~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
|+-|+.+++||+.+.+.+..+. -.++|.+++.+||++.++.|-.||.+.+=+.
T Consensus 256 ~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~rr~ 308 (487)
T KOG0310|consen 256 GSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRR 308 (487)
T ss_pred cccccceEEEEccceEEEEeee-cccceeeEEecCCCceEEEecccceeeeehh
Confidence 9999999999999999998887 6789999999999999999999998876543
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-31 Score=228.99 Aligned_cols=282 Identities=20% Similarity=0.355 Sum_probs=244.7
Q ss_pred CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCc
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNG 284 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~ 284 (583)
..+.++...|..+ .+++|+.|..+.++|...++.+..+ .||...|+.+.|+|+...+++++.|..|++|.... .
T Consensus 220 pgi~ald~~~s~~-~ilTGG~d~~av~~d~~s~q~l~~~-~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~----~ 293 (506)
T KOG0289|consen 220 PGITALDIIPSSS-KILTGGEDKTAVLFDKPSNQILATL-KGHTKKITSVKFHKDLDTVITASADEIIRVWSVPL----S 293 (506)
T ss_pred CCeeEEeecCCCC-cceecCCCCceEEEecchhhhhhhc-cCcceEEEEEEeccchhheeecCCcceEEeecccc----c
Confidence 4678888888744 7999999999999999999999999 89999999999999999999999999999995532 2
Q ss_pred eeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCcccee
Q psy14906 285 RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQF 364 (583)
Q Consensus 285 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (583)
........|..+|+.+..+| +|.+|++++.|++..+.|++++.........
T Consensus 294 s~~~~~~~h~~~V~~ls~h~-tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~---------------------------- 344 (506)
T KOG0289|consen 294 SEPTSSRPHEEPVTGLSLHP-TGEYLLSASNDGTWAFSDISSGSQLTVVSDE---------------------------- 344 (506)
T ss_pred cCccccccccccceeeeecc-CCcEEEEecCCceEEEEEccCCcEEEEEeec----------------------------
Confidence 34456678999999999998 8999999999999999999988765432110
Q ss_pred eeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccC
Q psy14906 365 SFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSG 444 (583)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 444 (583)
...-.+++.+|+|||..+.+|..||.|++||+.++
T Consensus 345 ---------------------------------------------~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~ 379 (506)
T KOG0289|consen 345 ---------------------------------------------TSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQ 379 (506)
T ss_pred ---------------------------------------------cccceeEEeeEcCCceEEeccCCCceEEEEEcCCc
Confidence 00145899999999999999999999999999999
Q ss_pred ccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccC--CeeeEEeccCCcEEEEEeC
Q psy14906 445 AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN--GISFFRTHQESSMLAVCLD 522 (583)
Q Consensus 445 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~ 522 (583)
.....| .+|.++|..++|+.+|-+|+++++|+.|++||++.. +....+.... ++.++.|.+.|.+|+.++.
T Consensus 380 ~~~a~F-----pght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl--~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~ 452 (506)
T KOG0289|consen 380 TNVAKF-----PGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKL--KNFKTIQLDEKKEVNSLSFDQSGTYLGIAGS 452 (506)
T ss_pred cccccC-----CCCCCceeEEEeccCceEEEEEecCCeEEEEEehhh--cccceeeccccccceeEEEcCCCCeEEeecc
Confidence 988888 799999999999999999999999999999999988 6666666554 6999999999999999988
Q ss_pred CceEEEEEcc--ccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 523 DFTVNIIDID--TCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 523 dg~i~i~d~~--~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
|=+|++++-. +..++..+..|.+..+.+.|....++++++|.|..++++.+
T Consensus 453 ~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 453 DLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred eeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence 7677776633 56777888889999999999999999999999999988865
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-32 Score=222.30 Aligned_cols=288 Identities=21% Similarity=0.383 Sum_probs=247.8
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC-----
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL----- 234 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~----- 234 (583)
+|...|+.++-......+.+++.|.+.+||.++++.++.++.+|.+.|++++|++.+. ++++++.|++-.||..
T Consensus 146 GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~-L~lTaSGD~taHIW~~av~~~ 224 (481)
T KOG0300|consen 146 GHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGL-LLLTASGDETAHIWKAAVNWE 224 (481)
T ss_pred ccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccc-eEEEccCCcchHHHHHhhcCc
Confidence 9999999999988888999999999999999999999999999999999999999998 9999999999999962
Q ss_pred -CC--------C--------------------------eehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccC
Q psy14906 235 -ED--------R--------------------------QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279 (583)
Q Consensus 235 -~~--------~--------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~ 279 (583)
.. + .++..+ .+|.+.|.+..|...|+.+++++.|.+..+||++
T Consensus 225 vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~l-tgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVE- 302 (481)
T KOG0300|consen 225 VPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRL-TGHRAVVSACDWLAGGQQMVTASWDRTANLWDVE- 302 (481)
T ss_pred CCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeee-eccccceEehhhhcCcceeeeeeccccceeeeec-
Confidence 11 0 134445 6888999999999999999999999999999776
Q ss_pred CCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCC
Q psy14906 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILP 359 (583)
Q Consensus 280 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (583)
.+..+..+.||....+.++-+| ..+++++.+.|.++++||++..
T Consensus 303 ---tge~v~~LtGHd~ELtHcstHp-tQrLVvTsSrDtTFRLWDFRea-------------------------------- 346 (481)
T KOG0300|consen 303 ---TGEVVNILTGHDSELTHCSTHP-TQRLVVTSSRDTTFRLWDFREA-------------------------------- 346 (481)
T ss_pred ---cCceeccccCcchhccccccCC-cceEEEEeccCceeEeccchhh--------------------------------
Confidence 6788999999999999999997 7888999999999999998632
Q ss_pred ccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEE
Q psy14906 360 PVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRF 439 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~ 439 (583)
|.++ .+
T Consensus 347 -------------------------------------------------------I~sV------------------~V- 352 (481)
T KOG0300|consen 347 -------------------------------------------------------IQSV------------------AV- 352 (481)
T ss_pred -------------------------------------------------------ccee------------------ee-
Confidence 2111 11
Q ss_pred EcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEE
Q psy14906 440 NIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAV 519 (583)
Q Consensus 440 d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 519 (583)
| ++|...|+++.|..+.+ +++|++|.+|++||+++.. .++.+++..++++.++.+..+..+|.
T Consensus 353 ----------F-----QGHtdtVTS~vF~~dd~-vVSgSDDrTvKvWdLrNMR-splATIRtdS~~NRvavs~g~~iIAi 415 (481)
T KOG0300|consen 353 ----------F-----QGHTDTVTSVVFNTDDR-VVSGSDDRTVKVWDLRNMR-SPLATIRTDSPANRVAVSKGHPIIAI 415 (481)
T ss_pred ----------e-----cccccceeEEEEecCCc-eeecCCCceEEEeeecccc-CcceeeecCCccceeEeecCCceEEe
Confidence 2 79999999999987654 8999999999999999874 67899999999999999999999999
Q ss_pred EeCCceEEEEEccccceEE----eecccccceeeEEecCCC--cEEEEEeCCCeEEEEeCCCcc
Q psy14906 520 CLDDFTVNIIDIDTCTIIR----KLSGHMGQLTDADFSPDS--RWLITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 520 ~~~dg~i~i~d~~~~~~~~----~~~~h~~~v~~l~~s~d~--~~l~s~~~d~~i~vw~~~~~~ 577 (583)
--++..|++||+...++.+ .-++|...|+|++|..+- .-|++++.|..+.-|++....
T Consensus 416 PhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p~ 479 (481)
T KOG0300|consen 416 PHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTPT 479 (481)
T ss_pred ccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccccccccceeeeeEecccC
Confidence 9999999999998544321 335899999999998654 348899999999999987643
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-31 Score=228.41 Aligned_cols=286 Identities=19% Similarity=0.239 Sum_probs=244.9
Q ss_pred eeeecCcccEEEEEeCCC-ceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeC---eEEEEEcCCeEEEEec-c
Q psy14906 26 GYVSNHLPVVARFIRRRK-ETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDF---FHIYTSANNIIYAWRR-G 100 (583)
Q Consensus 26 g~~~~~~~~~~~~~p~~~-~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~---~~~~~~~~~~i~vw~~-~ 100 (583)
|+.+...|.+.++-+... ...++.+.|+.+.++|....+.+..++||...|+.+.+++ ..++++.|..|+||.. .
T Consensus 213 gLH~t~~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~ 292 (506)
T KOG0289|consen 213 GLHSTSTPGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPL 292 (506)
T ss_pred ceeccCCCCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccc
Confidence 445566777777655544 5556666899999999999999999999999999999966 4677889999999996 3
Q ss_pred ceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEE
Q psy14906 101 IDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIG 178 (583)
Q Consensus 101 ~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 178 (583)
.........|+++|+.+ .|.|+||++++.||+....|+++|.++....-. ...-.+++.+|+|||.+++
T Consensus 293 ~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~---------~s~v~~ts~~fHpDgLifg 363 (506)
T KOG0289|consen 293 SSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDE---------TSDVEYTSAAFHPDGLIFG 363 (506)
T ss_pred ccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeec---------cccceeEEeeEcCCceEEe
Confidence 45667788999999997 899999999999999999999999988877521 2345699999999999999
Q ss_pred EEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEec
Q psy14906 179 VGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLY 258 (583)
Q Consensus 179 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 258 (583)
+|..|+.++|||+.++..+..|.+|+++|..++|+.+|- +|++++.|+.|++||++..+..+++......++.++.|.+
T Consensus 364 tgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY-~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~ 442 (506)
T KOG0289|consen 364 TGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGY-WLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQ 442 (506)
T ss_pred ccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCce-EEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcC
Confidence 999999999999999999999999999999999999996 9999999999999999988877777444455799999999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEc
Q psy14906 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 324 (583)
.|.+|+.++.|=.|.++ ......+..+..+..|.+..+.+.|.. ..+++++++.|..++++.+
T Consensus 443 SGt~L~~~g~~l~Vy~~--~k~~k~W~~~~~~~~~sg~st~v~Fg~-~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 443 SGTYLGIAGSDLQVYIC--KKKTKSWTEIKELADHSGLSTGVRFGE-HAQYLASTSMDAILRLYAL 505 (506)
T ss_pred CCCeEEeecceeEEEEE--ecccccceeeehhhhcccccceeeecc-cceEEeeccchhheEEeec
Confidence 99999999776555555 666667888899999998999999984 7889999999999888754
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-33 Score=232.80 Aligned_cols=285 Identities=12% Similarity=0.180 Sum_probs=237.4
Q ss_pred cCCcceEEEeeCCCC-CEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 160 RWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
+|...|.|++=+|.. ..+++|+.||.|+|||+...+++.++..|.+.|..|++.. + .+++++.|.+|+.|.++. .
T Consensus 64 gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~-~--~~~tvgdDKtvK~wk~~~-~ 139 (433)
T KOG0268|consen 64 GHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ-T--SFFTVGDDKTVKQWKIDG-P 139 (433)
T ss_pred ccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc-c--ceEEecCCcceeeeeccC-C
Confidence 999999999999987 7899999999999999999999999999999999999988 3 588999999999999875 4
Q ss_pred ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCc
Q psy14906 239 VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDST 318 (583)
Q Consensus 239 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 318 (583)
++.++ .-...+..+.-+..+..++|+|. .|.|||.. ...++..+.-....|.++.|+|.....|++++.|+.
T Consensus 140 p~~ti--lg~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~----R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrs 211 (433)
T KOG0268|consen 140 PLHTI--LGKSVYLGIDHHRKNSVFATCGE--QIDIWDEQ----RDNPVSSMSWGADSISSVKFNPVETSILASCASDRS 211 (433)
T ss_pred cceee--eccccccccccccccccccccCc--eeeecccc----cCCccceeecCCCceeEEecCCCcchheeeeccCCc
Confidence 66665 23456777777777888999986 48999665 345566677777889999999977788999999999
Q ss_pred EEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccc
Q psy14906 319 LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMD 398 (583)
Q Consensus 319 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 398 (583)
|.+||++++.+++.+...
T Consensus 212 IvLyD~R~~~Pl~KVi~~-------------------------------------------------------------- 229 (433)
T KOG0268|consen 212 IVLYDLRQASPLKKVILT-------------------------------------------------------------- 229 (433)
T ss_pred eEEEecccCCccceeeee--------------------------------------------------------------
Confidence 999999998877654221
Q ss_pred ceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcc-ccccCCCCCCCcccCeeEEEEeCCCcEEEEe
Q psy14906 399 DMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH-RGSYGHDNQPGHVGGVRGVVSDNLNQIVISG 477 (583)
Q Consensus 399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 477 (583)
.....++|+|.+-.+++|++|..++.||++.-.. +... .+|.+.|.++.|+|.|+-+++|
T Consensus 230 --------------mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~-----~dhvsAV~dVdfsptG~Efvsg 290 (433)
T KOG0268|consen 230 --------------MRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVH-----KDHVSAVMDVDFSPTGQEFVSG 290 (433)
T ss_pred --------------ccccceecCccccceeeccccccceehhhhhhcccchhh-----cccceeEEEeccCCCcchhccc
Confidence 3567899999888899999999999999986443 3333 7899999999999999999999
Q ss_pred ecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceE
Q psy14906 478 GNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTII 537 (583)
Q Consensus 478 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 537 (583)
+.|.+|+||....+..+-+...+-...|.++.||.|.+++++|++|+.|++|.....+.+
T Consensus 291 syDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asekl 350 (433)
T KOG0268|consen 291 SYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEKL 350 (433)
T ss_pred cccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchhhhc
Confidence 999999999998773233333333457999999999999999999999999987654433
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-31 Score=221.10 Aligned_cols=293 Identities=14% Similarity=0.257 Sum_probs=242.6
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccC------------C------ceeEEEeccCCCeEEEEEecCCCCEEE
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILT------------D------ESLMEFIQTWGPVTALSFRTDGPPMMV 221 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~------------~------~~~~~~~~~~~~v~~~~~~~~~~~~l~ 221 (583)
.|..++++.+|+|||.++|+|+.|..|+|.|++. + -.++++-.|..+|+++.|+|... +|+
T Consensus 110 ~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~-ILi 188 (430)
T KOG0640|consen 110 SHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET-ILI 188 (430)
T ss_pred ecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh-eEE
Confidence 8999999999999999999999999999999862 1 24566778999999999999998 999
Q ss_pred EEcCCCcEEEEeCCCCeehhhhh-hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeE---EeccCCCCC
Q psy14906 222 SGSNTGHLTVWNLEDRQVENQIK-KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLR---IREGHSAPP 297 (583)
Q Consensus 222 s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~---~~~~~~~~v 297 (583)
+|+.|++|++||.......+.++ .....+|.++.|+|.|.+|+.|..-.++++||++. .++.. .-.+|.+.|
T Consensus 189 S~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T----~QcfvsanPd~qht~ai 264 (430)
T KOG0640|consen 189 SGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNT----YQCFVSANPDDQHTGAI 264 (430)
T ss_pred eccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccc----eeEeeecCcccccccce
Confidence 99999999999998654333331 13456899999999999999999999999998763 33332 235689999
Q ss_pred eeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccE
Q psy14906 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNI 377 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (583)
+++.+++ ++++.++++.||.|++||--.++++..++....
T Consensus 265 ~~V~Ys~-t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~--------------------------------------- 304 (430)
T KOG0640|consen 265 TQVRYSS-TGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHG--------------------------------------- 304 (430)
T ss_pred eEEEecC-CccEEEEeccCCcEEeeccccHHHHHHHHhhcC---------------------------------------
Confidence 9999997 899999999999999999988888776633211
Q ss_pred EEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCC
Q psy14906 378 AAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPG 457 (583)
Q Consensus 378 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 457 (583)
...|.+..|..+|+++++.+.|..+++|.+.+++.+..+......+
T Consensus 305 ----------------------------------gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tg 350 (430)
T KOG0640|consen 305 ----------------------------------GSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTG 350 (430)
T ss_pred ----------------------------------CceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCccc
Confidence 1578999999999999999999999999999999998885432233
Q ss_pred cccCeeEEEEeCCCcEEEEee-cCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEc
Q psy14906 458 HVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531 (583)
Q Consensus 458 h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 531 (583)
....-+...|+....+++.-. ..+.+.-||.++.....+..+.|.+.+..+.-||.+.-+++++.|..+++|--
T Consensus 351 rq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyr 425 (430)
T KOG0640|consen 351 RQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYR 425 (430)
T ss_pred chhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccceeeeeee
Confidence 344445667877777777665 35679999999986666777888999999999999999999999999999964
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=231.79 Aligned_cols=287 Identities=14% Similarity=0.223 Sum_probs=240.6
Q ss_pred EeecCCCCCCeEEEEeeC----eEEEEEcCCeEEEEecc-ceeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy14906 66 LSVSPQHEDDITCLSSDF----FHIYTSANNIIYAWRRG-IDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKA 140 (583)
Q Consensus 66 ~~~~~~h~~~v~~~~~~~----~~~~~~~~~~i~vw~~~-~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~ 140 (583)
+..+.||.+.|.|++-++ .+++|+.||.|++||+. .++..+++.|.+.|..|.-+...++++++|.+|+.|.++.
T Consensus 59 v~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~ 138 (433)
T KOG0268|consen 59 VGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKIDG 138 (433)
T ss_pred hhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecccceEEecCCcceeeeeccC
Confidence 456789999999999866 47888999999999985 5788999999999999966668899999999999999886
Q ss_pred CcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEE
Q psy14906 141 EETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMM 220 (583)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 220 (583)
..+.++ .....+..+.-+..+..+|+++. .|.|||.....++..+.-....|.++.|+|....+|
T Consensus 139 -~p~~ti------------lg~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsIL 203 (433)
T KOG0268|consen 139 -PPLHTI------------LGKSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSIL 203 (433)
T ss_pred -Ccceee------------eccccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchhe
Confidence 355555 33566667777777888888877 599999999999999997778999999999988899
Q ss_pred EEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeE
Q psy14906 221 VSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI 300 (583)
Q Consensus 221 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~ 300 (583)
+++..|+.|.+||++.+.+++.+ .-.-.-+.++|+|++-.|+++++|..+..+|+.. -..++....+|...|.++
T Consensus 204 as~~sDrsIvLyD~R~~~Pl~KV--i~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~---l~~p~~v~~dhvsAV~dV 278 (433)
T KOG0268|consen 204 ASCASDRSIVLYDLRQASPLKKV--ILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRN---LSRPLNVHKDHVSAVMDV 278 (433)
T ss_pred eeeccCCceEEEecccCCcccee--eeeccccceecCccccceeeccccccceehhhhh---hcccchhhcccceeEEEe
Confidence 99999999999999999988877 3455667899999888899999999999996653 456677888999999999
Q ss_pred EEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEE
Q psy14906 301 QFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAI 380 (583)
Q Consensus 301 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (583)
.|+| .|+-+++|+.|.+|+||....+.....+..
T Consensus 279 dfsp-tG~EfvsgsyDksIRIf~~~~~~SRdiYht--------------------------------------------- 312 (433)
T KOG0268|consen 279 DFSP-TGQEFVSGSYDKSIRIFPVNHGHSRDIYHT--------------------------------------------- 312 (433)
T ss_pred ccCC-CcchhccccccceEEEeecCCCcchhhhhH---------------------------------------------
Confidence 9998 899999999999999999887654322211
Q ss_pred ecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccc
Q psy14906 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHR 447 (583)
Q Consensus 381 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 447 (583)
.....|.|+.||.|.+++++|+.|+.|++|.....+.+
T Consensus 313 -----------------------------kRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asekl 350 (433)
T KOG0268|consen 313 -----------------------------KRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEKL 350 (433)
T ss_pred -----------------------------hhhheeeEEEEeccccEEEecCCCcceeeeecchhhhc
Confidence 11146899999999999999999999999987654443
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-31 Score=228.81 Aligned_cols=310 Identities=16% Similarity=0.227 Sum_probs=242.9
Q ss_pred eeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEE-Eeec------cCCceEEecccCCcceEEEeeCCCC
Q psy14906 104 VGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYL-ELSF------DNDTFKIMGKRWNSCVNVLEPSPVV 174 (583)
Q Consensus 104 ~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~------~~~~~~~~~~~~~~~i~~~~~s~~~ 174 (583)
...+..|.-++.++ +|+++++++++.+|+|.=|++.+|.... .++- ...+.......|...+.+++.|+||
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg 214 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG 214 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC
Confidence 56677899999987 9999999999999999999999987552 2211 0000000002788999999999999
Q ss_pred CEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEE
Q psy14906 175 DIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGA 254 (583)
Q Consensus 175 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~ 254 (583)
++||+|+.|..|.||+.++.+.++.+.+|.+.|.+++|..... -|++++.|+.+++|+++....+.++ .+|++.|.++
T Consensus 215 kylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~-~lys~s~Drsvkvw~~~~~s~vetl-yGHqd~v~~I 292 (479)
T KOG0299|consen 215 KYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTS-ELYSASADRSVKVWSIDQLSYVETL-YGHQDGVLGI 292 (479)
T ss_pred cEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCcc-ceeeeecCCceEEEehhHhHHHHHH-hCCccceeee
Confidence 9999999999999999999999999999999999999987665 7999999999999999999999999 8999999999
Q ss_pred EEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeec
Q psy14906 255 HFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLG 334 (583)
Q Consensus 255 ~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 334 (583)
....-++.+-+|+.|+++++|++. ......+.+|.+.+.|++|- +...+++|+.+|.|.+|++.+.+++....
T Consensus 293 daL~reR~vtVGgrDrT~rlwKi~-----eesqlifrg~~~sidcv~~I--n~~HfvsGSdnG~IaLWs~~KKkplf~~~ 365 (479)
T KOG0299|consen 293 DALSRERCVTVGGRDRTVRLWKIP-----EESQLIFRGGEGSIDCVAFI--NDEHFVSGSDNGSIALWSLLKKKPLFTSR 365 (479)
T ss_pred chhcccceEEeccccceeEEEecc-----ccceeeeeCCCCCeeeEEEe--cccceeeccCCceEEEeeecccCceeEee
Confidence 998888888888899999999773 22334567888899999998 67899999999999999998877655432
Q ss_pred cchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCC
Q psy14906 335 IASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSK 414 (583)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (583)
...... ... -...+...
T Consensus 366 ~AHgv~---------------------------------------------------------~~~------~~~~~~~W 382 (479)
T KOG0299|consen 366 LAHGVI---------------------------------------------------------PEL------DPVNGNFW 382 (479)
T ss_pred cccccc---------------------------------------------------------CCc------cccccccc
Confidence 221100 000 00000147
Q ss_pred ceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEE-eecCCcEEEEE
Q psy14906 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS-GGNDQTVKVWH 487 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s-~~~dg~i~iwd 487 (583)
|++++..|...++++|+.+|.|++|-+..+.....+... -.-.+.|++++|+++|+.+++ .+....+--|-
T Consensus 383 itsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~--ls~~GfVNsl~f~~sgk~ivagiGkEhRlGRW~ 454 (479)
T KOG0299|consen 383 ITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYS--LSLVGFVNSLAFSNSGKRIVAGIGKEHRLGRWW 454 (479)
T ss_pred eeeeEecccCceEEecCCCCceEEEEecCCccccceeee--cccccEEEEEEEccCCCEEEEecccccccceee
Confidence 999999999999999999999999999988332221111 246788999999999995554 45555554453
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=235.89 Aligned_cols=289 Identities=15% Similarity=0.208 Sum_probs=241.6
Q ss_pred eeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCc--EEEEeeccCCceEEecccCCcceEEEeeCCCCCEE
Q psy14906 102 DIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEE--TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDII 177 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 177 (583)
.....+..|.+.+..+ -++...|++|+.|..|++|+...++ .+.++. +..+.|+.+.|.++++.+
T Consensus 166 ~~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLa-----------Gs~g~it~~d~d~~~~~~ 234 (459)
T KOG0288|consen 166 RALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLA-----------GSLGNITSIDFDSDNKHV 234 (459)
T ss_pred hhhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhh-----------ccCCCcceeeecCCCceE
Confidence 3455677899999987 6777899999999999999988766 555565 778899999999999999
Q ss_pred EEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEe
Q psy14906 178 GVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL 257 (583)
Q Consensus 178 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 257 (583)
++++.|+.+++|++...+...++.+|++.|+++.|..... .+++|+.|.+|++||+....+.+++. ....+..+..+
T Consensus 235 iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~-~vVsgs~DRtiK~WDl~k~~C~kt~l--~~S~cnDI~~~ 311 (459)
T KOG0288|consen 235 IAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHS-RVVSGSADRTIKLWDLQKAYCSKTVL--PGSQCNDIVCS 311 (459)
T ss_pred EeecCCCceeeeeccchhhhhhhcccccceeeehhhcccc-ceeeccccchhhhhhhhhhheecccc--ccccccceEec
Confidence 9999999999999999999999999999999999998776 59999999999999999988888873 34455666665
Q ss_pred cCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccch
Q psy14906 258 YNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIAS 337 (583)
Q Consensus 258 ~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 337 (583)
...+++|..|+.|++||+. ..........+. .|+++..++ ++..+++++.|.++.+.|+++......+....
T Consensus 312 --~~~~~SgH~DkkvRfwD~R----s~~~~~sv~~gg-~vtSl~ls~-~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g 383 (459)
T KOG0288|consen 312 --ISDVISGHFDKKVRFWDIR----SADKTRSVPLGG-RVTSLDLSM-DGLELLSSSRDDTLKVIDLRTKEIRQTFSAEG 383 (459)
T ss_pred --ceeeeecccccceEEEecc----CCceeeEeecCc-ceeeEeecc-CCeEEeeecCCCceeeeecccccEEEEeeccc
Confidence 5578999999999999765 345555555554 899999997 89999999999999999999876655442211
Q ss_pred hhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceE
Q psy14906 338 ANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTC 417 (583)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 417 (583)
+... ...+.
T Consensus 384 ---------------------------------------------------------------------~k~a--sDwtr 392 (459)
T KOG0288|consen 384 ---------------------------------------------------------------------FKCA--SDWTR 392 (459)
T ss_pred ---------------------------------------------------------------------cccc--cccce
Confidence 1111 45888
Q ss_pred EEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEE
Q psy14906 418 VYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486 (583)
Q Consensus 418 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iw 486 (583)
+.|||++.|+++|+.||.|+||++.++++...+... .....|++++|+|.|..|++++.++.+.+|
T Consensus 393 vvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s---~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 393 VVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLS---TSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred eEECCCCceeeeccCCCcEEEEEccCceEEEEeccC---CCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 999999999999999999999999999998887532 222279999999999999999999999999
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=246.04 Aligned_cols=342 Identities=16% Similarity=0.206 Sum_probs=265.9
Q ss_pred eCe-EEEEEcCCeEEEEecc-------ceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCC--cEEEEeec
Q psy14906 82 DFF-HIYTSANNIIYAWRRG-------IDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAE--ETYLELSF 149 (583)
Q Consensus 82 ~~~-~~~~~~~~~i~vw~~~-------~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~ 149 (583)
.++ ++++|.||.|++|+.. ......++.|.++|+.+ .-+|+.|+|++.|-+|++|+...+ -+..++.
T Consensus 36 ~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir- 114 (735)
T KOG0308|consen 36 NGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIR- 114 (735)
T ss_pred CCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhh-
Confidence 345 8889999999999963 22577899999999997 778889999999999999999887 5667776
Q ss_pred cCCceEEecccCCcceEEEee-CCCCCEEEEEecCCeEEEEEccCC--ceeEE--------Ee-ccCCCeEEEEEecCCC
Q psy14906 150 DNDTFKIMGKRWNSCVNVLEP-SPVVDIIGVGLSNKKIILHNILTD--ESLME--------FI-QTWGPVTALSFRTDGP 217 (583)
Q Consensus 150 ~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~~~~d~~i~iw~~~~~--~~~~~--------~~-~~~~~v~~~~~~~~~~ 217 (583)
.|...|.|+++ -++..++|+|+-|+.|.+||+.++ +.+.+ +. ++...|++++.++.|.
T Consensus 115 ----------~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t 184 (735)
T KOG0308|consen 115 ----------THKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGT 184 (735)
T ss_pred ----------cccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcce
Confidence 99999999999 888999999999999999999987 23332 22 7888999999999997
Q ss_pred CEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCC
Q psy14906 218 PMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP 297 (583)
Q Consensus 218 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v 297 (583)
++++|+.++.+++||.++++.+..+ .||+..|.++..++||+.+++++.||+|++||+. ..+++.++..|...|
T Consensus 185 -~ivsGgtek~lr~wDprt~~kimkL-rGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLg----qQrCl~T~~vH~e~V 258 (735)
T KOG0308|consen 185 -IIVSGGTEKDLRLWDPRTCKKIMKL-RGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLG----QQRCLATYIVHKEGV 258 (735)
T ss_pred -EEEecCcccceEEeccccccceeee-eccccceEEEEEcCCCCeEeecCCCceEEeeecc----ccceeeeEEeccCce
Confidence 9999999999999999999999999 7999999999999999999999999999999775 678999999999999
Q ss_pred eeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccE
Q psy14906 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNI 377 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (583)
.++..+| +-..+++|+.||.|..-|+++......+
T Consensus 259 WaL~~~~-sf~~vYsG~rd~~i~~Tdl~n~~~~tli-------------------------------------------- 293 (735)
T KOG0308|consen 259 WALQSSP-SFTHVYSGGRDGNIYRTDLRNPAKSTLI-------------------------------------------- 293 (735)
T ss_pred EEEeeCC-CcceEEecCCCCcEEecccCCchhheEe--------------------------------------------
Confidence 9999986 7899999999999999998874221111
Q ss_pred EEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCC
Q psy14906 378 AAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPG 457 (583)
Q Consensus 378 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 457 (583)
+.. ..++..+..+...+-+-+++.|+.|.-|..+-.
T Consensus 294 ------------ck~-------------------daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~------------- 329 (735)
T KOG0308|consen 294 ------------CKE-------------------DAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPD------------- 329 (735)
T ss_pred ------------ecC-------------------CCchhhhhhccccCCceeeeccccceecCCccc-------------
Confidence 000 034555555544444466677888887764311
Q ss_pred cccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceE
Q psy14906 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTII 537 (583)
Q Consensus 458 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 537 (583)
+.+++.+++.. -+.|......+... .+...+.+..++...++-.|.+++.+-...|.+.+||+-.+..+
T Consensus 330 -------~~l~~s~~~~~-~~T~~~~~~~~~~~---tp~~vi~Gg~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl~~~~~ 398 (735)
T KOG0308|consen 330 -------IALSVSGDLDF-FSTDSNNHSCDLTN---TPDSVIPGGAAIKKHAMLNDKRHVLTKDAKGNVALWDILACVKV 398 (735)
T ss_pred -------cccccCCCCCc-ccccCCCccccccC---CCceeccCchhhhhhhhhcCcceEeeecCCCCEEEEEeeeeeeh
Confidence 13334444333 22233333333322 34445555566777777788889999889999999998766555
Q ss_pred Eee
Q psy14906 538 RKL 540 (583)
Q Consensus 538 ~~~ 540 (583)
..+
T Consensus 399 ~d~ 401 (735)
T KOG0308|consen 399 EDF 401 (735)
T ss_pred hhc
Confidence 443
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-30 Score=215.65 Aligned_cols=221 Identities=17% Similarity=0.250 Sum_probs=178.1
Q ss_pred eEEEEEcCCeEEEEeccce-------------eeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeecc
Q psy14906 84 FHIYTSANNIIYAWRRGID-------------IVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFD 150 (583)
Q Consensus 84 ~~~~~~~~~~i~vw~~~~~-------------~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 150 (583)
++++|++...|.=+++..+ ++..+..|.++|+++.-++.|+|+|+.|-+|+|||+.....+..+-
T Consensus 3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll-- 80 (362)
T KOG0294|consen 3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILL-- 80 (362)
T ss_pred eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEecceeEeccCCCCcEEEEeccchhhhccee--
Confidence 3567777777766664211 2445679999999999999999999999999999999999888887
Q ss_pred CCceEEecccCCcceEEEeeCCCCC--EEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCc
Q psy14906 151 NDTFKIMGKRWNSCVNVLEPSPVVD--IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGH 228 (583)
Q Consensus 151 ~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 228 (583)
.|.+.|+++.|.++.. .|++|+.||.|.+|+....+++..+++|.+.|+.++.+|.++ +.++.+.|+.
T Consensus 81 ---------~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~K-LALsVg~D~~ 150 (362)
T KOG0294|consen 81 ---------SHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGK-LALSVGGDQV 150 (362)
T ss_pred ---------ccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCc-eEEEEcCCce
Confidence 8999999999999775 899999999999999999999999999999999999999999 8999999999
Q ss_pred EEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCC
Q psy14906 229 LTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSD 308 (583)
Q Consensus 229 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 308 (583)
++.||+-.|+.-....-.+.. +.+.|+|.|.+++.++.+ .|-+|.++. ........ ....+.++.|. ++.
T Consensus 151 lr~WNLV~Gr~a~v~~L~~~a--t~v~w~~~Gd~F~v~~~~-~i~i~q~d~----A~v~~~i~-~~~r~l~~~~l--~~~ 220 (362)
T KOG0294|consen 151 LRTWNLVRGRVAFVLNLKNKA--TLVSWSPQGDHFVVSGRN-KIDIYQLDN----ASVFREIE-NPKRILCATFL--DGS 220 (362)
T ss_pred eeeehhhcCccceeeccCCcc--eeeEEcCCCCEEEEEecc-EEEEEeccc----HhHhhhhh-ccccceeeeec--CCc
Confidence 999999988765555323333 349999999999988866 489996653 22222222 12446666665 677
Q ss_pred EEEEeeCCCcEEEEEccc
Q psy14906 309 NILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 309 ~l~~~~~dg~i~iwd~~~ 326 (583)
.|++|..|+.|.+||...
T Consensus 221 ~L~vG~d~~~i~~~D~ds 238 (362)
T KOG0294|consen 221 ELLVGGDNEWISLKDTDS 238 (362)
T ss_pred eEEEecCCceEEEeccCC
Confidence 888888888888777654
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-31 Score=234.30 Aligned_cols=300 Identities=18% Similarity=0.207 Sum_probs=231.2
Q ss_pred eeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEE
Q psy14906 103 IVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG 180 (583)
Q Consensus 103 ~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 180 (583)
....+.+|+..|.++ .|.|..|++|+.|.+|++||++........ +....+.....|.+++|++.|..|++.
T Consensus 159 hEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~------fr~l~P~E~h~i~sl~ys~Tg~~iLvv 232 (641)
T KOG0772|consen 159 HEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRS------FRQLQPCETHQINSLQYSVTGDQILVV 232 (641)
T ss_pred ceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchh------hhccCcccccccceeeecCCCCeEEEE
Confidence 344577889999987 899999999999999999999864322111 111112556789999999999999999
Q ss_pred ecCCeEEEEEccCCceeEEE-------------eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhh-h---
Q psy14906 181 LSNKKIILHNILTDESLMEF-------------IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ-I--- 243 (583)
Q Consensus 181 ~~d~~i~iw~~~~~~~~~~~-------------~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~-~--- 243 (583)
+.....+|+|-. |..+.++ ++|...++|.+|+|+.+..+++++.||++++||+++.+...+ +
T Consensus 233 sg~aqakl~DRd-G~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k 311 (641)
T KOG0772|consen 233 SGSAQAKLLDRD-GFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTK 311 (641)
T ss_pred ecCcceeEEccC-CceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeec
Confidence 888999999975 4333332 488899999999999888999999999999999987543222 2
Q ss_pred -hhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCC--CCeeEEEeeCCCCEEEEeeCCCcEE
Q psy14906 244 -KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA--PPNYIQFYGNSSDNILSAAGDSTLR 320 (583)
Q Consensus 244 -~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~i~ 320 (583)
..+..-+++.++|++||++||+|..||+|.+|+..... .......-..|.. .|+++.|++ +|++|++-+.|++++
T Consensus 312 ~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~-v~p~~~vk~AH~~g~~Itsi~FS~-dg~~LlSRg~D~tLK 389 (641)
T KOG0772|consen 312 PAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRT-VRPVMKVKDAHLPGQDITSISFSY-DGNYLLSRGFDDTLK 389 (641)
T ss_pred cCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcc-cccceEeeeccCCCCceeEEEecc-ccchhhhccCCCcee
Confidence 12334578999999999999999999999999652221 2223344556776 899999997 899999999999999
Q ss_pred EEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccce
Q psy14906 321 IFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDM 400 (583)
Q Consensus 321 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 400 (583)
+||++..+..-....
T Consensus 390 vWDLrq~kkpL~~~t----------------------------------------------------------------- 404 (641)
T KOG0772|consen 390 VWDLRQFKKPLNVRT----------------------------------------------------------------- 404 (641)
T ss_pred eeeccccccchhhhc-----------------------------------------------------------------
Confidence 999987543111000
Q ss_pred eeecccccccCCCCceEEEEccCCcEEEEEec------CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEE
Q psy14906 401 FLVPERCKQAKQSKPTCVYITHCGNFVLIGYS------SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIV 474 (583)
Q Consensus 401 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 474 (583)
.+.. ...-+.++|||+.++|++|+. .|.+++||..+-..+..+ .-....|..+.|+|.-+.|
T Consensus 405 -----gL~t--~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki-----~i~~aSvv~~~WhpkLNQi 472 (641)
T KOG0772|consen 405 -----GLPT--PFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKI-----DISTASVVRCLWHPKLNQI 472 (641)
T ss_pred -----CCCc--cCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEe-----cCCCceEEEEeecchhhhe
Confidence 0000 045678999999999999875 578999999999888888 4557789999999998889
Q ss_pred EEeecCCcEEEEEc
Q psy14906 475 ISGGNDQTVKVWHF 488 (583)
Q Consensus 475 ~s~~~dg~i~iwd~ 488 (583)
..++.||++++|--
T Consensus 473 ~~gsgdG~~~vyYd 486 (641)
T KOG0772|consen 473 FAGSGDGTAHVYYD 486 (641)
T ss_pred eeecCCCceEEEEC
Confidence 99999999998743
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-31 Score=248.87 Aligned_cols=291 Identities=16% Similarity=0.205 Sum_probs=218.7
Q ss_pred eEEEe-ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhcc----------ccceEEEEEec---CCC-
Q psy14906 197 LMEFI-QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAH----------RKVVTGAHFLY---NEP- 261 (583)
Q Consensus 197 ~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~----------~~~v~~~~~~~---~~~- 261 (583)
.+.+. .|.+.|+++.|++||+ +||+|+.|+.|+||.+...+.. ....+. .+.+..+.-++ .++
T Consensus 259 ~Qe~~~ah~gaIw~mKFS~DGK-yLAsaGeD~virVWkVie~e~~-~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~ 336 (712)
T KOG0283|consen 259 VQEISNAHKGAIWAMKFSHDGK-YLASAGEDGVIRVWKVIESERM-RVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRT 336 (712)
T ss_pred eeccccccCCcEEEEEeCCCCc-eeeecCCCceEEEEEEeccchh-cccccccchhhhhhhhccccCccccccccccccc
Confidence 34455 8999999999999999 9999999999999998753321 110000 00111111111 001
Q ss_pred -EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhh
Q psy14906 262 -LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANR 340 (583)
Q Consensus 262 -~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 340 (583)
..-.+..... .+.......-..+++..+.||.+.|..+.|+ ..++|++++.|.++++|++....+++.+.+.
T Consensus 337 s~~~~~~~s~~-~~~p~~~f~f~ekP~~ef~GHt~DILDlSWS--Kn~fLLSSSMDKTVRLWh~~~~~CL~~F~Hn---- 409 (712)
T KOG0283|consen 337 SSSRKGSQSPC-VLLPLKAFVFSEKPFCEFKGHTADILDLSWS--KNNFLLSSSMDKTVRLWHPGRKECLKVFSHN---- 409 (712)
T ss_pred cccccccCCcc-ccCCCccccccccchhhhhccchhheecccc--cCCeeEeccccccEEeecCCCcceeeEEecC----
Confidence 1111222222 1221111112456778899999999999999 5789999999999999999999888877554
Q ss_pred hhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEE
Q psy14906 341 NNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYI 420 (583)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 420 (583)
..|+|++|
T Consensus 410 ------------------------------------------------------------------------dfVTcVaF 417 (712)
T KOG0283|consen 410 ------------------------------------------------------------------------DFVTCVAF 417 (712)
T ss_pred ------------------------------------------------------------------------CeeEEEEe
Confidence 56999999
Q ss_pred cc-CCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEe
Q psy14906 421 TH-CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI 499 (583)
Q Consensus 421 s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 499 (583)
+| |.+++++|+-||.++||++...+...-. .-..-|++++|.|||++.+.|+.+|.+++|+.... ++....
T Consensus 418 nPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~------Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~l--k~~~~~ 489 (712)
T KOG0283|consen 418 NPVDDRYFISGSLDGKVRLWSISDKKVVDWN------DLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGL--KLVSDF 489 (712)
T ss_pred cccCCCcEeecccccceEEeecCcCeeEeeh------hhhhhheeEEeccCCceEEEEEeccEEEEEEccCC--eEEEee
Confidence 99 6799999999999999999887776554 34478999999999999999999999999999887 544332
Q ss_pred e--c-------cCCeeeEEeccCCc-EEEEEeCCceEEEEEccccceEEeecccccc--eeeEEecCCCcEEEEEeCCCe
Q psy14906 500 K--L-------DNGISFFRTHQESS-MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ--LTDADFSPDSRWLITASMDCT 567 (583)
Q Consensus 500 ~--~-------~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~--v~~l~~s~d~~~l~s~~~d~~ 567 (583)
. . +..|+.+.|.|... .+++.+.|..|+|||..+.+++..|+|+... =....|+.||++|+++++|..
T Consensus 490 ~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~ 569 (712)
T KOG0283|consen 490 HIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSW 569 (712)
T ss_pred eEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCce
Confidence 2 1 22699999997544 5888899999999999999999999876543 345689999999999999999
Q ss_pred EEEEeCCCc
Q psy14906 568 IRVWDIPSS 576 (583)
Q Consensus 568 i~vw~~~~~ 576 (583)
|++|+....
T Consensus 570 VYiW~~~~~ 578 (712)
T KOG0283|consen 570 VYIWKNDSF 578 (712)
T ss_pred EEEEeCCCC
Confidence 999998543
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=242.64 Aligned_cols=349 Identities=14% Similarity=0.216 Sum_probs=270.0
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCc------EEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEc
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEE------TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNI 191 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~ 191 (583)
.|.++||++||.||.|++|+..... ...+++ .|...|+.++...+++.|++++.|-+|++|+.
T Consensus 34 a~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme-----------~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~ 102 (735)
T KOG0308|consen 34 APNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASME-----------HHSDWVNDIILCGNGKTLISASSDTTVKVWNA 102 (735)
T ss_pred CCCCceEEecCCCceEEEeccccccCCcccchhhhhh-----------hhHhHHhhHHhhcCCCceEEecCCceEEEeec
Confidence 6788999999999999999987532 244444 89999999999999999999999999999999
Q ss_pred cCC--ceeEEEeccCCCeEEEEE-ecCCCCEEEEEcCCCcEEEEeCCCC--eeh--------hhhhhccccceEEEEEec
Q psy14906 192 LTD--ESLMEFIQTWGPVTALSF-RTDGPPMMVSGSNTGHLTVWNLEDR--QVE--------NQIKKAHRKVVTGAHFLY 258 (583)
Q Consensus 192 ~~~--~~~~~~~~~~~~v~~~~~-~~~~~~~l~s~~~dg~i~vwd~~~~--~~~--------~~~~~~~~~~v~~~~~~~ 258 (583)
..+ -+..++..|.+-|.|+++ -++.. ++|+|+-|+.|.+||++++ +++ ..+..++...|.+++.++
T Consensus 103 ~~~~~~c~stir~H~DYVkcla~~ak~~~-lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~ 181 (735)
T KOG0308|consen 103 HKDNTFCMSTIRTHKDYVKCLAYIAKNNE-LVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQ 181 (735)
T ss_pred ccCcchhHhhhhcccchheeeeecccCce-eEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCC
Confidence 877 577888999999999999 66666 9999999999999999977 222 223237888999999999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchh
Q psy14906 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 338 (583)
.|..|++|+..+.+++||- . ..+.+..++||+..|..+..++ ||.++++++.||+|++||+...+++..+..
T Consensus 182 t~t~ivsGgtek~lr~wDp--r--t~~kimkLrGHTdNVr~ll~~d-DGt~~ls~sSDgtIrlWdLgqQrCl~T~~v--- 253 (735)
T KOG0308|consen 182 TGTIIVSGGTEKDLRLWDP--R--TCKKIMKLRGHTDNVRVLLVND-DGTRLLSASSDGTIRLWDLGQQRCLATYIV--- 253 (735)
T ss_pred cceEEEecCcccceEEecc--c--cccceeeeeccccceEEEEEcC-CCCeEeecCCCceEEeeeccccceeeeEEe---
Confidence 9999999999999999954 3 4556667789999999999996 899999999999999999998877665411
Q ss_pred hhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEE
Q psy14906 339 NRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCV 418 (583)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 418 (583)
|...+.++
T Consensus 254 ------------------------------------------------------------------------H~e~VWaL 261 (735)
T KOG0308|consen 254 ------------------------------------------------------------------------HKEGVWAL 261 (735)
T ss_pred ------------------------------------------------------------------------ccCceEEE
Confidence 11458888
Q ss_pred EEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEE
Q psy14906 419 YITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS 498 (583)
Q Consensus 419 ~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 498 (583)
..+|+=..+++|+.||.|..-|+.+......+ .....+|..+..+...+-+-.+..|+.|+-|...-. .
T Consensus 262 ~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tli-----ck~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~-----~- 330 (735)
T KOG0308|consen 262 QSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLI-----CKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPD-----I- 330 (735)
T ss_pred eeCCCcceEEecCCCCcEEecccCCchhheEe-----ecCCCchhhhhhccccCCceeeeccccceecCCccc-----c-
Confidence 88999999999999999999999885443333 244556777777755555577788999999976543 1
Q ss_pred eeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccc
Q psy14906 499 IKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578 (583)
Q Consensus 499 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~ 578 (583)
.+++.|.+.. -+.+......+... .+-....| ..+|..-+.-.|.+.++|-...|.+.+||+-.++.
T Consensus 331 ----------~l~~s~~~~~-~~T~~~~~~~~~~~-tp~~vi~G-g~ai~k~~mL~dkRhVlTkDa~gnv~lwDIl~~~~ 397 (735)
T KOG0308|consen 331 ----------ALSVSGDLDF-FSTDSNNHSCDLTN-TPDSVIPG-GAAIKKHAMLNDKRHVLTKDAKGNVALWDILACVK 397 (735)
T ss_pred ----------ccccCCCCCc-ccccCCCccccccC-CCceeccC-chhhhhhhhhcCcceEeeecCCCCEEEEEeeeeee
Confidence 3344444444 23333334444321 12222332 23455666667999999999999999999988877
Q ss_pred cccc
Q psy14906 579 IDCF 582 (583)
Q Consensus 579 ~~~~ 582 (583)
+..|
T Consensus 398 ~~d~ 401 (735)
T KOG0308|consen 398 VEDF 401 (735)
T ss_pred hhhc
Confidence 6554
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-31 Score=253.00 Aligned_cols=292 Identities=18% Similarity=0.237 Sum_probs=239.3
Q ss_pred CCcceEEEeeCCCCCEEEEEe--cCCeEEEEEccC------------CceeEEEeccCCCeEEEEEecCCCCEEEEEcCC
Q psy14906 161 WNSCVNVLEPSPVVDIIGVGL--SNKKIILHNILT------------DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT 226 (583)
Q Consensus 161 ~~~~i~~~~~s~~~~~l~~~~--~d~~i~iw~~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 226 (583)
+...|.++..+|||..+|+|+ .|+.++||+.+. .+.+.+...|.+.|+|+.|+|||+ +||+|++|
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~-~lAsGSDD 90 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGS-YLASGSDD 90 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCC-eEeeccCc
Confidence 356799999999999999999 899999998642 245566778999999999999999 89999999
Q ss_pred CcEEEEeCCC------------------CeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeE
Q psy14906 227 GHLTVWNLED------------------RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLR 288 (583)
Q Consensus 227 g~i~vwd~~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~ 288 (583)
+.|.||+... -+....+ .+|...|..++|+|++.+|++++.|++|.+|+.. ....++
T Consensus 91 ~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l-~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~----tF~~~~ 165 (942)
T KOG0973|consen 91 RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSIL-RGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAK----TFELLK 165 (942)
T ss_pred ceEEEeeecccCCcccccccccccccceeeEEEEE-ecCCCccceeccCCCccEEEEecccceEEEEccc----cceeee
Confidence 9999999872 0244555 7899999999999999999999999999999543 458899
Q ss_pred EeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeec
Q psy14906 289 IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGL 368 (583)
Q Consensus 289 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (583)
.+.+|...|..+.|.| -|++|++-+.|++|++|++.+-...+.+.....
T Consensus 166 vl~~H~s~VKGvs~DP-~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~------------------------------ 214 (942)
T KOG0973|consen 166 VLRGHQSLVKGVSWDP-IGKYFASQSDDRTLKVWRTSDWGIEKSITKPFE------------------------------ 214 (942)
T ss_pred eeecccccccceEECC-ccCeeeeecCCceEEEEEcccceeeEeeccchh------------------------------
Confidence 9999999999999998 799999999999999999766544443311100
Q ss_pred ccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec----CceEEEEEcccC
Q psy14906 369 AREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS----SGHVDRFNIQSG 444 (583)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~ 444 (583)
. .........+.|||||++|++... -..+.|.+..+-
T Consensus 215 -------------------------------------~--~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tW 255 (942)
T KOG0973|consen 215 -------------------------------------E--SPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTW 255 (942)
T ss_pred -------------------------------------h--CCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCc
Confidence 0 000145778999999999998643 346888888777
Q ss_pred ccccccCCCCCCCcccCeeEEEEeCC-----Cc------------EEEEeecCCcEEEEEccCCCCCceEEeec--cCCe
Q psy14906 445 AHRGSYGHDNQPGHVGGVRGVVSDNL-----NQ------------IVISGGNDQTVKVWHFKQTGKPPLRSIKL--DNGI 505 (583)
Q Consensus 445 ~~~~~~~~~~~~~h~~~v~~~~~s~~-----~~------------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~v 505 (583)
+....+ -+|.++++++.|+|. .+ .+|+|+.|++|.||..... +++..... ...|
T Consensus 256 k~~~~L-----vGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~--RPl~vi~~lf~~SI 328 (942)
T KOG0973|consen 256 KVDKDL-----VGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALP--RPLFVIHNLFNKSI 328 (942)
T ss_pred eeeeee-----ecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCC--CchhhhhhhhcCce
Confidence 766667 799999999999882 11 6789999999999999776 66655443 4689
Q ss_pred eeEEeccCCcEEEEEeCCceEEEEEccccc
Q psy14906 506 SFFRTHQESSMLAVCLDDFTVNIIDIDTCT 535 (583)
Q Consensus 506 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 535 (583)
..++|+|||..|++++.||+|.++.++..+
T Consensus 329 ~DmsWspdG~~LfacS~DGtV~~i~Fee~E 358 (942)
T KOG0973|consen 329 VDMSWSPDGFSLFACSLDGTVALIHFEEKE 358 (942)
T ss_pred eeeeEcCCCCeEEEEecCCeEEEEEcchHH
Confidence 999999999999999999999999987543
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.7e-31 Score=247.07 Aligned_cols=250 Identities=12% Similarity=0.187 Sum_probs=204.1
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccC----------------------------------------------
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILT---------------------------------------------- 193 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~---------------------------------------------- 193 (583)
.|.+.|++|.||+||++||+|+.|+.|+||.+..
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~ 344 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ 344 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence 8999999999999999999999999999998765
Q ss_pred --------------CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEec-
Q psy14906 194 --------------DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLY- 258 (583)
Q Consensus 194 --------------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~- 258 (583)
.++++.|.+|.+.|..+.|+.++ +|++++.|.+|++|++...++++.+ .|.+.|+|++|+|
T Consensus 345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~--fLLSSSMDKTVRLWh~~~~~CL~~F--~HndfVTcVaFnPv 420 (712)
T KOG0283|consen 345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN--FLLSSSMDKTVRLWHPGRKECLKVF--SHNDFVTCVAFNPV 420 (712)
T ss_pred CccccCCCccccccccchhhhhccchhheecccccCC--eeEeccccccEEeecCCCcceeeEE--ecCCeeEEEEeccc
Confidence 02234567899999999999987 7999999999999999999999999 7999999999999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchh
Q psy14906 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 338 (583)
|.++|++|+-|+.+|||++. ...+.....-..-|++++|.| ||+..+.|+.+|.+++|+....+........
T Consensus 421 DDryFiSGSLD~KvRiWsI~-----d~~Vv~W~Dl~~lITAvcy~P-dGk~avIGt~~G~C~fY~t~~lk~~~~~~I~-- 492 (712)
T KOG0283|consen 421 DDRYFISGSLDGKVRLWSIS-----DKKVVDWNDLRDLITAVCYSP-DGKGAVIGTFNGYCRFYDTEGLKLVSDFHIR-- 492 (712)
T ss_pred CCCcEeecccccceEEeecC-----cCeeEeehhhhhhheeEEecc-CCceEEEEEeccEEEEEEccCCeEEEeeeEe--
Confidence 67899999999999999773 333334444457899999998 7999999999999999999876654432110
Q ss_pred hhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEE
Q psy14906 339 NRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCV 418 (583)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 418 (583)
+-. .....+ ..|+.+
T Consensus 493 --------------------------------------------------~~~--------------~Kk~~~-~rITG~ 507 (712)
T KOG0283|consen 493 --------------------------------------------------LHN--------------KKKKQG-KRITGL 507 (712)
T ss_pred --------------------------------------------------ecc--------------CccccC-ceeeee
Confidence 000 001111 369999
Q ss_pred EEccCC-cEEEEEecCceEEEEEcccCccccccCCCCCCCccc--CeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 419 YITHCG-NFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVG--GVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 419 ~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
.|.|.. ..+++.+.|..|+|||.++..++..+ .++.. .-....|+.||++|+++++|..|++|+....
T Consensus 508 Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~Kf-----KG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 508 QFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKF-----KGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKNDSF 578 (712)
T ss_pred EecCCCCCeEEEecCCCceEEEeccchhhhhhh-----cccccCCcceeeeEccCCCEEEEeecCceEEEEeCCCC
Confidence 998754 46888899999999999999998888 44322 3356788999999999999999999998543
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=239.16 Aligned_cols=272 Identities=14% Similarity=0.153 Sum_probs=204.1
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCC--ceEEecccCCcceEEEeeCC-CCCEEEEEecCCeEEEEEccC
Q psy14906 117 ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDND--TFKIMGKRWNSCVNVLEPSP-VVDIIGVGLSNKKIILHNILT 193 (583)
Q Consensus 117 is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iw~~~~ 193 (583)
.++++..+++++.+.....|+...+..+..+.-... .....-.+|.+.|.+++|+| ++++|++|+.|++|++||+.+
T Consensus 28 ~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~ 107 (493)
T PTZ00421 28 ALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPE 107 (493)
T ss_pred ccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCC
Confidence 367777777777777777887665543322210000 00000128999999999999 889999999999999999976
Q ss_pred C-------ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEE
Q psy14906 194 D-------ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266 (583)
Q Consensus 194 ~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 266 (583)
+ +.+..+.+|...|.+++|+|++..+|++++.|++|++||+++++.+..+ .+|...|.+++|+|++++|+++
T Consensus 108 ~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l-~~h~~~V~sla~spdG~lLatg 186 (493)
T PTZ00421 108 EGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVI-KCHSDQITSLEWNLDGSLLCTT 186 (493)
T ss_pred CccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEE-cCCCCceEEEEEECCCCEEEEe
Confidence 5 3567788999999999999987558999999999999999999988888 7899999999999999999999
Q ss_pred eCCCeEEEEEccCCCCCceeeEEeccCCCCC-eeEEEeeCCCCEEEEee----CCCcEEEEEccccccceeeccchhhhh
Q psy14906 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPP-NYIQFYGNSSDNILSAA----GDSTLRIFNTKSETSNKNLGIASANRN 341 (583)
Q Consensus 267 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~ 341 (583)
+.|+.|++||+. .++.+..+.+|.... ..+.|.+ ++..+++++ .|+.|++||+++.......
T Consensus 187 s~Dg~IrIwD~r----sg~~v~tl~~H~~~~~~~~~w~~-~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~-------- 253 (493)
T PTZ00421 187 SKDKKLNIIDPR----DGTIVSSVEAHASAKSQRCLWAK-RKDLIITLGCSKSQQRQIMLWDTRKMASPYST-------- 253 (493)
T ss_pred cCCCEEEEEECC----CCcEEEEEecCCCCcceEEEEcC-CCCeEEEEecCCCCCCeEEEEeCCCCCCceeE--------
Confidence 999999999765 455677788887653 4677886 566666654 4789999998754321100
Q ss_pred hhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEc
Q psy14906 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYIT 421 (583)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 421 (583)
.+.. ....+....|+
T Consensus 254 ------------------------------------------------~~~d-----------------~~~~~~~~~~d 268 (493)
T PTZ00421 254 ------------------------------------------------VDLD-----------------QSSALFIPFFD 268 (493)
T ss_pred ------------------------------------------------eccC-----------------CCCceEEEEEc
Confidence 0000 00234556789
Q ss_pred cCCcEEEEEe-cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC
Q psy14906 422 HCGNFVLIGY-SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN 471 (583)
Q Consensus 422 ~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 471 (583)
++++++++++ .|+.|++||+.+++...... ..+..++..++|.|..
T Consensus 269 ~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~----~~s~~~~~g~~~~pk~ 315 (493)
T PTZ00421 269 EDTNLLYIGSKGEGNIRCFELMNERLTFCSS----YSSVEPHKGLCMMPKW 315 (493)
T ss_pred CCCCEEEEEEeCCCeEEEEEeeCCceEEEee----ccCCCCCcceEecccc
Confidence 9999998887 59999999999988766542 2456678888888853
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=206.83 Aligned_cols=275 Identities=15% Similarity=0.198 Sum_probs=218.0
Q ss_pred ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC-CeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q psy14906 202 QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED-RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA 280 (583)
Q Consensus 202 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~ 280 (583)
...+.|.+++|||....++++++.||+||+|+++. +..+......|.++|.+++|+.||..+++|+.|+.+++||+.
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~-- 102 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLA-- 102 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEcc--
Confidence 45578999999996665888999999999999987 455555547899999999999999999999999999999775
Q ss_pred CCCceeeEEeccCCCCCeeEEEeeCC-CCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCC
Q psy14906 281 DGNGRLLRIREGHSAPPNYIQFYGNS-SDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILP 359 (583)
Q Consensus 281 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (583)
.+ .......|.++|..+.|.+.- -..|++|+.|.+|++||++....+..+..+
T Consensus 103 --S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LP----------------------- 156 (347)
T KOG0647|consen 103 --SG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLP----------------------- 156 (347)
T ss_pred --CC-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeecc-----------------------
Confidence 22 456677899999999998621 247899999999999999977665444211
Q ss_pred ccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEE
Q psy14906 360 PVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRF 439 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~ 439 (583)
-.+.+.+-....++++..+..|.+|
T Consensus 157 -------------------------------------------------------eRvYa~Dv~~pm~vVata~r~i~vy 181 (347)
T KOG0647|consen 157 -------------------------------------------------------ERVYAADVLYPMAVVATAERHIAVY 181 (347)
T ss_pred -------------------------------------------------------ceeeehhccCceeEEEecCCcEEEE
Confidence 1122223334578888999999999
Q ss_pred EcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc----------CCeeeEE
Q psy14906 440 NIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD----------NGISFFR 509 (583)
Q Consensus 440 d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----------~~v~~~~ 509 (583)
+++.+........ ..-.-.++|++..+|....+.|+-+|.+.|..++.+..+.-..++.+ ..|++++
T Consensus 182 nL~n~~te~k~~~---SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~ 258 (347)
T KOG0647|consen 182 NLENPPTEFKRIE---SPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIA 258 (347)
T ss_pred EcCCCcchhhhhc---CcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceE
Confidence 9987655443322 23456789999999998889999999999999987522222222221 2578899
Q ss_pred eccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEE
Q psy14906 510 THQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITA 562 (583)
Q Consensus 510 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~ 562 (583)
|+|.-..|++++.||++.+||-+....+...+.|..+|++.+|+.+|.++|-+
T Consensus 259 FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 259 FHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred eecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEE
Confidence 99999999999999999999999988888888999999999999999998755
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.4e-30 Score=221.62 Aligned_cols=293 Identities=18% Similarity=0.291 Sum_probs=230.9
Q ss_pred CcEEEEEcCCCcEEEEeeccCCceEEecccC-CcceEEEeeCCCCCEEEEEe-cCCeEEEEEccCCceeEEEeccCCCeE
Q psy14906 131 SNVKVWDIKAEETYLELSFDNDTFKIMGKRW-NSCVNVLEPSPVVDIIGVGL-SNKKIILHNILTDESLMEFIQTWGPVT 208 (583)
Q Consensus 131 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~v~ 208 (583)
.++.+||+.+|....+++ +. ...-.++..- .+.+++++. ....+.+|.+..........--.++|.
T Consensus 18 ~~~~~~dl~TGt~~~~yk-----------g~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~ 85 (476)
T KOG0646|consen 18 INCIVWDLRTGTSLLQYK-----------GSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVH 85 (476)
T ss_pred cceeEEecCCCceeEEec-----------Ccccccchhhhhh-chhheeeecccCccccccccCchhhhhhhccccccee
Confidence 569999999999888886 22 1111111111 235665554 445799999876555443333348999
Q ss_pred EEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccC-----CCCC
Q psy14906 209 ALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK-----ADGN 283 (583)
Q Consensus 209 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~-----~~~~ 283 (583)
+++-+|+|. +|+.|+..|.+++|.+.+|+++..+ .+|-..|+++.|+.||.+|++|+.||.|.+|.+-. .+..
T Consensus 86 al~s~n~G~-~l~ag~i~g~lYlWelssG~LL~v~-~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~ 163 (476)
T KOG0646|consen 86 ALASSNLGY-FLLAGTISGNLYLWELSSGILLNVL-SAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHS 163 (476)
T ss_pred eeecCCCce-EEEeecccCcEEEEEeccccHHHHH-HhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCC
Confidence 999999998 7888889999999999999999999 89999999999999999999999999999997621 2225
Q ss_pred ceeeEEeccCCCCCeeEEEeeC-CCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccc
Q psy14906 284 GRLLRIREGHSAPPNYIQFYGN-SSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVS 362 (583)
Q Consensus 284 ~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (583)
..++..+..|.-+|+.+...+- ...++++++.|.++++||+..+..+..+..+
T Consensus 164 ~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp-------------------------- 217 (476)
T KOG0646|consen 164 VKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFP-------------------------- 217 (476)
T ss_pred ccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecC--------------------------
Confidence 6778889999999999988752 3478999999999999999988766554222
Q ss_pred eeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcc
Q psy14906 363 QFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQ 442 (583)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~ 442 (583)
..+.+++++|.++.+++|+.+|.|.+.++.
T Consensus 218 --------------------------------------------------~si~av~lDpae~~~yiGt~~G~I~~~~~~ 247 (476)
T KOG0646|consen 218 --------------------------------------------------SSIKAVALDPAERVVYIGTEEGKIFQNLLF 247 (476)
T ss_pred --------------------------------------------------CcceeEEEcccccEEEecCCcceEEeeehh
Confidence 569999999999999999999999998875
Q ss_pred cCc--cc---------cccCCCCCCCccc--CeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee-ccCCeeeE
Q psy14906 443 SGA--HR---------GSYGHDNQPGHVG--GVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFF 508 (583)
Q Consensus 443 ~~~--~~---------~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~ 508 (583)
.-. .. ..-....+.+|.+ .|+|++++-||.+|++|+.||.++|||+.+. ++++.+. ..++|+.+
T Consensus 248 ~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~--Q~iRtl~~~kgpVtnL 325 (476)
T KOG0646|consen 248 KLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSK--QCIRTLQTSKGPVTNL 325 (476)
T ss_pred cCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchH--HHHHHHhhhcccccee
Confidence 432 11 0001112268888 9999999999999999999999999999998 8998888 66899999
Q ss_pred EeccCCc
Q psy14906 509 RTHQESS 515 (583)
Q Consensus 509 ~~s~~~~ 515 (583)
.+.|-.+
T Consensus 326 ~i~~~~~ 332 (476)
T KOG0646|consen 326 QINPLER 332 (476)
T ss_pred Eeecccc
Confidence 8866433
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=207.61 Aligned_cols=265 Identities=23% Similarity=0.326 Sum_probs=215.8
Q ss_pred EEEEEecCCeEEEEEccC------------CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhh
Q psy14906 176 IIGVGLSNKKIILHNILT------------DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI 243 (583)
Q Consensus 176 ~l~~~~~d~~i~iw~~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 243 (583)
.+++|++...|.-+++.- ..++..+..|.+++++++.+ ++ ++++|+.|-+|+|||+.....+..+
T Consensus 3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~-~~aSGssDetI~IYDm~k~~qlg~l 79 (362)
T KOG0294|consen 3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GP-YVASGSSDETIHIYDMRKRKQLGIL 79 (362)
T ss_pred eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ce-eEeccCCCCcEEEEeccchhhhcce
Confidence 356666666665555431 12356677999999999986 55 8999999999999999999999988
Q ss_pred hhccccceEEEEEecCCC--EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEE
Q psy14906 244 KKAHRKVVTGAHFLYNEP--LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321 (583)
Q Consensus 244 ~~~~~~~v~~~~~~~~~~--~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 321 (583)
..|.+.|+++.|.++-. .|++|+.||.|.+|+.. ...++..+++|.+.|+.++.+| .+++.++.+.|+.++.
T Consensus 80 -l~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~----~W~~~~slK~H~~~Vt~lsiHP-S~KLALsVg~D~~lr~ 153 (362)
T KOG0294|consen 80 -LSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVG----SWELLKSLKAHKGQVTDLSIHP-SGKLALSVGGDQVLRT 153 (362)
T ss_pred -eccccceEEEEecCCcchhheeeecCCCcEEEEEcC----CeEEeeeecccccccceeEecC-CCceEEEEcCCceeee
Confidence 78999999999998765 89999999999999665 7899999999999999999998 7999999999999999
Q ss_pred EEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccccee
Q psy14906 322 FNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401 (583)
Q Consensus 322 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 401 (583)
||+.+++....+
T Consensus 154 WNLV~Gr~a~v~-------------------------------------------------------------------- 165 (362)
T KOG0294|consen 154 WNLVRGRVAFVL-------------------------------------------------------------------- 165 (362)
T ss_pred ehhhcCccceee--------------------------------------------------------------------
Confidence 999776431111
Q ss_pred eecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCC
Q psy14906 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ 481 (583)
Q Consensus 402 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg 481 (583)
++ .+. .+.+.|+|.|.+++.++.+
T Consensus 166 --------------------------------------~L---------------~~~--at~v~w~~~Gd~F~v~~~~- 189 (362)
T KOG0294|consen 166 --------------------------------------NL---------------KNK--ATLVSWSPQGDHFVVSGRN- 189 (362)
T ss_pred --------------------------------------cc---------------CCc--ceeeEEcCCCCEEEEEecc-
Confidence 00 111 1227888888877777765
Q ss_pred cEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEe--cCCCcEE
Q psy14906 482 TVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADF--SPDSRWL 559 (583)
Q Consensus 482 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~--s~d~~~l 559 (583)
.|-||.+++. .....+..+..+.++.|- ++..|++|.+|+.|.+||.++..+...+.+|..+|.++.+ .|++.+|
T Consensus 190 ~i~i~q~d~A--~v~~~i~~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~l 266 (362)
T KOG0294|consen 190 KIDIYQLDNA--SVFREIENPKRILCATFL-DGSELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYL 266 (362)
T ss_pred EEEEEecccH--hHhhhhhccccceeeeec-CCceEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEE
Confidence 4888888877 666666666667777765 5778999999999999999999999999999999999984 5678999
Q ss_pred EEEeCCCeEEEEeCCCc
Q psy14906 560 ITASMDCTIRVWDIPSS 576 (583)
Q Consensus 560 ~s~~~d~~i~vw~~~~~ 576 (583)
+|+|.||.|+|||++..
T Consensus 267 vTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 267 VTASSDGFIKVWDIDME 283 (362)
T ss_pred EEeccCceEEEEEcccc
Confidence 99999999999999876
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.9e-30 Score=244.62 Aligned_cols=286 Identities=14% Similarity=0.165 Sum_probs=222.5
Q ss_pred cc-CccEEEE--ccCCCEEEEEe--CCCcEEEEEcCCC------------cEEEEeeccCCceEEecccCCcceEEEeeC
Q psy14906 109 GH-TSPVHLI--LPFGPHLISVD--EESNVKVWDIKAE------------ETYLELSFDNDTFKIMGKRWNSCVNVLEPS 171 (583)
Q Consensus 109 ~h-~~~v~~i--s~~~~~l~s~~--~dg~i~iwd~~~~------------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 171 (583)
+| +..|.++ +|||..+|+|+ .|+.++||+.+.- +.+.+.. .|.+.|+|+.|+
T Consensus 10 ~H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~-----------~h~~sv~CVR~S 78 (942)
T KOG0973|consen 10 NHNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMD-----------DHDGSVNCVRFS 78 (942)
T ss_pred ccCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeec-----------cccCceeEEEEC
Confidence 44 4556666 99999999999 8999999997641 1222222 899999999999
Q ss_pred CCCCEEEEEecCCeEEEEEccC------------------CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q psy14906 172 PVVDIIGVGLSNKKIILHNILT------------------DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWN 233 (583)
Q Consensus 172 ~~~~~l~~~~~d~~i~iw~~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 233 (583)
|||++||+|++|+.|.||.... .+.+..+.+|...|..++|+|++. +|++++.|++|.+||
T Consensus 79 ~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~-~lvS~s~DnsViiwn 157 (942)
T KOG0973|consen 79 PDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDS-LLVSVSLDNSVIIWN 157 (942)
T ss_pred CCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCcc-EEEEecccceEEEEc
Confidence 9999999999999999999772 136677889999999999999999 999999999999999
Q ss_pred CCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC------CCCCeeEEEeeCCC
Q psy14906 234 LEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH------SAPPNYIQFYGNSS 307 (583)
Q Consensus 234 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~ 307 (583)
..+.+.+..+ .+|...|..+.|.|-|++||+-+.|++|++|+.. +....+....+ ...+..+.|+| ||
T Consensus 158 ~~tF~~~~vl-~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~----dw~i~k~It~pf~~~~~~T~f~RlSWSP-DG 231 (942)
T KOG0973|consen 158 AKTFELLKVL-RGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTS----DWGIEKSITKPFEESPLTTFFLRLSWSP-DG 231 (942)
T ss_pred cccceeeeee-ecccccccceEECCccCeeeeecCCceEEEEEcc----cceeeEeeccchhhCCCcceeeecccCC-Cc
Confidence 9999999999 8999999999999999999999999999999743 33333333322 33567899998 89
Q ss_pred CEEEEeeC----CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecC
Q psy14906 308 DNILSAAG----DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTG 383 (583)
Q Consensus 308 ~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (583)
++|++... -.++.|.+-.+-+...
T Consensus 232 ~~las~nA~n~~~~~~~IieR~tWk~~~---------------------------------------------------- 259 (942)
T KOG0973|consen 232 HHLASPNAVNGGKSTIAIIERGTWKVDK---------------------------------------------------- 259 (942)
T ss_pred CeecchhhccCCcceeEEEecCCceeee----------------------------------------------------
Confidence 99998743 1234444332222111
Q ss_pred CceEEEeecCcccccceeeecccccccCCCCceEEEEccC-----C------------cEEEEEecCceEEEEEcccCcc
Q psy14906 384 KNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC-----G------------NFVLIGYSSGHVDRFNIQSGAH 446 (583)
Q Consensus 384 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-----~------------~~l~~~~~dg~i~i~d~~~~~~ 446 (583)
..-+|..++.++.|+|. . -.+|+|+.|++|.||.....++
T Consensus 260 -----------------------~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RP 316 (942)
T KOG0973|consen 260 -----------------------DLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRP 316 (942)
T ss_pred -----------------------eeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCc
Confidence 11122355666666652 1 1678899999999999877776
Q ss_pred ccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 447 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
+.... .--...|..++|+|||..|+.++.||+|.+..++..
T Consensus 317 l~vi~----~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee~ 357 (942)
T KOG0973|consen 317 LFVIH----NLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEEK 357 (942)
T ss_pred hhhhh----hhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcchH
Confidence 65542 334678999999999999999999999999988653
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=220.20 Aligned_cols=278 Identities=15% Similarity=0.195 Sum_probs=228.0
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeE----E-------------E-eccCCCeEEEEEecCCCCEEE
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLM----E-------------F-IQTWGPVTALSFRTDGPPMMV 221 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~----~-------------~-~~~~~~v~~~~~~~~~~~~l~ 221 (583)
.|..++.+++++||..+..+++.+++|.-|++.+++... + - ..|...+.+++.++||+ +|+
T Consensus 140 ~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgk-yla 218 (479)
T KOG0299|consen 140 KHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGK-YLA 218 (479)
T ss_pred cccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCc-EEE
Confidence 889999999999999999999999999999998876331 1 1 26778899999999999 999
Q ss_pred EEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEE
Q psy14906 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ 301 (583)
Q Consensus 222 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~ 301 (583)
+|+.|..|.||+.++.+.++.+ .+|.+.|.+++|-.....|++++.|+++++|+++ ....+.++.+|.+.|..+.
T Consensus 219 tgg~d~~v~Iw~~~t~ehv~~~-~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~----~~s~vetlyGHqd~v~~Id 293 (479)
T KOG0299|consen 219 TGGRDRHVQIWDCDTLEHVKVF-KGHRGAVSSLAFRKGTSELYSASADRSVKVWSID----QLSYVETLYGHQDGVLGID 293 (479)
T ss_pred ecCCCceEEEecCcccchhhcc-cccccceeeeeeecCccceeeeecCCceEEEehh----HhHHHHHHhCCccceeeec
Confidence 9999999999999999999998 8999999999999888899999999999999887 5667788999999999998
Q ss_pred EeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEe
Q psy14906 302 FYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIH 381 (583)
Q Consensus 302 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (583)
... -++.+-+|+.|+++++|++......-.
T Consensus 294 aL~-reR~vtVGgrDrT~rlwKi~eesqlif------------------------------------------------- 323 (479)
T KOG0299|consen 294 ALS-RERCVTVGGRDRTVRLWKIPEESQLIF------------------------------------------------- 323 (479)
T ss_pred hhc-ccceEEeccccceeEEEeccccceeee-------------------------------------------------
Confidence 874 455555566999999999844321110
Q ss_pred cCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCC-------C
Q psy14906 382 TGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHD-------N 454 (583)
Q Consensus 382 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~ 454 (583)
..+...+.|++|-.+ ..+++|+.+|.|.+|++.+.+++...... .
T Consensus 324 ---------------------------rg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~ 375 (479)
T KOG0299|consen 324 ---------------------------RGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELD 375 (479)
T ss_pred ---------------------------eCCCCCeeeEEEecc-cceeeccCCceEEEeeecccCceeEeeccccccCCcc
Confidence 001156778888654 57889999999999999998887765321 0
Q ss_pred CCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCC--CCceEEeeccCCeeeEEeccCCcEEEEEe
Q psy14906 455 QPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG--KPPLRSIKLDNGISFFRTHQESSMLAVCL 521 (583)
Q Consensus 455 ~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 521 (583)
...+...|++++..|...++++|+.+|.|++|.+..+. ..++..+...+-|++++|+++|+.+++|.
T Consensus 376 ~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivagi 444 (479)
T KOG0299|consen 376 PVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAGI 444 (479)
T ss_pred ccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEec
Confidence 01223489999999999999999999999999998873 24556667778899999999999766653
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=234.27 Aligned_cols=208 Identities=14% Similarity=0.255 Sum_probs=170.4
Q ss_pred eecccCccEEEE--cc-CCCEEEEEeCCCcEEEEEcCCCc-------EEEEeeccCCceEEecccCCcceEEEeeCCCC-
Q psy14906 106 TYKGHTSPVHLI--LP-FGPHLISVDEESNVKVWDIKAEE-------TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVV- 174 (583)
Q Consensus 106 ~~~~h~~~v~~i--s~-~~~~l~s~~~dg~i~iwd~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~- 174 (583)
.+.+|.+.|.++ +| ++++|++++.|++|++||+.++. .+..+. +|...|.+++|+|++
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~-----------gH~~~V~~l~f~P~~~ 138 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQ-----------GHTKKVGIVSFHPSAM 138 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEec-----------CCCCcEEEEEeCcCCC
Confidence 478999999997 78 78999999999999999998753 344554 899999999999985
Q ss_pred CEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccc-eEE
Q psy14906 175 DIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKV-VTG 253 (583)
Q Consensus 175 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~-v~~ 253 (583)
++|++++.|++|+|||+.+++.+..+..|...|.+++|+|++. +|++++.|+.|++||+++++.+..+ .+|.+. +..
T Consensus 139 ~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~-lLatgs~Dg~IrIwD~rsg~~v~tl-~~H~~~~~~~ 216 (493)
T PTZ00421 139 NVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGS-LLCTTSKDKKLNIIDPRDGTIVSSV-EAHASAKSQR 216 (493)
T ss_pred CEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCC-EEEEecCCCEEEEEECCCCcEEEEE-ecCCCCcceE
Confidence 6999999999999999999999999999999999999999998 9999999999999999999988887 678764 456
Q ss_pred EEEecCCCEEEEEe----CCCeEEEEEccCCCCCceeeEEeccCC-CCCeeEEEeeCCCCEEEEee-CCCcEEEEEcccc
Q psy14906 254 AHFLYNEPLLVTSS----PDNTLKLWIFDKADGNGRLLRIREGHS-APPNYIQFYGNSSDNILSAA-GDSTLRIFNTKSE 327 (583)
Q Consensus 254 ~~~~~~~~~l~s~~----~d~~i~~w~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~ 327 (583)
+.|.+++..+++++ .|+.|++||+... ...+.....+. ..+....|++ ++++|++++ .|+.|++||+.++
T Consensus 217 ~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~---~~p~~~~~~d~~~~~~~~~~d~-d~~~L~lggkgDg~Iriwdl~~~ 292 (493)
T PTZ00421 217 CLWAKRKDLIITLGCSKSQQRQIMLWDTRKM---ASPYSTVDLDQSSALFIPFFDE-DTNLLYIGSKGEGNIRCFELMNE 292 (493)
T ss_pred EEEcCCCCeEEEEecCCCCCCeEEEEeCCCC---CCceeEeccCCCCceEEEEEcC-CCCEEEEEEeCCCeEEEEEeeCC
Confidence 78899888887765 4789999977532 22333333333 3344455665 788888887 5999999999877
Q ss_pred ccc
Q psy14906 328 TSN 330 (583)
Q Consensus 328 ~~~ 330 (583)
...
T Consensus 293 ~~~ 295 (493)
T PTZ00421 293 RLT 295 (493)
T ss_pred ceE
Confidence 643
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-28 Score=234.49 Aligned_cols=250 Identities=13% Similarity=0.144 Sum_probs=193.0
Q ss_pred EeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCC-CCEEEEEecCCeEEEEEccCCc--------ee
Q psy14906 127 VDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV-VDIIGVGLSNKKIILHNILTDE--------SL 197 (583)
Q Consensus 127 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~iw~~~~~~--------~~ 197 (583)
|+.++.|++|+......+..+. +|.+.|.+++|+|+ +++||+|+.|++|++||+.++. ++
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~-----------gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~ 118 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLK-----------GHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQ 118 (568)
T ss_pred CCceeEEEeeecCCCceEEEEc-----------CCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccce
Confidence 4567889999988877777776 99999999999997 7899999999999999997642 34
Q ss_pred EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEc
Q psy14906 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIF 277 (583)
Q Consensus 198 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~ 277 (583)
..+.+|...|.+++|+|++..+|++++.|++|++||+++++.+..+ .|...|.+++|+|+|.+|++++.|+.|++||+
T Consensus 119 ~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i--~~~~~V~SlswspdG~lLat~s~D~~IrIwD~ 196 (568)
T PTZ00420 119 CILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQI--NMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDP 196 (568)
T ss_pred EEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEE--ecCCcEEEEEECCCCCEEEEEecCCEEEEEEC
Confidence 5678899999999999999866789999999999999998877666 36678999999999999999999999999976
Q ss_pred cCCCCCceeeEEeccCCCCCeeEEE-----eeCCCCEEEEeeCCC----cEEEEEcccc-ccceeeccchhhhhhhhhhc
Q psy14906 278 DKADGNGRLLRIREGHSAPPNYIQF-----YGNSSDNILSAAGDS----TLRIFNTKSE-TSNKNLGIASANRNNLKRKN 347 (583)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~v~~~~~-----~~~~~~~l~~~~~dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~ 347 (583)
. .+..+..+.+|.+.+....+ ++ ++.+|++++.|+ +|++||++.. ..+..+.
T Consensus 197 R----sg~~i~tl~gH~g~~~s~~v~~~~fs~-d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~------------- 258 (568)
T PTZ00420 197 R----KQEIASSFHIHDGGKNTKNIWIDGLGG-DDNYILSTGFSKNNMREMKLWDLKNTTSALVTMS------------- 258 (568)
T ss_pred C----CCcEEEEEecccCCceeEEEEeeeEcC-CCCEEEEEEcCCCCccEEEEEECCCCCCceEEEE-------------
Confidence 5 45667788899877654433 34 678889888764 7999998852 2222110
Q ss_pred chhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEE
Q psy14906 348 RLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFV 427 (583)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 427 (583)
+.. ....+......+++.++
T Consensus 259 --------------------------------------------ld~----------------~~~~L~p~~D~~tg~l~ 278 (568)
T PTZ00420 259 --------------------------------------------IDN----------------ASAPLIPHYDESTGLIY 278 (568)
T ss_pred --------------------------------------------ecC----------------CccceEEeeeCCCCCEE
Confidence 000 00222333335568899
Q ss_pred EEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC
Q psy14906 428 LIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN 471 (583)
Q Consensus 428 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 471 (583)
++|..|+.|++|++..+. ...+.. ..+..+..+++|.|+.
T Consensus 279 lsGkGD~tIr~~e~~~~~-~~~l~~---~~s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 279 LIGKGDGNCRYYQHSLGS-IRKVNE---YKSCSPFRSFGFLPKQ 318 (568)
T ss_pred EEEECCCeEEEEEccCCc-EEeecc---cccCCCccceEEcccc
Confidence 999999999999998764 222321 2467788899999965
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-28 Score=189.70 Aligned_cols=293 Identities=14% Similarity=0.185 Sum_probs=230.7
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccC------Cc---------eeEEEeccCCCeEEEEEecCCCCEEEEEc
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILT------DE---------SLMEFIQTWGPVTALSFRTDGPPMMVSGS 224 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~------~~---------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 224 (583)
.....|.+++|+|.|.+.|+|+...+++|.-... +. ..++-+.|.+.|+|.+|+|+|+ ++++|+
T Consensus 30 ~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~ge-liatgs 108 (350)
T KOG0641|consen 30 EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGE-LIATGS 108 (350)
T ss_pred cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccC-eEEecC
Confidence 4567899999999999999999999988864321 10 1122347889999999999999 999999
Q ss_pred CCCcEEEEeCCCCeeh-----hhhhhccccceEEEEEecC----CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCC
Q psy14906 225 NTGHLTVWNLEDRQVE-----NQIKKAHRKVVTGAHFLYN----EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA 295 (583)
Q Consensus 225 ~dg~i~vwd~~~~~~~-----~~~~~~~~~~v~~~~~~~~----~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~ 295 (583)
.|.+|++.-.+...+. ..+ .-|.+.|..++|..+ +.+|++++ .|..+||-.+.. .++.+..+.+|.+
T Consensus 109 ndk~ik~l~fn~dt~~~~g~dle~-nmhdgtirdl~fld~~~s~~~il~s~g-agdc~iy~tdc~--~g~~~~a~sghtg 184 (350)
T KOG0641|consen 109 NDKTIKVLPFNADTCNATGHDLEF-NMHDGTIRDLAFLDDPESGGAILASAG-AGDCKIYITDCG--RGQGFHALSGHTG 184 (350)
T ss_pred CCceEEEEecccccccccCcceee-eecCCceeeeEEecCCCcCceEEEecC-CCcceEEEeecC--CCCcceeecCCcc
Confidence 9999999766543221 223 458899999999754 45677765 355566644543 6677889999999
Q ss_pred CCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccc
Q psy14906 296 PPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWN 375 (583)
Q Consensus 296 ~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (583)
.|.++--- ++-++++|+.|.+|++||++-..++..+.....
T Consensus 185 hilalysw--n~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~------------------------------------- 225 (350)
T KOG0641|consen 185 HILALYSW--NGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFH------------------------------------- 225 (350)
T ss_pred cEEEEEEe--cCcEEEccCCCceEEEEeeeccceeeeccCccc-------------------------------------
Confidence 98876432 688999999999999999987766655422100
Q ss_pred cEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCC
Q psy14906 376 NIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQ 455 (583)
Q Consensus 376 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 455 (583)
.. ......+.+++..|.|++|++|..|....+||++.++.++.+
T Consensus 226 --------------------~~-----------glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f----- 269 (350)
T KOG0641|consen 226 --------------------DG-----------GLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRF----- 269 (350)
T ss_pred --------------------CC-----------CcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeee-----
Confidence 00 000157899999999999999999999999999999999999
Q ss_pred CCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCC---ceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEcc
Q psy14906 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP---PLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 456 ~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 532 (583)
..|...|+|+.|+|...++++++.|..|++-|+...... .+..-++...+..+.|+|..--+++.+.|.++.+|-+.
T Consensus 270 ~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 270 HPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred CCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 799999999999999999999999999999999764322 22334566788899999999999999999999999764
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=229.75 Aligned_cols=283 Identities=19% Similarity=0.287 Sum_probs=235.4
Q ss_pred eeeeeecccCccEEEE-ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEE-EeeCC-CCCEEE
Q psy14906 102 DIVGTYKGHTSPVHLI-LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNV-LEPSP-VVDIIG 178 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i-s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~-~~~~l~ 178 (583)
++...+.||..-|..+ .-++-.++++++||++++|+-..++.+....+. ++.+.|.+ ++|-+ ++-.|+
T Consensus 5 ~ls~~l~gH~~DVr~v~~~~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~---------~~~g~i~~~i~y~e~~~~~l~ 75 (745)
T KOG0301|consen 5 KLSHELEGHKSDVRAVAVTDGVCIISGSRDGTVKVWAKKGKQYLETHAFE---------GPKGFIANSICYAESDKGRLV 75 (745)
T ss_pred eeEEEeccCccchheeEecCCeEEeecCCCCceeeeeccCcccccceecc---------cCcceeeccceeccccCcceE
Confidence 4567889999998887 666778999999999999998777766544433 67777777 77775 555799
Q ss_pred EEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEec
Q psy14906 179 VGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLY 258 (583)
Q Consensus 179 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 258 (583)
+|+.|+.|.+|.....+++..+.+|+..|.+++...++. +++|+.|.++++|-. +++...+ .+|+..|.++...|
T Consensus 76 ~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~--~iSgSWD~TakvW~~--~~l~~~l-~gH~asVWAv~~l~ 150 (745)
T KOG0301|consen 76 VGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT--LISGSWDSTAKVWRI--GELVYSL-QGHTASVWAVASLP 150 (745)
T ss_pred eecccceEEEEecCCCCchhhhhccccceeeeecCCcCc--eEecccccceEEecc--hhhhccc-CCcchheeeeeecC
Confidence 999999999999999999999999999999999888875 899999999999975 4666667 89999999999999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchh
Q psy14906 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 338 (583)
++ .++||+.|.+|++| . .++.++++.+|.+-|+.+++.+ +..+++++.||.|++|++. +.++..+
T Consensus 151 e~-~~vTgsaDKtIklW--k----~~~~l~tf~gHtD~VRgL~vl~--~~~flScsNDg~Ir~w~~~-ge~l~~~----- 215 (745)
T KOG0301|consen 151 EN-TYVTGSADKTIKLW--K----GGTLLKTFSGHTDCVRGLAVLD--DSHFLSCSNDGSIRLWDLD-GEVLLEM----- 215 (745)
T ss_pred CC-cEEeccCcceeeec--c----CCchhhhhccchhheeeeEEec--CCCeEeecCCceEEEEecc-Cceeeee-----
Confidence 88 78999999999999 4 4678899999999999999984 5689999999999999994 4433322
Q ss_pred hhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEE
Q psy14906 339 NRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCV 418 (583)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 418 (583)
.+|...+.++
T Consensus 216 ----------------------------------------------------------------------~ghtn~vYsi 225 (745)
T KOG0301|consen 216 ----------------------------------------------------------------------HGHTNFVYSI 225 (745)
T ss_pred ----------------------------------------------------------------------eccceEEEEE
Confidence 1122568888
Q ss_pred EEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 419 YITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 419 ~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
...+++..++++++|+++++|+.. ++.+.+ .-....|+++.+-++|. +++|+.||.|+||..+..
T Consensus 226 s~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I-----~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k~ 290 (745)
T KOG0301|consen 226 SMALSDGLIVSTGEDRTLRIWKKD--ECVQVI-----TLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDKD 290 (745)
T ss_pred EecCCCCeEEEecCCceEEEeecC--ceEEEE-----ecCccceEEEEEeeCCC-EEEeccCceEEEEEeccc
Confidence 888999999999999999999976 566665 33345899999988887 677888999999987643
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-29 Score=206.39 Aligned_cols=301 Identities=15% Similarity=0.215 Sum_probs=219.2
Q ss_pred eeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEE--EEeeccCCceEEecccCCcceEEEeeCCCCCEEEE
Q psy14906 104 VGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETY--LELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV 179 (583)
Q Consensus 104 ~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 179 (583)
+..|++|.+.|+++ +.||++||+++.|+.|++|+++.-+.. +.+... -.-+..+.++|+||-+-+++
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~n---------ve~dhpT~V~FapDc~s~vv 149 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQN---------VEYDHPTRVVFAPDCKSVVV 149 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhcc---------ccCCCceEEEECCCcceEEE
Confidence 55688999999987 999999999999999999999873211 111100 11235678999999887666
Q ss_pred Eec-CCeEEEEEccCC---ceeEE---------EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhc
Q psy14906 180 GLS-NKKIILHNILTD---ESLME---------FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA 246 (583)
Q Consensus 180 ~~~-d~~i~iw~~~~~---~~~~~---------~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 246 (583)
... ..++++|.+... ..... -+.|.-.+..+-...++. ++++++.|..|.+|++. |+.+..+ ..
T Consensus 150 ~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k-~imsas~dt~i~lw~lk-Gq~L~~i-dt 226 (420)
T KOG2096|consen 150 SVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAK-YIMSASLDTKICLWDLK-GQLLQSI-DT 226 (420)
T ss_pred EEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCce-EEEEecCCCcEEEEecC-Cceeeee-cc
Confidence 544 457999987532 11111 123445666666666777 89999999999999998 8888888 55
Q ss_pred cccceEEEEEecCCCEEEEEeCCCeEEEEEccCC-CC---CceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEE
Q psy14906 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA-DG---NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322 (583)
Q Consensus 247 ~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~-~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 322 (583)
....-+..+.+|+|+++++++.--.|++|.+-.. ++ +......+.||...|..++|++ +..++++.+.||++++|
T Consensus 227 nq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn-~S~r~vtvSkDG~wriw 305 (420)
T KOG2096|consen 227 NQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSN-SSTRAVTVSKDGKWRIW 305 (420)
T ss_pred ccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCC-CcceeEEEecCCcEEEe
Confidence 5666677899999999999999999999965221 11 2234456899999999999996 89999999999999999
Q ss_pred EccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceee
Q psy14906 323 NTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFL 402 (583)
Q Consensus 323 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 402 (583)
|..-......- ... + .
T Consensus 306 dtdVrY~~~qD---------------------pk~-----------------------------L--------------k 321 (420)
T KOG2096|consen 306 DTDVRYEAGQD---------------------PKI-----------------------------L--------------K 321 (420)
T ss_pred eccceEecCCC---------------------chH-----------------------------h--------------h
Confidence 97532211100 000 0 0
Q ss_pred ecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCc
Q psy14906 403 VPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482 (583)
Q Consensus 403 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~ 482 (583)
...............+.++|.|+.|++... ..+++|..++++....+. ..|...|.+++|+++|+++++++ |..
T Consensus 322 ~g~~pl~aag~~p~RL~lsP~g~~lA~s~g-s~l~~~~se~g~~~~~~e----~~h~~~Is~is~~~~g~~~atcG-dr~ 395 (420)
T KOG2096|consen 322 EGSAPLHAAGSEPVRLELSPSGDSLAVSFG-SDLKVFASEDGKDYPELE----DIHSTTISSISYSSDGKYIATCG-DRY 395 (420)
T ss_pred cCCcchhhcCCCceEEEeCCCCcEEEeecC-CceEEEEcccCccchhHH----HhhcCceeeEEecCCCcEEeeec-cee
Confidence 000000111144558999999999988654 459999999998888776 68999999999999999999998 567
Q ss_pred EEEEE
Q psy14906 483 VKVWH 487 (583)
Q Consensus 483 i~iwd 487 (583)
+++..
T Consensus 396 vrv~~ 400 (420)
T KOG2096|consen 396 VRVIR 400 (420)
T ss_pred eeeec
Confidence 77765
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-29 Score=218.41 Aligned_cols=277 Identities=17% Similarity=0.238 Sum_probs=224.1
Q ss_pred CeEEEEEccCCceeEEEecc-CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCE
Q psy14906 184 KKIILHNILTDESLMEFIQT-WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPL 262 (583)
Q Consensus 184 ~~i~iw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 262 (583)
.++.+||+++|....++++. ...-.++..- .+.+++++-.....+.+|.+......... .--.++|.+++-+|+|.+
T Consensus 18 ~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~q~-~v~Pg~v~al~s~n~G~~ 95 (476)
T KOG0646|consen 18 INCIVWDLRTGTSLLQYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVVQY-IVLPGPVHALASSNLGYF 95 (476)
T ss_pred cceeEEecCCCceeEEecCcccccchhhhhh-chhheeeecccCccccccccCchhhhhhh-cccccceeeeecCCCceE
Confidence 46999999999999998865 2222222221 22434555455668999999866555433 346788999999999999
Q ss_pred EEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhh
Q psy14906 263 LVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNN 342 (583)
Q Consensus 263 l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 342 (583)
|+.|+..|.+.+|.+. .+.++..+..|...|+++.|+ .|+.+|++++.||.|.+|.+..-
T Consensus 96 l~ag~i~g~lYlWels----sG~LL~v~~aHYQ~ITcL~fs-~dgs~iiTgskDg~V~vW~l~~l--------------- 155 (476)
T KOG0646|consen 96 LLAGTISGNLYLWELS----SGILLNVLSAHYQSITCLKFS-DDGSHIITGSKDGAVLVWLLTDL--------------- 155 (476)
T ss_pred EEeecccCcEEEEEec----cccHHHHHHhhccceeEEEEe-CCCcEEEecCCCccEEEEEEEee---------------
Confidence 9999899999999665 678888899999999999999 48999999999999999997431
Q ss_pred hhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc
Q psy14906 343 LKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH 422 (583)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 422 (583)
T Consensus 156 -------------------------------------------------------------------------------- 155 (476)
T KOG0646|consen 156 -------------------------------------------------------------------------------- 155 (476)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCC--CcEEEEeecCCcEEEEEccCCCCCceEEee
Q psy14906 423 CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNL--NQIVISGGNDQTVKVWHFKQTGKPPLRSIK 500 (583)
Q Consensus 423 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 500 (583)
+....++ +-++...+ ..|.-+|+++...+. ..+|+|++.|.++++||+..+ .++..+.
T Consensus 156 -----v~a~~~~--------~~~p~~~f-----~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g--~LLlti~ 215 (476)
T KOG0646|consen 156 -----VSADNDH--------SVKPLHIF-----SDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLG--VLLLTIT 215 (476)
T ss_pred -----cccccCC--------Cccceeee-----ccCcceeEEEEecCCCccceEEEecCCceEEEEEeccc--eeeEEEe
Confidence 1111111 22333444 689999999988765 358999999999999999999 9999999
Q ss_pred ccCCeeeEEeccCCcEEEEEeCCceEEEEEcccc----------------ceEEeeccccc--ceeeEEecCCCcEEEEE
Q psy14906 501 LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTC----------------TIIRKLSGHMG--QLTDADFSPDSRWLITA 562 (583)
Q Consensus 501 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~----------------~~~~~~~~h~~--~v~~l~~s~d~~~l~s~ 562 (583)
.+..+.+++..|.++.+++|+.+|.|.+.++... ..+..+.||.+ .|+|++.+-||..|++|
T Consensus 216 fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSG 295 (476)
T KOG0646|consen 216 FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSG 295 (476)
T ss_pred cCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEee
Confidence 9999999999999999999999999999887432 24566788988 99999999999999999
Q ss_pred eCCCeEEEEeCCCccccccc
Q psy14906 563 SMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 563 ~~d~~i~vw~~~~~~~~~~~ 582 (583)
+.||.++|||+.+.++++++
T Consensus 296 d~dg~VcvWdi~S~Q~iRtl 315 (476)
T KOG0646|consen 296 DEDGKVCVWDIYSKQCIRTL 315 (476)
T ss_pred CCCCCEEEEecchHHHHHHH
Confidence 99999999999999999875
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.4e-29 Score=227.31 Aligned_cols=237 Identities=20% Similarity=0.265 Sum_probs=206.8
Q ss_pred cEEEeecCCCCCCeEEEEe-eC-eEEEEEcCCeEEEEeccce---eeeeecccCccEEE-E--c-cCCCEEEEEeCCCcE
Q psy14906 63 FKLLSVSPQHEDDITCLSS-DF-FHIYTSANNIIYAWRRGID---IVGTYKGHTSPVHL-I--L-PFGPHLISVDEESNV 133 (583)
Q Consensus 63 ~~~~~~~~~h~~~v~~~~~-~~-~~~~~~~~~~i~vw~~~~~---~~~~~~~h~~~v~~-i--s-~~~~~l~s~~~dg~i 133 (583)
.++.+.+.+|+..|..++. ++ .++.++.|+++++|+..++ ....+++|.+.|.. + . .++-.|++|+.|.+|
T Consensus 4 Y~ls~~l~gH~~DVr~v~~~~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i 83 (745)
T KOG0301|consen 4 YKLSHELEGHKSDVRAVAVTDGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTI 83 (745)
T ss_pred ceeEEEeccCccchheeEecCCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceE
Confidence 4567889999999998887 44 5788889999999996432 23457788888776 4 3 345579999999999
Q ss_pred EEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEe
Q psy14906 134 KVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFR 213 (583)
Q Consensus 134 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~ 213 (583)
.+|...+.+.+.++. +|...|.|+....++. +++|+.|.++++|-. +++...+.+|+..|+++++-
T Consensus 84 ~v~~~~~~~P~~~Lk-----------gH~snVC~ls~~~~~~-~iSgSWD~TakvW~~--~~l~~~l~gH~asVWAv~~l 149 (745)
T KOG0301|consen 84 IVFKLSQAEPLYTLK-----------GHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI--GELVYSLQGHTASVWAVASL 149 (745)
T ss_pred EEEecCCCCchhhhh-----------ccccceeeeecCCcCc-eEecccccceEEecc--hhhhcccCCcchheeeeeec
Confidence 999999999999998 9999999999888887 999999999999985 67777899999999999999
Q ss_pred cCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC
Q psy14906 214 TDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH 293 (583)
Q Consensus 214 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~ 293 (583)
|++. +++|+.|.+|++|.- ++.++++ .+|.+.|..+++.+++ .|++++.||.|++|++ .+..+..+.+|
T Consensus 150 ~e~~--~vTgsaDKtIklWk~--~~~l~tf-~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-----~ge~l~~~~gh 218 (745)
T KOG0301|consen 150 PENT--YVTGSADKTIKLWKG--GTLLKTF-SGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-----DGEVLLEMHGH 218 (745)
T ss_pred CCCc--EEeccCcceeeeccC--Cchhhhh-ccchhheeeeEEecCC-CeEeecCCceEEEEec-----cCceeeeeecc
Confidence 9984 899999999999985 7889999 8999999999999875 4789999999999977 57888999999
Q ss_pred CCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcc
Q psy14906 294 SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325 (583)
Q Consensus 294 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 325 (583)
+..++++...+ +++.++++++|+++++|+..
T Consensus 219 tn~vYsis~~~-~~~~Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 219 TNFVYSISMAL-SDGLIVSTGEDRTLRIWKKD 249 (745)
T ss_pred ceEEEEEEecC-CCCeEEEecCCceEEEeecC
Confidence 99999999765 68899999999999999976
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-28 Score=201.51 Aligned_cols=291 Identities=15% Similarity=0.171 Sum_probs=218.3
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCcee--EEE--eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL--MEF--IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~--~~~--~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 235 (583)
+|.+.|++++|+.||+.||+++.|+.|++|+++..+.. +.+ .-.-+-.+.+.|.||-+.++++.-...++++|.+.
T Consensus 84 gH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~ 163 (420)
T KOG2096|consen 84 GHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLV 163 (420)
T ss_pred ccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEee
Confidence 99999999999999999999999999999999753211 111 11123568899999998777777777889999875
Q ss_pred CCe---eh--------hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEee
Q psy14906 236 DRQ---VE--------NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304 (583)
Q Consensus 236 ~~~---~~--------~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 304 (583)
..+ .. ..+..-|...+..+....++.+|++++.|..|.+|++ .++.+.........-+..+.+|
T Consensus 164 K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~l-----kGq~L~~idtnq~~n~~aavSP 238 (420)
T KOG2096|consen 164 KKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDL-----KGQLLQSIDTNQSSNYDAAVSP 238 (420)
T ss_pred ecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEec-----CCceeeeeccccccccceeeCC
Confidence 322 11 1122456667778888888999999999999999976 4677777666666667778887
Q ss_pred CCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCC
Q psy14906 305 NSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGK 384 (583)
Q Consensus 305 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (583)
+|+++++++..--+++|.+--+
T Consensus 239 -~GRFia~~gFTpDVkVwE~~f~--------------------------------------------------------- 260 (420)
T KOG2096|consen 239 -DGRFIAVSGFTPDVKVWEPIFT--------------------------------------------------------- 260 (420)
T ss_pred -CCcEEEEecCCCCceEEEEEec---------------------------------------------------------
Confidence 8999998888777888875321
Q ss_pred ceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeE
Q psy14906 385 NKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRG 464 (583)
Q Consensus 385 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~ 464 (583)
. ||++ +.-.....+ .+|...|..
T Consensus 261 -------------------------------------k----------dG~f-----qev~rvf~L-----kGH~saV~~ 283 (420)
T KOG2096|consen 261 -------------------------------------K----------DGTF-----QEVKRVFSL-----KGHQSAVLA 283 (420)
T ss_pred -------------------------------------c----------Ccch-----hhhhhhhee-----ccchhheee
Confidence 1 1111 011112223 799999999
Q ss_pred EEEeCCCcEEEEeecCCcEEEEEccCCC-----CCceEEee-----ccCCeeeEEeccCCcEEEEEeCCceEEEEEcccc
Q psy14906 465 VVSDNLNQIVISGGNDQTVKVWHFKQTG-----KPPLRSIK-----LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTC 534 (583)
Q Consensus 465 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 534 (583)
++|+++...+++.+.||+++|||++-.. ...++... ..+....++++|+|+.||+.... .+++|..++|
T Consensus 284 ~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs-~l~~~~se~g 362 (420)
T KOG2096|consen 284 AAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGS-DLKVFASEDG 362 (420)
T ss_pred eeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCC-ceEEEEcccC
Confidence 9999999999999999999999985321 12222221 12345589999999999987654 7999999998
Q ss_pred ceEEeec-ccccceeeEEecCCCcEEEEEeCCCeEEEEe
Q psy14906 535 TIIRKLS-GHMGQLTDADFSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 535 ~~~~~~~-~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~ 572 (583)
+....++ .|...|.+++|+++|++++|++ |..+++..
T Consensus 363 ~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 363 KDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIR 400 (420)
T ss_pred ccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence 8776654 5889999999999999999997 77788876
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-27 Score=216.30 Aligned_cols=466 Identities=16% Similarity=0.184 Sum_probs=281.0
Q ss_pred eeeeeecccCccEEEE--ccC-CCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEE
Q psy14906 102 DIVGTYKGHTSPVHLI--LPF-GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIG 178 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i--s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 178 (583)
+.+..+.+|...|+.+ +|. ..+||+++.|..|+||.+..|-. ..+.-. ....| +.+-.+.++.|+|..+-|.
T Consensus 70 r~i~~l~~H~d~VtDl~FspF~D~LLAT~S~D~~VKiW~lp~g~~-q~LSap---e~~~g-~~~~~vE~l~fHpTaDgil 144 (1012)
T KOG1445|consen 70 RDIGILAAHGDQVTDLGFSPFADELLATCSRDEPVKIWKLPRGHS-QKLSAP---EIDVG-GGNVIVECLRFHPTADGIL 144 (1012)
T ss_pred cccceeecccceeeccCccccchhhhhcccCCCeeEEEecCCCcc-cccCCc---ceeec-CCceEEEEeecccCcCceE
Confidence 4566788999999997 664 46889999999999999985421 111100 01111 4567899999999877666
Q ss_pred EEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC-Ceehhhhhhccccc-eEEEEE
Q psy14906 179 VGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED-RQVENQIKKAHRKV-VTGAHF 256 (583)
Q Consensus 179 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~-v~~~~~ 256 (583)
..+..|.++|||+.+++.+.++.+|...|.++.|+.||. +|++++.|..|+|||.+. ++.++.. .+|.+. =..+.|
T Consensus 145 ~s~a~g~v~i~D~stqk~~~el~~h~d~vQSa~WseDG~-llatscKdkqirifDPRa~~~piQ~t-e~H~~~rdsRv~w 222 (1012)
T KOG1445|consen 145 ASGAHGSVYITDISTQKTAVELSGHTDKVQSADWSEDGK-LLATSCKDKQIRIFDPRASMEPIQTT-EGHGGMRDSRVLW 222 (1012)
T ss_pred EeccCceEEEEEcccCceeecccCCchhhhccccccCCc-eEeeecCCcceEEeCCccCCCccccc-cccccchhheeee
Confidence 666779999999999999999999999999999999999 999999999999999875 4666666 788653 334677
Q ss_pred ecCCCEEEEEeCC----CeEEEEEccCCCCCceeeEEecc-CCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccce
Q psy14906 257 LYNEPLLVTSSPD----NTLKLWIFDKADGNGRLLRIREG-HSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNK 331 (583)
Q Consensus 257 ~~~~~~l~s~~~d----~~i~~w~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 331 (583)
.-+-..|++.+.+ ..|++||...- +..+.++.- ....+.--.|.|+.+-.+++|-.+.++..+.+...+..-
T Consensus 223 ~Gn~~rlisTGF~~~R~reV~~~Dtr~f---~~p~~tleld~stGvLiPl~DpDt~llfLaGKG~~~l~~lE~~d~qPyL 299 (1012)
T KOG1445|consen 223 AGNWERLISTGFTTKRIREVRAYDTRKF---GAPVHTLELDSSTGVLIPLYDPDTRLLFLAGKGTNKLFMLEMQDRQPYL 299 (1012)
T ss_pred ccchhhhhhcccchhhheeeeeeecccc---CCcceeEEeecccceEeeeecCCCceEEEecCCcceEEEEEecCCCcch
Confidence 6555567776654 67899965432 222233221 122344445666444444555567778777765543200
Q ss_pred e----------------------------------ecc------chhhhhhhhhh----------cch-------h----
Q psy14906 332 N----------------------------------LGI------ASANRNNLKRK----------NRL-------E---- 350 (583)
Q Consensus 332 ~----------------------------------~~~------~~~~~~~~~~~----------~~~-------~---- 350 (583)
. +.. ....+....+. +.. +
T Consensus 300 s~v~~~tle~~~~GA~lvpkral~VM~~EV~rvlQLt~~~ivPi~y~VPRksyrdFH~DLfPeT~G~~p~~~ageWlnG~ 379 (1012)
T KOG1445|consen 300 SHVFELTLEEQTLGATLVPKRALHVMDGEVDRVLQLTKSSIVPIPYIVPRKSYRDFHSDLFPETRGAEPGCTAGEWLNGT 379 (1012)
T ss_pred hhhhhhcchhhhccceecchhhhhhcchhhhhheecccCceeecccccchhhhhhhhhhhCccccCCccCcCccceecCc
Confidence 0 000 00000000000 000 0
Q ss_pred -----c--c--ccccC-------CC--------c-cceeeeeccc------------ccccccEEEEe------------
Q psy14906 351 -----K--M--NEKFI-------LP--------P-VSQFSFGLAR------------EKDWNNIAAIH------------ 381 (583)
Q Consensus 351 -----~--~--~~~~~-------~~--------~-~~~~~~~~~~------------~~~~~~~~~~~------------ 381 (583)
+ + ....+ .| . ...+....+. ..+....-+..
T Consensus 380 Nq~vqKvSl~Pa~r~h~~~pp~~~P~p~~a~t~sf~~v~~ppaaP~~~~n~~~~~~~~Pd~~~qpaV~~~~e~r~l~~~~ 459 (1012)
T KOG1445|consen 380 NQVVQKVSLAPAQRSHSPPPPEPVPTPKVAQTPSFVPVPTPPAAPRPMSNNNSSSNNVPDVQEQPAVPKKEEVRELDYRP 459 (1012)
T ss_pred cccccccccCchhccCCCCCCCCCCCcccccCCCCccccCCCCCCCccccccccccCCCccccCCCcCcchhhhhhcccc
Confidence 0 0 00000 00 0 0000000000 00000000000
Q ss_pred ------------------cCCceEE--------EeecCc--------------ccccceee-------------------
Q psy14906 382 ------------------TGKNKVS--------LWSFYK--------------SKMDDMFL------------------- 402 (583)
Q Consensus 382 ------------------~~~~~i~--------~~~~~~--------------~~~~~~~~------------------- 402 (583)
.....+. +-.... ...+....
T Consensus 460 ~E~~~g~~~~~~dad~~~g~sS~~s~~~~~~~~~~kP~S~plt~~~s~~s~~~P~~~ksvPe~~~~~~g~~~sat~~v~~ 539 (1012)
T KOG1445|consen 460 YEKENGVHTPNADADSTQGNSSPISTISPEPVTIVKPASTPLTDSVSTPSVVGPAFGKSVPEQPPVNFGKPISATNRVPL 539 (1012)
T ss_pred cccccCccCCCcccccccCCCCCccccCCCcccccCCCCcccccccccccccCccccccCCCCCCcccCCCccccccccc
Confidence 0000000 000000 00000000
Q ss_pred ----e--------cccccc-----cC-C------------CCceEEEEccCCcEEEE--EecCceEEEEEcccCcccccc
Q psy14906 403 ----V--------PERCKQ-----AK-Q------------SKPTCVYITHCGNFVLI--GYSSGHVDRFNIQSGAHRGSY 450 (583)
Q Consensus 403 ----~--------~~~~~~-----~~-~------------~~i~~~~~s~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~ 450 (583)
. ...+.. .| . -+-.+=-|+.+..++++ .+..|.|.||++.....+..-
T Consensus 540 s~s~r~~s~v~G~iSKFRH~~Gt~ghks~hi~NLrnln~~~PgEsnGfcan~~rvAVPL~g~gG~iai~el~~PGrLPDg 619 (1012)
T KOG1445|consen 540 SQSVRPKSCVVGQISKFRHVDGTQGHKSAHISNLRNLNTRLPGESNGFCANNKRVAVPLAGSGGVIAIYELNEPGRLPDG 619 (1012)
T ss_pred cccccccceeeccchheeeccCccccchhhhhhhhcccccCCCccCceeeccceEEEEecCCCceEEEEEcCCCCCCCcc
Confidence 0 000000 00 0 01111123334445555 455789999999754332211
Q ss_pred CCCCCCCcccCeeEEEEeC-CCcEEEEeecCCcEEEEEccCCCC-----CceEEee-ccCCeeeEEeccC-CcEEEEEeC
Q psy14906 451 GHDNQPGHVGGVRGVVSDN-LNQIVISGGNDQTVKVWHFKQTGK-----PPLRSIK-LDNGISFFRTHQE-SSMLAVCLD 522 (583)
Q Consensus 451 ~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~-~~~~v~~~~~s~~-~~~l~~~~~ 522 (583)
..+. --....|+.+.|.| |...||.+++||.|++|.+..++. .+...+. |...|+++.|+|- ...|++++.
T Consensus 620 v~p~-l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asy 698 (1012)
T KOG1445|consen 620 VMPG-LFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASY 698 (1012)
T ss_pred cccc-cccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhc
Confidence 1110 13456799999999 667899999999999999976642 2223333 4468999999994 458999999
Q ss_pred CceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccc
Q psy14906 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578 (583)
Q Consensus 523 dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~ 578 (583)
|.+|++||+.+++....+.+|.+.|..++|||||+.+|+.+.||+|+||+-.+++.
T Consensus 699 d~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~ 754 (1012)
T KOG1445|consen 699 DSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQ 754 (1012)
T ss_pred cceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999887653
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-28 Score=203.05 Aligned_cols=273 Identities=18% Similarity=0.261 Sum_probs=211.3
Q ss_pred cCCcceEEEeeCC-CCCEEEEEecCCeEEEEEccC-Ccee-EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q psy14906 160 RWNSCVNVLEPSP-VVDIIGVGLSNKKIILHNILT-DESL-MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED 236 (583)
Q Consensus 160 ~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iw~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 236 (583)
.....|.+++||| ...++++++.|++|++|+++. |..+ +....|.++|.+++|+.||. .+++|+.|+.+++||+.+
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsddgs-kVf~g~~Dk~~k~wDL~S 103 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGS-KVFSGGCDKQAKLWDLAS 103 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCc-eEEeeccCCceEEEEccC
Confidence 4578999999999 556777899999999999986 3333 33457889999999999998 899999999999999999
Q ss_pred CeehhhhhhccccceEEEEEecCCC--EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee
Q psy14906 237 RQVENQIKKAHRKVVTGAHFLYNEP--LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 237 ~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 314 (583)
++.. ++ ..|.++|..+.|-+... .|+||+.|.+|+.||.. ...++.++. ..+.++++..- ..+++.+.
T Consensus 104 ~Q~~-~v-~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R----~~~pv~t~~-LPeRvYa~Dv~---~pm~vVat 173 (347)
T KOG0647|consen 104 GQVS-QV-AAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTR----SSNPVATLQ-LPERVYAADVL---YPMAVVAT 173 (347)
T ss_pred CCee-ee-eecccceeEEEEecCCCcceeEecccccceeecccC----CCCeeeeee-ccceeeehhcc---CceeEEEe
Confidence 9544 45 58999999999988766 89999999999999654 334444443 23456665543 45888888
Q ss_pred CCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCc
Q psy14906 315 GDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYK 394 (583)
Q Consensus 315 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 394 (583)
.++.|.+|+++++......
T Consensus 174 a~r~i~vynL~n~~te~k~------------------------------------------------------------- 192 (347)
T KOG0647|consen 174 AERHIAVYNLENPPTEFKR------------------------------------------------------------- 192 (347)
T ss_pred cCCcEEEEEcCCCcchhhh-------------------------------------------------------------
Confidence 9999999999765432110
Q ss_pred ccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcc---------cCeeEE
Q psy14906 395 SKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHV---------GGVRGV 465 (583)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~---------~~v~~~ 465 (583)
........++|++..+|....+.|+-+|.+.+..+..+.....+.. +.|. ..|++|
T Consensus 193 ------------~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtF---kCHR~~~~~~~~VYaVNsi 257 (347)
T KOG0647|consen 193 ------------IESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTF---KCHRSTNSVNDDVYAVNSI 257 (347)
T ss_pred ------------hcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeE---EEeccCCCCCCceEEecce
Confidence 0000015688999999998889999999999999988643332221 3343 367889
Q ss_pred EEeCCCcEEEEeecCCcEEEEEccCCCCCceEE-eeccCCeeeEEeccCCcEEEEEe
Q psy14906 466 VSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS-IKLDNGISFFRTHQESSMLAVCL 521 (583)
Q Consensus 466 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~ 521 (583)
+|+|....|+|++.||+..+||-+.. ..+.. -.+..+|++..|+.+|.++|.+.
T Consensus 258 ~FhP~hgtlvTaGsDGtf~FWDkdar--~kLk~s~~~~qpItcc~fn~~G~ifaYA~ 312 (347)
T KOG0647|consen 258 AFHPVHGTLVTAGSDGTFSFWDKDAR--TKLKTSETHPQPITCCSFNRNGSIFAYAL 312 (347)
T ss_pred EeecccceEEEecCCceEEEecchhh--hhhhccCcCCCccceeEecCCCCEEEEEe
Confidence 99999999999999999999998776 44444 55678999999999999887653
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-28 Score=199.08 Aligned_cols=270 Identities=15% Similarity=0.161 Sum_probs=215.0
Q ss_pred cCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q psy14906 203 TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282 (583)
Q Consensus 203 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~ 282 (583)
....|..+.|+|.+. .|++++.||.+++||....++...+ .|..++.+++|.+ ...+++|+.||.|+.+|++..
T Consensus 12 P~d~IS~v~f~~~~~-~LLvssWDgslrlYdv~~~~l~~~~--~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~-- 85 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSS-DLLVSSWDGSLRLYDVPANSLKLKF--KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTG-- 85 (323)
T ss_pred ChhceeeEEEcCcCC-cEEEEeccCcEEEEeccchhhhhhe--ecCCceeeeeccC-CceEEEeccCceEEEEEecCC--
Confidence 357899999998888 6777779999999999988766666 6899999999987 457899999999999988543
Q ss_pred CceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccc
Q psy14906 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVS 362 (583)
Q Consensus 283 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (583)
....+..|..++.++.+++ ....+++|+.|++|++||.+.......+...
T Consensus 86 ---~~~~igth~~~i~ci~~~~-~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~-------------------------- 135 (323)
T KOG1036|consen 86 ---NEDQIGTHDEGIRCIEYSY-EVGCVISGSWDKTIKFWDPRNKVVVGTFDQG-------------------------- 135 (323)
T ss_pred ---cceeeccCCCceEEEEeec-cCCeEEEcccCccEEEEeccccccccccccC--------------------------
Confidence 3345667999999999997 5678999999999999999863322211000
Q ss_pred eeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcc
Q psy14906 363 QFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQ 442 (583)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~ 442 (583)
..|. +.+-.|..|++|+.+..+.+||++
T Consensus 136 --------------------------------------------------kkVy--~~~v~g~~LvVg~~~r~v~iyDLR 163 (323)
T KOG1036|consen 136 --------------------------------------------------KKVY--CMDVSGNRLVVGTSDRKVLIYDLR 163 (323)
T ss_pred --------------------------------------------------ceEE--EEeccCCEEEEeecCceEEEEEcc
Confidence 2233 344467899999999999999999
Q ss_pred cCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCC--CceEEeecc----------CCeeeEEe
Q psy14906 443 SGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK--PPLRSIKLD----------NGISFFRT 510 (583)
Q Consensus 443 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~----------~~v~~~~~ 510 (583)
+.....+... ..-.-.++|+++-|++.-.+.++-||.|.+=.++.... .....++.+ .+|++++|
T Consensus 164 n~~~~~q~re---S~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~F 240 (323)
T KOG1036|consen 164 NLDEPFQRRE---SSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAF 240 (323)
T ss_pred cccchhhhcc---ccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEe
Confidence 8766553322 35567899999999888899999999998866655410 111222221 37999999
Q ss_pred ccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEe
Q psy14906 511 HQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 511 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~ 563 (583)
+|--..||+|+.||.|.+||+.+.+.+..+..-...|..++|+.||..||.++
T Consensus 241 hp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~ 293 (323)
T KOG1036|consen 241 HPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIAS 293 (323)
T ss_pred ccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEe
Confidence 99999999999999999999999999999887778899999999999999886
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.5e-27 Score=217.60 Aligned_cols=295 Identities=11% Similarity=0.100 Sum_probs=218.5
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEE-EEEecCCeEEEEEccCCceeEE
Q psy14906 121 GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDII-GVGLSNKKIILHNILTDESLME 199 (583)
Q Consensus 121 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~d~~i~iw~~~~~~~~~~ 199 (583)
++.+++++.|+.|++||+.+++.+..+. .+ ..+.+++|+|+++.+ +++..++.|++||..+++.+..
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~-----------~~-~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 68 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFP-----------VG-QRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGT 68 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEE-----------CC-CCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEe
Confidence 3568889999999999999999888775 33 346789999999976 5667889999999999988877
Q ss_pred EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCC-eEEEEEcc
Q psy14906 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN-TLKLWIFD 278 (583)
Q Consensus 200 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-~i~~w~~~ 278 (583)
+..+ ..+..++|+|+++.+++++..++.+++||+.+++.+..+ . +...+.+++|+|++++++++..++ .+.+|+..
T Consensus 69 ~~~~-~~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~-~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~ 145 (300)
T TIGR03866 69 LPSG-PDPELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEI-P-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTK 145 (300)
T ss_pred ccCC-CCccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEe-e-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCC
Confidence 7665 346788999999844455567899999999988777666 2 234568899999999999888765 45667543
Q ss_pred CCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEe-eCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccC
Q psy14906 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSA-AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFI 357 (583)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (583)
......... ....+..++|+| ++++|+.+ ..++.+++||+.+++....+.....
T Consensus 146 ----~~~~~~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~------------------- 200 (300)
T TIGR03866 146 ----TYEIVDNVL-VDQRPRFAEFTA-DGKELWVSSEIGGTVSVIDVATRKVIKKITFEIP------------------- 200 (300)
T ss_pred ----CCeEEEEEE-cCCCccEEEECC-CCCEEEEEcCCCCEEEEEEcCcceeeeeeeeccc-------------------
Confidence 233333322 223457889997 78877544 5689999999988765443211000
Q ss_pred CCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEE-ecCceE
Q psy14906 358 LPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIG-YSSGHV 436 (583)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i 436 (583)
... ........++++|++++++++ ..++.+
T Consensus 201 ------------------------------------------------~~~-~~~~~~~~i~~s~dg~~~~~~~~~~~~i 231 (300)
T TIGR03866 201 ------------------------------------------------GVH-PEAVQPVGIKLTKDGKTAFVALGPANRV 231 (300)
T ss_pred ------------------------------------------------ccc-cccCCccceEECCCCCEEEEEcCCCCeE
Confidence 000 000234568899999986554 456789
Q ss_pred EEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEe-ecCCcEEEEEccCCCCCceEEeeccCCeeeEEecc
Q psy14906 437 DRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISG-GNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ 512 (583)
Q Consensus 437 ~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~ 512 (583)
.+||+.+++....+ .+...+.+++|+|++++|+++ +.++.|++||+.+. +++..++.......++++|
T Consensus 232 ~v~d~~~~~~~~~~------~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~--~~~~~~~~~~~~~~~~~~~ 300 (300)
T TIGR03866 232 AVVDAKTYEVLDYL------LVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAAL--KVIKSIKVGRLPWGVVVRP 300 (300)
T ss_pred EEEECCCCcEEEEE------EeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCC--cEEEEEEcccccceeEeCC
Confidence 99999988776554 234578999999999998876 56899999999998 8888888888888888875
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-27 Score=216.49 Aligned_cols=293 Identities=13% Similarity=0.102 Sum_probs=217.9
Q ss_pred CCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEE
Q psy14906 174 VDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTG 253 (583)
Q Consensus 174 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~ 253 (583)
++.+++++.|+.+++||+.+++.+..+..+ ..+.+++|+|+++.++++++.++.|++||..+++....+ ..+. .+..
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~-~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~-~~~~-~~~~ 77 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVG-QRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTL-PSGP-DPEL 77 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECC-CCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEec-cCCC-CccE
Confidence 357888999999999999999998888876 457889999999844567788999999999998877766 3333 3567
Q ss_pred EEEecCCCEEEEE-eCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC-cEEEEEccccccce
Q psy14906 254 AHFLYNEPLLVTS-SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS-TLRIFNTKSETSNK 331 (583)
Q Consensus 254 ~~~~~~~~~l~s~-~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~ 331 (583)
++|+|+++.++++ +.++.+++||+. ..+.+..+.. ...+.+++|+| +++.++++..++ .+.+||..+++...
T Consensus 78 ~~~~~~g~~l~~~~~~~~~l~~~d~~----~~~~~~~~~~-~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~d~~~~~~~~ 151 (300)
T TIGR03866 78 FALHPNGKILYIANEDDNLVTVIDIE----TRKVLAEIPV-GVEPEGMAVSP-DGKIVVNTSETTNMAHFIDTKTYEIVD 151 (300)
T ss_pred EEECCCCCEEEEEcCCCCeEEEEECC----CCeEEeEeeC-CCCcceEEECC-CCCEEEEEecCCCeEEEEeCCCCeEEE
Confidence 8999999977654 568999999765 2344444442 23468899997 888998888765 46677876543322
Q ss_pred eeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccC
Q psy14906 332 NLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAK 411 (583)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 411 (583)
.+..
T Consensus 152 ~~~~---------------------------------------------------------------------------- 155 (300)
T TIGR03866 152 NVLV---------------------------------------------------------------------------- 155 (300)
T ss_pred EEEc----------------------------------------------------------------------------
Confidence 1100
Q ss_pred CCCceEEEEccCCcEEEEEe-cCceEEEEEcccCccccccCCCCCCCc--ccCeeEEEEeCCCcEEEE-eecCCcEEEEE
Q psy14906 412 QSKPTCVYITHCGNFVLIGY-SSGHVDRFNIQSGAHRGSYGHDNQPGH--VGGVRGVVSDNLNQIVIS-GGNDQTVKVWH 487 (583)
Q Consensus 412 ~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s-~~~dg~i~iwd 487 (583)
...+..++|+|+++++++++ .++.|++||+.+++....+.......+ ......++|+|++++++. .+.++.+.+||
T Consensus 156 ~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d 235 (300)
T TIGR03866 156 DQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVD 235 (300)
T ss_pred CCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEE
Confidence 02356789999999886554 589999999999877665421100111 123456889999997544 45567899999
Q ss_pred ccCCCCCceEEeeccCCeeeEEeccCCcEEEEE-eCCceEEEEEccccceEEeecccccceeeEEecC
Q psy14906 488 FKQTGKPPLRSIKLDNGISFFRTHQESSMLAVC-LDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSP 554 (583)
Q Consensus 488 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~ 554 (583)
..+. +....+.....+.+++|+|+|++|+++ ..++.|.+||+++++++..++.. ...+.++|+|
T Consensus 236 ~~~~--~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~ 300 (300)
T TIGR03866 236 AKTY--EVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG-RLPWGVVVRP 300 (300)
T ss_pred CCCC--cEEEEEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc-cccceeEeCC
Confidence 9877 666666666789999999999999886 46899999999999999988754 5568888875
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-28 Score=197.32 Aligned_cols=300 Identities=15% Similarity=0.218 Sum_probs=236.6
Q ss_pred cCCcceEEEeeCC-CCCEEEEEecCCeEEEEEccCCc----------eeE-----EEeccCCCeEEEEEecCCCCEEEEE
Q psy14906 160 RWNSCVNVLEPSP-VVDIIGVGLSNKKIILHNILTDE----------SLM-----EFIQTWGPVTALSFRTDGPPMMVSG 223 (583)
Q Consensus 160 ~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~----------~~~-----~~~~~~~~v~~~~~~~~~~~~l~s~ 223 (583)
.|.+.|+++...+ .|+++++|+.||.|.+||++.-. .+. .-.+|+-.|..+.|-|-..-++.++
T Consensus 41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss 120 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS 120 (397)
T ss_pred cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence 7889999999987 68999999999999999997532 111 1136778899999999776689999
Q ss_pred cCCCcEEEEeCCCCeehhhhhhccccceEEEEEecC---CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeE
Q psy14906 224 SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN---EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI 300 (583)
Q Consensus 224 ~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~ 300 (583)
+.|.+++|||.++.+....+ ..++.|.+-+++|- ..++|+|..+-.|++.|+. .+....++.+|.+.|.++
T Consensus 121 SFDhtlKVWDtnTlQ~a~~F--~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~----SGs~sH~LsGHr~~vlaV 194 (397)
T KOG4283|consen 121 SFDHTLKVWDTNTLQEAVDF--KMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIA----SGSFSHTLSGHRDGVLAV 194 (397)
T ss_pred cccceEEEeecccceeeEEe--ecCceeehhhcChhhhcceEEEEecCCCcEEEEecc----CCcceeeeccccCceEEE
Confidence 99999999999998877777 35778888888874 3478888889999999775 678889999999999999
Q ss_pred EEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEE
Q psy14906 301 QFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAI 380 (583)
Q Consensus 301 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (583)
.|+|...-.|++|+.||.|++||++..
T Consensus 195 ~Wsp~~e~vLatgsaDg~irlWDiRra----------------------------------------------------- 221 (397)
T KOG4283|consen 195 EWSPSSEWVLATGSADGAIRLWDIRRA----------------------------------------------------- 221 (397)
T ss_pred EeccCceeEEEecCCCceEEEEEeecc-----------------------------------------------------
Confidence 999977778899999999999998753
Q ss_pred ecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCccc
Q psy14906 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVG 460 (583)
Q Consensus 381 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~ 460 (583)
.|..++.|...++....+... ..|.+
T Consensus 222 ----------------------------------------------------sgcf~~lD~hn~k~~p~~~~n--~ah~g 247 (397)
T KOG4283|consen 222 ----------------------------------------------------SGCFRVLDQHNTKRPPILKTN--TAHYG 247 (397)
T ss_pred ----------------------------------------------------cceeEEeecccCccCcccccc--ccccc
Confidence 122344444433333332211 68999
Q ss_pred CeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEe--ecc----CCeeeEEeccCCcEEEEEeCCceEEEEEcccc
Q psy14906 461 GVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI--KLD----NGISFFRTHQESSMLAVCLDDFTVNIIDIDTC 534 (583)
Q Consensus 461 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~----~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 534 (583)
.+..++|+.++.++++++.|..+++|+..++...+...- .+. -.+. +. +.+...++---.++.+.++++-++
T Consensus 248 kvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~-~~-~~~s~vfv~~p~~~~lall~~~sg 325 (397)
T KOG4283|consen 248 KVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVH-IQ-SMDSDVFVLFPNDGSLALLNLLEG 325 (397)
T ss_pred eeeeeeecccchhhhhccCccceEEeecccCcccccccccccccccccceEE-Ee-ecccceEEEEecCCeEEEEEccCc
Confidence 999999999999999999999999999988742222111 111 1122 22 334445555556689999999999
Q ss_pred ceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 535 TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 535 ~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
..+..+.+|-..|.+.++.|+=+.+.++..|+.|..|-..
T Consensus 326 s~ir~l~~h~k~i~c~~~~~~fq~~~tg~~d~ni~~w~p~ 365 (397)
T KOG4283|consen 326 SFVRRLSTHLKRINCAAYRPDFEQCFTGDMNGNIYMWSPA 365 (397)
T ss_pred eEEEeeecccceeeEEeecCchhhhhccccCCcccccccc
Confidence 9999999999999999999999999999999999999763
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-28 Score=198.42 Aligned_cols=270 Identities=14% Similarity=0.262 Sum_probs=212.8
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
.....|..+.|+|.++.|++++.||++++|++...+....+. |..++.+++|.++.. +++|+.||.|+.+|+++++.
T Consensus 11 pP~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d~~~--~~~G~~dg~vr~~Dln~~~~ 87 (323)
T KOG1036|consen 11 PPEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFADEST--IVTGGLDGQVRRYDLNTGNE 87 (323)
T ss_pred CChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccCCce--EEEeccCceEEEEEecCCcc
Confidence 346789999999999999999999999999999886666665 448999999999764 99999999999999998765
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
... ..|..+|.++.+++....+++|+.|++|++||... ......+. ....|.++.. .++.|+.|+.|..+
T Consensus 88 ~~i--gth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~----~~~~~~~d-~~kkVy~~~v---~g~~LvVg~~~r~v 157 (323)
T KOG1036|consen 88 DQI--GTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRN----KVVVGTFD-QGKKVYCMDV---SGNRLVVGTSDRKV 157 (323)
T ss_pred eee--ccCCCceEEEEeeccCCeEEEcccCccEEEEeccc----cccccccc-cCceEEEEec---cCCEEEEeecCceE
Confidence 544 47999999999999989999999999999996532 12222222 2336777766 47799999999999
Q ss_pred EEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 320 RIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 320 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
.+||+++........
T Consensus 158 ~iyDLRn~~~~~q~r----------------------------------------------------------------- 172 (323)
T KOG1036|consen 158 LIYDLRNLDEPFQRR----------------------------------------------------------------- 172 (323)
T ss_pred EEEEcccccchhhhc-----------------------------------------------------------------
Confidence 999998754321100
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCc----cccccCCCCCCCc---------ccCeeEEE
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGA----HRGSYGHDNQPGH---------VGGVRGVV 466 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~h---------~~~v~~~~ 466 (583)
...-..++.|+++-|++.-.++++-+|.|.+=.+...+ ....| +.| --+|++++
T Consensus 173 --------eS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaF-----kCHr~~~~~~~~~yPVNai~ 239 (323)
T KOG1036|consen 173 --------ESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAF-----KCHRLSEKDTEIIYPVNAIA 239 (323)
T ss_pred --------cccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeE-----EeeecccCCceEEEEeceeE
Confidence 00001568899999999999999999999886665442 12222 333 24799999
Q ss_pred EeCCCcEEEEeecCCcEEEEEccCCCCCceEEeec-cCCeeeEEeccCCcEEEEEeC
Q psy14906 467 SDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL-DNGISFFRTHQESSMLAVCLD 522 (583)
Q Consensus 467 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~ 522 (583)
|+|-...||||+.||.|.+||+.+. +.+..+.. ...|.+++|+.+|..||+++.
T Consensus 240 Fhp~~~tfaTgGsDG~V~~Wd~~~r--Krl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 240 FHPIHGTFATGGSDGIVNIWDLFNR--KRLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred eccccceEEecCCCceEEEccCcch--hhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence 9999999999999999999999987 66665544 467999999999999999875
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=215.33 Aligned_cols=280 Identities=12% Similarity=0.200 Sum_probs=235.8
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCC---ceeEEEe--ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD---ESLMEFI--QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL 234 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~---~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 234 (583)
.|..-|.++.+|...+++.+|+. |.|+|||+... .++..+. ....-+.++...|||+ -|++|+.-.++.|||+
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgr-tLivGGeastlsiWDL 494 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGR-TLIVGGEASTLSIWDL 494 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCc-eEEeccccceeeeeec
Confidence 78889999999999999999866 67999999643 2333333 2346789999999999 7899999999999999
Q ss_pred CCCeeh--hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEE
Q psy14906 235 EDRQVE--NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILS 312 (583)
Q Consensus 235 ~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 312 (583)
....+. ..+ ....-...+++.+||.+..+++..||.|.|||+. +...++.+++|.+.+.|+..++ ||..|.+
T Consensus 495 AapTprikael-tssapaCyALa~spDakvcFsccsdGnI~vwDLh----nq~~VrqfqGhtDGascIdis~-dGtklWT 568 (705)
T KOG0639|consen 495 AAPTPRIKAEL-TSSAPACYALAISPDAKVCFSCCSDGNIAVWDLH----NQTLVRQFQGHTDGASCIDISK-DGTKLWT 568 (705)
T ss_pred cCCCcchhhhc-CCcchhhhhhhcCCccceeeeeccCCcEEEEEcc----cceeeecccCCCCCceeEEecC-CCceeec
Confidence 865443 233 2233456788999999999999999999999886 6678899999999999999996 8999999
Q ss_pred eeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeec
Q psy14906 313 AAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSF 392 (583)
Q Consensus 313 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 392 (583)
|+-|.+++.||++++.........
T Consensus 569 GGlDntvRcWDlregrqlqqhdF~-------------------------------------------------------- 592 (705)
T KOG0639|consen 569 GGLDNTVRCWDLREGRQLQQHDFS-------------------------------------------------------- 592 (705)
T ss_pred CCCccceeehhhhhhhhhhhhhhh--------------------------------------------------------
Confidence 999999999999988765432111
Q ss_pred CcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc
Q psy14906 393 YKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472 (583)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 472 (583)
.+|.++..+|.+.++++|-.++.+.+......+.. .+ .-|..-|.++.|.+.|+
T Consensus 593 --------------------SQIfSLg~cP~~dWlavGMens~vevlh~skp~ky-ql-----hlheScVLSlKFa~cGk 646 (705)
T KOG0639|consen 593 --------------------SQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKY-QL-----HLHESCVLSLKFAYCGK 646 (705)
T ss_pred --------------------hhheecccCCCccceeeecccCcEEEEecCCccce-ee-----cccccEEEEEEecccCc
Confidence 57899999999999999999999999887654433 33 57999999999999999
Q ss_pred EEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEc
Q psy14906 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531 (583)
Q Consensus 473 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 531 (583)
++++.+.|..+..|...-+ ..+...+..+.|.++.+|.|.+++++|+.|....+|.+
T Consensus 647 wfvStGkDnlLnawrtPyG--asiFqskE~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 647 WFVSTGKDNLLNAWRTPYG--ASIFQSKESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred eeeecCchhhhhhccCccc--cceeeccccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 9999999999999999888 77888888899999999999999999999988888864
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=226.67 Aligned_cols=249 Identities=17% Similarity=0.213 Sum_probs=192.7
Q ss_pred EcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecC-CCEEEEEeCCCeEEEEEccCCCCC----ceeeEEeccCCCCC
Q psy14906 223 GSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN-EPLLVTSSPDNTLKLWIFDKADGN----GRLLRIREGHSAPP 297 (583)
Q Consensus 223 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~~w~~~~~~~~----~~~~~~~~~~~~~v 297 (583)
|+.++.+++|+......+..+ .+|.+.|.+++|+|+ +++|++|+.|+.|++|++...... ...+..+.+|...|
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L-~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V 128 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKL-KGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKI 128 (568)
T ss_pred CCceeEEEeeecCCCceEEEE-cCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcE
Confidence 566788999998877777777 799999999999997 789999999999999987532110 12345678999999
Q ss_pred eeEEEeeCCCC-EEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccccccccc
Q psy14906 298 NYIQFYGNSSD-NILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNN 376 (583)
Q Consensus 298 ~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (583)
.+++|+| ++. .|++++.|++|++||+++++....+.
T Consensus 129 ~sVaf~P-~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~------------------------------------------ 165 (568)
T PTZ00420 129 SIIDWNP-MNYYIMCSSGFDSFVNIWDIENEKRAFQIN------------------------------------------ 165 (568)
T ss_pred EEEEECC-CCCeEEEEEeCCCeEEEEECCCCcEEEEEe------------------------------------------
Confidence 9999998 455 56789999999999998765332210
Q ss_pred EEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCC
Q psy14906 377 IAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQP 456 (583)
Q Consensus 377 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 456 (583)
+...+.+++|+|+|++|++++.|+.|++||+++++.+..+ .
T Consensus 166 ----------------------------------~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl-----~ 206 (568)
T PTZ00420 166 ----------------------------------MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSF-----H 206 (568)
T ss_pred ----------------------------------cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEE-----e
Confidence 0145899999999999999999999999999999988877 6
Q ss_pred CcccCeeEE-----EEeCCCcEEEEeecCC----cEEEEEccCCCCCceEEeeccCCee---eEEeccCCcEEEEEeCCc
Q psy14906 457 GHVGGVRGV-----VSDNLNQIVISGGNDQ----TVKVWHFKQTGKPPLRSIKLDNGIS---FFRTHQESSMLAVCLDDF 524 (583)
Q Consensus 457 ~h~~~v~~~-----~~s~~~~~l~s~~~dg----~i~iwd~~~~~~~~~~~~~~~~~v~---~~~~s~~~~~l~~~~~dg 524 (583)
+|.+.+.+. .|++++.+|++++.|+ .|+|||++... .++....++.... .....++|.++++|..|+
T Consensus 207 gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~-~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~ 285 (568)
T PTZ00420 207 IHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTT-SALVTMSIDNASAPLIPHYDESTGLIYLIGKGDG 285 (568)
T ss_pred cccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCC-CceEEEEecCCccceEEeeeCCCCCEEEEEECCC
Confidence 888765433 3458889999988774 79999999642 5666655554333 333455688999999999
Q ss_pred eEEEEEccccceE--EeecccccceeeEEecCCC
Q psy14906 525 TVNIIDIDTCTII--RKLSGHMGQLTDADFSPDS 556 (583)
Q Consensus 525 ~i~i~d~~~~~~~--~~~~~h~~~v~~l~~s~d~ 556 (583)
.|++|++..+... ..+. +..++.+++|.|+.
T Consensus 286 tIr~~e~~~~~~~~l~~~~-s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 286 NCRYYQHSLGSIRKVNEYK-SCSPFRSFGFLPKQ 318 (568)
T ss_pred eEEEEEccCCcEEeecccc-cCCCccceEEcccc
Confidence 9999999876432 2222 56788999999964
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=194.72 Aligned_cols=252 Identities=17% Similarity=0.205 Sum_probs=202.4
Q ss_pred eecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCc---EEEEeeccCCceEEecccCCcceEEEeeCC--CCCEEE
Q psy14906 106 TYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEE---TYLELSFDNDTFKIMGKRWNSCVNVLEPSP--VVDIIG 178 (583)
Q Consensus 106 ~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~ 178 (583)
....|++-|... ...|++||+++.|++|+|+..++.. .+.++. +|.++|..++|.. -|.+||
T Consensus 6 idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~-----------Gh~GPVwqv~wahPk~G~iLA 74 (299)
T KOG1332|consen 6 IDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELT-----------GHSGPVWKVAWAHPKFGTILA 74 (299)
T ss_pred hhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEec-----------CCCCCeeEEeecccccCcEee
Confidence 345788888875 7789999999999999999998754 556666 9999999999976 799999
Q ss_pred EEecCCeEEEEEccCCc--eeEEEeccCCCeEEEEEecCCC-CEEEEEcCCCcEEEEeCCCC--eehhhhhhccccceEE
Q psy14906 179 VGLSNKKIILHNILTDE--SLMEFIQTWGPVTALSFRTDGP-PMMVSGSNTGHLTVWNLEDR--QVENQIKKAHRKVVTG 253 (583)
Q Consensus 179 ~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~~v~~ 253 (583)
+++.||.|.||.-+.++ ....+..|...|++++|.|.+- .+|++++.||.|.|.+.++. -....+...|.-.|++
T Consensus 75 ScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~Gvns 154 (299)
T KOG1332|consen 75 SCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNS 154 (299)
T ss_pred EeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccce
Confidence 99999999999988773 3455668999999999999742 27899999999999988754 3334444789999999
Q ss_pred EEEecC---C-----------CEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCC---CEEEEeeCC
Q psy14906 254 AHFLYN---E-----------PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSS---DNILSAAGD 316 (583)
Q Consensus 254 ~~~~~~---~-----------~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~l~~~~~d 316 (583)
++|.|. | +.|++|+.|..|+||+.+.. ....-+++.+|.+.|+.++|.|..+ ..|++++.|
T Consensus 155 Vswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~--~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqD 232 (299)
T KOG1332|consen 155 VSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSD--SWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQD 232 (299)
T ss_pred eeecCcCCCccccccCcccccceeeccCCccceeeeecCCc--chhhhhhhhhcchhhhhhhhccccCCCceeeEEecCC
Confidence 999986 4 56999999999999976643 5566677999999999999998543 689999999
Q ss_pred CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccc
Q psy14906 317 STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSK 396 (583)
Q Consensus 317 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 396 (583)
|++.||........-..
T Consensus 233 g~viIwt~~~e~e~wk~--------------------------------------------------------------- 249 (299)
T KOG1332|consen 233 GTVIIWTKDEEYEPWKK--------------------------------------------------------------- 249 (299)
T ss_pred CcEEEEEecCccCcccc---------------------------------------------------------------
Confidence 99999987632110000
Q ss_pred ccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcc
Q psy14906 397 MDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQ 442 (583)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~ 442 (583)
.....-...+..+.||..|+.|++++.|+.|.+|.-.
T Consensus 250 ---------tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 250 ---------TLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred ---------cccccCCcceEEEEEeccccEEEEecCCcEEEEEEeC
Confidence 0000011468899999999999999999999999754
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-28 Score=208.79 Aligned_cols=252 Identities=20% Similarity=0.353 Sum_probs=204.8
Q ss_pred ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee----------hhhhhhccccceEEEEEecCCC-EEEEEeCCC
Q psy14906 202 QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV----------ENQIKKAHRKVVTGAHFLYNEP-LLVTSSPDN 270 (583)
Q Consensus 202 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~----------~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~ 270 (583)
.|.+.|+.+.+-|..+.++++.+..+.+.|||..+..- -..+ .+|.+.-.+++|++... .|++++.|+
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L-~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRL-KGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEE-EeecccccccccccccceeEeeccCCC
Confidence 67799999999999998999999999999999865321 1144 68988788899998643 789999999
Q ss_pred eEEEEEccCCCCC---ceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhc
Q psy14906 271 TLKLWIFDKADGN---GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKN 347 (583)
Q Consensus 271 ~i~~w~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 347 (583)
.|++||+...... ......+.+|...|..++|++.....+.+++.|+.+.+||++++ ..+
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~~~---------------- 263 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-TSK---------------- 263 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-CCC----------------
Confidence 9999998765432 34556788999999999999988889999999999999998753 100
Q ss_pred chhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEE
Q psy14906 348 RLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFV 427 (583)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 427 (583)
T Consensus 264 -------------------------------------------------------------------------------- 263 (422)
T KOG0264|consen 264 -------------------------------------------------------------------------------- 263 (422)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCC-CcEEEEeecCCcEEEEEccCCCCCceEEeeccCCee
Q psy14906 428 LIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNL-NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506 (583)
Q Consensus 428 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 506 (583)
..... .+|.+.|.|++|+|- +..||+|+.|++|++||+++...++.....|...|.
T Consensus 264 ------------------~~~~~-----~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~ 320 (422)
T KOG0264|consen 264 ------------------PSHSV-----KAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVF 320 (422)
T ss_pred ------------------Ccccc-----cccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceE
Confidence 00011 689999999999994 568899999999999999988643334445567999
Q ss_pred eEEeccCCc-EEEEEeCCceEEEEEcccc--------------ceEEeecccccceeeEEecCCCcE-EEEEeCCCeEEE
Q psy14906 507 FFRTHQESS-MLAVCLDDFTVNIIDIDTC--------------TIIRKLSGHMGQLTDADFSPDSRW-LITASMDCTIRV 570 (583)
Q Consensus 507 ~~~~s~~~~-~l~~~~~dg~i~i~d~~~~--------------~~~~~~~~h~~~v~~l~~s~d~~~-l~s~~~d~~i~v 570 (583)
++.|||... .||+++.|+.+.+||+..- +++....||...|..+.|+|+..+ |+|+++|+.+.|
T Consensus 321 ~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqI 400 (422)
T KOG0264|consen 321 QVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQI 400 (422)
T ss_pred EEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEE
Confidence 999999765 8899999999999998531 345677799999999999998876 678999999999
Q ss_pred EeCC
Q psy14906 571 WDIP 574 (583)
Q Consensus 571 w~~~ 574 (583)
|.+.
T Consensus 401 W~~s 404 (422)
T KOG0264|consen 401 WQMA 404 (422)
T ss_pred eecc
Confidence 9986
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-25 Score=207.90 Aligned_cols=471 Identities=16% Similarity=0.182 Sum_probs=309.7
Q ss_pred cCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeC------eEEEEEcCCeEEEEec-cce
Q psy14906 30 NHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDF------FHIYTSANNIIYAWRR-GID 102 (583)
Q Consensus 30 ~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~------~~~~~~~~~~i~vw~~-~~~ 102 (583)
+.....-.|++|.+. ++.+.++.|.||...++.++..+.+|..+++.+.+++ .+++++.+|.|++||- ++.
T Consensus 16 n~~~~~avfSnD~k~--l~~~~~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~ 93 (792)
T KOG1963|consen 16 NGNKSPAVFSNDAKF--LFLCTGNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGE 93 (792)
T ss_pred cceecccccccCCcE--EEEeeCCEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcE
Confidence 444455568777665 6666899999999999999999999999999988743 3567889999999995 677
Q ss_pred eeeeecccCccEEEE-cc---CCCEEEEEe-CCCc-EEEEEcCCCcEEEEeecc-----CCceEEecccCCcceEEEeeC
Q psy14906 103 IVGTYKGHTSPVHLI-LP---FGPHLISVD-EESN-VKVWDIKAEETYLELSFD-----NDTFKIMGKRWNSCVNVLEPS 171 (583)
Q Consensus 103 ~~~~~~~h~~~v~~i-s~---~~~~l~s~~-~dg~-i~iwd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~~~s 171 (583)
+++++..+......+ .| +...++..+ .|.. +.....+.......+... ...+. ..+.. -.++.++
T Consensus 94 Llkt~~~~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~---~~~~~-~~~I~~~ 169 (792)
T KOG1963|consen 94 LLKTFDNNLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFL---KEHQE-PKSIVDN 169 (792)
T ss_pred EEEEEecCCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhh---hhhcC-CccEEEc
Confidence 888777554433332 11 111222111 1211 111112222211111100 00000 12222 4678888
Q ss_pred CCCCEEEEEecCCeEEEEEccCCceeEE----EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC---Ceehhhhh
Q psy14906 172 PVVDIIGVGLSNKKIILHNILTDESLME----FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED---RQVENQIK 244 (583)
Q Consensus 172 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~---~~~~~~~~ 244 (583)
+.|........ ..+.+|+..+...... -..|...+++.+++|+++ ++++|..||.|.+|.--. .+...++.
T Consensus 170 ~~ge~~~i~~~-~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~-~~Aa~d~dGrI~vw~d~~~~~~~~t~t~l 247 (792)
T KOG1963|consen 170 NSGEFKGIVHM-CKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNER-YLAAGDSDGRILVWRDFGSSDDSETCTLL 247 (792)
T ss_pred CCceEEEEEEe-eeEEEEEecccceeeccchhhhhhcccceeEEeccccc-eEEEeccCCcEEEEeccccccccccceEE
Confidence 88887776655 4689999876541111 125666789999999999 899999999999996432 22233332
Q ss_pred hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEc
Q psy14906 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324 (583)
Q Consensus 245 ~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 324 (583)
.=|...|++++|+++|.+|++||.++.+.+|.+... ..+ .+..-.++|..+.++| |+...+....|..|.+...
T Consensus 248 HWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~--~kq---fLPRLgs~I~~i~vS~-ds~~~sl~~~DNqI~li~~ 321 (792)
T KOG1963|consen 248 HWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETG--KKQ---FLPRLGSPILHIVVSP-DSDLYSLVLEDNQIHLIKA 321 (792)
T ss_pred EecccccceeEEecCCceEeecccceEEEEEeecCC--Ccc---cccccCCeeEEEEEcC-CCCeEEEEecCceEEEEec
Confidence 568889999999999999999999999999966532 333 3444567999999997 8889998999999999887
Q ss_pred cccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeec
Q psy14906 325 KSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVP 404 (583)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 404 (583)
.+......+..... ..
T Consensus 322 ~dl~~k~tIsgi~~----------------------------------------------------------------~~ 337 (792)
T KOG1963|consen 322 SDLEIKSTISGIKP----------------------------------------------------------------PT 337 (792)
T ss_pred cchhhhhhccCccC----------------------------------------------------------------CC
Confidence 65443332211000 00
Q ss_pred ccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCC------CcccCeeEEEEeCCCcEEEEee
Q psy14906 405 ERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQP------GHVGGVRGVVSDNLNQIVISGG 478 (583)
Q Consensus 405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------~h~~~v~~~~~s~~~~~l~s~~ 478 (583)
...+...+.-.+.++++|.-+.++..+..|.|++||+.+...+..+...... .+.-.+++++.+..|.+++|.-
T Consensus 338 ~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E 417 (792)
T KOG1963|consen 338 PSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLE 417 (792)
T ss_pred ccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEee
Confidence 0001111245678889998788888899999999999988777655322111 3344678888888899999874
Q ss_pred c--------CC--cEEEEEccCCCCCc--eEEe--eccCCeeeEEec-cCCc-EEEEEeCCceEEEEEccccc-------
Q psy14906 479 N--------DQ--TVKVWHFKQTGKPP--LRSI--KLDNGISFFRTH-QESS-MLAVCLDDFTVNIIDIDTCT------- 535 (583)
Q Consensus 479 ~--------dg--~i~iwd~~~~~~~~--~~~~--~~~~~v~~~~~s-~~~~-~l~~~~~dg~i~i~d~~~~~------- 535 (583)
. || .+++|......+.- ...+ .|...+...++. +... .+++++.||.++||-+...+
T Consensus 418 ~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s 497 (792)
T KOG1963|consen 418 ARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSS 497 (792)
T ss_pred eeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCcc
Confidence 2 33 47889877652211 1222 233334444433 3333 89999999999999884322
Q ss_pred ---eEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCC-cccc
Q psy14906 536 ---IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS-SQLI 579 (583)
Q Consensus 536 ---~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~-~~~~ 579 (583)
+...-.-|..++++++|+.||..|+ ++.|++|.+||..+ .++.
T Consensus 498 ~W~c~~i~sy~k~~i~a~~fs~dGslla-~s~~~~Itiwd~~~~~~l~ 544 (792)
T KOG1963|consen 498 NWTCKAIGSYHKTPITALCFSQDGSLLA-VSFDDTITIWDYDTKNELL 544 (792)
T ss_pred ceEEeeeeccccCcccchhhcCCCcEEE-EecCCEEEEecCCChhhhh
Confidence 2222223789999999999997555 66788999999988 4443
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-26 Score=181.24 Aligned_cols=296 Identities=15% Similarity=0.198 Sum_probs=224.1
Q ss_pred CccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEE---EeeccCCceEE-ecccCCcceEEEeeCCCCCEEEEEecCC
Q psy14906 111 TSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYL---ELSFDNDTFKI-MGKRWNSCVNVLEPSPVVDIIGVGLSNK 184 (583)
Q Consensus 111 ~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~d~ 184 (583)
+..|.++ .|.|...|.|+...+++|--...-..+. +-...+..... -.+.|.+.|.|.+|+|+|++||+|+.|.
T Consensus 32 sqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsndk 111 (350)
T KOG0641|consen 32 SQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSNDK 111 (350)
T ss_pred hhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCCc
Confidence 3445554 8999999999888888876544311110 00000000000 0137889999999999999999999999
Q ss_pred eEEEEEccCCc-----eeEEEeccCCCeEEEEEecC---CCCEEEEEc-CCCcEEEEeCCCCeehhhhhhccccceEEEE
Q psy14906 185 KIILHNILTDE-----SLMEFIQTWGPVTALSFRTD---GPPMMVSGS-NTGHLTVWNLEDRQVENQIKKAHRKVVTGAH 255 (583)
Q Consensus 185 ~i~iw~~~~~~-----~~~~~~~~~~~v~~~~~~~~---~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 255 (583)
+|++....... .-.+|.-|.+.|..++|..+ +..+|++++ .|..|.+=|...|+....+ .+|++.|.++
T Consensus 112 ~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~-sghtghilal- 189 (350)
T KOG0641|consen 112 TIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHAL-SGHTGHILAL- 189 (350)
T ss_pred eEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceee-cCCcccEEEE-
Confidence 99997665332 22457788899999999765 223777765 3667888888889999998 8999999886
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEec----c---CCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccc
Q psy14906 256 FLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE----G---HSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328 (583)
Q Consensus 256 ~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~----~---~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 328 (583)
++-++-++++|+.|.+|++||+... .++.++. + ....|.+++..| .|++|++|-.|....+||++.++
T Consensus 190 yswn~~m~~sgsqdktirfwdlrv~----~~v~~l~~~~~~~glessavaav~vdp-sgrll~sg~~dssc~lydirg~r 264 (350)
T KOG0641|consen 190 YSWNGAMFASGSQDKTIRFWDLRVN----SCVNTLDNDFHDGGLESSAVAAVAVDP-SGRLLASGHADSSCMLYDIRGGR 264 (350)
T ss_pred EEecCcEEEccCCCceEEEEeeecc----ceeeeccCcccCCCcccceeEEEEECC-CcceeeeccCCCceEEEEeeCCc
Confidence 5668899999999999999988643 3333322 1 235788999998 89999999999999999999988
Q ss_pred cceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccccc
Q psy14906 329 SNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCK 408 (583)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 408 (583)
.++.+..
T Consensus 265 ~iq~f~p------------------------------------------------------------------------- 271 (350)
T KOG0641|consen 265 MIQRFHP------------------------------------------------------------------------- 271 (350)
T ss_pred eeeeeCC-------------------------------------------------------------------------
Confidence 8776522
Q ss_pred ccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEc
Q psy14906 409 QAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF 488 (583)
Q Consensus 409 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 488 (583)
|...|.|+.|+|...++++++.|..|++-|++ |.+...++......|...+..+.|+|..--+++.+.|.++.+|-+
T Consensus 272 --hsadir~vrfsp~a~yllt~syd~~ikltdlq-gdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 272 --HSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQ-GDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADKTATLWAL 348 (350)
T ss_pred --CccceeEEEeCCCceEEEEecccceEEEeecc-cchhhcCceEEEEeccCceEEEEecCccceeeeccCcceEEEecc
Confidence 12679999999999999999999999999987 334444433333689999999999999988999999999999976
Q ss_pred c
Q psy14906 489 K 489 (583)
Q Consensus 489 ~ 489 (583)
.
T Consensus 349 ~ 349 (350)
T KOG0641|consen 349 N 349 (350)
T ss_pred C
Confidence 4
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-26 Score=208.51 Aligned_cols=201 Identities=12% Similarity=0.147 Sum_probs=155.2
Q ss_pred ccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC-CcEEEEEecCceEEEEEcccCccccc
Q psy14906 371 EKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC-GNFVLIGYSSGHVDRFNIQSGAHRGS 449 (583)
Q Consensus 371 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~ 449 (583)
..-....++.+.+++.|++|.+......+....++.....|...|+++.|+|- ...|++++.|.+|++||+.+++....
T Consensus 636 dPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~ 715 (1012)
T KOG1445|consen 636 DPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSR 715 (1012)
T ss_pred CCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhhe
Confidence 34446788999999999999999999999999999999999999999999995 57899999999999999999999888
Q ss_pred cCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc--CCeeeEEeccCCcEEEEEeCC----
Q psy14906 450 YGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD--NGISFFRTHQESSMLAVCLDD---- 523 (583)
Q Consensus 450 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~d---- 523 (583)
+ .+|.+.|..++|||+|+.+|+.+.||+|++|+.++.. ++++.-... ..-..+.|.-||+++++.+.|
T Consensus 716 l-----~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e-~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~Se 789 (1012)
T KOG1445|consen 716 L-----VGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSRE-QPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSE 789 (1012)
T ss_pred e-----ccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCC-CccccCCCCccCcceeEEEEecCcEEEEecccccch
Confidence 8 8999999999999999999999999999999998764 333332222 234567888899988877655
Q ss_pred ceEEEEEccccc--eEEeeccccc-ceeeEEecCCCcE-EEEEeCCCeEEEEeCCCcc
Q psy14906 524 FTVNIIDIDTCT--IIRKLSGHMG-QLTDADFSPDSRW-LITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 524 g~i~i~d~~~~~--~~~~~~~h~~-~v~~l~~s~d~~~-l~s~~~d~~i~vw~~~~~~ 577 (583)
..|.+||.++.. .+.+..-... .+.--.+.+|... +++|-.|..|.+|.+-..+
T Consensus 790 RQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v~~yEv~~es 847 (1012)
T KOG1445|consen 790 RQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDRFVNMYEVIYES 847 (1012)
T ss_pred hhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCceEEEEEecCCC
Confidence 478888877543 2222111111 1111234455554 5678889999999886543
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-28 Score=212.60 Aligned_cols=277 Identities=14% Similarity=0.192 Sum_probs=227.2
Q ss_pred CCCCCeEEEEeeC--eEEEEEcCCeEEEEeccce----eeeeecc--cCccEEEE--ccCCCEEEEEeCCCcEEEEEcCC
Q psy14906 71 QHEDDITCLSSDF--FHIYTSANNIIYAWRRGID----IVGTYKG--HTSPVHLI--LPFGPHLISVDEESNVKVWDIKA 140 (583)
Q Consensus 71 ~h~~~v~~~~~~~--~~~~~~~~~~i~vw~~~~~----~~~~~~~--h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~ 140 (583)
.|.+-|.+++.++ +.+.++..|.|+|||+.+. .+..|.. ....|.+. .|||+.|++|+.-.++.|||+..
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGkgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAa 496 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGKGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAA 496 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCCCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccC
Confidence 4888888888744 7899999999999998543 3333332 24445543 99999999999999999999987
Q ss_pred CcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEE
Q psy14906 141 EETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMM 220 (583)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 220 (583)
.......++. ...-...+++.+||.+...++..||.|.|||+.+...++.|.+|.+.+.||..++||. .|
T Consensus 497 pTprikaelt---------ssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGt-kl 566 (705)
T KOG0639|consen 497 PTPRIKAELT---------SSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGT-KL 566 (705)
T ss_pred CCcchhhhcC---------CcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCc-ee
Confidence 6544333322 3345678899999999999999999999999999999999999999999999999998 89
Q ss_pred EEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeE
Q psy14906 221 VSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI 300 (583)
Q Consensus 221 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~ 300 (583)
-+|+-|.+||.||+++++.+.+. .....|.++.++|++.+++.|-.++.+.+... .+.....+..|..-|.++
T Consensus 567 WTGGlDntvRcWDlregrqlqqh--dF~SQIfSLg~cP~~dWlavGMens~vevlh~-----skp~kyqlhlheScVLSl 639 (705)
T KOG0639|consen 567 WTGGLDNTVRCWDLREGRQLQQH--DFSSQIFSLGYCPTGDWLAVGMENSNVEVLHT-----SKPEKYQLHLHESCVLSL 639 (705)
T ss_pred ecCCCccceeehhhhhhhhhhhh--hhhhhheecccCCCccceeeecccCcEEEEec-----CCccceeecccccEEEEE
Confidence 99999999999999998877766 46789999999999999999999998777743 233445566788999999
Q ss_pred EEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEE
Q psy14906 301 QFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAI 380 (583)
Q Consensus 301 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (583)
.|.+ .|+++++.+.|..+..|...-+..+....
T Consensus 640 KFa~-cGkwfvStGkDnlLnawrtPyGasiFqsk---------------------------------------------- 672 (705)
T KOG0639|consen 640 KFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQSK---------------------------------------------- 672 (705)
T ss_pred Eecc-cCceeeecCchhhhhhccCccccceeecc----------------------------------------------
Confidence 9997 89999999999999999987664332211
Q ss_pred ecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEc
Q psy14906 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNI 441 (583)
Q Consensus 381 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~ 441 (583)
....|.++.++.|.+++++|+.|..-.+|.+
T Consensus 673 ------------------------------E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 673 ------------------------------ESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred ------------------------------ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 1167999999999999999999988888865
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-27 Score=192.63 Aligned_cols=305 Identities=14% Similarity=0.222 Sum_probs=228.9
Q ss_pred eecccCccEEEE---ccCCCEEEEEeCCCcEEEEEcCCCcEEEE----eeccCCceEEecccCCcceEEEeeCC-CCCEE
Q psy14906 106 TYKGHTSPVHLI---LPFGPHLISVDEESNVKVWDIKAEETYLE----LSFDNDTFKIMGKRWNSCVNVLEPSP-VVDII 177 (583)
Q Consensus 106 ~~~~h~~~v~~i---s~~~~~l~s~~~dg~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l 177 (583)
..+.|.+.|+++ .-.|+|+++|+.||.|.+||+++...... .+...........+|.-.|..+.|-| |.-.+
T Consensus 38 ~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmF 117 (397)
T KOG4283|consen 38 FVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMF 117 (397)
T ss_pred eeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCcee
Confidence 345788999987 45689999999999999999987431100 00000000000137889999999998 56688
Q ss_pred EEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCC--CCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEE
Q psy14906 178 GVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDG--PPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAH 255 (583)
Q Consensus 178 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 255 (583)
.+++.|.++++||..+.+....|... +.|++-+++|-. ..++++|..+-.|++.|+.+|.+...+ .+|.+.|.++.
T Consensus 118 tssSFDhtlKVWDtnTlQ~a~~F~me-~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~L-sGHr~~vlaV~ 195 (397)
T KOG4283|consen 118 TSSSFDHTLKVWDTNTLQEAVDFKME-GKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTL-SGHRDGVLAVE 195 (397)
T ss_pred ecccccceEEEeecccceeeEEeecC-ceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeee-ccccCceEEEE
Confidence 89999999999999999999888877 889999999853 348899999999999999999999999 89999999999
Q ss_pred EecCCC-EEEEEeCCCeEEEEEccCCCCCc-----------eeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEE
Q psy14906 256 FLYNEP-LLVTSSPDNTLKLWIFDKADGNG-----------RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323 (583)
Q Consensus 256 ~~~~~~-~l~s~~~d~~i~~w~~~~~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd 323 (583)
|+|... .|++|+.||.+++||+....+.. ..+++-..|.+.|..++|.. ++.++++++.|..+++|+
T Consensus 196 Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tS-d~~~l~~~gtd~r~r~wn 274 (397)
T KOG4283|consen 196 WSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTS-DARYLASCGTDDRIRVWN 274 (397)
T ss_pred eccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecc-cchhhhhccCccceEEee
Confidence 999876 57899999999999886543221 22233456888999999996 899999999999999999
Q ss_pred cccccccee-eccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceee
Q psy14906 324 TKSETSNKN-LGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFL 402 (583)
Q Consensus 324 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 402 (583)
...++.... ++....+.
T Consensus 275 ~~~G~ntl~~~g~~~~n~-------------------------------------------------------------- 292 (397)
T KOG4283|consen 275 MESGRNTLREFGPIIHNQ-------------------------------------------------------------- 292 (397)
T ss_pred cccCcccccccccccccc--------------------------------------------------------------
Confidence 988754211 10000000
Q ss_pred ecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCc
Q psy14906 403 VPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT 482 (583)
Q Consensus 403 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~ 482 (583)
. . ..-..+. +-+...++.--.++.+.++++.++..+..+ ..|...|.|.++-|+-+...++..|+.
T Consensus 293 -----~-~--~~~~~~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l-----~~h~k~i~c~~~~~~fq~~~tg~~d~n 358 (397)
T KOG4283|consen 293 -----T-T--SFAVHIQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRL-----STHLKRINCAAYRPDFEQCFTGDMNGN 358 (397)
T ss_pred -----c-c--cceEEEe-ecccceEEEEecCCeEEEEEccCceEEEee-----ecccceeeEEeecCchhhhhccccCCc
Confidence 0 0 0000111 222223333334588999999999999888 789999999999999999999999999
Q ss_pred EEEEEcc
Q psy14906 483 VKVWHFK 489 (583)
Q Consensus 483 i~iwd~~ 489 (583)
+..|-..
T Consensus 359 i~~w~p~ 365 (397)
T KOG4283|consen 359 IYMWSPA 365 (397)
T ss_pred ccccccc
Confidence 9999873
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-27 Score=203.62 Aligned_cols=244 Identities=20% Similarity=0.279 Sum_probs=198.5
Q ss_pred CCCCCeEEEEe---eCeEEEE-EcCCeEEEEeccc-----------eeeeeecccCccEEEEcc---CCCEEEEEeCCCc
Q psy14906 71 QHEDDITCLSS---DFFHIYT-SANNIIYAWRRGI-----------DIVGTYKGHTSPVHLILP---FGPHLISVDEESN 132 (583)
Q Consensus 71 ~h~~~v~~~~~---~~~~~~~-~~~~~i~vw~~~~-----------~~~~~~~~h~~~v~~is~---~~~~l~s~~~dg~ 132 (583)
.|++.|..+.+ ++.+|++ +..+.|.|||... ..-.+|.||+..=..++. ..-+|++++.|++
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~ 201 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHT 201 (422)
T ss_pred cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCc
Confidence 37777776654 5556655 4678999999632 112278899886566633 3358999999999
Q ss_pred EEEEEcCCCcE-------EEEeeccCCceEEecccCCcceEEEeeCC-CCCEEEEEecCCeEEEEEcc--CCceeEEEec
Q psy14906 133 VKVWDIKAEET-------YLELSFDNDTFKIMGKRWNSCVNVLEPSP-VVDIIGVGLSNKKIILHNIL--TDESLMEFIQ 202 (583)
Q Consensus 133 i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~ 202 (583)
|++||+..... ...+. +|...|..++|++ +..++++++.|+.+.|||.+ +.++.....+
T Consensus 202 i~lwdi~~~~~~~~~~~p~~~~~-----------~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~a 270 (422)
T KOG0264|consen 202 ICLWDINAESKEDKVVDPKTIFS-----------GHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKA 270 (422)
T ss_pred EEEEeccccccCCccccceEEee-----------cCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccc
Confidence 99999986432 12233 9999999999998 45688999999999999999 5667777889
Q ss_pred cCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC-eehhhhhhccccceEEEEEecCC-CEEEEEeCCCeEEEEEccCC
Q psy14906 203 TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR-QVENQIKKAHRKVVTGAHFLYNE-PLLVTSSPDNTLKLWIFDKA 280 (583)
Q Consensus 203 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~w~~~~~ 280 (583)
|.++|.|++|+|-+.++||+|+.|++|.+||+++. +++.++ .+|...|..+.|+|.. ..|++++.|+.+.+||+...
T Consensus 271 h~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~-e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~i 349 (422)
T KOG0264|consen 271 HSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTF-EGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRI 349 (422)
T ss_pred cCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceec-cCCCcceEEEEeCCCCCceeEecccCCcEEEEecccc
Confidence 99999999999998889999999999999999985 456677 8999999999999974 68999999999999988542
Q ss_pred ----------CCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccc
Q psy14906 281 ----------DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 281 ----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 326 (583)
.+...++..-.||...|..+.|+|...-.+++.+.|+.+.||.+..
T Consensus 350 g~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~ 405 (422)
T KOG0264|consen 350 GEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAE 405 (422)
T ss_pred ccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeeccc
Confidence 2234566777899999999999998888999999999999999864
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-26 Score=191.69 Aligned_cols=285 Identities=12% Similarity=0.236 Sum_probs=219.6
Q ss_pred eEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCcee
Q psy14906 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRL 286 (583)
Q Consensus 207 v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~ 286 (583)
..|+.|++.|. +||+|+.||.|.|||+.+...-+.+ .+|..+|++++||+||+.|++++.|..+.+||+. .+.+
T Consensus 26 a~~~~Fs~~G~-~lAvGc~nG~vvI~D~~T~~iar~l-saH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~----~gs~ 99 (405)
T KOG1273|consen 26 AECCQFSRWGD-YLAVGCANGRVVIYDFDTFRIARML-SAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLL----KGSP 99 (405)
T ss_pred cceEEeccCcc-eeeeeccCCcEEEEEccccchhhhh-hccccceeEEEecCCCCEeeeecCCceeEEEecc----CCCc
Confidence 78999999999 9999999999999999999887777 8999999999999999999999999999999775 3445
Q ss_pred eEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeee
Q psy14906 287 LRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSF 366 (583)
Q Consensus 287 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (583)
++.+. ...+|..+.|+|.+.+..++.-.+..-.+-++..+.. .+
T Consensus 100 l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h--~~--------------------------------- 143 (405)
T KOG1273|consen 100 LKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKH--SV--------------------------------- 143 (405)
T ss_pred eeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCce--ee---------------------------------
Confidence 55554 4679999999997666666554444444444433111 00
Q ss_pred ecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcc
Q psy14906 367 GLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446 (583)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 446 (583)
.....++ .......+..|.+.|+++++|+..|.+.+||..+-++
T Consensus 144 ------------Lp~d~d~------------------------dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~ 187 (405)
T KOG1273|consen 144 ------------LPKDDDG------------------------DLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLEC 187 (405)
T ss_pred ------------ccCCCcc------------------------ccccccccccccCCCCEEEEecCcceEEEEecchhee
Confidence 0000000 0002233446889999999999999999999999998
Q ss_pred ccccCCCCCCCc-ccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCC-----Cce--EEee---ccCCeeeEEeccCCc
Q psy14906 447 RGSYGHDNQPGH-VGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK-----PPL--RSIK---LDNGISFFRTHQESS 515 (583)
Q Consensus 447 ~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~-----~~~--~~~~---~~~~v~~~~~s~~~~ 515 (583)
+..+. .. ...|..+.++..|++|+.-+.|..|+.|+++.-.. ++. ..+. ....-.+++||.+|.
T Consensus 188 vas~r-----its~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dge 262 (405)
T KOG1273|consen 188 VASFR-----ITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCFSGDGE 262 (405)
T ss_pred eeeee-----echheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheeecCCcc
Confidence 88873 33 37899999999999999999999999999873210 111 1111 112456789999999
Q ss_pred EEEEEeC-CceEEEEEccccceEEeecccc-cceeeEEecCCCcEEEEEeCCCeEEEEeCCC
Q psy14906 516 MLAVCLD-DFTVNIIDIDTCTIIRKLSGHM-GQLTDADFSPDSRWLITASMDCTIRVWDIPS 575 (583)
Q Consensus 516 ~l~~~~~-dg~i~i~d~~~~~~~~~~~~h~-~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~ 575 (583)
|+++++. ...++||....|.+++.+.|.. ....++.|.|-...+++- ..|.+++|....
T Consensus 263 Yv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~~ 323 (405)
T KOG1273|consen 263 YVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVVQ 323 (405)
T ss_pred EEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEEeec
Confidence 9988775 4689999999999999999887 568889999999989888 678999998754
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=189.19 Aligned_cols=246 Identities=17% Similarity=0.239 Sum_probs=197.5
Q ss_pred cCCCCCCeEEEE--eeC-eEEEEEcCCeEEEEecc--c--eeeeeecccCccEEEE---cc-CCCEEEEEeCCCcEEEEE
Q psy14906 69 SPQHEDDITCLS--SDF-FHIYTSANNIIYAWRRG--I--DIVGTYKGHTSPVHLI---LP-FGPHLISVDEESNVKVWD 137 (583)
Q Consensus 69 ~~~h~~~v~~~~--~~~-~~~~~~~~~~i~vw~~~--~--~~~~~~~~h~~~v~~i---s~-~~~~l~s~~~dg~i~iwd 137 (583)
-..|++.|.... |.| ++++++.|++|+|+... + .++.+|.||++||+.+ +| .|..||+++.||.|.||.
T Consensus 7 dt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWk 86 (299)
T KOG1332|consen 7 DTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWK 86 (299)
T ss_pred hhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEe
Confidence 346888887655 445 78889999999999963 2 6788999999999997 44 689999999999999999
Q ss_pred cCCCcEEEEeeccCCceEEecccCCcceEEEeeCCC--CCEEEEEecCCeEEEEEccCC---ceeEEEeccCCCeEEEEE
Q psy14906 138 IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV--VDIIGVGLSNKKIILHNILTD---ESLMEFIQTWGPVTALSF 212 (583)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~~~~ 212 (583)
-++|+-.+...+. .|...|++++|.|. |-.||+++.||.|.|.+.++. ...+....|.-.|++++|
T Consensus 87 e~~g~w~k~~e~~---------~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVsw 157 (299)
T KOG1332|consen 87 EENGRWTKAYEHA---------AHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSW 157 (299)
T ss_pred cCCCchhhhhhhh---------hhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeee
Confidence 9988544333332 89999999999985 568999999999999988754 233345688889999999
Q ss_pred ecC---CC----------CEEEEEcCCCcEEEEeCCCCe--ehhhhhhccccceEEEEEecCC----CEEEEEeCCCeEE
Q psy14906 213 RTD---GP----------PMMVSGSNTGHLTVWNLEDRQ--VENQIKKAHRKVVTGAHFLYNE----PLLVTSSPDNTLK 273 (583)
Q Consensus 213 ~~~---~~----------~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~----~~l~s~~~d~~i~ 273 (583)
.|- |. +.|++|+.|..|+||+..+++ ..+.+ .+|.+.|+.++|.|.- .+|+++++||++.
T Consensus 158 apa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l-~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~vi 236 (299)
T KOG1332|consen 158 APASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTL-EGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVI 236 (299)
T ss_pred cCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhh-hhcchhhhhhhhccccCCCceeeEEecCCCcEE
Confidence 986 31 259999999999999998763 34446 8999999999999974 4799999999999
Q ss_pred EEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccc
Q psy14906 274 LWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 274 ~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 326 (583)
||..+.+. .......+......+..++|+. .|+.|+.++.|+.+.+|.-..
T Consensus 237 Iwt~~~e~-e~wk~tll~~f~~~~w~vSWS~-sGn~LaVs~GdNkvtlwke~~ 287 (299)
T KOG1332|consen 237 IWTKDEEY-EPWKKTLLEEFPDVVWRVSWSL-SGNILAVSGGDNKVTLWKENV 287 (299)
T ss_pred EEEecCcc-CcccccccccCCcceEEEEEec-cccEEEEecCCcEEEEEEeCC
Confidence 99766332 2233344555677899999997 899999999999999998654
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-27 Score=203.56 Aligned_cols=285 Identities=15% Similarity=0.278 Sum_probs=228.3
Q ss_pred CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC--eehhhhhhccccceEEEEEecCCC-EEEEEeCCCeEEEEEccCCC
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR--QVENQIKKAHRKVVTGAHFLYNEP-LLVTSSPDNTLKLWIFDKAD 281 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~w~~~~~~ 281 (583)
+.|+++.|+|..+ +|++++.|+++++|.+... ..++.+ .-...+|.+.+|.|+|. .+++++....+..||+...
T Consensus 214 ~~I~sv~FHp~~p-lllvaG~d~~lrifqvDGk~N~~lqS~-~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~a- 290 (514)
T KOG2055|consen 214 GGITSVQFHPTAP-LLLVAGLDGTLRIFQVDGKVNPKLQSI-HLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETA- 290 (514)
T ss_pred CCceEEEecCCCc-eEEEecCCCcEEEEEecCccChhheee-eeccCccceeeecCCCceEEEecccceEEEEeecccc-
Confidence 7999999999998 9999999999999988742 344444 33467999999999999 8999999999999977533
Q ss_pred CCceeeEEeccCC-CCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCc
Q psy14906 282 GNGRLLRIREGHS-APPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPP 360 (583)
Q Consensus 282 ~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (583)
....+..+.++. ..+.....+| ++++|+..+..|.|.+....+++.+..+...
T Consensus 291 -k~~k~~~~~g~e~~~~e~FeVSh-d~~fia~~G~~G~I~lLhakT~eli~s~Kie------------------------ 344 (514)
T KOG2055|consen 291 -KVTKLKPPYGVEEKSMERFEVSH-DSNFIAIAGNNGHIHLLHAKTKELITSFKIE------------------------ 344 (514)
T ss_pred -ccccccCCCCcccchhheeEecC-CCCeEEEcccCceEEeehhhhhhhhheeeec------------------------
Confidence 444455555554 3456677786 8999999999999999999888776655322
Q ss_pred cceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEE
Q psy14906 361 VSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFN 440 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d 440 (583)
+.+..++|+.|++.|++.+.+|.|++||
T Consensus 345 ----------------------------------------------------G~v~~~~fsSdsk~l~~~~~~GeV~v~n 372 (514)
T KOG2055|consen 345 ----------------------------------------------------GVVSDFTFSSDSKELLASGGTGEVYVWN 372 (514)
T ss_pred ----------------------------------------------------cEEeeEEEecCCcEEEEEcCCceEEEEe
Confidence 5689999999999999999999999999
Q ss_pred cccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC----CCCceEEe-eccCCeeeEEeccCCc
Q psy14906 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT----GKPPLRSI-KLDNGISFFRTHQESS 515 (583)
Q Consensus 441 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~-~~~~~v~~~~~s~~~~ 515 (583)
++...+++.+... -.-.-++++.++++.+||+|+..|.|.|||..+. ..+++..+ .....|+++.|+||++
T Consensus 373 l~~~~~~~rf~D~----G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~q 448 (514)
T KOG2055|consen 373 LRQNSCLHRFVDD----GSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQ 448 (514)
T ss_pred cCCcceEEEEeec----CccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchh
Confidence 9999888887321 1123356778899999999999999999996542 12333333 3456899999999999
Q ss_pred EEEEEeC--CceEEEEEccccceEEeeccc---ccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 516 MLAVCLD--DFTVNIIDIDTCTIIRKLSGH---MGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 516 ~l~~~~~--dg~i~i~d~~~~~~~~~~~~h---~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
+||.++. +..+++-.+.+......+... -+.|+|++|||.+.+||.|.++|.+.+|.+.
T Consensus 449 iLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 449 ILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred hhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 9998876 578999999887776666543 3569999999999999999999999999874
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-26 Score=202.23 Aligned_cols=285 Identities=12% Similarity=0.174 Sum_probs=227.8
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEcc--CCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNIL--TDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR 237 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 237 (583)
...++|+++.|+|...+|++++.|++++||.+. +...+..+.....+|.+.+|.|+|...+++++....++.||+.+.
T Consensus 211 ps~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~a 290 (514)
T KOG2055|consen 211 PSHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETA 290 (514)
T ss_pred cCcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccc
Confidence 345799999999999999999999999999885 345677777777899999999999878999999999999999987
Q ss_pred eehh--hhhhccc-cceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee
Q psy14906 238 QVEN--QIKKAHR-KVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 238 ~~~~--~~~~~~~-~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 314 (583)
+..+ .. .++. ..+.....+|++++|+..|..|.|.+. ... +...+..++ -.+.|..++|+. +++.|++++
T Consensus 291 k~~k~~~~-~g~e~~~~e~FeVShd~~fia~~G~~G~I~lL--hak--T~eli~s~K-ieG~v~~~~fsS-dsk~l~~~~ 363 (514)
T KOG2055|consen 291 KVTKLKPP-YGVEEKSMERFEVSHDSNFIAIAGNNGHIHLL--HAK--TKELITSFK-IEGVVSDFTFSS-DSKELLASG 363 (514)
T ss_pred ccccccCC-CCcccchhheeEecCCCCeEEEcccCceEEee--hhh--hhhhhheee-eccEEeeEEEec-CCcEEEEEc
Confidence 6433 23 3443 467778899999999999999999988 433 345555544 356789999996 899999999
Q ss_pred CCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCc
Q psy14906 315 GDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYK 394 (583)
Q Consensus 315 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 394 (583)
.+|.|.+||++...+...+... .
T Consensus 364 ~~GeV~v~nl~~~~~~~rf~D~---------------------------------------------------------G 386 (514)
T KOG2055|consen 364 GTGEVYVWNLRQNSCLHRFVDD---------------------------------------------------------G 386 (514)
T ss_pred CCceEEEEecCCcceEEEEeec---------------------------------------------------------C
Confidence 9999999999987665543111 0
Q ss_pred ccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEccc------CccccccCCCCCCCcccCeeEEEEe
Q psy14906 395 SKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQS------GAHRGSYGHDNQPGHVGGVRGVVSD 468 (583)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~------~~~~~~~~~~~~~~h~~~v~~~~~s 468 (583)
.-.-+++|.++++.++|+|+..|.|-|||..+ .+++..+ ..-...|++++|+
T Consensus 387 -----------------~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~-----dNLtt~Itsl~Fn 444 (514)
T KOG2055|consen 387 -----------------SVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTV-----DNLTTAITSLQFN 444 (514)
T ss_pred -----------------ccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhh-----hhhheeeeeeeeC
Confidence 02357889999999999999999999999653 2334444 4567789999999
Q ss_pred CCCcEEEEee--cCCcEEEEEccCCCCCceEEeecc----CCeeeEEeccCCcEEEEEeCCceEEEEEcc
Q psy14906 469 NLNQIVISGG--NDQTVKVWHFKQTGKPPLRSIKLD----NGISFFRTHQESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 469 ~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 532 (583)
||.++||.++ .+..+++-.+.+. .....+... +.++|++|||.+.+||+|..+|.+.+|.+.
T Consensus 445 ~d~qiLAiaS~~~knalrLVHvPS~--TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 445 HDAQILAIASRVKKNALRLVHVPSC--TVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred cchhhhhhhhhccccceEEEeccce--eeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 9999998777 4567888888776 555554433 469999999999999999999999999874
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-25 Score=201.62 Aligned_cols=475 Identities=15% Similarity=0.177 Sum_probs=305.1
Q ss_pred cccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eC-eEEEEEcCCeEEEEeccceeeeeec
Q psy14906 32 LPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DF-FHIYTSANNIIYAWRRGIDIVGTYK 108 (583)
Q Consensus 32 ~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~-~~~~~~~~~~i~vw~~~~~~~~~~~ 108 (583)
-..-++|.|||.+++++ .|+.+.+||.+.|.++..+++|++.|.|+++ || ++++|+.|+.|.+|...-+-+. -.
T Consensus 14 ci~d~afkPDGsqL~lA--Ag~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~L-kY 90 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILA--AGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGIL-KY 90 (1081)
T ss_pred chheeEECCCCceEEEe--cCCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEeccccccee-ee
Confidence 44668899999996555 6999999999999999999999999999999 66 5777889999999996443222 23
Q ss_pred ccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeE
Q psy14906 109 GHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKI 186 (583)
Q Consensus 109 ~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i 186 (583)
.|.+.|.|+ .|-...|++++- ...-+|..+..... .. .....+.+++|..||++|+.|-.+|+|
T Consensus 91 SH~D~IQCMsFNP~~h~LasCsL-sdFglWS~~qK~V~-K~------------kss~R~~~CsWtnDGqylalG~~nGTI 156 (1081)
T KOG1538|consen 91 SHNDAIQCMSFNPITHQLASCSL-SDFGLWSPEQKSVS-KH------------KSSSRIICCSWTNDGQYLALGMFNGTI 156 (1081)
T ss_pred ccCCeeeEeecCchHHHhhhcch-hhccccChhhhhHH-hh------------hhheeEEEeeecCCCcEEEEeccCceE
Confidence 699999998 788899999864 45678987653322 11 335789999999999999999999999
Q ss_pred EEEEccCCceeEEEe---ccCCCeEEEEEecCCC----CEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecC
Q psy14906 187 ILHNILTDESLMEFI---QTWGPVTALSFRTDGP----PMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN 259 (583)
Q Consensus 187 ~iw~~~~~~~~~~~~---~~~~~v~~~~~~~~~~----~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 259 (583)
.+-+- ++++...+. +...+|.+++|+|... ..+++.....++..+.+. |+.+..- +.-.-...|+.+.++
T Consensus 157 siRNk-~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~-r~L~FdP~CisYf~N 233 (1081)
T KOG1538|consen 157 SIRNK-NGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKD-RALNFDPCCISYFTN 233 (1081)
T ss_pred EeecC-CCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeeccc-ccCCCCchhheeccC
Confidence 99875 455554444 4678999999999632 278888888889988886 5554433 233445678999999
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhh
Q psy14906 260 EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAN 339 (583)
Q Consensus 260 ~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 339 (583)
|.+++.|+.|+.+.+|.- .+..+.+.......|..++..| +++..+.|+.||+|..|++.....-.........
T Consensus 234 GEy~LiGGsdk~L~~fTR-----~GvrLGTvg~~D~WIWtV~~~P-NsQ~v~~GCqDGTiACyNl~fSTVH~ly~~RYA~ 307 (1081)
T KOG1538|consen 234 GEYILLGGSDKQLSLFTR-----DGVRLGTVGEQDSWIWTVQAKP-NSQYVVVGCQDGTIACYNLIFSTVHGLYKDRYAY 307 (1081)
T ss_pred CcEEEEccCCCceEEEee-----cCeEEeeccccceeEEEEEEcc-CCceEEEEEccCeeehhhhHHhHhhhhhHHhhhh
Confidence 999999999999999932 5677777777888999999998 8999999999999999998654321111000000
Q ss_pred hhhhhhhcchhccccccCCCccceeeee-cc-cccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceE
Q psy14906 340 RNNLKRKNRLEKMNEKFILPPVSQFSFG-LA-REKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTC 417 (583)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 417 (583)
+....... ...+.......+..- .. .-.-..+.++.. -..+|.+|.........+.......... ...+
T Consensus 308 R~sMtDVi-----vQhLi~~qkvrIkC~DLVkKiaiYrnrLAVQ-Lpeki~iYel~se~~~~mhY~v~ekI~k---kf~c 378 (1081)
T KOG1538|consen 308 RDSMTDVI-----VQHLITEQKVRIKCKDLVKKIAIYRNRLAVQ-LPEKILIYELYSEDLSDMHYRVKEKIIK---KFEC 378 (1081)
T ss_pred hhhhHHHH-----HHHHhhcceeeeeHHHHHHHHHhhhhhheec-ccceEEEEeccccccccchhHHHHHHHh---hccc
Confidence 00000000 000000000000000 00 000001111111 1235667766654443333222211111 1111
Q ss_pred EEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEE--eC-CCcEEEEeecCCcEEEEEccCCCCC
Q psy14906 418 VYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVS--DN-LNQIVISGGNDQTVKVWHFKQTGKP 494 (583)
Q Consensus 418 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~--s~-~~~~l~s~~~dg~i~iwd~~~~~~~ 494 (583)
--+--.++.++.+ .+..+.-+|...-+. +.+ .-.+-|+-+.. -| ...-|+.|-.||.|.--=+++. -
T Consensus 379 SLlVVc~~HiVlC-qekrLqClDF~Gvk~-ReW------~M~S~iRYikV~GGP~gREgL~vGlknGqV~kiF~dN~--~ 448 (1081)
T KOG1538|consen 379 SLLVVCANHIVLC-QEKRLQCLDFSGVKE-REW------QMESLIRYIKVIGGPPGREGLLVGLKNGQVLKIFVDNL--F 448 (1081)
T ss_pred eEEEEEcCeEEEE-cccceeeecccchhh-hhh------hHHHHHHhhhhhcCCCCcceeEEEecCCcEEEEEecCC--c
Confidence 1111123334333 345566666542111 111 00111111111 12 2245777888887654444444 4
Q ss_pred ceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCC
Q psy14906 495 PLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPD 555 (583)
Q Consensus 495 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d 555 (583)
++........|.|+.++.+.+.||+..+.++..++|+.+++.+..-. .+++++|+..
T Consensus 449 PiLl~~~~tAvrClDINA~R~kLAvVDD~~~c~v~DI~t~elL~QEp----g~nSV~wNT~ 505 (1081)
T KOG1538|consen 449 PILLLKQATAVRCLDINASRKKLAVVDDNDTCLVYDIDTKELLFQEP----GANSVAWNTQ 505 (1081)
T ss_pred hhheecccceeEEeeccCCcceEEEEccCCeEEEEEccCCceEeecC----CCceEEeecc
Confidence 55555566789999999999999999999999999999999876543 4677888763
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=214.53 Aligned_cols=288 Identities=17% Similarity=0.244 Sum_probs=224.7
Q ss_pred CcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc----eeEEEeccC---CCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE----SLMEFIQTW---GPVTALSFRTDGPPMMVSGSNTGHLTVWNL 234 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~----~~~~~~~~~---~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 234 (583)
.....++...++-..|+.++.. .+.||.+.... +...+.... -....+.|......+||+++..|.|.+||+
T Consensus 39 k~~~nAIs~nr~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdl 117 (839)
T KOG0269|consen 39 KAKANAISVNRDINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDL 117 (839)
T ss_pred ccccceEeecCCcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEec
Confidence 4556677788888888887654 67788765432 222222111 244567787655559999999999999999
Q ss_pred CC---CeehhhhhhccccceEEEEEecCC-CEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEE
Q psy14906 235 ED---RQVENQIKKAHRKVVTGAHFLYNE-PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNI 310 (583)
Q Consensus 235 ~~---~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 310 (583)
.. .+++..+ ..|+..++++.|++.. ++|++|++||.|++||+.. .+...++.+....|..+.|+|..+..+
T Consensus 118 nk~~rnk~l~~f-~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~----~~S~~t~~~nSESiRDV~fsp~~~~~F 192 (839)
T KOG0269|consen 118 NKSIRNKLLTVF-NEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRS----KKSKSTFRSNSESIRDVKFSPGYGNKF 192 (839)
T ss_pred CccccchhhhHh-hhhccceeeeeeccCCccEEEecCCCceEEEEeeec----ccccccccccchhhhceeeccCCCceE
Confidence 87 5666677 8999999999999864 5889999999999998863 344556667788899999999888888
Q ss_pred EEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEe
Q psy14906 311 LSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLW 390 (583)
Q Consensus 311 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 390 (583)
+++...|.+.+||++...
T Consensus 193 ~s~~dsG~lqlWDlRqp~-------------------------------------------------------------- 210 (839)
T KOG0269|consen 193 ASIHDSGYLQLWDLRQPD-------------------------------------------------------------- 210 (839)
T ss_pred EEecCCceEEEeeccCch--------------------------------------------------------------
Confidence 888888888888876432
Q ss_pred ecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCC
Q psy14906 391 SFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNL 470 (583)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 470 (583)
++...+ .+|.++|.|+.|+|+
T Consensus 211 ------------------------------------------------------r~~~k~-----~AH~GpV~c~nwhPn 231 (839)
T KOG0269|consen 211 ------------------------------------------------------RCEKKL-----TAHNGPVLCLNWHPN 231 (839)
T ss_pred ------------------------------------------------------hHHHHh-----hcccCceEEEeecCC
Confidence 122233 689999999999999
Q ss_pred CcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCc-EEEEEe--CCceEEEEEcccc-ceEEeecccccc
Q psy14906 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS-MLAVCL--DDFTVNIIDIDTC-TIIRKLSGHMGQ 546 (583)
Q Consensus 471 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~--~dg~i~i~d~~~~-~~~~~~~~h~~~ 546 (583)
+.+|||||.|+.|+|||..+....++.++....++.++.|-|+.+ .||+++ .|-.|+|||+... -+..++..|...
T Consensus 232 r~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~ 311 (839)
T KOG0269|consen 232 REWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDS 311 (839)
T ss_pred CceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCcc
Confidence 999999999999999999987667778888889999999999887 455554 4779999999755 345778899999
Q ss_pred eeeEEecC-CCcEEEEEeCCCeEEEEeCCCc
Q psy14906 547 LTDADFSP-DSRWLITASMDCTIRVWDIPSS 576 (583)
Q Consensus 547 v~~l~~s~-d~~~l~s~~~d~~i~vw~~~~~ 576 (583)
++.++|-. |...|.+++.|++|..-.++++
T Consensus 312 vt~i~W~~~d~~~l~s~sKD~tv~qh~~kna 342 (839)
T KOG0269|consen 312 VTGIAWDSGDRINLWSCSKDGTVLQHLFKNA 342 (839)
T ss_pred ccceeccCCCceeeEeecCccHHHHhhhhcc
Confidence 99999965 5667899999998876555443
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-25 Score=210.93 Aligned_cols=286 Identities=10% Similarity=0.106 Sum_probs=229.8
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCC-ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD-ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
.|....+.++|.|+|..|++++.||.|++|+.... +....+..+...|.+++.... .|++|+.+++|.+|...+++
T Consensus 11 aht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~---~f~~~s~~~tv~~y~fps~~ 87 (933)
T KOG1274|consen 11 AHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSN---HFLTGSEQNTVLRYKFPSGE 87 (933)
T ss_pred hccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeeccc---ceEEeeccceEEEeeCCCCC
Confidence 77888999999999999999999999999998766 444444446677888776544 69999999999999999887
Q ss_pred ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCc
Q psy14906 239 VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDST 318 (583)
Q Consensus 239 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 318 (583)
.-..+ ...+-++.+++|+.+|+++|.|+.|-.|++-+.+ .......+++|.++|.++.|+| .+.+|++.+-||.
T Consensus 88 ~~~iL-~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~----D~s~~~~lrgh~apVl~l~~~p-~~~fLAvss~dG~ 161 (933)
T KOG1274|consen 88 EDTIL-ARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLD----DSSQEKVLRGHDAPVLQLSYDP-KGNFLAVSSCDGK 161 (933)
T ss_pred cccee-eeeeccceEEEEecCCcEEEeecCceeEEEEecc----ccchheeecccCCceeeeeEcC-CCCEEEEEecCce
Confidence 66555 5567899999999999999999999999999776 4566778999999999999998 7999999999999
Q ss_pred EEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccc
Q psy14906 319 LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMD 398 (583)
Q Consensus 319 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 398 (583)
+++||+.++.+...+....... +..
T Consensus 162 v~iw~~~~~~~~~tl~~v~k~n--------------------------------------------------~~~----- 186 (933)
T KOG1274|consen 162 VQIWDLQDGILSKTLTGVDKDN--------------------------------------------------EFI----- 186 (933)
T ss_pred EEEEEcccchhhhhcccCCccc--------------------------------------------------ccc-----
Confidence 9999999887766552210000 000
Q ss_pred ceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee
Q psy14906 399 DMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG 478 (583)
Q Consensus 399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 478 (583)
....+..++|+|++..+++...|+.|.+|+..+......+.. ..+...+.+++|+|+|+|||+++
T Consensus 187 ------------~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~---~~~ss~~~~~~wsPnG~YiAAs~ 251 (933)
T KOG1274|consen 187 ------------LSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRD---KLSSSKFSDLQWSPNGKYIAAST 251 (933)
T ss_pred ------------ccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecc---cccccceEEEEEcCCCcEEeeec
Confidence 013567899999998999989999999999999988887754 34455599999999999999999
Q ss_pred cCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEE
Q psy14906 479 NDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNII 529 (583)
Q Consensus 479 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 529 (583)
.||.|.|||.++. .. ......|++++|.|+..-+-.-...|...+|
T Consensus 252 ~~g~I~vWnv~t~--~~---~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~~ 297 (933)
T KOG1274|consen 252 LDGQILVWNVDTH--ER---HEFKRAVCCEAWKPNANAITLITALGTLGVS 297 (933)
T ss_pred cCCcEEEEecccc--hh---ccccceeEEEecCCCCCeeEEEeeccccccC
Confidence 9999999999874 22 3334679999999998866554444444433
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-25 Score=200.61 Aligned_cols=315 Identities=14% Similarity=0.189 Sum_probs=239.0
Q ss_pred ccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 159 KRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 159 ~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
.+|.+.|.++...|.|.+||+|+.||+++||.+.+|.+++++... +.|.|++|+|.+..-+++......+.+-+..-|.
T Consensus 397 rGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d-~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~ 475 (733)
T KOG0650|consen 397 RGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFD-SEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGD 475 (733)
T ss_pred eccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeec-ceeEEEEecCCCCceeEEEEecCceEEeCccccc
Confidence 499999999999999999999999999999999999999999877 7999999999876444444444456666655442
Q ss_pred ehhhhhhccccceEEEEEecCCCEEEEE----eCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee
Q psy14906 239 VENQIKKAHRKVVTGAHFLYNEPLLVTS----SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 239 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~----~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 314 (583)
.+..- .+ ...|+++ ..++.+..|.-........-+...-.|...|..+.|+. .|++|++..
T Consensus 476 ~~e~~---~t-----------~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHr-kGDYlatV~ 540 (733)
T KOG0650|consen 476 RLEVG---PT-----------KELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHR-KGDYLATVM 540 (733)
T ss_pred hhhhc---ch-----------hhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeec-CCceEEEec
Confidence 22111 01 0111111 23456778843211111122445556889999999996 899999886
Q ss_pred CC---CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEee
Q psy14906 315 GD---STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWS 391 (583)
Q Consensus 315 ~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 391 (583)
.+ ..|.|.++........+.
T Consensus 541 ~~~~~~~VliHQLSK~~sQ~PF~--------------------------------------------------------- 563 (733)
T KOG0650|consen 541 PDSGNKSVLIHQLSKRKSQSPFR--------------------------------------------------------- 563 (733)
T ss_pred cCCCcceEEEEecccccccCchh---------------------------------------------------------
Confidence 64 457777766543321110
Q ss_pred cCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC
Q psy14906 392 FYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN 471 (583)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 471 (583)
...+.+.++.|+|...++++++... |++||+.....+..+ ......|..++.+|.|
T Consensus 564 ------------------kskG~vq~v~FHPs~p~lfVaTq~~-vRiYdL~kqelvKkL-----~tg~kwiS~msihp~G 619 (733)
T KOG0650|consen 564 ------------------KSKGLVQRVKFHPSKPYLFVATQRS-VRIYDLSKQELVKKL-----LTGSKWISSMSIHPNG 619 (733)
T ss_pred ------------------hcCCceeEEEecCCCceEEEEeccc-eEEEehhHHHHHHHH-----hcCCeeeeeeeecCCC
Confidence 0016789999999999999988754 999999998888887 5677889999999999
Q ss_pred cEEEEeecCCcEEEEEccCCCCCceEEeecc-CCeeeEEeccCCcEEEEEeCCceEEEEEcc------cc---ceEEeec
Q psy14906 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSMLAVCLDDFTVNIIDID------TC---TIIRKLS 541 (583)
Q Consensus 472 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~------~~---~~~~~~~ 541 (583)
.-|+.++.|+.+..+|++-.. ++.+.+.++ ..+++++|++.-.++|+|+.||++.||.-. .. -++..++
T Consensus 620 Dnli~gs~d~k~~WfDldlss-kPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~ 698 (733)
T KOG0650|consen 620 DNLILGSYDKKMCWFDLDLSS-KPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLR 698 (733)
T ss_pred CeEEEecCCCeeEEEEcccCc-chhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeecc
Confidence 999999999999999998764 455555544 689999999999999999999999998532 11 2457888
Q ss_pred ccccc----eeeEEecCCCcEEEEEeCCCeEEEE
Q psy14906 542 GHMGQ----LTDADFSPDSRWLITASMDCTIRVW 571 (583)
Q Consensus 542 ~h~~~----v~~l~~s~d~~~l~s~~~d~~i~vw 571 (583)
+|... |.++.|+|...+|++++.||+|++|
T Consensus 699 gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 699 GHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred CceeecccceEeecccCCCceEEecCCCceEEee
Confidence 99866 8999999999999999999999998
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.9e-26 Score=203.19 Aligned_cols=314 Identities=19% Similarity=0.248 Sum_probs=232.0
Q ss_pred eeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCC--EE
Q psy14906 102 DIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD--II 177 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l 177 (583)
.+...+.||++.|.+| .|.|.+||+|+.||+|+||.+.+|+++.+..+ .+.|.|++|+|.++ .|
T Consensus 391 ~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~------------d~~I~~vaw~P~~~~~vL 458 (733)
T KOG0650|consen 391 RCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQF------------DSEIRSVAWNPLSDLCVL 458 (733)
T ss_pred eeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEee------------cceeEEEEecCCCCceeE
Confidence 3455678999999998 78999999999999999999999999999964 57999999999776 55
Q ss_pred EEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEE----cCCCcEEEEeCCCCee----hhhhhhcccc
Q psy14906 178 GVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG----SNTGHLTVWNLEDRQV----ENQIKKAHRK 249 (583)
Q Consensus 178 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~----~~dg~i~vwd~~~~~~----~~~~~~~~~~ 249 (583)
|++.... +.|.+..-|..+..-. ... +|+++ ..++.+..|.-...+. ++.. -.|..
T Consensus 459 AvA~~~~-~~ivnp~~G~~~e~~~-------------t~e-ll~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~-I~~~k 522 (733)
T KOG0650|consen 459 AVAVGEC-VLIVNPIFGDRLEVGP-------------TKE-LLASAPNESEPDAAVVTWSRASLDELEKGVCIV-IKHPK 522 (733)
T ss_pred EEEecCc-eEEeCccccchhhhcc-------------hhh-hhhcCCCccCCcccceeechhhhhhhccceEEE-EecCC
Confidence 6555544 6666655453222111 011 22222 2345677786553221 2222 46889
Q ss_pred ceEEEEEecCCCEEEEEeCC---CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccc
Q psy14906 250 VVTGAHFLYNEPLLVTSSPD---NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 250 ~v~~~~~~~~~~~l~s~~~d---~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 326 (583)
.|..+.|+..|.||++...+ ..|.|+++.. ......++...+.|.++.|+| ...+|+.++. ..|++||+..
T Consensus 523 ~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK----~~sQ~PF~kskG~vq~v~FHP-s~p~lfVaTq-~~vRiYdL~k 596 (733)
T KOG0650|consen 523 SIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSK----RKSQSPFRKSKGLVQRVKFHP-SKPYLFVATQ-RSVRIYDLSK 596 (733)
T ss_pred ccceeeeecCCceEEEeccCCCcceEEEEeccc----ccccCchhhcCCceeEEEecC-CCceEEEEec-cceEEEehhH
Confidence 99999999999999997654 5688886652 233344555567899999998 5667776665 6899999988
Q ss_pred cccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccc
Q psy14906 327 ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPER 406 (583)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 406 (583)
....+.+....
T Consensus 597 qelvKkL~tg~--------------------------------------------------------------------- 607 (733)
T KOG0650|consen 597 QELVKKLLTGS--------------------------------------------------------------------- 607 (733)
T ss_pred HHHHHHHhcCC---------------------------------------------------------------------
Confidence 76655442210
Q ss_pred ccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccC-ccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEE
Q psy14906 407 CKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSG-AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKV 485 (583)
Q Consensus 407 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~i 485 (583)
..+..++++|.|..|++|+.|+.+..||+.-. +..+.+ .-|...+++++|++.-.++++|+.||++.|
T Consensus 608 ------kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~l-----r~H~~avr~Va~H~ryPLfas~sdDgtv~V 676 (733)
T KOG0650|consen 608 ------KWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTL-----RLHEKAVRSVAFHKRYPLFASGSDDGTVIV 676 (733)
T ss_pred ------eeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHh-----hhhhhhhhhhhhccccceeeeecCCCcEEE
Confidence 45889999999999999999999999999854 455555 789999999999999999999999999999
Q ss_pred EEcc------CC-CCCceEEeecc-----CCeeeEEeccCCcEEEEEeCCceEEEE
Q psy14906 486 WHFK------QT-GKPPLRSIKLD-----NGISFFRTHQESSMLAVCLDDFTVNII 529 (583)
Q Consensus 486 wd~~------~~-~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~dg~i~i~ 529 (583)
+.-. .+ ..-++..+..+ -.|....|+|...+|++++.||+|++|
T Consensus 677 fhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 677 FHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred EeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 8432 22 01123344433 257888999999999999999999998
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.2e-26 Score=204.34 Aligned_cols=316 Identities=13% Similarity=0.167 Sum_probs=220.1
Q ss_pred EEEEec--CCCCEEEEEcCCCcEEEEeCCCCeeh------hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q psy14906 209 ALSFRT--DGPPMMVSGSNTGHLTVWNLEDRQVE------NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA 280 (583)
Q Consensus 209 ~~~~~~--~~~~~l~s~~~dg~i~vwd~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~ 280 (583)
+..|++ +.+++|+.+.+||.|.++|....... ... ..|...|..+.|.|....|++++.|.++++||+...
T Consensus 54 ~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~-~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s 132 (720)
T KOG0321|consen 54 ADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKP-LAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTS 132 (720)
T ss_pred cccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhccc-ccccceeEeeccCCCceeEEEccCCceeeeeeeccc
Confidence 356654 45568999999999999998754332 333 689999999999998789999999999999977533
Q ss_pred CCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCc
Q psy14906 281 DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPP 360 (583)
Q Consensus 281 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (583)
...-...+.+|...|.+++|.|.+...|++|+.||.|.+||++-...........
T Consensus 133 --~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~----------------------- 187 (720)
T KOG0321|consen 133 --RLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDN----------------------- 187 (720)
T ss_pred --eeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhh-----------------------
Confidence 2222334889999999999999888999999999999999997654111000000
Q ss_pred cceeeeecccccccccEEEEecCCceEEEeecCccc--ccceeeecccccccCCCCceE---EEEccCCcEEEEEec-Cc
Q psy14906 361 VSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSK--MDDMFLVPERCKQAKQSKPTC---VYITHCGNFVLIGYS-SG 434 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~---~~~s~~~~~l~~~~~-dg 434 (583)
+++...+.. ..............+...|.+ +.+..|...||+++. |+
T Consensus 188 ---------------------------~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~ 240 (720)
T KOG0321|consen 188 ---------------------------RIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADS 240 (720)
T ss_pred ---------------------------hhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCc
Confidence 000000000 000000000000111123333 556677888888776 99
Q ss_pred eEEEEEcccCccccccCCC---CCCCc---ccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccC---Ce
Q psy14906 435 HVDRFNIQSGAHRGSYGHD---NQPGH---VGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN---GI 505 (583)
Q Consensus 435 ~i~i~d~~~~~~~~~~~~~---~~~~h---~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~v 505 (583)
.|++||++........... .+..| ...+.++.....|.+|+..+.|+.|+.|++......++..+.+.- --
T Consensus 241 ~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~ 320 (720)
T KOG0321|consen 241 TIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFY 320 (720)
T ss_pred ceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceee
Confidence 9999999876544332111 11233 446778888888898888888999999999987656665555432 12
Q ss_pred eeEEeccCCcEEEEEeCCceEEEEEccccce-EEeecccccceeeEEecCC-CcEEEEEeCCCeEEEEeCCCcc
Q psy14906 506 SFFRTHQESSMLAVCLDDFTVNIIDIDTCTI-IRKLSGHMGQLTDADFSPD-SRWLITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 506 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~h~~~v~~l~~s~d-~~~l~s~~~d~~i~vw~~~~~~ 577 (583)
..-..+||+.+|++|+.|...++|.+.+.+. ...+.+|.-.|++++|.|. -.-+|+++.|..+++|++.++-
T Consensus 321 vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l 394 (720)
T KOG0321|consen 321 VKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNGL 394 (720)
T ss_pred eeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCch
Confidence 2336789999999999999999999987653 4667899999999999883 2347788999999999997653
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.2e-25 Score=191.65 Aligned_cols=292 Identities=14% Similarity=0.163 Sum_probs=228.7
Q ss_pred cCCcceEEEeeCCCC--CEEEEEecCCeEEEEEccCC----ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q psy14906 160 RWNSCVNVLEPSPVV--DIIGVGLSNKKIILHNILTD----ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWN 233 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~--~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 233 (583)
.+.++|++++|+|.. +++|+|...|+|-+||+.+. ..+..+..|..+|.++.|+|.+...+++.+.||+|++-|
T Consensus 184 v~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D 263 (498)
T KOG4328|consen 184 VTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQD 263 (498)
T ss_pred ecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeee
Confidence 678999999999965 48899999999999999533 345667899999999999998877899999999999999
Q ss_pred CCCCeehhhhh-hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEE
Q psy14906 234 LEDRQVENQIK-KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILS 312 (583)
Q Consensus 234 ~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 312 (583)
++.+.....+. ......+..+.|+.+...++.++.=|...+||+... +.....+.-|...|.+++++|....+|++
T Consensus 264 ~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~---~s~~~~~~lh~kKI~sv~~NP~~p~~laT 340 (498)
T KOG4328|consen 264 FEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTD---GSEYENLRLHKKKITSVALNPVCPWFLAT 340 (498)
T ss_pred ecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecC---CccchhhhhhhcccceeecCCCCchheee
Confidence 99765444331 124456778888888888888887789999987754 33445566688899999999988899999
Q ss_pred eeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeec
Q psy14906 313 AAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSF 392 (583)
Q Consensus 313 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 392 (583)
++.|++.+|||++.-....
T Consensus 341 ~s~D~T~kIWD~R~l~~K~------------------------------------------------------------- 359 (498)
T KOG4328|consen 341 ASLDQTAKIWDLRQLRGKA------------------------------------------------------------- 359 (498)
T ss_pred cccCcceeeeehhhhcCCC-------------------------------------------------------------
Confidence 9999999999987532110
Q ss_pred CcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc
Q psy14906 393 YKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472 (583)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 472 (583)
. | .+.. ..|...|.+..|||.+-
T Consensus 360 --------------------s--------p-----------------------~lst------~~HrrsV~sAyFSPs~g 382 (498)
T KOG4328|consen 360 --------------------S--------P-----------------------FLST------LPHRRSVNSAYFSPSGG 382 (498)
T ss_pred --------------------C--------c-----------------------ceec------ccccceeeeeEEcCCCC
Confidence 0 0 0111 47999999999999887
Q ss_pred EEEEeecCCcEEEEEcc----CCCCCceEEeeccC------CeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecc
Q psy14906 473 IVISGGNDQTVKVWHFK----QTGKPPLRSIKLDN------GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG 542 (583)
Q Consensus 473 ~l~s~~~dg~i~iwd~~----~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 542 (583)
.|+|.+.|..|+|||.. .. .+...+.|.. .....+|.|+..++++|-.-..|-|+|-..++.+..+..
T Consensus 383 tl~TT~~D~~IRv~dss~~sa~~--~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~ 460 (498)
T KOG4328|consen 383 TLLTTCQDNEIRVFDSSCISAKD--EPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHD 460 (498)
T ss_pred ceEeeccCCceEEeecccccccC--CccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccC
Confidence 79999999999999983 33 6667777654 244568999999999999999999999999998877654
Q ss_pred ccc-ceeeE-EecCCCc-EEEEEeCCCeEEEEeCC
Q psy14906 543 HMG-QLTDA-DFSPDSR-WLITASMDCTIRVWDIP 574 (583)
Q Consensus 543 h~~-~v~~l-~~s~d~~-~l~s~~~d~~i~vw~~~ 574 (583)
... .|.++ .|+|-+. +++-++..|.|+||--+
T Consensus 461 P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft~k 495 (498)
T KOG4328|consen 461 PESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFTNK 495 (498)
T ss_pred ccccccccceeecccccceeccCCccceEEEEecC
Confidence 443 56654 7999777 45555567889998654
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-24 Score=197.64 Aligned_cols=275 Identities=18% Similarity=0.240 Sum_probs=211.4
Q ss_pred cEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEE
Q psy14906 113 PVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHN 190 (583)
Q Consensus 113 ~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~ 190 (583)
.|..+ .|||..|+.+. +..+.++|...|..+++++ +|...|.|++|+.||+++|+|+.|..|.+|+
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLK-----------gHKDtVycVAys~dGkrFASG~aDK~VI~W~ 81 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLK-----------GHKDTVYCVAYAKDGKRFASGSADKSVIIWT 81 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCcccccccc-----------cccceEEEEEEccCCceeccCCCceeEEEec
Confidence 45544 89998887764 6689999999999999998 9999999999999999999999999999998
Q ss_pred ccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCC
Q psy14906 191 ILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN 270 (583)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 270 (583)
.+ -+-+..+ .|.+.|.|+.|+|-.. .|++++-+ ..-+|..+.....+ . .....+.+++|..||++|+.|-.+|
T Consensus 82 ~k-lEG~LkY-SH~D~IQCMsFNP~~h-~LasCsLs-dFglWS~~qK~V~K-~--kss~R~~~CsWtnDGqylalG~~nG 154 (1081)
T KOG1538|consen 82 SK-LEGILKY-SHNDAIQCMSFNPITH-QLASCSLS-DFGLWSPEQKSVSK-H--KSSSRIICCSWTNDGQYLALGMFNG 154 (1081)
T ss_pred cc-ccceeee-ccCCeeeEeecCchHH-Hhhhcchh-hccccChhhhhHHh-h--hhheeEEEeeecCCCcEEEEeccCc
Confidence 65 2223233 5779999999999988 78887753 57889876443322 2 2456889999999999999999999
Q ss_pred eEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCC----CEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhh
Q psy14906 271 TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSS----DNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRK 346 (583)
Q Consensus 271 ~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 346 (583)
+|.+-+ ........+....+...+|.+++|+|..+ ..++......++.++.+.....-+.
T Consensus 155 TIsiRN--k~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~LsG~~Igk~-------------- 218 (1081)
T KOG1538|consen 155 TISIRN--KNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLSGKQIGKD-------------- 218 (1081)
T ss_pred eEEeec--CCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEecceeeccc--------------
Confidence 999984 32223344455556788999999998544 3555556666666665543211100
Q ss_pred cchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcE
Q psy14906 347 NRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNF 426 (583)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 426 (583)
..-.....|+.+.++|.+
T Consensus 219 --------------------------------------------------------------r~L~FdP~CisYf~NGEy 236 (1081)
T KOG1538|consen 219 --------------------------------------------------------------RALNFDPCCISYFTNGEY 236 (1081)
T ss_pred --------------------------------------------------------------ccCCCCchhheeccCCcE
Confidence 000145779999999999
Q ss_pred EEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccC
Q psy14906 427 VLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQ 490 (583)
Q Consensus 427 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 490 (583)
+++|+.|+.+.+|.. .|-.+.++ ......|+.++..|++++++.|+.||+|..|++..
T Consensus 237 ~LiGGsdk~L~~fTR-~GvrLGTv-----g~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~f 294 (1081)
T KOG1538|consen 237 ILLGGSDKQLSLFTR-DGVRLGTV-----GEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLIF 294 (1081)
T ss_pred EEEccCCCceEEEee-cCeEEeec-----cccceeEEEEEEccCCceEEEEEccCeeehhhhHH
Confidence 999999999999974 45566666 45678999999999999999999999999998753
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-24 Score=179.90 Aligned_cols=266 Identities=15% Similarity=0.222 Sum_probs=202.0
Q ss_pred hhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEee-CCCCEEEEeeCCCcEE
Q psy14906 242 QIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG-NSSDNILSAAGDSTLR 320 (583)
Q Consensus 242 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~ 320 (583)
.+..+|.+-|.++.|.+-|+.+|+|+.|++++|||.+..+++..+....+.|.+.|..+.|.+ .-|+.+++++.|+++.
T Consensus 7 pi~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~ 86 (361)
T KOG2445|consen 7 PIDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVS 86 (361)
T ss_pred ccccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCcee
Confidence 344679999999999999999999999999999998777788888999999999999999975 4589999999999999
Q ss_pred EEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccce
Q psy14906 321 IFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDM 400 (583)
Q Consensus 321 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 400 (583)
+|.-....... .-+-|..
T Consensus 87 iWEE~~~~~~~------------------------------------------------------~~~~Wv~-------- 104 (361)
T KOG2445|consen 87 IWEEQEKSEEA------------------------------------------------------HGRRWVR-------- 104 (361)
T ss_pred eeeeccccccc------------------------------------------------------ccceeEE--------
Confidence 99854211100 0000100
Q ss_pred eeecccccccCCCCceEEEEccC--CcEEEEEecCceEEEEEcccCccccc------cC--CCCCCCcccCeeEEEEeCC
Q psy14906 401 FLVPERCKQAKQSKPTCVYITHC--GNFVLIGYSSGHVDRFNIQSGAHRGS------YG--HDNQPGHVGGVRGVVSDNL 470 (583)
Q Consensus 401 ~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~i~i~d~~~~~~~~~------~~--~~~~~~h~~~v~~~~~s~~ 470 (583)
..........++.+.|.|. |-.+++++.||.++||+....-.+.. +. ......+..+..|+.|+|.
T Consensus 105 ----~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~s 180 (361)
T KOG2445|consen 105 ----RTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPS 180 (361)
T ss_pred ----EEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccccCcceEEeeccc
Confidence 0011111267999999995 77899999999999998765332222 21 0011356778899999974
Q ss_pred ---CcEEEEeecC-----CcEEEEEccCCCCCceEE---eeccCCeeeEEeccCC----cEEEEEeCCceEEEEEcccc-
Q psy14906 471 ---NQIVISGGND-----QTVKVWHFKQTGKPPLRS---IKLDNGISFFRTHQES----SMLAVCLDDFTVNIIDIDTC- 534 (583)
Q Consensus 471 ---~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~---~~~~~~v~~~~~s~~~----~~l~~~~~dg~i~i~d~~~~- 534 (583)
..+||.|+.+ +.++||.......+..+. ..+..+|+.++|.|+- .+||+++.|| |+||.+...
T Consensus 181 r~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~~~~ 259 (361)
T KOG2445|consen 181 RMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG-VRIFKVKVAR 259 (361)
T ss_pred cccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc-EEEEEEeecc
Confidence 3578888766 479999987765343332 2455799999999963 4899999999 999998731
Q ss_pred -------------------ceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 535 -------------------TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 535 -------------------~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
+.+..+.+|.+.|..+.|+-.|..|++.|.||+|++|...
T Consensus 260 s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 260 SAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred chhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 2456678999999999999999999999999999999764
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-25 Score=199.27 Aligned_cols=284 Identities=17% Similarity=0.182 Sum_probs=206.7
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEE------EEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCC
Q psy14906 121 GPHLISVDEESNVKVWDIKAEETY------LELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD 194 (583)
Q Consensus 121 ~~~l~s~~~dg~i~iwd~~~~~~~------~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~ 194 (583)
...||.+.+||.|.++|....... .... .|...|..+.|-|....|++++.|.++++||++++
T Consensus 64 eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~-----------aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s 132 (720)
T KOG0321|consen 64 EHILAVADEDGGIILFDTKSIVFRLEERQLKKPL-----------AHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTS 132 (720)
T ss_pred cceEEEecCCCceeeecchhhhcchhhhhhcccc-----------cccceeEeeccCCCceeEEEccCCceeeeeeeccc
Confidence 357888999999999998763322 2222 89999999999997778999999999999999999
Q ss_pred ceeEE--EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee--h----hhhh--------------------hc
Q psy14906 195 ESLME--FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV--E----NQIK--------------------KA 246 (583)
Q Consensus 195 ~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~----~~~~--------------------~~ 246 (583)
+++.. +.+|.+.|.+++|.|.++.+|++|+.||.|.|||++-... . ..+. ..
T Consensus 133 ~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA 212 (720)
T KOG0321|consen 133 RLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKA 212 (720)
T ss_pred eeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccccc
Confidence 88877 8899999999999999988999999999999999864320 0 0000 23
Q ss_pred cccceEE---EEEecCCCEEEEEeC-CCeEEEEEccCCCCCc--e--eeEEeccC---CCCCeeEEEeeCCCCEEEEeeC
Q psy14906 247 HRKVVTG---AHFLYNEPLLVTSSP-DNTLKLWIFDKADGNG--R--LLRIREGH---SAPPNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 247 ~~~~v~~---~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~--~--~~~~~~~~---~~~v~~~~~~~~~~~~l~~~~~ 315 (583)
+...|.+ +.+..|...||+++. |+.|++||+....... . ....+..| .-.+.++.... .|.+|++.+.
T Consensus 213 ~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDs-sGt~L~AsCt 291 (720)
T KOG0321|consen 213 ASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDS-SGTYLFASCT 291 (720)
T ss_pred ccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecC-CCCeEEEEec
Confidence 3344554 556678889999988 9999999886432111 1 11122223 23456666664 5788888888
Q ss_pred CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcc
Q psy14906 316 DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKS 395 (583)
Q Consensus 316 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 395 (583)
|+.|++|++.+............ ..
T Consensus 292 D~sIy~ynm~s~s~sP~~~~sg~----------------------------------------------~~--------- 316 (720)
T KOG0321|consen 292 DNSIYFYNMRSLSISPVAEFSGK----------------------------------------------LN--------- 316 (720)
T ss_pred CCcEEEEeccccCcCchhhccCc----------------------------------------------cc---------
Confidence 99999999876433211100000 00
Q ss_pred cccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC-cEE
Q psy14906 396 KMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN-QIV 474 (583)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l 474 (583)
...-..-..+||+.++++|+.|...++|.+.+.+....+. .+|...|++++|.|.. .-+
T Consensus 317 ----------------~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l----~Ght~eVt~V~w~pS~~t~v 376 (720)
T KOG0321|consen 317 ----------------SSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALL----LGHTREVTTVRWLPSATTPV 376 (720)
T ss_pred ----------------ceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhh----hCcceEEEEEeeccccCCCc
Confidence 0112234568999999999999999999998776544432 6999999999998743 357
Q ss_pred EEeecCCcEEEEEccCC
Q psy14906 475 ISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 475 ~s~~~dg~i~iwd~~~~ 491 (583)
+++++|-.++||++..+
T Consensus 377 ~TcSdD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 377 ATCSDDFRVKIWRLSNG 393 (720)
T ss_pred eeeccCcceEEEeccCc
Confidence 77899999999999665
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-25 Score=208.56 Aligned_cols=293 Identities=14% Similarity=0.177 Sum_probs=217.0
Q ss_pred ceeeeeeeeeeecCcccEEEEEeCCCceEEEEeeCCeEEEEecCC----cEEEeecCCCCCCeE---EEEe----eCeEE
Q psy14906 18 IFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNH----FKLLSVSPQHEDDIT---CLSS----DFFHI 86 (583)
Q Consensus 18 ~~~~~~~~g~~~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~----~~~~~~~~~h~~~v~---~~~~----~~~~~ 86 (583)
-+.|++..-.--.....++...++..+ |+.+....+.+|-++. .++..........-. .+.+ +..++
T Consensus 27 s~l~~~~~~~~~k~~~nAIs~nr~~~q--iv~AGrs~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIA 104 (839)
T KOG0269|consen 27 SYLPYDKMNCKLKAKANAISVNRDINQ--IVVAGRSLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIA 104 (839)
T ss_pred ccccchheeeecccccceEeecCCcce--eEEecccceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhhe
Confidence 556777544212334455566555555 4444555666666542 222222221111111 1222 23466
Q ss_pred EEEcCCeEEEEeccc----eeeeeecccCccEEEE---ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecc
Q psy14906 87 YTSANNIIYAWRRGI----DIVGTYKGHTSPVHLI---LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGK 159 (583)
Q Consensus 87 ~~~~~~~i~vw~~~~----~~~~~~~~h~~~v~~i---s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 159 (583)
+++..|.|.+||++. +++..|..|+..++++ +-...+|++|++||+|++||++...-..++.
T Consensus 105 T~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~----------- 173 (839)
T KOG0269|consen 105 TCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFR----------- 173 (839)
T ss_pred eecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccccccc-----------
Confidence 777899999999754 5667899999999998 4455799999999999999999988777776
Q ss_pred cCCcceEEEeeCC-CCCEEEEEecCCeEEEEEccCC-ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC
Q psy14906 160 RWNSCVNVLEPSP-VVDIIGVGLSNKKIILHNILTD-ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR 237 (583)
Q Consensus 160 ~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 237 (583)
+....|+.+.|+| .+..++++...|.+++||++.. ++...+..|.++|.|+.|+|++. +||+|+.|+.|+|||+.+.
T Consensus 174 ~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~-~lATGGRDK~vkiWd~t~~ 252 (839)
T KOG0269|consen 174 SNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNRE-WLATGGRDKMVKIWDMTDS 252 (839)
T ss_pred ccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCc-eeeecCCCccEEEEeccCC
Confidence 7789999999999 5778999999999999999754 56777889999999999999888 9999999999999999876
Q ss_pred eehhhhhhccccceEEEEEecCCC-EEEEEe--CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee
Q psy14906 238 QVENQIKKAHRKVVTGAHFLYNEP-LLVTSS--PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 238 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~--~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 314 (583)
+........-..+|.++.|-|+.. +|++++ .|..|+|||+.. ...+..++..|...++.++|...|...+.+++
T Consensus 253 ~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrR---PYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~s 329 (839)
T KOG0269|consen 253 RAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRR---PYIPYATFLEHTDSVTGIAWDSGDRINLWSCS 329 (839)
T ss_pred CccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeecc---ccccceeeeccCccccceeccCCCceeeEeec
Confidence 543333223457899999999876 466554 478999998764 45667888999999999999866678899999
Q ss_pred CCCcEEEEEcccc
Q psy14906 315 GDSTLRIFNTKSE 327 (583)
Q Consensus 315 ~dg~i~iwd~~~~ 327 (583)
.||++..-..++.
T Consensus 330 KD~tv~qh~~kna 342 (839)
T KOG0269|consen 330 KDGTVLQHLFKNA 342 (839)
T ss_pred CccHHHHhhhhcc
Confidence 9999876655544
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-24 Score=204.67 Aligned_cols=239 Identities=18% Similarity=0.226 Sum_probs=197.5
Q ss_pred CCCCCeEEEEe--eC-eEEEEEcCCeEEEEeccc--eeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEE
Q psy14906 71 QHEDDITCLSS--DF-FHIYTSANNIIYAWRRGI--DIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYL 145 (583)
Q Consensus 71 ~h~~~v~~~~~--~~-~~~~~~~~~~i~vw~~~~--~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~ 145 (583)
.|...-+.+++ +| .+++++.|+.|++|+... +.-.++.-+...|.++.-++.+|++++.+++|.++.+.+++.-.
T Consensus 11 aht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~~ 90 (933)
T KOG1274|consen 11 AHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEEDT 90 (933)
T ss_pred hccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCccc
Confidence 47777777777 45 466778999999999532 33334444889999998888899999999999999999987554
Q ss_pred EeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcC
Q psy14906 146 ELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSN 225 (583)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 225 (583)
.+. ...-++++++|+.+|+++|.|+.|-.|++.+..+......+++|.++|.++.|+|++. +||+.+-
T Consensus 91 iL~-----------Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~-fLAvss~ 158 (933)
T KOG1274|consen 91 ILA-----------RFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGN-FLAVSSC 158 (933)
T ss_pred eee-----------eeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCC-EEEEEec
Confidence 444 4567899999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCcEEEEeCCCCeehhhhhhc-------cccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEec--cCCCC
Q psy14906 226 TGHLTVWNLEDRQVENQIKKA-------HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE--GHSAP 296 (583)
Q Consensus 226 dg~i~vwd~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~--~~~~~ 296 (583)
||.|++||++++.+...+..- ....+..++|+|++..|+....|+.|++|+.+ .+.....+. .+...
T Consensus 159 dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~----~we~~f~Lr~~~~ss~ 234 (933)
T KOG1274|consen 159 DGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRK----GWELQFKLRDKLSSSK 234 (933)
T ss_pred CceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccC----Cceeheeecccccccc
Confidence 999999999999887776311 13456779999998888888899999999544 333333333 34455
Q ss_pred CeeEEEeeCCCCEEEEeeCCCcEEEEEccc
Q psy14906 297 PNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 297 v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 326 (583)
+..+.|+| +|++|++++.||.|.+||.++
T Consensus 235 ~~~~~wsP-nG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 235 FSDLQWSP-NGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred eEEEEEcC-CCcEEeeeccCCcEEEEeccc
Confidence 89999998 799999999999999999986
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-25 Score=194.34 Aligned_cols=292 Identities=13% Similarity=0.196 Sum_probs=225.9
Q ss_pred EecCCeEEEEEccCCceeEEEeccC--CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee-hhhhhhccccceEEEEE
Q psy14906 180 GLSNKKIILHNILTDESLMEFIQTW--GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV-ENQIKKAHRKVVTGAHF 256 (583)
Q Consensus 180 ~~~d~~i~iw~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~ 256 (583)
++....+++||+...+....+..|+ ..+.++.|.......+++.+.|..+++|.-..... +..+.....+.-.|++.
T Consensus 8 aS~gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~ 87 (673)
T KOG4378|consen 8 ASTGDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVAC 87 (673)
T ss_pred eccCCceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccchHHHHhh
Confidence 3344479999998776665555443 24888889877642334445677899997543210 11110111223345555
Q ss_pred ecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccc
Q psy14906 257 LYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIA 336 (583)
Q Consensus 257 ~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 336 (583)
.....++++|+..+.|+|||+. ...+.+.+.+|...|+++.|.- ...+|++++..|.|.+..+.++.....+..+
T Consensus 88 ~s~S~y~~sgG~~~~Vkiwdl~----~kl~hr~lkdh~stvt~v~YN~-~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~ 162 (673)
T KOG4378|consen 88 ASQSLYEISGGQSGCVKIWDLR----AKLIHRFLKDHQSTVTYVDYNN-TDEYIASVSDGGDIIIHGTKTKQKTTTFTID 162 (673)
T ss_pred hhcceeeeccCcCceeeehhhH----HHHHhhhccCCcceeEEEEecC-CcceeEEeccCCcEEEEecccCccccceecC
Confidence 5556899999999999999875 4566778899999999999985 6789999999999999999887665554332
Q ss_pred hhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCce
Q psy14906 337 SANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT 416 (583)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 416 (583)
+. ..+.
T Consensus 163 sg--------------------------------------------------------------------------qsvR 168 (673)
T KOG4378|consen 163 SG--------------------------------------------------------------------------QSVR 168 (673)
T ss_pred CC--------------------------------------------------------------------------CeEE
Confidence 11 2355
Q ss_pred EEEEccCCcE-EEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC-cEEEEeecCCcEEEEEccCCCCC
Q psy14906 417 CVYITHCGNF-VLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN-QIVISGGNDQTVKVWHFKQTGKP 494 (583)
Q Consensus 417 ~~~~s~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~ 494 (583)
-+.|+|..+. |.+++.+|.|.+||+....+...+. ..|..+...|+|+|.. .+|++.+.|..|.+||.... .
T Consensus 169 ll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~----~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~--~ 242 (673)
T KOG4378|consen 169 LLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHAS----EAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQ--A 242 (673)
T ss_pred EeecccccceeeEeeccCCeEEEEeccCCCcccchh----hhccCCcCcceecCCccceEEEecccceEEEeecccc--c
Confidence 7788887654 5668899999999999888877765 6899999999999955 57899999999999999987 8
Q ss_pred ceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccc-cceEEeecccccceeeEEecCCC
Q psy14906 495 PLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT-CTIIRKLSGHMGQLTDADFSPDS 556 (583)
Q Consensus 495 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~h~~~v~~l~~s~d~ 556 (583)
....+....+.+.++|+++|.+|++|...|.|..||++. ..++.++..|...|++++|-|..
T Consensus 243 s~~~l~y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 243 STDRLTYSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred ccceeeecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence 888888899999999999999999999999999999985 46788899999999999997754
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-22 Score=196.88 Aligned_cols=370 Identities=27% Similarity=0.470 Sum_probs=289.9
Q ss_pred eecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCc-EEEEeeccCCceEEecccCC-cceEEEee-CCCCC-EEEE
Q psy14906 106 TYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEE-TYLELSFDNDTFKIMGKRWN-SCVNVLEP-SPVVD-IIGV 179 (583)
Q Consensus 106 ~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~-~~i~~~~~-s~~~~-~l~~ 179 (583)
.+..|...+..+ .+.+..++.++.|+.+.+|+...+. .+..+. ... ..+..+.+ ++++. .++.
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 128 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLE-----------GLHDSSVSKLALSSPDGNSILLA 128 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEe-----------ccCCCceeeEEEECCCcceEEec
Confidence 566888888886 7888999999999999999999887 566665 322 36777777 88887 5555
Q ss_pred Eec-CCeEEEEEccC-CceeEEEeccCCCeEEEEEecCCCCEEEEEcC-CCcEEEEeCCCCeehhhhhhccccceEEEEE
Q psy14906 180 GLS-NKKIILHNILT-DESLMEFIQTWGPVTALSFRTDGPPMMVSGSN-TGHLTVWNLEDRQVENQIKKAHRKVVTGAHF 256 (583)
Q Consensus 180 ~~~-d~~i~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~ 256 (583)
.+. ++.+.+|+... ......+..|...|..++|+|++. .+++++. ++.+++|+...+..+..+ .+|...+.+++|
T Consensus 129 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~ 206 (466)
T COG2319 129 SSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGK-LLASGSSLDGTIKLWDLRTGKPLSTL-AGHTDPVSSLAF 206 (466)
T ss_pred cCCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCC-EEEecCCCCCceEEEEcCCCceEEee-ccCCCceEEEEE
Confidence 444 89999999987 788888999999999999999998 7788875 999999999988888888 679999999999
Q ss_pred ecCCC-EEEEEeCCCeEEEEEccCCCCCceeeE-EeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccccc-ceee
Q psy14906 257 LYNEP-LLVTSSPDNTLKLWIFDKADGNGRLLR-IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETS-NKNL 333 (583)
Q Consensus 257 ~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~ 333 (583)
+|++. .+++++.|+.+++|+.. ...... .+.+|.... ...|+| ++..+++++.|+.+++|+...... ...+
T Consensus 207 ~~~~~~~~~~~~~d~~i~~wd~~----~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 280 (466)
T COG2319 207 SPDGGLLIASGSSDGTIRLWDLS----TGKLLRSTLSGHSDSV-VSSFSP-DGSLLASGSSDGTIRLWDLRSSSSLLRTL 280 (466)
T ss_pred cCCcceEEEEecCCCcEEEEECC----CCcEEeeecCCCCcce-eEeECC-CCCEEEEecCCCcEEEeeecCCCcEEEEE
Confidence 99998 55555899999999543 345555 678887775 447887 668888999999999999876543 0000
Q ss_pred ccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCC
Q psy14906 334 GIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQS 413 (583)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (583)
..+..
T Consensus 281 ---------------------------------------------------------------------------~~~~~ 285 (466)
T COG2319 281 ---------------------------------------------------------------------------SGHSS 285 (466)
T ss_pred ---------------------------------------------------------------------------ecCCc
Confidence 01125
Q ss_pred CceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEe-ecCCcEEEEEccCCC
Q psy14906 414 KPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISG-GNDQTVKVWHFKQTG 492 (583)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~ 492 (583)
.+.++.+.|++..+++++.++.+.+|+........... ...|...+..+.+.+++..++.+ ..|+.+.+|+....
T Consensus 286 ~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~- 361 (466)
T COG2319 286 SVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLT---LKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTG- 361 (466)
T ss_pred cEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEee---ecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCC-
Confidence 78889999988888888888889999988777666552 13677789999994332455555 68899999999887
Q ss_pred CCceEEeeccCCeeeEEeccCCcEEEE-EeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEE
Q psy14906 493 KPPLRSIKLDNGISFFRTHQESSMLAV-CLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571 (583)
Q Consensus 493 ~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw 571 (583)
...........+..+.+++ ...+.. +..++.+.+|+............+...+....+++++..+++++.++.+++|
T Consensus 362 -~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (466)
T COG2319 362 -KPLKTLEGHSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLW 439 (466)
T ss_pred -ceeEEecCCceEEEEEECC-CCCEEEEecCCCceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEEEE
Confidence 4333333333488889988 544443 6889999999999988877766554789999999999999999999999999
Q ss_pred eCCC
Q psy14906 572 DIPS 575 (583)
Q Consensus 572 ~~~~ 575 (583)
+..+
T Consensus 440 ~~~~ 443 (466)
T COG2319 440 DLKT 443 (466)
T ss_pred eccC
Confidence 9876
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-24 Score=191.72 Aligned_cols=220 Identities=17% Similarity=0.217 Sum_probs=174.5
Q ss_pred EEEEeeCCeEEEEecCCcEEEeecCCCCC--CeEEEEeeC--eEEEEE--cCCeEEEEeccce-----eeeeecccCccE
Q psy14906 46 LFVTCVGKAFHVYGCNHFKLLSVSPQHED--DITCLSSDF--FHIYTS--ANNIIYAWRRGID-----IVGTYKGHTSPV 114 (583)
Q Consensus 46 ~i~~~~~~~i~v~d~~~~~~~~~~~~h~~--~v~~~~~~~--~~~~~~--~~~~i~vw~~~~~-----~~~~~~~h~~~v 114 (583)
+.+.+.+..+++||....+....+-.|.. .+..+.+.. .+++++ .|..+++|.-.++ .+..+.+. .-
T Consensus 5 l~~aS~gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd--~~ 82 (673)
T KOG4378|consen 5 LHVASTGDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD--NA 82 (673)
T ss_pred eeeeccCCceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccc--hH
Confidence 56677899999999987666654443322 366666633 355554 6779999986554 22223333 33
Q ss_pred EEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEcc
Q psy14906 115 HLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNIL 192 (583)
Q Consensus 115 ~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~ 192 (583)
.|+ .....|+++|+..+.|+|||++...+.+.++ +|...|+++.++....+||+++..|.|.|..+.
T Consensus 83 ~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lk-----------dh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~ 151 (673)
T KOG4378|consen 83 FCVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLK-----------DHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTK 151 (673)
T ss_pred HHHhhhhcceeeeccCcCceeeehhhHHHHHhhhcc-----------CCcceeEEEEecCCcceeEEeccCCcEEEEecc
Confidence 343 4455899999999999999999777777777 999999999999999999999999999999999
Q ss_pred CCceeEEEeccC-CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCC-CEEEEEeCCC
Q psy14906 193 TDESLMEFIQTW-GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNE-PLLVTSSPDN 270 (583)
Q Consensus 193 ~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~ 270 (583)
++.....|.... ..|.-+.|+|..+.+|.+++.+|.|.+||+....+...+...|..+...++|+|.. .+|++.+.|.
T Consensus 152 t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dk 231 (673)
T KOG4378|consen 152 TKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDK 231 (673)
T ss_pred cCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccc
Confidence 998888887653 45669999999998999999999999999998888888878899999999999864 5788889999
Q ss_pred eEEEEEcc
Q psy14906 271 TLKLWIFD 278 (583)
Q Consensus 271 ~i~~w~~~ 278 (583)
.|.+||..
T Consensus 232 ki~~yD~~ 239 (673)
T KOG4378|consen 232 KINIYDIR 239 (673)
T ss_pred eEEEeecc
Confidence 99999653
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.3e-27 Score=214.87 Aligned_cols=218 Identities=17% Similarity=0.323 Sum_probs=194.6
Q ss_pred cCCeEEEEeccceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEE
Q psy14906 90 ANNIIYAWRRGIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNV 167 (583)
Q Consensus 90 ~~~~i~vw~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 167 (583)
..-.+++||. +.+..|...|.++ -..++.+++|+.|-.+-+|.+.....+..+. +|..+|.+
T Consensus 12 ~~t~Lr~~~~-----~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~-----------~hespIeS 75 (825)
T KOG0267|consen 12 RATKLRVWDT-----REFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLT-----------GHESPIES 75 (825)
T ss_pred eeeccccccc-----hhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheee-----------ccCCccee
Confidence 4445667773 3455788888776 5677899999999999999998877777766 99999999
Q ss_pred EeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhcc
Q psy14906 168 LEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAH 247 (583)
Q Consensus 168 ~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 247 (583)
+.|+++..+|++|+.+|+|++||++..+.++++.+|...+..+.|+|-+. +.++|+.|+.+++||.+...+...+ .+|
T Consensus 76 l~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~-~~a~gStdtd~~iwD~Rk~Gc~~~~-~s~ 153 (825)
T KOG0267|consen 76 LTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGE-FFASGSTDTDLKIWDIRKKGCSHTY-KSH 153 (825)
T ss_pred eecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceE-EeccccccccceehhhhccCceeee-cCC
Confidence 99999999999999999999999999999999999999999999999999 7899999999999999988899988 789
Q ss_pred ccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccc
Q psy14906 248 RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 248 ~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
...+..+.|+|+|++++.++.|.++++||+. .++.+..+..|...+..+.|+| ..-.+++|+.|+++++||+++.
T Consensus 154 ~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~----agk~~~ef~~~e~~v~sle~hp-~e~Lla~Gs~d~tv~f~dletf 228 (825)
T KOG0267|consen 154 TRVVDVLRLSPDGRWVASGGEDNTVKIWDLT----AGKLSKEFKSHEGKVQSLEFHP-LEVLLAPGSSDRTVRFWDLETF 228 (825)
T ss_pred cceeEEEeecCCCceeeccCCcceeeeeccc----ccccccccccccccccccccCc-hhhhhccCCCCceeeeecccee
Confidence 9999999999999999999999999999664 5788889999999999999997 5778899999999999999876
Q ss_pred ccc
Q psy14906 328 TSN 330 (583)
Q Consensus 328 ~~~ 330 (583)
..+
T Consensus 229 e~I 231 (825)
T KOG0267|consen 229 EVI 231 (825)
T ss_pred EEe
Confidence 544
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.5e-24 Score=176.00 Aligned_cols=289 Identities=13% Similarity=0.066 Sum_probs=215.0
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc
Q psy14906 116 LILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE 195 (583)
Q Consensus 116 ~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~ 195 (583)
.+++.|.+||+|+.||.|.|||+.+...-..+. +|-.+|.+++||+||+.|++++.|..|.+||+..|.
T Consensus 30 ~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~ls-----------aH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs 98 (405)
T KOG1273|consen 30 QFSRWGDYLAVGCANGRVVIYDFDTFRIARMLS-----------AHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGS 98 (405)
T ss_pred EeccCcceeeeeccCCcEEEEEccccchhhhhh-----------ccccceeEEEecCCCCEeeeecCCceeEEEeccCCC
Confidence 359999999999999999999999987666666 999999999999999999999999999999999999
Q ss_pred eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe--ehhhhhhcc-ccceEEEEEecCCCEEEEEeCCCeE
Q psy14906 196 SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ--VENQIKKAH-RKVVTGAHFLYNEPLLVTSSPDNTL 272 (583)
Q Consensus 196 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~~i 272 (583)
++++++.. .+|+.+.|+|......++.-.+..-.+-++..++ ++..-..+. .....+..|.+.|+++++|...|.+
T Consensus 99 ~l~rirf~-spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkl 177 (405)
T KOG1273|consen 99 PLKRIRFD-SPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKL 177 (405)
T ss_pred ceeEEEcc-CccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceE
Confidence 99999988 8999999999876555555445555555555422 111110011 1112234688999999999999999
Q ss_pred EEEEccCCCCCceeeEEeccCC-CCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhc
Q psy14906 273 KLWIFDKADGNGRLLRIREGHS-APPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEK 351 (583)
Q Consensus 273 ~~w~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (583)
.+++.+ +.+++..++-.. ..|..+.++. .++.|+.-+.|+.|+.|++..-.....-+....
T Consensus 178 lv~~a~----t~e~vas~rits~~~IK~I~~s~-~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~------------- 239 (405)
T KOG1273|consen 178 LVYDAE----TLECVASFRITSVQAIKQIIVSR-KGRFLIINTSDRVIRTYEISDIDDEGRDGEVEP------------- 239 (405)
T ss_pred EEEecc----hheeeeeeeechheeeeEEEEec-cCcEEEEecCCceEEEEehhhhcccCccCCcCh-------------
Confidence 999665 456666666555 6788899985 799999999999999999763211100000000
Q ss_pred cccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe
Q psy14906 352 MNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY 431 (583)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 431 (583)
........ ...+-.+++|+.+|.++++++
T Consensus 240 -------------------------------------------------~~K~qDvV--Nk~~Wk~ccfs~dgeYv~a~s 268 (405)
T KOG1273|consen 240 -------------------------------------------------EHKLQDVV--NKLQWKKCCFSGDGEYVCAGS 268 (405)
T ss_pred -------------------------------------------------hHHHHHHH--hhhhhhheeecCCccEEEecc
Confidence 00000000 003456889999999999887
Q ss_pred cC-ceEEEEEcccCccccccCCCCCCCcc-cCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 432 SS-GHVDRFNIQSGAHRGSYGHDNQPGHV-GGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 432 ~d-g~i~i~d~~~~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
.. ..++||....|.++..+ .+.. .....+.|+|-...+++. ..|.+++|.....
T Consensus 269 ~~aHaLYIWE~~~GsLVKIL-----hG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~~~ 324 (405)
T KOG1273|consen 269 ARAHALYIWEKSIGSLVKIL-----HGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVVQV 324 (405)
T ss_pred ccceeEEEEecCCcceeeee-----cCCchhheeecccccceeeeeec-cCCceEEEEeecc
Confidence 53 57999999999999988 5555 567789999988888888 6789999987654
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-24 Score=179.96 Aligned_cols=266 Identities=16% Similarity=0.220 Sum_probs=195.4
Q ss_pred cCCcceEEEeeCCC----CCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q psy14906 160 RWNSCVNVLEPSPV----VDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 160 ~~~~~i~~~~~s~~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 235 (583)
.+......++|+-| ..+||+|+.-|.|+|.|+.+++....+.+|...|+.+.|.|+.+.++++++.|..|++|+++
T Consensus 87 d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~ 166 (385)
T KOG1034|consen 87 DHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ 166 (385)
T ss_pred CCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEecc
Confidence 45667777777654 34788899999999999999999999999999999999999998899999999999999999
Q ss_pred CCeehhhhh--hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCC--------------Ccee----------eEE
Q psy14906 236 DRQVENQIK--KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG--------------NGRL----------LRI 289 (583)
Q Consensus 236 ~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~--------------~~~~----------~~~ 289 (583)
+..++..+- .+|.+.|.++.|+++|.+|++++.|.++++|+++.+.- ..+. ..+
T Consensus 167 ~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst 246 (385)
T KOG1034|consen 167 TDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFST 246 (385)
T ss_pred CCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccc
Confidence 999887652 57999999999999999999999999999998862210 0000 012
Q ss_pred eccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcc-ccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeec
Q psy14906 290 REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK-SETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGL 368 (583)
Q Consensus 290 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (583)
-.-|...|.|+.|. |+++++-+-++.|..|... -++....... +..+
T Consensus 247 ~diHrnyVDCvrw~---gd~ilSkscenaI~~w~pgkl~e~~~~vkp------------------------~es~----- 294 (385)
T KOG1034|consen 247 TDIHRNYVDCVRWF---GDFILSKSCENAIVCWKPGKLEESIHNVKP------------------------PESA----- 294 (385)
T ss_pred cccccchHHHHHHH---hhheeecccCceEEEEecchhhhhhhccCC------------------------Cccc-----
Confidence 23477788888886 5799999999999999873 1111111100 0000
Q ss_pred ccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcccc
Q psy14906 369 AREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRG 448 (583)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~ 448 (583)
...+.-+++.... ......+|+|-++.||.|.+.|.|++||+...+...
T Consensus 295 ---------------~Ti~~~~~~~~c~----------------iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~ 343 (385)
T KOG1034|consen 295 ---------------TTILGEFDYPMCD----------------IWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPK 343 (385)
T ss_pred ---------------eeeeeEeccCccc----------------eEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCcc
Confidence 0001111111100 112345667778999999999999999999776642
Q ss_pred ccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEcc
Q psy14906 449 SYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFK 489 (583)
Q Consensus 449 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 489 (583)
.- ..........|+..+|+.|+.+|+..++|++|.-||.-
T Consensus 344 ~t-tl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 344 CT-TLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred Cc-eEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 11 10002335679999999999999999999999999864
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.7e-23 Score=170.42 Aligned_cols=207 Identities=15% Similarity=0.264 Sum_probs=160.8
Q ss_pred cccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCc----EEEEeeccCCceEEecccCCcceEEEeeCC--CCCEEEE
Q psy14906 108 KGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEE----TYLELSFDNDTFKIMGKRWNSCVNVLEPSP--VVDIIGV 179 (583)
Q Consensus 108 ~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~ 179 (583)
.+|.+-|+++ .+.|+++|+++.|++|+|||..... +....+ .|.+.|..+.|.+ -|+.+|+
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wr-----------ah~~Si~rV~WAhPEfGqvvA~ 78 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWR-----------AHDGSIWRVVWAHPEFGQVVAT 78 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEE-----------ecCCcEEEEEecCccccceEEE
Confidence 4788889987 6789999999999999999975432 334444 8999999999975 5899999
Q ss_pred EecCCeEEEEEccC---------CceeEEEeccCCCeEEEEEecCCC-CEEEEEcCCCcEEEEeCCCC------eehhhh
Q psy14906 180 GLSNKKIILHNILT---------DESLMEFIQTWGPVTALSFRTDGP-PMMVSGSNTGHLTVWNLEDR------QVENQI 243 (583)
Q Consensus 180 ~~~d~~i~iw~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~-~~l~s~~~dg~i~vwd~~~~------~~~~~~ 243 (583)
++.|+++.||.-.. .....++......|+.+.|.|... ..|++++.||.+|||+..+. .+...+
T Consensus 79 cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei 158 (361)
T KOG2445|consen 79 CSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEI 158 (361)
T ss_pred EecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhh
Confidence 99999999998621 123445666778999999999632 26899999999999987643 233333
Q ss_pred h------hccccceEEEEEecC---CCEEEEEeCC-----CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCC--
Q psy14906 244 K------KAHRKVVTGAHFLYN---EPLLVTSSPD-----NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSS-- 307 (583)
Q Consensus 244 ~------~~~~~~v~~~~~~~~---~~~l~s~~~d-----~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-- 307 (583)
. ..+..+..|+.|+|. ..+|+.|+.+ +.+.||..+........+..+.+|..+|+.++|.|.-|
T Consensus 159 ~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~ 238 (361)
T KOG2445|consen 159 QNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRS 238 (361)
T ss_pred hhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCc
Confidence 1 135567789999875 4578887765 47999977665545666778889999999999999654
Q ss_pred -CEEEEeeCCCcEEEEEccc
Q psy14906 308 -DNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 308 -~~l~~~~~dg~i~iwd~~~ 326 (583)
.+|++++.|| |+||.+..
T Consensus 239 y~~lAvA~kDg-v~I~~v~~ 257 (361)
T KOG2445|consen 239 YHLLAVATKDG-VRIFKVKV 257 (361)
T ss_pred eeeEEEeecCc-EEEEEEee
Confidence 5789999999 99999865
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.1e-26 Score=207.66 Aligned_cols=257 Identities=18% Similarity=0.298 Sum_probs=223.1
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEE
Q psy14906 121 GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEF 200 (583)
Q Consensus 121 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 200 (583)
+.+++....+-.+++||.+... .|...+.++..-..++.+++|+.|..+-+|.+.....+..+
T Consensus 4 ~~~~m~~~~~t~Lr~~~~~~~~-----------------~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~ 66 (825)
T KOG0267|consen 4 MEFLMKTKRATKLRVWDTREFV-----------------AHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSL 66 (825)
T ss_pred ccccceeeeeeccccccchhhh-----------------hhhhhhceeeeeccceeeccCCCceeeccccccCCchhhee
Confidence 3455566667778888866421 67788888888777889999999999999999888888889
Q ss_pred eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCC
Q psy14906 201 IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA 280 (583)
Q Consensus 201 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~ 280 (583)
.+|..+|.++.|+++.. +|++|+.+|+|++||++..+.++++ .+|...+.++.|+|-+.++++|+.|..+++||+.
T Consensus 67 ~~hespIeSl~f~~~E~-LlaagsasgtiK~wDleeAk~vrtL-tgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~R-- 142 (825)
T KOG0267|consen 67 TGHESPIESLTFDTSER-LLAAGSASGTIKVWDLEEAKIVRTL-TGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIR-- 142 (825)
T ss_pred eccCCcceeeecCcchh-hhcccccCCceeeeehhhhhhhhhh-hccccCcceeeeccceEEeccccccccceehhhh--
Confidence 99999999999999988 9999999999999999999999999 8999999999999999999999999999999664
Q ss_pred CCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCc
Q psy14906 281 DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPP 360 (583)
Q Consensus 281 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (583)
...+...+.+|...+..+.|+| +|.+++.++.|.++++||+..++....+..
T Consensus 143 --k~Gc~~~~~s~~~vv~~l~lsP-~Gr~v~~g~ed~tvki~d~~agk~~~ef~~------------------------- 194 (825)
T KOG0267|consen 143 --KKGCSHTYKSHTRVVDVLRLSP-DGRWVASGGEDNTVKIWDLTAGKLSKEFKS------------------------- 194 (825)
T ss_pred --ccCceeeecCCcceeEEEeecC-CCceeeccCCcceeeeeccccccccccccc-------------------------
Confidence 4567788889999999999998 899999999999999999998887665521
Q ss_pred cceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEE
Q psy14906 361 VSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFN 440 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d 440 (583)
|...+.++.|+|..-+++.|+.|+.+++||
T Consensus 195 --------------------------------------------------~e~~v~sle~hp~e~Lla~Gs~d~tv~f~d 224 (825)
T KOG0267|consen 195 --------------------------------------------------HEGKVQSLEFHPLEVLLAPGSSDRTVRFWD 224 (825)
T ss_pred --------------------------------------------------ccccccccccCchhhhhccCCCCceeeeec
Confidence 125678888999999999999999999999
Q ss_pred cccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCC
Q psy14906 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ 481 (583)
Q Consensus 441 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg 481 (583)
+++.+.+... ......|.+.+|+|+++.+++|....
T Consensus 225 letfe~I~s~-----~~~~~~v~~~~fn~~~~~~~~G~q~s 260 (825)
T KOG0267|consen 225 LETFEVISSG-----KPETDGVRSLAFNPDGKIVLSGEQIS 260 (825)
T ss_pred cceeEEeecc-----CCccCCceeeeecCCceeeecCchhh
Confidence 9988888776 45688899999999999998887643
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.9e-23 Score=179.36 Aligned_cols=333 Identities=17% Similarity=0.207 Sum_probs=213.0
Q ss_pred CcceEEEeeCCCCC-EEEEEecCCeEEEEEccCCc---------eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEE
Q psy14906 162 NSCVNVLEPSPVVD-IIGVGLSNKKIILHNILTDE---------SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTV 231 (583)
Q Consensus 162 ~~~i~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v 231 (583)
..++..+.|.++.. .||+|+.|..|++|-+..++ .+..+..|...|+++.|+|+|+ +|++|+.+|.+.+
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~ge-lLASg~D~g~v~l 91 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGE-LLASGGDGGEVFL 91 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcC-eeeecCCCceEEE
Confidence 46888999998776 99999999999999987542 2344668989999999999999 9999999999999
Q ss_pred EeCC--------C-----C---eehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCC
Q psy14906 232 WNLE--------D-----R---QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA 295 (583)
Q Consensus 232 wd~~--------~-----~---~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~ 295 (583)
|... + . ...+.+ .+|...|..++|+|+++++++++.|+.+++||+. .+.....+..|..
T Consensus 92 Wk~~~~~~~~~d~e~~~~ke~w~v~k~l-r~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~----~G~l~~~~~dh~~ 166 (434)
T KOG1009|consen 92 WKQGDVRIFDADTEADLNKEKWVVKKVL-RGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVH----AGQLLAILDDHEH 166 (434)
T ss_pred EEecCcCCccccchhhhCccceEEEEEe-cccccchhhhhccCCCceeeeeeccceEEEEEec----cceeEeecccccc
Confidence 9876 2 1 122333 6899999999999999999999999999999876 6788999999999
Q ss_pred CCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccc
Q psy14906 296 PPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWN 375 (583)
Q Consensus 296 ~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (583)
.+..++|.| -++++++-+.|...+.+.+...+.++..........
T Consensus 167 yvqgvawDp-l~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~---------------------------------- 211 (434)
T KOG1009|consen 167 YVQGVAWDP-LNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAK---------------------------------- 211 (434)
T ss_pred ccceeecch-hhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeec----------------------------------
Confidence 999999998 688999999998777777766554443321000000
Q ss_pred cEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCc---cccccCC
Q psy14906 376 NIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGA---HRGSYGH 452 (583)
Q Consensus 376 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~ 452 (583)
..........+++.-++.+ .-...++|+|||.++++... . ++...+. ....+
T Consensus 212 --~~~~~e~~s~rLfhDeTlk----------------sFFrRlsfTPdG~llvtPag--~---~~~g~~~~~n~tYvf-- 266 (434)
T KOG1009|consen 212 --AFNEREGKSTRLFHDETLK----------------SFFRRLSFTPDGSLLVTPAG--L---FKVGGGVFRNTSYVF-- 266 (434)
T ss_pred --ccCCCCcceeeeeecCchh----------------hhhhhcccCCCCcEEEcccc--e---eeeCCceeeceeEee--
Confidence 0000001112222211111 23455677777777776532 1 1111100 00000
Q ss_pred CCCCCcccCeeEEEE-eCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEc
Q psy14906 453 DNQPGHVGGVRGVVS-DNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531 (583)
Q Consensus 453 ~~~~~h~~~v~~~~~-s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 531 (583)
..+.-.-.++.. +|....++.... -..|.+... ..-..+.--|-+-.+|+++.+ .|++||.
T Consensus 267 ---srk~l~rP~~~lp~~~k~~lavr~~---pVy~elrp~-----------~~~~~~~~lpyrlvfaiAt~~-svyvydt 328 (434)
T KOG1009|consen 267 ---SRKDLKRPAARLPSPKKPALAVRFS---PVYYELRPL-----------SSEKFLFVLPYRLVFAIATKN-SVYVYDT 328 (434)
T ss_pred ---ccccccCceeecCCCCcceEEEEee---eeEEEeccc-----------cccccccccccceEEEEeecc-eEEEecc
Confidence 000000000000 011111111110 111111110 000001112334455666554 8999999
Q ss_pred cccceEEeecc-cccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccc
Q psy14906 532 DTCTIIRKLSG-HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578 (583)
Q Consensus 532 ~~~~~~~~~~~-h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~ 578 (583)
++.+++..... |-..|++++|++||..|+..|.||..-+-.++..++
T Consensus 329 q~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~el 376 (434)
T KOG1009|consen 329 QTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWEL 376 (434)
T ss_pred ccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchhc
Confidence 99888876653 888999999999999999999999888777776554
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.6e-24 Score=176.37 Aligned_cols=351 Identities=12% Similarity=0.110 Sum_probs=250.2
Q ss_pred ccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEE-EecCCeEEEEE
Q psy14906 112 SPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV-GLSNKKIILHN 190 (583)
Q Consensus 112 ~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~d~~i~iw~ 190 (583)
++-.++||+|+|+|++++- .+.|-|..+-+.++.+. --..|..+.|..|..++++ ...++.|.+|+
T Consensus 11 ~~~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~------------cldki~yieW~ads~~ilC~~yk~~~vqvws 77 (447)
T KOG4497|consen 11 NPFCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFL------------CLDKIVYIEWKADSCHILCVAYKDPKVQVWS 77 (447)
T ss_pred CCceeECCCCCeeeeeeee-EEEEeccchhhHHHHHH------------HHHHhhheeeeccceeeeeeeeccceEEEEE
Confidence 4455689999999998854 88888988766544332 2356778899988876655 56788999999
Q ss_pred ccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCC
Q psy14906 191 ILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN 270 (583)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 270 (583)
+...+-...+......+.+++|+|||+.+|.+...+-.|.+|.+.+.+....- .....+..++|+|||++.+.++.--
T Consensus 78 l~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~--~pK~~~kg~~f~~dg~f~ai~sRrD 155 (447)
T KOG4497|consen 78 LVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLP--HPKTNVKGYAFHPDGQFCAILSRRD 155 (447)
T ss_pred eecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEec--ccccCceeEEECCCCceeeeeeccc
Confidence 99888888888888999999999999878888989999999999987654432 2344568899999999988876532
Q ss_pred eEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchh
Q psy14906 271 TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLE 350 (583)
Q Consensus 271 ~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (583)
.....++.. -.....++.+.-.+-..+.+.|+| ||..|+ +||-.-..
T Consensus 156 Ckdyv~i~~-c~~W~ll~~f~~dT~DltgieWsP-dg~~la---------Vwd~~Ley---------------------- 202 (447)
T KOG4497|consen 156 CKDYVQISS-CKAWILLKEFKLDTIDLTGIEWSP-DGNWLA---------VWDNVLEY---------------------- 202 (447)
T ss_pred HHHHHHHHh-hHHHHHHHhcCCCcccccCceECC-CCcEEE---------Eecchhhh----------------------
Confidence 211111110 012344455555566778899998 676555 45421110
Q ss_pred ccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEE
Q psy14906 351 KMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIG 430 (583)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 430 (583)
++..|+.. -.+..++|+|.++++++|
T Consensus 203 -----------------------------------kv~aYe~~-------------------lG~k~v~wsP~~qflavG 228 (447)
T KOG4497|consen 203 -----------------------------------KVYAYERG-------------------LGLKFVEWSPCNQFLAVG 228 (447)
T ss_pred -----------------------------------eeeeeeec-------------------cceeEEEeccccceEEee
Confidence 01111110 347788899999999999
Q ss_pred ecCceEEEEEcccCcccccc------------------------------------------------------------
Q psy14906 431 YSSGHVDRFNIQSGAHRGSY------------------------------------------------------------ 450 (583)
Q Consensus 431 ~~dg~i~i~d~~~~~~~~~~------------------------------------------------------------ 450 (583)
+.|+.+++.+--+-+....+
T Consensus 229 syD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~l 308 (447)
T KOG4497|consen 229 SYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKL 308 (447)
T ss_pred ccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecc
Confidence 99988887653221111000
Q ss_pred CC-CCCCCcccCeeEEEEeCCCcEEEEeec--CCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEE
Q psy14906 451 GH-DNQPGHVGGVRGVVSDNLNQIVISGGN--DQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVN 527 (583)
Q Consensus 451 ~~-~~~~~h~~~v~~~~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 527 (583)
.. .........+.-++|++|..+++|-.+ -..+.+||++.. ++...+....+|....|.|....|+++.....++
T Consensus 309 kp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l--~l~avLiQk~piraf~WdP~~prL~vctg~srLY 386 (447)
T KOG4497|consen 309 KPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNL--KLHAVLIQKHPIRAFEWDPGRPRLVVCTGKSRLY 386 (447)
T ss_pred cCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhh--hhhhhhhhccceeEEEeCCCCceEEEEcCCceEE
Confidence 00 000122345677899999999988754 356999999987 7777778888999999999999999999888999
Q ss_pred EEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCe
Q psy14906 528 IIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCT 567 (583)
Q Consensus 528 i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~ 567 (583)
+|.......+.. .+..-.|..+.|..+|..++-.+.|..
T Consensus 387 ~W~psg~~~V~v-P~~GF~i~~l~W~~~g~~i~l~~kDaf 425 (447)
T KOG4497|consen 387 FWAPSGPRVVGV-PKKGFNIQKLQWLQPGEFIVLCGKDAF 425 (447)
T ss_pred EEcCCCceEEec-CCCCceeeeEEecCCCcEEEEEcCCce
Confidence 999876555543 334467999999999999999999864
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-20 Score=185.52 Aligned_cols=367 Identities=23% Similarity=0.389 Sum_probs=279.7
Q ss_pred ecCCCCCCeEEEEee--C-eEEEEEcCCeEEEEeccce--eeeeecccCc-cEEEE---ccCCC-EEEEEeC-CCcEEEE
Q psy14906 68 VSPQHEDDITCLSSD--F-FHIYTSANNIIYAWRRGID--IVGTYKGHTS-PVHLI---LPFGP-HLISVDE-ESNVKVW 136 (583)
Q Consensus 68 ~~~~h~~~v~~~~~~--~-~~~~~~~~~~i~vw~~~~~--~~~~~~~h~~-~v~~i---s~~~~-~l~s~~~-dg~i~iw 136 (583)
.+..|...+.++.++ + .++.++.++.+.+|+.... ....+.++.. .+..+ ++++. +++..+. |+.+.+|
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 139 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW 139 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence 456789999998884 3 4555667999999997554 5677776443 45443 56676 5555444 8999999
Q ss_pred EcCC-CcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec-CCeEEEEEccCCceeEEEeccCCCeEEEEEec
Q psy14906 137 DIKA-EETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS-NKKIILHNILTDESLMEFIQTWGPVTALSFRT 214 (583)
Q Consensus 137 d~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~ 214 (583)
+... ......+. .|...|..++|+|+++.+++++. ++.+++|+...++.+..+.+|...|.+++|+|
T Consensus 140 ~~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 208 (466)
T COG2319 140 DLSTPGKLIRTLE-----------GHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSP 208 (466)
T ss_pred EecCCCeEEEEEe-----------cCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcC
Confidence 9998 77777776 89999999999999999988885 99999999998899999999999999999999
Q ss_pred CCCCEEEEEcCCCcEEEEeCCCCeehh-hhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC
Q psy14906 215 DGPPMMVSGSNTGHLTVWNLEDRQVEN-QIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH 293 (583)
Q Consensus 215 ~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~ 293 (583)
+++.++++++.|+.+++||...+.... .+ .+|.... ...|++++.++++++.|+.+++|++..... .+....+|
T Consensus 209 ~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~~~~ 283 (466)
T COG2319 209 DGGLLIASGSSDGTIRLWDLSTGKLLRSTL-SGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS---LLRTLSGH 283 (466)
T ss_pred CcceEEEEecCCCcEEEEECCCCcEEeeec-CCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCc---EEEEEecC
Confidence 987445555899999999988777776 45 6787775 448999998999999999999997754321 23333678
Q ss_pred CCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccc
Q psy14906 294 SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKD 373 (583)
Q Consensus 294 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (583)
...+.++.|.| ++..+++++.|+.+.+||...........
T Consensus 284 ~~~v~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--------------------------------------- 323 (466)
T COG2319 284 SSSVLSVAFSP-DGKLLASGSSDGTVRLWDLETGKLLSSLT--------------------------------------- 323 (466)
T ss_pred CccEEEEEECC-CCCEEEEeeCCCcEEEEEcCCCceEEEee---------------------------------------
Confidence 89999999998 67788888889889999877654433221
Q ss_pred cccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEE-ecCceEEEEEcccCccccccCC
Q psy14906 374 WNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIG-YSSGHVDRFNIQSGAHRGSYGH 452 (583)
Q Consensus 374 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~ 452 (583)
...+...+..+.+.+++..++.+ ..++.+.+|+..........
T Consensus 324 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-- 367 (466)
T COG2319 324 ----------------------------------LKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTL-- 367 (466)
T ss_pred ----------------------------------ecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEe--
Confidence 00011246677773333455555 67788999999887722222
Q ss_pred CCCCCcccCeeEEEEeCCCcEEEE-eecCCcEEEEEccCCCCCceEEeecc-CCeeeEEeccCCcEEEEEeCCceEEEEE
Q psy14906 453 DNQPGHVGGVRGVVSDNLNQIVIS-GGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSMLAVCLDDFTVNIID 530 (583)
Q Consensus 453 ~~~~~h~~~v~~~~~s~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~i~d 530 (583)
.....+..+.+.+ ...+.. +..++.+.+|+.... ......... ..+....+++++..++.++.++.+++|+
T Consensus 368 ----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (466)
T COG2319 368 ----EGHSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLSTG--SLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWD 440 (466)
T ss_pred ----cCCceEEEEEECC-CCCEEEEecCCCceEEEecccC--eeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEEEEe
Confidence 1222288999988 544444 688999999999987 666655555 7899999999999999999999999999
Q ss_pred ccc
Q psy14906 531 IDT 533 (583)
Q Consensus 531 ~~~ 533 (583)
..+
T Consensus 441 ~~~ 443 (466)
T COG2319 441 LKT 443 (466)
T ss_pred ccC
Confidence 987
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-21 Score=183.59 Aligned_cols=403 Identities=13% Similarity=0.168 Sum_probs=280.0
Q ss_pred EeeCeEEEEEcCCeEEEEec-cceeeeeecccCccEEEE----ccCC-CEEEEEeCCCcEEEEEcCCCcEEEEeeccCCc
Q psy14906 80 SSDFFHIYTSANNIIYAWRR-GIDIVGTYKGHTSPVHLI----LPFG-PHLISVDEESNVKVWDIKAEETYLELSFDNDT 153 (583)
Q Consensus 80 ~~~~~~~~~~~~~~i~vw~~-~~~~~~~~~~h~~~v~~i----s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 153 (583)
+.|.+.+.+..+..|.||.. .++++..+.+|..+++.+ ++.. .++.+++.||.|++||...++.+.++..
T Consensus 25 SnD~k~l~~~~~~~V~VyS~~Tg~~i~~l~~~~a~l~s~~~~~~~~~~~~~~~~sl~G~I~vwd~~~~~Llkt~~~---- 100 (792)
T KOG1963|consen 25 SNDAKFLFLCTGNFVKVYSTATGECITSLEDHTAPLTSVIVLPSSENANYLIVCSLDGTIRVWDWSDGELLKTFDN---- 100 (792)
T ss_pred ccCCcEEEEeeCCEEEEEecchHhhhhhcccccCccceeeecCCCccceEEEEEecCccEEEecCCCcEEEEEEec----
Confidence 34789999999999999995 678899999999999986 2222 6888999999999999999999988863
Q ss_pred eEEecccCCcceEEEeeCC---CCCEEE-EEecCCeE-EEEEccCCceeEE-------------EeccCCCeEEEEEecC
Q psy14906 154 FKIMGKRWNSCVNVLEPSP---VVDIIG-VGLSNKKI-ILHNILTDESLME-------------FIQTWGPVTALSFRTD 215 (583)
Q Consensus 154 ~~~~~~~~~~~i~~~~~s~---~~~~l~-~~~~d~~i-~iw~~~~~~~~~~-------------~~~~~~~v~~~~~~~~ 215 (583)
..++..+.+.| +-..++ ....+..+ .....+..+.... +..+ ..-.++.+++.
T Consensus 101 --------~~~v~~~~~~~~~a~~s~~~~~s~~~~~~~~~~s~~~~~q~~~~~~~t~~~~~~d~~~~~-~~~~~I~~~~~ 171 (792)
T KOG1963|consen 101 --------NLPVHALVYKPAQADISANVYVSVEDYSILTTFSKKLSKQSSRFVLATFDSAKGDFLKEH-QEPKSIVDNNS 171 (792)
T ss_pred --------CCceeEEEechhHhCccceeEeecccceeeeecccccccceeeeEeeeccccchhhhhhh-cCCccEEEcCC
Confidence 23333443322 111222 11122111 1011111111111 1122 12467888888
Q ss_pred CCCEEEEEcCCCcEEEEeCCCCe---ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEecc
Q psy14906 216 GPPMMVSGSNTGHLTVWNLEDRQ---VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREG 292 (583)
Q Consensus 216 ~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~ 292 (583)
|. +.....+..+.+|+...+. ..+.....|.-.+++.+++|++++++++..||.|.+|.=-...........+.-
T Consensus 172 ge--~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHW 249 (792)
T KOG1963|consen 172 GE--FKGIVHMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHW 249 (792)
T ss_pred ce--EEEEEEeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEe
Confidence 87 4444446678999987643 122222457778999999999999999999999999952221234455677888
Q ss_pred CCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccccc
Q psy14906 293 HSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREK 372 (583)
Q Consensus 293 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (583)
|...|.+++|++ +|.+|++|+.++.+.+|.+.+++ .+-++.
T Consensus 250 H~~~V~~L~fS~-~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPR------------------------------------- 290 (792)
T KOG1963|consen 250 HHDEVNSLSFSS-DGAYLLSGGREGVLVLWQLETGK-KQFLPR------------------------------------- 290 (792)
T ss_pred cccccceeEEec-CCceEeecccceEEEEEeecCCC-cccccc-------------------------------------
Confidence 999999999997 89999999999999999999876 221110
Q ss_pred ccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCC
Q psy14906 373 DWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGH 452 (583)
Q Consensus 373 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 452 (583)
-.++|..+.++||+.+.++...|+.|.+....+......+..
T Consensus 291 --------------------------------------Lgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsg 332 (792)
T KOG1963|consen 291 --------------------------------------LGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISG 332 (792)
T ss_pred --------------------------------------cCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccC
Confidence 116799999999999999999999999998866554433321
Q ss_pred CC------CCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeec------------cCCeeeEEeccCC
Q psy14906 453 DN------QPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL------------DNGISFFRTHQES 514 (583)
Q Consensus 453 ~~------~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------~~~v~~~~~s~~~ 514 (583)
.. -....+-.+.++++|.-+.++-.+..|.|.+||+-+. ..+..+.. .-.+++++.+..|
T Consensus 333 i~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td--~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~g 410 (792)
T KOG1963|consen 333 IKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTD--STIYKLQVCDENYSDGDVNIQVGITAVARSRFG 410 (792)
T ss_pred ccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEecccc--ceeeeEEEEeecccCCcceeEEeeeeehhhccc
Confidence 10 0123556778899997778888999999999999887 55544421 1257788888889
Q ss_pred cEEEEEeC----------CceEEEEEccccceE----E-eecccccceeeEEecC-CCc-EEEEEeCCCeEEEEeCCCc
Q psy14906 515 SMLAVCLD----------DFTVNIIDIDTCTII----R-KLSGHMGQLTDADFSP-DSR-WLITASMDCTIRVWDIPSS 576 (583)
Q Consensus 515 ~~l~~~~~----------dg~i~i~d~~~~~~~----~-~~~~h~~~v~~l~~s~-d~~-~l~s~~~d~~i~vw~~~~~ 576 (583)
.++++.-. .-.+++|-......- . ....|...+...+|.+ ... ..++++.||.+++|-+.+.
T Consensus 411 s~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~ 489 (792)
T KOG1963|consen 411 SWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDD 489 (792)
T ss_pred eEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecc
Confidence 99998632 236788976544322 2 2335777666666644 333 7899999999999998543
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=182.99 Aligned_cols=270 Identities=17% Similarity=0.255 Sum_probs=211.1
Q ss_pred eCCCCeehhhhhhccccceEEEEEecCCC--EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEE
Q psy14906 233 NLEDRQVENQIKKAHRKVVTGAHFLYNEP--LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNI 310 (583)
Q Consensus 233 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 310 (583)
|+.+-.....+ ..+...|++++|+|..+ ++++|+.-|.|-+||++.......-+..+..|..+|.++.|+|.+..++
T Consensus 172 ~l~~~~~~~v~-kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i 250 (498)
T KOG4328|consen 172 DLDDYRILNVA-KVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQI 250 (498)
T ss_pred ccccceeccee-EecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhhe
Confidence 34444444445 67889999999999764 7888989999999999755445666777889999999999999999999
Q ss_pred EEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEe
Q psy14906 311 LSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLW 390 (583)
Q Consensus 311 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 390 (583)
++.+.||+|++-|+++......+...
T Consensus 251 ~ssSyDGtiR~~D~~~~i~e~v~s~~------------------------------------------------------ 276 (498)
T KOG4328|consen 251 YSSSYDGTIRLQDFEGNISEEVLSLD------------------------------------------------------ 276 (498)
T ss_pred eeeccCceeeeeeecchhhHHHhhcC------------------------------------------------------
Confidence 99999999999999876532221100
Q ss_pred ecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcc-ccccCCCCCCCcccCeeEEEEeC
Q psy14906 391 SFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH-RGSYGHDNQPGHVGGVRGVVSDN 469 (583)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~h~~~v~~~~~s~ 469 (583)
.....+..+.|+.+...++.+..=|...+||++++.. ...+ .-|...|+.++++|
T Consensus 277 -------------------~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~-----~lh~kKI~sv~~NP 332 (498)
T KOG4328|consen 277 -------------------TDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENL-----RLHKKKITSVALNP 332 (498)
T ss_pred -------------------ccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhh-----hhhhcccceeecCC
Confidence 0003456677888888888888878999999998765 3344 67888999999999
Q ss_pred CC-cEEEEeecCCcEEEEEccCCCCC---ceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEcc----ccceEEeec
Q psy14906 470 LN-QIVISGGNDQTVKVWHFKQTGKP---PLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID----TCTIIRKLS 541 (583)
Q Consensus 470 ~~-~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~----~~~~~~~~~ 541 (583)
.. .+|+|++.|++.+|||++....+ .+..+.|...|.+..|||++-.|++.+.|..|+|||.. ...+...+.
T Consensus 333 ~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~ 412 (498)
T KOG4328|consen 333 VCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIP 412 (498)
T ss_pred CCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceee
Confidence 66 47899999999999999875333 26677888899999999999889999999999999983 334444443
Q ss_pred cccc------ceeeEEecCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 542 GHMG------QLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 542 ~h~~------~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
|.. ......|.||..++++|-.-..|-|+|-..++++..|
T Consensus 413 -Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el 458 (498)
T KOG4328|consen 413 -HNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCEL 458 (498)
T ss_pred -ccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeec
Confidence 332 2345679999999999999999999999888866654
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.1e-23 Score=173.00 Aligned_cols=312 Identities=16% Similarity=0.199 Sum_probs=219.7
Q ss_pred cCCcceEEEeeCC-----CCCEEEEEecCCeEEEEEccCCceeEEEe-----ccCCCeEEEEEecC---CCCEEEEEcCC
Q psy14906 160 RWNSCVNVLEPSP-----VVDIIGVGLSNKKIILHNILTDESLMEFI-----QTWGPVTALSFRTD---GPPMMVSGSNT 226 (583)
Q Consensus 160 ~~~~~i~~~~~s~-----~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-----~~~~~v~~~~~~~~---~~~~l~s~~~d 226 (583)
.|..+|..++|++ +-+.+|+.+. ..+.+|.....-.++.++ .|......++|+-+ ++.++|.++.-
T Consensus 36 d~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~ 114 (385)
T KOG1034|consen 36 DHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYL 114 (385)
T ss_pred cCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecce
Confidence 7788999999985 2345555544 478899876443333332 35567788888754 34489999999
Q ss_pred CcEEEEeCCCCeehhhhhhccccceEEEEEecCC-CEEEEEeCCCeEEEEEccCCCCCceeeEEe---ccCCCCCeeEEE
Q psy14906 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNE-PLLVTSSPDNTLKLWIFDKADGNGRLLRIR---EGHSAPPNYIQF 302 (583)
Q Consensus 227 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~---~~~~~~v~~~~~ 302 (583)
|.|+|.|+.++++...+ .+|...|+.+.+.|+. +++++++.|.+|++|++. +..++..+ .+|...|.++.|
T Consensus 115 GvIrVid~~~~~~~~~~-~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~----~~~Cv~VfGG~egHrdeVLSvD~ 189 (385)
T KOG1034|consen 115 GVIRVIDVVSGQCSKNY-RGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQ----TDVCVAVFGGVEGHRDEVLSVDF 189 (385)
T ss_pred eEEEEEecchhhhccce-eccCccchhhhcCCCCCcEEEEecCCceEEEEecc----CCeEEEEecccccccCcEEEEEE
Confidence 99999999999999999 8999999999999986 689999999999999876 45666554 579999999999
Q ss_pred eeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEec
Q psy14906 303 YGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHT 382 (583)
Q Consensus 303 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (583)
++ ++.+|++++.|.++++|++...+....+..
T Consensus 190 ~~-~gd~i~ScGmDhslk~W~l~~~~f~~~lE~----------------------------------------------- 221 (385)
T KOG1034|consen 190 SL-DGDRIASCGMDHSLKLWRLNVKEFKNKLEL----------------------------------------------- 221 (385)
T ss_pred cC-CCCeeeccCCcceEEEEecChhHHhhhhhh-----------------------------------------------
Confidence 97 899999999999999999986543222210
Q ss_pred CCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCe
Q psy14906 383 GKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGV 462 (583)
Q Consensus 383 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v 462 (583)
+..|+|++...-.-+ -...+.+.. ....|...|
T Consensus 222 ----------------------------------s~~~~~~~t~~pfpt--~~~~fp~fs-----------t~diHrnyV 254 (385)
T KOG1034|consen 222 ----------------------------------SITYSPNKTTRPFPT--PKTHFPDFS-----------TTDIHRNYV 254 (385)
T ss_pred ----------------------------------hcccCCCCccCcCCc--ccccccccc-----------ccccccchH
Confidence 112222221100000 001111111 004688888
Q ss_pred eEEEEeCCCcEEEEeecCCcEEEEEccCCCC------------CceEEeecc-CCeeeE--EeccCCcEEEEEeCCceEE
Q psy14906 463 RGVVSDNLNQIVISGGNDQTVKVWHFKQTGK------------PPLRSIKLD-NGISFF--RTHQESSMLAVCLDDFTVN 527 (583)
Q Consensus 463 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~------------~~~~~~~~~-~~v~~~--~~s~~~~~l~~~~~dg~i~ 527 (583)
-|+.|- |+++++-+-++.|..|.....+. ..+..++.+ ..+.-+ +|.|-+++||.|...|.|+
T Consensus 255 DCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~ 332 (385)
T KOG1034|consen 255 DCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVY 332 (385)
T ss_pred HHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEE
Confidence 888884 57888888888899997722110 111222222 234444 5567788999999999999
Q ss_pred EEEccccceE--Eeecc--cccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 528 IIDIDTCTII--RKLSG--HMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 528 i~d~~~~~~~--~~~~~--h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
+||++..++. .++.. -...|...+||.|+.+|+..+.|++|.-||.-
T Consensus 333 vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 333 VWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred EEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 9999877653 22221 23569999999999999999999999999854
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.9e-23 Score=176.38 Aligned_cols=208 Identities=21% Similarity=0.277 Sum_probs=169.8
Q ss_pred ccCccEEEE--ccC--CCEEEEEeCCCcEEEEEcCCC----------------cEEEEeeccCCceEEecccCCcceEEE
Q psy14906 109 GHTSPVHLI--LPF--GPHLISVDEESNVKVWDIKAE----------------ETYLELSFDNDTFKIMGKRWNSCVNVL 168 (583)
Q Consensus 109 ~h~~~v~~i--s~~--~~~l~s~~~dg~i~iwd~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~i~~~ 168 (583)
+|.+.++.+ ++. ..+.|+-+..|.|+||++... +.+.++. +|...=..+
T Consensus 149 ~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~-----------ghk~EGy~L 217 (440)
T KOG0302|consen 149 PHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFN-----------GHKGEGYGL 217 (440)
T ss_pred ccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEec-----------ccCccceee
Confidence 577777766 444 456777788999999998641 2233333 888888999
Q ss_pred eeCCCC-CEEEEEecCCeEEEEEccCCcee---EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe-ehhhh
Q psy14906 169 EPSPVV-DIIGVGLSNKKIILHNILTDESL---MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ-VENQI 243 (583)
Q Consensus 169 ~~s~~~-~~l~~~~~d~~i~iw~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~ 243 (583)
.|||-. ..|++|.--+.|++|...+|.-. ..|.+|+..|..++|||..+.+|++|+.||+|+|||++.+. ....+
T Consensus 218 dWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~ 297 (440)
T KOG0302|consen 218 DWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVS 297 (440)
T ss_pred ecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeE
Confidence 999933 35778877889999999887533 23568999999999999988899999999999999999872 22223
Q ss_pred hhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEE
Q psy14906 244 KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323 (583)
Q Consensus 244 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd 323 (583)
.+.|.+.|+.+.|+.+..+||+|+.||+++|||+..-. .++++..++.|..+|+++.|+|.+...|++++.|.+|.+||
T Consensus 298 ~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~-~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWD 376 (440)
T KOG0302|consen 298 TKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFK-SGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWD 376 (440)
T ss_pred eeccCCceeeEEccCCcceeeecCCCceEEEEEhhhcc-CCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEE
Confidence 37899999999999998899999999999999887554 35788999999999999999998899999999999999999
Q ss_pred ccccc
Q psy14906 324 TKSET 328 (583)
Q Consensus 324 ~~~~~ 328 (583)
+....
T Consensus 377 lsvE~ 381 (440)
T KOG0302|consen 377 LSVEA 381 (440)
T ss_pred eeccC
Confidence 87543
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=169.87 Aligned_cols=306 Identities=21% Similarity=0.327 Sum_probs=211.4
Q ss_pred ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEE
Q psy14906 195 ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKL 274 (583)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~ 274 (583)
.+...++.|.+.|+++.|-.+++ |++|...|.|.+|++.+.+....+...+...|+.+.-.|+ ..+.+-+.|..+.+
T Consensus 5 dP~fvLRp~~~~v~s~~fqa~~r--L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~l 81 (323)
T KOG0322|consen 5 DPFFVLRPHSSSVTSVLFQANER--LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLIL 81 (323)
T ss_pred CCeeEeccccchheehhhccchh--hhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEE
Confidence 45566778889999999999885 8999999999999999998888884467889999999887 45788899999999
Q ss_pred EEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC-cEEEEEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 275 WIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS-TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 275 w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
|++... . ....|.-.++++.|.+. -+...+... ....++-+.....+...
T Consensus 82 w~ia~s----~---~i~i~Si~~nslgFCrf---Sl~~~~k~~eqll~yp~rgsde~h~~D------------------- 132 (323)
T KOG0322|consen 82 WTIAYS----A---FISIHSIVVNSLGFCRF---SLVKKPKNSEQLLEYPSRGSDETHKQD------------------- 132 (323)
T ss_pred EEccCc----c---eEEEeeeeccccccccc---eeccCCCcchhheecCCcccchhhhhc-------------------
Confidence 977531 1 12224445566666541 122222111 11111111110000000
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc-CCc--EEEEE
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH-CGN--FVLIG 430 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~--~l~~~ 430 (583)
......+++-+- ......+.+.+..+.. ++. ++++|
T Consensus 133 ---------------------------~g~~tqv~i~dd--------------~~~~Klgsvmc~~~~~~c~s~~lllaG 171 (323)
T KOG0322|consen 133 ---------------------------GGDTTQVQIADD--------------SERSKLGSVMCQDKDHACGSTFLLLAG 171 (323)
T ss_pred ---------------------------cCccceeEccCc--------------hhccccCceeeeeccccccceEEEEEe
Confidence 000000111000 0001114455555333 232 56789
Q ss_pred ecCceEEEEEcccCccccccCCC-----CCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCce--EEeec-c
Q psy14906 431 YSSGHVDRFNIQSGAHRGSYGHD-----NQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPL--RSIKL-D 502 (583)
Q Consensus 431 ~~dg~i~i~d~~~~~~~~~~~~~-----~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~-~ 502 (583)
.++|.+.+||+.++..+..++.. ....|..+|.++.|.+....=++++.+..+..|++......+. ..... +
T Consensus 172 yEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~~~e~~lkn 251 (323)
T KOG0322|consen 172 YESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQIRKEITLKN 251 (323)
T ss_pred ccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccccceEEecC
Confidence 99999999999988544333211 1157999999999988766677888888999998875421222 22222 3
Q ss_pred CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 503 NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 503 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
..+..+.+-||++.+|+++.|++|+||+.+++.++..++-|.+.|++++|+||...+|.++.|++|.+|++
T Consensus 252 pGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 252 PGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred CCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 46889999999999999999999999999999999999999999999999999999999999999999986
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.5e-23 Score=182.09 Aligned_cols=232 Identities=17% Similarity=0.241 Sum_probs=182.3
Q ss_pred eEEEEEcCCeEEEEeccc----eeee------------------eecccCccEEEEccCC---CEEEEEeCCCcEEEEEc
Q psy14906 84 FHIYTSANNIIYAWRRGI----DIVG------------------TYKGHTSPVHLILPFG---PHLISVDEESNVKVWDI 138 (583)
Q Consensus 84 ~~~~~~~~~~i~vw~~~~----~~~~------------------~~~~h~~~v~~is~~~---~~l~s~~~dg~i~iwd~ 138 (583)
..++|..+..|.|||+.- .+.. .-.+|+..|.+++.+. ..|||||.|.+|++||+
T Consensus 194 yvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~ 273 (463)
T KOG0270|consen 194 YVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDV 273 (463)
T ss_pred eEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEc
Confidence 355566899999999631 0001 1236888888886554 68999999999999999
Q ss_pred CCCcEEEEeeccCCceEEecccCCcceEEEeeCCC-CCEEEEEecCCeEEEEEccCCce-eEEEeccCCCeEEEEEecCC
Q psy14906 139 KAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV-VDIIGVGLSNKKIILHNILTDES-LMEFIQTWGPVTALSFRTDG 216 (583)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~~~v~~~~~~~~~ 216 (583)
.+|++..++. .|.+.|.+++|+|. ...|++|+.|+++.+.|.+.... -..++.. +.|..++|.|..
T Consensus 274 ~~g~p~~s~~-----------~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~-g~VEkv~w~~~s 341 (463)
T KOG0270|consen 274 DTGKPKSSIT-----------HHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFD-GEVEKVAWDPHS 341 (463)
T ss_pred CCCCcceehh-----------hcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEec-cceEEEEecCCC
Confidence 9999999997 89999999999984 67899999999999999984322 2233333 789999999998
Q ss_pred CCEEEEEcCCCcEEEEeCCCC-eehhhhhhccccceEEEEEecCC-CEEEEEeCCCeEEEEEccCCCCCceeeEEeccCC
Q psy14906 217 PPMMVSGSNTGHLTVWNLEDR-QVENQIKKAHRKVVTGAHFLYNE-PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294 (583)
Q Consensus 217 ~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~ 294 (583)
...++++..||+|+-+|+++. +++.++ ++|.++|.++++++.. .++++++.|+.+++|+++.... +.+....-.-
T Consensus 342 e~~f~~~tddG~v~~~D~R~~~~~vwt~-~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~--~~v~~~~~~~ 418 (463)
T KOG0270|consen 342 ENSFFVSTDDGTVYYFDIRNPGKPVWTL-KAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSP--KSVKEHSFKL 418 (463)
T ss_pred ceeEEEecCCceEEeeecCCCCCceeEE-EeccCCcceEEecCCCCcceeeccccceEEEEeecCCCC--cccccccccc
Confidence 888999999999999999875 888998 8999999999998764 4788999999999998875532 2222211112
Q ss_pred CCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccc
Q psy14906 295 APPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330 (583)
Q Consensus 295 ~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 330 (583)
+...|.++.|.....++.|+..+.+++||+.+....
T Consensus 419 ~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 419 GRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPV 454 (463)
T ss_pred cceeecccCCCcceEEEecCccceEEEeecccChhH
Confidence 335667777766778889999999999999876543
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-22 Score=170.91 Aligned_cols=291 Identities=16% Similarity=0.221 Sum_probs=203.8
Q ss_pred CEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCC--CCCEEEEEecCCeEEEEEccCCceeEE
Q psy14906 122 PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSP--VVDIIGVGLSNKKIILHNILTDESLME 199 (583)
Q Consensus 122 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~d~~i~iw~~~~~~~~~~ 199 (583)
..+|++...|.|+++|..+++.+..++ ++...++.++|.. ....+.+|+.||+|++||+++......
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk-----------~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~ 109 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFK-----------GPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESAR 109 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheec-----------CCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhh
Confidence 568888889999999999999999998 8888888999977 467889999999999999998765554
Q ss_pred E--eccC-CCeEEEEEecCCCCEEEEEcC----CCcEEEEeCCCCee-hhhhhhccccceEEEEEecCC-CEEEEEeCCC
Q psy14906 200 F--IQTW-GPVTALSFRTDGPPMMVSGSN----TGHLTVWNLEDRQV-ENQIKKAHRKVVTGAHFLYNE-PLLVTSSPDN 270 (583)
Q Consensus 200 ~--~~~~-~~v~~~~~~~~~~~~l~s~~~----dg~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~ 270 (583)
+ ..+. .+..+++..-.++ ++++|.. +-.|.+||++..+. +..+...|.+.|+++.|+|.. ++|++|+.||
T Consensus 110 ~~~~~~~~~~f~~ld~nck~~-ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDG 188 (376)
T KOG1188|consen 110 ISWTQQSGTPFICLDLNCKKN-IIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDG 188 (376)
T ss_pred eeccCCCCCcceEeeccCcCC-eEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccc
Confidence 4 3443 4566777665666 7777753 56799999998766 888878999999999999964 6899999999
Q ss_pred eEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchh
Q psy14906 271 TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLE 350 (583)
Q Consensus 271 ~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (583)
.+.+||+.....+. .+...-.|...|..+.|..+.-++|.+-+..++..+|+++.+.....+..+........+....
T Consensus 189 LvnlfD~~~d~EeD-aL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~- 266 (376)
T KOG1188|consen 189 LVNLFDTKKDNEED-ALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNC- 266 (376)
T ss_pred eEEeeecCCCcchh-hHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhh-
Confidence 99999886654333 3333344777899999996444679999999999999999887544432221100000000000
Q ss_pred ccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEE-
Q psy14906 351 KMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLI- 429 (583)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~- 429 (583)
..+.......+..+.++
T Consensus 267 --------------------------------------------------------------dY~I~~~~~~~~~~~~l~ 284 (376)
T KOG1188|consen 267 --------------------------------------------------------------DYVINEHSPGDKDTCALA 284 (376)
T ss_pred --------------------------------------------------------------hheeecccCCCcceEEEe
Confidence 11111111123334443
Q ss_pred EecCceEEEEEcc---cCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEcc
Q psy14906 430 GYSSGHVDRFNIQ---SGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFK 489 (583)
Q Consensus 430 ~~~dg~i~i~d~~---~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 489 (583)
|+.-|...++-+. ++........+ ..+|..-|+++.|...+.+++||++||.+.+|..+
T Consensus 285 g~~~n~~~~~~~~~~~s~~~~~~~a~l-~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~ 346 (376)
T KOG1188|consen 285 GTDSNKGTIFPLVDTSSGSLLTEPAIL-QGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVE 346 (376)
T ss_pred ccccCceeEEEeeecccccccCccccc-cCCcHHHHHHHhhhcccceeeccCCCceEEEEecC
Confidence 3334555555433 33322222111 13578889999999899999999999999999853
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.7e-22 Score=166.30 Aligned_cols=278 Identities=14% Similarity=0.159 Sum_probs=196.0
Q ss_pred cceEEEeeCCCCCEEEEEecCCeEEEEEccCC------------ceeEEEe-ccCCCeEEEEEe-------cCCCCEEEE
Q psy14906 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTD------------ESLMEFI-QTWGPVTALSFR-------TDGPPMMVS 222 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~------------~~~~~~~-~~~~~v~~~~~~-------~~~~~~l~s 222 (583)
.-...+.|+|||..|++-+.|..+.+|++... +....++ .....|...+|- |+.. ++++
T Consensus 50 nf~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~-l~a~ 128 (406)
T KOG2919|consen 50 NFLKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTN-LFAV 128 (406)
T ss_pred hhhccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccc-eeee
Confidence 44556899999999999999999999998521 1111122 122466777775 4555 8899
Q ss_pred EcCCCcEEEEeCCCCeehhhhh-hcccc---ceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEec----cCC
Q psy14906 223 GSNTGHLTVWNLEDRQVENQIK-KAHRK---VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE----GHS 294 (583)
Q Consensus 223 ~~~dg~i~vwd~~~~~~~~~~~-~~~~~---~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~----~~~ 294 (583)
.+.+.-|++||.-+|++..++. -.|.+ ...+++|+|||.+|++| ..+.|++||+..+........++. +..
T Consensus 129 ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~ 207 (406)
T KOG2919|consen 129 SSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQK 207 (406)
T ss_pred ccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-ccceEEEeeccCCCCCCcchhhhhccccccc
Confidence 9999999999999999887762 12333 34689999999999876 578899997643322211111111 112
Q ss_pred CCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccccccc
Q psy14906 295 APPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDW 374 (583)
Q Consensus 295 ~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (583)
+-+.+++|+|.+..
T Consensus 208 giisc~a~sP~~~~------------------------------------------------------------------ 221 (406)
T KOG2919|consen 208 GIISCFAFSPMDSK------------------------------------------------------------------ 221 (406)
T ss_pred ceeeeeeccCCCCc------------------------------------------------------------------
Confidence 23334444443333
Q ss_pred ccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCC
Q psy14906 375 NNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDN 454 (583)
Q Consensus 375 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 454 (583)
.+++|+....+-||.-..+.++..+
T Consensus 222 ---------------------------------------------------~~a~gsY~q~~giy~~~~~~pl~ll---- 246 (406)
T KOG2919|consen 222 ---------------------------------------------------TLAVGSYGQRVGIYNDDGRRPLQLL---- 246 (406)
T ss_pred ---------------------------------------------------ceeeecccceeeeEecCCCCceeee----
Confidence 5555555555555555556666666
Q ss_pred CCCcccCeeEEEEeCCCcEEEEeec-CCcEEEEEccCCCCCceEEee-ccC---CeeeEEeccCCcEEEEEeCCceEEEE
Q psy14906 455 QPGHVGGVRGVVSDNLNQIVISGGN-DQTVKVWHFKQTGKPPLRSIK-LDN---GISFFRTHQESSMLAVCLDDFTVNII 529 (583)
Q Consensus 455 ~~~h~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~-~~~---~v~~~~~s~~~~~l~~~~~dg~i~i~ 529 (583)
.+|.+.|+.+.|.++|+.|++|+. |-.|..||++... .++..+. +.. .-.-....|++++||+|+.||.|++|
T Consensus 247 -ggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~-~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vw 324 (406)
T KOG2919|consen 247 -GGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSR-DPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVW 324 (406)
T ss_pred -cccCCCeeeEEeccCcCeecccccCCCeEEEEeehhcc-chhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEE
Confidence 699999999999999999999874 6789999998763 3333332 222 22334567899999999999999999
Q ss_pred Eccc-cceEEeecccccceeeEEecCCCcEEEEEeCC
Q psy14906 530 DIDT-CTIIRKLSGHMGQLTDADFSPDSRWLITASMD 565 (583)
Q Consensus 530 d~~~-~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d 565 (583)
|++. +..+..+..|+..++.++++|--.++|+++..
T Consensus 325 dlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGq 361 (406)
T KOG2919|consen 325 DLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQ 361 (406)
T ss_pred ecCCCCCcccccccccccccceecCcccceeeeccCc
Confidence 9998 77788888899999999999998888888754
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.3e-21 Score=170.85 Aligned_cols=254 Identities=12% Similarity=0.156 Sum_probs=193.8
Q ss_pred EEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCe-EEEEe----------eCeEEEEEcCCeEEEEecccee
Q psy14906 35 VARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDI-TCLSS----------DFFHIYTSANNIIYAWRRGIDI 103 (583)
Q Consensus 35 ~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v-~~~~~----------~~~~~~~~~~~~i~vw~~~~~~ 103 (583)
++.|+ +++-.+..+.|+.+.+|+--+...+....-.++-| +.+-+ ...++.++.||.+.+-+..++.
T Consensus 19 ~v~w~--~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il~k~~rV 96 (737)
T KOG1524|consen 19 CVDWS--SNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVILNKSARV 96 (737)
T ss_pred eeccc--ccceEEEeccCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEecccchh
Confidence 55664 44555667788888777644433322221111111 11111 2258899999999999999999
Q ss_pred eeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe
Q psy14906 104 VGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL 181 (583)
Q Consensus 104 ~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 181 (583)
.+...+|.+.+.+= +|||.-|+++++||.|++|. ++|....++. ....+|.|++|.|+.+.++.+.
T Consensus 97 E~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~-----------Q~~~~v~c~~W~p~S~~vl~c~ 164 (737)
T KOG1524|consen 97 ERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVV-----------QNEESIRCARWAPNSNSIVFCQ 164 (737)
T ss_pred hhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHh-----------hcCceeEEEEECCCCCceEEec
Confidence 99999999999885 99999999999999999999 4455544554 5678999999999999888764
Q ss_pred cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCC
Q psy14906 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEP 261 (583)
Q Consensus 182 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 261 (583)
. +.+.|=.+.....+...+.|.+-|.++.|++..+ ++++|+.|-..++||.. |+.+..- ..|..+|++++|.|+ +
T Consensus 165 g-~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~-lI~sgGED~kfKvWD~~-G~~Lf~S-~~~ey~ITSva~npd-~ 239 (737)
T KOG1524|consen 165 G-GHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSN-IIASGGEDFRFKIWDAQ-GANLFTS-AAEEYAITSVAFNPE-K 239 (737)
T ss_pred C-CeEEEeecccccceeEEeccCcEEEEeecCcccc-ceeecCCceeEEeeccc-CcccccC-Chhccceeeeeeccc-c
Confidence 4 5788888888888888999999999999999998 99999999999999987 5556655 589999999999999 5
Q ss_pred EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEc
Q psy14906 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324 (583)
Q Consensus 262 ~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 324 (583)
.++.++. +++++ -....+.|..++|++ ||..++.|+..|.+.+--.
T Consensus 240 ~~~v~S~-nt~R~---------------~~p~~GSifnlsWS~-DGTQ~a~gt~~G~v~~A~~ 285 (737)
T KOG1524|consen 240 DYLLWSY-NTARF---------------SSPRVGSIFNLSWSA-DGTQATCGTSTGQLIVAYA 285 (737)
T ss_pred ceeeeee-eeeee---------------cCCCccceEEEEEcC-CCceeeccccCceEEEeee
Confidence 5665553 33442 122456789999997 8999999999998776443
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.2e-22 Score=176.51 Aligned_cols=204 Identities=13% Similarity=0.187 Sum_probs=162.0
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEE---EEee-------ccCCceEEecccCCcceEEEeeCCC-CCEEEEEecCCeEEEE
Q psy14906 121 GPHLISVDEESNVKVWDIKAEETY---LELS-------FDNDTFKIMGKRWNSCVNVLEPSPV-VDIIGVGLSNKKIILH 189 (583)
Q Consensus 121 ~~~l~s~~~dg~i~iwd~~~~~~~---~~~~-------~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~iw 189 (583)
|+|+|.|+.|..|.|||+.-...+ .++. -........+.+|...|..++|+.. .+.||+|+.|.+|++|
T Consensus 192 gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lW 271 (463)
T KOG0270|consen 192 GNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLW 271 (463)
T ss_pred cceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEE
Confidence 579999999999999998642111 1110 0000001111378889999999875 4588999999999999
Q ss_pred EccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCC-CEEEEEeC
Q psy14906 190 NILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNE-PLLVTSSP 268 (583)
Q Consensus 190 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~ 268 (583)
|+.++++...+..|.+.|.+++|+|....+|++|+.|++|.+.|.+........ -...+.|-.++|.|.. ..++++..
T Consensus 272 D~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~-wk~~g~VEkv~w~~~se~~f~~~td 350 (463)
T KOG0270|consen 272 DVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKE-WKFDGEVEKVAWDPHSENSFFVSTD 350 (463)
T ss_pred EcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCce-EEeccceEEEEecCCCceeEEEecC
Confidence 999999999999999999999999998889999999999999999853222222 2346789999999865 46777788
Q ss_pred CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccc
Q psy14906 269 DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328 (583)
Q Consensus 269 d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 328 (583)
||+++-+|++. .++++.++..|.++|.++++++....++++++.|+.+++|++....
T Consensus 351 dG~v~~~D~R~---~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~ 407 (463)
T KOG0270|consen 351 DGTVYYFDIRN---PGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDS 407 (463)
T ss_pred CceEEeeecCC---CCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCC
Confidence 99999997654 4588999999999999999998778899999999999999987543
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.7e-22 Score=167.03 Aligned_cols=277 Identities=16% Similarity=0.221 Sum_probs=201.8
Q ss_pred CEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecC-CCCEEEEEcCCCcEEEEeCCCCeehhhhh-hccc-cce
Q psy14906 175 DIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTD-GPPMMVSGSNTGHLTVWNLEDRQVENQIK-KAHR-KVV 251 (583)
Q Consensus 175 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~-~~v 251 (583)
..+|++..+|.|++||..+++.+..++++...++.+.|..+ +...+.+++.||+|++||++.......+. .++. .+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 57899999999999999999999999999999999999875 55589999999999999999876554442 3343 466
Q ss_pred EEEEEecCCCEEEEEe----CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccc
Q psy14906 252 TGAHFLYNEPLLVTSS----PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 252 ~~~~~~~~~~~l~s~~----~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
.+++..-.++.+++|. .+-.+.+||+.... ...-.....|...|+++.|+|.+.++|++|+.||.+.+||+...
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~q--q~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQ--QLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD 198 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEecccc--chhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence 6777666778888775 36789999776432 11233456799999999999999999999999999999998653
Q ss_pred ccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccc
Q psy14906 328 TSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERC 407 (583)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 407 (583)
..
T Consensus 199 ~E------------------------------------------------------------------------------ 200 (376)
T KOG1188|consen 199 NE------------------------------------------------------------------------------ 200 (376)
T ss_pred cc------------------------------------------------------------------------------
Confidence 11
Q ss_pred cccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC-cEEEEeecCCcEEEE
Q psy14906 408 KQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN-QIVISGGNDQTVKVW 486 (583)
Q Consensus 408 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iw 486 (583)
...+... -.|...|.++.|..++ +.+.+-+...+..+|
T Consensus 201 -----------------------------------eDaL~~v------iN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ 239 (376)
T KOG1188|consen 201 -----------------------------------EDALLHV------INHGSSIHLIGWLSKKYKRIMCLTHMETFAIY 239 (376)
T ss_pred -----------------------------------hhhHHHh------hcccceeeeeeeecCCcceEEEEEccCceeEE
Confidence 0111111 2567778899998776 458888888999999
Q ss_pred EccCCCCCceEEeeccC-------------CeeeEEecc-CCcEEEEEeC-CceEEEEEcc---c---cceEEeecc-cc
Q psy14906 487 HFKQTGKPPLRSIKLDN-------------GISFFRTHQ-ESSMLAVCLD-DFTVNIIDID---T---CTIIRKLSG-HM 544 (583)
Q Consensus 487 d~~~~~~~~~~~~~~~~-------------~v~~~~~s~-~~~~l~~~~~-dg~i~i~d~~---~---~~~~~~~~~-h~ 544 (583)
+++.+ .....++.+. .+.. +.+| ++..++.++. -+...++-+. + ++.+..+.+ |.
T Consensus 240 ele~~--~~~~~~~~~~~~~~d~r~~~~~dY~I~-~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~ 316 (376)
T KOG1188|consen 240 ELEDG--SEETWLENPDVSADDLRKEDNCDYVIN-EHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHE 316 (376)
T ss_pred EccCC--ChhhcccCccchhhhHHhhhhhhheee-cccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcH
Confidence 99887 4332222210 0111 1223 3445555544 5555555443 2 344556666 77
Q ss_pred cceeeEEecCCCcEEEEEeCCCeEEEEeCCC
Q psy14906 545 GQLTDADFSPDSRWLITASMDCTIRVWDIPS 575 (583)
Q Consensus 545 ~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~ 575 (583)
.-|+++.|...+..+.||++||.+.+|..+.
T Consensus 317 eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~d 347 (376)
T KOG1188|consen 317 EIVRDILFDVKNDVLYTGGEDGLLQAWKVED 347 (376)
T ss_pred HHHHHHhhhcccceeeccCCCceEEEEecCC
Confidence 7899999998999999999999999999643
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.7e-22 Score=169.94 Aligned_cols=161 Identities=17% Similarity=0.249 Sum_probs=130.1
Q ss_pred CccEEEE--ccCCC-EEEEEeCCCcEEEEEcCCCcEEE---EeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCC
Q psy14906 111 TSPVHLI--LPFGP-HLISVDEESNVKVWDIKAEETYL---ELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNK 184 (583)
Q Consensus 111 ~~~v~~i--s~~~~-~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~ 184 (583)
..+|..+ .++.. .||||+.|..|++|-+..++.-. .+.+... -..|...|+++.|+|+|++||+|+.+|
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~-----Ls~H~~aVN~vRf~p~gelLASg~D~g 87 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSS-----LSRHTRAVNVVRFSPDGELLASGGDGG 87 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeec-----ccCCcceeEEEEEcCCcCeeeecCCCc
Confidence 3456555 44444 89999999999999987533111 1111000 028999999999999999999999999
Q ss_pred eEEEEEcc--------C--------CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccc
Q psy14906 185 KIILHNIL--------T--------DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHR 248 (583)
Q Consensus 185 ~i~iw~~~--------~--------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 248 (583)
.|.+|-.. + ....+.+.+|...|..++|+|++. ++++++.|..+++||+..|+....+ ..|.
T Consensus 88 ~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~-~l~s~s~dns~~l~Dv~~G~l~~~~-~dh~ 165 (434)
T KOG1009|consen 88 EVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSN-FLVSGSVDNSVRLWDVHAGQLLAIL-DDHE 165 (434)
T ss_pred eEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCc-eeeeeeccceEEEEEeccceeEeec-cccc
Confidence 99999876 2 223455678999999999999999 8999999999999999999999999 8999
Q ss_pred cceEEEEEecCCCEEEEEeCCCeEEEEEcc
Q psy14906 249 KVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 249 ~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 278 (583)
..+..++|.|-++++++-+.|...+.+.+.
T Consensus 166 ~yvqgvawDpl~qyv~s~s~dr~~~~~~~~ 195 (434)
T KOG1009|consen 166 HYVQGVAWDPLNQYVASKSSDRHPEGFSAK 195 (434)
T ss_pred cccceeecchhhhhhhhhccCcccceeeee
Confidence 999999999999999999999877777543
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.2e-23 Score=200.39 Aligned_cols=291 Identities=14% Similarity=0.244 Sum_probs=223.2
Q ss_pred EEEEEecCCCCEEEEEc----------CCCcEEEEeCC--CCe----ehhhhhhccccceEEEEEecCCCE----EEEEe
Q psy14906 208 TALSFRTDGPPMMVSGS----------NTGHLTVWNLE--DRQ----VENQIKKAHRKVVTGAHFLYNEPL----LVTSS 267 (583)
Q Consensus 208 ~~~~~~~~~~~~l~s~~----------~dg~i~vwd~~--~~~----~~~~~~~~~~~~v~~~~~~~~~~~----l~s~~ 267 (583)
..++|+|++..++++|. .+.++.+|.+. +.+ .+..+ .-....+.++|.+.+.. |+.|.
T Consensus 10 a~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~--~s~~rF~kL~W~~~g~~~~GlIaGG~ 87 (1049)
T KOG0307|consen 10 ATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSL--QSSNRFNKLAWGSYGSHSHGLIAGGL 87 (1049)
T ss_pred ceEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccc--cccccceeeeecccCCCccceeeccc
Confidence 45688998875666553 34456666554 222 33333 33567889999987765 88899
Q ss_pred CCCeEEEEEccC--CCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhh
Q psy14906 268 PDNTLKLWIFDK--ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKR 345 (583)
Q Consensus 268 ~d~~i~~w~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 345 (583)
.||.|.+|+.+. .......+.....|.+.|..+.|++..++.|++|+.||.|.|||+...+.....+
T Consensus 88 edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~----------- 156 (1049)
T KOG0307|consen 88 EDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPG----------- 156 (1049)
T ss_pred cCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCC-----------
Confidence 999999997765 3445567778889999999999999777899999999999999998743322111
Q ss_pred hcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC-C
Q psy14906 346 KNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC-G 424 (583)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~ 424 (583)
.......|.+++|+.. .
T Consensus 157 --------------------------------------------------------------~~~~~~eI~~lsWNrkvq 174 (1049)
T KOG0307|consen 157 --------------------------------------------------------------SQAPPSEIKCLSWNRKVS 174 (1049)
T ss_pred --------------------------------------------------------------CCCCcccceEeccchhhh
Confidence 0001157899999875 5
Q ss_pred cEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc-EEEEeecCC---cEEEEEccCCCCCceEEe-
Q psy14906 425 NFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ-IVISGGNDQ---TVKVWHFKQTGKPPLRSI- 499 (583)
Q Consensus 425 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg---~i~iwd~~~~~~~~~~~~- 499 (583)
..|++++.+|.+.|||++..+.+..+... .....+..++|+|+.. .+++++.|. .|.+||++... .+++.+
T Consensus 175 hILAS~s~sg~~~iWDlr~~~pii~ls~~---~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~as-sP~k~~~ 250 (1049)
T KOG0307|consen 175 HILASGSPSGRAVIWDLRKKKPIIKLSDT---PGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFAS-SPLKILE 250 (1049)
T ss_pred HHhhccCCCCCceeccccCCCcccccccC---CCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccC-Cchhhhc
Confidence 67888999999999999998887777321 2224588999999873 555555443 59999998764 566666
Q ss_pred eccCCeeeEEeccCC-cEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCc-EEEEEeCCCeEEEEeCCCcc
Q psy14906 500 KLDNGISFFRTHQES-SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSR-WLITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 500 ~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~-~l~s~~~d~~i~vw~~~~~~ 577 (583)
.|..+|.++.|++.+ ++|++++.|++|.+|+.++++.+..+......+..+.|+|... .++.++-||.|.|+.+.++.
T Consensus 251 ~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 251 GHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred ccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 455799999999976 7999999999999999999999999998888999999999665 78889999999999997654
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-21 Score=162.14 Aligned_cols=405 Identities=11% Similarity=0.060 Sum_probs=252.9
Q ss_pred CCeEEEEeeCeEEEEEcCCeEEEEeccceeeeeecccCccEEEE--ccCCCEEE-EEeCCCcEEEEEcCCCcEEEEeecc
Q psy14906 74 DDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLI--LPFGPHLI-SVDEESNVKVWDIKAEETYLELSFD 150 (583)
Q Consensus 74 ~~v~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~i--s~~~~~l~-s~~~dg~i~iwd~~~~~~~~~~~~~ 150 (583)
++..+++++|++++...+-.+.|-|...-.+..+-.--+.|..+ +.|..+++ ....++.|.+|++...+-...+.
T Consensus 11 ~~~c~fSp~g~yiAs~~~yrlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckId-- 88 (447)
T KOG4497|consen 11 NPFCSFSPCGNYIASLSRYRLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKID-- 88 (447)
T ss_pred CCceeECCCCCeeeeeeeeEEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEec--
Confidence 34567888999999988888888886442222222223344444 56666555 45778999999999988888887
Q ss_pred CCceEEecccCCcceEEEeeCCCCCEEE-EEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCc-
Q psy14906 151 NDTFKIMGKRWNSCVNVLEPSPVVDIIG-VGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGH- 228 (583)
Q Consensus 151 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~- 228 (583)
....++.++.|||||+.|+ +...+-.|.+|.+.+.+... +...+..+..++|+|||+ +.+.+++-..
T Consensus 89 ---------eg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~-~~~pK~~~kg~~f~~dg~-f~ai~sRrDCk 157 (447)
T KOG4497|consen 89 ---------EGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYL-LPHPKTNVKGYAFHPDGQ-FCAILSRRDCK 157 (447)
T ss_pred ---------cCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEE-ecccccCceeEEECCCCc-eeeeeecccHH
Confidence 7788999999999997554 55668899999998765543 444456789999999999 5555554211
Q ss_pred --EEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC
Q psy14906 229 --LTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306 (583)
Q Consensus 229 --i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 306 (583)
+.+..-..-++++.+ .-.+-..+.+.|+|||+.|+.-..--.-+++ . . .-.-.+..++|+| .
T Consensus 158 dyv~i~~c~~W~ll~~f-~~dT~DltgieWsPdg~~laVwd~~Leykv~------------a-Y-e~~lG~k~v~wsP-~ 221 (447)
T KOG4497|consen 158 DYVQISSCKAWILLKEF-KLDTIDLTGIEWSPDGNWLAVWDNVLEYKVY------------A-Y-ERGLGLKFVEWSP-C 221 (447)
T ss_pred HHHHHHhhHHHHHHHhc-CCCcccccCceECCCCcEEEEecchhhheee------------e-e-eeccceeEEEecc-c
Confidence 222222222344445 3445577889999999888754321111111 1 0 1123578899998 7
Q ss_pred CCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCce
Q psy14906 307 SDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNK 386 (583)
Q Consensus 307 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (583)
+++|+.|+.|+.+++.+--+-+...++.+........... ..+.......-...++++.+.... .+.....
T Consensus 222 ~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~--~~ke~~~~~ql~~~cLsf~p~~~~-------a~~~~~s 292 (447)
T KOG4497|consen 222 NQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHL--LEKETFSIVQLLHHCLSFTPTDLE-------AHIWEES 292 (447)
T ss_pred cceEEeeccchhhhhhceeeeeehhhhccchhccCchhhh--hhhhhcchhhhcccccccCCCccc-------cCccccc
Confidence 9999999999999998876666555554332222111000 000000000000111111110000 0000001
Q ss_pred EEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC--ceEEEEEcccCccccccCCCCCCCcccCeeE
Q psy14906 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS--GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRG 464 (583)
Q Consensus 387 i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~ 464 (583)
-..|+...-........+..-...+...+.-++|++|..++++-..+ +.+.+||++..+....+ ....+|+.
T Consensus 293 e~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avL------iQk~pira 366 (447)
T KOG4497|consen 293 ETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVL------IQKHPIRA 366 (447)
T ss_pred hhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhh------hhccceeE
Confidence 11122111111111111111122223567889999999999987654 67999999987776665 45667999
Q ss_pred EEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCc
Q psy14906 465 VVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDF 524 (583)
Q Consensus 465 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 524 (583)
..|+|....|+.+.....+++|..... ..+......-.|..+.|.-+|..++..+.|.
T Consensus 367 f~WdP~~prL~vctg~srLY~W~psg~--~~V~vP~~GF~i~~l~W~~~g~~i~l~~kDa 424 (447)
T KOG4497|consen 367 FEWDPGRPRLVVCTGKSRLYFWAPSGP--RVVGVPKKGFNIQKLQWLQPGEFIVLCGKDA 424 (447)
T ss_pred EEeCCCCceEEEEcCCceEEEEcCCCc--eEEecCCCCceeeeEEecCCCcEEEEEcCCc
Confidence 999999988888887788999998875 5555555556899999999999999988885
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.7e-22 Score=167.82 Aligned_cols=161 Identities=15% Similarity=0.261 Sum_probs=133.2
Q ss_pred CCceEEEEccCC-cEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC-cEEEEeecCCcEEEEEccC
Q psy14906 413 SKPTCVYITHCG-NFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN-QIVISGGNDQTVKVWHFKQ 490 (583)
Q Consensus 413 ~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~ 490 (583)
..-..++|||-. ..|++|.--+.|++|...++.-...-. .+.+|...|..++|||.. ..|++|+.||+|+|||++.
T Consensus 212 ~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~--Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs 289 (440)
T KOG0302|consen 212 GEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQR--PFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRS 289 (440)
T ss_pred ccceeeecccccccccccCccccceEeeeeccCceeecCc--cccccccchhhhccCCccCceEEeeecCceEEEEEecC
Confidence 566789999943 347778778889999998865433221 226899999999999965 5899999999999999998
Q ss_pred CC-CCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccc---cceEEeecccccceeeEEecC-CCcEEEEEeCC
Q psy14906 491 TG-KPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT---CTIIRKLSGHMGQLTDADFSP-DSRWLITASMD 565 (583)
Q Consensus 491 ~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~h~~~v~~l~~s~-d~~~l~s~~~d 565 (583)
+. ..++..-.+.+.|+.+.|+.+..+||+|+.||+++|||+++ ++++..++-|..+|++|.|+| +...|++++.|
T Consensus 290 ~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D 369 (440)
T KOG0302|consen 290 GPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGED 369 (440)
T ss_pred CCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCC
Confidence 73 23455556778999999999988999999999999999964 578899999999999999999 45678888999
Q ss_pred CeEEEEeCCC
Q psy14906 566 CTIRVWDIPS 575 (583)
Q Consensus 566 ~~i~vw~~~~ 575 (583)
.+|.+||+.-
T Consensus 370 ~QitiWDlsv 379 (440)
T KOG0302|consen 370 NQITIWDLSV 379 (440)
T ss_pred CcEEEEEeec
Confidence 9999999864
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-20 Score=156.90 Aligned_cols=270 Identities=15% Similarity=0.263 Sum_probs=200.7
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCc------------EEEEeeccCCceEEecccCCcceEEEeeC-------CCCCEEE
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEE------------TYLELSFDNDTFKIMGKRWNSCVNVLEPS-------PVVDIIG 178 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~------------~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-------~~~~~l~ 178 (583)
||||..|++-+.|..+.+|++...- ...++++ .....|...+|- |+..++|
T Consensus 58 SPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~----------~eg~tvydy~wYs~M~s~qP~t~l~a 127 (406)
T KOG2919|consen 58 SPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRY----------QEGETVYDYCWYSRMKSDQPSTNLFA 127 (406)
T ss_pred CCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEe----------ccCCEEEEEEeeeccccCCCccceee
Confidence 9999999999999999999986411 1111211 224455555553 6788999
Q ss_pred EEecCCeEEEEEccCCceeEEEec--cCC---CeEEEEEecCCCCEEEEEcCCCcEEEEeC-CCCeeh---hhh---hhc
Q psy14906 179 VGLSNKKIILHNILTDESLMEFIQ--TWG---PVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQVE---NQI---KKA 246 (583)
Q Consensus 179 ~~~~d~~i~iw~~~~~~~~~~~~~--~~~---~v~~~~~~~~~~~~l~s~~~dg~i~vwd~-~~~~~~---~~~---~~~ 246 (583)
+.+.+.-|++||.-+|+....++. |.. ...+++|+|||. .|++|. ...|++||+ +.|... .++ +.+
T Consensus 128 ~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGe-qlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~g 205 (406)
T KOG2919|consen 128 VSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGE-QLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFG 205 (406)
T ss_pred eccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCC-eEeecc-cceEEEeeccCCCCCCcchhhhhccccc
Confidence 999999999999999999888763 323 346899999999 666665 678999999 444321 111 123
Q ss_pred cccceEEEEEecCCC-EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC-CCcEEEEEc
Q psy14906 247 HRKVVTGAHFLYNEP-LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFNT 324 (583)
Q Consensus 247 ~~~~v~~~~~~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd~ 324 (583)
..+-+.+++|+|-.. .++.++....+-|+.-+ ...++..+.+|.+.|+.+.|.+ +|+.|++|+. |-.|..||+
T Consensus 206 q~giisc~a~sP~~~~~~a~gsY~q~~giy~~~----~~~pl~llggh~gGvThL~~~e-dGn~lfsGaRk~dkIl~WDi 280 (406)
T KOG2919|consen 206 QKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDD----GRRPLQLLGGHGGGVTHLQWCE-DGNKLFSGARKDDKILCWDI 280 (406)
T ss_pred ccceeeeeeccCCCCcceeeecccceeeeEecC----CCCceeeecccCCCeeeEEecc-CcCeecccccCCCeEEEEee
Confidence 467789999999655 89999999988888655 5678888899999999999997 8999999986 778999999
Q ss_pred cccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeec
Q psy14906 325 KSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVP 404 (583)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 404 (583)
+..... +|.+....
T Consensus 281 R~~~~p----------------------------------------------------------v~~L~rhv-------- 294 (406)
T KOG2919|consen 281 RYSRDP----------------------------------------------------------VYALERHV-------- 294 (406)
T ss_pred hhccch----------------------------------------------------------hhhhhhhc--------
Confidence 864321 01000000
Q ss_pred ccccccCCCCceEEEEccCCcEEEEEecCceEEEEEccc-CccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecC
Q psy14906 405 ERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQS-GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGND 480 (583)
Q Consensus 405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 480 (583)
....+-.-+...|++++|++|+.+|.|++||+++ +.....+ ..|...++.++++|--.++++++..
T Consensus 295 -----~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~-----~~~sd~vNgvslnP~mpilatssGq 361 (406)
T KOG2919|consen 295 -----GDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVT-----GNYSDTVNGVSLNPIMPILATSSGQ 361 (406)
T ss_pred -----cCccceEEEecCCCCceeeccCCCccEEEEecCCCCCccccc-----ccccccccceecCcccceeeeccCc
Confidence 0002223455678999999999999999999998 6656666 6889999999999998888888764
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.1e-21 Score=156.56 Aligned_cols=266 Identities=15% Similarity=0.194 Sum_probs=203.4
Q ss_pred eCCeEEEEecCC--cEEE-eecCCCCCCeEEEEe---eCeEEEEEcC--------CeEEEEeccc----------eeeee
Q psy14906 51 VGKAFHVYGCNH--FKLL-SVSPQHEDDITCLSS---DFFHIYTSAN--------NIIYAWRRGI----------DIVGT 106 (583)
Q Consensus 51 ~~~~i~v~d~~~--~~~~-~~~~~h~~~v~~~~~---~~~~~~~~~~--------~~i~vw~~~~----------~~~~~ 106 (583)
.++.|.+.+.+. +.++ .++..|.+.|..++- +.+++++... -.+.||.+.. +++..
T Consensus 38 ~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~ 117 (370)
T KOG1007|consen 38 EDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVAS 117 (370)
T ss_pred CcceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhc
Confidence 467777666554 4444 456778999998885 5577766543 2688999632 23334
Q ss_pred ec-ccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcE-EEEeeccCCceEEecccCCcceEEEeeCC--CCCEEEEE
Q psy14906 107 YK-GHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEET-YLELSFDNDTFKIMGKRWNSCVNVLEPSP--VVDIIGVG 180 (583)
Q Consensus 107 ~~-~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~ 180 (583)
|. .+-+.|.|+ .|++..+|+.. |..|.+|+++.+.. +..+..... ..+....++-+|+| |++.+++.
T Consensus 118 Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s------~e~~~~ftsg~WspHHdgnqv~tt 190 (370)
T KOG1007|consen 118 LDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSES------AEMRHSFTSGAWSPHHDGNQVATT 190 (370)
T ss_pred CCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeeccccc------ccccceecccccCCCCccceEEEe
Confidence 44 566789998 89999999876 89999999998765 444432211 14566788889998 78888875
Q ss_pred ecCCeEEEEEccCCceeEEEe-ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC-eehhhhhhccccceEEEEEec
Q psy14906 181 LSNKKIILHNILTDESLMEFI-QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR-QVENQIKKAHRKVVTGAHFLY 258 (583)
Q Consensus 181 ~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~ 258 (583)
.|+++..||+++.+....+. .|...|..+.|+|+.+++|++|+.||.|++||.+.- .+++.+ .+|...|.++.|+|
T Consensus 191 -~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el-~~HsHWvW~VRfn~ 268 (370)
T KOG1007|consen 191 -SDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQEL-PGHSHWVWAVRFNP 268 (370)
T ss_pred -CCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcccccc-CCCceEEEEEEecC
Confidence 56899999999988777765 677789999999999999999999999999999864 567777 89999999999998
Q ss_pred C-CCEEEEEeCCCeEEEEEccCCCC-------------------------CceeeEEeccCCCCCeeEEEeeCCCCEEEE
Q psy14906 259 N-EPLLVTSSPDNTLKLWIFDKADG-------------------------NGRLLRIREGHSAPPNYIQFYGNSSDNILS 312 (583)
Q Consensus 259 ~-~~~l~s~~~d~~i~~w~~~~~~~-------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 312 (583)
. .+++++++.|..|.+|....... ....+.++..|...|++++|+..|.-.+++
T Consensus 269 ~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFAS 348 (370)
T KOG1007|consen 269 EHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFAS 348 (370)
T ss_pred ccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEE
Confidence 6 56888999999999995421110 012234677799999999999888888999
Q ss_pred eeCCCcEEEEEcc
Q psy14906 313 AAGDSTLRIFNTK 325 (583)
Q Consensus 313 ~~~dg~i~iwd~~ 325 (583)
-+.||.+.|=.+.
T Consensus 349 LSYDGRviIs~V~ 361 (370)
T KOG1007|consen 349 LSYDGRVIISSVP 361 (370)
T ss_pred eccCceEEeecCC
Confidence 9999999887654
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.8e-21 Score=169.70 Aligned_cols=165 Identities=13% Similarity=0.195 Sum_probs=134.4
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEe-ccCCCeEEEEEecC-CCCEEEEEcCCCcEEEEeCCC-
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI-QTWGPVTALSFRTD-GPPMMVSGSNTGHLTVWNLED- 236 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~vwd~~~- 236 (583)
+|.+.|+|++|+.+|.+|++|+.|-.+.|||.-..+++..+. +|...|.++.|-|. ++.++++|..|..|+++|+..
T Consensus 48 GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~ 127 (758)
T KOG1310|consen 48 GHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSS 127 (758)
T ss_pred cccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecccc
Confidence 999999999999999999999999999999998888887765 89999999999995 334899999999999999984
Q ss_pred ---------CeehhhhhhccccceEEEEEecCC-CEEEEEeCCCeEEEEEccCCCCCce------eeEEeccCCCCCeeE
Q psy14906 237 ---------RQVENQIKKAHRKVVTGAHFLYNE-PLLVTSSPDNTLKLWIFDKADGNGR------LLRIREGHSAPPNYI 300 (583)
Q Consensus 237 ---------~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~w~~~~~~~~~~------~~~~~~~~~~~v~~~ 300 (583)
.+....+ ..|...|..++-.|++ +.+.++++||+++-+|+..+..... .+..+...--...++
T Consensus 128 ~~~~~d~~~~~~~~~~-~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lielk~l 206 (758)
T KOG1310|consen 128 KEGGMDHGMEETTRCW-SCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIELKCL 206 (758)
T ss_pred cccccccCccchhhhh-hhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhheeeee
Confidence 2334444 7899999999999998 7899999999999998864321111 111111122345788
Q ss_pred EEeeCCCCEEEEeeCCCcEEEEEcc
Q psy14906 301 QFYGNSSDNILSAAGDSTLRIFNTK 325 (583)
Q Consensus 301 ~~~~~~~~~l~~~~~dg~i~iwd~~ 325 (583)
..+|.+..+|+.|+.|-..++||.+
T Consensus 207 tisp~rp~~laVGgsdpfarLYD~R 231 (758)
T KOG1310|consen 207 TISPSRPYYLAVGGSDPFARLYDRR 231 (758)
T ss_pred eecCCCCceEEecCCCchhhhhhhh
Confidence 9999888999999999999999964
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.88 E-value=2e-20 Score=153.52 Aligned_cols=221 Identities=21% Similarity=0.299 Sum_probs=169.8
Q ss_pred cCCeEEEEeccc----eeeeeecccCccEEEE--ccCCC-EEEEEeCC-------CcEEEEEcCCCc---------EEEE
Q psy14906 90 ANNIIYAWRRGI----DIVGTYKGHTSPVHLI--LPFGP-HLISVDEE-------SNVKVWDIKAEE---------TYLE 146 (583)
Q Consensus 90 ~~~~i~vw~~~~----~~~~~~~~h~~~v~~i--s~~~~-~l~s~~~d-------g~i~iwd~~~~~---------~~~~ 146 (583)
.++.|.+-+++. -..+.|..|.+.|..+ +|..+ .|+++..+ -.+.||.+.... ++..
T Consensus 38 ~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~ 117 (370)
T KOG1007|consen 38 EDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVAS 117 (370)
T ss_pred CcceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhc
Confidence 456777666532 2345677889999998 67665 55555432 247899987532 2222
Q ss_pred eeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCce-eEEEe-----ccCCCeEEEEEec--CCCC
Q psy14906 147 LSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDES-LMEFI-----QTWGPVTALSFRT--DGPP 218 (583)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~-~~~~~-----~~~~~v~~~~~~~--~~~~ 218 (583)
+. ..+-+.|.|+.|.|++..||+-. |..|.+|++..+.. +..+. .+....++-+|+| ++.
T Consensus 118 Ld----------teavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgn- 185 (370)
T KOG1007|consen 118 LD----------TEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGN- 185 (370)
T ss_pred CC----------HHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccc-
Confidence 22 24456999999999999998765 77899999987765 33332 3445678889999 455
Q ss_pred EEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCC-EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCC
Q psy14906 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEP-LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP 297 (583)
Q Consensus 219 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v 297 (583)
.+++ ..|++++.||+++.+....+..+|...|..+.|+|+.+ +|++++.||.|++||... ...++..+.+|...|
T Consensus 186 qv~t-t~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~---tk~pv~el~~HsHWv 261 (370)
T KOG1007|consen 186 QVAT-TSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRK---TKFPVQELPGHSHWV 261 (370)
T ss_pred eEEE-eCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccC---CCccccccCCCceEE
Confidence 4444 45789999999999999999889999999999999865 688999999999997654 456788999999999
Q ss_pred eeEEEeeCCCCEEEEeeCCCcEEEEEccc
Q psy14906 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 326 (583)
.++.|+|.-.+++++++.|..+.+|....
T Consensus 262 W~VRfn~~hdqLiLs~~SDs~V~Lsca~s 290 (370)
T KOG1007|consen 262 WAVRFNPEHDQLILSGGSDSAVNLSCASS 290 (370)
T ss_pred EEEEecCccceEEEecCCCceeEEEeccc
Confidence 99999997788999999999999998654
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.9e-20 Score=160.20 Aligned_cols=316 Identities=13% Similarity=0.140 Sum_probs=223.3
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEcc------CCceeEEEe-ccCCCeEEEEEecCCCCEEEEEcCCCcEEEE
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNIL------TDESLMEFI-QTWGPVTALSFRTDGPPMMVSGSNTGHLTVW 232 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~------~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 232 (583)
+|.++|.++.|+.++++||+|+.|..+++|++. +.+++.... .|...|.|++|...++ .+++|..+++|..-
T Consensus 54 ~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~-~~~SG~~~~~VI~H 132 (609)
T KOG4227|consen 54 EHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENR-FLYSGERWGTVIKH 132 (609)
T ss_pred hhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCe-eEecCCCcceeEee
Confidence 899999999999999999999999999999985 335555554 4558999999998887 89999999999999
Q ss_pred eCCCCeehhhhhhcccc---ceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCE
Q psy14906 233 NLEDRQVENQIKKAHRK---VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN 309 (583)
Q Consensus 233 d~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 309 (583)
|+++.+.+..+ .|.. .|..+..+|..+.|++.+.++.|.+||.........++ .+........++.|+|....+
T Consensus 133 DiEt~qsi~V~--~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~-~~AN~~~~F~t~~F~P~~P~L 209 (609)
T KOG4227|consen 133 DIETKQSIYVA--NENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLV-LPANSGKNFYTAEFHPETPAL 209 (609)
T ss_pred ecccceeeeee--cccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCcee-eecCCCccceeeeecCCCcee
Confidence 99998888776 4544 89999999999999999999999999776443333333 233345567889999988899
Q ss_pred EEEeeCCCcEEEEEccccccce-eeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEE
Q psy14906 310 ILSAAGDSTLRIFNTKSETSNK-NLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVS 388 (583)
Q Consensus 310 l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 388 (583)
|++.+..+-+.+||.+.....- ..+.
T Consensus 210 i~~~~~~~G~~~~D~R~~~~~~~~~~~----------------------------------------------------- 236 (609)
T KOG4227|consen 210 ILVNSETGGPNVFDRRMQARPVYQRSM----------------------------------------------------- 236 (609)
T ss_pred EEeccccCCCCceeeccccchHHhhhc-----------------------------------------------------
Confidence 9999999999999987643210 0000
Q ss_pred EeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccc-cccCC-CCCCCcccCeeEEE
Q psy14906 389 LWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHR-GSYGH-DNQPGHVGGVRGVV 466 (583)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~-~~~~~h~~~v~~~~ 466 (583)
...+..+ ...-..+.|+|+|..+++--....-.+||+.+..+. .++.. +.-......+.+++
T Consensus 237 ----------~~~L~~~------~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~ 300 (609)
T KOG4227|consen 237 ----------FKGLPQE------NTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMT 300 (609)
T ss_pred ----------cccCccc------chhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEeccCCCCcceeeeeeeeee
Confidence 0000000 022356778898887776555555566777664432 22210 00012234567778
Q ss_pred EeCCCcEEEEeecCCcEEEEEccCCCCCceEE---eeccC-CeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecc
Q psy14906 467 SDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS---IKLDN-GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG 542 (583)
Q Consensus 467 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 542 (583)
|.-|.. +++|+.+=.|++|.+... ....- +.+.. .. |. .|. -.+.+..++|
T Consensus 301 F~~D~~-v~tGSD~~~i~~WklP~~--~ds~G~~~IG~~~~~~------~~-----------~~~-----i~~~~~VLrG 355 (609)
T KOG4227|consen 301 FIDDYT-VATGSDHWGIHIWKLPRA--NDSYGFTQIGHDEEEM------PS-----------EIF-----IEKELTVLRG 355 (609)
T ss_pred eeccee-eeccCcccceEEEecCCC--ccccCccccCcchhhC------ch-----------hhe-----ecceeEEEec
Confidence 876544 899999999999998754 11111 11110 00 00 000 0234567899
Q ss_pred cccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 543 HMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 543 h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
|.+-++.+.|+|...+|++.+..+.+++|.-
T Consensus 356 HRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~ 386 (609)
T KOG4227|consen 356 HRSVPNQVRFSQHNNLLVSSGVENSFKLWSD 386 (609)
T ss_pred ccccccceeecCCcceEeccchhhheecccc
Confidence 9999999999999999999999999999963
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.3e-19 Score=165.46 Aligned_cols=278 Identities=13% Similarity=0.175 Sum_probs=180.6
Q ss_pred EEEEEcCCCcEEEEeCCC-Ce--ehhhhhhccccceEEEEEecCCCEEEEEe-CCCeEEEEEccCCCCCceeeEEeccCC
Q psy14906 219 MMVSGSNTGHLTVWNLED-RQ--VENQIKKAHRKVVTGAHFLYNEPLLVTSS-PDNTLKLWIFDKADGNGRLLRIREGHS 294 (583)
Q Consensus 219 ~l~s~~~dg~i~vwd~~~-~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~ 294 (583)
++++...++.|.+||+.+ ++ .+..+ .+.+....++++|++++|++++ .++.|.+|+++ ..+......... ..
T Consensus 4 ~y~~~~~~~~I~~~~~~~~g~l~~~~~~--~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~-~~g~l~~~~~~~-~~ 79 (330)
T PRK11028 4 VYIASPESQQIHVWNLNHEGALTLLQVV--DVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIA-DDGALTFAAESP-LP 79 (330)
T ss_pred EEEEcCCCCCEEEEEECCCCceeeeeEE--ecCCCCccEEECCCCCEEEEEECCCCcEEEEEEC-CCCceEEeeeec-CC
Confidence 445557789999999964 33 34444 2345677899999999887664 57889999886 222223333322 23
Q ss_pred CCCeeEEEeeCCCCEEEEeeC-CCcEEEEEccccccc-eeeccchhhhhhhhhhcchhccccccCCCccceeeeeccccc
Q psy14906 295 APPNYIQFYGNSSDNILSAAG-DSTLRIFNTKSETSN-KNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREK 372 (583)
Q Consensus 295 ~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (583)
..+..++++| +++++++++. ++.|.+|++.+.... ....
T Consensus 80 ~~p~~i~~~~-~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~-------------------------------------- 120 (330)
T PRK11028 80 GSPTHISTDH-QGRFLFSASYNANCVSVSPLDKDGIPVAPIQ-------------------------------------- 120 (330)
T ss_pred CCceEEEECC-CCCEEEEEEcCCCeEEEEEECCCCCCCCcee--------------------------------------
Confidence 3567899997 7888887764 789999998642211 0000
Q ss_pred ccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe-cCceEEEEEcccCcccccc-
Q psy14906 373 DWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRFNIQSGAHRGSY- 450 (583)
Q Consensus 373 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~- 450 (583)
. . .....+..++++|++++++++. .++.|.+||+.+...+...
T Consensus 121 ----------------~-----------------~--~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~ 165 (330)
T PRK11028 121 ----------------I-----------------I--EGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQE 165 (330)
T ss_pred ----------------e-----------------c--cCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccC
Confidence 0 0 0002356788999999886554 5699999999764322110
Q ss_pred CCCCCCCcccCeeEEEEeCCCcEEEEeec-CCcEEEEEccCCCCC--ceEEeec-------cCCeeeEEeccCCcEEEEE
Q psy14906 451 GHDNQPGHVGGVRGVVSDNLNQIVISGGN-DQTVKVWHFKQTGKP--PLRSIKL-------DNGISFFRTHQESSMLAVC 520 (583)
Q Consensus 451 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~--~~~~~~~-------~~~v~~~~~s~~~~~l~~~ 520 (583)
..............++|+|++++++++.. +++|.+|+++..... .+..+.. ......+.++|+|++++++
T Consensus 166 ~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~ 245 (330)
T PRK11028 166 PAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYAC 245 (330)
T ss_pred CCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEe
Confidence 00000112344678999999999988775 899999999742112 2222221 1123358899999999988
Q ss_pred eC-CceEEEEEccccceEEeecccc---cceeeEEecCCCcEEEEEeC-CCeEEEEeCC
Q psy14906 521 LD-DFTVNIIDIDTCTIIRKLSGHM---GQLTDADFSPDSRWLITASM-DCTIRVWDIP 574 (583)
Q Consensus 521 ~~-dg~i~i~d~~~~~~~~~~~~h~---~~v~~l~~s~d~~~l~s~~~-d~~i~vw~~~ 574 (583)
.. ++.|.+|+++.......+.++. .....+.|+|||++|+++.. +++|.+|+++
T Consensus 246 ~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 246 DRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred cCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 64 6899999996543222222221 24668999999999998775 8899999874
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.9e-21 Score=171.23 Aligned_cols=254 Identities=16% Similarity=0.225 Sum_probs=187.3
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccC--------CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEE
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILT--------DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTV 231 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v 231 (583)
.|...|+.++|.|....|++++.||.|.+|+++. -+++.+|++|.++|.|++..+++. .+++|+.||+|+.
T Consensus 292 s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~-~~ysgg~Dg~I~~ 370 (577)
T KOG0642|consen 292 SHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGE-HCYSGGIDGTIRC 370 (577)
T ss_pred cchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCce-EEEeeccCceeee
Confidence 7889999999999999999999999999999932 367889999999999999999999 8999999999999
Q ss_pred EeCCCC----------eehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEE
Q psy14906 232 WNLEDR----------QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ 301 (583)
Q Consensus 232 wd~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~ 301 (583)
|++... .+...+ .||.+.|+.+++++....|++++.||++++|+.. .... +........+...++.
T Consensus 371 w~~p~n~dp~ds~dp~vl~~~l-~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~--~~~~-~~f~~~~e~g~Plsvd 446 (577)
T KOG0642|consen 371 WNLPPNQDPDDSYDPSVLSGTL-LGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPT--EESP-CTFGEPKEHGYPLSVD 446 (577)
T ss_pred eccCCCCCcccccCcchhccce-eccccceeeeeecccccceeeecCCceEEeeccC--CcCc-cccCCccccCCcceEe
Confidence 966421 223344 7999999999999999999999999999999543 2222 1111111223345555
Q ss_pred EeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEe
Q psy14906 302 FYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIH 381 (583)
Q Consensus 302 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (583)
+-..+-.+.++...-+.--+.+.+.......+.....
T Consensus 447 ~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~------------------------------------------- 483 (577)
T KOG0642|consen 447 RTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSAS------------------------------------------- 483 (577)
T ss_pred eccchhHhhhhhcccccccchhhhhhhheeeccccCC-------------------------------------------
Confidence 5421112222222222222333333222222111000
Q ss_pred cCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccC
Q psy14906 382 TGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG 461 (583)
Q Consensus 382 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~ 461 (583)
.. ......+.-+..+|.+.+.+.+..|+.|+++|..++..+... ..|...
T Consensus 484 ---~~----------------------~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~-----~a~~~s 533 (577)
T KOG0642|consen 484 ---PG----------------------PRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSM-----VAHKDS 533 (577)
T ss_pred ---Cc----------------------ccccCccceEEecCCCCeeEecccCCceecccccccccchhe-----eeccce
Confidence 00 000145677888999999999999999999999999999888 799999
Q ss_pred eeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 462 VRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 462 v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
++++++.|+|.+|++++.|+.+++|.+...
T Consensus 534 vtslai~~ng~~l~s~s~d~sv~l~kld~k 563 (577)
T KOG0642|consen 534 VTSLAIDPNGPYLMSGSHDGSVRLWKLDVK 563 (577)
T ss_pred ecceeecCCCceEEeecCCceeehhhccch
Confidence 999999999999999999999999998765
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-19 Score=161.30 Aligned_cols=222 Identities=13% Similarity=0.148 Sum_probs=166.5
Q ss_pred CCCCCeEEEEeeC--eEEEEEcCCeEEEEe-ccceeeeeecccCccEE---EE---cc----CCCEEEEEeCCCcEEEEE
Q psy14906 71 QHEDDITCLSSDF--FHIYTSANNIIYAWR-RGIDIVGTYKGHTSPVH---LI---LP----FGPHLISVDEESNVKVWD 137 (583)
Q Consensus 71 ~h~~~v~~~~~~~--~~~~~~~~~~i~vw~-~~~~~~~~~~~h~~~v~---~i---s~----~~~~l~s~~~dg~i~iwd 137 (583)
.|...+.|+.+.+ ..+.+++|..+.+|. ........+.-....+. .+ +. ....++.++.||.+.|.+
T Consensus 12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il~ 91 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVILN 91 (737)
T ss_pred ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEec
Confidence 3666777777743 577777777777775 43322222221111111 11 11 124677788899999988
Q ss_pred cCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCC
Q psy14906 138 IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGP 217 (583)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 217 (583)
..++.-..+. .|.+.+.+-.|+|||.-|+++++||.|++|.- +|-...++.....+|+|++|.|+.+
T Consensus 92 -k~~rVE~sv~-----------AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~ 158 (737)
T KOG1524|consen 92 -KSARVERSIS-----------AHAAAISSGRWSPDGAGLLTAGEDGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSN 158 (737)
T ss_pred -ccchhhhhhh-----------hhhhhhhhcccCCCCceeeeecCCceEEEEec-cchHHHHHhhcCceeEEEEECCCCC
Confidence 4466666666 99999999999999999999999999999985 5766666667778999999999988
Q ss_pred CEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCC
Q psy14906 218 PMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP 297 (583)
Q Consensus 218 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v 297 (583)
.++++.+ +.+.+=.+.....+... ++|.+-|.++.|++..+++++|++|-..++||- .+..+..-..|.-+|
T Consensus 159 ~vl~c~g--~h~~IKpL~~n~k~i~W-kAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~-----~G~~Lf~S~~~ey~I 230 (737)
T KOG1524|consen 159 SIVFCQG--GHISIKPLAANSKIIRW-RAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA-----QGANLFTSAAEEYAI 230 (737)
T ss_pred ceEEecC--CeEEEeecccccceeEE-eccCcEEEEeecCccccceeecCCceeEEeecc-----cCcccccCChhccce
Confidence 6777665 45666666666666666 799999999999999999999999999999953 577788888899999
Q ss_pred eeEEEeeCCCCEEEEeeC
Q psy14906 298 NYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~ 315 (583)
++++|.| + ..++.++.
T Consensus 231 TSva~np-d-~~~~v~S~ 246 (737)
T KOG1524|consen 231 TSVAFNP-E-KDYLLWSY 246 (737)
T ss_pred eeeeecc-c-cceeeeee
Confidence 9999998 4 55555554
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.5e-21 Score=180.26 Aligned_cols=279 Identities=18% Similarity=0.207 Sum_probs=219.3
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
+|...|.|..|...|.++++|+.|..++||..++..++....+|.+.++.++.+.++. ++++++.|..|++|-+.++.+
T Consensus 188 gH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~-~iaaaS~D~vIrvWrl~~~~p 266 (1113)
T KOG0644|consen 188 GHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNT-MIAAASNDKVIRVWRLPDGAP 266 (1113)
T ss_pred hhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhh-hhhhcccCceEEEEecCCCch
Confidence 8999999999999999999999999999999999999999999999999999998887 899999999999999999999
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCC--CceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG--NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS 317 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 317 (583)
+..+ .+|++.|++++|+|-. +.+.||++++||.+.... ..++.. + .....+.++.|. +++..+++++.|+
T Consensus 267 vsvL-rghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~-~-~~~~~~~s~~~~-~~~~~f~Tgs~d~ 338 (1113)
T KOG0644|consen 267 VSVL-RGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLK-F-TEKDLVDSILFE-NNGDRFLTGSRDG 338 (1113)
T ss_pred HHHH-hccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCC-c-ccccceeeeecc-ccccccccccCCc
Confidence 9999 8999999999999954 778899999997652110 011111 1 112345566666 3788899999998
Q ss_pred cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccc
Q psy14906 318 TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKM 397 (583)
Q Consensus 318 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 397 (583)
.-..|..........
T Consensus 339 ea~n~e~~~l~~~~~----------------------------------------------------------------- 353 (1113)
T KOG0644|consen 339 EARNHEFEQLAWRSN----------------------------------------------------------------- 353 (1113)
T ss_pred ccccchhhHhhhhcc-----------------------------------------------------------------
Confidence 888777543211100
Q ss_pred cceeeecccccccCCCCceEEEEccC-CcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcE-EE
Q psy14906 398 DDMFLVPERCKQAKQSKPTCVYITHC-GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQI-VI 475 (583)
Q Consensus 398 ~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~ 475 (583)
.+.-+..+.+ ..+.+++-.+-.+.+|++.+|...+.+ .+|...+..+.++|-+.. ..
T Consensus 354 ----------------~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l-----~ghsd~~yvLd~Hpfn~ri~m 412 (1113)
T KOG0644|consen 354 ----------------LLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNL-----MGHSDEVYVLDVHPFNPRIAM 412 (1113)
T ss_pred ----------------ceEEEeccccccccceeeeeeeEeeeeecccchhhhhh-----cccccceeeeeecCCCcHhhh
Confidence 0000111111 134555666778999999999999888 799999999999996654 46
Q ss_pred EeecCCcEEEEEccCCCCCceEEe-eccCCeeeEEeccCCcEEEEEeCCceEEEEEccccc
Q psy14906 476 SGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT 535 (583)
Q Consensus 476 s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 535 (583)
+++.||...|||+-.+ .+++.. ..+..+...+||+||..++....-|.++|.....++
T Consensus 413 sag~dgst~iwdi~eg--~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~ 471 (1113)
T KOG0644|consen 413 SAGYDGSTIIWDIWEG--IPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQSK 471 (1113)
T ss_pred hccCCCceEeeecccC--CcceeeecccceeeccccCCCCceEecCCCCCceEEeccCCCc
Confidence 8899999999999888 554433 446778888999999999999999999999875554
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4e-18 Score=158.95 Aligned_cols=281 Identities=11% Similarity=0.074 Sum_probs=181.8
Q ss_pred EEEecCCeEEEEEccC-Cc--eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC-Cee--hhhhhhccccce
Q psy14906 178 GVGLSNKKIILHNILT-DE--SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED-RQV--ENQIKKAHRKVV 251 (583)
Q Consensus 178 ~~~~~d~~i~iw~~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~--~~~~~~~~~~~v 251 (583)
++...++.|.+|++.+ ++ .+..+.. .+....++++|+++.+++++..++.|.+|++.. ++. .... ......
T Consensus 6 ~~~~~~~~I~~~~~~~~g~l~~~~~~~~-~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~--~~~~~p 82 (330)
T PRK11028 6 IASPESQQIHVWNLNHEGALTLLQVVDV-PGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAES--PLPGSP 82 (330)
T ss_pred EEcCCCCCEEEEEECCCCceeeeeEEec-CCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeee--cCCCCc
Confidence 3446789999999964 33 4455543 366788999999994444445688999999873 332 2222 123456
Q ss_pred EEEEEecCCCEEEEEeC-CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee-CCCcEEEEEcccccc
Q psy14906 252 TGAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA-GDSTLRIFNTKSETS 329 (583)
Q Consensus 252 ~~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~ 329 (583)
..++|+|++++|++++. ++.+.+|+++........+..+.+ ......++++| +++++++++ .++.|.+||+.+...
T Consensus 83 ~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~~p-~g~~l~v~~~~~~~v~v~d~~~~g~ 160 (330)
T PRK11028 83 THISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEG-LEGCHSANIDP-DNRTLWVPCLKEDRIRLFTLSDDGH 160 (330)
T ss_pred eEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccC-CCcccEeEeCC-CCCEEEEeeCCCCEEEEEEECCCCc
Confidence 78999999998888764 789999988632212223333332 23457788997 777776554 569999999976322
Q ss_pred ceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccc
Q psy14906 330 NKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQ 409 (583)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 409 (583)
....... ....
T Consensus 161 l~~~~~~---------------------------------------------------------------------~~~~ 171 (330)
T PRK11028 161 LVAQEPA---------------------------------------------------------------------EVTT 171 (330)
T ss_pred ccccCCC---------------------------------------------------------------------ceec
Confidence 1100000 0000
Q ss_pred cCCCCceEEEEccCCcEEEEEec-CceEEEEEccc--Ccc--ccccCCC-CCCCcccCeeEEEEeCCCcEEEEee-cCCc
Q psy14906 410 AKQSKPTCVYITHCGNFVLIGYS-SGHVDRFNIQS--GAH--RGSYGHD-NQPGHVGGVRGVVSDNLNQIVISGG-NDQT 482 (583)
Q Consensus 410 ~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~--~~~--~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~ 482 (583)
.....+..+.|+|+|+++++... ++.|.+|++.. +.. ...+... ....+......+.++|++++++++. .++.
T Consensus 172 ~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~ 251 (330)
T PRK11028 172 VEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASL 251 (330)
T ss_pred CCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCe
Confidence 00134668899999999988876 89999999973 222 2222110 0001222344689999999988875 4789
Q ss_pred EEEEEccCCCCC--ceEEeeccCCeeeEEeccCCcEEEEEeC-CceEEEEEcc
Q psy14906 483 VKVWHFKQTGKP--PLRSIKLDNGISFFRTHQESSMLAVCLD-DFTVNIIDID 532 (583)
Q Consensus 483 i~iwd~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~ 532 (583)
|.+|+++..... .+...........+.++|||++|+++.. +++|.+|+++
T Consensus 252 I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 252 ISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred EEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 999999765211 2223333345678999999999998776 8899999874
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.3e-21 Score=185.44 Aligned_cols=250 Identities=16% Similarity=0.236 Sum_probs=198.4
Q ss_pred cCCcceEEEeeCCCCCE----EEEEecCCeEEEEEccC---C---ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcE
Q psy14906 160 RWNSCVNVLEPSPVVDI----IGVGLSNKKIILHNILT---D---ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHL 229 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~----l~~~~~d~~i~iw~~~~---~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i 229 (583)
....+...++|.+.+.. ||.|..||.|.+||... + +.+.++..|++.|..+.|++....+|++|+.||.|
T Consensus 62 ~s~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI 141 (1049)
T KOG0307|consen 62 QSSNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEI 141 (1049)
T ss_pred cccccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcE
Confidence 34577889999987775 88899999999999865 2 34566778999999999999987799999999999
Q ss_pred EEEeCCCCeehhhh-hhccccceEEEEEecC-CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCC--CCCeeEEEeeC
Q psy14906 230 TVWNLEDRQVENQI-KKAHRKVVTGAHFLYN-EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS--APPNYIQFYGN 305 (583)
Q Consensus 230 ~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~ 305 (583)
.|||+.+.+..... .....+.|.+++|+.. ...|++++.+|.+.|||++.. +.+..+..+. ..+..++|+|+
T Consensus 142 ~iWDlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~----~pii~ls~~~~~~~~S~l~WhP~ 217 (1049)
T KOG0307|consen 142 LIWDLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKK----KPIIKLSDTPGRMHCSVLAWHPD 217 (1049)
T ss_pred EEeccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCC----CcccccccCCCccceeeeeeCCC
Confidence 99999986555544 1234678999999865 457888999999999987642 3344444443 34678999998
Q ss_pred CCCEEEEeeCCC---cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEec
Q psy14906 306 SSDNILSAAGDS---TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHT 382 (583)
Q Consensus 306 ~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (583)
....+++++.|. .|.+||++.....
T Consensus 218 ~aTql~~As~dd~~PviqlWDlR~assP---------------------------------------------------- 245 (1049)
T KOG0307|consen 218 HATQLLVASGDDSAPVIQLWDLRFASSP---------------------------------------------------- 245 (1049)
T ss_pred CceeeeeecCCCCCceeEeecccccCCc----------------------------------------------------
Confidence 778888888754 5888887653221
Q ss_pred CCceEEEeecCcccccceeeecccccccCCCCceEEEEccCC-cEEEEEecCceEEEEEcccCccccccCCCCCCCcccC
Q psy14906 383 GKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCG-NFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG 461 (583)
Q Consensus 383 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~ 461 (583)
......|+..|.++.|++.+ +++++++.|+.|.+|+.++++.+..+ ......
T Consensus 246 ----------------------~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~-----p~~~nW 298 (1049)
T KOG0307|consen 246 ----------------------LKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGEL-----PAQGNW 298 (1049)
T ss_pred ----------------------hhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeec-----CCCCcc
Confidence 11123344779999999976 88999999999999999999999998 567889
Q ss_pred eeEEEEeCCCc-EEEEeecCCcEEEEEccCCC
Q psy14906 462 VRGVVSDNLNQ-IVISGGNDQTVKVWHFKQTG 492 (583)
Q Consensus 462 v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~ 492 (583)
+..+.|+|... .++.++-||.|.|+.+....
T Consensus 299 ~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 299 CFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred eeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 99999999776 78888999999999998764
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.9e-18 Score=163.65 Aligned_cols=277 Identities=15% Similarity=0.181 Sum_probs=202.0
Q ss_pred CeEEEEEccCC-ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee-----hhhhhhccccceEEEEEe
Q psy14906 184 KKIILHNILTD-ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV-----ENQIKKAHRKVVTGAHFL 257 (583)
Q Consensus 184 ~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-----~~~~~~~~~~~v~~~~~~ 257 (583)
+.+.+|+++.. .+...+... ..|++++|+|..+.+++.|+.+|.|.+||+..+.. +......|..+++.+.|.
T Consensus 222 ~~~~vW~~~~p~~Pe~~~~~~-s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~ 300 (555)
T KOG1587|consen 222 GVLLVWSLKNPNTPELVLESP-SEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWL 300 (555)
T ss_pred ceEEEEecCCCCCceEEEecC-CceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEe
Confidence 47999999866 444445444 89999999999988999999999999999987654 222335688999999997
Q ss_pred cCCC--EEEEEeCCCeEEEEEccCCCCC--ceeeEEec------cCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccc
Q psy14906 258 YNEP--LLVTSSPDNTLKLWIFDKADGN--GRLLRIRE------GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 258 ~~~~--~l~s~~~d~~i~~w~~~~~~~~--~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
.+.. -|++++.||.|..|+++.-... ..+..... .....++++.|.+.+...++.|+.+|.|.--+....
T Consensus 301 ~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~ 380 (555)
T KOG1587|consen 301 QNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGY 380 (555)
T ss_pred ccCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCC
Confidence 6544 4999999999999977643210 11111111 223467899999988899999999999876443322
Q ss_pred ccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccc
Q psy14906 328 TSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERC 407 (583)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 407 (583)
+.... ........
T Consensus 381 ~~~~~-------------------------------------------------------------------~~~~~~~~ 393 (555)
T KOG1587|consen 381 TPAPE-------------------------------------------------------------------VSYKGHST 393 (555)
T ss_pred ccccc-------------------------------------------------------------------cccccccc
Confidence 11110 00001111
Q ss_pred cccCCCCceEEEEccCCcEEEEEecCceEEEEEcc-cCccccccCCCCCCCcccCeeEEEEeCCCc-EEEEeecCCcEEE
Q psy14906 408 KQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQ-SGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ-IVISGGNDQTVKV 485 (583)
Q Consensus 408 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~i 485 (583)
...|.+.+.++.++|=+..++....|..++||... ...++..+ ..+...+++++|||... .++++..||.+.+
T Consensus 394 ~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~-----~~~~~~v~~vaWSptrpavF~~~d~~G~l~i 468 (555)
T KOG1587|consen 394 FITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSL-----DSSPDYVTDVAWSPTRPAVFATVDGDGNLDI 468 (555)
T ss_pred ccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhh-----hhccceeeeeEEcCcCceEEEEEcCCCceeh
Confidence 12233789999999987666665569999999988 66666666 56777899999999764 6778888999999
Q ss_pred EEccCCCCCceEEeecc-CCeeeEEeccCCcEEEEEeCCceEEEEEccc
Q psy14906 486 WHFKQTGKPPLRSIKLD-NGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533 (583)
Q Consensus 486 wd~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 533 (583)
||+......+....... ...+.+.|+++|+.|++|...|++++|++..
T Consensus 469 WDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 469 WDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred hhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 99987755666555444 4567788889999999999999999999953
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-18 Score=160.72 Aligned_cols=454 Identities=13% Similarity=0.111 Sum_probs=280.5
Q ss_pred eeeecCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeC-------------eEE--EEEc
Q psy14906 26 GYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDF-------------FHI--YTSA 90 (583)
Q Consensus 26 g~~~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~-------------~~~--~~~~ 90 (583)
|..+.+.-.++.|+|. -+|+|+.++.|.+-|..+.++++.++-|...|+.+.+.+ .++ ++..
T Consensus 11 G~l~~sN~~A~Dw~~~---GLiAygshslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~ 87 (1062)
T KOG1912|consen 11 GPLSRSNRNAADWSPS---GLIAYGSHSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADI 87 (1062)
T ss_pred CCCCcccccccccCcc---ceEEEecCceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccc
Confidence 4445455567777543 478999999999999999999999999999999988611 233 3346
Q ss_pred CCeEEEEec-cceeeeeecccCccEEEE-----ccCC-CEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCc
Q psy14906 91 NNIIYAWRR-GIDIVGTYKGHTSPVHLI-----LPFG-PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS 163 (583)
Q Consensus 91 ~~~i~vw~~-~~~~~~~~~~h~~~v~~i-----s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (583)
.|.|.+||. ....+-.+..|..++..+ -++. ..|++...-.+|.+|+..+|+...... ....
T Consensus 88 ~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~-----------ys~~ 156 (1062)
T KOG1912|consen 88 SGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYD-----------YSHE 156 (1062)
T ss_pred cCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccc-----------cCCc
Confidence 689999995 455566678888888876 3344 466666777899999999999999887 5566
Q ss_pred ceEEEeeCC-CCCEEEEEecCCeEEEEEccC-------CceeEEEeccCC----------------C---------eEEE
Q psy14906 164 CVNVLEPSP-VVDIIGVGLSNKKIILHNILT-------DESLMEFIQTWG----------------P---------VTAL 210 (583)
Q Consensus 164 ~i~~~~~s~-~~~~l~~~~~d~~i~iw~~~~-------~~~~~~~~~~~~----------------~---------v~~~ 210 (583)
...|+.+.| |.+.+..-+..|.+.+-+.-. ++..+.-..|.+ . ...+
T Consensus 157 iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~f 236 (1062)
T KOG1912|consen 157 ILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQF 236 (1062)
T ss_pred ceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhh
Confidence 777899988 667777766777776666421 222222222211 0 1134
Q ss_pred EEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCC--EEEEEeCCCeEEEEEccCCCCCc----
Q psy14906 211 SFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEP--LLVTSSPDNTLKLWIFDKADGNG---- 284 (583)
Q Consensus 211 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~d~~i~~w~~~~~~~~~---- 284 (583)
+|+|.-+..++.. ....+.++|++-..++..+ .-..+.+.-+.+.|+++ .|++...||.+.+|.-.......
T Consensus 237 af~p~~rn~lfi~-~prellv~dle~~~~l~vv-pier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~ 314 (1062)
T KOG1912|consen 237 AFSPHWRNILFIT-FPRELLVFDLEYECCLAVV-PIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPN 314 (1062)
T ss_pred hcChhhhceEEEE-eccceEEEcchhhceeEEE-EeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccc
Confidence 6788766444433 4567999999987777776 34556667778887754 68899999999999532211000
Q ss_pred -----------eeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 285 -----------RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 285 -----------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
..++.++ .-.+......|.+...++.--.+|...+|.+.+++.........
T Consensus 315 ~~l~~dl~~Q~~~vr~m~--~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~---------------- 376 (1062)
T KOG1912|consen 315 ASLSMDLGEQVHVVRPME--EFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSS---------------- 376 (1062)
T ss_pred hhhccccccceEEEeech--hcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCccccccc----------------
Confidence 0111111 11122223334334445555567888899988765432221100
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCC-------cE
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCG-------NF 426 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-------~~ 426 (583)
.+-...+.+......-....+..-+.+| ....+....... .....+-..-.|.+ .+
T Consensus 377 ----iel~~pf~f~~~~~~v~k~~l~~LS~dg--------~h~sGs~~~~~~-----p~p~~t~~~~~p~~n~~~~~~pL 439 (1062)
T KOG1912|consen 377 ----IELVLPFDFNLSTKLVGKTSLISLSDDG--------SHSSGSTCVRMR-----PMPELTKVENDPGGNTPAGTVPL 439 (1062)
T ss_pred ----ccccccccccCceeehhhccccchhhcC--------CCCCCceeeecc-----cCcccceeecCCCCCccceeeee
Confidence 0000011111000000001111111111 000000000000 00011111112222 37
Q ss_pred EEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEE---------eecCCcEEEEEccCCCCCceE
Q psy14906 427 VLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS---------GGNDQTVKVWHFKQTGKPPLR 497 (583)
Q Consensus 427 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s---------~~~dg~i~iwd~~~~~~~~~~ 497 (583)
+|+|++.|+|.++|+.++.....+ ..|.+.|.++.|..+..++-. ++.-+.+.+-|++++..+..+
T Consensus 440 vAvGT~sGTV~vvdvst~~v~~~f-----svht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR 514 (1062)
T KOG1912|consen 440 VAVGTNSGTVDVVDVSTNAVAASF-----SVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFR 514 (1062)
T ss_pred EEeecCCceEEEEEecchhhhhhh-----cccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccc
Confidence 899999999999999999999888 789999999999776654422 222345778899988544555
Q ss_pred Eeec--cCCeeeEEeccCCcEEEEEeCCceEEEEEccccc
Q psy14906 498 SIKL--DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT 535 (583)
Q Consensus 498 ~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 535 (583)
..+. ..+|..+..|..|+||+....+.-+.+||+++..
T Consensus 515 ~l~~~despI~~irvS~~~~yLai~Fr~~plEiwd~kt~~ 554 (1062)
T KOG1912|consen 515 GLQKPDESPIRAIRVSSSGRYLAILFRREPLEIWDLKTLR 554 (1062)
T ss_pred cCCCCCcCcceeeeecccCceEEEEecccchHHHhhccch
Confidence 4433 3589999999999999999999999999996654
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=6.8e-19 Score=169.47 Aligned_cols=293 Identities=16% Similarity=0.296 Sum_probs=204.8
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhc--cccceEEEEEec--CCCEEEEEeCCCeEEEEEccCCC
Q psy14906 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA--HRKVVTGAHFLY--NEPLLVTSSPDNTLKLWIFDKAD 281 (583)
Q Consensus 206 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~--~~~~l~s~~~d~~i~~w~~~~~~ 281 (583)
+...+.|+|-.+ .++++...-.|++||.+.++.+..+..+ ....|+.+.+-. |..++++++.||.|+||+--...
T Consensus 1066 ~pk~~~~hpf~p-~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~ 1144 (1387)
T KOG1517|consen 1066 PPKTLKFHPFEP-QIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADK 1144 (1387)
T ss_pred CCceeeecCCCc-eeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccc
Confidence 456788888887 7888887779999999999988877322 234788888864 45689999999999999522211
Q ss_pred -CCceeeEEeccCC-------CCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 282 -GNGRLLRIREGHS-------APPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 282 -~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
+..+.+....+-. +.-.-+.|-.. ..+|++++.-..|+|||.........+...+
T Consensus 1145 ~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~-~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s---------------- 1207 (1387)
T KOG1517|consen 1145 WKKPELVTAWSSLSDQLPGARGTGLVVDWQQQ-SGHLLVTGDVRSIRIWDAHKEQVVADIPYGS---------------- 1207 (1387)
T ss_pred cCCceeEEeeccccccCccCCCCCeeeehhhh-CCeEEecCCeeEEEEEecccceeEeecccCC----------------
Confidence 2334443332211 11123455543 3455555556888999987766554432210
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc-CCcEEEEEec
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH-CGNFVLIGYS 432 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~ 432 (583)
..-++++.-+. .|+.+++|..
T Consensus 1208 ----------------------------------------------------------~t~vTaLS~~~~~gn~i~AGfa 1229 (1387)
T KOG1517|consen 1208 ----------------------------------------------------------STLVTALSADLVHGNIIAAGFA 1229 (1387)
T ss_pred ----------------------------------------------------------CccceeecccccCCceEEEeec
Confidence 13455555443 3699999999
Q ss_pred CceEEEEEcccCccccccCCCCCCCcccC--eeEEEEeCCCc-EEEEeecCCcEEEEEccCCCCCceEEeec----cCCe
Q psy14906 433 SGHVDRFNIQSGAHRGSYGHDNQPGHVGG--VRGVVSDNLNQ-IVISGGNDQTVKVWHFKQTGKPPLRSIKL----DNGI 505 (583)
Q Consensus 433 dg~i~i~d~~~~~~~~~~~~~~~~~h~~~--v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~v 505 (583)
||.|++||.+........... +.|+.. |..+.+.+.|- .|++|+.||.|++||++.........+.. .+..
T Consensus 1230 DGsvRvyD~R~a~~ds~v~~~--R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~l 1307 (1387)
T KOG1517|consen 1230 DGSVRVYDRRMAPPDSLVCVY--REHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSAL 1307 (1387)
T ss_pred CCceEEeecccCCccccceee--cccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccc
Confidence 999999998865542221111 678777 99999988765 49999999999999999842122222222 3359
Q ss_pred eeEEeccCCcEEEEEeCCceEEEEEccccceEEeecc-------cccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccc
Q psy14906 506 SFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG-------HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578 (583)
Q Consensus 506 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~ 578 (583)
+++..++....+|+|+. +.|+||++.. +.+..++. ..+.+.|++|+|-.-.||.|+.|.+|.||....++.
T Consensus 1308 Tal~VH~hapiiAsGs~-q~ikIy~~~G-~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~~ 1385 (1387)
T KOG1517|consen 1308 TALTVHEHAPIIASGSA-QLIKIYSLSG-EQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKPRL 1385 (1387)
T ss_pred eeeeeccCCCeeeecCc-ceEEEEecCh-hhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCcCC
Confidence 99999999999999998 9999999873 33333332 235689999999999999999999999998776543
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=147.19 Aligned_cols=295 Identities=15% Similarity=0.153 Sum_probs=201.1
Q ss_pred eeeeecccCccEEEE-ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe
Q psy14906 103 IVGTYKGHTSPVHLI-LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL 181 (583)
Q Consensus 103 ~~~~~~~h~~~v~~i-s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 181 (583)
+...|++|.+.|+++ .....+|.+|..-|.|++|++++.+....+.. .+...|+.+.--|+ +.|.+-+
T Consensus 6 P~fvLRp~~~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt~r~~~~~r~----------~g~~~it~lq~~p~-d~l~tqg 74 (323)
T KOG0322|consen 6 PFFVLRPHSSSVTSVLFQANERLMSGLSVGIVKMWVLQTERDLPLIRL----------FGRLFITNLQSIPN-DSLDTQG 74 (323)
T ss_pred CeeEeccccchheehhhccchhhhcccccceEEEEEeecCccchhhhh----------hccceeeceeecCC-cchhhcC
Confidence 345677999999998 44556799999999999999999887776652 45678888988887 5777888
Q ss_pred cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCC-----C---CEEEEEcCCC-cEEEEeCCCCeehhhh---hhcccc
Q psy14906 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDG-----P---PMMVSGSNTG-HLTVWNLEDRQVENQI---KKAHRK 249 (583)
Q Consensus 182 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~---~~l~s~~~dg-~i~vwd~~~~~~~~~~---~~~~~~ 249 (583)
.|+.+.+|++..+..+. .|.-.++++-|.+.. + .+++.-++.. .+++-|......+... ..+..+
T Consensus 75 Rd~~L~lw~ia~s~~i~---i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klg 151 (323)
T KOG0322|consen 75 RDPLLILWTIAYSAFIS---IHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLG 151 (323)
T ss_pred CCceEEEEEccCcceEE---EeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccC
Confidence 99999999997654433 233445555554421 1 1222211110 1222222211111111 023345
Q ss_pred ceEEEEEecC-CC--EEEEEeCCCeEEEEEccCCCC------CceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEE
Q psy14906 250 VVTGAHFLYN-EP--LLVTSSPDNTLKLWIFDKADG------NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLR 320 (583)
Q Consensus 250 ~v~~~~~~~~-~~--~l~s~~~d~~i~~w~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 320 (583)
.+.+..+..+ +. +++.|-++|.+.+||+...+. ..+.......|..+|.++.|.+ .-..=++++.+..+.
T Consensus 152 svmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas-~~~rGisgga~dkl~ 230 (323)
T KOG0322|consen 152 SVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYAS-SCDRGISGGADDKLV 230 (323)
T ss_pred ceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeech-hhcCCcCCCccccce
Confidence 6666664322 22 567788899999998865321 1133334556899999999986 445567777777888
Q ss_pred EEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccce
Q psy14906 321 IFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDM 400 (583)
Q Consensus 321 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 400 (583)
.|++......-.+..
T Consensus 231 ~~Sl~~s~gslq~~~----------------------------------------------------------------- 245 (323)
T KOG0322|consen 231 MYSLNHSTGSLQIRK----------------------------------------------------------------- 245 (323)
T ss_pred eeeeccccCcccccc-----------------------------------------------------------------
Confidence 888764321110000
Q ss_pred eeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecC
Q psy14906 401 FLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGND 480 (583)
Q Consensus 401 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 480 (583)
........+..+.+-||++.+|+++.|+.|++|+.++.+.+..+ .-|...|++++|+|+..++|.++.|
T Consensus 246 ------e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVL-----kyHsagvn~vAfspd~~lmAaaskD 314 (323)
T KOG0322|consen 246 ------EITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVL-----KYHSAGVNAVAFSPDCELMAAASKD 314 (323)
T ss_pred ------eEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhh-----hhhhcceeEEEeCCCCchhhhccCC
Confidence 00000145778899999999999999999999999999999998 7899999999999999999999999
Q ss_pred CcEEEEEc
Q psy14906 481 QTVKVWHF 488 (583)
Q Consensus 481 g~i~iwd~ 488 (583)
++|.+|++
T Consensus 315 ~rISLWkL 322 (323)
T KOG0322|consen 315 ARISLWKL 322 (323)
T ss_pred ceEEeeec
Confidence 99999986
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.1e-20 Score=165.91 Aligned_cols=269 Identities=18% Similarity=0.263 Sum_probs=194.0
Q ss_pred EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC--------CeehhhhhhccccceEEEEEecCCCEEEEEeCC
Q psy14906 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED--------RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD 269 (583)
Q Consensus 198 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 269 (583)
.++..|...++.++|.|... .|++++.||.+.+|+++. -+++.++ .+|.++|.|+++.+++..+++|+-|
T Consensus 288 ~tl~s~~d~ir~l~~~~sep-~lit~sed~~lk~WnLqk~~~s~~~~~epi~tf-raH~gPVl~v~v~~n~~~~ysgg~D 365 (577)
T KOG0642|consen 288 FTLRSHDDCIRALAFHPSEP-VLITASEDGTLKLWNLQKAKKSAEKDVEPILTF-RAHEGPVLCVVVPSNGEHCYSGGID 365 (577)
T ss_pred eeeecchhhhhhhhcCCCCC-eEEEeccccchhhhhhcccCCccccceeeeEEE-ecccCceEEEEecCCceEEEeeccC
Confidence 35667888999999999888 899999999999999932 2567778 8999999999999999999999999
Q ss_pred CeEEEEEccCCCC------CceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhh
Q psy14906 270 NTLKLWIFDKADG------NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNL 343 (583)
Q Consensus 270 ~~i~~w~~~~~~~------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 343 (583)
|+|+.|++..... .......+.||.+.|..+++++ ..++|++++.||+++.|+...... ..++....
T Consensus 366 g~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~-~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e----- 438 (577)
T KOG0642|consen 366 GTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSS-TKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKE----- 438 (577)
T ss_pred ceeeeeccCCCCCcccccCcchhccceeccccceeeeeecc-cccceeeecCCceEEeeccCCcCc-cccCCccc-----
Confidence 9999996642110 1234466889999999999997 688899999999999999876543 11110000
Q ss_pred hhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC
Q psy14906 344 KRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC 423 (583)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 423 (583)
.....++.+-..
T Consensus 439 --------------------------------------------------------------------~g~Plsvd~~ss 450 (577)
T KOG0642|consen 439 --------------------------------------------------------------------HGYPLSVDRTSS 450 (577)
T ss_pred --------------------------------------------------------------------cCCcceEeeccc
Confidence 022233333222
Q ss_pred C-cEEEEEecCceEEEEEcccCccccccCCCCC--CCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEE-e
Q psy14906 424 G-NFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQ--PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS-I 499 (583)
Q Consensus 424 ~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~ 499 (583)
. ...++....+.-.+++.........+..... ......+..+.++|...+.+++..|+.|+++|..++ .++.. .
T Consensus 451 ~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~--~~l~s~~ 528 (577)
T KOG0642|consen 451 RPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTG--KILHSMV 528 (577)
T ss_pred hhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceeccccccc--ccchhee
Confidence 2 1122222222223333333333333321100 122345778889999999999999999999999988 66654 4
Q ss_pred eccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeeccccc
Q psy14906 500 KLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMG 545 (583)
Q Consensus 500 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~ 545 (583)
.+...++++++.|+|-+|++++.|+.+++|.+....++.....|..
T Consensus 529 a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es~~~r~ 574 (577)
T KOG0642|consen 529 AHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLESTAHRK 574 (577)
T ss_pred eccceecceeecCCCceEEeecCCceeehhhccchheeeccccccc
Confidence 5567899999999999999999999999999987777766666643
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.5e-18 Score=155.65 Aligned_cols=322 Identities=18% Similarity=0.177 Sum_probs=199.8
Q ss_pred EEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccC
Q psy14906 125 ISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTW 204 (583)
Q Consensus 125 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~ 204 (583)
++-..++.|.+.|..+.+.+.++. .....-..+.|+|||+++.+++.||.|.++|+.+++.+.++...
T Consensus 10 V~~~~~~~v~viD~~t~~~~~~i~-----------~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G- 77 (369)
T PF02239_consen 10 VVERGSGSVAVIDGATNKVVARIP-----------TGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVG- 77 (369)
T ss_dssp EEEGGGTEEEEEETTT-SEEEEEE------------STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-S-
T ss_pred EEecCCCEEEEEECCCCeEEEEEc-----------CCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecC-
Confidence 344568999999999999999997 33344455789999999999999999999999999999999876
Q ss_pred CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhc------cccceEEEEEecCCCEEEEEeCC-CeEEEEEc
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA------HRKVVTGAHFLYNEPLLVTSSPD-NTLKLWIF 277 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~s~~~d-~~i~~w~~ 277 (583)
....++++++||++++++...++.+.++|.++.+.++.+..+ ....+.++..+|....++..-.| +.|-+-
T Consensus 78 ~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vV-- 155 (369)
T PF02239_consen 78 GNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVV-- 155 (369)
T ss_dssp SEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEE--
T ss_pred CCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEE--
Confidence 567889999999955555567899999999999888876322 23467788888888866655554 655444
Q ss_pred cCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEe-eCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcccccc
Q psy14906 278 DKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSA-AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKF 356 (583)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (583)
+...........+. .........|.| ++++++.+ ..+..+-++|..+++....+.
T Consensus 156 dy~d~~~~~~~~i~-~g~~~~D~~~dp-dgry~~va~~~sn~i~viD~~~~k~v~~i~---------------------- 211 (369)
T PF02239_consen 156 DYSDPKNLKVTTIK-VGRFPHDGGFDP-DGRYFLVAANGSNKIAVIDTKTGKLVALID---------------------- 211 (369)
T ss_dssp ETTTSSCEEEEEEE---TTEEEEEE-T-TSSEEEEEEGGGTEEEEEETTTTEEEEEEE----------------------
T ss_pred Eeccccccceeeec-ccccccccccCc-ccceeeecccccceeEEEeeccceEEEEee----------------------
Confidence 44332222222222 234556777876 67766554 345577777766543322110
Q ss_pred CCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceE
Q psy14906 357 ILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHV 436 (583)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 436 (583)
T Consensus 212 -------------------------------------------------------------------------------- 211 (369)
T PF02239_consen 212 -------------------------------------------------------------------------------- 211 (369)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEcccCccccccCCCCCCCcccCeeEE-------EE--eCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeee
Q psy14906 437 DRFNIQSGAHRGSYGHDNQPGHVGGVRGV-------VS--DNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF 507 (583)
Q Consensus 437 ~i~d~~~~~~~~~~~~~~~~~h~~~v~~~-------~~--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~ 507 (583)
.++ ..|..+...+ .| ...+...++.-....+.+||.... +.++.+...+.-..
T Consensus 212 ------~g~----------~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~w--kvv~~I~~~G~glF 273 (369)
T PF02239_consen 212 ------TGK----------KPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAW--KVVKTIPTQGGGLF 273 (369)
T ss_dssp -------SS----------SBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBT--SEEEEEE-SSSS--
T ss_pred ------ccc----------cccccccccccCCCcceEEeeccccceecccccCCccccchhhcC--eEEEEEECCCCcce
Confidence 000 0111111111 11 112222322222345667888887 88898888776688
Q ss_pred EEeccCCcEEEEE----eCCceEEEEEccccceEEeecccc-cceeeEEecCCCcEEEEEeCC--CeEEEEeCCCccccc
Q psy14906 508 FRTHQESSMLAVC----LDDFTVNIIDIDTCTIIRKLSGHM-GQLTDADFSPDSRWLITASMD--CTIRVWDIPSSQLID 580 (583)
Q Consensus 508 ~~~s~~~~~l~~~----~~dg~i~i~d~~~~~~~~~~~~h~-~~v~~l~~s~d~~~l~s~~~d--~~i~vw~~~~~~~~~ 580 (583)
+..+|+++++.+. ...++|.++|.++.+.+..+.... ..+..+.|++||+++..+..+ +.|.+||..|.++++
T Consensus 274 i~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~ 353 (369)
T PF02239_consen 274 IKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKK 353 (369)
T ss_dssp EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEE
T ss_pred eecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEE
Confidence 8999999999998 445899999999998887775322 358999999999987655433 379999999999887
Q ss_pred cc
Q psy14906 581 CF 582 (583)
Q Consensus 581 ~~ 582 (583)
.+
T Consensus 354 ~i 355 (369)
T PF02239_consen 354 RI 355 (369)
T ss_dssp EE
T ss_pred EE
Confidence 65
|
... |
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.6e-18 Score=169.62 Aligned_cols=222 Identities=16% Similarity=0.162 Sum_probs=163.0
Q ss_pred EeccceeeeeecccCccEEEE---ccCCCEEEEEeCCCcEEEEEcCCC-------cEEEEeeccCCceEEecccCCcceE
Q psy14906 97 WRRGIDIVGTYKGHTSPVHLI---LPFGPHLISVDEESNVKVWDIKAE-------ETYLELSFDNDTFKIMGKRWNSCVN 166 (583)
Q Consensus 97 w~~~~~~~~~~~~h~~~v~~i---s~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~ 166 (583)
|++.|..+..+..|+..|..+ ++++.+++||+.||+|++||...- +...++. .....+.
T Consensus 1034 W~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys-----------~~~sr~~ 1102 (1431)
T KOG1240|consen 1034 WNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYS-----------PEGSRVE 1102 (1431)
T ss_pred CCccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEe-----------ccCCceE
Confidence 888999999999999999876 667799999999999999998752 1222332 3578899
Q ss_pred EEeeCCCCCEEEEEecCCeEEEEEccCC--ce-----eEEE--eccCCCeEEEEEecCCCC-EEEEEcCCCcEEEEeCCC
Q psy14906 167 VLEPSPVVDIIGVGLSNKKIILHNILTD--ES-----LMEF--IQTWGPVTALSFRTDGPP-MMVSGSNTGHLTVWNLED 236 (583)
Q Consensus 167 ~~~~s~~~~~l~~~~~d~~i~iw~~~~~--~~-----~~~~--~~~~~~v~~~~~~~~~~~-~l~s~~~dg~i~vwd~~~ 236 (583)
++.+.+.++.+|+++.||.|++.++.-. +. .... .....-|..-+|...... .++.+...+.|..||+..
T Consensus 1103 ~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~ 1182 (1431)
T KOG1240|consen 1103 KVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRM 1182 (1431)
T ss_pred EEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchh
Confidence 9999999999999999999999998752 11 1111 122223444456554443 788888899999999998
Q ss_pred Ceehhhhhh-ccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEE-eccCCCCCeeEEEeeCCC--CEEEE
Q psy14906 237 RQVENQIKK-AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI-REGHSAPPNYIQFYGNSS--DNILS 312 (583)
Q Consensus 237 ~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~--~~l~~ 312 (583)
......+.. ...+.|++++.+|.+++++.|...|.+.+||+.-. .++.. -..+..++..+..+|..+ ...++
T Consensus 1183 ~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~----~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs 1258 (1431)
T KOG1240|consen 1183 RHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFR----VPILSWEHPARAPIRHVWLCPTYPQESVSVS 1258 (1431)
T ss_pred hhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecC----ceeecccCcccCCcceEEeeccCCCCceEEE
Confidence 766665521 23468999999999999999999999999987632 22222 223457888888776433 45555
Q ss_pred ee--CCCcEEEEEccccccceee
Q psy14906 313 AA--GDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 313 ~~--~dg~i~iwd~~~~~~~~~~ 333 (583)
++ ..+.+.+|++.++.+...+
T Consensus 1259 ~~~~~~nevs~wn~~~g~~~~vl 1281 (1431)
T KOG1240|consen 1259 AGSSSNNEVSTWNMETGLRQTVL 1281 (1431)
T ss_pred ecccCCCceeeeecccCcceEEE
Confidence 44 4688999999998665544
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-18 Score=164.69 Aligned_cols=281 Identities=19% Similarity=0.225 Sum_probs=194.2
Q ss_pred CcEEEEeCCCC-eehhhhhhccccceEEEEEecC-CCEEEEEeCCCeEEEEEccCCCCC--ceeeEEeccCCCCCeeEEE
Q psy14906 227 GHLTVWNLEDR-QVENQIKKAHRKVVTGAHFLYN-EPLLVTSSPDNTLKLWIFDKADGN--GRLLRIREGHSAPPNYIQF 302 (583)
Q Consensus 227 g~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~~w~~~~~~~~--~~~~~~~~~~~~~v~~~~~ 302 (583)
+.+.+|++.+. .+...+ .....|+++.|+|. .++++.|..+|.|.+||+...... ...-.....|..++..+.|
T Consensus 222 ~~~~vW~~~~p~~Pe~~~--~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW 299 (555)
T KOG1587|consen 222 GVLLVWSLKNPNTPELVL--ESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVW 299 (555)
T ss_pred ceEEEEecCCCCCceEEE--ecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEE
Confidence 47999999876 333333 45789999999996 457788888999999977644321 1122334568889999999
Q ss_pred eeCCC--CEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEE
Q psy14906 303 YGNSS--DNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAI 380 (583)
Q Consensus 303 ~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (583)
.. +. .-+++++.||.|..|+++.-...........
T Consensus 300 ~~-~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~------------------------------------------ 336 (555)
T KOG1587|consen 300 LQ-NEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLES------------------------------------------ 336 (555)
T ss_pred ec-cCCCCceEEEecCCcEeeeeccccccchhhccccc------------------------------------------
Confidence 85 33 4599999999999998765433111100000
Q ss_pred ecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC-CcEEEEEecCceEEEEEcccCcccc--cc-CCCCCC
Q psy14906 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC-GNFVLIGYSSGHVDRFNIQSGAHRG--SY-GHDNQP 456 (583)
Q Consensus 381 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~--~~-~~~~~~ 456 (583)
.............++++.|.+. -..+++|++.|.|..-+........ .+ ......
T Consensus 337 ---------------------~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~ 395 (555)
T KOG1587|consen 337 ---------------------KKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFI 395 (555)
T ss_pred ---------------------ccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCccccccccccccccc
Confidence 0000000011156888999885 5779999999999885544322222 00 011126
Q ss_pred CcccCeeEEEEeCCCcEEEEeecCCcEEEEEcc-CCCCCceEEee-ccCCeeeEEeccCCc-EEEEEeCCceEEEEEccc
Q psy14906 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFK-QTGKPPLRSIK-LDNGISFFRTHQESS-MLAVCLDDFTVNIIDIDT 533 (583)
Q Consensus 457 ~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~ 533 (583)
.|.+.|+++.++|-+..++..+.|-+++||.-. .. .++..+. ....+++++|||-.. .+|++..||.+.+||+..
T Consensus 396 ~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~--~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~ 473 (555)
T KOG1587|consen 396 THIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIA--SPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQ 473 (555)
T ss_pred ccCcceEeeecCCCccceeeeeccceeEeccccCCC--CcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhc
Confidence 789999999999987655555559999999987 44 4554444 445699999999776 677788899999999964
Q ss_pred --cceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCC
Q psy14906 534 --CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575 (583)
Q Consensus 534 --~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~ 575 (583)
.+++...+-+....+.+.|+++|+.|+.|...|++.+|++..
T Consensus 474 ~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 474 DDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred cccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 345555555567778889999999999999999999999964
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.3e-20 Score=161.64 Aligned_cols=311 Identities=14% Similarity=0.168 Sum_probs=234.8
Q ss_pred ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecC--CCEEEEEeCCCeE
Q psy14906 195 ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN--EPLLVTSSPDNTL 272 (583)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~i 272 (583)
.....+..|.+.|..+.|+..|. .|++|+.|..|.+||...++....+..+|...|....|-|. ...+++++.||.+
T Consensus 133 ~l~~kL~~H~GcVntV~FN~~Gd-~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqv 211 (559)
T KOG1334|consen 133 RLQKKLNKHKGCVNTVHFNQRGD-VLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQV 211 (559)
T ss_pred hhhhcccCCCCccceeeecccCc-eeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCce
Confidence 34456789999999999999999 99999999999999999999998888899999888888774 4579999999999
Q ss_pred EEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcc
Q psy14906 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKM 352 (583)
Q Consensus 273 ~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (583)
++=.+.... ...-...+..|.++|..++.-|.+...|++++.|+.+.-+|++.+.....+.
T Consensus 212 r~s~i~~t~-~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~------------------ 272 (559)
T KOG1334|consen 212 RVSEILETG-YVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFV------------------ 272 (559)
T ss_pred eeeeecccc-ceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceee------------------
Confidence 998665432 2233456677999999999999888999999999999999988765433221
Q ss_pred ccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCc-EEEEEe
Q psy14906 353 NEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGN-FVLIGY 431 (583)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~ 431 (583)
+...+... .-....++..|... .+++|+
T Consensus 273 ---------------------------cr~~~~~~------------------------~v~L~~Ia~~P~nt~~faVgG 301 (559)
T KOG1334|consen 273 ---------------------------CREADEKE------------------------RVGLYTIAVDPRNTNEFAVGG 301 (559)
T ss_pred ---------------------------eeccCCcc------------------------ceeeeeEecCCCCccccccCC
Confidence 11011000 02456777888654 889999
Q ss_pred cCceEEEEEcccCcc------ccccCCCCC-CCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCC----------C
Q psy14906 432 SSGHVDRFNIQSGAH------RGSYGHDNQ-PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK----------P 494 (583)
Q Consensus 432 ~dg~i~i~d~~~~~~------~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~----------~ 494 (583)
.|..+++||.+.-.. +..+....+ ....-.|++++|+.++.-|.++-.|-.|+++.-..+.. .
T Consensus 302 ~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~ 381 (559)
T KOG1334|consen 302 SDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQ 381 (559)
T ss_pred hhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhh
Confidence 999999999764322 223321100 13345799999998777666666777899985433221 1
Q ss_pred ceEE-eecc---CCeeeEE-eccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEE
Q psy14906 495 PLRS-IKLD---NGISFFR-THQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIR 569 (583)
Q Consensus 495 ~~~~-~~~~---~~v~~~~-~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~ 569 (583)
.+.. ++.+ ..|..+- |-|...|+++|++-|.|.||+-.+++.+..+++...-|+||.=+|--..||+++-|..||
T Consensus 382 ~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVK 461 (559)
T KOG1334|consen 382 YVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVK 461 (559)
T ss_pred ccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCcccee
Confidence 1111 2322 2466664 468889999999999999999999999999988777999999999999999999999999
Q ss_pred EEeCCCc
Q psy14906 570 VWDIPSS 576 (583)
Q Consensus 570 vw~~~~~ 576 (583)
||.-.+.
T Consensus 462 IWTP~~~ 468 (559)
T KOG1334|consen 462 IWTPLTA 468 (559)
T ss_pred eecCCcc
Confidence 9987443
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.1e-19 Score=152.90 Aligned_cols=313 Identities=13% Similarity=0.092 Sum_probs=215.7
Q ss_pred eeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEE
Q psy14906 103 IVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG 180 (583)
Q Consensus 103 ~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 180 (583)
+.+.+.+|.+.|+++ |.++++||+|+.|..+++|+++..-..++ +.+..+.+..|...|.|++|....+.|.+|
T Consensus 48 ~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~----~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG 123 (609)
T KOG4227|consen 48 CQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKT----PKPIGVMEHPHRSNIFSLEFDLENRFLYSG 123 (609)
T ss_pred hhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcC----CCCceeccCccccceEEEEEccCCeeEecC
Confidence 455677999999997 88999999999999999999875321111 112222233677999999999999999999
Q ss_pred ecCCeEEEEEccCCceeEEEecc--CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe-ehhhh-hhccccceEEEEE
Q psy14906 181 LSNKKIILHNILTDESLMEFIQT--WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ-VENQI-KKAHRKVVTGAHF 256 (583)
Q Consensus 181 ~~d~~i~iw~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~-~~~~~~~v~~~~~ 256 (583)
..+++|.+.|+++.+.+..+... .+.|+.+.-+|..+ .|++.+.++.|.+||.+... ....+ ..........+.|
T Consensus 124 ~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN-~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F 202 (609)
T KOG4227|consen 124 ERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDN-TLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEF 202 (609)
T ss_pred CCcceeEeeecccceeeeeecccCcccceeecccCCCCc-eEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeee
Confidence 99999999999999888877643 36899999999977 89999999999999998654 21111 1234556788899
Q ss_pred ecCCC-EEEEEeCCCeEEEEEccCCCCCceeeEEeccC---CCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccccccee
Q psy14906 257 LYNEP-LLVTSSPDNTLKLWIFDKADGNGRLLRIREGH---SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKN 332 (583)
Q Consensus 257 ~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 332 (583)
+|... +|++.+..+-+.+||+............+.+. ...-.++.|+| +|..+++.-....-.+||+....+.-
T Consensus 203 ~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~-~G~Q~msiRR~~~P~~~D~~S~R~~V- 280 (609)
T KOG4227|consen 203 HPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSP-SGNQFMSIRRGKCPLYFDFISQRCFV- 280 (609)
T ss_pred cCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCC-CCCeehhhhccCCCEEeeeeccccee-
Confidence 99764 67788888889999776432211111111121 22336778997 78888877665556677765533211
Q ss_pred eccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCC
Q psy14906 333 LGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQ 412 (583)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (583)
+.....+.+. .. .
T Consensus 281 ---------------------------------------------------------~k~D~N~~GY--------~N--~ 293 (609)
T KOG4227|consen 281 ---------------------------------------------------------LKSDHNPNGY--------CN--I 293 (609)
T ss_pred ---------------------------------------------------------EeccCCCCcc--------ee--e
Confidence 0000000000 00 0
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCcccccc------------------CCCCCCCcccCeeEEEEeCCCcEE
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY------------------GHDNQPGHVGGVRGVVSDNLNQIV 474 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~------------------~~~~~~~h~~~v~~~~~s~~~~~l 474 (583)
..+.+++|..|- .+++|+.+-.|++|.+.......-+ ....+.+|..-+..+.|+|...+|
T Consensus 294 ~T~KS~~F~~D~-~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~H~~~l 372 (609)
T KOG4227|consen 294 KTIKSMTFIDDY-TVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQHNNLL 372 (609)
T ss_pred eeeeeeeeecce-eeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEecccccccceeecCCcceE
Confidence 345667776554 4888998888999987532111100 011227899999999999999999
Q ss_pred EEeecCCcEEEEEccC
Q psy14906 475 ISGGNDQTVKVWHFKQ 490 (583)
Q Consensus 475 ~s~~~dg~i~iwd~~~ 490 (583)
++.+-.+.++||.-..
T Consensus 373 ~SSGVE~~~KlWS~~r 388 (609)
T KOG4227|consen 373 VSSGVENSFKLWSDHR 388 (609)
T ss_pred eccchhhheecccccc
Confidence 9999999999997543
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-17 Score=140.55 Aligned_cols=319 Identities=10% Similarity=0.079 Sum_probs=210.9
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC--CeEEEEEccCCc
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN--KKIILHNILTDE 195 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--~~i~iw~~~~~~ 195 (583)
..+...|..|+.|| .++++.+.-+...... .....|.-+-|+. .++|..+.+ ..+++++.+.+.
T Consensus 14 Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~-----------~~~~~IvEmLFSS--SLvaiV~~~qpr~Lkv~~~Kk~~ 79 (391)
T KOG2110|consen 14 NQDSTLLSVGSKDG-YKIFSCSPFEKCFSKD-----------TEGVSIVEMLFSS--SLVAIVSIKQPRKLKVVHFKKKT 79 (391)
T ss_pred ccceeEEEccCCCc-eeEEecCchHHhhccc-----------CCCeEEEEeeccc--ceeEEEecCCCceEEEEEcccCc
Confidence 45556677777776 5777776644422222 3455666777774 456655544 459999999999
Q ss_pred eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhc--cccceEEEEEecCCCEEEEEe--CCCe
Q psy14906 196 SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA--HRKVVTGAHFLYNEPLLVTSS--PDNT 271 (583)
Q Consensus 196 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~--~d~~ 271 (583)
.++.+... .+|.++.++.+ .|+++-.+ .|.|||+.+.+++.++... +...+.++.+++.+.+++.-+ ..|.
T Consensus 80 ~ICe~~fp-t~IL~VrmNr~---RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~Gd 154 (391)
T KOG2110|consen 80 TICEIFFP-TSILAVRMNRK---RLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGD 154 (391)
T ss_pred eEEEEecC-CceEEEEEccc---eEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCce
Confidence 99998877 79999999876 35555544 4999999999999998543 455677777777777888643 3589
Q ss_pred EEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCc-EEEEEccccccceeeccchhhhhhhhhhcchh
Q psy14906 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDST-LRIFNTKSETSNKNLGIASANRNNLKRKNRLE 350 (583)
Q Consensus 272 i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (583)
|.+||.. +.+....+..|.+++.+++|++ +|.+|++++..|+ ||++.+.+++...++..+..
T Consensus 155 V~l~d~~----nl~~v~~I~aH~~~lAalafs~-~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~------------ 217 (391)
T KOG2110|consen 155 VVLFDTI----NLQPVNTINAHKGPLAALAFSP-DGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTY------------ 217 (391)
T ss_pred EEEEEcc----cceeeeEEEecCCceeEEEECC-CCCEEEEeccCceEEEEEEcCCccEeeeeeCCce------------
Confidence 9999765 6778888899999999999997 8999999999987 68999999887776643321
Q ss_pred ccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEE
Q psy14906 351 KMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIG 430 (583)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 430 (583)
...|.+++|+|++++|++.
T Consensus 218 -------------------------------------------------------------~~~IySL~Fs~ds~~L~~s 236 (391)
T KOG2110|consen 218 -------------------------------------------------------------PVSIYSLSFSPDSQFLAAS 236 (391)
T ss_pred -------------------------------------------------------------eeEEEEEEECCCCCeEEEe
Confidence 0468999999999999999
Q ss_pred ecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccC--CeeeE
Q psy14906 431 YSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN--GISFF 508 (583)
Q Consensus 431 ~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~v~~~ 508 (583)
++.++|++|.++.... ..... .....- .+.+-.+.+.+--..+.-.+||.... -....+...+ .+..+
T Consensus 237 S~TeTVHiFKL~~~~~-~~~~~----p~~~~~---~~~~~sk~~~sylps~V~~~~~~~R~--FAt~~l~~s~~~~~~~l 306 (391)
T KOG2110|consen 237 SNTETVHIFKLEKVSN-NPPES----PTAGTS---WFGKVSKAATSYLPSQVSSVLDQSRK--FATAKLPESGRKNICSL 306 (391)
T ss_pred cCCCeEEEEEeccccc-CCCCC----CCCCCc---ccchhhhhhhhhcchhhhhhhhhccc--eeEEEccCCCccceEEe
Confidence 9999999999876541 11100 000000 00000010110000111223554432 1112222222 33333
Q ss_pred EeccCCcEEEEEeCCceEEEEEccc--cceEEeeccc
Q psy14906 509 RTHQESSMLAVCLDDFTVNIIDIDT--CTIIRKLSGH 543 (583)
Q Consensus 509 ~~s~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~h 543 (583)
.-.+....+.+++.||.++.|.+.. |.....++.|
T Consensus 307 ~~~~~~~~v~vas~dG~~y~y~l~~~~gGec~lik~h 343 (391)
T KOG2110|consen 307 SSIQKIPRVLVASYDGHLYSYRLPPKEGGECALIKRH 343 (391)
T ss_pred eccCCCCEEEEEEcCCeEEEEEcCCCCCceeEEEEee
Confidence 3335778999999999999998753 4433334433
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-18 Score=165.65 Aligned_cols=283 Identities=16% Similarity=0.272 Sum_probs=204.0
Q ss_pred cCcccEEEEEeCCCceEEEEee-CCeEEEEecCCcEEEeecCC---CCCCeEEEEe-e----CeEEEEEcCCeEEEEec-
Q psy14906 30 NHLPVVARFIRRRKETLFVTCV-GKAFHVYGCNHFKLLSVSPQ---HEDDITCLSS-D----FFHIYTSANNIIYAWRR- 99 (583)
Q Consensus 30 ~~~~~~~~~~p~~~~~~i~~~~-~~~i~v~d~~~~~~~~~~~~---h~~~v~~~~~-~----~~~~~~~~~~~i~vw~~- 99 (583)
+..|..+.|+|-.+. ++++. ...|+|||.+.++++..+.. ....|+.+.+ + .-+++++.||.|+||+-
T Consensus 1064 ~~~pk~~~~hpf~p~--i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y 1141 (1387)
T KOG1517|consen 1064 NQPPKTLKFHPFEPQ--IAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDY 1141 (1387)
T ss_pred CCCCceeeecCCCce--eEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEeccc
Confidence 346888999988766 44444 56899999999999877754 4567888887 2 25889999999999983
Q ss_pred -c----ceeeeeecc---c------CccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcce
Q psy14906 100 -G----IDIVGTYKG---H------TSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCV 165 (583)
Q Consensus 100 -~----~~~~~~~~~---h------~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i 165 (583)
. .+.+.-+.+ + .+-|...-....+|+++|.-..|+|||......+..+.+ +....|
T Consensus 1142 ~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~----------~s~t~v 1211 (1387)
T KOG1517|consen 1142 ADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPY----------GSSTLV 1211 (1387)
T ss_pred ccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeeccc----------CCCccc
Confidence 2 133332221 1 122333334445666666688999999999888888875 556677
Q ss_pred EEEeeCC-CCCEEEEEecCCeEEEEEccCC---ceeEEEeccCCC--eEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 166 NVLEPSP-VVDIIGVGLSNKKIILHNILTD---ESLMEFIQTWGP--VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 166 ~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~--v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
+++.-+. .|+.+++|..||.|++||.+.. ..+...+.|... |..+.+.+.|-.-|++|+.+|.|++||++....
T Consensus 1212 TaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~ 1291 (1387)
T KOG1517|consen 1212 TALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSK 1291 (1387)
T ss_pred eeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcc
Confidence 7776553 4799999999999999998754 356677788777 999999998765699999999999999987422
Q ss_pred hhhhh-hccc--c-ceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEE----eccCCCCCeeEEEeeCCCCEEE
Q psy14906 240 ENQIK-KAHR--K-VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI----REGHSAPPNYIQFYGNSSDNIL 311 (583)
Q Consensus 240 ~~~~~-~~~~--~-~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~ 311 (583)
...+. ..|. + ..+++..+++...+|+|+. +.|+||++..+ ....++. +....+.+.+++|+| -.-+++
T Consensus 1292 e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~--~l~~~k~n~~F~~q~~gs~scL~FHP-~~~llA 1367 (1387)
T KOG1517|consen 1292 ETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGE--QLNIIKYNPGFMGQRIGSVSCLAFHP-HRLLLA 1367 (1387)
T ss_pred cccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChh--hhcccccCcccccCcCCCcceeeecc-hhHhhh
Confidence 21110 2222 3 5899999999999999988 99999977432 1111111 112235679999998 466888
Q ss_pred EeeCCCcEEEEEccccc
Q psy14906 312 SAAGDSTLRIFNTKSET 328 (583)
Q Consensus 312 ~~~~dg~i~iwd~~~~~ 328 (583)
+|+.|.+|.+|......
T Consensus 1368 aG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1368 AGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred hccCCceEEEeecCCcC
Confidence 89999999999876543
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.1e-18 Score=138.27 Aligned_cols=246 Identities=16% Similarity=0.229 Sum_probs=179.0
Q ss_pred ceEEEEEecCCCEEEEEeCCCeEEEEEccCC------CCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEE
Q psy14906 250 VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA------DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323 (583)
Q Consensus 250 ~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd 323 (583)
.|.+-+++|.+++|+.|..+|.|.++.+... ......+...++|.++++.++|. ..+|++++ ||.|+-|.
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~---d~~Lls~g-dG~V~gw~ 87 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH---DDFLLSGG-DGLVYGWE 87 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee---hhheeecc-CceEEEee
Confidence 4556678999999999999999999977431 11233455568999999999997 34677666 49999998
Q ss_pred ccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeee
Q psy14906 324 TKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLV 403 (583)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 403 (583)
.+....... .-++|+........
T Consensus 88 W~E~~es~~-----------------------------------------------------~K~lwe~~~P~~~~---- 110 (325)
T KOG0649|consen 88 WNEEEESLA-----------------------------------------------------TKRLWEVKIPMQVD---- 110 (325)
T ss_pred ehhhhhhcc-----------------------------------------------------chhhhhhcCccccC----
Confidence 765332110 11122222111100
Q ss_pred cccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcE
Q psy14906 404 PERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTV 483 (583)
Q Consensus 404 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i 483 (583)
...-..|.++.+.|..+-++.++.|+.++-||+++|+....+ ++|+..|.++.--.....+++|++||++
T Consensus 111 -----~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~-----rGHtDYvH~vv~R~~~~qilsG~EDGtv 180 (325)
T KOG0649|consen 111 -----AVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREY-----RGHTDYVHSVVGRNANGQILSGAEDGTV 180 (325)
T ss_pred -----cccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEE-----cCCcceeeeeeecccCcceeecCCCccE
Confidence 001146889999998888877779999999999999999999 8999999999985555678999999999
Q ss_pred EEEEccCCCCCceEEeeccC-----------CeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEe
Q psy14906 484 KVWHFKQTGKPPLRSIKLDN-----------GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADF 552 (583)
Q Consensus 484 ~iwd~~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~ 552 (583)
++||.++. +.+..++.-. .|.++ .-+..+|++|+. ..+.+|++.+.++...+. -.+++..+.|
T Consensus 181 RvWd~kt~--k~v~~ie~yk~~~~lRp~~g~wigal--a~~edWlvCGgG-p~lslwhLrsse~t~vfp-ipa~v~~v~F 254 (325)
T KOG0649|consen 181 RVWDTKTQ--KHVSMIEPYKNPNLLRPDWGKWIGAL--AVNEDWLVCGGG-PKLSLWHLRSSESTCVFP-IPARVHLVDF 254 (325)
T ss_pred EEEecccc--ceeEEeccccChhhcCcccCceeEEE--eccCceEEecCC-CceeEEeccCCCceEEEe-cccceeEeee
Confidence 99999998 7777765322 23333 345667777654 479999999988887776 4567888889
Q ss_pred cCCCcEEEEEeCCCeEEEEeCC
Q psy14906 553 SPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 553 s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
-. ..++++++.+.|.-|.+.
T Consensus 255 ~~--d~vl~~G~g~~v~~~~l~ 274 (325)
T KOG0649|consen 255 VD--DCVLIGGEGNHVQSYTLN 274 (325)
T ss_pred ec--ceEEEeccccceeeeeec
Confidence 53 467778877788888764
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.8e-17 Score=140.25 Aligned_cols=229 Identities=14% Similarity=0.198 Sum_probs=175.9
Q ss_pred CCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeCeEE-EEEcC--CeEEEEeccceeeeeecccCccEEEE
Q psy14906 41 RRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHI-YTSAN--NIIYAWRRGIDIVGTYKGHTSPVHLI 117 (583)
Q Consensus 41 ~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~~~--~~i~vw~~~~~~~~~~~~h~~~v~~i 117 (583)
+.+..+++.+...-..+|+.+..............|.-+-|+..++ ..+.+ +.+++.+.......----...+|.++
T Consensus 14 Nqd~~~lsvGs~~Gyk~~~~~~~~k~~~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~fpt~IL~V 93 (391)
T KOG2110|consen 14 NQDSTLLSVGSKDGYKIFSCSPFEKCFSKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTTICEIFFPTSILAV 93 (391)
T ss_pred ccceeEEEccCCCceeEEecCchHHhhcccCCCeEEEEeecccceeEEEecCCCceEEEEEcccCceEEEEecCCceEEE
Confidence 5566677777777788888776544332233344455566655443 33433 36888886554333333445678888
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe--cCCeEEEEEccCCc
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL--SNKKIILHNILTDE 195 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~d~~i~iw~~~~~~ 195 (583)
--+-++|+++-.+ .|+|+|+.+.+.++++...+ .+...+.++.+++.+.+||.-+ ..|.|.+||..+-+
T Consensus 94 rmNr~RLvV~Lee-~IyIydI~~MklLhTI~t~~--------~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~ 164 (391)
T KOG2110|consen 94 RMNRKRLVVCLEE-SIYIYDIKDMKLLHTIETTP--------PNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQ 164 (391)
T ss_pred EEccceEEEEEcc-cEEEEecccceeehhhhccC--------CCccceEeeccCCCCceEEecCCCCCceEEEEEcccce
Confidence 7788888887654 49999999999999987432 3456677777777888998743 35899999999999
Q ss_pred eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCc-EEEEeCCCCeehhhhhhcc-ccceEEEEEecCCCEEEEEeCCCeEE
Q psy14906 196 SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGH-LTVWNLEDRQVENQIKKAH-RKVVTGAHFLYNEPLLVTSSPDNTLK 273 (583)
Q Consensus 196 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~-i~vwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~~i~ 273 (583)
.+..+..|++.+-+++|+++|. +||+++..|+ |||+.+.+|+.+.++++|- ...|.+++|+|++++|++.+..++|.
T Consensus 165 ~v~~I~aH~~~lAalafs~~G~-llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVH 243 (391)
T KOG2110|consen 165 PVNTINAHKGPLAALAFSPDGT-LLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVH 243 (391)
T ss_pred eeeEEEecCCceeEEEECCCCC-EEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEE
Confidence 9999999999999999999999 9999999998 7999999999999997664 34789999999999999999999999
Q ss_pred EEEccC
Q psy14906 274 LWIFDK 279 (583)
Q Consensus 274 ~w~~~~ 279 (583)
+|.++.
T Consensus 244 iFKL~~ 249 (391)
T KOG2110|consen 244 IFKLEK 249 (391)
T ss_pred EEEecc
Confidence 998764
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-18 Score=149.08 Aligned_cols=208 Identities=22% Similarity=0.273 Sum_probs=160.4
Q ss_pred eeeecccCccEEEE--cc-CCCEEEEEeCCCcEEEEEcCCCcE-------EEEeeccCCceEEecccCCcceEEEeeCCC
Q psy14906 104 VGTYKGHTSPVHLI--LP-FGPHLISVDEESNVKVWDIKAEET-------YLELSFDNDTFKIMGKRWNSCVNVLEPSPV 173 (583)
Q Consensus 104 ~~~~~~h~~~v~~i--s~-~~~~l~s~~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 173 (583)
...+.||+++|..+ .| +.+.||||+.|.+|.||++..+.. +..+. +|...|-.++|+|.
T Consensus 74 ~P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~-----------gH~rrVg~V~wHPt 142 (472)
T KOG0303|consen 74 YPLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELY-----------GHQRRVGLVQWHPT 142 (472)
T ss_pred CCCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEe-----------ecceeEEEEeeccc
Confidence 44567999999998 55 457899999999999999987543 34444 99999999999995
Q ss_pred -CCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhcccc-ce
Q psy14906 174 -VDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRK-VV 251 (583)
Q Consensus 174 -~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-~v 251 (583)
.+.|++++.|.+|.+||+.+|+.+.++. |.+.|+++.|+.||. +|++.+.|..|+|||.++++.+..- .+|.+ .-
T Consensus 143 A~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs-~l~TtckDKkvRv~dpr~~~~v~e~-~~heG~k~ 219 (472)
T KOG0303|consen 143 APNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGS-LLCTTCKDKKVRVIDPRRGTVVSEG-VAHEGAKP 219 (472)
T ss_pred chhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCc-eeeeecccceeEEEcCCCCcEeeec-ccccCCCc
Confidence 4678899999999999999999999988 889999999999999 9999999999999999999998887 67765 44
Q ss_pred EEEEEecCCCEEEEEe---CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEE-eeCCCcEEEEEcccc
Q psy14906 252 TGAHFLYNEPLLVTSS---PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILS-AAGDSTLRIFNTKSE 327 (583)
Q Consensus 252 ~~~~~~~~~~~l~s~~---~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~ 327 (583)
..+.|..++..+-||- .++.+-+||-+.-. ..-.+..+.. ...|.---|.+ |...++. |-.|+.|+.|.+...
T Consensus 220 ~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~-eP~~~~elDt-SnGvl~PFyD~-dt~ivYl~GKGD~~IRYyEit~d 296 (472)
T KOG0303|consen 220 ARAIFLASGKIFTTGFSRMSERQIALWDPNNLE-EPIALQELDT-SNGVLLPFYDP-DTSIVYLCGKGDSSIRYFEITNE 296 (472)
T ss_pred ceeEEeccCceeeeccccccccceeccCccccc-CcceeEEecc-CCceEEeeecC-CCCEEEEEecCCcceEEEEecCC
Confidence 5566888888544443 36789999543221 2223333432 33444444555 5566654 456999999998776
Q ss_pred c
Q psy14906 328 T 328 (583)
Q Consensus 328 ~ 328 (583)
.
T Consensus 297 ~ 297 (472)
T KOG0303|consen 297 P 297 (472)
T ss_pred C
Confidence 5
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.8e-18 Score=147.28 Aligned_cols=159 Identities=16% Similarity=0.300 Sum_probs=130.1
Q ss_pred ccCCcceEEEeeCC-CCCEEEEEecCCeEEEEEccCC-------ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEE
Q psy14906 159 KRWNSCVNVLEPSP-VVDIIGVGLSNKKIILHNILTD-------ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLT 230 (583)
Q Consensus 159 ~~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~ 230 (583)
.+|.++|..++|+| +...||+|+.|.+|.||.+..+ +++..+.+|...|.-++|+|.-..+|++++.|.+|.
T Consensus 78 ~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~ 157 (472)
T KOG0303|consen 78 CGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVS 157 (472)
T ss_pred cCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceEE
Confidence 39999999999999 5568899999999999998654 567788999999999999999887999999999999
Q ss_pred EEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCC-CCeeEEEeeCCCCE
Q psy14906 231 VWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA-PPNYIQFYGNSSDN 309 (583)
Q Consensus 231 vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~ 309 (583)
+||+.+++.+.++ . |.+.|.++.|+.||.+|++.+.|..|+|||.. .+..+....+|.+ ....+.|.. ++.
T Consensus 158 iWnv~tgeali~l-~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr----~~~~v~e~~~heG~k~~Raifl~-~g~- 229 (472)
T KOG0303|consen 158 IWNVGTGEALITL-D-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPR----RGTVVSEGVAHEGAKPARAIFLA-SGK- 229 (472)
T ss_pred EEeccCCceeeec-C-CCCeEEEEEeccCCceeeeecccceeEEEcCC----CCcEeeecccccCCCcceeEEec-cCc-
Confidence 9999999998888 3 99999999999999999999999999999543 4566666666654 334455664 666
Q ss_pred EEEeeC----CCcEEEEEcc
Q psy14906 310 ILSAAG----DSTLRIFNTK 325 (583)
Q Consensus 310 l~~~~~----dg~i~iwd~~ 325 (583)
+++.+. +..+-+||..
T Consensus 230 i~tTGfsr~seRq~aLwdp~ 249 (472)
T KOG0303|consen 230 IFTTGFSRMSERQIALWDPN 249 (472)
T ss_pred eeeeccccccccceeccCcc
Confidence 444432 4566666644
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.1e-20 Score=174.06 Aligned_cols=282 Identities=16% Similarity=0.178 Sum_probs=218.0
Q ss_pred eeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe
Q psy14906 104 VGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL 181 (583)
Q Consensus 104 ~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 181 (583)
++.+.+|...|.|. ...|.++++|+.|..++||..+++.++.... +|.+.|+.++.+.+..++|+++
T Consensus 183 ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~r-----------Ghs~ditdlavs~~n~~iaaaS 251 (1113)
T KOG0644|consen 183 IKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCR-----------GHSGDITDLAVSSNNTMIAAAS 251 (1113)
T ss_pred HHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCC-----------CCccccchhccchhhhhhhhcc
Confidence 45677999999996 7889999999999999999999999999998 9999999999999999999999
Q ss_pred cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhh---hhhccccceEEEEEec
Q psy14906 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ---IKKAHRKVVTGAHFLY 258 (583)
Q Consensus 182 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~---~~~~~~~~v~~~~~~~ 258 (583)
.|..|++|.+.++.++..+.+|++.|++++|+|- .+.+.||++++||.+-.-.... .......-+.++.|..
T Consensus 252 ~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~-----~sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~ 326 (1113)
T KOG0644|consen 252 NDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPR-----ASSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFEN 326 (1113)
T ss_pred cCceEEEEecCCCchHHHHhccccceeeeccCcc-----ccCCCCCceEeccccccccccCCCCCCcccccceeeeeccc
Confidence 9999999999999999999999999999999995 3678899999999871111111 1011235667778888
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchh
Q psy14906 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 338 (583)
++.-++|++.|+.-..|.++.. ..+...+..+.++.......+++-.+-.+++|++.++.....+
T Consensus 327 ~~~~f~Tgs~d~ea~n~e~~~l----------~~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l----- 391 (1113)
T KOG0644|consen 327 NGDRFLTGSRDGEARNHEFEQL----------AWRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNL----- 391 (1113)
T ss_pred cccccccccCCcccccchhhHh----------hhhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhh-----
Confidence 8889999999999998854321 1222222223333222345566666778888988887654432
Q ss_pred hhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEE
Q psy14906 339 NRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCV 418 (583)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 418 (583)
..+...+..+
T Consensus 392 ----------------------------------------------------------------------~ghsd~~yvL 401 (1113)
T KOG0644|consen 392 ----------------------------------------------------------------------MGHSDEVYVL 401 (1113)
T ss_pred ----------------------------------------------------------------------cccccceeee
Confidence 1122567778
Q ss_pred EEccCC-cEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 419 YITHCG-NFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 419 ~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
.++|-+ +....++.||...|||+-.|..++.+. .+ .+.+..-+||+||..++....-|.++|......
T Consensus 402 d~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~----~g-h~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs 470 (1113)
T KOG0644|consen 402 DVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYF----IG-HGKLVDGKFSQDGTSIALSDDHGQLYILGTGQS 470 (1113)
T ss_pred eecCCCcHhhhhccCCCceEeeecccCCcceeee----cc-cceeeccccCCCCceEecCCCCCceEEeccCCC
Confidence 888854 556678899999999999998888774 24 456777899999999998888899999876544
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.1e-17 Score=137.81 Aligned_cols=299 Identities=16% Similarity=0.203 Sum_probs=210.0
Q ss_pred CCceeEEEeccCCCeEEEEEe--cCCCCEEEEEcC----CCcEEEEeC--CCCeehhhhhhccccceEEEEEecCCC---
Q psy14906 193 TDESLMEFIQTWGPVTALSFR--TDGPPMMVSGSN----TGHLTVWNL--EDRQVENQIKKAHRKVVTGAHFLYNEP--- 261 (583)
Q Consensus 193 ~~~~~~~~~~~~~~v~~~~~~--~~~~~~l~s~~~----dg~i~vwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~--- 261 (583)
.++.+..+..+ -++.++.|+ |+.+..|+.|+. .+.|.|-.+ ++++.+..-...|.-+++.+.|.|+..
T Consensus 34 r~~eiy~Y~ap-~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~ 112 (364)
T KOG0290|consen 34 RRKEIYTYNAP-WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVY 112 (364)
T ss_pred ccceEEEecCC-CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccC
Confidence 34566677777 788999998 455557888874 455666544 445554443347899999999999863
Q ss_pred --EEEEEeCCCeEEEEEccCCCCCceeeEEe-----ccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeec
Q psy14906 262 --LLVTSSPDNTLKLWIFDKADGNGRLLRIR-----EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLG 334 (583)
Q Consensus 262 --~l~s~~~d~~i~~w~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 334 (583)
+||+.+ -.+|+|.+..++....+...+ ..+.+++++..|+..+.+++.+.+-|-+..+||++++..-. +
T Consensus 113 pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~-v- 188 (364)
T KOG0290|consen 113 PDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGT-V- 188 (364)
T ss_pred cchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccc-e-
Confidence 566654 469999886544333332222 34567899999998788999999999999999998862200 0
Q ss_pred cchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCC
Q psy14906 335 IASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSK 414 (583)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (583)
+...-.|...
T Consensus 189 ----------------------------------------------------------------------kTQLIAHDKE 198 (364)
T KOG0290|consen 189 ----------------------------------------------------------------------KTQLIAHDKE 198 (364)
T ss_pred ----------------------------------------------------------------------eeEEEecCcc
Confidence 0111123367
Q ss_pred ceEEEEccCC-cEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC-cEEEEeecCC-cEEEEEccCC
Q psy14906 415 PTCVYITHCG-NFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN-QIVISGGNDQ-TVKVWHFKQT 491 (583)
Q Consensus 415 i~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg-~i~iwd~~~~ 491 (583)
|..++|..++ +.+++.+.||.+++||++..+....+-.. .....+...++|++.. +++|+-..|. .|.|.|++..
T Consensus 199 V~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~--p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P 276 (364)
T KOG0290|consen 199 VYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYED--PSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVP 276 (364)
T ss_pred eeEEEeccCccceEEEecCCCcEEEEEecccccceEEecC--CCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCC
Confidence 8999999876 57788899999999999876654443221 2235678889998744 6778776554 6999999987
Q ss_pred CCCceEEeeccCCeeeEEeccCC-cEEEEEeCCceEEEEEccccce------EEeecccccceeeEEecC-CCcEEEEEe
Q psy14906 492 GKPPLRSIKLDNGISFFRTHQES-SMLAVCLDDFTVNIIDIDTCTI------IRKLSGHMGQLTDADFSP-DSRWLITAS 563 (583)
Q Consensus 492 ~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~------~~~~~~h~~~v~~l~~s~-d~~~l~s~~ 563 (583)
.....+.-.|.+.|+.++|.|.. ..++++++|..+.+||+++.-. +..+. ..+.|+.+.|++ .+.+++.+.
T Consensus 277 ~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~-a~~EVNqi~Ws~~~~Dwiai~~ 355 (364)
T KOG0290|consen 277 CTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYT-AGGEVNQIQWSSSQPDWIAICF 355 (364)
T ss_pred CcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhh-ccceeeeeeecccCCCEEEEEe
Confidence 53444445667899999999965 4899999999999999975432 22233 457899999996 566777765
Q ss_pred CCCeEEE
Q psy14906 564 MDCTIRV 570 (583)
Q Consensus 564 ~d~~i~v 570 (583)
++++.+
T Consensus 356 -~kklei 361 (364)
T KOG0290|consen 356 -GKKLEI 361 (364)
T ss_pred -cCeeeE
Confidence 444544
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.3e-18 Score=138.83 Aligned_cols=235 Identities=17% Similarity=0.178 Sum_probs=171.4
Q ss_pred eEEEEE----cCCeEEEEecc---ceeeeee-cccCccEEEE--ccCC-----CEEEEEeCCCcEEEEEcCCC--cEEEE
Q psy14906 84 FHIYTS----ANNIIYAWRRG---IDIVGTY-KGHTSPVHLI--LPFG-----PHLISVDEESNVKVWDIKAE--ETYLE 146 (583)
Q Consensus 84 ~~~~~~----~~~~i~vw~~~---~~~~~~~-~~h~~~v~~i--s~~~-----~~l~s~~~dg~i~iwd~~~~--~~~~~ 146 (583)
+++.++ ..+.|.|-.++ ++.+..- -.|..+++.+ .|+. +.||+.+ ..+++|.+... +....
T Consensus 61 rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~ 138 (364)
T KOG0290|consen 61 RLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQ 138 (364)
T ss_pred eEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehh
Confidence 455554 34566666542 2222211 3788899986 5554 4677654 47999999842 22211
Q ss_pred eeccCCceEEecccCCcceEEEeeCC-CCCEEEEEecCCeEEEEEccCCce---eEEEeccCCCeEEEEEecCCCCEEEE
Q psy14906 147 LSFDNDTFKIMGKRWNSCVNVLEPSP-VVDIIGVGLSNKKIILHNILTDES---LMEFIQTWGPVTALSFRTDGPPMMVS 222 (583)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~~l~s 222 (583)
..+..... ..+..++++..|+. |-++|.+.+-|.+..|||++++.. ...+-.|..+|..++|...+..++++
T Consensus 139 ~~L~~~kn----s~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FAS 214 (364)
T KOG0290|consen 139 SVLNNNKN----SEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFAS 214 (364)
T ss_pred hhhccCcc----cccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEE
Confidence 11111111 16678999999987 677889999999999999998733 55677999999999999988889999
Q ss_pred EcCCCcEEEEeCCCCeehhhhhhc--cccceEEEEEecCC-CEEEEEeCC-CeEEEEEccCCCCCceeeEEeccCCCCCe
Q psy14906 223 GSNTGHLTVWNLEDRQVENQIKKA--HRKVVTGAHFLYNE-PLLVTSSPD-NTLKLWIFDKADGNGRLLRIREGHSAPPN 298 (583)
Q Consensus 223 ~~~dg~i~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~-~~l~s~~~d-~~i~~w~~~~~~~~~~~~~~~~~~~~~v~ 298 (583)
.+.||.+|+||++..+.-..+... ...+...++|++.. +++|+-..| ..|.+.|+.. ....+..+++|.+.|+
T Consensus 215 vgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~---P~tpva~L~~H~a~VN 291 (364)
T KOG0290|consen 215 VGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRV---PCTPVARLRNHQASVN 291 (364)
T ss_pred ecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecC---CCcceehhhcCccccc
Confidence 999999999999876544333221 14577889998754 566765544 5688887765 3567888999999999
Q ss_pred eEEEeeCCCCEEEEeeCCCcEEEEEcccc
Q psy14906 299 YIQFYGNSSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 299 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
.++|.|.....|.+++.|....+||+...
T Consensus 292 gIaWaPhS~~hictaGDD~qaliWDl~q~ 320 (364)
T KOG0290|consen 292 GIAWAPHSSSHICTAGDDCQALIWDLQQM 320 (364)
T ss_pred ceEecCCCCceeeecCCcceEEEEecccc
Confidence 99999999999999999999999998753
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=5e-17 Score=130.46 Aligned_cols=261 Identities=13% Similarity=0.132 Sum_probs=183.8
Q ss_pred EEEeCCCceEEEEeeCCeEEEEecCCc----------EEEeecCCCCCCeEEEEeeCeEEEEEcCCeEEEEeccc----e
Q psy14906 37 RFIRRRKETLFVTCVGKAFHVYGCNHF----------KLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGI----D 102 (583)
Q Consensus 37 ~~~p~~~~~~i~~~~~~~i~v~d~~~~----------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~i~vw~~~~----~ 102 (583)
+++|-++ ++++....+.|.+..++.. ..+...++|+++|..++|...++..+.||.|+-|.-.. .
T Consensus 17 a~sp~~~-~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d~~Lls~gdG~V~gw~W~E~~es~ 95 (325)
T KOG0649|consen 17 AISPSKQ-YLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHDDFLLSGGDGLVYGWEWNEEEESL 95 (325)
T ss_pred hhCCcce-EEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeehhheeeccCceEEEeeehhhhhhc
Confidence 4554433 3566668999999987542 22334478999999999977777777779999887321 1
Q ss_pred eeeee-----cccC-----ccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEee
Q psy14906 103 IVGTY-----KGHT-----SPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEP 170 (583)
Q Consensus 103 ~~~~~-----~~h~-----~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 170 (583)
..+.+ .-|. -.|+++ .|..+-++.++.|+.++-||+++|+...+++ +|.+.|.+++-
T Consensus 96 ~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~r-----------GHtDYvH~vv~ 164 (325)
T KOG0649|consen 96 ATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYR-----------GHTDYVHSVVG 164 (325)
T ss_pred cchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEc-----------CCcceeeeeee
Confidence 11111 1122 235665 7778778877789999999999999999998 99999999999
Q ss_pred CCCCCEEEEEecCCeEEEEEccCCceeEEEecc----------CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeeh
Q psy14906 171 SPVVDIIGVGLSNKKIILHNILTDESLMEFIQT----------WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE 240 (583)
Q Consensus 171 s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 240 (583)
-.....+.+|++||++++||.++++.+..+... ...|-+++-+.| +|++|+. ..+.+|++++.++.
T Consensus 165 R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~ed---WlvCGgG-p~lslwhLrsse~t 240 (325)
T KOG0649|consen 165 RNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNED---WLVCGGG-PKLSLWHLRSSEST 240 (325)
T ss_pred cccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCc---eEEecCC-CceeEEeccCCCce
Confidence 666778899999999999999999998877522 234566665544 6777664 57999999999888
Q ss_pred hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEE
Q psy14906 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLR 320 (583)
Q Consensus 241 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 320 (583)
..+ .-..++..+.|.. ..+++++..+.+.-|.+ .+.............++..+...--++|-.++....+.
T Consensus 241 ~vf--pipa~v~~v~F~~--d~vl~~G~g~~v~~~~l-----~Gvl~a~ip~~s~~c~s~s~~~~p~k~~s~ag~s~~~~ 311 (325)
T KOG0649|consen 241 CVF--PIPARVHLVDFVD--DCVLIGGEGNHVQSYTL-----NGVLQANIPVESTACYSASWQTSPIKFISIAGFSNKLH 311 (325)
T ss_pred EEE--ecccceeEeeeec--ceEEEeccccceeeeee-----ccEEEEeccCCccceeeecccCCceEEEEecccceeee
Confidence 877 4567888888854 46788888888999966 34444444444444455555431123444555555665
Q ss_pred EE
Q psy14906 321 IF 322 (583)
Q Consensus 321 iw 322 (583)
++
T Consensus 312 i~ 313 (325)
T KOG0649|consen 312 IL 313 (325)
T ss_pred ee
Confidence 55
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.1e-18 Score=165.61 Aligned_cols=303 Identities=17% Similarity=0.212 Sum_probs=210.1
Q ss_pred EEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe-------ehhhhhhccccceEEEEEecCCC
Q psy14906 189 HNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ-------VENQIKKAHRKVVTGAHFLYNEP 261 (583)
Q Consensus 189 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~ 261 (583)
|+.+ |..+..+..|...+..++.+++...++++|+.||+|++||...-. ...++ ......+.++...+.++
T Consensus 1034 W~p~-G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~lty-s~~~sr~~~vt~~~~~~ 1111 (1431)
T KOG1240|consen 1034 WNPR-GILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTY-SPEGSRVEKVTMCGNGD 1111 (1431)
T ss_pred CCcc-ceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEE-eccCCceEEEEeccCCC
Confidence 7664 888899999999999999988774499999999999999986421 12222 22456888999999999
Q ss_pred EEEEEeCCCeEEEEEccCCCCCc---eeeEEeccCC-CC-CeeEEEeeCCCC-EEEEeeCCCcEEEEEccccccceeecc
Q psy14906 262 LLVTSSPDNTLKLWIFDKADGNG---RLLRIREGHS-AP-PNYIQFYGNSSD-NILSAAGDSTLRIFNTKSETSNKNLGI 335 (583)
Q Consensus 262 ~l~s~~~d~~i~~w~~~~~~~~~---~~~~~~~~~~-~~-v~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~ 335 (583)
.+|.++.||.|++.+++...... ...+....+. +. |..-+|...+.. .++.+...+.|..||++.......+..
T Consensus 1112 ~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~ 1191 (1431)
T KOG1240|consen 1112 QFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKN 1191 (1431)
T ss_pred eEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhc
Confidence 99999999999999887632111 1111111121 22 223334333344 677778888899999876543222210
Q ss_pred chhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCc
Q psy14906 336 ASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKP 415 (583)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i 415 (583)
. ...+.+
T Consensus 1192 ~-------------------------------------------------------------------------~~hG~v 1198 (1431)
T KOG1240|consen 1192 Q-------------------------------------------------------------------------LRHGLV 1198 (1431)
T ss_pred C-------------------------------------------------------------------------ccccce
Confidence 0 001679
Q ss_pred eEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC---cEEEEee--cCCcEEEEEccC
Q psy14906 416 TCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN---QIVISGG--NDQTVKVWHFKQ 490 (583)
Q Consensus 416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~---~~l~s~~--~dg~i~iwd~~~ 490 (583)
++++.+|.+.++++|+..|.+.+||++-+.++..+. .++..+|+.+..+|-. ...++++ ..+.|.+|++.+
T Consensus 1199 TSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~----~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~~ 1274 (1431)
T KOG1240|consen 1199 TSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWE----HPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNMET 1274 (1431)
T ss_pred eEEEecCCceEEEEecCCceEEEEEeecCceeeccc----CcccCCcceEEeeccCCCCceEEEecccCCCceeeeeccc
Confidence 999999999999999999999999999998888876 3456888888877643 3444444 577899999998
Q ss_pred CCCCceEEeeccC--------------------CeeeEEeccCCcEEEEEeCCceEEEEEccccceE-------------
Q psy14906 491 TGKPPLRSIKLDN--------------------GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTII------------- 537 (583)
Q Consensus 491 ~~~~~~~~~~~~~--------------------~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~------------- 537 (583)
+ .+...+-... ......+...+.++.+|+.|..|+.||....+..
T Consensus 1275 g--~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~ 1352 (1431)
T KOG1240|consen 1275 G--LRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYST 1352 (1431)
T ss_pred C--cceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccc
Confidence 8 4444432221 1112233334568899999999999997432110
Q ss_pred -----------------------------------Eee--------cccccceeeEEecCC-CcEEEEEeCCCeEEEEe
Q psy14906 538 -----------------------------------RKL--------SGHMGQLTDADFSPD-SRWLITASMDCTIRVWD 572 (583)
Q Consensus 538 -----------------------------------~~~--------~~h~~~v~~l~~s~d-~~~l~s~~~d~~i~vw~ 572 (583)
..+ ..|..+|+++++... ..+|++++.||.|+||.
T Consensus 1353 ~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1353 NSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred cchhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence 000 147788999988664 45789999999999994
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-17 Score=137.63 Aligned_cols=234 Identities=15% Similarity=0.184 Sum_probs=176.3
Q ss_pred EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe---ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEE
Q psy14906 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ---VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWI 276 (583)
Q Consensus 200 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~ 276 (583)
+..-..+|+|.+|++|+. .++.+..+..|.||.....+ ...++ ..|...|+.++|+|..+.|++++.|..-.+|.
T Consensus 6 ~~~~~~pitchAwn~drt-~iAv~~~~~evhiy~~~~~~~w~~~htl-s~Hd~~vtgvdWap~snrIvtcs~drnayVw~ 83 (361)
T KOG1523|consen 6 FHRLLEPITCHAWNSDRT-QIAVSPNNHEVHIYSMLGADLWEPAHTL-SEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWT 83 (361)
T ss_pred eeeccCceeeeeecCCCc-eEEeccCCceEEEEEecCCCCceeceeh-hhhCcceeEEeecCCCCceeEccCCCCccccc
Confidence 333347999999999999 89999989999999987654 56777 78999999999999999999999999999995
Q ss_pred ccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcccccc
Q psy14906 277 FDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKF 356 (583)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (583)
.. ..+..+....+..+....+++.|+| .++.+++|+....|.+|-++....-
T Consensus 84 ~~-~~~~WkptlvLlRiNrAAt~V~WsP-~enkFAVgSgar~isVcy~E~ENdW-------------------------- 135 (361)
T KOG1523|consen 84 QP-SGGTWKPTLVLLRINRAATCVKWSP-KENKFAVGSGARLISVCYYEQENDW-------------------------- 135 (361)
T ss_pred cC-CCCeeccceeEEEeccceeeEeecC-cCceEEeccCccEEEEEEEecccce--------------------------
Confidence 42 4456666677777889999999998 7899999999999999987653210
Q ss_pred CCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceE
Q psy14906 357 ILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHV 436 (583)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 436 (583)
...........+.|+++.|+|++-++++|+.|+..
T Consensus 136 ---------------------------------------------WVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~ 170 (361)
T KOG1523|consen 136 ---------------------------------------------WVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKC 170 (361)
T ss_pred ---------------------------------------------ehhhhhCCccccceeeeeccCCcceecccccCcce
Confidence 00001111122679999999999999999999999
Q ss_pred EEEEccc------------------CccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEE
Q psy14906 437 DRFNIQS------------------GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS 498 (583)
Q Consensus 437 ~i~d~~~------------------~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 498 (583)
++|..-- |+++.++ ....+.+..+.|+|+|..|+-.+.|..+.+=|...........
T Consensus 171 rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~-----~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~ 245 (361)
T KOG1523|consen 171 RVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEA-----SSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSV 245 (361)
T ss_pred eEEEEeeeccccCCCCCCCccCCcHHHHHHhh-----ccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccch
Confidence 9997531 1122222 3556889999999999999999999999999987763112222
Q ss_pred eeccCCeeeEEeccC
Q psy14906 499 IKLDNGISFFRTHQE 513 (583)
Q Consensus 499 ~~~~~~v~~~~~s~~ 513 (583)
....-+..++.|-.+
T Consensus 246 ~~~~lP~ls~~~ise 260 (361)
T KOG1523|consen 246 ATAQLPLLSVSWISE 260 (361)
T ss_pred hhccCCceeeEeecC
Confidence 122245555555443
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=8e-17 Score=155.68 Aligned_cols=268 Identities=16% Similarity=0.165 Sum_probs=197.5
Q ss_pred eEEEEeeCCeEEEEecCCcEEEeec------CCCCCCeEEEEeeCeEEEEEcCCeEEEEeccceeeeeecccCccEEEEc
Q psy14906 45 TLFVTCVGKAFHVYGCNHFKLLSVS------PQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLIL 118 (583)
Q Consensus 45 ~~i~~~~~~~i~v~d~~~~~~~~~~------~~h~~~v~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~is 118 (583)
.++.++.+-.|.+||+..+.++..+ +.|...-.-..+.+.+++++.-+.+..=+...+....+..+-.. ..+.
T Consensus 18 ~~llag~gp~i~~yd~~s~~li~~~~~~~~~~~H~~e~~~~l~~~~~v~~~~~~~v~~~~~~~~~~~~~s~wi~g-~~l~ 96 (967)
T KOG0974|consen 18 DYLLAGSGPEILVYDLSSGCLIRHLIQSKILEVHRGEGKVKLLSGKIVTCAKSDEVYVKEASNQIIERFSDWIFG-AKLF 96 (967)
T ss_pred ceeeecCCCceEEeeCCchhHhhhhhhhcccccccccccceeccceEEEEEeecceeecchhhhhhhhccccccc-cchh
Confidence 3577778999999999988766433 34522111222345677776666555555444444444433322 3356
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeE
Q psy14906 119 PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLM 198 (583)
Q Consensus 119 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~ 198 (583)
.+.+.++.+..++.+.+||...+.....+.-... ..-....-+.++++.-++++|+.-+.|.+|+....+.-.
T Consensus 97 ~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er-------~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~ 169 (967)
T KOG0974|consen 97 EENKKIALVTSRNSLLIRDSKNSSVLSKIQSDER-------CTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPI 169 (967)
T ss_pred hhcceEEEEEcCceEEEEecccCceehhcCCCce-------EEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcc
Confidence 7788899999999999999998877766641100 001223334567777899999999999999998554445
Q ss_pred EEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEcc
Q psy14906 199 EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 199 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 278 (583)
.+.+|.+.+..+.|+.||+ ++++.+.|.++++|++++.+.....--+|+..|..+.|.|+ .+++++.|.+.++|+.+
T Consensus 170 ~l~GHeG~iF~i~~s~dg~-~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~ 246 (967)
T KOG0974|consen 170 RLKGHEGSIFSIVTSLDGR-YIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVN 246 (967)
T ss_pred eecccCCceEEEEEccCCc-EEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEecc
Confidence 6889999999999999999 99999999999999999988776333699999999999998 89999999999999653
Q ss_pred CCCCCceeeEEeccCCC-CCeeEEEeeCCCCEEEEeeCCCcEEEEEcccccc
Q psy14906 279 KADGNGRLLRIREGHSA-PPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETS 329 (583)
Q Consensus 279 ~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 329 (583)
...+..+.+|.. .+..++..+ +...+++++.|+.+++|++.....
T Consensus 247 -----~~~l~~y~~h~g~~iw~~~~~~-~~~~~vT~g~Ds~lk~~~l~~r~~ 292 (967)
T KOG0974|consen 247 -----GTQLEVYDEHSGKGIWKIAVPI-GVIIKVTGGNDSTLKLWDLNGRGL 292 (967)
T ss_pred -----cceehhhhhhhhcceeEEEEcC-CceEEEeeccCcchhhhhhhcccc
Confidence 444556666654 578888875 678899999999999999876543
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-16 Score=146.05 Aligned_cols=322 Identities=13% Similarity=0.117 Sum_probs=197.3
Q ss_pred EEEcCCeEEEEecc-ceeeeeecccCcc-E-EEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCc
Q psy14906 87 YTSANNIIYAWRRG-IDIVGTYKGHTSP-V-HLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS 163 (583)
Q Consensus 87 ~~~~~~~i~vw~~~-~~~~~~~~~h~~~-v-~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (583)
+-..++.|.+.|.. .+.+..+...... . ..++|||+++++++.||.|.++|+.+++.+.+++. ..
T Consensus 11 ~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~------------G~ 78 (369)
T PF02239_consen 11 VERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKV------------GG 78 (369)
T ss_dssp EEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-------------SS
T ss_pred EecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEec------------CC
Confidence 33467889999864 4667777654433 2 23499999999999999999999999999999962 44
Q ss_pred ceEEEeeCCCCCEEEEEe-cCCeEEEEEccCCceeEEEecc-------CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q psy14906 164 CVNVLEPSPVVDIIGVGL-SNKKIILHNILTDESLMEFIQT-------WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 164 ~i~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 235 (583)
....+++|+||++++++. ..+.+.++|.++.+.++.+... ...+.++..+|..+.++++--..+.|.+-|..
T Consensus 79 ~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~ 158 (369)
T PF02239_consen 79 NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYS 158 (369)
T ss_dssp EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETT
T ss_pred CcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEec
Confidence 568899999999998775 5789999999999999887632 34678888888888455555666888888987
Q ss_pred CCeehhhhhhccccceEEEEEecCCCEEEEE-eCCCeEEEEEccCCCCCceeeEEec----cCCCCCeeEEEeeCCCCEE
Q psy14906 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTS-SPDNTLKLWIFDKADGNGRLLRIRE----GHSAPPNYIQFYGNSSDNI 310 (583)
Q Consensus 236 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~i~~w~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l 310 (583)
..+.+..-............|+|++++++.+ ..+..+-++|.. +.+....+. .|..+...+ .+| ...
T Consensus 159 d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~----~~k~v~~i~~g~~p~~~~~~~~-php-~~g-- 230 (369)
T PF02239_consen 159 DPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTK----TGKLVALIDTGKKPHPGPGANF-PHP-GFG-- 230 (369)
T ss_dssp TSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETT----TTEEEEEEE-SSSBEETTEEEE-EET-TTE--
T ss_pred cccccceeeecccccccccccCcccceeeecccccceeEEEeec----cceEEEEeeccccccccccccc-cCC-Ccc--
Confidence 6543321112334567789999999987664 456788888643 233333221 122222221 122 110
Q ss_pred EEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEe
Q psy14906 311 LSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLW 390 (583)
Q Consensus 311 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 390 (583)
.+|....
T Consensus 231 ---------~vw~~~~---------------------------------------------------------------- 237 (369)
T PF02239_consen 231 ---------PVWATSG---------------------------------------------------------------- 237 (369)
T ss_dssp ---------EEEEEEB----------------------------------------------------------------
T ss_pred ---------eEEeecc----------------------------------------------------------------
Confidence 1122110
Q ss_pred ecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCC
Q psy14906 391 SFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNL 470 (583)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 470 (583)
.+...+..-....+.+||..+.+.+..+ ...... .-+..+|+
T Consensus 238 --------------------------------~~~~~~~~ig~~~v~v~d~~~wkvv~~I-----~~~G~g-lFi~thP~ 279 (369)
T PF02239_consen 238 --------------------------------LGYFAIPLIGTDPVSVHDDYAWKVVKTI-----PTQGGG-LFIKTHPD 279 (369)
T ss_dssp --------------------------------SSSSEEEEEE--TTT-STTTBTSEEEEE-----E-SSSS---EE--TT
T ss_pred --------------------------------ccceecccccCCccccchhhcCeEEEEE-----ECCCCc-ceeecCCC
Confidence 0011111111122445666666666666 333344 67788999
Q ss_pred CcEEEEe----ecCCcEEEEEccCCCCCceEEeeccC--CeeeEEeccCCcEEEEEeC--CceEEEEEccccceEEeec
Q psy14906 471 NQIVISG----GNDQTVKVWHFKQTGKPPLRSIKLDN--GISFFRTHQESSMLAVCLD--DFTVNIIDIDTCTIIRKLS 541 (583)
Q Consensus 471 ~~~l~s~----~~dg~i~iwd~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~ 541 (583)
++++... ...++|.++|.++. +....+.... .+..+.|++||+++.++.. ++.|.+||..+.+++.++.
T Consensus 280 s~~vwvd~~~~~~~~~v~viD~~tl--~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 280 SRYVWVDTFLNPDADTVQVIDKKTL--KVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp -SEEEEE-TT-SSHT-EEEEECCGT--EEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred CccEEeeccCCCCCceEEEEECcCc--ceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEEEEE
Confidence 9998877 45578999999987 6666665444 4999999999997666544 3479999999999988876
|
... |
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5e-18 Score=162.95 Aligned_cols=236 Identities=14% Similarity=0.164 Sum_probs=163.7
Q ss_pred CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC---CeEEEEEccCCceeEEEeccCCC
Q psy14906 130 ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN---KKIILHNILTDESLMEFIQTWGP 206 (583)
Q Consensus 130 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~ 206 (583)
+..|.+||.+... ...+. .+...+...+|||||+.|+..+.+ ..|++||+.+++.... ....+.
T Consensus 183 ~~~i~i~d~dg~~-~~~lt-----------~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l-~~~~g~ 249 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVN-----------RSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVV-ASFRGH 249 (429)
T ss_pred eEEEEEECCCCCC-ceEec-----------cCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEE-ecCCCc
Confidence 3689999987654 44454 667789999999999999987654 3699999988754322 212233
Q ss_pred eEEEEEecCCCCEEEEEcCCCcEEEE--eCCCCeehhhhhhccccceEEEEEecCCCEEEEEe-CCCeEEEEEccCCCCC
Q psy14906 207 VTALSFRTDGPPMMVSGSNTGHLTVW--NLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS-PDNTLKLWIFDKADGN 283 (583)
Q Consensus 207 v~~~~~~~~~~~~l~s~~~dg~i~vw--d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~~ 283 (583)
...++|+|||+.++++.+.+|.+.|| |+.+++. ..+ ..+...+....|+|||+.|+..+ .++...+|+++.....
T Consensus 250 ~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~l-t~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~ 327 (429)
T PRK01742 250 NGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP-SQL-TSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGG 327 (429)
T ss_pred cCceeECCCCCEEEEEEecCCcEEEEEEECCCCCe-Eee-ccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 45789999999444445567876555 6665554 334 35666788899999999777554 5788999988764332
Q ss_pred ceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccce
Q psy14906 284 GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQ 363 (583)
Q Consensus 284 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (583)
... + .+.. ....|+| |++.|+..+.++ +.+||+.++.......
T Consensus 328 ~~~---l-~~~~--~~~~~Sp-DG~~ia~~~~~~-i~~~Dl~~g~~~~lt~----------------------------- 370 (429)
T PRK01742 328 ASL---V-GGRG--YSAQISA-DGKTLVMINGDN-VVKQDLTSGSTEVLSS----------------------------- 370 (429)
T ss_pred eEE---e-cCCC--CCccCCC-CCCEEEEEcCCC-EEEEECCCCCeEEecC-----------------------------
Confidence 222 2 2332 4577887 888988887754 5568887664321100
Q ss_pred eeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcc-
Q psy14906 364 FSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQ- 442 (583)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~- 442 (583)
. .....+.|+|||+.++.++.+|...+|.+.
T Consensus 371 ------------------------------------------~------~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~ 402 (429)
T PRK01742 371 ------------------------------------------T------FLDESPSISPNGIMIIYSSTQGLGKVLQLVS 402 (429)
T ss_pred ------------------------------------------C------CCCCCceECCCCCEEEEEEcCCCceEEEEEE
Confidence 0 012346799999999999999988888764
Q ss_pred -cCccccccCCCCCCCcccCeeEEEEeCC
Q psy14906 443 -SGAHRGSYGHDNQPGHVGGVRGVVSDNL 470 (583)
Q Consensus 443 -~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 470 (583)
++.....+ ..|.+.+..++|+|-
T Consensus 403 ~~G~~~~~l-----~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 403 ADGRFKARL-----PGSDGQVKFPAWSPY 426 (429)
T ss_pred CCCCceEEc-----cCCCCCCCCcccCCC
Confidence 56777777 678888999999984
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.1e-17 Score=143.67 Aligned_cols=198 Identities=19% Similarity=0.198 Sum_probs=153.1
Q ss_pred eeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccE
Q psy14906 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNI 377 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (583)
..++|++ ++..+++++.||++|+|+.........
T Consensus 148 k~vaf~~-~gs~latgg~dg~lRv~~~Ps~~t~l~--------------------------------------------- 181 (398)
T KOG0771|consen 148 KVVAFNG-DGSKLATGGTDGTLRVWEWPSMLTILE--------------------------------------------- 181 (398)
T ss_pred eEEEEcC-CCCEeeeccccceEEEEecCcchhhhh---------------------------------------------
Confidence 6789986 889999999999999999655432211
Q ss_pred EEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCC
Q psy14906 378 AAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPG 457 (583)
Q Consensus 378 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 457 (583)
...+...|.++.|+|||++|++-+.| ..+||+..++..+..... ..
T Consensus 182 ------------------------------e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~---~~ 227 (398)
T KOG0771|consen 182 ------------------------------EIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTP---FS 227 (398)
T ss_pred ------------------------------hHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCC---cc
Confidence 11222679999999999999999999 899999999977766532 23
Q ss_pred cccCeeEEEEeCCC-----cEEEEeecCCcEEEEEccCCCC----CceEEeeccCCeeeEEeccCCcEEEEEeCCceEEE
Q psy14906 458 HVGGVRGVVSDNLN-----QIVISGGNDQTVKVWHFKQTGK----PPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNI 528 (583)
Q Consensus 458 h~~~v~~~~~s~~~-----~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 528 (583)
.......+.|+.|+ ..++....-+.|+.|++..... +..+.+...+.|++++.++||+++|.|+.||.|.|
T Consensus 228 k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai 307 (398)
T KOG0771|consen 228 KDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAI 307 (398)
T ss_pred cchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEE
Confidence 44556677788776 3333444556677777654422 23334445668999999999999999999999999
Q ss_pred EEccccceEEee-cccccceeeEEecCCCcEEEEEeCCCeEEEEeCCC
Q psy14906 529 IDIDTCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575 (583)
Q Consensus 529 ~d~~~~~~~~~~-~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~ 575 (583)
++..+.+.+... +.|...|+.+.|+||.+++++.+.|....|..+.-
T Consensus 308 ~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 308 YDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred EEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 999998887654 46999999999999999999999999888877653
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-17 Score=149.25 Aligned_cols=220 Identities=18% Similarity=0.245 Sum_probs=162.7
Q ss_pred eeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCC--CCCEE
Q psy14906 102 DIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSP--VVDII 177 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l 177 (583)
.+.+.|+||++.|+++ +.+|.+|++|++|-.+.|||.-..+.+..+. .+|...|.++.|-| +.+++
T Consensus 41 ~lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~----------TgHtaNIFsvKFvP~tnnriv 110 (758)
T KOG1310|consen 41 DLEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSIS----------TGHTANIFSVKFVPYTNNRIV 110 (758)
T ss_pred chhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeee----------cccccceeEEeeeccCCCeEE
Confidence 3456789999999999 8899999999999999999999888888887 39999999999998 45688
Q ss_pred EEEecCCeEEEEEccC----------CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe-------eh
Q psy14906 178 GVGLSNKKIILHNILT----------DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ-------VE 240 (583)
Q Consensus 178 ~~~~~d~~i~iw~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-------~~ 240 (583)
++|..|..|+++|+.. .+....+..|...|..++-.|+++..+.++++||+++-+|++... +.
T Consensus 111 ~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~ 190 (758)
T KOG1310|consen 111 LSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCP 190 (758)
T ss_pred EeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCcccccc
Confidence 9999999999999974 234455678889999999999998799999999999999998531 11
Q ss_pred hhhhhcc--ccceEEEEEecCC-CEEEEEeCCCeEEEEEccCCC----CCc----------eeeEEe-ccCC--------
Q psy14906 241 NQIKKAH--RKVVTGAHFLYNE-PLLVTSSPDNTLKLWIFDKAD----GNG----------RLLRIR-EGHS-------- 294 (583)
Q Consensus 241 ~~~~~~~--~~~v~~~~~~~~~-~~l~s~~~d~~i~~w~~~~~~----~~~----------~~~~~~-~~~~-------- 294 (583)
..+..-+ --...++..+|.. .+|+.|+.|-..++||..... ..+ +++..+ .+|.
T Consensus 191 ~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~ 270 (758)
T KOG1310|consen 191 SILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLD 270 (758)
T ss_pred HHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccc
Confidence 1121112 2356788899875 478999999999999732110 000 111111 1221
Q ss_pred C---CCeeEEEeeCCCCEEEEeeCCCcEEEEEcccccccee
Q psy14906 295 A---PPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKN 332 (583)
Q Consensus 295 ~---~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 332 (583)
. -.+.+.|+| +|.-|+..-....|+++|+..++....
T Consensus 271 ~~~~~~t~vtfnp-NGtElLvs~~gEhVYlfdvn~~~~~~~ 310 (758)
T KOG1310|consen 271 RYITCCTYVTFNP-NGTELLVSWGGEHVYLFDVNEDKSPTP 310 (758)
T ss_pred cceeeeEEEEECC-CCcEEEEeeCCeEEEEEeecCCCCcee
Confidence 1 145678888 565555544445899999987765443
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=8e-17 Score=134.74 Aligned_cols=247 Identities=12% Similarity=0.080 Sum_probs=177.5
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCC---ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC-C
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD---ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL-E 235 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~-~ 235 (583)
....+|+|.+|++|+..+|++..+..|.||..... +...++..|...|+.++|+|..+ .+++++.|..-++|.. .
T Consensus 8 ~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~sn-rIvtcs~drnayVw~~~~ 86 (361)
T KOG1523|consen 8 RLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSN-RIVTCSHDRNAYVWTQPS 86 (361)
T ss_pred eccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCC-ceeEccCCCCccccccCC
Confidence 34689999999999999999999999999998654 56788899999999999999998 7999999999999998 4
Q ss_pred CCe--ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEe
Q psy14906 236 DRQ--VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSA 313 (583)
Q Consensus 236 ~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 313 (583)
.++ +...+ ..+....+++.|+|.++.|++|+..+.|.+|-++.++.=.-....-+.+...|.++.|+| ++-+|++|
T Consensus 87 ~~~WkptlvL-lRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhp-nnVLlaaG 164 (361)
T KOG1523|consen 87 GGTWKPTLVL-LRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHP-NNVLLAAG 164 (361)
T ss_pred CCeeccceeE-EEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccC-Ccceeccc
Confidence 443 33334 468889999999999999999999999999977654322222223345677899999998 78899999
Q ss_pred eCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecC
Q psy14906 314 AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFY 393 (583)
Q Consensus 314 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 393 (583)
+.|+..++|..--......- ...|=...+.+..
T Consensus 165 s~D~k~rVfSayIK~Vdekp----------------------ap~pWgsk~PFG~------------------------- 197 (361)
T KOG1523|consen 165 STDGKCRVFSAYIKGVDEKP----------------------APTPWGSKMPFGQ------------------------- 197 (361)
T ss_pred ccCcceeEEEEeeeccccCC----------------------CCCCCccCCcHHH-------------------------
Confidence 99999999975322110000 0000000000000
Q ss_pred cccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcc-ccccCCCCCCCcccCeeEEEEeCCC
Q psy14906 394 KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH-RGSYGHDNQPGHVGGVRGVVSDNLN 471 (583)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~h~~~v~~~~~s~~~ 471 (583)
.. .+. ....+.+..+.|+|+|..|+-.+.|+.+.+-|...... .... ....-+..++.|-.+.
T Consensus 198 ------lm---~E~-~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~-----~~~~lP~ls~~~ise~ 261 (361)
T KOG1523|consen 198 ------LM---SEA-SSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSV-----ATAQLPLLSVSWISEN 261 (361)
T ss_pred ------HH---Hhh-ccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccch-----hhccCCceeeEeecCC
Confidence 00 000 01126799999999999999999999999999876652 2222 1222566666665443
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-18 Score=153.02 Aligned_cols=309 Identities=18% Similarity=0.253 Sum_probs=226.8
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEe-ccCCCeEEEEEecC-CCCEEEEEcCCCcEEEEeCCCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI-QTWGPVTALSFRTD-GPPMMVSGSNTGHLTVWNLEDR 237 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~ 237 (583)
.|.+.|..+.|+..|..|++|+.|..|.+||+..+.....+. +|...|....|-|. +..-+++++.||.+++=.+...
T Consensus 140 ~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~~t 219 (559)
T KOG1334|consen 140 KHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEILET 219 (559)
T ss_pred CCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeeccc
Confidence 899999999999999999999999999999999998887776 88888999899885 2336899999999998776533
Q ss_pred -ee--hhhhhhccccceEEEEEecCCC-EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCC---CCeeEEEeeCCCCEE
Q psy14906 238 -QV--ENQIKKAHRKVVTGAHFLYNEP-LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA---PPNYIQFYGNSSDNI 310 (583)
Q Consensus 238 -~~--~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l 310 (583)
.+ ...+ ..|.++|.-++.-|+.. .|.+++.|+.+.-+|+.......... ....+.. ....++..|.+...+
T Consensus 220 ~~~e~t~rl-~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~-cr~~~~~~~v~L~~Ia~~P~nt~~f 297 (559)
T KOG1334|consen 220 GYVENTKRL-APHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFV-CREADEKERVGLYTIAVDPRNTNEF 297 (559)
T ss_pred cceecceec-ccccCccceeeecCCCCCcccccccccceeeeeeccCCccceee-eeccCCccceeeeeEecCCCCcccc
Confidence 22 2233 57999999999998764 58899999998888765443222222 2233333 467888888777899
Q ss_pred EEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEe
Q psy14906 311 LSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLW 390 (583)
Q Consensus 311 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 390 (583)
++++.|..+++||.+.-.....-+ .+.
T Consensus 298 aVgG~dqf~RvYD~R~~~~e~~n~-------------------------~~~---------------------------- 324 (559)
T KOG1334|consen 298 AVGGSDQFARVYDQRRIDKEENNG-------------------------VLD---------------------------- 324 (559)
T ss_pred ccCChhhhhhhhcccchhhccccc-------------------------hhh----------------------------
Confidence 999999999999976533211000 000
Q ss_pred ecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcc--------ccccCCCCCCCccc--
Q psy14906 391 SFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH--------RGSYGHDNQPGHVG-- 460 (583)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--------~~~~~~~~~~~h~~-- 460 (583)
.+.+..........|++++|+.++.-+.+...|-.|++|.-.-+.- ...+.....++|..
T Consensus 325 ----------~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~ 394 (559)
T KOG1334|consen 325 ----------KFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSR 394 (559)
T ss_pred ----------hcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccCCCCCCCcchhhccchhhccccccc
Confidence 0111111112225799999999998888889999999995432211 00111111267754
Q ss_pred CeeEEEE-eCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc-CCeeeEEeccCCcEEEEEeCCceEEEEEccccc
Q psy14906 461 GVRGVVS-DNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT 535 (583)
Q Consensus 461 ~v~~~~~-s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 535 (583)
.|.++-| -|...++++|+.-|.|.||+-.++ +.++.++.. .-|+|+.-+|--..||+.+-|..|+||-..+.+
T Consensus 395 TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~--eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~e 469 (559)
T KOG1334|consen 395 TVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTG--EIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLTAE 469 (559)
T ss_pred ccceeeeccCccceEEecCccceEEEEecchh--HHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCccc
Confidence 4666654 688899999999999999999988 787777654 378999999999999999999999999874443
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.4e-18 Score=146.46 Aligned_cols=202 Identities=18% Similarity=0.265 Sum_probs=150.1
Q ss_pred EEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceee
Q psy14906 208 TALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLL 287 (583)
Q Consensus 208 ~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~ 287 (583)
.+++|+.+|. .+++++.||++|+|+..+...+... ..|...|.++.|+|||++|++.+.| ..+||+.+. +..+
T Consensus 148 k~vaf~~~gs-~latgg~dg~lRv~~~Ps~~t~l~e-~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~----g~~~ 220 (398)
T KOG0771|consen 148 KVVAFNGDGS-KLATGGTDGTLRVWEWPSMLTILEE-IAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNT----GAAL 220 (398)
T ss_pred eEEEEcCCCC-EeeeccccceEEEEecCcchhhhhh-HhhcCccccceeCCCCcEEEEecCC-ceEEEEecc----Cchh
Confidence 7899999998 9999999999999998888777777 6899999999999999999999999 899997653 2222
Q ss_pred EEe--ccCCCCCeeEEEeeCCC---C-EEE-EeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCc
Q psy14906 288 RIR--EGHSAPPNYIQFYGNSS---D-NIL-SAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPP 360 (583)
Q Consensus 288 ~~~--~~~~~~v~~~~~~~~~~---~-~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (583)
... .........+.|+. ++ . +++ ....-+.|+.||+..
T Consensus 221 a~~t~~~k~~~~~~cRF~~-d~~~~~l~laa~~~~~~~v~~~~~~~---------------------------------- 265 (398)
T KOG0771|consen 221 ARKTPFSKDEMFSSCRFSV-DNAQETLRLAASQFPGGGVRLCDISL---------------------------------- 265 (398)
T ss_pred hhcCCcccchhhhhceecc-cCCCceEEEEEecCCCCceeEEEeee----------------------------------
Confidence 222 22333455666764 33 1 222 222344555555432
Q ss_pred cceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEE
Q psy14906 361 VSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFN 440 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d 440 (583)
|+-... . ...........|++++.++||++++.|+.+|.|.+++
T Consensus 266 -----------------------------w~~~~~-l------~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~ 309 (398)
T KOG0771|consen 266 -----------------------------WSGSNF-L------RLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYD 309 (398)
T ss_pred -----------------------------eccccc-c------chhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEE
Confidence 221100 0 0000001115799999999999999999999999999
Q ss_pred cccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 441 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
..+-+..+..+ +.|...|+.+.|+||.+++++.+.|.+..+..+.-.
T Consensus 310 ~~~lq~~~~vk----~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~vd 356 (398)
T KOG0771|consen 310 AKSLQRLQYVK----EAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAVD 356 (398)
T ss_pred eceeeeeEeeh----hhheeeeeeEEEcCCcCcccccccCCceeEEEEeec
Confidence 99888887775 689999999999999999999999999988877653
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.6e-18 Score=151.88 Aligned_cols=268 Identities=17% Similarity=0.214 Sum_probs=210.5
Q ss_pred CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q psy14906 204 WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN 283 (583)
Q Consensus 204 ~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~ 283 (583)
....+.+.++.+|+ .|+.|+..|.|..+|..++++...+ .-...|.++.|..+.+++|++ ....+.+|| . .
T Consensus 129 eFGPY~~~ytrnGr-hlllgGrKGHlAa~Dw~t~~L~~Ei--~v~Etv~Dv~~LHneq~~AVA-QK~y~yvYD--~---~ 199 (545)
T KOG1272|consen 129 EFGPYHLDYTRNGR-HLLLGGRKGHLAAFDWVTKKLHFEI--NVMETVRDVTFLHNEQFFAVA-QKKYVYVYD--N---N 199 (545)
T ss_pred ccCCeeeeecCCcc-EEEecCCccceeeeecccceeeeee--ehhhhhhhhhhhcchHHHHhh-hhceEEEec--C---C
Confidence 34567889999999 8888999999999999999998887 346688999999999888877 567789994 3 5
Q ss_pred ceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccce
Q psy14906 284 GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQ 363 (583)
Q Consensus 284 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (583)
+..+..++.| ..|..+.|.| -.-+|++++..|.++.-|+.+|+.+..+....
T Consensus 200 GtElHClk~~-~~v~rLeFLP-yHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~-------------------------- 251 (545)
T KOG1272|consen 200 GTELHCLKRH-IRVARLEFLP-YHFLLVAASEAGFLKYQDVSTGKLVASIRTGA-------------------------- 251 (545)
T ss_pred CcEEeehhhc-Cchhhhcccc-hhheeeecccCCceEEEeechhhhhHHHHccC--------------------------
Confidence 6677777765 4689999998 57788888999999999999998766542211
Q ss_pred eeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEccc
Q psy14906 364 FSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQS 443 (583)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 443 (583)
+.+..++-+|-+..+-+|..+|+|.+|...+
T Consensus 252 -------------------------------------------------G~~~vm~qNP~NaVih~GhsnGtVSlWSP~s 282 (545)
T KOG1272|consen 252 -------------------------------------------------GRTDVMKQNPYNAVIHLGHSNGTVSLWSPNS 282 (545)
T ss_pred -------------------------------------------------CccchhhcCCccceEEEcCCCceEEecCCCC
Confidence 5677788888889999999999999999999
Q ss_pred CccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCC
Q psy14906 444 GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDD 523 (583)
Q Consensus 444 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 523 (583)
.+++..+ ..|.++|.++++.++|++++|.+.|..++|||++.. ..+.++..+.+...+++|..| +||.+- .
T Consensus 283 kePLvKi-----LcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~--~ql~t~~tp~~a~~ls~Sqkg-lLA~~~-G 353 (545)
T KOG1272|consen 283 KEPLVKI-----LCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNF--YQLHTYRTPHPASNLSLSQKG-LLALSY-G 353 (545)
T ss_pred cchHHHH-----HhcCCCcceEEECCCCcEEeecccccceeEeeeccc--cccceeecCCCcccccccccc-ceeeec-C
Confidence 9998888 799999999999999999999999999999999988 666666667788889998655 444443 4
Q ss_pred ceEEEEEc-ccc--ceEEeeccc--ccceeeEEecCCCcEEEEEeCCC
Q psy14906 524 FTVNIIDI-DTC--TIIRKLSGH--MGQLTDADFSPDSRWLITASMDC 566 (583)
Q Consensus 524 g~i~i~d~-~~~--~~~~~~~~h--~~~v~~l~~s~d~~~l~s~~~d~ 566 (583)
..|.||.= -.+ ..-..+-.| .++|..+.|.|-...|-.|-.-|
T Consensus 354 ~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G 401 (545)
T KOG1272|consen 354 DHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGG 401 (545)
T ss_pred CeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeeccccCC
Confidence 47899942 221 111112223 25799999999666665554443
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.5e-17 Score=145.63 Aligned_cols=272 Identities=13% Similarity=0.129 Sum_probs=178.7
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee----hhhhhhccccceEEEEE-----ecCCCEEEEEeCCCeEEEEE
Q psy14906 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV----ENQIKKAHRKVVTGAHF-----LYNEPLLVTSSPDNTLKLWI 276 (583)
Q Consensus 206 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~----~~~~~~~~~~~v~~~~~-----~~~~~~l~s~~~d~~i~~w~ 276 (583)
.+....++-.|+++.+--+ ..+.+|+.+.+.. +... .-......+-+| .+++--++.|-.-|.+.+.+
T Consensus 125 ~~~~~~~~~~gd~lcFnvg--~~lyv~~~~g~~~~~~pi~k~-~y~gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~id 201 (636)
T KOG2394|consen 125 IVTNTNQSGKGDRLCFNVG--RELYVYSYRGAADLSKPIDKR-EYKGTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLID 201 (636)
T ss_pred ceeeccccCCCCEEEEecC--CeEEEEEccCcchhccchhhh-cccCCCCceecccccccCCCCcceEEeeccCceEEec
Confidence 3445555556664444444 3588888774321 1111 011122233344 34566677787888888884
Q ss_pred ccCCCCCceee--EEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcccc
Q psy14906 277 FDKADGNGRLL--RIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNE 354 (583)
Q Consensus 277 ~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (583)
.... +...+ ....-....++++.|.|.+...++.+-.+|.++++|......
T Consensus 202 p~~~--~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~------------------------- 254 (636)
T KOG2394|consen 202 PINF--EVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCG------------------------- 254 (636)
T ss_pred chhh--HHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeecccccc-------------------------
Confidence 3211 11111 011113468999999997788888888999999998632110
Q ss_pred ccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCc
Q psy14906 355 KFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434 (583)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 434 (583)
..-.+....+++..+.+....+
T Consensus 255 ----------------------------------------------------------~t~p~~~~~k~~~~f~i~t~ks 276 (636)
T KOG2394|consen 255 ----------------------------------------------------------ATAPSYQALKDGDQFAILTSKS 276 (636)
T ss_pred ----------------------------------------------------------CCCCcccccCCCCeeEEeeeec
Confidence 0011112223344443332211
Q ss_pred eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee-ccCCeeeEEeccC
Q psy14906 435 HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQE 513 (583)
Q Consensus 435 ~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~~ 513 (583)
. .+..++..+ ..-.+.|..++|+|||++||+.+.||.+||+|+.+. +++..++ .-+...|++||||
T Consensus 277 k------~~rNPv~~w-----~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~--eLlg~mkSYFGGLLCvcWSPD 343 (636)
T KOG2394|consen 277 K------KTRNPVARW-----HIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQ--ELLGVMKSYFGGLLCVCWSPD 343 (636)
T ss_pred c------ccCCcccee-----EeccccccceeEcCCCceEEEEecCceEEEeeccHH--HHHHHHHhhccceEEEEEcCC
Confidence 1 111233333 233458999999999999999999999999999987 6655443 3478999999999
Q ss_pred CcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecC-----------------------------------CC--
Q psy14906 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSP-----------------------------------DS-- 556 (583)
Q Consensus 514 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~-----------------------------------d~-- 556 (583)
|+++++|++|--|.||.+..++.+..-.+|++.|..++|.| ++
T Consensus 344 GKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~ 423 (636)
T KOG2394|consen 344 GKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCP 423 (636)
T ss_pred ccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCc
Confidence 99999999999999999999999999999999999999982 01
Q ss_pred -----------cEEEEEeCCCeEEEEeCCCccc
Q psy14906 557 -----------RWLITASMDCTIRVWDIPSSQL 578 (583)
Q Consensus 557 -----------~~l~s~~~d~~i~vw~~~~~~~ 578 (583)
-++.+.+.|..+.+||+....+
T Consensus 424 ~s~~~~~~~v~YRfGSVGqDTqlcLWDlteD~L 456 (636)
T KOG2394|consen 424 LSSFNRINSVTYRFGSVGQDTQLCLWDLTEDVL 456 (636)
T ss_pred ccccccccceEEEeecccccceEEEEecchhhc
Confidence 1477889999999999975443
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.5e-17 Score=158.11 Aligned_cols=235 Identities=13% Similarity=0.104 Sum_probs=161.2
Q ss_pred CCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC---CeEEEEEccCCCCCceeeEEeccCCCCCeeEEE
Q psy14906 226 TGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD---NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQF 302 (583)
Q Consensus 226 dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~ 302 (583)
+..|.+||..... ...+ ..|...+.+..|+|||+.|+.++.+ ..|.+|+++ ++..+.+..+.+| ...++|
T Consensus 183 ~~~i~i~d~dg~~-~~~l-t~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~--tg~~~~l~~~~g~---~~~~~w 255 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIV-NRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLR--SGARKVVASFRGH---NGAPAF 255 (429)
T ss_pred eEEEEEECCCCCC-ceEe-ccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCC--CCceEEEecCCCc---cCceeE
Confidence 4689999987544 4445 4677889999999999999887654 468899664 3333444444444 346899
Q ss_pred eeCCCCEEEEee-CCCcEEEE--EccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEE
Q psy14906 303 YGNSSDNILSAA-GDSTLRIF--NTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAA 379 (583)
Q Consensus 303 ~~~~~~~l~~~~-~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (583)
+| |++.|+.++ .+|.+.+| |+.++...+ +.
T Consensus 256 SP-DG~~La~~~~~~g~~~Iy~~d~~~~~~~~-lt--------------------------------------------- 288 (429)
T PRK01742 256 SP-DGSRLAFASSKDGVLNIYVMGANGGTPSQ-LT--------------------------------------------- 288 (429)
T ss_pred CC-CCCEEEEEEecCCcEEEEEEECCCCCeEe-ec---------------------------------------------
Confidence 98 788887764 67776665 443332111 00
Q ss_pred EecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe-cCceEEEEEcccCccccccCCCCCCCc
Q psy14906 380 IHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRFNIQSGAHRGSYGHDNQPGH 458 (583)
Q Consensus 380 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~h 458 (583)
.+...+....|+|||+.++..+ .+|...+|++......... ..+
T Consensus 289 ------------------------------~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~-----l~~ 333 (429)
T PRK01742 289 ------------------------------SGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASL-----VGG 333 (429)
T ss_pred ------------------------------cCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEE-----ecC
Confidence 0013466789999999877655 5678888877543221122 122
Q ss_pred ccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEcc--ccce
Q psy14906 459 VGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID--TCTI 536 (583)
Q Consensus 459 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~--~~~~ 536 (583)
.. ....|+|||++|+..+.++ +.+||+.++ +...... ........|+|||++|+.++.++...+|++. +|+.
T Consensus 334 ~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g--~~~~lt~-~~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~ 407 (429)
T PRK01742 334 RG--YSAQISADGKTLVMINGDN-VVKQDLTSG--STEVLSS-TFLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRF 407 (429)
T ss_pred CC--CCccCCCCCCEEEEEcCCC-EEEEECCCC--CeEEecC-CCCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCc
Confidence 22 4578999999998887765 666999877 4332222 2234567899999999999999988888763 5788
Q ss_pred EEeecccccceeeEEecCC
Q psy14906 537 IRKLSGHMGQLTDADFSPD 555 (583)
Q Consensus 537 ~~~~~~h~~~v~~l~~s~d 555 (583)
+..+.+|.+.+...+|+|-
T Consensus 408 ~~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 408 KARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred eEEccCCCCCCCCcccCCC
Confidence 8889889888999999984
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.2e-15 Score=123.57 Aligned_cols=274 Identities=12% Similarity=0.228 Sum_probs=185.4
Q ss_pred EEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCC--eEEEEe-eCeEE-EEEcC------CeEEEEe-ccceee
Q psy14906 36 ARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDD--ITCLSS-DFFHI-YTSAN------NIIYAWR-RGIDIV 104 (583)
Q Consensus 36 ~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~--v~~~~~-~~~~~-~~~~~------~~i~vw~-~~~~~~ 104 (583)
+.|. .+.-.++++.+.-.+||+++-.+.......+.+. +.-|-| ...++ ++|.+ +.|.||| ...+++
T Consensus 11 vs~N--QD~ScFava~~~Gfriyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~~~i 88 (346)
T KOG2111|consen 11 VSFN--QDHSCFAVATDTGFRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKERCI 88 (346)
T ss_pred EEEc--cCCceEEEEecCceEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccCcEE
Confidence 6674 4444577778889999998875544333333333 223333 33333 34333 3899999 445555
Q ss_pred eeecccCccEEEEccCCCEEEEEeCCCcEEEEEcC-CCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEE-Eec
Q psy14906 105 GTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIK-AEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV-GLS 182 (583)
Q Consensus 105 ~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~ 182 (583)
.++. ...+|.++.-....|++.- ++.|+||... +.+.+..+... .......++.-+.+..+||. |..
T Consensus 89 ~el~-f~~~I~~V~l~r~riVvvl-~~~I~VytF~~n~k~l~~~et~---------~NPkGlC~~~~~~~k~~LafPg~k 157 (346)
T KOG2111|consen 89 IELS-FNSEIKAVKLRRDRIVVVL-ENKIYVYTFPDNPKLLHVIETR---------SNPKGLCSLCPTSNKSLLAFPGFK 157 (346)
T ss_pred EEEE-eccceeeEEEcCCeEEEEe-cCeEEEEEcCCChhheeeeecc---------cCCCceEeecCCCCceEEEcCCCc
Confidence 5554 5677888877777787775 7899999998 45566655522 22233444444445556655 445
Q ss_pred CCeEEEEEccCCce--eEEEeccCCCeEEEEEecCCCCEEEEEcCCCc-EEEEeCCCCeehhhhhhcc-ccceEEEEEec
Q psy14906 183 NKKIILHNILTDES--LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGH-LTVWNLEDRQVENQIKKAH-RKVVTGAHFLY 258 (583)
Q Consensus 183 d~~i~iw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~-i~vwd~~~~~~~~~~~~~~-~~~v~~~~~~~ 258 (583)
-|.|+|-|+...+. ...+..|...|.|++.+.+|. ++|+++..|+ |||||..+|+++.++++|- ...|.+++|+|
T Consensus 158 ~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt-~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp 236 (346)
T KOG2111|consen 158 TGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGT-LVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSP 236 (346)
T ss_pred cceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCcc-EEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCC
Confidence 69999999986655 477889999999999999999 9999999998 8999999999999986664 45899999999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCce----------e----------eEEeccCCCCCeeEEEeeCCCCEEEEeeCCCc
Q psy14906 259 NEPLLVTSSPDNTLKLWIFDKADGNGR----------L----------LRIREGHSAPPNYIQFYGNSSDNILSAAGDST 318 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~w~~~~~~~~~~----------~----------~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 318 (583)
+..+|++++..|++.++.+.......+ . +..+.-..++..-++|-. +.+.++..+.||.
T Consensus 237 ~~s~LavsSdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~~~~~~~~fg~-~~nsvi~i~~Dgs 315 (346)
T KOG2111|consen 237 NSSWLAVSSDKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQGTQCIIAFGS-ETNTVIAICADGS 315 (346)
T ss_pred CccEEEEEcCCCeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccCCCcEEEEecC-CCCeEEEEEeCCc
Confidence 999999999999999998765332111 0 111112234445556653 3356666667777
Q ss_pred EEEEEc
Q psy14906 319 LRIFNT 324 (583)
Q Consensus 319 i~iwd~ 324 (583)
.+-+.+
T Consensus 316 y~k~~f 321 (346)
T KOG2111|consen 316 YYKFKF 321 (346)
T ss_pred EEEEEe
Confidence 654433
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.2e-15 Score=132.06 Aligned_cols=323 Identities=13% Similarity=0.165 Sum_probs=210.3
Q ss_pred CcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEE-------c---CCCcEEE
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG-------S---NTGHLTV 231 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-------~---~dg~i~v 231 (583)
..+++..+++++|+++|.+.. ..++|++..+++.+.+.... .++++.|+|-+. +|.+- . ..-.+++
T Consensus 34 ~~~~~v~~~S~~G~lfA~~~~-~~v~i~~~~~~~~~lt~~~~--~~~~L~fSP~g~-yL~T~e~~~i~~~~~~~~pn~~v 109 (566)
T KOG2315|consen 34 SRPCNVFAYSNNGRLFAYSDN-QVVKVFEIATLKVVLCVELK--KTYDLLFSPKGN-YLLTWEPWAIYGPKNASNPNVLV 109 (566)
T ss_pred CCcceeEEEcCCCcEEEEEcC-CeEEEEEccCCcEEEEeccc--eeeeeeeccccc-ccccccccccccCCCCCCCceee
Confidence 445778899999999987754 58999999888655444433 899999999998 55542 1 1245889
Q ss_pred EeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeC-CCCEE
Q psy14906 232 WNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGN-SSDNI 310 (583)
Q Consensus 232 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l 310 (583)
|+.+++.....+....+.. ++..|+.|..+.+-- ..+.+.+|++... ..... .-|...|..+.++|. ....+
T Consensus 110 ~~vet~~~~s~~q~k~Q~~-W~~qfs~dEsl~arl-v~nev~f~~~~~f---~~~~~--kl~~~~i~~f~lSpgp~~~~v 182 (566)
T KOG2315|consen 110 YNVETGVQRSQIQKKMQNG-WVPQFSIDESLAARL-VSNEVQFYDLGSF---KTIQH--KLSVSGITMLSLSPGPEPPFV 182 (566)
T ss_pred eeeccceehhheehhhhcC-cccccccchhhhhhh-hcceEEEEecCCc---cceee--eeeccceeeEEecCCCCCceE
Confidence 9999976666663333333 688999988654332 3567999966531 12222 234667888888873 22333
Q ss_pred EE-----eeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCc
Q psy14906 311 LS-----AAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKN 385 (583)
Q Consensus 311 ~~-----~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (583)
++ .+.-+.+++|........+.+...++ -.
T Consensus 183 AvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksF------------------------------------------Fk--- 217 (566)
T KOG2315|consen 183 AVYVPEKKGAPASVRIYKYPEEGQHQPVANKSF------------------------------------------FK--- 217 (566)
T ss_pred EEEccCCCCCCcEEEEeccccccccchhhhccc------------------------------------------cc---
Confidence 32 23445677777653222211111000 00
Q ss_pred eEEEeecCcccccceeeecccccccCCCCceEEEEccCCcE-EEEEe-----------cCceEEEEEcccCccccccCCC
Q psy14906 386 KVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNF-VLIGY-----------SSGHVDRFNIQSGAHRGSYGHD 453 (583)
Q Consensus 386 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~-----------~dg~i~i~d~~~~~~~~~~~~~ 453 (583)
..-..+.|++-|.- |+..+ .+..+++++++.......+
T Consensus 218 ---------------------------adkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L--- 267 (566)
T KOG2315|consen 218 ---------------------------ADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPL--- 267 (566)
T ss_pred ---------------------------cceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEec---
Confidence 11123334443321 11111 2346888887744444443
Q ss_pred CCCCcccCeeEEEEeCCCcEEEE--eecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeC---CceEEE
Q psy14906 454 NQPGHVGGVRGVVSDNLNQIVIS--GGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLD---DFTVNI 528 (583)
Q Consensus 454 ~~~~h~~~v~~~~~s~~~~~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~i 528 (583)
...++|.++.|+|+++-++. |-.--.+.|+|++.. ++..+ ..++-+++-|+|.|++++.++- .|.+.|
T Consensus 268 ---~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~~---~v~df-~egpRN~~~fnp~g~ii~lAGFGNL~G~mEv 340 (566)
T KOG2315|consen 268 ---LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRGK---PVFDF-PEGPRNTAFFNPHGNIILLAGFGNLPGDMEV 340 (566)
T ss_pred ---CCCCCceEEEECCCCCEEEEEEecccceEEEEcCCCC---EeEeC-CCCCccceEECCCCCEEEEeecCCCCCceEE
Confidence 45799999999999976544 446678999998763 33333 2457789999999998887665 489999
Q ss_pred EEccccceEEeecccccceeeEEecCCCcEEEEEe------CCCeEEEEeCCCccccc
Q psy14906 529 IDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS------MDCTIRVWDIPSSQLID 580 (583)
Q Consensus 529 ~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~------~d~~i~vw~~~~~~~~~ 580 (583)
||+.+.+++..+.... -+-..|+|||++++|+. .|+.++||+. +|.++.
T Consensus 341 wDv~n~K~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy-tG~~l~ 395 (566)
T KOG2315|consen 341 WDVPNRKLIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY-TGSLLH 395 (566)
T ss_pred EeccchhhccccccCC--ceEEEEcCCCcEEEEEeccccEEecCCeEEEEe-cCceee
Confidence 9999999988887543 35579999999999886 3788999998 466654
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=8e-16 Score=138.90 Aligned_cols=285 Identities=18% Similarity=0.196 Sum_probs=204.7
Q ss_pred cCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q psy14906 203 TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282 (583)
Q Consensus 203 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~ 282 (583)
+...-+.|..+|||+|++++|...-.|++||+.+-.+...- .-....|.-.-.+.|-..++.-..|.+|.+..-
T Consensus 50 ~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFER-hlDae~V~feiLsDD~SK~v~L~~DR~IefHak----- 123 (703)
T KOG2321|consen 50 MPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFER-HLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAK----- 123 (703)
T ss_pred CccccceeEecCCCcEEEEecccCCceEEEEcccceeeeee-cccccceeEEEeccchhhheEeecCceeeehhh-----
Confidence 44677899999999999999999999999999876554332 112234444445555555666667888777621
Q ss_pred CceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccc
Q psy14906 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVS 362 (583)
Q Consensus 283 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (583)
.+.....-- ...-..++++..+..+++ ++....|+-++++.|..+..+....
T Consensus 124 ~G~hy~~RI--P~~GRDm~y~~~scDly~-~gsg~evYRlNLEqGrfL~P~~~~~------------------------- 175 (703)
T KOG2321|consen 124 YGRHYRTRI--PKFGRDMKYHKPSCDLYL-VGSGSEVYRLNLEQGRFLNPFETDS------------------------- 175 (703)
T ss_pred cCeeeeeec--CcCCccccccCCCccEEE-eecCcceEEEEcccccccccccccc-------------------------
Confidence 122211111 122355666654444444 4444678899999988766552211
Q ss_pred eeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcc
Q psy14906 363 QFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQ 442 (583)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~ 442 (583)
..+.++.+++...+|++|+.+|.|..||.+
T Consensus 176 --------------------------------------------------~~lN~v~in~~hgLla~Gt~~g~VEfwDpR 205 (703)
T KOG2321|consen 176 --------------------------------------------------GELNVVSINEEHGLLACGTEDGVVEFWDPR 205 (703)
T ss_pred --------------------------------------------------ccceeeeecCccceEEecccCceEEEecch
Confidence 468899999999999999999999999999
Q ss_pred cCccccccCCCC-CCCccc-----CeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccC--CeeeEEeccCC
Q psy14906 443 SGAHRGSYGHDN-QPGHVG-----GVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN--GISFFRTHQES 514 (583)
Q Consensus 443 ~~~~~~~~~~~~-~~~h~~-----~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~v~~~~~s~~~ 514 (583)
+......+.... ...|.+ .|+++.|+.+|-.++.|..+|.+.|||++.. +++..-.|.. +|..+.|.+.+
T Consensus 206 ~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~--~pl~~kdh~~e~pi~~l~~~~~~ 283 (703)
T KOG2321|consen 206 DKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRAS--KPLLVKDHGYELPIKKLDWQDTD 283 (703)
T ss_pred hhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccC--CceeecccCCccceeeecccccC
Confidence 877766653221 123434 4999999999999999999999999999998 7776666654 78889997753
Q ss_pred c-EEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 515 S-MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 515 ~-~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
. --++..+...++|||-.+|+....+. ....++.+++-|++.+++++-++..+..|=+.
T Consensus 284 ~q~~v~S~Dk~~~kiWd~~~Gk~~asiE-pt~~lND~C~~p~sGm~f~Ane~~~m~~yyiP 343 (703)
T KOG2321|consen 284 QQNKVVSMDKRILKIWDECTGKPMASIE-PTSDLNDFCFVPGSGMFFTANESSKMHTYYIP 343 (703)
T ss_pred CCceEEecchHHhhhcccccCCceeecc-ccCCcCceeeecCCceEEEecCCCcceeEEcc
Confidence 3 23333445689999999999988887 45569999999999999999888877666554
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=9e-15 Score=132.14 Aligned_cols=368 Identities=13% Similarity=0.146 Sum_probs=225.9
Q ss_pred cCCeEEEEeccc-e-eeeeec----ccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCc
Q psy14906 90 ANNIIYAWRRGI-D-IVGTYK----GHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS 163 (583)
Q Consensus 90 ~~~~i~vw~~~~-~-~~~~~~----~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (583)
..-.+.+|..-+ . ...++. .+...+.+.|++|+++|.+. +..++|++..++..+.+.. ..
T Consensus 9 sSe~~~l~~~~~~~~~~~~f~~~~~~~~~~v~~~S~~G~lfA~~~-~~~v~i~~~~~~~~~lt~~-------------~~ 74 (566)
T KOG2315|consen 9 SSEGFYLFNGPGSKDAVTVFEQNKTSRPCNVFAYSNNGRLFAYSD-NQVVKVFEIATLKVVLCVE-------------LK 74 (566)
T ss_pred ccceeEEeccCCccccccccccCCCCCcceeEEEcCCCcEEEEEc-CCeEEEEEccCCcEEEEec-------------cc
Confidence 445677787422 1 122222 22333555599999888764 7889999999986555443 22
Q ss_pred ceEEEeeCCCCCEEEEE-----ec-----CCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q psy14906 164 CVNVLEPSPVVDIIGVG-----LS-----NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWN 233 (583)
Q Consensus 164 ~i~~~~~s~~~~~l~~~-----~~-----d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 233 (583)
.+.++.|+|.|.+|.+- .. .-.+.+|+++++.....+......-++..|+.|.. +++--..+.+++|+
T Consensus 75 ~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~W~~qfs~dEs--l~arlv~nev~f~~ 152 (566)
T KOG2315|consen 75 KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQIQKKMQNGWVPQFSIDES--LAARLVSNEVQFYD 152 (566)
T ss_pred eeeeeeecccccccccccccccccCCCCCCCceeeeeeccceehhheehhhhcCcccccccchh--hhhhhhcceEEEEe
Confidence 88999999999998862 11 24578999999766666664433337899999986 44444457899999
Q ss_pred CCCCeehhhhhhccccceEEEEEecCCC--EEEE-----EeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC
Q psy14906 234 LEDRQVENQIKKAHRKVVTGAHFLYNEP--LLVT-----SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306 (583)
Q Consensus 234 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s-----~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 306 (583)
+.+.+.... .-|...|+.+.++|.+. .+|+ .|.-+.++||.+.... ....+..-.-....=..+.|.+..
T Consensus 153 ~~~f~~~~~--kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~-~~~~~a~ksFFkadkvqm~WN~~g 229 (566)
T KOG2315|consen 153 LGSFKTIQH--KLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEG-QHQPVANKSFFKADKVQMKWNKLG 229 (566)
T ss_pred cCCccceee--eeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEecccccc-ccchhhhccccccceeEEEeccCC
Confidence 987433322 24778899999998733 3333 3556789999654111 111111111111222345666532
Q ss_pred CCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCce
Q psy14906 307 SDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNK 386 (583)
Q Consensus 307 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (583)
...|+.++.| ++... ..-.+...
T Consensus 230 t~LLvLastd-------VDktn--------------------------------------------------~SYYGEq~ 252 (566)
T KOG2315|consen 230 TALLVLASTD-------VDKTN--------------------------------------------------ASYYGEQT 252 (566)
T ss_pred ceEEEEEEEe-------ecCCC--------------------------------------------------ccccccce
Confidence 2333333321 11000 00011112
Q ss_pred EEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEE--EecCceEEEEEcccCccccccCCCCCCCcccCeeE
Q psy14906 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLI--GYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRG 464 (583)
Q Consensus 387 i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~ 464 (583)
+++.++.... ........++|.++.|+|+++-+++ |..-..+.|||++ +..+..+ ..++-++
T Consensus 253 Lyll~t~g~s--------~~V~L~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df-------~egpRN~ 316 (566)
T KOG2315|consen 253 LYLLATQGES--------VSVPLLKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF-------PEGPRNT 316 (566)
T ss_pred EEEEEecCce--------EEEecCCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC-------CCCCccc
Confidence 2222222100 0011111278999999999976554 6667889999986 4444443 4566789
Q ss_pred EEEeCCCcEEEEeec---CCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeC------CceEEEEEccccc
Q psy14906 465 VVSDNLNQIVISGGN---DQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLD------DFTVNIIDIDTCT 535 (583)
Q Consensus 465 ~~~s~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~i~d~~~~~ 535 (583)
+-|+|.|++++.+|- -|.+-+||..+. +++..+... .-+-+.|+|||+++++++. |+.++||+.. |.
T Consensus 317 ~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~--K~i~~~~a~-~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhyt-G~ 392 (566)
T KOG2315|consen 317 AFFNPHGNIILLAGFGNLPGDMEVWDVPNR--KLIAKFKAA-NTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYT-GS 392 (566)
T ss_pred eEECCCCCEEEEeecCCCCCceEEEeccch--hhccccccC-CceEEEEcCCCcEEEEEeccccEEecCCeEEEEec-Cc
Confidence 999999999988774 478999999987 777666544 3456799999999998875 6789999986 55
Q ss_pred eEEeecccccceeeEEecC
Q psy14906 536 IIRKLSGHMGQLTDADFSP 554 (583)
Q Consensus 536 ~~~~~~~h~~~v~~l~~s~ 554 (583)
++....-. +....+.|-|
T Consensus 393 ~l~~~~f~-sEL~qv~W~P 410 (566)
T KOG2315|consen 393 LLHEKMFK-SELLQVEWRP 410 (566)
T ss_pred eeehhhhh-HhHhheeeee
Confidence 54332211 1466677765
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.4e-15 Score=145.67 Aligned_cols=236 Identities=13% Similarity=0.098 Sum_probs=158.2
Q ss_pred cEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec---CCeEEEEEccCCceeEEEeccCCCeE
Q psy14906 132 NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS---NKKIILHNILTDESLMEFIQTWGPVT 208 (583)
Q Consensus 132 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~v~ 208 (583)
.|.+||.+.... ..+. .+...+...+|||||+.|+..+. +..|.+|++.+++..... ...+.+.
T Consensus 180 ~l~~~d~dg~~~-~~lt-----------~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~-~~~~~~~ 246 (429)
T PRK03629 180 ELRVSDYDGYNQ-FVVH-----------RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA-SFPRHNG 246 (429)
T ss_pred eEEEEcCCCCCC-EEee-----------cCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEcc-CCCCCcC
Confidence 699999886543 3333 45678999999999999987643 357999999887644322 2224456
Q ss_pred EEEEecCCCCEEEEEcCCC--cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC-CCeEEEEEccCCCCCce
Q psy14906 209 ALSFRTDGPPMMVSGSNTG--HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNGR 285 (583)
Q Consensus 209 ~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~~ 285 (583)
..+|+|||+.++++.+.+| .|.+||+++++..... .+...+....|+|||+.|+..+. ++...+|.++...+..+
T Consensus 247 ~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~lt--~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~ 324 (429)
T PRK03629 247 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVT--DGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ 324 (429)
T ss_pred CeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEcc--CCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE
Confidence 7899999995555555555 4889999887654433 33456788999999998877665 45667886665543322
Q ss_pred eeEEeccCCCCCeeEEEeeCCCCEEEEeeCC---CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccc
Q psy14906 286 LLRIREGHSAPPNYIQFYGNSSDNILSAAGD---STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVS 362 (583)
Q Consensus 286 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (583)
.+..+........|+| ||++|+..+.+ ..|.+||+.++... .+..
T Consensus 325 ---~lt~~~~~~~~~~~Sp-DG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~--------------------------- 372 (429)
T PRK03629 325 ---RITWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTD--------------------------- 372 (429)
T ss_pred ---EeecCCCCccCEEECC-CCCEEEEEEccCCCceEEEEECCCCCeE-EeCC---------------------------
Confidence 2223334456788997 78888776543 34777777655321 1100
Q ss_pred eeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCce---EEEE
Q psy14906 363 QFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGH---VDRF 439 (583)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~---i~i~ 439 (583)
. .......|+|||+.++..+.++. +.++
T Consensus 373 -------------------------------------------~------~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~ 403 (429)
T PRK03629 373 -------------------------------------------T------FLDETPSIAPNGTMVIYSSSQGMGSVLNLV 403 (429)
T ss_pred -------------------------------------------C------CCCCCceECCCCCEEEEEEcCCCceEEEEE
Confidence 0 11234679999999999887764 6667
Q ss_pred EcccCccccccCCCCCCCcccCeeEEEEeC
Q psy14906 440 NIQSGAHRGSYGHDNQPGHVGGVRGVVSDN 469 (583)
Q Consensus 440 d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 469 (583)
++ +|.....+ ..|.+.+...+|+|
T Consensus 404 ~~-~G~~~~~l-----~~~~~~~~~p~Wsp 427 (429)
T PRK03629 404 ST-DGRFKARL-----PATDGQVKFPAWSP 427 (429)
T ss_pred EC-CCCCeEEC-----ccCCCCcCCcccCC
Confidence 76 45555555 56888889999987
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-14 Score=121.79 Aligned_cols=272 Identities=14% Similarity=0.194 Sum_probs=175.0
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEE-EeCC------CeEEEEEcc
Q psy14906 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT-SSPD------NTLKLWIFD 278 (583)
Q Consensus 206 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~d------~~i~~w~~~ 278 (583)
...+++|+.|.. -+++|..+| .++|+.+.-+...+. ..+.+.+.-+...-..++|+- ||.+ +.+.||| |
T Consensus 7 ~~lsvs~NQD~S-cFava~~~G-friyn~~P~ke~~~r-~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWD-D 82 (346)
T KOG2111|consen 7 KTLSVSFNQDHS-CFAVATDTG-FRIYNCDPFKESASR-QFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWD-D 82 (346)
T ss_pred ceeEEEEccCCc-eEEEEecCc-eEEEecCchhhhhhh-ccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEe-c
Confidence 455699999988 677777654 999998864433322 222222222222223344443 3322 5799996 3
Q ss_pred CCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccc-cccceeeccchhhhhhhhhhcchhccccccC
Q psy14906 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS-ETSNKNLGIASANRNNLKRKNRLEKMNEKFI 357 (583)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (583)
. ..+++.++. ...+|.++.+.+ ++|++.- ++.|++|...+ .+.+..+.
T Consensus 83 ~---k~~~i~el~-f~~~I~~V~l~r---~riVvvl-~~~I~VytF~~n~k~l~~~e----------------------- 131 (346)
T KOG2111|consen 83 L---KERCIIELS-FNSEIKAVKLRR---DRIVVVL-ENKIYVYTFPDNPKLLHVIE----------------------- 131 (346)
T ss_pred c---cCcEEEEEE-eccceeeEEEcC---CeEEEEe-cCeEEEEEcCCChhheeeee-----------------------
Confidence 2 455555554 467899999864 4666654 46899998863 33222221
Q ss_pred CCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEE-EecCceE
Q psy14906 358 LPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLI-GYSSGHV 436 (583)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~dg~i 436 (583)
...+. ....+++-..+..+||. |..-|.|
T Consensus 132 ----------------------------------t~~NP----------------kGlC~~~~~~~k~~LafPg~k~Gqv 161 (346)
T KOG2111|consen 132 ----------------------------------TRSNP----------------KGLCSLCPTSNKSLLAFPGFKTGQV 161 (346)
T ss_pred ----------------------------------cccCC----------------CceEeecCCCCceEEEcCCCccceE
Confidence 11000 11222222223344444 4456999
Q ss_pred EEEEcccCccc--cccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCc-EEEEEccCCCCCceEEeecc---CCeeeEEe
Q psy14906 437 DRFNIQSGAHR--GSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT-VKVWHFKQTGKPPLRSIKLD---NGISFFRT 510 (583)
Q Consensus 437 ~i~d~~~~~~~--~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~---~~v~~~~~ 510 (583)
+|-|+...+.- ..+ .+|...|.|++++.+|.++||++..|+ |||||..++ .++..++-. ..|.+++|
T Consensus 162 Qi~dL~~~~~~~p~~I-----~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g--~~l~E~RRG~d~A~iy~iaF 234 (346)
T KOG2111|consen 162 QIVDLASTKPNAPSII-----NAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDG--TLLQELRRGVDRADIYCIAF 234 (346)
T ss_pred EEEEhhhcCcCCceEE-----EcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCC--cEeeeeecCCchheEEEEEe
Confidence 99999866552 333 699999999999999999999999998 899999999 888877643 58999999
Q ss_pred ccCCcEEEEEeCCceEEEEEccccceE------------------------EeecccccceeeEEecCCCcEEEEEeCCC
Q psy14906 511 HQESSMLAVCLDDFTVNIIDIDTCTII------------------------RKLSGHMGQLTDADFSPDSRWLITASMDC 566 (583)
Q Consensus 511 s~~~~~l~~~~~dg~i~i~d~~~~~~~------------------------~~~~~h~~~v~~l~~s~d~~~l~s~~~d~ 566 (583)
||++.+||++++.|+++||.++....- ..+.-..+...-++|-.+.+.++..+.||
T Consensus 235 Sp~~s~LavsSdKgTlHiF~l~~~~~~~~~~SSl~~~~~~lpky~~S~wS~~~f~l~~~~~~~~~fg~~~nsvi~i~~Dg 314 (346)
T KOG2111|consen 235 SPNSSWLAVSSDKGTLHIFSLRDTENTEDESSSLSFKRLVLPKYFSSEWSFAKFQLPQGTQCIIAFGSETNTVIAICADG 314 (346)
T ss_pred CCCccEEEEEcCCCeEEEEEeecCCCCccccccccccccccchhcccceeEEEEEccCCCcEEEEecCCCCeEEEEEeCC
Confidence 999999999999999999988642211 01111233445566766645666666777
Q ss_pred eEE
Q psy14906 567 TIR 569 (583)
Q Consensus 567 ~i~ 569 (583)
+-+
T Consensus 315 sy~ 317 (346)
T KOG2111|consen 315 SYY 317 (346)
T ss_pred cEE
Confidence 654
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=99.74 E-value=8.9e-14 Score=135.01 Aligned_cols=181 Identities=16% Similarity=0.093 Sum_probs=149.0
Q ss_pred eCeEEEEEcCCeEEEEeccceeeeeecccCccEEE-------EccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCce
Q psy14906 82 DFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHL-------ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTF 154 (583)
Q Consensus 82 ~~~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~-------is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 154 (583)
+.+.+.+..++.+.+||.....+..-..+.....- ++++.-++++|+.-+.|.+|+......-..+.
T Consensus 99 ~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~~l~------ 172 (967)
T KOG0974|consen 99 NKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPIRLK------ 172 (967)
T ss_pred cceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcceec------
Confidence 45778888999999999765544444444444332 27888899999999999999988433333444
Q ss_pred EEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeE-EEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q psy14906 155 KIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLM-EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWN 233 (583)
Q Consensus 155 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 233 (583)
+|.+.|..+.++.||+++++.+.|.++++|++++.+... ..-+|+..|..+.|.|+ .+++++.|.+.++|+
T Consensus 173 -----GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n---~i~t~gedctcrvW~ 244 (967)
T KOG0974|consen 173 -----GHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN---RIITVGEDCTCRVWG 244 (967)
T ss_pred -----ccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc---eeEEeccceEEEEEe
Confidence 999999999999999999999999999999999988776 66689999999999998 599999999999997
Q ss_pred CCCCeehhhhhhcc-ccceEEEEEecCCCEEEEEeCCCeEEEEEcc
Q psy14906 234 LEDRQVENQIKKAH-RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 234 ~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 278 (583)
.+ ++.+..+ .+| ...+..++..++...++|++.|+.+++|++.
T Consensus 245 ~~-~~~l~~y-~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~ 288 (967)
T KOG0974|consen 245 VN-GTQLEVY-DEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLN 288 (967)
T ss_pred cc-cceehhh-hhhhhcceeEEEEcCCceEEEeeccCcchhhhhhh
Confidence 76 4445577 555 4589999999999999999999999999764
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.7e-15 Score=126.97 Aligned_cols=283 Identities=10% Similarity=0.123 Sum_probs=190.2
Q ss_pred CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCC-CEEEEEeCCCeEEEEEccCCCCC
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNE-PLLVTSSPDNTLKLWIFDKADGN 283 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~w~~~~~~~~ 283 (583)
..+..++|++.-. -++++..|-.|++||-.. +....++......|++++|-|.+ ..|+.|+..| |.+|..+.....
T Consensus 99 ~dlr~~aWhqH~~-~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~ 175 (445)
T KOG2139|consen 99 IDLRGVAWHQHII-AFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNA 175 (445)
T ss_pred cceeeEeechhhh-hhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCccccc
Confidence 4678899999654 678888999999999876 55566645567799999999975 4677777654 999977654333
Q ss_pred ceee----------EEeccCCCCCeeEEEeeCCCCEEEEeeC-CCcEEEEEccccccceeeccchhhhhhhhhhcchhcc
Q psy14906 284 GRLL----------RIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKM 352 (583)
Q Consensus 284 ~~~~----------~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (583)
.+.+ ....+| .+|+++.|.+ ||..+++++. |..|.+||..++........
T Consensus 176 ~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~-dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~----------------- 236 (445)
T KOG2139|consen 176 NRNIRMMSTHHLQVLQDPGH-NPVTSMQWNE-DGTILVTASFGSSSIMIWDPDTGQKIPLIPK----------------- 236 (445)
T ss_pred ccccccccccchhheeCCCC-ceeeEEEEcC-CCCEEeecccCcceEEEEcCCCCCccccccc-----------------
Confidence 3321 223344 6899999996 8989998875 67899999988765432100
Q ss_pred ccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec
Q psy14906 353 NEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS 432 (583)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 432 (583)
..+.++-+.|||||.++++++-
T Consensus 237 ----------------------------------------------------------glgg~slLkwSPdgd~lfaAt~ 258 (445)
T KOG2139|consen 237 ----------------------------------------------------------GLGGFSLLKWSPDGDVLFAATC 258 (445)
T ss_pred ----------------------------------------------------------CCCceeeEEEcCCCCEEEEecc
Confidence 0156788999999999999999
Q ss_pred CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEE-------------e
Q psy14906 433 SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS-------------I 499 (583)
Q Consensus 433 dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------------~ 499 (583)
|+..++|+.......... .--.+.|...+|+|+|++|+.... |.-++|.+....+..... +
T Consensus 259 davfrlw~e~q~wt~erw-----~lgsgrvqtacWspcGsfLLf~~s-gsp~lysl~f~~~~~~~~~~~~~k~~lliaDL 332 (445)
T KOG2139|consen 259 DAVFRLWQENQSWTKERW-----ILGSGRVQTACWSPCGSFLLFACS-GSPRLYSLTFDGEDSVFLRPQSIKRVLLIADL 332 (445)
T ss_pred cceeeeehhcccceecce-----eccCCceeeeeecCCCCEEEEEEc-CCceEEEEeecCCCccccCcccceeeeeeccc
Confidence 999999965433322222 234558999999999987665543 344555543321111100 0
Q ss_pred ------e----ccCCeeeEEeccCCcEEEEEeCCc--------eEEEEEccccceEEee-cc--cccceeeEEecC---C
Q psy14906 500 ------K----LDNGISFFRTHQESSMLAVCLDDF--------TVNIIDIDTCTIIRKL-SG--HMGQLTDADFSP---D 555 (583)
Q Consensus 500 ------~----~~~~v~~~~~s~~~~~l~~~~~dg--------~i~i~d~~~~~~~~~~-~~--h~~~v~~l~~s~---d 555 (583)
. ..+++.+++|.|.|.+||+....+ .|.+||....-.+.-. -+ .......+.|+| +
T Consensus 333 ~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~ 412 (445)
T KOG2139|consen 333 QEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLKNE 412 (445)
T ss_pred hhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceEEeeecccC
Confidence 0 135788999999999999977654 3667776644332211 01 112255567766 5
Q ss_pred CcEEEEEeCCCeEEEEeC
Q psy14906 556 SRWLITASMDCTIRVWDI 573 (583)
Q Consensus 556 ~~~l~s~~~d~~i~vw~~ 573 (583)
+.+|..+=..|.+.-|++
T Consensus 413 g~lLsiaWsTGriq~ypl 430 (445)
T KOG2139|consen 413 GRLLSIAWSTGRIQRYPL 430 (445)
T ss_pred CcEEEEEeccCceEeeee
Confidence 666666666777776665
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.3e-17 Score=143.11 Aligned_cols=193 Identities=13% Similarity=0.126 Sum_probs=170.2
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCce
Q psy14906 117 ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDES 196 (583)
Q Consensus 117 is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~ 196 (583)
.+.+|++|+.++.-|.|-.+|+.++.....+. -...|..+.|-.+.+++|++- ...+.|||- .|..
T Consensus 137 ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~------------v~Etv~Dv~~LHneq~~AVAQ-K~y~yvYD~-~GtE 202 (545)
T KOG1272|consen 137 YTRNGRHLLLGGRKGHLAAFDWVTKKLHFEIN------------VMETVRDVTFLHNEQFFAVAQ-KKYVYVYDN-NGTE 202 (545)
T ss_pred ecCCccEEEecCCccceeeeecccceeeeeee------------hhhhhhhhhhhcchHHHHhhh-hceEEEecC-CCcE
Confidence 38899999999999999999999999988885 357889999999999999874 467999996 4888
Q ss_pred eEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEE
Q psy14906 197 LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWI 276 (583)
Q Consensus 197 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~ 276 (583)
+..++.| ..|..+.|.|..- +|++++..|.++--|+..|+.+..+ ..-.+.+..++-+|-+..+-+|...|+|.+|.
T Consensus 203 lHClk~~-~~v~rLeFLPyHf-LL~~~~~~G~L~Y~DVS~GklVa~~-~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWS 279 (545)
T KOG1272|consen 203 LHCLKRH-IRVARLEFLPYHF-LLVAASEAGFLKYQDVSTGKLVASI-RTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWS 279 (545)
T ss_pred Eeehhhc-Cchhhhcccchhh-eeeecccCCceEEEeechhhhhHHH-HccCCccchhhcCCccceEEEcCCCceEEecC
Confidence 8889888 8999999999875 8999999999999999999999999 56678889999999999999999999999994
Q ss_pred ccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccce
Q psy14906 277 FDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNK 331 (583)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 331 (583)
- . ...++..+..|.++|.++++.+ +|.++++.+.|..++|||++......
T Consensus 280 P--~--skePLvKiLcH~g~V~siAv~~-~G~YMaTtG~Dr~~kIWDlR~~~ql~ 329 (545)
T KOG1272|consen 280 P--N--SKEPLVKILCHRGPVSSIAVDR-GGRYMATTGLDRKVKIWDLRNFYQLH 329 (545)
T ss_pred C--C--CcchHHHHHhcCCCcceEEECC-CCcEEeecccccceeEeeeccccccc
Confidence 3 3 4566666778999999999997 89999999999999999998865443
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.4e-15 Score=136.34 Aligned_cols=236 Identities=16% Similarity=0.213 Sum_probs=168.5
Q ss_pred CeEEEEEcCCeEEEEeccc------eeee-eecccCccEEEE-----ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeecc
Q psy14906 83 FFHIYTSANNIIYAWRRGI------DIVG-TYKGHTSPVHLI-----LPFGPHLISVDEESNVKVWDIKAEETYLELSFD 150 (583)
Q Consensus 83 ~~~~~~~~~~~i~vw~~~~------~~~~-~~~~h~~~v~~i-----s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 150 (583)
|..++-.....+.+|+..+ ...+ .+.+-.-.-..+ .+.+--|+.+-..|.|.+.|....+..+.+...
T Consensus 135 gd~lcFnvg~~lyv~~~~g~~~~~~pi~k~~y~gt~P~cHdfn~~~a~~~g~dllIGf~tGqvq~idp~~~~~sklfne~ 214 (636)
T KOG2394|consen 135 GDRLCFNVGRELYVYSYRGAADLSKPIDKREYKGTSPTCHDFNSFTATPKGLDLLIGFTTGQVQLIDPINFEVSKLFNEE 214 (636)
T ss_pred CCEEEEecCCeEEEEEccCcchhccchhhhcccCCCCceecccccccCCCCcceEEeeccCceEEecchhhHHHHhhhhc
Confidence 3556666666777777532 1111 122222112222 677777888888899999887763222211111
Q ss_pred CCceEEecccCCcceEEEeeCCCC-CEEEEEecCCeEEEEEccC--------------C--------------ceeEEEe
Q psy14906 151 NDTFKIMGKRWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILT--------------D--------------ESLMEFI 201 (583)
Q Consensus 151 ~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~d~~i~iw~~~~--------------~--------------~~~~~~~ 201 (583)
.. -....++|+.|-|.+ ..++++..+|.+.+||..- + .++..+.
T Consensus 215 --r~-----i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~ 287 (636)
T KOG2394|consen 215 --RL-----INKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWH 287 (636)
T ss_pred --cc-----ccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeE
Confidence 00 235789999999854 4566677889999997531 1 1122222
Q ss_pred ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q psy14906 202 QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281 (583)
Q Consensus 202 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~ 281 (583)
.-.+.|...+|+|||+ +||+.+.||.+||||..+.+++..+ +.--+...|++|+|||++|++|++|-.|.||.+.
T Consensus 288 ~~~g~in~f~FS~DG~-~LA~VSqDGfLRvF~fdt~eLlg~m-kSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~--- 362 (636)
T KOG2394|consen 288 IGEGSINEFAFSPDGK-YLATVSQDGFLRIFDFDTQELLGVM-KSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFE--- 362 (636)
T ss_pred eccccccceeEcCCCc-eEEEEecCceEEEeeccHHHHHHHH-HhhccceEEEEEcCCccEEEecCCcceEEEEEec---
Confidence 3346889999999999 8999999999999999999888888 5667889999999999999999999999999775
Q ss_pred CCceeeEEeccCCCCCeeEEEeeC-----------------------------------------------CCCEEEEee
Q psy14906 282 GNGRLLRIREGHSAPPNYIQFYGN-----------------------------------------------SSDNILSAA 314 (583)
Q Consensus 282 ~~~~~~~~~~~~~~~v~~~~~~~~-----------------------------------------------~~~~l~~~~ 314 (583)
+.+.+..-++|...|..++|.|. ...++-+.+
T Consensus 363 -erRVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~s~~~~~~~v~YRfGSVG 441 (636)
T KOG2394|consen 363 -ERRVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPLSSFNRINSVTYRFGSVG 441 (636)
T ss_pred -cceEEEeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCcccccccccceEEEeeccc
Confidence 67888999999999999999731 012567788
Q ss_pred CCCcEEEEEccccccce
Q psy14906 315 GDSTLRIFNTKSETSNK 331 (583)
Q Consensus 315 ~dg~i~iwd~~~~~~~~ 331 (583)
.|-.+.+||+.......
T Consensus 442 qDTqlcLWDlteD~L~~ 458 (636)
T KOG2394|consen 442 QDTQLCLWDLTEDVLVP 458 (636)
T ss_pred ccceEEEEecchhhccc
Confidence 89999999997665433
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.7e-15 Score=140.51 Aligned_cols=234 Identities=12% Similarity=0.047 Sum_probs=155.0
Q ss_pred CcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC---CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEe
Q psy14906 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP---DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY 303 (583)
Q Consensus 227 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 303 (583)
..|.+||...... ..+ ..+...+...+|+|||+.|+..+. +..+.+|+++ .+..+.+..+.+ .+....|+
T Consensus 179 ~~l~~~d~dg~~~-~~l-t~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~--~G~~~~l~~~~~---~~~~~~~S 251 (429)
T PRK03629 179 YELRVSDYDGYNQ-FVV-HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLA--NGAVRQVASFPR---HNGAPAFS 251 (429)
T ss_pred eeEEEEcCCCCCC-EEe-ecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECC--CCCeEEccCCCC---CcCCeEEC
Confidence 3688999875443 333 345678999999999999887543 3467788654 333344443433 34568999
Q ss_pred eCCCCEEEEe-eCCC--cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEE
Q psy14906 304 GNSSDNILSA-AGDS--TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAI 380 (583)
Q Consensus 304 ~~~~~~l~~~-~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (583)
| ||+.|+.. +.+| .|++||+.++...+...
T Consensus 252 P-DG~~La~~~~~~g~~~I~~~d~~tg~~~~lt~---------------------------------------------- 284 (429)
T PRK03629 252 P-DGSKLAFALSKTGSLNLYVMDLASGQIRQVTD---------------------------------------------- 284 (429)
T ss_pred C-CCCEEEEEEcCCCCcEEEEEECCCCCEEEccC----------------------------------------------
Confidence 8 78877754 4444 47788877654321100
Q ss_pred ecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC-c--eEEEEEcccCccccccCCCCCCC
Q psy14906 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS-G--HVDRFNIQSGAHRGSYGHDNQPG 457 (583)
Q Consensus 381 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g--~i~i~d~~~~~~~~~~~~~~~~~ 457 (583)
....+....|+|||+.|+..+.+ | .|+++|+.+++.. .+ ..
T Consensus 285 ------------------------------~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~l-----t~ 328 (429)
T PRK03629 285 ------------------------------GRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RI-----TW 328 (429)
T ss_pred ------------------------------CCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-Ee-----ec
Confidence 00345678999999988877654 3 4555566665443 22 22
Q ss_pred cccCeeEEEEeCCCcEEEEeecC---CcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCce---EEEEEc
Q psy14906 458 HVGGVRGVVSDNLNQIVISGGND---QTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFT---VNIIDI 531 (583)
Q Consensus 458 h~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~---i~i~d~ 531 (583)
+........|+|||++|+..+.+ ..|.+||+.++ ... .+..........|+|||++|+..+.++. ++++++
T Consensus 329 ~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g--~~~-~Lt~~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~ 405 (429)
T PRK03629 329 EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG--GVQ-VLTDTFLDETPSIAPNGTMVIYSSSQGMGSVLNLVST 405 (429)
T ss_pred CCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCC--CeE-EeCCCCCCCCceECCCCCEEEEEEcCCCceEEEEEEC
Confidence 33445678999999998876543 35888998876 432 2322233456789999999999887764 677777
Q ss_pred cccceEEeecccccceeeEEecC
Q psy14906 532 DTCTIIRKLSGHMGQLTDADFSP 554 (583)
Q Consensus 532 ~~~~~~~~~~~h~~~v~~l~~s~ 554 (583)
+ |+....+.+|.+.+...+|+|
T Consensus 406 ~-G~~~~~l~~~~~~~~~p~Wsp 427 (429)
T PRK03629 406 D-GRFKARLPATDGQVKFPAWSP 427 (429)
T ss_pred C-CCCeEECccCCCCcCCcccCC
Confidence 4 666677888888899999987
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-14 Score=123.70 Aligned_cols=182 Identities=15% Similarity=0.200 Sum_probs=129.9
Q ss_pred CEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCC-CEEEEEecCCeEEEEEccCC----c-
Q psy14906 122 PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILTD----E- 195 (583)
Q Consensus 122 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~----~- 195 (583)
..+|++..|-.|+++|-.. .+...++. .....|+|++|-|.+ ..|++|+..| |.+|..... .
T Consensus 111 ~~fava~nddvVriy~kss-t~pt~Lks----------~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~r~ 178 (445)
T KOG2139|consen 111 IAFAVATNDDVVRIYDKSS-TCPTKLKS----------VSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRN 178 (445)
T ss_pred hhhhhhccCcEEEEeccCC-CCCceecc----------hhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccccc
Confidence 4577888899999999776 44444431 456889999999964 5777777754 999986521 1
Q ss_pred ---------eeEEEeccCCCeEEEEEecCCCCEEEEEcC-CCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEE
Q psy14906 196 ---------SLMEFIQTWGPVTALSFRTDGPPMMVSGSN-TGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265 (583)
Q Consensus 196 ---------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 265 (583)
.+....+| .+|+++.|.+||. .+++++. |..|.|||..++..+... .--.+.+.-+.||||+.+|+.
T Consensus 179 ~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt-~l~tAS~gsssi~iWdpdtg~~~pL~-~~glgg~slLkwSPdgd~lfa 255 (445)
T KOG2139|consen 179 IRMMSTHHLQVLQDPGH-NPVTSMQWNEDGT-ILVTASFGSSSIMIWDPDTGQKIPLI-PKGLGGFSLLKWSPDGDVLFA 255 (445)
T ss_pred cccccccchhheeCCCC-ceeeEEEEcCCCC-EEeecccCcceEEEEcCCCCCccccc-ccCCCceeeEEEcCCCCEEEE
Confidence 12223466 7999999999999 6777664 678999999998766655 334567889999999999999
Q ss_pred EeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEc
Q psy14906 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324 (583)
Q Consensus 266 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 324 (583)
+.-|+..++|+... .....+-.- ..+.|...+|+| +|.+|+..+. |.-++|.+
T Consensus 256 At~davfrlw~e~q---~wt~erw~l-gsgrvqtacWsp-cGsfLLf~~s-gsp~lysl 308 (445)
T KOG2139|consen 256 ATCDAVFRLWQENQ---SWTKERWIL-GSGRVQTACWSP-CGSFLLFACS-GSPRLYSL 308 (445)
T ss_pred ecccceeeeehhcc---cceecceec-cCCceeeeeecC-CCCEEEEEEc-CCceEEEE
Confidence 99999999995432 122222222 234899999998 6777665554 33445544
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.6e-15 Score=143.97 Aligned_cols=179 Identities=9% Similarity=0.072 Sum_probs=121.2
Q ss_pred CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC---CeEEEEEccCCceeEEEeccCCCe
Q psy14906 131 SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN---KKIILHNILTDESLMEFIQTWGPV 207 (583)
Q Consensus 131 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~v 207 (583)
..|.+||.+ |.....+. .+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++... +....+.+
T Consensus 176 ~~L~~~D~d-G~~~~~l~-----------~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~ 242 (427)
T PRK02889 176 YQLQISDAD-GQNAQSAL-----------SSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSN 242 (427)
T ss_pred cEEEEECCC-CCCceEec-----------cCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCc
Confidence 367777764 44444443 566788999999999999987643 469999999887643 33333567
Q ss_pred EEEEEecCCCCEEEEEcCCCcEEEEe--CCCCeehhhhhhccccceEEEEEecCCCEEEEEeC-CCeEEEEEccCCCCCc
Q psy14906 208 TALSFRTDGPPMMVSGSNTGHLTVWN--LEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNG 284 (583)
Q Consensus 208 ~~~~~~~~~~~~l~s~~~dg~i~vwd--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~ 284 (583)
.+.+|+|||+.++++.+.+|...+|. +..++ ...+ ..+........|+|||+.|+..+. ++...+|.++...+..
T Consensus 243 ~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~l-t~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~ 320 (427)
T PRK02889 243 SAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRL-TQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAA 320 (427)
T ss_pred cceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEEC-CCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCce
Confidence 78999999985556777888766665 44443 3344 344555667889999998876654 5678888776543332
Q ss_pred eeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC---cEEEEEccccc
Q psy14906 285 RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS---TLRIFNTKSET 328 (583)
Q Consensus 285 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~ 328 (583)
+.+. +. ........|+| +|++|+..+.++ .|.+||+.+++
T Consensus 321 ~~lt-~~--g~~~~~~~~Sp-DG~~Ia~~s~~~g~~~I~v~d~~~g~ 363 (427)
T PRK02889 321 QRVT-FT--GSYNTSPRISP-DGKLLAYISRVGGAFKLYVQDLATGQ 363 (427)
T ss_pred EEEe-cC--CCCcCceEECC-CCCEEEEEEccCCcEEEEEEECCCCC
Confidence 2222 22 22344678997 899988776554 58888887654
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.7e-11 Score=123.90 Aligned_cols=453 Identities=14% Similarity=0.122 Sum_probs=270.9
Q ss_pred ccEEEEEeCCCceEEEEeeCCe---EEEEecCCc---EEEeecC-----CCCCCeEEEEe--eC-eEEEEEcCCeEEEE-
Q psy14906 33 PVVARFIRRRKETLFVTCVGKA---FHVYGCNHF---KLLSVSP-----QHEDDITCLSS--DF-FHIYTSANNIIYAW- 97 (583)
Q Consensus 33 ~~~~~~~p~~~~~~i~~~~~~~---i~v~d~~~~---~~~~~~~-----~h~~~v~~~~~--~~-~~~~~~~~~~i~vw- 97 (583)
....+|.+..+..+++.+.... |.+...... +.+..+. ...+.|.++.+ +. .++++..+|.|.+.
T Consensus 24 ~~~~~~d~~sd~i~~~~~~~~~~~~i~~~~~~~~~~~~~l~s~~~~~~~~~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~ 103 (928)
T PF04762_consen 24 ITATAFDSDSDSIYFVLGPNEIDYVIELDRFSQDGSVEVLASWDAPLPDDPNDKIVSFQYLADSESLCIALASGDIILVR 103 (928)
T ss_pred cceEEEecCCCeEEEEECCCCcceEEEEEeeccCCceeEEEeccccCCcCCCCcEEEEEeccCCCcEEEEECCceEEEEE
Confidence 3445666666676666553322 333322221 2233332 24567888887 33 67888899999999
Q ss_pred ---eccceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEE-----ec---------
Q psy14906 98 ---RRGIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKI-----MG--------- 158 (583)
Q Consensus 98 ---~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-----~~--------- 158 (583)
+.+...+.....-+..|.++ |||+..|+.+..++++.+-+ .+-+.+.+..+....+.. .|
T Consensus 104 ~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt-~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~ 182 (928)
T PF04762_consen 104 EDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMT-RDFDPISEVPLDSDDFGESKHVSVGWGKKETQFH 182 (928)
T ss_pred ccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEe-ccceEEEEeecCccccCCCceeeeccCcccCccC
Confidence 65555555555667789987 99999999999999988876 444555444433322211 11
Q ss_pred ----cc-------------------CCcceEEEeeCCCCCEEEEEec------CCeEEEEEccCCceeEEEeccCCCeEE
Q psy14906 159 ----KR-------------------WNSCVNVLEPSPVVDIIGVGLS------NKKIILHNILTDESLMEFIQTWGPVTA 209 (583)
Q Consensus 159 ----~~-------------------~~~~i~~~~~s~~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~~~~~v~~ 209 (583)
+. ....-..++|-.||.++|+.+- ...++||+-+ |+....-..-.+--.+
T Consensus 183 Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~ 261 (928)
T PF04762_consen 183 GSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGA 261 (928)
T ss_pred cchhhhhhhhccCCCCCccccCccccCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCC
Confidence 00 3335567889999999998764 2579999965 6655444433344568
Q ss_pred EEEecCCCCEEEEEcC---CCcEEEEeCCCCeehhhhh---hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q psy14906 210 LSFRTDGPPMMVSGSN---TGHLTVWNLEDRQVENQIK---KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN 283 (583)
Q Consensus 210 ~~~~~~~~~~l~s~~~---dg~i~vwd~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~ 283 (583)
++|.|.|. ++|+... ...|.+|.-+ |-....+. ......|..+.|++|+..||..-.|. |.+|-. .+..
T Consensus 262 l~WrPsG~-lIA~~q~~~~~~~VvFfErN-GLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~--~NYH 336 (928)
T PF04762_consen 262 LSWRPSGN-LIASSQRLPDRHDVVFFERN-GLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTR--SNYH 336 (928)
T ss_pred ccCCCCCC-EEEEEEEcCCCcEEEEEecC-CcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEe--eCCE
Confidence 89999999 7777654 3457777754 32222221 23456899999999999999987665 999943 3333
Q ss_pred ceeeEEeccC-CCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccc
Q psy14906 284 GRLLRIREGH-SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVS 362 (583)
Q Consensus 284 ~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (583)
+.+.+.+... ...+..+.|+|.+...|...+.+|.+..++..-......
T Consensus 337 WYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~------------------------------ 386 (928)
T PF04762_consen 337 WYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSP------------------------------ 386 (928)
T ss_pred EEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecC------------------------------
Confidence 3333333322 334556999998888899888888887766532111000
Q ss_pred eeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcc
Q psy14906 363 QFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQ 442 (583)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~ 442 (583)
.... .+.-.+..-++..+.+-.+.....+..- ....-.-..++..++|++++..+++-..||.|.+|...
T Consensus 387 ------~~~~-~D~g~vaVIDG~~lllTpf~~a~VPPPM---s~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~ 456 (928)
T PF04762_consen 387 ------GSSP-NDNGTVAVIDGNKLLLTPFRRAVVPPPM---SSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWD 456 (928)
T ss_pred ------CCCc-cCceEEEEEeCCeEEEecccccCCCchH---hceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEec
Confidence 0000 0112223333444555544433221110 00111112789999999999889999999999999865
Q ss_pred cCccc--------cccCC-----CCCCCcccCeeEEEEeCCCcEEEEeecC---CcEEEEEccCCCC-CceEE-eeccCC
Q psy14906 443 SGAHR--------GSYGH-----DNQPGHVGGVRGVVSDNLNQIVISGGND---QTVKVWHFKQTGK-PPLRS-IKLDNG 504 (583)
Q Consensus 443 ~~~~~--------~~~~~-----~~~~~h~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~~~~~-~~~~~-~~~~~~ 504 (583)
..... ..+.. .........+..++|..+..+++....+ ..+.++++..... ..... ......
T Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 536 (928)
T PF04762_consen 457 LKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDIDDSENSASVESSTEVDGV 536 (928)
T ss_pred CCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEEEEEeccCCCceeEEEEeccCce
Confidence 43221 11110 0001234567889998888776666554 5788888854311 11222 223345
Q ss_pred eeeEEeccCCcEEEEEeCCceEEEEEcc
Q psy14906 505 ISFFRTHQESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 505 v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 532 (583)
+..+...++...++.-..+|.+...+..
T Consensus 537 ~~~~~~~~~~~~~~~q~~~G~v~~~~~~ 564 (928)
T PF04762_consen 537 VLIISSSPDSGSLYIQTNDGKVFQLSSD 564 (928)
T ss_pred EEEEeeCCCCcEEEEEECCCEEEEeecC
Confidence 5555555555556777778887766543
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.9e-15 Score=132.98 Aligned_cols=293 Identities=14% Similarity=0.117 Sum_probs=202.1
Q ss_pred cCCcceEEEeeCCCCCEE-EEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 160 RWNSCVNVLEPSPVVDII-GVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
.+...-+.|..+|||+++ |+|...-.|++||+........-......|.-.-.+.|-. -++--..|.+|.+-..-...
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~S-K~v~L~~DR~IefHak~G~h 127 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYS-KSVFLQNDRTIEFHAKYGRH 127 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchh-hheEeecCceeeehhhcCee
Confidence 667788899999999976 6777888999999976554433333334454444454433 34444556666553322111
Q ss_pred ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCc
Q psy14906 239 VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDST 318 (583)
Q Consensus 239 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 318 (583)
....+ ...-..++++.-..-|+.++....|.-++++ .++.+..+....+.++++..++ -..+|++|+.+|.
T Consensus 128 y~~RI----P~~GRDm~y~~~scDly~~gsg~evYRlNLE----qGrfL~P~~~~~~~lN~v~in~-~hgLla~Gt~~g~ 198 (703)
T KOG2321|consen 128 YRTRI----PKFGRDMKYHKPSCDLYLVGSGSEVYRLNLE----QGRFLNPFETDSGELNVVSINE-EHGLLACGTEDGV 198 (703)
T ss_pred eeeec----CcCCccccccCCCccEEEeecCcceEEEEcc----ccccccccccccccceeeeecC-ccceEEecccCce
Confidence 11111 1122345554333334455555555555544 6778888887888999999997 5778999999999
Q ss_pred EEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccc
Q psy14906 319 LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMD 398 (583)
Q Consensus 319 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 398 (583)
+.+||.+.......+.........
T Consensus 199 VEfwDpR~ksrv~~l~~~~~v~s~-------------------------------------------------------- 222 (703)
T KOG2321|consen 199 VEFWDPRDKSRVGTLDAASSVNSH-------------------------------------------------------- 222 (703)
T ss_pred EEEecchhhhhheeeecccccCCC--------------------------------------------------------
Confidence 999999987766554322110000
Q ss_pred ceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCC--CcEEEE
Q psy14906 399 DMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNL--NQIVIS 476 (583)
Q Consensus 399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s 476 (583)
........|+++.|+.+|-.+++|+.+|.+.|||+++.+++..-. .+..-+|..+.|.+. .+.+++
T Consensus 223 --------pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kd----h~~e~pi~~l~~~~~~~q~~v~S 290 (703)
T KOG2321|consen 223 --------PGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKD----HGYELPIKKLDWQDTDQQNKVVS 290 (703)
T ss_pred --------ccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecc----cCCccceeeecccccCCCceEEe
Confidence 000001469999999999999999999999999999888776532 344568889999775 455666
Q ss_pred eecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccc
Q psy14906 477 GGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533 (583)
Q Consensus 477 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 533 (583)
.. ...++|||-.++ +....++....+..+++-|++.+++++-+++.+..|=+..
T Consensus 291 ~D-k~~~kiWd~~~G--k~~asiEpt~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~ 344 (703)
T KOG2321|consen 291 MD-KRILKIWDECTG--KPMASIEPTSDLNDFCFVPGSGMFFTANESSKMHTYYIPS 344 (703)
T ss_pred cc-hHHhhhcccccC--CceeeccccCCcCceeeecCCceEEEecCCCcceeEEccc
Confidence 54 467999999999 8999998888999999999999999999998887776644
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=4.5e-15 Score=142.96 Aligned_cols=179 Identities=15% Similarity=0.138 Sum_probs=122.4
Q ss_pred CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC---CeEEEEEccCCceeEEEeccCCCe
Q psy14906 131 SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN---KKIILHNILTDESLMEFIQTWGPV 207 (583)
Q Consensus 131 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~v 207 (583)
..|.+||...+ ....+. .+...+.+.+|+|||+.|+..+.+ ..|.+||+.+++... +....+..
T Consensus 184 ~~l~i~D~~g~-~~~~lt-----------~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~ 250 (433)
T PRK04922 184 YALQVADSDGY-NPQTIL-----------RSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGIN 250 (433)
T ss_pred EEEEEECCCCC-CceEee-----------cCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCc
Confidence 36999998654 334444 566789999999999999987643 469999998776543 33333556
Q ss_pred EEEEEecCCCCEEEEEcCCC--cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEe-CCCeEEEEEccCCCCCc
Q psy14906 208 TALSFRTDGPPMMVSGSNTG--HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS-PDNTLKLWIFDKADGNG 284 (583)
Q Consensus 208 ~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~~~ 284 (583)
.+.+|+|||+.++++.+.+| .|.+||+.+++... + ..+.......+|+|||+.|+..+ .++...+|.++...+..
T Consensus 251 ~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~-l-t~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~ 328 (433)
T PRK04922 251 GAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTR-L-TNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSA 328 (433)
T ss_pred cCceECCCCCEEEEEEeCCCCceEEEEECCCCCeEE-C-ccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCe
Confidence 68899999995556666655 59999998876543 3 34555556789999999888766 35565666556543332
Q ss_pred eeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC---cEEEEEccccc
Q psy14906 285 RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS---TLRIFNTKSET 328 (583)
Q Consensus 285 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~ 328 (583)
+.+. . +.......+|+| +++.|+..+.++ .|.+||+.+++
T Consensus 329 ~~lt-~--~g~~~~~~~~Sp-DG~~Ia~~~~~~~~~~I~v~d~~~g~ 371 (433)
T PRK04922 329 ERLT-F--QGNYNARASVSP-DGKKIAMVHGSGGQYRIAVMDLSTGS 371 (433)
T ss_pred EEee-c--CCCCccCEEECC-CCCEEEEEECCCCceeEEEEECCCCC
Confidence 2222 2 223445789997 788888765433 58888876654
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.3e-14 Score=125.66 Aligned_cols=322 Identities=13% Similarity=0.125 Sum_probs=212.5
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCC------------
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTG------------ 227 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg------------ 227 (583)
...-++....|||.|.+|++....+ |.+|.-..+..+..+. | ..|..+.|+|.++ +|.+-+..+
T Consensus 30 ~~~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~~l~~~~-~-~~V~~~~fSP~~k-YL~tw~~~pi~~pe~e~sp~~ 105 (561)
T COG5354 30 SENWPVAYVSESPLGTYLFSEHAAG-VECWGGPSKAKLVRFR-H-PDVKYLDFSPNEK-YLVTWSREPIIEPEIEISPFT 105 (561)
T ss_pred ccCcchhheeecCcchheehhhccc-eEEccccchhheeeee-c-CCceecccCcccc-eeeeeccCCccChhhccCCcc
Confidence 3567889999999999999887764 8999987776555554 3 5899999999999 788865433
Q ss_pred ---cEEEEeCCCCeehhhhhhccccc--eE-EEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEE
Q psy14906 228 ---HLTVWNLEDRQVENQIKKAHRKV--VT-GAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ 301 (583)
Q Consensus 228 ---~i~vwd~~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~ 301 (583)
.+.+||..++..+..+ .+...+ .. -+.|+-+.+++|-. ....+.++++ .........+.++ ...+...+
T Consensus 106 ~~n~~~vwd~~sg~iv~sf-~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr--~~gi~dFs 180 (561)
T COG5354 106 SKNNVFVWDIASGMIVFSF-NGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNLR--PVGILDFS 180 (561)
T ss_pred ccCceeEEeccCceeEeec-cccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCccccCchhhcc--ccceeeEE
Confidence 4999999999999888 444444 33 67888888877655 3456899965 2221222222222 34577778
Q ss_pred EeeC-CCCEEEE-----eeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccc
Q psy14906 302 FYGN-SSDNILS-----AAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWN 375 (583)
Q Consensus 302 ~~~~-~~~~l~~-----~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (583)
++|. ++..|+. ...++.+++|.+..+..+..-
T Consensus 181 isP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk------------------------------------------ 218 (561)
T COG5354 181 ISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTK------------------------------------------ 218 (561)
T ss_pred ecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeee------------------------------------------
Confidence 8874 2222221 223444555544432221110
Q ss_pred cEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe-----------cCceEEEEEcccC
Q psy14906 376 NIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-----------SSGHVDRFNIQSG 444 (583)
Q Consensus 376 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-----------~dg~i~i~d~~~~ 444 (583)
.++. ..-..+.|.+.|+++++-. ....++++++...
T Consensus 219 ------------~lfk---------------------~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~ 265 (561)
T COG5354 219 ------------NLFK---------------------VSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITER 265 (561)
T ss_pred ------------eeEe---------------------ecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeeccc
Confidence 0000 1223456666776655421 2356888888743
Q ss_pred ccccccCCCCCCCcccCeeEEEEeCCCcEEEEee--cCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeC
Q psy14906 445 AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG--NDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLD 522 (583)
Q Consensus 445 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 522 (583)
..... ....++|...+|.|.++.+++.+ .+..+.++|++.+ +...-....-..+.|+|.+++++.++-
T Consensus 266 ~i~V~------~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N----l~~~~Pe~~rNT~~fsp~~r~il~agF 335 (561)
T COG5354 266 SIPVE------KDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN----LRFYFPEQKRNTIFFSPHERYILFAGF 335 (561)
T ss_pred cccee------ccccccceeeeecccCCceeEEecccccceeecccccc----eEEecCCcccccccccCcccEEEEecC
Confidence 33222 25578999999999988776554 6788999999864 333334456677899999999888665
Q ss_pred C---ceEEEEEccccceEE-eecccccceeeEEecCCCcEEEEEe------CCCeEEEEeCCCcc
Q psy14906 523 D---FTVNIIDIDTCTIIR-KLSGHMGQLTDADFSPDSRWLITAS------MDCTIRVWDIPSSQ 577 (583)
Q Consensus 523 d---g~i~i~d~~~~~~~~-~~~~h~~~v~~l~~s~d~~~l~s~~------~d~~i~vw~~~~~~ 577 (583)
| |.+.+||........ .+.+. .-.-+.|+||++++.+.. .|..++|||+...+
T Consensus 336 ~nl~gni~i~~~~~rf~~~~~~~~~--n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~ 398 (561)
T COG5354 336 DNLQGNIEIFDPAGRFKVAGAFNGL--NTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK 398 (561)
T ss_pred CccccceEEeccCCceEEEEEeecC--CceEeeccCCceEEEecCCCcccccCcceEEEEecCch
Confidence 4 789999988665443 55543 345568999999987653 47899999986443
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.2e-15 Score=127.52 Aligned_cols=239 Identities=11% Similarity=0.117 Sum_probs=180.4
Q ss_pred EEEEEeCCCceEEEEe-eCCeEEEEecCCcEEEee------cCCCCCCeEEEEe-eCeEEEEEcCCeEEEEecc-----c
Q psy14906 35 VARFIRRRKETLFVTC-VGKAFHVYGCNHFKLLSV------SPQHEDDITCLSS-DFFHIYTSANNIIYAWRRG-----I 101 (583)
Q Consensus 35 ~~~~~p~~~~~~i~~~-~~~~i~v~d~~~~~~~~~------~~~h~~~v~~~~~-~~~~~~~~~~~~i~vw~~~-----~ 101 (583)
.+.|--+++..++..+ .+..+...+.+....... ......+|..++. |+.++++-.+|.+.+|... .
T Consensus 60 ~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~dg~Litc~~sG~l~~~~~k~~d~hs 139 (412)
T KOG3881|consen 60 SLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLADGTLITCVSSGNLQVRHDKSGDLHS 139 (412)
T ss_pred hheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhcCCEEEEEecCCcEEEEeccCCcccc
Confidence 3444445555555555 566666666655444433 3345667777775 8899999999999999975 3
Q ss_pred eeeeeecccCccEEEE--ccCCC-EEEEEeCC--CcEEEEEcCCCcEEEEeeccC-CceEEecccCCcceEEEeeCCC--
Q psy14906 102 DIVGTYKGHTSPVHLI--LPFGP-HLISVDEE--SNVKVWDIKAEETYLELSFDN-DTFKIMGKRWNSCVNVLEPSPV-- 173 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i--s~~~~-~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~-- 173 (583)
..+..+..+ .++..+ ++... .+|+||.. ..++|||+++.+++.+-+-.+ +...+ .-.-.++.+.|-+.
T Consensus 140 s~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~L---rVPvW~tdi~Fl~g~~ 215 (412)
T KOG3881|consen 140 SKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGL---RVPVWITDIRFLEGSP 215 (412)
T ss_pred ccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccc---eeeeeeccceecCCCC
Confidence 333344433 344455 44444 55568888 889999999987766544221 11111 22346778889887
Q ss_pred CCEEEEEecCCeEEEEEccCC-ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceE
Q psy14906 174 VDIIGVGLSNKKIILHNILTD-ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVT 252 (583)
Q Consensus 174 ~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~ 252 (583)
...||+++.-+.+++||.+.+ +++..|.....+++++...|+++ ++++|..-|.+..||++.++.......+..+.|.
T Consensus 216 ~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn-~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsir 294 (412)
T KOG3881|consen 216 NYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGN-FIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIR 294 (412)
T ss_pred CceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCc-EEEEecccchhheecccCceeeccccCCccCCcc
Confidence 889999999999999999866 57788888889999999999999 8999999999999999999998884489999999
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEEcc
Q psy14906 253 GAHFLYNEPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 253 ~~~~~~~~~~l~s~~~d~~i~~w~~~ 278 (583)
++..+|.+++++++|-|+.+||+|++
T Consensus 295 sih~hp~~~~las~GLDRyvRIhD~k 320 (412)
T KOG3881|consen 295 SIHCHPTHPVLASCGLDRYVRIHDIK 320 (412)
T ss_pred eEEEcCCCceEEeeccceeEEEeecc
Confidence 99999999999999999999999775
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.7e-15 Score=124.92 Aligned_cols=156 Identities=17% Similarity=0.232 Sum_probs=116.0
Q ss_pred ceEEEEccCCcEEEEEec----------CceEEEEEcccC-ccccccCCCCCCCcccCeeEEEEeCCCcEEEEe--ecCC
Q psy14906 415 PTCVYITHCGNFVLIGYS----------SGHVDRFNIQSG-AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISG--GNDQ 481 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~----------dg~i~i~d~~~~-~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~--~~dg 481 (583)
-..+.|+|+|++|++-.. -|...+|.+... .....+. ....++|.+++|+|+++.++.. ..++
T Consensus 8 ~~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~----l~~~~~I~~~~WsP~g~~favi~g~~~~ 83 (194)
T PF08662_consen 8 DAKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIE----LKKEGPIHDVAWSPNGNEFAVIYGSMPA 83 (194)
T ss_pred eEEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceee----ccCCCceEEEEECcCCCEEEEEEccCCc
Confidence 346889999988776544 134556665332 2233331 2345579999999999987544 4677
Q ss_pred cEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeC---CceEEEEEccccceEEeecccccceeeEEecCCCcE
Q psy14906 482 TVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLD---DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558 (583)
Q Consensus 482 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~ 558 (583)
.|.+||++. +.+..+. ...+..+.|+|+|++|++++. .|.+.+||+++.+.+.... |. .++.++|+|||++
T Consensus 84 ~v~lyd~~~---~~i~~~~-~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~-~~-~~t~~~WsPdGr~ 157 (194)
T PF08662_consen 84 KVTLYDVKG---KKIFSFG-TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE-HS-DATDVEWSPDGRY 157 (194)
T ss_pred ccEEEcCcc---cEeEeec-CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc-cC-cEEEEEEcCCCCE
Confidence 999999973 5666654 457789999999999999874 4679999999999887766 33 4789999999999
Q ss_pred EEEEeC------CCeEEEEeCCCcccccc
Q psy14906 559 LITASM------DCTIRVWDIPSSQLIDC 581 (583)
Q Consensus 559 l~s~~~------d~~i~vw~~~~~~~~~~ 581 (583)
|+++.. |+.++||++. |+++..
T Consensus 158 ~~ta~t~~r~~~dng~~Iw~~~-G~~l~~ 185 (194)
T PF08662_consen 158 LATATTSPRLRVDNGFKIWSFQ-GRLLYK 185 (194)
T ss_pred EEEEEeccceeccccEEEEEec-CeEeEe
Confidence 998864 7889999985 777654
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=4.6e-15 Score=125.56 Aligned_cols=255 Identities=16% Similarity=0.214 Sum_probs=184.1
Q ss_pred CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC-CCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeE
Q psy14906 194 DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272 (583)
Q Consensus 194 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i 272 (583)
...+..+++|.+.++....-|..+ -+++.+.|.+++||-- +.++.-..+...-..+++++.+.++...|+.|-..|++
T Consensus 14 p~ll~~~eG~~d~vn~~~l~~~e~-gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtv 92 (404)
T KOG1409|consen 14 PELLSKIEGSQDDVNAAILIPKEE-GVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTV 92 (404)
T ss_pred hhhhhhhcCchhhhhhheeccCCC-CeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceE
Confidence 345566788988898888888776 6899999999999954 45666666644557789999999999999999999999
Q ss_pred EEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcc
Q psy14906 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKM 352 (583)
Q Consensus 273 ~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (583)
.-+.+...-......+....|...+..+.|+- ....+++.+.|..+.---.+.+.....+.
T Consensus 93 tefs~sedfnkm~~~r~~~~h~~~v~~~if~~-~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~------------------ 153 (404)
T KOG1409|consen 93 TEFALSEDFNKMTFLKDYLAHQARVSAIVFSL-THEWVLSTGKDKQFAWHCTESGNRLGGYN------------------ 153 (404)
T ss_pred EEEEhhhhhhhcchhhhhhhhhcceeeEEecC-CceeEEEeccccceEEEeeccCCcccceE------------------
Confidence 98866544334555666778999999999984 67899999988776544333332211110
Q ss_pred ccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec
Q psy14906 353 NEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS 432 (583)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 432 (583)
+. ...+++.+.-. +..+|..
T Consensus 154 ---------------------------------------~~-------------------~~~t~~~~d~~--~~fvGd~ 173 (404)
T KOG1409|consen 154 ---------------------------------------FE-------------------TPASALQFDAL--YAFVGDH 173 (404)
T ss_pred ---------------------------------------ee-------------------ccCCCCceeeE--EEEeccc
Confidence 00 00111111111 4555666
Q ss_pred CceEEEEEcccC--ccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEe
Q psy14906 433 SGHVDRFNIQSG--AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRT 510 (583)
Q Consensus 433 dg~i~i~d~~~~--~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 510 (583)
.|.|....+... ..+.++ .+|.+.+++++|.|....|.+|..|..+.+||+............+...|..+..
T Consensus 174 ~gqvt~lr~~~~~~~~i~~~-----~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~ 248 (404)
T KOG1409|consen 174 SGQITMLKLEQNGCQLITTF-----NGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSY 248 (404)
T ss_pred ccceEEEEEeecCCceEEEE-----cCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhh
Confidence 666665554432 333444 7999999999999999999999999999999998763334445556678888888
Q ss_pred ccCCcEEEEEeCCceEEEEEccc
Q psy14906 511 HQESSMLAVCLDDFTVNIIDIDT 533 (583)
Q Consensus 511 s~~~~~l~~~~~dg~i~i~d~~~ 533 (583)
-+--+.+.+++.||.|.+|+.+.
T Consensus 249 ~~~t~~l~S~~edg~i~~w~mn~ 271 (404)
T KOG1409|consen 249 AQHTRQLISCGEDGGIVVWNMNV 271 (404)
T ss_pred hhhheeeeeccCCCeEEEEeccc
Confidence 88888999999999999999753
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-13 Score=122.98 Aligned_cols=356 Identities=13% Similarity=0.136 Sum_probs=221.9
Q ss_pred ecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC-
Q psy14906 107 YKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN- 183 (583)
Q Consensus 107 ~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d- 183 (583)
+....-++... ||.|.+|++... ..|.+|.-.....+.++. ...|..+.|+|.+++|.+-+..
T Consensus 28 ~~~~~~p~~~~~~SP~G~~l~~~~~-~~V~~~~g~~~~~l~~~~-------------~~~V~~~~fSP~~kYL~tw~~~p 93 (561)
T COG5354 28 FESENWPVAYVSESPLGTYLFSEHA-AGVECWGGPSKAKLVRFR-------------HPDVKYLDFSPNEKYLVTWSREP 93 (561)
T ss_pred ccccCcchhheeecCcchheehhhc-cceEEccccchhheeeee-------------cCCceecccCcccceeeeeccCC
Confidence 33344455544 999999999764 459999988877666654 4578899999999999986533
Q ss_pred --------------CeEEEEEccCCceeEEEeccCCC--eE-EEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhc
Q psy14906 184 --------------KKIILHNILTDESLMEFIQTWGP--VT-ALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA 246 (583)
Q Consensus 184 --------------~~i~iw~~~~~~~~~~~~~~~~~--v~-~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 246 (583)
..+.+||..+|..+..+.....+ .+ -+.|+-++. ++|-- ....+.|+++...-....+..-
T Consensus 94 i~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~-y~ARv-v~~sl~i~e~t~n~~~~p~~~l 171 (561)
T COG5354 94 IIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDK-YVARV-VGSSLYIHEITDNIEEHPFKNL 171 (561)
T ss_pred ccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecch-hhhhh-ccCeEEEEecCCccccCchhhc
Confidence 35999999999999999876555 55 778999887 34333 2346999997322112222111
Q ss_pred cccceEEEEEecCCC--EEEE-----EeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 247 HRKVVTGAHFLYNEP--LLVT-----SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 247 ~~~~v~~~~~~~~~~--~l~s-----~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
....|....|+|.++ .|+. .+.++++++|.+.. +.....+.+. ...=..+.|.+ .|++|+.--.-
T Consensus 172 r~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~--~s~l~tk~lf--k~~~~qLkW~~-~g~~ll~l~~t--- 243 (561)
T COG5354 172 RPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPK--NSVLVTKNLF--KVSGVQLKWQV-LGKYLLVLVMT--- 243 (561)
T ss_pred cccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccC--CCeeeeeeeE--eecccEEEEec-CCceEEEEEEE---
Confidence 246788899998753 3443 45678899996642 1222222222 22224567775 56555432110
Q ss_pred EEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 320 RIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 320 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
+..+++ . ..+...+.++++.......
T Consensus 244 ---~~ksnK---s------------------------------------------------yfgesnLyl~~~~e~~i~V 269 (561)
T COG5354 244 ---HTKSNK---S------------------------------------------------YFGESNLYLLRITERSIPV 269 (561)
T ss_pred ---eeeccc---c------------------------------------------------eeccceEEEEeecccccce
Confidence 000000 0 0011223333333221111
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEE--EecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEe
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLI--GYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISG 477 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 477 (583)
.. ...++|..++|.|.++.+++ |...-.+.++|+... .... .....=..+.|+|.+++++.+
T Consensus 270 ~~--------~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~-------~Pe~~rNT~~fsp~~r~il~a 333 (561)
T COG5354 270 EK--------DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFY-------FPEQKRNTIFFSPHERYILFA 333 (561)
T ss_pred ec--------cccccceeeeecccCCceeEEecccccceeecccccc-eEEe-------cCCcccccccccCcccEEEEe
Confidence 00 11268999999999876655 457888999998866 3332 334455678899999999987
Q ss_pred ecC---CcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeC------CceEEEEEccccceEEeeccccccee
Q psy14906 478 GND---QTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLD------DFTVNIIDIDTCTIIRKLSGHMGQLT 548 (583)
Q Consensus 478 ~~d---g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~h~~~v~ 548 (583)
+-| |.+-+||.... -.....-......-+.|+||++++.+... |..|.|||+...... ..+
T Consensus 334 gF~nl~gni~i~~~~~r--f~~~~~~~~~n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~~f--------el~ 403 (561)
T COG5354 334 GFDNLQGNIEIFDPAGR--FKVAGAFNGLNTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAKVF--------ELT 403 (561)
T ss_pred cCCccccceEEeccCCc--eEEEEEeecCCceEeeccCCceEEEecCCCcccccCcceEEEEecCchhh--------hhh
Confidence 754 67999998875 33321222234566789999998887643 778999998744322 456
Q ss_pred eEEecCCCcEEEEEeCCC
Q psy14906 549 DADFSPDSRWLITASMDC 566 (583)
Q Consensus 549 ~l~~s~d~~~l~s~~~d~ 566 (583)
.+.|.|.+++.-+.+.+.
T Consensus 404 ~~~W~p~~~~~ttsSs~~ 421 (561)
T COG5354 404 NITWDPSGQYVTTSSSCP 421 (561)
T ss_pred hccccCCcccceeeccCC
Confidence 677777777666555443
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.1e-14 Score=136.65 Aligned_cols=235 Identities=9% Similarity=0.062 Sum_probs=151.4
Q ss_pred CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEc-CC--CcEEEEeCCCCeehhhhhhccccceEEEEEecCC
Q psy14906 184 KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS-NT--GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNE 260 (583)
Q Consensus 184 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~d--g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~ 260 (583)
..|.++|.. +.....+..+...+.+.+|+|||+ .|+..+ .+ ..|.+||+.+++... + ....+.+...+|+|||
T Consensus 176 ~~L~~~D~d-G~~~~~l~~~~~~v~~p~wSPDG~-~la~~s~~~~~~~I~~~dl~~g~~~~-l-~~~~g~~~~~~~SPDG 251 (427)
T PRK02889 176 YQLQISDAD-GQNAQSALSSPEPIISPAWSPDGT-KLAYVSFESKKPVVYVHDLATGRRRV-V-ANFKGSNSAPAWSPDG 251 (427)
T ss_pred cEEEEECCC-CCCceEeccCCCCcccceEcCCCC-EEEEEEccCCCcEEEEEECCCCCEEE-e-ecCCCCccceEECCCC
Confidence 467788874 555555666668899999999998 555444 22 359999999886533 2 2234556688999999
Q ss_pred CEEE-EEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC-CCcEEEEEcc--ccccceeeccc
Q psy14906 261 PLLV-TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFNTK--SETSNKNLGIA 336 (583)
Q Consensus 261 ~~l~-s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~--~~~~~~~~~~~ 336 (583)
+.|+ +.+.++...+|.++...+. ...+..+........|+| ||+.|+..+. +|...+|.+. ++.. +.+.
T Consensus 252 ~~la~~~~~~g~~~Iy~~d~~~~~---~~~lt~~~~~~~~~~wSp-DG~~l~f~s~~~g~~~Iy~~~~~~g~~-~~lt-- 324 (427)
T PRK02889 252 RTLAVALSRDGNSQIYTVNADGSG---LRRLTQSSGIDTEPFFSP-DGRSIYFTSDRGGAPQIYRMPASGGAA-QRVT-- 324 (427)
T ss_pred CEEEEEEccCCCceEEEEECCCCC---cEECCCCCCCCcCeEEcC-CCCEEEEEecCCCCcEEEEEECCCCce-EEEe--
Confidence 9876 5677888889987764332 344444555567788998 7888776554 4566666543 2211 0000
Q ss_pred hhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCce
Q psy14906 337 SANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT 416 (583)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 416 (583)
+ . .....
T Consensus 325 -----------------------------------------------------~-----------------~---g~~~~ 331 (427)
T PRK02889 325 -----------------------------------------------------F-----------------T---GSYNT 331 (427)
T ss_pred -----------------------------------------------------c-----------------C---CCCcC
Confidence 0 0 01233
Q ss_pred EEEEccCCcEEEEEecCc---eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCC-c--EEEEEccC
Q psy14906 417 CVYITHCGNFVLIGYSSG---HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ-T--VKVWHFKQ 490 (583)
Q Consensus 417 ~~~~s~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-~--i~iwd~~~ 490 (583)
...|+|||++++..+.++ .|++||+.+++..... .. .......|+||++.|+..+.++ . +.+.++..
T Consensus 332 ~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~lt-----~~--~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~g 404 (427)
T PRK02889 332 SPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTALT-----DT--TRDESPSFAPNGRYILYATQQGGRSVLAAVSSDG 404 (427)
T ss_pred ceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEEcc-----CC--CCccCceECCCCCEEEEEEecCCCEEEEEEECCC
Confidence 568999999998877654 6999999887654322 11 2346789999999888777544 2 44445532
Q ss_pred CCCCceEEee-ccCCeeeEEecc
Q psy14906 491 TGKPPLRSIK-LDNGISFFRTHQ 512 (583)
Q Consensus 491 ~~~~~~~~~~-~~~~v~~~~~s~ 512 (583)
.....+. ..+.+...+|+|
T Consensus 405 ---~~~~~l~~~~g~~~~p~wsp 424 (427)
T PRK02889 405 ---RIKQRLSVQGGDVREPSWGP 424 (427)
T ss_pred ---CceEEeecCCCCCCCCccCC
Confidence 3444443 335667777776
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=8.5e-15 Score=123.97 Aligned_cols=334 Identities=11% Similarity=0.174 Sum_probs=208.6
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc-----eeEEEeccC------------CCeEEEEEecCCCC-EEE
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE-----SLMEFIQTW------------GPVTALSFRTDGPP-MMV 221 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~------------~~v~~~~~~~~~~~-~l~ 221 (583)
....-|.++.|...|.+||+|..+|.|.++.-.... ....++.|. ..|..+.|.+++.. .++
T Consensus 23 teadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FL 102 (433)
T KOG1354|consen 23 TEADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFL 102 (433)
T ss_pred chhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEE
Confidence 335678999999999999999999999998754221 222333332 46889999987653 566
Q ss_pred EEcCCCcEEEEeCCCCe-----------------------------------ehhhhhhccccceEEEEEecCCCEEEEE
Q psy14906 222 SGSNTGHLTVWNLEDRQ-----------------------------------VENQIKKAHRKVVTGAHFLYNEPLLVTS 266 (583)
Q Consensus 222 s~~~dg~i~vwd~~~~~-----------------------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 266 (583)
..+.|.+|++|.+.... +.+.+..+|+..|+++.++.|+..++++
T Consensus 103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA 182 (433)
T KOG1354|consen 103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA 182 (433)
T ss_pred EecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec
Confidence 67789999999875321 1222336788899999999999999887
Q ss_pred eCCCeEEEEEccCCCCCceeeEEec----cCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhh
Q psy14906 267 SPDNTLKLWIFDKADGNGRLLRIRE----GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNN 342 (583)
Q Consensus 267 ~~d~~i~~w~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 342 (583)
. |=.|.+|+++..+.....+..-. .-..-|++..|+|...+.++-.+..|+|++.|++...+...-.
T Consensus 183 D-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hs-------- 253 (433)
T KOG1354|consen 183 D-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHS-------- 253 (433)
T ss_pred c-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchh--------
Confidence 5 77899998877655444433221 2234688899999777888889999999999998543211100
Q ss_pred hhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc
Q psy14906 343 LKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH 422 (583)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 422 (583)
+++....... ...+...--..|..+.|++
T Consensus 254 ---------------------------------------------KlfEepedp~------~rsffseiIsSISDvKFs~ 282 (433)
T KOG1354|consen 254 ---------------------------------------------KLFEEPEDPS------SRSFFSEIISSISDVKFSH 282 (433)
T ss_pred ---------------------------------------------hhhccccCCc------chhhHHHHhhhhhceEEcc
Confidence 0000000000 0000000015688999999
Q ss_pred CCcEEEEEecCceEEEEEcc-cCccccccCCCCCCCcc------------cC---eeEEEEeCCCcEEEEeecCCcEEEE
Q psy14906 423 CGNFVLIGYSSGHVDRFNIQ-SGAHRGSYGHDNQPGHV------------GG---VRGVVSDNLNQIVISGGNDQTVKVW 486 (583)
Q Consensus 423 ~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~h~------------~~---v~~~~~s~~~~~l~s~~~dg~i~iw 486 (583)
+|+++++-.. -+|++||+. ..+++.++ +-|. .. -..++|+.++.+++||+....++++
T Consensus 283 sGryilsRDy-ltvk~wD~nme~~pv~t~-----~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf 356 (433)
T KOG1354|consen 283 SGRYILSRDY-LTVKLWDLNMEAKPVETY-----PVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVF 356 (433)
T ss_pred CCcEEEEecc-ceeEEEeccccCCcceEE-----eehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEe
Confidence 9999998654 469999994 44444444 2221 11 2357889899999999999999999
Q ss_pred EccCCCCCceEEeeccCC--eeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeC
Q psy14906 487 HFKQTGKPPLRSIKLDNG--ISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564 (583)
Q Consensus 487 d~~~~~~~~~~~~~~~~~--v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~ 564 (583)
++..+..+....-..... ...+ ..-+.+.+++......++ ...+. ....|...+|+|..+.+|.+..
T Consensus 357 ~~~~gsk~d~tl~asr~~~~~~~~---~k~~~V~~~g~r~~~~~~-------vd~ld-f~kkilh~aWhp~en~ia~aat 425 (433)
T KOG1354|consen 357 NLARGSKEDFTLEASRKNMKPRKV---LKLRLVSSSGKRKRDEIS-------VDALD-FRKKILHTAWHPKENSIAVAAT 425 (433)
T ss_pred cCCCCcceeecccccccCCccccc---ccceeeecCCCccccccc-------cchhh-hhhHHHhhccCCccceeeeeec
Confidence 987763222111111111 1111 111233333333221111 01111 2345777899999999988865
Q ss_pred CCeEEEE
Q psy14906 565 DCTIRVW 571 (583)
Q Consensus 565 d~~i~vw 571 (583)
++ ++++
T Consensus 426 nn-lyif 431 (433)
T KOG1354|consen 426 NN-LYIF 431 (433)
T ss_pred Cc-eEEe
Confidence 54 5655
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.7e-14 Score=137.88 Aligned_cols=176 Identities=15% Similarity=0.104 Sum_probs=120.6
Q ss_pred cEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec---CCeEEEEEccCCceeEEEeccCCCeE
Q psy14906 132 NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS---NKKIILHNILTDESLMEFIQTWGPVT 208 (583)
Q Consensus 132 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~v~ 208 (583)
.|.+||.+.. ....+. .+...+.+.+|+|||+.|+..+. +..|.+||+.+++.. .+..+.+.+.
T Consensus 183 ~l~~~d~dg~-~~~~lt-----------~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~ 249 (435)
T PRK05137 183 RLAIMDQDGA-NVRYLT-----------DGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTF 249 (435)
T ss_pred EEEEECCCCC-CcEEEe-----------cCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCccc
Confidence 7889998654 344454 66788999999999999988764 468999999887654 4455556788
Q ss_pred EEEEecCCCCEEEEEcCCCc--EEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC-CCeEEEEEccCCCCCce
Q psy14906 209 ALSFRTDGPPMMVSGSNTGH--LTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNGR 285 (583)
Q Consensus 209 ~~~~~~~~~~~l~s~~~dg~--i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~~ 285 (583)
..+|+|||+.++++.+.++. |.+||+.+++... + ..+........|+|||+.|+..+. ++...+|.++...+..+
T Consensus 250 ~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~-L-t~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~ 327 (435)
T PRK05137 250 APRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTR-L-TDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPR 327 (435)
T ss_pred CcEECCCCCEEEEEEecCCCceEEEEECCCCceEE-c-cCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeE
Confidence 99999999855567666665 7777988776543 4 345556677899999998887763 44444444444332222
Q ss_pred eeEEeccCCCCCeeEEEeeCCCCEEEEeeCC---CcEEEEEccc
Q psy14906 286 LLRIREGHSAPPNYIQFYGNSSDNILSAAGD---STLRIFNTKS 326 (583)
Q Consensus 286 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~ 326 (583)
.+..+...+....|+| +++.|+....+ ..|.+||+.+
T Consensus 328 ---~lt~~~~~~~~~~~Sp-dG~~ia~~~~~~~~~~i~~~d~~~ 367 (435)
T PRK05137 328 ---RISFGGGRYSTPVWSP-RGDLIAFTKQGGGQFSIGVMKPDG 367 (435)
T ss_pred ---EeecCCCcccCeEECC-CCCEEEEEEcCCCceEEEEEECCC
Confidence 2322344566788998 78888776543 2466666543
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.3e-14 Score=125.16 Aligned_cols=260 Identities=13% Similarity=0.191 Sum_probs=183.0
Q ss_pred CCCeEEEEEecCCCCEEEEEc-CCCcEEEEeCCCCeehhhh-----hhccccceEEEEEecCCCEEEEEeCCCeEEEEEc
Q psy14906 204 WGPVTALSFRTDGPPMMVSGS-NTGHLTVWNLEDRQVENQI-----KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIF 277 (583)
Q Consensus 204 ~~~v~~~~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~-----~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~ 277 (583)
...+..++|..+++.-++.+. .+..+..+.+....+...+ .....++|..++.. |+ .|++|-.+|.+.+|..
T Consensus 55 ~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~-dg-~Litc~~sG~l~~~~~ 132 (412)
T KOG3881|consen 55 LDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA-DG-TLITCVSSGNLQVRHD 132 (412)
T ss_pred hhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc-CC-EEEEEecCCcEEEEec
Confidence 367888888877664444444 6777777777766554442 12345567666653 33 5777788999999966
Q ss_pred cCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC--CcEEEEEccccccceeeccchhhhhhhhhhcchhccccc
Q psy14906 278 DKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD--STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEK 355 (583)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (583)
.........+..+..+ .++..+.-++.....+++|+.. ..+.+||++..+.
T Consensus 133 k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~q-------------------------- 185 (412)
T KOG3881|consen 133 KSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQ-------------------------- 185 (412)
T ss_pred cCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeeccccee--------------------------
Confidence 4332222333333333 3455666665555677778887 7788888876421
Q ss_pred cCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCce
Q psy14906 356 FILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGH 435 (583)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 435 (583)
+|...+- |+.. -+=.
T Consensus 186 ---------------------------------iw~aKNv--------------------------pnD~------L~Lr 200 (412)
T KOG3881|consen 186 ---------------------------------IWSAKNV--------------------------PNDR------LGLR 200 (412)
T ss_pred ---------------------------------eeeccCC--------------------------CCcc------ccce
Confidence 1211110 0000 0112
Q ss_pred EEEEEcccCccccccCCCCCCCcccCeeEEEEeCC--CcEEEEeecCCcEEEEEccCCCCCceEEeecc-CCeeeEEecc
Q psy14906 436 VDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNL--NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQ 512 (583)
Q Consensus 436 i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~s~ 512 (583)
|-+| ++++.|-+. ...||++..-+.+++||.+.+. +++..+... .+++++...|
T Consensus 201 VPvW----------------------~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qR-RPV~~fd~~E~~is~~~l~p 257 (412)
T KOG3881|consen 201 VPVW----------------------ITDIRFLEGSPNYKFATITRYHQVRLYDTRHQR-RPVAQFDFLENPISSTGLTP 257 (412)
T ss_pred eeee----------------------eccceecCCCCCceEEEEecceeEEEecCcccC-cceeEeccccCcceeeeecC
Confidence 3344 445666665 6789999999999999999653 666666654 6899999999
Q ss_pred CCcEEEEEeCCceEEEEEccccceEEe-ecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccccc
Q psy14906 513 ESSMLAVCLDDFTVNIIDIDTCTIIRK-LSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLID 580 (583)
Q Consensus 513 ~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~ 580 (583)
+|+++++|..-+.+..||++.++.+.. +++-.+.|++|..+|..++||++|-|..|+|+|+++.+++.
T Consensus 258 ~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~ 326 (412)
T KOG3881|consen 258 SGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLH 326 (412)
T ss_pred CCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeecccchhhh
Confidence 999999999999999999999998876 88999999999999999999999999999999999977664
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.68 E-value=9e-13 Score=118.75 Aligned_cols=289 Identities=8% Similarity=-0.039 Sum_probs=181.9
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec----------CC
Q psy14906 120 FGPHLISVDEE-----SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS----------NK 184 (583)
Q Consensus 120 ~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----------d~ 184 (583)
++++++..... ++|.+.|.++++.+.++.. + ..+- .+ +|||++.|.++.. +.
T Consensus 11 ~~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~----------G-~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d 77 (352)
T TIGR02658 11 DARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDG----------G-FLPN-PV-VASDGSFFAHASTVYSRIARGKRTD 77 (352)
T ss_pred CCCEEEEECCcccccCceEEEEECCCCEEEEEEEc----------c-CCCc-ee-ECCCCCEEEEEeccccccccCCCCC
Confidence 44455444332 8999999999999998873 2 2222 24 9999998887765 67
Q ss_pred eEEEEEccCCceeEEEeccCC-------CeEEEEEecCCCCEEEEEc-C-CCcEEEEeCCCCeehhhhhhccccceEEEE
Q psy14906 185 KIILHNILTDESLMEFIQTWG-------PVTALSFRTDGPPMMVSGS-N-TGHLTVWNLEDRQVENQIKKAHRKVVTGAH 255 (583)
Q Consensus 185 ~i~iw~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~l~s~~-~-dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 255 (583)
.|.+||..+++.+.++..... ....++++|||+ +|+... . +..|.+.|+.+++.+.++.. .+...-..
T Consensus 78 ~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk-~l~V~n~~p~~~V~VvD~~~~kvv~ei~v--p~~~~vy~ 154 (352)
T TIGR02658 78 YVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNK-TLLFYQFSPSPAVGVVDLEGKAFVRMMDV--PDCYHIFP 154 (352)
T ss_pred EEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCC-EEEEecCCCCCEEEEEECCCCcEEEEEeC--CCCcEEEE
Confidence 999999999999998875322 234789999999 555544 4 78999999999999888832 22222222
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCCCCCceeeEE---eccCCCCCe-eEEEeeCCCCEEEEeeCCCcEEEEEccccccce
Q psy14906 256 FLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI---REGHSAPPN-YIQFYGNSSDNILSAAGDSTLRIFNTKSETSNK 331 (583)
Q Consensus 256 ~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~---~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 331 (583)
.+++..+ .-+.||......++.... ..... +.....++. .-.|.+.++.+++.... |+|.+.|+.......
T Consensus 155 t~e~~~~--~~~~Dg~~~~v~~d~~g~--~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~ 229 (352)
T TIGR02658 155 TANDTFF--MHCRDGSLAKVGYGTKGN--PKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKF 229 (352)
T ss_pred ecCCccE--EEeecCceEEEEecCCCc--eEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCccee
Confidence 3333322 223455555544433211 11111 111001100 01445547777776666 999999976543211
Q ss_pred eeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccC
Q psy14906 332 NLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAK 411 (583)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 411 (583)
.. .|..-....... .-.
T Consensus 230 ~~-------------------------------------------------------~~~~~~~~~~~~--------~wr 246 (352)
T TIGR02658 230 LP-------------------------------------------------------AIEAFTEAEKAD--------GWR 246 (352)
T ss_pred cc-------------------------------------------------------eeeecccccccc--------ccC
Confidence 10 111100000000 000
Q ss_pred CCCceEEEEccCCcEEEEEe----------cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc-EEEEee-c
Q psy14906 412 QSKPTCVYITHCGNFVLIGY----------SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ-IVISGG-N 479 (583)
Q Consensus 412 ~~~i~~~~~s~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~-~ 479 (583)
.....-++++|+++.+++.. ..+.|.++|..+++.+..+. -...+..++++||++ +|++.. .
T Consensus 247 P~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~------vG~~~~~iavS~Dgkp~lyvtn~~ 320 (352)
T TIGR02658 247 PGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIE------LGHEIDSINVSQDAKPLLYALSTG 320 (352)
T ss_pred CCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEe------CCCceeeEEECCCCCeEEEEeCCC
Confidence 13344599999999888843 22579999999999998873 345799999999999 777555 6
Q ss_pred CCcEEEEEccCCCCCceEEee
Q psy14906 480 DQTVKVWHFKQTGKPPLRSIK 500 (583)
Q Consensus 480 dg~i~iwd~~~~~~~~~~~~~ 500 (583)
++.|.+.|..+. +.+..+.
T Consensus 321 s~~VsViD~~t~--k~i~~i~ 339 (352)
T TIGR02658 321 DKTLYIFDAETG--KELSSVN 339 (352)
T ss_pred CCcEEEEECcCC--eEEeeec
Confidence 788999999998 7777773
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.8e-13 Score=122.28 Aligned_cols=327 Identities=11% Similarity=0.135 Sum_probs=205.0
Q ss_pred ceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcC-----------CCcEEEE
Q psy14906 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSN-----------TGHLTVW 232 (583)
Q Consensus 164 ~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-----------dg~i~vw 232 (583)
.=+-+.|||.|.+|++-...| |.+|--.+...+++|. | ..|.-+.|||..+ +|++-+. ...++||
T Consensus 212 Tetyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-H-p~Vq~idfSP~Ek-YLVT~s~~p~~~~~~d~e~~~l~IW 287 (698)
T KOG2314|consen 212 TETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-H-PGVQFIDFSPNEK-YLVTYSPEPIIVEEDDNEGQQLIIW 287 (698)
T ss_pred eeeeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-C-CCceeeecCCccc-eEEEecCCccccCcccCCCceEEEE
Confidence 345689999999999988776 8999766666666665 4 4789999999999 7887543 2469999
Q ss_pred eCCCCeehhhhhh--ccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEE
Q psy14906 233 NLEDRQVENQIKK--AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNI 310 (583)
Q Consensus 233 d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 310 (583)
|+.+|.+.+.+.. .....-.-+.||.|++++|--.. .+|.|+ +.+ ...++..-.-.-..|....|+| .++.|
T Consensus 288 DI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIy--Etp--sf~lld~Kslki~gIr~FswsP-~~~ll 361 (698)
T KOG2314|consen 288 DIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIY--ETP--SFMLLDKKSLKISGIRDFSWSP-TSNLL 361 (698)
T ss_pred EccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEE--ecC--ceeeecccccCCccccCcccCC-CcceE
Confidence 9999999888832 11122334789999999998776 568999 433 2223222222345788889998 44444
Q ss_pred EEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceE---
Q psy14906 311 LSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKV--- 387 (583)
Q Consensus 311 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--- 387 (583)
+ .|-.++......+..... .....+
T Consensus 362 A---------Ywtpe~~~~parvtL~ev-------------------------------------------Ps~~~iRt~ 389 (698)
T KOG2314|consen 362 A---------YWTPETNNIPARVTLMEV-------------------------------------------PSKREIRTK 389 (698)
T ss_pred E---------EEcccccCCcceEEEEec-------------------------------------------Cccceeeec
Confidence 3 454444332222111000 000011
Q ss_pred EEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe----------cCceEEEEEcccCccccccCCCCCCC
Q psy14906 388 SLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY----------SSGHVDRFNIQSGAHRGSYGHDNQPG 457 (583)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~~ 457 (583)
.++++. =..+.|-.+|.+|++-. .=..+.|+.+......... ..
T Consensus 390 nlfnVs---------------------DckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~-----ve 443 (698)
T KOG2314|consen 390 NLFNVS---------------------DCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEV-----VE 443 (698)
T ss_pred cceeee---------------------ccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCcee-----ee
Confidence 111111 11234445556655422 1123667776655443332 34
Q ss_pred cccCeeEEEEeCCCcEEEEeec---CCcEEEEEccCCCCC--ceEEeeccCCeeeEEeccCCcEEEEE---eCCceEEEE
Q psy14906 458 HVGGVRGVVSDNLNQIVISGGN---DQTVKVWHFKQTGKP--PLRSIKLDNGISFFRTHQESSMLAVC---LDDFTVNII 529 (583)
Q Consensus 458 h~~~v~~~~~s~~~~~l~s~~~---dg~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~---~~dg~i~i~ 529 (583)
-...|...+|-|.|+.+++.+. ..++.+|.+++...+ ++..+.. ...+.+.|+|.|++++++ +..|.+.++
T Consensus 444 lke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk-~~~N~vfwsPkG~fvvva~l~s~~g~l~F~ 522 (698)
T KOG2314|consen 444 LKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK-KFANTVFWSPKGRFVVVAALVSRRGDLEFY 522 (698)
T ss_pred cchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc-cccceEEEcCCCcEEEEEEecccccceEEE
Confidence 5678999999999987776553 346889988743212 2233332 467889999999988875 457899999
Q ss_pred EccccceEEeecccccceeeEEecCCCcEEEEEeC------CCeEEEEeCCCccccc
Q psy14906 530 DIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM------DCTIRVWDIPSSQLID 580 (583)
Q Consensus 530 d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~------d~~i~vw~~~~~~~~~ 580 (583)
|+.-......-.......+.+.|.|.|+|++|++. |.--++|+++ |++++
T Consensus 523 D~~~a~~k~~~~~eh~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfq-Grll~ 578 (698)
T KOG2314|consen 523 DTDYADLKDTASPEHFAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQ-GRLLK 578 (698)
T ss_pred ecchhhhhhccCccccccccceECCCCCEEEEeeehhhhccccceEEEEee-cHHHH
Confidence 98843322222112234688999999999999874 4556788876 55543
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.7e-14 Score=137.66 Aligned_cols=234 Identities=10% Similarity=0.044 Sum_probs=152.6
Q ss_pred CcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC---CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEe
Q psy14906 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD---NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY 303 (583)
Q Consensus 227 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 303 (583)
..|.+||.... ..+.+ ..+...+.+.+|+|||+.|+..+.+ ..|.+|+++ .+....+. .+........|+
T Consensus 184 ~~l~i~D~~g~-~~~~l-t~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~--~g~~~~l~---~~~g~~~~~~~S 256 (433)
T PRK04922 184 YALQVADSDGY-NPQTI-LRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLA--TGQRELVA---SFRGINGAPSFS 256 (433)
T ss_pred EEEEEECCCCC-CceEe-ecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECC--CCCEEEec---cCCCCccCceEC
Confidence 36889998643 33444 4567789999999999999887643 468888664 22333332 233445578999
Q ss_pred eCCCCEEE-EeeCCC--cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEE
Q psy14906 304 GNSSDNIL-SAAGDS--TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAI 380 (583)
Q Consensus 304 ~~~~~~l~-~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (583)
| |++.|+ +.+.+| .|++||+.+++..+...
T Consensus 257 p-DG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt~---------------------------------------------- 289 (433)
T PRK04922 257 P-DGRRLALTLSRDGNPEIYVMDLGSRQLTRLTN---------------------------------------------- 289 (433)
T ss_pred C-CCCEEEEEEeCCCCceEEEEECCCCCeEECcc----------------------------------------------
Confidence 8 787665 445555 58888887654321100
Q ss_pred ecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec-Cce--EEEEEcccCccccccCCCCCCC
Q psy14906 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS-SGH--VDRFNIQSGAHRGSYGHDNQPG 457 (583)
Q Consensus 381 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~--i~i~d~~~~~~~~~~~~~~~~~ 457 (583)
+.......+|+|||+.++..+. +|. |+++++.+++..... .
T Consensus 290 ------------------------------~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt------~ 333 (433)
T PRK04922 290 ------------------------------HFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLT------F 333 (433)
T ss_pred ------------------------------CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEee------c
Confidence 0022456789999998887764 444 677777666543221 2
Q ss_pred cccCeeEEEEeCCCcEEEEeecCC---cEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCC---ceEEEEEc
Q psy14906 458 HVGGVRGVVSDNLNQIVISGGNDQ---TVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDD---FTVNIIDI 531 (583)
Q Consensus 458 h~~~v~~~~~s~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~i~d~ 531 (583)
+......++|+|||++|+..+.++ .|.+||+.++ +.. .+..........|+|||++++..+.+ +.++++++
T Consensus 334 ~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g--~~~-~Lt~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~ 410 (433)
T PRK04922 334 QGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTG--SVR-TLTPGSLDESPSFAPNGSMVLYATREGGRGVLAAVST 410 (433)
T ss_pred CCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCC--CeE-ECCCCCCCCCceECCCCCEEEEEEecCCceEEEEEEC
Confidence 223345789999999988765433 5999999876 433 33333345567999999988877653 46888888
Q ss_pred cccceEEeecccccceeeEEecC
Q psy14906 532 DTCTIIRKLSGHMGQLTDADFSP 554 (583)
Q Consensus 532 ~~~~~~~~~~~h~~~v~~l~~s~ 554 (583)
. +.....+..+.+.+...+|+|
T Consensus 411 ~-g~~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 411 D-GRVRQRLVSADGEVREPAWSP 432 (433)
T ss_pred C-CCceEEcccCCCCCCCCccCC
Confidence 5 445566666667788888886
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.65 E-value=7.5e-12 Score=111.11 Aligned_cols=272 Identities=14% Similarity=0.084 Sum_probs=180.5
Q ss_pred cccceeeeeeeeeeecCcccEEEEEeCCCceEEEEeeCCeEEEEecC-CcEEEeecC-CCCCCeEEEEeeCeEEEEEcCC
Q psy14906 15 SSKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCN-HFKLLSVSP-QHEDDITCLSSDFFHIYTSANN 92 (583)
Q Consensus 15 ~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~-~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~ 92 (583)
+.+.|+.| +. +.+++..-+.. +.+.++.+-.++.=.+|..+ +|+-++.-. -|+--...+.-||+.++-+..|
T Consensus 214 ~g~tFeK~--vd-l~~~vS~PmIV---~~RvYFlsD~eG~GnlYSvdldGkDlrrHTnFtdYY~R~~nsDGkrIvFq~~G 287 (668)
T COG4946 214 GGKTFEKF--VD-LDGNVSSPMIV---GERVYFLSDHEGVGNLYSVDLDGKDLRRHTNFTDYYPRNANSDGKRIVFQNAG 287 (668)
T ss_pred CCcceeee--ee-cCCCcCCceEE---cceEEEEecccCccceEEeccCCchhhhcCCchhccccccCCCCcEEEEecCC
Confidence 45567744 33 33444433333 33444555455555556544 233332221 1333333444589999999999
Q ss_pred eEEEEeccceeeeeeccc-------CccEE--------EE-ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEE
Q psy14906 93 IIYAWRRGIDIVGTYKGH-------TSPVH--------LI-LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKI 156 (583)
Q Consensus 93 ~i~vw~~~~~~~~~~~~h-------~~~v~--------~i-s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 156 (583)
.|.++|.+.+.+..+.-. ..+.. .+ -.+|.+++..+. |...|.+...+-.++.
T Consensus 288 dIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSR-GkaFi~~~~~~~~iqv---------- 356 (668)
T COG4946 288 DIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSR-GKAFIMRPWDGYSIQV---------- 356 (668)
T ss_pred cEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEec-CcEEEECCCCCeeEEc----------
Confidence 999999876555544311 11111 12 346889998884 6677777655543332
Q ss_pred ecccCCcceEEEeeCCCCCEEEEEecCC-eEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q psy14906 157 MGKRWNSCVNVLEPSPVVDIIGVGLSNK-KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 157 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~-~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 235 (583)
++...|.-..+..+++-++.|..|| .+-|+|..+++. ..+...-+.|.++..+|+|+ .++.+.....+.+.|++
T Consensus 357 ---~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK-~~vvaNdr~el~vidid 431 (668)
T COG4946 357 ---GKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGK-KVVVANDRFELWVIDID 431 (668)
T ss_pred ---CCCCceEEEEEccCCcceEEeccCCceEEEEecCCceE-EEeeCCccceEEEEEcCCCc-EEEEEcCceEEEEEEec
Confidence 6677899999999999999999999 899999986654 44555559999999999999 78888888999999999
Q ss_pred CCeehhhhhhccccceEEEEEecCCCEEEEEeCCC----eEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEE
Q psy14906 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN----TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL 311 (583)
Q Consensus 236 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~----~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 311 (583)
++.....- +...+-|+.+.|+|+++++|-+--+| .|+++|++. .+... .....+.-.+-+|.| ++++|.
T Consensus 432 ngnv~~id-kS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~----~Kiy~-vTT~ta~DfsPaFD~-d~ryLY 504 (668)
T COG4946 432 NGNVRLID-KSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDG----GKIYD-VTTPTAYDFSPAFDP-DGRYLY 504 (668)
T ss_pred CCCeeEec-ccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCC----CeEEE-ecCCcccccCcccCC-CCcEEE
Confidence 98765444 56678899999999999999876654 688996642 23222 222223335567876 788877
Q ss_pred EeeC
Q psy14906 312 SAAG 315 (583)
Q Consensus 312 ~~~~ 315 (583)
.-+.
T Consensus 505 fLs~ 508 (668)
T COG4946 505 FLSA 508 (668)
T ss_pred EEec
Confidence 6553
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.4e-12 Score=121.50 Aligned_cols=294 Identities=18% Similarity=0.198 Sum_probs=184.9
Q ss_pred EEEEcCC----CcEEEEeC--CCCeehhhhhhccccceEEEEEecCCCEEEEEeC----CCeEEEEEccCCCCCceeeEE
Q psy14906 220 MVSGSNT----GHLTVWNL--EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP----DNTLKLWIFDKADGNGRLLRI 289 (583)
Q Consensus 220 l~s~~~d----g~i~vwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----d~~i~~w~~~~~~~~~~~~~~ 289 (583)
++.|+.. +.|.+|++ +++++...-..........++++|++++|++... ++.|..|+++...+....+..
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~ 81 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNS 81 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeee
Confidence 3444444 67888888 4454432211123456677899999999999877 479999988765444555555
Q ss_pred eccCCCCCeeEEEeeCCCCEEEEeeC-CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeec
Q psy14906 290 REGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGL 368 (583)
Q Consensus 290 ~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (583)
..........++++| ++++|+++.. +|.+.++++.....+....
T Consensus 82 ~~~~g~~p~~i~~~~-~g~~l~vany~~g~v~v~~l~~~g~l~~~~---------------------------------- 126 (345)
T PF10282_consen 82 VPSGGSSPCHIAVDP-DGRFLYVANYGGGSVSVFPLDDDGSLGEVV---------------------------------- 126 (345)
T ss_dssp EEESSSCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSEEEEEE----------------------------------
T ss_pred eccCCCCcEEEEEec-CCCEEEEEEccCCeEEEEEccCCcccceee----------------------------------
Confidence 553445667889987 7888888764 8999999997642221110
Q ss_pred ccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe-cCceEEEEEcccCc--
Q psy14906 369 AREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRFNIQSGA-- 445 (583)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~-- 445 (583)
.++..... .+. ..........++.++|+++++++.. ....|.+|++....
T Consensus 127 -------------------~~~~~~g~-------g~~-~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~ 179 (345)
T PF10282_consen 127 -------------------QTVRHEGS-------GPN-PDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGK 179 (345)
T ss_dssp -------------------EEEESEEE-------ESS-TTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-T
T ss_pred -------------------eecccCCC-------CCc-ccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCce
Confidence 00000000 000 0001115678999999999888754 34679999997655
Q ss_pred ccc--ccCCCCCCCcccCeeEEEEeCCCcEEEEee-cCCcEEEEEccCCCCC--ceEEeec-------cCCeeeEEeccC
Q psy14906 446 HRG--SYGHDNQPGHVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQTGKP--PLRSIKL-------DNGISFFRTHQE 513 (583)
Q Consensus 446 ~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~--~~~~~~~-------~~~v~~~~~s~~ 513 (583)
... .+. .......+.++|+|++++++... .++.|.++++...... .+..+.. ......++++||
T Consensus 180 l~~~~~~~----~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispd 255 (345)
T PF10282_consen 180 LTPVDSIK----VPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPD 255 (345)
T ss_dssp EEEEEEEE----CSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TT
T ss_pred EEEeeccc----cccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecC
Confidence 211 111 24556789999999999876554 5788999999832112 2222221 125778999999
Q ss_pred CcEEEEEeC-CceEEEEEcc--ccc--eEEeecccccceeeEEecCCCcEEEEEe-CCCeEEEEeC--CCcccc
Q psy14906 514 SSMLAVCLD-DFTVNIIDID--TCT--IIRKLSGHMGQLTDADFSPDSRWLITAS-MDCTIRVWDI--PSSQLI 579 (583)
Q Consensus 514 ~~~l~~~~~-dg~i~i~d~~--~~~--~~~~~~~h~~~v~~l~~s~d~~~l~s~~-~d~~i~vw~~--~~~~~~ 579 (583)
|++|.++.. .+.|.+|+++ +++ .+..+.......+.++++|+|++|+++. .++.|.+|++ ++|++.
T Consensus 256 g~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~ 329 (345)
T PF10282_consen 256 GRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLT 329 (345)
T ss_dssp SSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred CCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEE
Confidence 998887664 5789999993 333 3344443345589999999999998876 5568999876 466654
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.5e-13 Score=132.81 Aligned_cols=216 Identities=11% Similarity=0.068 Sum_probs=145.1
Q ss_pred eEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC---CCcEEEEEccccccceeeccchhhhhhhhhhc
Q psy14906 271 TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG---DSTLRIFNTKSETSNKNLGIASANRNNLKRKN 347 (583)
Q Consensus 271 ~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 347 (583)
.|.++|.+ +...+.+..|...+.+..|+| |++.|+..+. +..|++||+.++.......
T Consensus 183 ~l~~~d~d-----g~~~~~lt~~~~~v~~p~wSp-DG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~------------- 243 (435)
T PRK05137 183 RLAIMDQD-----GANVRYLTDGSSLVLTPRFSP-NRQEITYMSYANGRPRVYLLDLETGQRELVGN------------- 243 (435)
T ss_pred EEEEECCC-----CCCcEEEecCCCCeEeeEECC-CCCEEEEEEecCCCCEEEEEECCCCcEEEeec-------------
Confidence 56666442 233344556778899999998 8888887653 4679999987664321100
Q ss_pred chhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEE
Q psy14906 348 RLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFV 427 (583)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 427 (583)
....+....|+|||+.|
T Consensus 244 ---------------------------------------------------------------~~g~~~~~~~SPDG~~l 260 (435)
T PRK05137 244 ---------------------------------------------------------------FPGMTFAPRFSPDGRKV 260 (435)
T ss_pred ---------------------------------------------------------------CCCcccCcEECCCCCEE
Confidence 00345577899999887
Q ss_pred EEE-ecCc--eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec-CC--cEEEEEccCCCCCceEEeec
Q psy14906 428 LIG-YSSG--HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN-DQ--TVKVWHFKQTGKPPLRSIKL 501 (583)
Q Consensus 428 ~~~-~~dg--~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~ 501 (583)
+.. +.+| .|++||+.++.... + ..+........|+|||+.|+..+. +| .|++||+.++ ........
T Consensus 261 a~~~~~~g~~~Iy~~d~~~~~~~~-L-----t~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~--~~~~lt~~ 332 (435)
T PRK05137 261 VMSLSQGGNTDIYTMDLRSGTTTR-L-----TDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGS--NPRRISFG 332 (435)
T ss_pred EEEEecCCCceEEEEECCCCceEE-c-----cCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCC--CeEEeecC
Confidence 654 4444 48888988776543 3 345556778999999998887663 33 5888887765 44443334
Q ss_pred cCCeeeEEeccCCcEEEEEeCC---ceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCC------CeEEEEe
Q psy14906 502 DNGISFFRTHQESSMLAVCLDD---FTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMD------CTIRVWD 572 (583)
Q Consensus 502 ~~~v~~~~~s~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d------~~i~vw~ 572 (583)
...+....|+|||+.|+....+ ..|.+||+.++.. ..+. ....+..+.|+|||+.|+..+.+ ..+.+.+
T Consensus 333 ~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~d 410 (435)
T PRK05137 333 GGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILT-SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVD 410 (435)
T ss_pred CCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-Eecc-CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEE
Confidence 4556778999999999887643 3688889865543 3333 23357889999999998765543 3578888
Q ss_pred CCCccc
Q psy14906 573 IPSSQL 578 (583)
Q Consensus 573 ~~~~~~ 578 (583)
+..+..
T Consensus 411 l~g~~~ 416 (435)
T PRK05137 411 LTGRNE 416 (435)
T ss_pred CCCCce
Confidence 865543
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.7e-13 Score=127.33 Aligned_cols=458 Identities=14% Similarity=0.112 Sum_probs=270.8
Q ss_pred CCCCeEEEEeeC-eEEEEEcCCeEEEEe-ccceeeeeecccCccEEEE------------ccC--CCEEEEEeCCCcEEE
Q psy14906 72 HEDDITCLSSDF-FHIYTSANNIIYAWR-RGIDIVGTYKGHTSPVHLI------------LPF--GPHLISVDEESNVKV 135 (583)
Q Consensus 72 h~~~v~~~~~~~-~~~~~~~~~~i~vw~-~~~~~~~~~~~h~~~v~~i------------s~~--~~~l~s~~~dg~i~i 135 (583)
|...-.++.+++ -+++-+....|.+-| +.-+.++.++-|...|+.+ ||. .-.||++...|.|.+
T Consensus 14 ~~sN~~A~Dw~~~GLiAygshslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil 93 (1062)
T KOG1912|consen 14 SRSNRNAADWSPSGLIAYGSHSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIIL 93 (1062)
T ss_pred CcccccccccCccceEEEecCceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEE
Confidence 444445566633 566667788888888 5678899999999999986 222 236777888899999
Q ss_pred EEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCC---CC-CEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEE
Q psy14906 136 WDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSP---VV-DIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALS 211 (583)
Q Consensus 136 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~---~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~ 211 (583)
||...+..+..+. .+..++..+.|-+ +. ..|++-.....+.+||..+|+.+...........|+.
T Consensus 94 ~d~~~~s~~~~l~-----------~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~ 162 (1062)
T KOG1912|consen 94 VDFVLASVINWLS-----------HSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFR 162 (1062)
T ss_pred EEehhhhhhhhhc-----------CCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeee
Confidence 9999998888887 7888999999865 34 4667777778999999999999999886657888899
Q ss_pred EecCCCCEEEEEcCCCcEEEEeCCC-------Ceehhhhhhcccc----------------c---------eEEEEEecC
Q psy14906 212 FRTDGPPMMVSGSNTGHLTVWNLED-------RQVENQIKKAHRK----------------V---------VTGAHFLYN 259 (583)
Q Consensus 212 ~~~~~~~~l~s~~~dg~i~vwd~~~-------~~~~~~~~~~~~~----------------~---------v~~~~~~~~ 259 (583)
+.|-..+.+..-+..|.+.+-+.-. ++..+.- ..|.+ . ...++|+|.
T Consensus 163 ~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~-sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~ 241 (1062)
T KOG1912|consen 163 VDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQIT-SDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPH 241 (1062)
T ss_pred eCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEe-cCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChh
Confidence 9996655666666677777665421 1111111 11111 0 112556776
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeC-CCCEEEEeeCCCcEEEEEccccccceeeccchh
Q psy14906 260 EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGN-SSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338 (583)
Q Consensus 260 ~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 338 (583)
-+.++.......+.++|++.. .++....-..+.+..+.+.|. ..+.|++...||.+.+|-.+...........+.
T Consensus 242 ~rn~lfi~~prellv~dle~~----~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l 317 (1062)
T KOG1912|consen 242 WRNILFITFPRELLVFDLEYE----CCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASL 317 (1062)
T ss_pred hhceEEEEeccceEEEcchhh----ceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhh
Confidence 555555556778999977642 344444434455566677662 346788999999999997654222111100000
Q ss_pred hhhhhhhhcchhccccccCCCcccee-eeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCce-
Q psy14906 339 NRNNLKRKNRLEKMNEKFILPPVSQF-SFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT- 416 (583)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~- 416 (583)
.... ..+.....+...+ .+.....+...+.++.-..++...+|++..+..... .. ....
T Consensus 318 ~~dl---------~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~---------~~-s~~ie 378 (1062)
T KOG1912|consen 318 SMDL---------GEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLD---------YR-SSSIE 378 (1062)
T ss_pred cccc---------ccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcc---------cc-ccccc
Confidence 0000 0000000000000 011111111123333334455566666654221000 00 0000
Q ss_pred -EEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC-----------CC-------cEEEEe
Q psy14906 417 -CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN-----------LN-------QIVISG 477 (583)
Q Consensus 417 -~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-----------~~-------~~l~s~ 477 (583)
.+.|+-++..+.++ ...+.++. .. .+|....++....| .+ .++|.|
T Consensus 379 l~~pf~f~~~~~~v~----k~~l~~LS---------~d--g~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvG 443 (1062)
T KOG1912|consen 379 LVLPFDFNLSTKLVG----KTSLISLS---------DD--GSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVG 443 (1062)
T ss_pred ccccccccCceeehh----hccccchh---------hc--CCCCCCceeeecccCcccceeecCCCCCccceeeeeEEee
Confidence 01111111111110 00011110 00 23433333333222 12 367889
Q ss_pred ecCCcEEEEEccCCCCCceEEee-ccCCeeeEEeccCCcEEEEE---------eCCceEEEEEccccceE--Eeec-ccc
Q psy14906 478 GNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVC---------LDDFTVNIIDIDTCTII--RKLS-GHM 544 (583)
Q Consensus 478 ~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~---------~~dg~i~i~d~~~~~~~--~~~~-~h~ 544 (583)
...|+|.++|+.++ ..-+.+. |...|.++.|....+++-.+ ..-+.+.+-|+.+|... +.++ ...
T Consensus 444 T~sGTV~vvdvst~--~v~~~fsvht~~VkgleW~g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~de 521 (1062)
T KOG1912|consen 444 TNSGTVDVVDVSTN--AVAASFSVHTSLVKGLEWLGNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDE 521 (1062)
T ss_pred cCCceEEEEEecch--hhhhhhcccccceeeeeeccceeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCCc
Confidence 99999999999998 6665554 44678888887766655433 22357888899988543 2223 345
Q ss_pred cceeeEEecCCCcEEEEEeCCCeEEEEeCCCcccccc
Q psy14906 545 GQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDC 581 (583)
Q Consensus 545 ~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~ 581 (583)
.+|+.+..|.-++||+..-.|.-+.+||+++..+++.
T Consensus 522 spI~~irvS~~~~yLai~Fr~~plEiwd~kt~~~lr~ 558 (1062)
T KOG1912|consen 522 SPIRAIRVSSSGRYLAILFRREPLEIWDLKTLRMLRL 558 (1062)
T ss_pred CcceeeeecccCceEEEEecccchHHHhhccchHHHH
Confidence 7899999999999999999999999999988777653
|
|
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.5e-12 Score=118.09 Aligned_cols=301 Identities=12% Similarity=0.128 Sum_probs=181.7
Q ss_pred EEEEecC----CeEEEEEc--cCCcee--EEEeccCCCeEEEEEecCCCCEEEEEcC----CCcEEEEeCCCC--e--eh
Q psy14906 177 IGVGLSN----KKIILHNI--LTDESL--MEFIQTWGPVTALSFRTDGPPMMVSGSN----TGHLTVWNLEDR--Q--VE 240 (583)
Q Consensus 177 l~~~~~d----~~i~iw~~--~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~s~~~----dg~i~vwd~~~~--~--~~ 240 (583)
+.+|+.. +.|.+|++ ++++.. .... .......++++|+++ +|++... ++.|..|++... + .+
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~-~~~~Ps~l~~~~~~~-~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~ 79 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVA-EGENPSWLAVSPDGR-RLYVVNEGSGDSGGVSSYRIDPDTGTLTLL 79 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEE-ESSSECCEEE-TTSS-EEEEEETTSSTTTEEEEEEEETTTTEEEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeec-CCCCCceEEEEeCCC-EEEEEEccccCCCCEEEEEECCCcceeEEe
Confidence 3455554 68888888 344332 2222 336778899999998 6666654 578999988764 3 23
Q ss_pred hhhhhccccceEEEEEecCCCEEEEEeC-CCeEEEEEccCCCCCceeeEEec----------cCCCCCeeEEEeeCCCCE
Q psy14906 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNGRLLRIRE----------GHSAPPNYIQFYGNSSDN 309 (583)
Q Consensus 241 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~~ 309 (583)
... .........++++|++++|+++.. +|.+.+++++............. .......++.++| ++++
T Consensus 80 ~~~-~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~p-dg~~ 157 (345)
T PF10282_consen 80 NSV-PSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSP-DGRF 157 (345)
T ss_dssp EEE-EESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-T-TSSE
T ss_pred eee-ccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECC-CCCE
Confidence 333 223445678999999999998874 89999998875321112211121 1223457889997 7888
Q ss_pred EEEeeC-CCcEEEEEcccccc-ceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceE
Q psy14906 310 ILSAAG-DSTLRIFNTKSETS-NKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKV 387 (583)
Q Consensus 310 l~~~~~-dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 387 (583)
+++... ...|.+|++..... +...
T Consensus 158 v~v~dlG~D~v~~~~~~~~~~~l~~~------------------------------------------------------ 183 (345)
T PF10282_consen 158 VYVPDLGADRVYVYDIDDDTGKLTPV------------------------------------------------------ 183 (345)
T ss_dssp EEEEETTTTEEEEEEE-TTS-TEEEE------------------------------------------------------
T ss_pred EEEEecCCCEEEEEEEeCCCceEEEe------------------------------------------------------
Confidence 777643 45788888865431 1000
Q ss_pred EEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe-cCceEEEEEcc--cCcc--ccccCCC-CCCCcccC
Q psy14906 388 SLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRFNIQ--SGAH--RGSYGHD-NQPGHVGG 461 (583)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~--~~~~--~~~~~~~-~~~~h~~~ 461 (583)
...........+.+.|+|+++++++.. .++.|.+|++. ++.. ...+... ........
T Consensus 184 -----------------~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 246 (345)
T PF10282_consen 184 -----------------DSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENA 246 (345)
T ss_dssp -----------------EEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSS
T ss_pred -----------------eccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCC
Confidence 000001115678999999999887665 47889999988 3322 1111110 00112236
Q ss_pred eeEEEEeCCCcEEEEee-cCCcEEEEEccC--CCCCceEEeec-cCCeeeEEeccCCcEEEEEeC-CceEEEEEcc--cc
Q psy14906 462 VRGVVSDNLNQIVISGG-NDQTVKVWHFKQ--TGKPPLRSIKL-DNGISFFRTHQESSMLAVCLD-DFTVNIIDID--TC 534 (583)
Q Consensus 462 v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~--~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~--~~ 534 (583)
...|+++|||++|+.+. ..+.|.+|+++. +..+.+..+.. ......++++|+|++|+++.. ++.|.+|+++ +|
T Consensus 247 ~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG 326 (345)
T PF10282_consen 247 PAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTG 326 (345)
T ss_dssp EEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred ceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCC
Confidence 88999999999887655 567899999943 21122333443 345899999999999998874 5789999774 66
Q ss_pred ceEEeec-ccccceeeEEe
Q psy14906 535 TIIRKLS-GHMGQLTDADF 552 (583)
Q Consensus 535 ~~~~~~~-~h~~~v~~l~~ 552 (583)
.+...-. ..-....||.|
T Consensus 327 ~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 327 KLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp EEEEEEEEEESSSEEEEEE
T ss_pred cEEEecccccCCCCEEEeC
Confidence 5543322 12334556655
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.1e-11 Score=111.88 Aligned_cols=276 Identities=14% Similarity=0.135 Sum_probs=174.7
Q ss_pred CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEc---------CCCcEEEEeCCCCeehhhhhhcc------c
Q psy14906 184 KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS---------NTGHLTVWNLEDRQVENQIKKAH------R 248 (583)
Q Consensus 184 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~------~ 248 (583)
++|.+.|..+++.+..+..-..+- .+ ++||++.+.++.+ .+..|.+||..+.+.+..+..+. .
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~ 104 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG 104 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence 789999999999999888553333 34 9999995555556 68899999999999888773221 1
Q ss_pred cceEEEEEecCCCEEEEEe-C-CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccc
Q psy14906 249 KVVTGAHFLYNEPLLVTSS-P-DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 249 ~~v~~~~~~~~~~~l~s~~-~-d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 326 (583)
.....++++|||++|+... . +..|.+.|+. ..+.+....--. . ...|- .........+.||......+..
T Consensus 105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~----~~kvv~ei~vp~-~--~~vy~-t~e~~~~~~~~Dg~~~~v~~d~ 176 (352)
T TIGR02658 105 TYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLE----GKAFVRMMDVPD-C--YHIFP-TANDTFFMHCRDGSLAKVGYGT 176 (352)
T ss_pred CccceEEECCCCCEEEEecCCCCCEEEEEECC----CCcEEEEEeCCC-C--cEEEE-ecCCccEEEeecCceEEEEecC
Confidence 2334788999999988766 3 6889999765 445555544311 1 11111 1111222333455544433332
Q ss_pred cccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccc
Q psy14906 327 ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPER 406 (583)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 406 (583)
....... ...+++......
T Consensus 177 ~g~~~~~----------------------------------------------------~~~vf~~~~~~v--------- 195 (352)
T TIGR02658 177 KGNPKIK----------------------------------------------------PTEVFHPEDEYL--------- 195 (352)
T ss_pred CCceEEe----------------------------------------------------eeeeecCCcccc---------
Confidence 2110000 000111100000
Q ss_pred ccccCCCCceEEEEcc-CCcEEEEEecCceEEEEEcccCc-----cccccCCCCC--CCcccCeeEEEEeCCCcEEEEee
Q psy14906 407 CKQAKQSKPTCVYITH-CGNFVLIGYSSGHVDRFNIQSGA-----HRGSYGHDNQ--PGHVGGVRGVVSDNLNQIVISGG 478 (583)
Q Consensus 407 ~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~-----~~~~~~~~~~--~~h~~~v~~~~~s~~~~~l~s~~ 478 (583)
. . .+ .+.+ +|+++.+..+ |.|++.|+.... ....+..... .-..+.+.-++++|+++.++...
T Consensus 196 -~-~--rP----~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~ 266 (352)
T TIGR02658 196 -I-N--HP----AYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLA 266 (352)
T ss_pred -c-c--CC----ceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEe
Confidence 0 0 11 3455 8888888777 999999964332 2222211000 01234445599999998877642
Q ss_pred ----------cCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCc-EEEEEe-CCceEEEEEccccceEEeec
Q psy14906 479 ----------NDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS-MLAVCL-DDFTVNIIDIDTCTIIRKLS 541 (583)
Q Consensus 479 ----------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~dg~i~i~d~~~~~~~~~~~ 541 (583)
..+.|.++|..+. +.+..+.....+..++++||++ +|++.. .++.|.++|..+++.+..+.
T Consensus 267 ~~~~~~thk~~~~~V~ViD~~t~--kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~ 339 (352)
T TIGR02658 267 DQRAKWTHKTASRFLFVVDAKTG--KRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSVN 339 (352)
T ss_pred cCCccccccCCCCEEEEEECCCC--eEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeeec
Confidence 2247999999998 8999999889999999999999 777766 57889999999999998873
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.8e-13 Score=113.11 Aligned_cols=345 Identities=11% Similarity=0.150 Sum_probs=216.6
Q ss_pred ceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEE-cCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEE
Q psy14906 101 IDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWD-IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDII 177 (583)
Q Consensus 101 ~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 177 (583)
...++.++||.+.|++. -|-..-+++++.|.+++||- .+.++.-..+.. ....+++++.+.++...|
T Consensus 14 p~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~----------~mP~~~~~~~y~~e~~~L 83 (404)
T KOG1409|consen 14 PELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYH----------YMPSPCSAMEYVSESRRL 83 (404)
T ss_pred hhhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhh----------hCCCCceEeeeeccceEE
Confidence 34567788999998874 67778899999999999995 444655444432 446789999999999999
Q ss_pred EEEecCCeEEEEEccC----CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEE
Q psy14906 178 GVGLSNKKIILHNILT----DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTG 253 (583)
Q Consensus 178 ~~~~~d~~i~iw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~ 253 (583)
.+|-.+|++.-+.+.. ...++....|...+..+-|+-..+ ++++.+.|..+.---.+.+..+..+. ....-++
T Consensus 84 ~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e-~V~s~~~dk~~~~hc~e~~~~lg~Y~--~~~~~t~ 160 (404)
T KOG1409|consen 84 YVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHE-WVLSTGKDKQFAWHCTESGNRLGGYN--FETPASA 160 (404)
T ss_pred EEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCce-eEEEeccccceEEEeeccCCcccceE--eeccCCC
Confidence 9999999998887643 344555668889999999998877 88888888776544445554443331 1112222
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceee
Q psy14906 254 AHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 254 ~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 333 (583)
+.+.-. +...|...|.+..-.+... ...++.++.+|.+.+.+++|.| ....|+++..|..+.+||+...+-..-.
T Consensus 161 ~~~d~~--~~fvGd~~gqvt~lr~~~~--~~~~i~~~~~h~~~~~~l~Wd~-~~~~LfSg~~d~~vi~wdigg~~g~~~e 235 (404)
T KOG1409|consen 161 LQFDAL--YAFVGDHSGQITMLKLEQN--GCQLITTFNGHTGEVTCLKWDP-GQRLLFSGASDHSVIMWDIGGRKGTAYE 235 (404)
T ss_pred CceeeE--EEEecccccceEEEEEeec--CCceEEEEcCcccceEEEEEcC-CCcEEEeccccCceEEEeccCCcceeee
Confidence 222222 5566767777777755543 5678889999999999999997 6789999999999999999765443222
Q ss_pred ccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccccccc-C-
Q psy14906 334 GIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQA-K- 411 (583)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~- 411 (583)
........ .... .......+.+...++.+.+|+.+................. +
T Consensus 236 l~gh~~kV--------------------~~l~-----~~~~t~~l~S~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~q 290 (404)
T KOG1409|consen 236 LQGHNDKV--------------------QALS-----YAQHTRQLISCGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQ 290 (404)
T ss_pred eccchhhh--------------------hhhh-----hhhhheeeeeccCCCeEEEEeccceeecCccccccchhhhhCc
Confidence 11111000 0000 0011355677788999999998876544332221110000 0
Q ss_pred ------------------------CCCceEEEEccCCcEEEEEecCceEEEEEcccCccc----cccCCCCCCCcccCee
Q psy14906 412 ------------------------QSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHR----GSYGHDNQPGHVGGVR 463 (583)
Q Consensus 412 ------------------------~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~~h~~~v~ 463 (583)
-+...+...+.+.....+-+..-.+++.|.-..... ..+..+ ..-...|+
T Consensus 291 pffwn~~~m~~~k~~glr~h~crkcg~avc~~c~s~~~~~p~mg~e~~vR~~~~c~~~i~~~~~t~LA~p--hei~tgIt 368 (404)
T KOG1409|consen 291 PFFWNFRQMWDRKQLGLRQHHCRKCGKAVCGKCSSNRSSYPTMGFEFSVRVCDSCYPTIKDEERTPLAIP--HEIKTGIT 368 (404)
T ss_pred hHHHHHHHHHhhhhhhhhhhhhhhhhhhcCcccccCccccccccceeEEEEecccchhhhcCCCCccccc--ccccccee
Confidence 011111111111111111122223455443211110 011111 22345689
Q ss_pred EEEEeCCCcEEEEeecCCcEEEEEccC
Q psy14906 464 GVVSDNLNQIVISGGNDQTVKVWHFKQ 490 (583)
Q Consensus 464 ~~~~s~~~~~l~s~~~dg~i~iwd~~~ 490 (583)
.+.+...-.+|+|++.|..|+|||+..
T Consensus 369 amhlqetlglLvTsG~~Rvi~iwd~~~ 395 (404)
T KOG1409|consen 369 AMHLQETLGLLVTSGTDRVIKIWDVRS 395 (404)
T ss_pred EEEhhhhccceeecCCceEEEEEechh
Confidence 999988888999999999999999875
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=99.60 E-value=9.6e-12 Score=110.44 Aligned_cols=208 Identities=10% Similarity=0.027 Sum_probs=151.1
Q ss_pred CceEEEEeeCCeEEEEecCCcEEEeecCC------CCCCeE--------EEEe-eCeEEEEEcCCeEEEEecc-ceeeee
Q psy14906 43 KETLFVTCVGKAFHVYGCNHFKLLSVSPQ------HEDDIT--------CLSS-DFFHIYTSANNIIYAWRRG-IDIVGT 106 (583)
Q Consensus 43 ~~~~i~~~~~~~i~v~d~~~~~~~~~~~~------h~~~v~--------~~~~-~~~~~~~~~~~~i~vw~~~-~~~~~~ 106 (583)
+..-|+...++.|.+||.++-++.+.--+ .+.+.. .++. +|.+++.-+.|...|.+.. +..++
T Consensus 277 DGkrIvFq~~GdIylydP~td~lekldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VSRGkaFi~~~~~~~~iq- 355 (668)
T COG4946 277 DGKRIVFQNAGDIYLYDPETDSLEKLDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVSRGKAFIMRPWDGYSIQ- 355 (668)
T ss_pred CCcEEEEecCCcEEEeCCCcCcceeeecCCccccccccccccCHHHhhhhhccCCCcEEEEEecCcEEEECCCCCeeEE-
Confidence 34448889999999999987655432111 111111 1122 6777777777777777753 33322
Q ss_pred ecccCccEEE--EccCCCEEEEEeCCC-cEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC
Q psy14906 107 YKGHTSPVHL--ILPFGPHLISVDEES-NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN 183 (583)
Q Consensus 107 ~~~h~~~v~~--is~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 183 (583)
-+|.+.|.. +.-+++-++.|..|| .+-|+|.++++.... . ..-+.|.++..+++|+.++++...
T Consensus 356 -v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~-e-----------~~lg~I~av~vs~dGK~~vvaNdr 422 (668)
T COG4946 356 -VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRI-E-----------KDLGNIEAVKVSPDGKKVVVANDR 422 (668)
T ss_pred -cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEe-e-----------CCccceEEEEEcCCCcEEEEEcCc
Confidence 256666765 466777888888898 899999998875443 3 567899999999999999999999
Q ss_pred CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCC----cEEEEeCCCCeehhhhhhccccceEEEEEecC
Q psy14906 184 KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTG----HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN 259 (583)
Q Consensus 184 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 259 (583)
..|.+.|+.+|.....-+...+-|+...|+|+++ ++|-+--+| .|+++|+.+++....- ...+.=.+-+|.||
T Consensus 423 ~el~vididngnv~~idkS~~~lItdf~~~~nsr-~iAYafP~gy~tq~Iklydm~~~Kiy~vT--T~ta~DfsPaFD~d 499 (668)
T COG4946 423 FELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSR-WIAYAFPEGYYTQSIKLYDMDGGKIYDVT--TPTAYDFSPAFDPD 499 (668)
T ss_pred eEEEEEEecCCCeeEecccccceeEEEEEcCCce-eEEEecCcceeeeeEEEEecCCCeEEEec--CCcccccCcccCCC
Confidence 9999999999987766666778999999999999 788766554 5899999987765433 22333356789999
Q ss_pred CCEEEEEe
Q psy14906 260 EPLLVTSS 267 (583)
Q Consensus 260 ~~~l~s~~ 267 (583)
+++|.--+
T Consensus 500 ~ryLYfLs 507 (668)
T COG4946 500 GRYLYFLS 507 (668)
T ss_pred CcEEEEEe
Confidence 99887655
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.59 E-value=2e-13 Score=114.58 Aligned_cols=143 Identities=18% Similarity=0.323 Sum_probs=104.4
Q ss_pred ccCCCEEEEEeC----------CCcEEEEEcCC-CcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe--cCC
Q psy14906 118 LPFGPHLISVDE----------ESNVKVWDIKA-EETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL--SNK 184 (583)
Q Consensus 118 s~~~~~l~s~~~----------dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~d~ 184 (583)
+++|++|+.-.. -+...+|.++. +.....+.+ ...++|.+++|+|+|+.+|+.. .++
T Consensus 14 ~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l----------~~~~~I~~~~WsP~g~~favi~g~~~~ 83 (194)
T PF08662_consen 14 QPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIEL----------KKEGPIHDVAWSPNGNEFAVIYGSMPA 83 (194)
T ss_pred cccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeec----------cCCCceEEEEECcCCCEEEEEEccCCc
Confidence 677776665322 13355555522 233444432 3456799999999999876653 567
Q ss_pred eEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcC---CCcEEEEeCCCCeehhhhhhccccceEEEEEecCCC
Q psy14906 185 KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSN---TGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEP 261 (583)
Q Consensus 185 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 261 (583)
.|.+||++ ++.+..+. ...++.+.|+|+|+ ++++++. .|.|.+||.++.+.+... .| ..++.++|+|+|+
T Consensus 84 ~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~-~l~~~g~~n~~G~l~~wd~~~~~~i~~~--~~-~~~t~~~WsPdGr 156 (194)
T PF08662_consen 84 KVTLYDVK-GKKIFSFG--TQPRNTISWSPDGR-FLVLAGFGNLNGDLEFWDVRKKKKISTF--EH-SDATDVEWSPDGR 156 (194)
T ss_pred ccEEEcCc-ccEeEeec--CCCceEEEECCCCC-EEEEEEccCCCcEEEEEECCCCEEeecc--cc-CcEEEEEEcCCCC
Confidence 99999996 77777664 36788999999999 6666653 467999999998888777 23 3478999999999
Q ss_pred EEEEEeC------CCeEEEEEc
Q psy14906 262 LLVTSSP------DNTLKLWIF 277 (583)
Q Consensus 262 ~l~s~~~------d~~i~~w~~ 277 (583)
+|+++.. |+.++||++
T Consensus 157 ~~~ta~t~~r~~~dng~~Iw~~ 178 (194)
T PF08662_consen 157 YLATATTSPRLRVDNGFKIWSF 178 (194)
T ss_pred EEEEEEeccceeccccEEEEEe
Confidence 9999874 678899976
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.6e-12 Score=125.15 Aligned_cols=177 Identities=15% Similarity=0.120 Sum_probs=114.0
Q ss_pred cEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC---CeEEEEEccCCceeEEEeccCCCeE
Q psy14906 132 NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN---KKIILHNILTDESLMEFIQTWGPVT 208 (583)
Q Consensus 132 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~v~ 208 (583)
.|.++|.+.... ..+. .....+.+..|+|||+.|+..+.+ ..|.+||+.+++... +....+...
T Consensus 199 ~l~i~d~dG~~~-~~l~-----------~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~ 265 (448)
T PRK04792 199 QLMIADYDGYNE-QMLL-----------RSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGING 265 (448)
T ss_pred EEEEEeCCCCCc-eEee-----------cCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcC
Confidence 677778765443 3333 556788899999999999887543 368999998876533 222224455
Q ss_pred EEEEecCCCCEEEEEcCCCc--EEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC-CCeEEEEEccCCCCCce
Q psy14906 209 ALSFRTDGPPMMVSGSNTGH--LTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNGR 285 (583)
Q Consensus 209 ~~~~~~~~~~~l~s~~~dg~--i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~~ 285 (583)
..+|+|||+.++++.+.+|. |.++|+.+++... + ..+........|+|||+.|+..+. ++...+|.++...+..+
T Consensus 266 ~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~-l-t~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~ 343 (448)
T PRK04792 266 APRFSPDGKKLALVLSKDGQPEIYVVDIATKALTR-I-TRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVS 343 (448)
T ss_pred CeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEE-C-ccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEE
Confidence 78999999955566666775 7778888776543 3 234455677899999998776553 56667776665543333
Q ss_pred eeEEeccCCCCCeeEEEeeCCCCEEEEeeC-CCc--EEEEEcccc
Q psy14906 286 LLRIREGHSAPPNYIQFYGNSSDNILSAAG-DST--LRIFNTKSE 327 (583)
Q Consensus 286 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~--i~iwd~~~~ 327 (583)
.+. ..+ .......|+| |+++|+..+. ++. |.++|+.++
T Consensus 344 ~Lt-~~g--~~~~~~~~Sp-DG~~l~~~~~~~g~~~I~~~dl~~g 384 (448)
T PRK04792 344 RLT-FEG--EQNLGGSITP-DGRSMIMVNRTNGKFNIARQDLETG 384 (448)
T ss_pred EEe-cCC--CCCcCeeECC-CCCEEEEEEecCCceEEEEEECCCC
Confidence 222 222 2234568987 7888776654 343 444555444
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=6.3e-11 Score=102.32 Aligned_cols=288 Identities=13% Similarity=0.168 Sum_probs=189.3
Q ss_pred CCcEEEEeCCCC--eehhhhhhccccceEEEEEecCCCEEEEEeC---CCeEEEEEccCCCCCceeeEEeccCCCCCeeE
Q psy14906 226 TGHLTVWNLEDR--QVENQIKKAHRKVVTGAHFLYNEPLLVTSSP---DNTLKLWIFDKADGNGRLLRIREGHSAPPNYI 300 (583)
Q Consensus 226 dg~i~vwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~ 300 (583)
+.-|.+|++.+. +.-......+.+.++-++|+|+++.|.++.. +|.|..|.+|..++....+........+...+
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv 94 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV 94 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence 466999998742 2222222367788899999999999988765 47888998887655545544444444455889
Q ss_pred EEeeCCCCEEEEeeC-CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEE
Q psy14906 301 QFYGNSSDNILSAAG-DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAA 379 (583)
Q Consensus 301 ~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (583)
++++ ++++++++.. .|.|.++-+...-.+......
T Consensus 95 svd~-~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~------------------------------------------- 130 (346)
T COG2706 95 SVDE-DGRFVFVANYHSGSVSVYPLQADGSLQPVVQV------------------------------------------- 130 (346)
T ss_pred EECC-CCCEEEEEEccCceEEEEEcccCCccccceee-------------------------------------------
Confidence 9986 8889888875 578888888653221111000
Q ss_pred EecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec-CceEEEEEcccCccccccCCCCCCCc
Q psy14906 380 IHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS-SGHVDRFNIQSGAHRGSYGHDNQPGH 458 (583)
Q Consensus 380 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~h 458 (583)
+.+.... +. .......+....+.|++++|++..- --.|.+|++..|.+...-... -..
T Consensus 131 ---------~~h~g~~--------p~--~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~--v~~ 189 (346)
T COG2706 131 ---------VKHTGSG--------PH--ERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAE--VKP 189 (346)
T ss_pred ---------eecCCCC--------CC--ccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccc--cCC
Confidence 0000000 00 0000134778899999999888653 346999999987765543222 245
Q ss_pred ccCeeEEEEeCCCcEEEEee-cCCcEEEEEccCCCCC--ceEE-------eeccCCeeeEEeccCCcEEEEEeC-CceEE
Q psy14906 459 VGGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQTGKP--PLRS-------IKLDNGISFFRTHQESSMLAVCLD-DFTVN 527 (583)
Q Consensus 459 ~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~--~~~~-------~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~ 527 (583)
....+-|+|+|++++..... -+++|.+|.......+ .++. +.......++.++|||++|.++.. ...|.
T Consensus 190 G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~ 269 (346)
T COG2706 190 GAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIA 269 (346)
T ss_pred CCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEE
Confidence 56788999999999887666 5899999999874211 1221 223346788999999999998754 34788
Q ss_pred EEEccc--cce--EEeecccccceeeEEecCCCcEEEEEeCCC-eEEEEeCC--Cccc
Q psy14906 528 IIDIDT--CTI--IRKLSGHMGQLTDADFSPDSRWLITASMDC-TIRVWDIP--SSQL 578 (583)
Q Consensus 528 i~d~~~--~~~--~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~-~i~vw~~~--~~~~ 578 (583)
+|.+.. +++ +.....+....+...|++++++|+.+..++ .|.+|.++ +|++
T Consensus 270 ~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L 327 (346)
T COG2706 270 VFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRL 327 (346)
T ss_pred EEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceE
Confidence 887753 332 222333445578899999999999888764 67787664 4544
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.56 E-value=2.2e-12 Score=125.17 Aligned_cols=178 Identities=15% Similarity=0.141 Sum_probs=119.5
Q ss_pred CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC---CeEEEEEccCCceeEEEeccCCCe
Q psy14906 131 SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN---KKIILHNILTDESLMEFIQTWGPV 207 (583)
Q Consensus 131 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~v 207 (583)
..|.++|...+. ...+. .+...+...+|+|||++|+.+..+ ..|++||+.+++... +..+.+.+
T Consensus 170 ~~l~~~d~~g~~-~~~l~-----------~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~ 236 (417)
T TIGR02800 170 YELQVADYDGAN-PQTIT-----------RSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMN 236 (417)
T ss_pred ceEEEEcCCCCC-CEEee-----------cCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCc
Confidence 368888876443 33343 455678899999999999987654 479999998876543 33344667
Q ss_pred EEEEEecCCCCEEEEEcCCC--cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC-CCeEEEEEccCCCCCc
Q psy14906 208 TALSFRTDGPPMMVSGSNTG--HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNG 284 (583)
Q Consensus 208 ~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~ 284 (583)
.+++|+|||+.++++.+.++ .|.+||+.+++..... .+........|+|||+.|+..+. ++...+|.++...+.
T Consensus 237 ~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~--~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~- 313 (417)
T TIGR02800 237 GAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLT--NGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGE- 313 (417)
T ss_pred cceEECCCCCEEEEEECCCCCccEEEEECCCCCEEECC--CCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCC-
Confidence 78999999985555665554 5888999876543322 34444556789999998876654 444445544543322
Q ss_pred eeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC---cEEEEEcccc
Q psy14906 285 RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS---TLRIFNTKSE 327 (583)
Q Consensus 285 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~ 327 (583)
...+..+........|+| ++++++.++.++ .|.+||+.++
T Consensus 314 --~~~l~~~~~~~~~~~~sp-dg~~i~~~~~~~~~~~i~~~d~~~~ 356 (417)
T TIGR02800 314 --VRRLTFRGGYNASPSWSP-DGDLIAFVHREGGGFNIAVMDLDGG 356 (417)
T ss_pred --EEEeecCCCCccCeEECC-CCCEEEEEEccCCceEEEEEeCCCC
Confidence 223333445667889997 788888887765 6777777653
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=3.4e-11 Score=112.54 Aligned_cols=503 Identities=11% Similarity=0.075 Sum_probs=286.8
Q ss_pred cCcccEEEEEeCCCceEEEEe-eCCeEEEEecCCc---------------EEEeecCCCCCCeEEEEeeC---eEEEEEc
Q psy14906 30 NHLPVVARFIRRRKETLFVTC-VGKAFHVYGCNHF---------------KLLSVSPQHEDDITCLSSDF---FHIYTSA 90 (583)
Q Consensus 30 ~~~~~~~~~~p~~~~~~i~~~-~~~~i~v~d~~~~---------------~~~~~~~~h~~~v~~~~~~~---~~~~~~~ 90 (583)
+..-.++.| +...-+|+++ .||.++|.-+.+- ..-+.+.||...|.-+.++. ++-+...
T Consensus 14 nvkL~c~~W--Nke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt 91 (1189)
T KOG2041|consen 14 NVKLHCAEW--NKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDT 91 (1189)
T ss_pred CceEEEEEE--cccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCC
Confidence 444477888 4444456654 8999998865431 11256789999999999943 4555558
Q ss_pred CCeEEEEec-cceeeeee--cccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcce
Q psy14906 91 NNIIYAWRR-GIDIVGTY--KGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCV 165 (583)
Q Consensus 91 ~~~i~vw~~-~~~~~~~~--~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i 165 (583)
+|.|.||-+ .+.-...+ ......|.++ ..||..++.+..||.|.+=.++..+.. --. -.....
T Consensus 92 ~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIw-gKe-----------Lkg~~l 159 (1189)
T KOG2041|consen 92 SGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIW-GKE-----------LKGQLL 159 (1189)
T ss_pred CceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceec-chh-----------cchhec
Confidence 899999985 33222222 2334556666 678999999999999888777654322 111 112334
Q ss_pred EEEeeCCCCCEEEEEecCCeEEEEEccCCc-------eeEE----EeccCCCeEEEEEe--------cCCCCEEEEEcCC
Q psy14906 166 NVLEPSPVVDIIGVGLSNKKIILHNILTDE-------SLME----FIQTWGPVTALSFR--------TDGPPMMVSGSNT 226 (583)
Q Consensus 166 ~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~-------~~~~----~~~~~~~v~~~~~~--------~~~~~~l~s~~~d 226 (583)
..+.|++|.+.++.+-.+|.+.+||.+..- +... +......+..+.|. ||.+ .|+.+-.+
T Consensus 160 ~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP-~lavcy~n 238 (1189)
T KOG2041|consen 160 AHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRP-RLAVCYAN 238 (1189)
T ss_pred cceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCC-EEEEEEcC
Confidence 578999999999999999999999976321 1111 11122345566663 4555 89999999
Q ss_pred CcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC---------CeEEEEEccCCCCCceeeEEeccCCCCC
Q psy14906 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD---------NTLKLWIFDKADGNGRLLRIREGHSAPP 297 (583)
Q Consensus 227 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------~~i~~w~~~~~~~~~~~~~~~~~~~~~v 297 (583)
|.+.+..-++......+ .-.-.+....|+++|..|+.++.+ +.|..+ .. -+..+.+++.....|
T Consensus 239 Gr~QiMR~eND~~Pvv~--dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fy--sp---~G~i~gtlkvpg~~I 311 (1189)
T KOG2041|consen 239 GRMQIMRSENDPEPVVV--DTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFY--SP---YGHIVGTLKVPGSCI 311 (1189)
T ss_pred ceehhhhhcCCCCCeEE--ecccEeecceecCCCcEEEEccCcccccCccccceEEEe--cc---chhheEEEecCCcee
Confidence 99888755443332223 223567889999999999999865 245555 22 466777888788899
Q ss_pred eeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeee-----------
Q psy14906 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSF----------- 366 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 366 (583)
++++|-. .|-.++. .-|+.|.+=+++..-.-..+...-.. .......|.....-.
T Consensus 312 t~lsWEg-~gLriA~-AvdsfiyfanIRP~ykWgy~e~TvVy------------~y~~~e~p~y~i~Fwdtk~nek~vK~ 377 (1189)
T KOG2041|consen 312 TGLSWEG-TGLRIAI-AVDSFIYFANIRPEYKWGYIEETVVY------------VYQKEELPQYGIMFWDTKTNEKTVKT 377 (1189)
T ss_pred eeeEEcC-CceEEEE-EecceEEEEeecccceEEEeeeEEEE------------EEccCCCcceEEEEEecccChhhhhh
Confidence 9999964 3444443 45678877766543211110000000 000000000000000
Q ss_pred ----ecccccccccEEEEecCCceEEEeecCcccccceeeeccccc-c---cCCCCceEEEEccCCcEEEEEecCceEEE
Q psy14906 367 ----GLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCK-Q---AKQSKPTCVYITHCGNFVLIGYSSGHVDR 438 (583)
Q Consensus 367 ----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~---~~~~~i~~~~~s~~~~~l~~~~~dg~i~i 438 (583)
.........-+++...+++.+.-++.-............... . .....|.-.-..-++..+++++.+. +.+
T Consensus 378 V~~~~~~a~~~ehCvL~~~~d~~~i~e~s~le~~~~~~~l~LCNSIGT~lD~kytdirP~Fv~vn~~~vviAS~e~-~~i 456 (1189)
T KOG2041|consen 378 VTHFENMAFYREHCVLINRQDDGVIPEYSTLENRSRVYFLQLCNSIGTSLDYKYTDIRPKFVCVNGICVVIASEER-YFI 456 (1189)
T ss_pred hcceeehheecccEEEEeccccCCCcchhhhhcccceEEEeeecccCCcCCCCcceeeeeEEEecceEEEEecccc-EEE
Confidence 000000011112222222222222100000000000000000 0 0001111111222455666666654 777
Q ss_pred EEcccCcccccc---------------------------CCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 439 FNIQSGAHRGSY---------------------------GHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 439 ~d~~~~~~~~~~---------------------------~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
|.....+....+ ....+.+...+|.+++.+ .++|..+-..|.|.-|.+.+.
T Consensus 457 Why~~pK~~s~l~~~k~rkegr~h~Ddtp~ga~d~~l~ys~kt~~G~~DpICAl~~s--dk~l~vareSG~I~rySl~nv 534 (1189)
T KOG2041|consen 457 WHYVLPKFNSVLAGVKIRKEGRFHGDDTPEGAQDRTLEYSTKTLLGSKDPICALCIS--DKFLMVARESGGIYRYSLNNV 534 (1189)
T ss_pred EEEeccchhhhhhhhhhcccccccCCCCccchhhceeeccceeeccCCCcceeeeec--ceEEEEEeccCceEEEEecce
Confidence 875433221111 011123455677777764 478888889999999999887
Q ss_pred CCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEcc---ccceEE-eecccccceeeEEecCCCcEEEEEeCCCe
Q psy14906 492 GKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID---TCTIIR-KLSGHMGQLTDADFSPDSRWLITASMDCT 567 (583)
Q Consensus 492 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~---~~~~~~-~~~~h~~~v~~l~~s~d~~~l~s~~~d~~ 567 (583)
.+.........+..++..-+...+|+-.--|.+.+.|+. +|..+. .++.....|+++.|..|+..|+.--+...
T Consensus 535 --~l~n~y~~n~~~y~~~lNCnstRlAiId~~gv~tf~dLd~d~~g~ql~~~~~~errDVWd~~Wa~dNp~llAlmeKtr 612 (1189)
T KOG2041|consen 535 --VLTNSYPVNPSIYSIKLNCNSTRLAIIDLVGVVTFQDLDYDFDGDQLKLIYTSERRDVWDYEWAQDNPNLLALMEKTR 612 (1189)
T ss_pred --eeeeccccCchheeEeeccCcchhhhhhhhceeeeeecccccCcceeeeeehhhhhhhhhhhhccCCchHHhhhhhce
Confidence 666666667788999998888889988888889888885 344443 44455677999999888766554444445
Q ss_pred EEEEeC
Q psy14906 568 IRVWDI 573 (583)
Q Consensus 568 i~vw~~ 573 (583)
++|++-
T Consensus 613 myifrg 618 (1189)
T KOG2041|consen 613 MYIFRG 618 (1189)
T ss_pred EEEecC
Confidence 555553
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.1e-12 Score=111.49 Aligned_cols=289 Identities=12% Similarity=0.139 Sum_probs=182.6
Q ss_pred ccceEEEEEecCCCEEEEEeCCCeEEEEEccCCC-CCceeeEEeccCC------------CCCeeEEEeeC-CCCEEEEe
Q psy14906 248 RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD-GNGRLLRIREGHS------------APPNYIQFYGN-SSDNILSA 313 (583)
Q Consensus 248 ~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~-~~~~~~~~~~~~~------------~~v~~~~~~~~-~~~~l~~~ 313 (583)
.+-|.++.|...|.+|++|..+|.|.++.-+... +.......++.|. ..|..+.|.++ +...++..
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 4578899999999999999999999999432211 1222334454453 46788888863 23567778
Q ss_pred eCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecC
Q psy14906 314 AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFY 393 (583)
Q Consensus 314 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 393 (583)
+.|.+|++|.+........- ... .... ++. .-..+++--..
T Consensus 105 tNdktiKlWKi~er~~k~~~----~~~------------~~~~--~~~---------------------~~~~lr~p~~~ 145 (433)
T KOG1354|consen 105 TNDKTIKLWKIRERGSKKEG----YNL------------PEEG--PPG---------------------TITSLRLPVEG 145 (433)
T ss_pred cCCcceeeeeeecccccccc----ccc------------cccC--CCC---------------------ccceeeceeec
Confidence 88999999998765432200 000 0000 000 00011111111
Q ss_pred cccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccc---cCCCCCCCcccCeeEEEEeCC
Q psy14906 394 KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGS---YGHDNQPGHVGGVRGVVSDNL 470 (583)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~---~~~~~~~~h~~~v~~~~~s~~ 470 (583)
.........+...+...|...|.++.++.|+..++++. |-.|-+|+++--..... +....+..-..-|++..|+|.
T Consensus 146 ~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~ 224 (433)
T KOG1354|consen 146 RHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPH 224 (433)
T ss_pred cccceeeeeeeeeccccceeEeeeeeecCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHh
Confidence 11112222233345556667899999999999988764 56688998874332221 111111233456888999995
Q ss_pred -CcEEEEeecCCcEEEEEccCCC-----CCceEEeec----------cCCeeeEEeccCCcEEEEEeCCceEEEEEcc-c
Q psy14906 471 -NQIVISGGNDQTVKVWHFKQTG-----KPPLRSIKL----------DNGISFFRTHQESSMLAVCLDDFTVNIIDID-T 533 (583)
Q Consensus 471 -~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~----------~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~-~ 533 (583)
.++++..+..|+|++-|++... .++...... -..|..+.|+++|+++++-+. -+|++||+. .
T Consensus 225 ~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme 303 (433)
T KOG1354|consen 225 HCNVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNME 303 (433)
T ss_pred HccEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEecccc
Confidence 4678888889999999998431 011111111 135888999999999997654 489999994 5
Q ss_pred cceEEeecccc------------cce---eeEEecCCCcEEEEEeCCCeEEEEeCCCcc
Q psy14906 534 CTIIRKLSGHM------------GQL---TDADFSPDSRWLITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 534 ~~~~~~~~~h~------------~~v---~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~ 577 (583)
.+++..++-|. +.| ..++|+.++.+++||+..+..+++++..|.
T Consensus 304 ~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 304 AKPVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARGS 362 (433)
T ss_pred CCcceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCCc
Confidence 56666665553 222 347899999999999999999999976664
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.5e-12 Score=118.90 Aligned_cols=224 Identities=13% Similarity=0.139 Sum_probs=165.0
Q ss_pred EEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeCeEEEEEcCCeEEEEec--cceeeeeecccCccEEEEccCCCE
Q psy14906 46 LFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRR--GIDIVGTYKGHTSPVHLILPFGPH 123 (583)
Q Consensus 46 ~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~i~vw~~--~~~~~~~~~~h~~~v~~is~~~~~ 123 (583)
+.....|+.+++||..++++...+.+... .+..++-..|.+ +..+++... ...+...+-|-..
T Consensus 8 ~A~~~~~g~l~iw~t~~~~~~~e~~p~~~-------------~s~t~~~~~w~L~~~~s~~k~~~--~~~~~~~s~~t~~ 72 (541)
T KOG4547|consen 8 FALSTGDGRLRIWDTAKNQLQQEFAPIAS-------------LSGTCTYTKWGLSADYSPMKWLS--LEKAKKASLDTSM 72 (541)
T ss_pred EeecCCCCeEEEEEccCceeeeeeccchh-------------ccCcceeEEEEEEeccchHHHHh--HHHHhhccCCceE
Confidence 34445899999999999998887754211 112223333442 111111110 0011112445557
Q ss_pred EEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEecc
Q psy14906 124 LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQT 203 (583)
Q Consensus 124 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~ 203 (583)
++-|...|.|.+++...|+....+.-. .|.+.|.++.++.+-..|.+++.|+.+..|+..+...++.+...
T Consensus 73 lvlgt~~g~v~~ys~~~g~it~~~st~---------~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~ 143 (541)
T KOG4547|consen 73 LVLGTPQGSVLLYSVAGGEITAKLSTD---------KHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQ 143 (541)
T ss_pred EEeecCCccEEEEEecCCeEEEEEecC---------CCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccC
Confidence 777888899999999999998888744 89999999999999999999999999999999999999999998
Q ss_pred CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecC-----CCEEEE-EeCCCeEEEEEc
Q psy14906 204 WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN-----EPLLVT-SSPDNTLKLWIF 277 (583)
Q Consensus 204 ~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~s-~~~d~~i~~w~~ 277 (583)
...+.+++.+||+. .+++++ +.|++||+++++.+..+ .+|.++|.++.|..+ |.++++ ...+.-+.+|-+
T Consensus 144 ~~~~~sl~is~D~~-~l~~as--~~ik~~~~~~kevv~~f-tgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v 219 (541)
T KOG4547|consen 144 KPLVSSLCISPDGK-ILLTAS--RQIKVLDIETKEVVITF-TGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVV 219 (541)
T ss_pred CCccceEEEcCCCC-EEEecc--ceEEEEEccCceEEEEe-cCCCcceEEEEEEEeccccccceeeeccccccceeEEEE
Confidence 89999999999998 888887 67999999999999999 899999999999877 666555 445667888977
Q ss_pred cCCCCCceeeEEeccCCCCC
Q psy14906 278 DKADGNGRLLRIREGHSAPP 297 (583)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~v 297 (583)
+.+.........+....-++
T Consensus 220 ~~~~kkks~~~sl~~~dipv 239 (541)
T KOG4547|consen 220 EKEDKKKSLSCSLTVPDIPV 239 (541)
T ss_pred EcccccchhheeeccCCCCe
Confidence 76544444444444333333
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.8e-11 Score=109.71 Aligned_cols=356 Identities=8% Similarity=0.075 Sum_probs=213.0
Q ss_pred EEEEEcCC--eEEEEeccceeeeeec---ccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecc
Q psy14906 85 HIYTSANN--IIYAWRRGIDIVGTYK---GHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGK 159 (583)
Q Consensus 85 ~~~~~~~~--~i~vw~~~~~~~~~~~---~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 159 (583)
+++....+ ....|+.....-..+. .-+......||.|.||+|--..| |.+|--.+-..++++.
T Consensus 181 f~v~~d~~~~~svfwN~~~n~p~~ie~RenWTetyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~----------- 248 (698)
T KOG2314|consen 181 FVVQDDVKTTVSVFWNSKFNEPSLIEERENWTETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY----------- 248 (698)
T ss_pred EEEEecCcceeEEEccccCCchhhhhhhhcceeeeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-----------
Confidence 44443333 3667875332111111 22333444599999999987555 8899877666666553
Q ss_pred cCCcceEEEeeCCCCCEEEEEec-----------CCeEEEEEccCCceeEEEeccC--CCe-EEEEEecCCCCEEEEEcC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLS-----------NKKIILHNILTDESLMEFIQTW--GPV-TALSFRTDGPPMMVSGSN 225 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~-----------d~~i~iw~~~~~~~~~~~~~~~--~~v-~~~~~~~~~~~~l~s~~~ 225 (583)
...|.-+.|||..++|++-+. ...++|||+.+|...+.|.... ..+ .-..||.|++ ++|.-..
T Consensus 249 --Hp~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdK-y~Arm~~ 325 (698)
T KOG2314|consen 249 --HPGVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDK-YFARMTG 325 (698)
T ss_pred --CCCceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCc-eeEEecc
Confidence 346888999999999998652 2579999999999988887522 222 3458999999 6776665
Q ss_pred CCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC-----CeEEEEEccCCCCCceeeEEeccCCCCCeeE
Q psy14906 226 TGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD-----NTLKLWIFDKADGNGRLLRIREGHSAPPNYI 300 (583)
Q Consensus 226 dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~ 300 (583)
..|.||+..+..++..- .-.-..|....|+|.+++||--... ..+.+-.+ + ..+.+++..-|.-.-..+
T Consensus 326 -~sisIyEtpsf~lld~K-slki~gIr~FswsP~~~llAYwtpe~~~~parvtL~ev--P--s~~~iRt~nlfnVsDckL 399 (698)
T KOG2314|consen 326 -NSISIYETPSFMLLDKK-SLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEV--P--SKREIRTKNLFNVSDCKL 399 (698)
T ss_pred -ceEEEEecCceeeeccc-ccCCccccCcccCCCcceEEEEcccccCCcceEEEEec--C--ccceeeeccceeeeccEE
Confidence 47999998875544332 3345788999999998888754322 22333322 2 334444443333222344
Q ss_pred EEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEE
Q psy14906 301 QFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAI 380 (583)
Q Consensus 301 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (583)
.|- .+|++|..--. .....+...
T Consensus 400 hWQ-k~gdyLcvkvd-------R~tK~~~~g------------------------------------------------- 422 (698)
T KOG2314|consen 400 HWQ-KSGDYLCVKVD-------RHTKSKVKG------------------------------------------------- 422 (698)
T ss_pred Eec-cCCcEEEEEEE-------eeccccccc-------------------------------------------------
Confidence 444 35655553211 000000000
Q ss_pred ecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec---CceEEEEEcccCccccccCCCCCCC
Q psy14906 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS---SGHVDRFNIQSGAHRGSYGHDNQPG 457 (583)
Q Consensus 381 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~ 457 (583)
.-..+.++.+............. ..+...+|.|.|..+++-+. ..++.+|.+++......+.. .-
T Consensus 423 --~f~n~eIfrireKdIpve~velk-------e~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk---~~ 490 (698)
T KOG2314|consen 423 --QFSNLEIFRIREKDIPVEVVELK-------ESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVK---EL 490 (698)
T ss_pred --eEeeEEEEEeeccCCCceeeecc-------hheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhh---hh
Confidence 00012333333333222222211 56889999999987766443 46788898874222111111 12
Q ss_pred cccCeeEEEEeCCCcEEEEee---cCCcEEEEEccCCCCCce-EEeeccCCeeeEEeccCCcEEEEEeCC------ceEE
Q psy14906 458 HVGGVRGVVSDNLNQIVISGG---NDQTVKVWHFKQTGKPPL-RSIKLDNGISFFRTHQESSMLAVCLDD------FTVN 527 (583)
Q Consensus 458 h~~~v~~~~~s~~~~~l~s~~---~dg~i~iwd~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~ 527 (583)
.....+.+.|+|.|++++.+. ..|.+..+|.... .+. .....+...+.+.|.|.|+|+++++.- .--+
T Consensus 491 dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a--~~k~~~~~eh~~at~veWDPtGRYvvT~ss~wrhk~d~GYr 568 (698)
T KOG2314|consen 491 DKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYA--DLKDTASPEHFAATEVEWDPTGRYVVTSSSSWRHKVDNGYR 568 (698)
T ss_pred cccccceEEEcCCCcEEEEEEecccccceEEEecchh--hhhhccCccccccccceECCCCCEEEEeeehhhhccccceE
Confidence 235678899999999887654 5788999998853 222 122234567889999999999998763 3455
Q ss_pred EEEcc
Q psy14906 528 IIDID 532 (583)
Q Consensus 528 i~d~~ 532 (583)
+|+.+
T Consensus 569 i~tfq 573 (698)
T KOG2314|consen 569 IFTFQ 573 (698)
T ss_pred EEEee
Confidence 66654
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=99.54 E-value=9.1e-10 Score=113.82 Aligned_cols=398 Identities=12% Similarity=0.083 Sum_probs=224.1
Q ss_pred cCccEEEE--ccCCCEEEEEeCCCcEEEE----EcCCCc--EEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe
Q psy14906 110 HTSPVHLI--LPFGPHLISVDEESNVKVW----DIKAEE--TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL 181 (583)
Q Consensus 110 h~~~v~~i--s~~~~~l~s~~~dg~i~iw----d~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 181 (583)
..+.|.++ .++...|+.+..+|.|.+. +..+.+ .+. .-...|.+++||||+.+||..+
T Consensus 74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG--------------~vd~GI~a~~WSPD~Ella~vT 139 (928)
T PF04762_consen 74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVG--------------SVDSGILAASWSPDEELLALVT 139 (928)
T ss_pred CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEE--------------EEcCcEEEEEECCCcCEEEEEe
Confidence 35667777 7788888888899999999 444432 222 3368999999999999999999
Q ss_pred cCCeEEEEEccCCcee------------------------EEEec------------------------cCCCeEEEEEe
Q psy14906 182 SNKKIILHNILTDESL------------------------MEFIQ------------------------TWGPVTALSFR 213 (583)
Q Consensus 182 ~d~~i~iw~~~~~~~~------------------------~~~~~------------------------~~~~v~~~~~~ 213 (583)
.++++.+.+- +.+.+ ..|.| ....-..++|.
T Consensus 140 ~~~~l~~mt~-~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~ISWR 218 (928)
T PF04762_consen 140 GEGNLLLMTR-DFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRISWR 218 (928)
T ss_pred CCCEEEEEec-cceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEEEEC
Confidence 9998888753 12111 11111 11234578899
Q ss_pred cCCCCEEEEEcC---C---CcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC---CCeEEEEEccCCCCC-
Q psy14906 214 TDGPPMMVSGSN---T---GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP---DNTLKLWIFDKADGN- 283 (583)
Q Consensus 214 ~~~~~~l~s~~~---d---g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---d~~i~~w~~~~~~~~- 283 (583)
.||. ++|+.+- . ..++||+-+ |++...- ..-.+--.+++|-|.|++||+... ...|.+| +.....
T Consensus 219 GDG~-yFAVss~~~~~~~~R~iRVy~Re-G~L~stS-E~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFf--ErNGLrh 293 (928)
T PF04762_consen 219 GDGE-YFAVSSVEPETGSRRVIRVYSRE-GELQSTS-EPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFF--ERNGLRH 293 (928)
T ss_pred CCCc-EEEEEEEEcCCCceeEEEEECCC-ceEEecc-ccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEE--ecCCcEe
Confidence 9999 6666543 2 579999976 6654443 223333457899999999998764 3566677 432111
Q ss_pred ceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccce
Q psy14906 284 GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQ 363 (583)
Q Consensus 284 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (583)
+.....+......|..+.|++ |+..|+....|. |.+|-..+...--.. .+..+....
T Consensus 294 geF~l~~~~~~~~v~~l~Wn~-ds~iLAv~~~~~-vqLWt~~NYHWYLKq---------------------ei~~~~~~~ 350 (928)
T PF04762_consen 294 GEFTLRFDPEEEKVIELAWNS-DSEILAVWLEDR-VQLWTRSNYHWYLKQ---------------------EIRFSSSES 350 (928)
T ss_pred eeEecCCCCCCceeeEEEECC-CCCEEEEEecCC-ceEEEeeCCEEEEEE---------------------EEEccCCCC
Confidence 111111223456789999997 899999877654 999988775432111 000000000
Q ss_pred eeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEc----cCCcEEEEEecCceEEEE
Q psy14906 364 FSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYIT----HCGNFVLIGYSSGHVDRF 439 (583)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s----~~~~~l~~~~~dg~i~i~ 439 (583)
... ..........+.....++.+..++.. ..++.+ |++.-+++--....+.+-
T Consensus 351 ~~~-~~Wdpe~p~~L~v~t~~g~~~~~~~~----------------------~~v~~s~~~~~~D~g~vaVIDG~~lllT 407 (928)
T PF04762_consen 351 VNF-VKWDPEKPLRLHVLTSNGQYEIYDFA----------------------WDVSRSPGSSPNDNGTVAVIDGNKLLLT 407 (928)
T ss_pred CCc-eEECCCCCCEEEEEecCCcEEEEEEE----------------------EEEEecCCCCccCceEEEEEeCCeEEEe
Confidence 000 00011112222222222333222221 011111 111111111112234444
Q ss_pred EcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCC------ceEEee-----------cc
Q psy14906 440 NIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP------PLRSIK-----------LD 502 (583)
Q Consensus 440 d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~------~~~~~~-----------~~ 502 (583)
.+........+.... -.-...|.+++|++++..+++...||.+.+|........ ....+. ..
T Consensus 408 pf~~a~VPPPMs~~~-l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (928)
T PF04762_consen 408 PFRRAVVPPPMSSYE-LELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPL 486 (928)
T ss_pred cccccCCCchHhceE-EcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCCCcccccCcchhhhccccccccccccccc
Confidence 443332211110000 123578999999999988999999999999986543211 111111 12
Q ss_pred CCeeeEEeccCCcEEEEEeCC---ceEEEEEccccc---eEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 503 NGISFFRTHQESSMLAVCLDD---FTVNIIDIDTCT---IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 503 ~~v~~~~~s~~~~~l~~~~~d---g~i~i~d~~~~~---~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
..+..++|..+..+++....+ ..+.++++...+ .+.....-.+.+..+...++...++.-..||.+...+..
T Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~G~v~~~~~~ 564 (928)
T PF04762_consen 487 GSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDIDDSENSASVESSTEVDGVVLIISSSPDSGSLYIQTNDGKVFQLSSD 564 (928)
T ss_pred ccEEEEEEeCCCEEEEEEecCcccceEEEEEeccCCCceeEEEEeccCceEEEEeeCCCCcEEEEEECCCEEEEeecC
Confidence 357788888888777766654 678888874332 223333334556666666665546666678887755543
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=99.53 E-value=2e-11 Score=116.33 Aligned_cols=304 Identities=12% Similarity=0.066 Sum_probs=186.2
Q ss_pred CCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceE
Q psy14906 173 VVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVT 252 (583)
Q Consensus 173 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~ 252 (583)
.+..+.+++.++.+..+|..+|+.+..+............ ++. .++.++.++.+..+|.++|+.+.... ....+.
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~~-~v~v~~~~g~l~ald~~tG~~~W~~~--~~~~~~ 138 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA--DGG-LVFVGTEKGEVIALDAEDGKELWRAK--LSSEVL 138 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE--cCC-EEEEEcCCCEEEEEECCCCcEeeeec--cCceee
Confidence 3668888889999999999999999887755322222222 344 68888889999999999998876652 122222
Q ss_pred EEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCC-----eeEEEeeCCCCEEEEeeCCCcEEEEEcccc
Q psy14906 253 GAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP-----NYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 253 ~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
+.-.. .+..++.+..++.+..||.+ .++.+.......... .+.... + ..++.+..++.+..+|.+++
T Consensus 139 ~~p~v-~~~~v~v~~~~g~l~a~d~~----tG~~~W~~~~~~~~~~~~~~~sp~~~--~-~~v~~~~~~g~v~ald~~tG 210 (377)
T TIGR03300 139 SPPLV-ANGLVVVRTNDGRLTALDAA----TGERLWTYSRVTPALTLRGSASPVIA--D-GGVLVGFAGGKLVALDLQTG 210 (377)
T ss_pred cCCEE-ECCEEEEECCCCeEEEEEcC----CCceeeEEccCCCceeecCCCCCEEE--C-CEEEEECCCCEEEEEEccCC
Confidence 21111 24456667788999999654 333333332211110 111222 2 46778888899999998887
Q ss_pred ccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccc
Q psy14906 328 TSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERC 407 (583)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 407 (583)
+..-....... .... .....
T Consensus 211 ~~~W~~~~~~~----------------------------------------------------------~g~~--~~~~~ 230 (377)
T TIGR03300 211 QPLWEQRVALP----------------------------------------------------------KGRT--ELERL 230 (377)
T ss_pred CEeeeeccccC----------------------------------------------------------CCCC--chhhh
Confidence 64322100000 0000 00000
Q ss_pred cccCCCCc-eEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEE
Q psy14906 408 KQAKQSKP-TCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486 (583)
Q Consensus 408 ~~~~~~~i-~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iw 486 (583)
..+ ....+ .+..+++++.+|.++.||..+++...... .. ....+.. .+..++.++.||.+..+
T Consensus 231 -----~~~~~~p~~--~~~~vy~~~~~g~l~a~d~~tG~~~W~~~------~~-~~~~p~~--~~~~vyv~~~~G~l~~~ 294 (377)
T TIGR03300 231 -----VDVDGDPVV--DGGQVYAVSYQGRVAALDLRSGRVLWKRD------AS-SYQGPAV--DDNRLYVTDADGVVVAL 294 (377)
T ss_pred -----hccCCccEE--ECCEEEEEEcCCEEEEEECCCCcEEEeec------cC-CccCceE--eCCEEEEECCCCeEEEE
Confidence 000 00111 24577788889999999999998776552 11 1122222 45677778889999999
Q ss_pred EccCCCCCceEEee-ccC-CeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceee-EEecCCCcEEEEEe
Q psy14906 487 HFKQTGKPPLRSIK-LDN-GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTD-ADFSPDSRWLITAS 563 (583)
Q Consensus 487 d~~~~~~~~~~~~~-~~~-~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~-l~~s~d~~~l~s~~ 563 (583)
|..++ +.+.... ... ....... .+..+++++.+|.++++|..+|+.+.+++.+...+.. ..+. ++ .|+.++
T Consensus 295 d~~tG--~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~-~~-~l~v~~ 368 (377)
T TIGR03300 295 DRRSG--SELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVV-GD-GLLVQT 368 (377)
T ss_pred ECCCC--cEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEE-CC-EEEEEe
Confidence 99888 6665442 222 1222222 4678899999999999999999999888866644332 2332 44 477888
Q ss_pred CCCeEEEE
Q psy14906 564 MDCTIRVW 571 (583)
Q Consensus 564 ~d~~i~vw 571 (583)
.||.|+.|
T Consensus 369 ~dG~l~~~ 376 (377)
T TIGR03300 369 RDGDLYAF 376 (377)
T ss_pred CCceEEEe
Confidence 99998776
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.5e-12 Score=115.37 Aligned_cols=192 Identities=13% Similarity=0.181 Sum_probs=153.6
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEee------C--------------CCCCEEE
Q psy14906 119 PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEP------S--------------PVVDIIG 178 (583)
Q Consensus 119 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------s--------------~~~~~l~ 178 (583)
|-..|+|....||.+++||..+++....+.... ...+..++..| + .|-..++
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~--------~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lv 74 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIA--------SLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLV 74 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccch--------hccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEE
Confidence 345789999999999999999988776664221 11222233332 2 2344788
Q ss_pred EEecCCeEEEEEccCCceeEEEe--ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEE
Q psy14906 179 VGLSNKKIILHNILTDESLMEFI--QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF 256 (583)
Q Consensus 179 ~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~ 256 (583)
-|...|.|.+|++..|+....+. .|.+.|.++.++.+-. .+.+++.|+.+..|+....+..+.. .+....+.+++.
T Consensus 75 lgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~-ciyS~~ad~~v~~~~~~~~~~~~~~-~~~~~~~~sl~i 152 (541)
T KOG4547|consen 75 LGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLG-CIYSVGADLKVVYILEKEKVIIRIW-KEQKPLVSSLCI 152 (541)
T ss_pred eecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccC-ceEecCCceeEEEEecccceeeeee-ccCCCccceEEE
Confidence 89999999999999999988887 6889999999998877 8999999999999999999988888 778889999999
Q ss_pred ecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC-----CCEEEEe-eCCCcEEEEEcccc
Q psy14906 257 LYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS-----SDNILSA-AGDSTLRIFNTKSE 327 (583)
Q Consensus 257 ~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~~l~~~-~~dg~i~iwd~~~~ 327 (583)
+||+..+++++ +.|++|+++ +.+.+..+.||.++|.+++|.. + |.++++. ..+.-+.+|-++..
T Consensus 153 s~D~~~l~~as--~~ik~~~~~----~kevv~~ftgh~s~v~t~~f~~-~~~g~~G~~vLssa~~~r~i~~w~v~~~ 222 (541)
T KOG4547|consen 153 SPDGKILLTAS--RQIKVLDIE----TKEVVITFTGHGSPVRTLSFTT-LIDGIIGKYVLSSAAAERGITVWVVEKE 222 (541)
T ss_pred cCCCCEEEecc--ceEEEEEcc----CceEEEEecCCCcceEEEEEEE-eccccccceeeeccccccceeEEEEEcc
Confidence 99999999886 689999776 6789999999999999999985 3 4555544 44667788877653
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.9e-11 Score=113.64 Aligned_cols=297 Identities=12% Similarity=0.085 Sum_probs=184.2
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeE
Q psy14906 119 PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLM 198 (583)
Q Consensus 119 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~ 198 (583)
..+..++.++.+|.|..+|..+|+.+.+..+.. ......+ .++..+++++.++.+..+|..+|+.+.
T Consensus 63 v~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~-----------~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W 129 (377)
T TIGR03300 63 VAGGKVYAADADGTVVALDAETGKRLWRVDLDE-----------RLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELW 129 (377)
T ss_pred EECCEEEEECCCCeEEEEEccCCcEeeeecCCC-----------CcccceE--EcCCEEEEEcCCCEEEEEECCCCcEee
Confidence 346788888889999999999999988876431 1111122 246788888899999999999999988
Q ss_pred EEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccce-----EEEEEecCCCEEEEEeCCCeEE
Q psy14906 199 EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVV-----TGAHFLYNEPLLVTSSPDNTLK 273 (583)
Q Consensus 199 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~s~~~d~~i~ 273 (583)
+.... +.+.+.-...++ .++.++.+|.+..||.++++.+.+. ....... .+.... + ..++.+..++.+.
T Consensus 130 ~~~~~-~~~~~~p~v~~~--~v~v~~~~g~l~a~d~~tG~~~W~~-~~~~~~~~~~~~~sp~~~-~-~~v~~~~~~g~v~ 203 (377)
T TIGR03300 130 RAKLS-SEVLSPPLVANG--LVVVRTNDGRLTALDAATGERLWTY-SRVTPALTLRGSASPVIA-D-GGVLVGFAGGKLV 203 (377)
T ss_pred eeccC-ceeecCCEEECC--EEEEECCCCeEEEEEcCCCceeeEE-ccCCCceeecCCCCCEEE-C-CEEEEECCCCEEE
Confidence 77654 333221112233 5777788999999999999877665 2211111 111121 3 3667777788887
Q ss_pred EEEccCCCCCceeeEEeccC-C---C------CC-eeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhh
Q psy14906 274 LWIFDKADGNGRLLRIREGH-S---A------PP-NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNN 342 (583)
Q Consensus 274 ~w~~~~~~~~~~~~~~~~~~-~---~------~v-~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 342 (583)
.+|.. + ++.+...... . . .+ ....+ .+..++.++.+|.+..+|..+++..
T Consensus 204 ald~~--t--G~~~W~~~~~~~~g~~~~~~~~~~~~~p~~---~~~~vy~~~~~g~l~a~d~~tG~~~------------ 264 (377)
T TIGR03300 204 ALDLQ--T--GQPLWEQRVALPKGRTELERLVDVDGDPVV---DGGQVYAVSYQGRVAALDLRSGRVL------------ 264 (377)
T ss_pred EEEcc--C--CCEeeeeccccCCCCCchhhhhccCCccEE---ECCEEEEEEcCCEEEEEECCCCcEE------------
Confidence 77543 2 2222221100 0 0 01 11112 2457888888999999998876532
Q ss_pred hhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc
Q psy14906 343 LKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH 422 (583)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 422 (583)
|.... ..... ...
T Consensus 265 -----------------------------------------------W~~~~------------------~~~~~--p~~ 277 (377)
T TIGR03300 265 -----------------------------------------------WKRDA------------------SSYQG--PAV 277 (377)
T ss_pred -----------------------------------------------Eeecc------------------CCccC--ceE
Confidence 22210 00111 112
Q ss_pred CCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc
Q psy14906 423 CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD 502 (583)
Q Consensus 423 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 502 (583)
++..+++++.+|.++.+|..+++.+...... .......... .+..++.++.+|.|+++|..++ +.+..++..
T Consensus 278 ~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~----~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG--~~~~~~~~~ 349 (377)
T TIGR03300 278 DDNRLYVTDADGVVVALDRRSGSELWKNDEL----KYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDG--SFVARLKTD 349 (377)
T ss_pred eCCEEEEECCCCeEEEEECCCCcEEEccccc----cCCccccCEE--ECCEEEEEeCCCEEEEEECCCC--CEEEEEEcC
Confidence 4667888889999999999999876554211 1111222222 3568888999999999999988 888777755
Q ss_pred C-CeeeEEeccCCcEEEEEeCCceEEEE
Q psy14906 503 N-GISFFRTHQESSMLAVCLDDFTVNII 529 (583)
Q Consensus 503 ~-~v~~~~~s~~~~~l~~~~~dg~i~i~ 529 (583)
. .+..--...++ .|++++.||.|+.|
T Consensus 350 ~~~~~~sp~~~~~-~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 350 GSGIASPPVVVGD-GLLVQTRDGDLYAF 376 (377)
T ss_pred CCccccCCEEECC-EEEEEeCCceEEEe
Confidence 4 33322222233 57888999988765
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=6.8e-12 Score=121.63 Aligned_cols=178 Identities=13% Similarity=0.124 Sum_probs=116.0
Q ss_pred cEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC---CeEEEEEccCCceeEEEeccCCCeE
Q psy14906 132 NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN---KKIILHNILTDESLMEFIQTWGPVT 208 (583)
Q Consensus 132 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~v~ 208 (583)
.|.++|.+.+.. ..+. .+...+...+|+|||+.|+..+.+ ..|.+||+.+++... +....+.+.
T Consensus 180 ~l~~~d~~g~~~-~~l~-----------~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~ 246 (430)
T PRK00178 180 TLQRSDYDGARA-VTLL-----------QSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNG 246 (430)
T ss_pred EEEEECCCCCCc-eEEe-----------cCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcC
Confidence 478888875543 3343 556788999999999999877644 369999998876543 333334566
Q ss_pred EEEEecCCCCEEEEEcCCC--cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC-CCeEEEEEccCCCCCce
Q psy14906 209 ALSFRTDGPPMMVSGSNTG--HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNGR 285 (583)
Q Consensus 209 ~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~~ 285 (583)
...|+|||+.++++...+| .|.+||+.+++... + ..+........|+|||+.|+..+. ++...+|.++...+..+
T Consensus 247 ~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~-l-t~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~ 324 (430)
T PRK00178 247 APAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSR-V-TNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAE 324 (430)
T ss_pred CeEECCCCCEEEEEEccCCCceEEEEECCCCCeEE-c-ccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEE
Confidence 7899999995555666555 58888998776543 3 344555667889999998776553 45555555454433332
Q ss_pred eeEEeccCCCCCeeEEEeeCCCCEEEEeeCC-C--cEEEEEccccc
Q psy14906 286 LLRIREGHSAPPNYIQFYGNSSDNILSAAGD-S--TLRIFNTKSET 328 (583)
Q Consensus 286 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g--~i~iwd~~~~~ 328 (583)
.+. ..+ .......|+| +++.++..+.+ + .|.++|+.++.
T Consensus 325 ~lt-~~~--~~~~~~~~Sp-dg~~i~~~~~~~~~~~l~~~dl~tg~ 366 (430)
T PRK00178 325 RVT-FVG--NYNARPRLSA-DGKTLVMVHRQDGNFHVAAQDLQRGS 366 (430)
T ss_pred Eee-cCC--CCccceEECC-CCCEEEEEEccCCceEEEEEECCCCC
Confidence 222 222 2234568887 78888776643 3 46677776543
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=1e-11 Score=118.57 Aligned_cols=183 Identities=11% Similarity=0.060 Sum_probs=111.2
Q ss_pred CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEE---EEecC--CeEEEEEccCCceeEEEeccCC
Q psy14906 131 SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIG---VGLSN--KKIILHNILTDESLMEFIQTWG 205 (583)
Q Consensus 131 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~---~~~~d--~~i~iw~~~~~~~~~~~~~~~~ 205 (583)
..|.+.|.+.+... .+. .....+..-+|||||+.++ +...+ ..|.+.++.+++.... ....+
T Consensus 165 ~~l~~~d~dG~~~~-~lt-----------~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~l-t~~~g 231 (428)
T PRK01029 165 GELWSVDYDGQNLR-PLT-----------QEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKI-LALQG 231 (428)
T ss_pred ceEEEEcCCCCCce-Ecc-----------cCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEe-ecCCC
Confidence 36777787655433 333 3345567789999998633 33333 4688889987765433 33335
Q ss_pred CeEEEEEecCCCCEEEEEcCCC----cEEEEeCCCC--eehhhhhhccccceEEEEEecCCCEEEEEe-CCCeEEEEEcc
Q psy14906 206 PVTALSFRTDGPPMMVSGSNTG----HLTVWNLEDR--QVENQIKKAHRKVVTGAHFLYNEPLLVTSS-PDNTLKLWIFD 278 (583)
Q Consensus 206 ~v~~~~~~~~~~~~l~s~~~dg----~i~vwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~ 278 (583)
.....+|+|||+.++++...+| .+..|++..+ .....+...+.......+|+|||+.|+..+ .++...+|.++
T Consensus 232 ~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~ 311 (428)
T PRK01029 232 NQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQ 311 (428)
T ss_pred CccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEE
Confidence 5667899999985555554433 3444776653 122223122223446789999999877665 46767777655
Q ss_pred CCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC---CcEEEEEccccc
Q psy14906 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD---STLRIFNTKSET 328 (583)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~iwd~~~~~ 328 (583)
..... .....+..+...+....|+| ||+.|+..+.+ ..|.+||+.+++
T Consensus 312 ~~~~g-~~~~~lt~~~~~~~~p~wSP-DG~~Laf~~~~~g~~~I~v~dl~~g~ 362 (428)
T PRK01029 312 IDPEG-QSPRLLTKKYRNSSCPAWSP-DGKKIAFCSVIKGVRQICVYDLATGR 362 (428)
T ss_pred Ccccc-cceEEeccCCCCccceeECC-CCCEEEEEEcCCCCcEEEEEECCCCC
Confidence 43211 12233444445667889998 78888766543 357788877654
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.50 E-value=6.3e-10 Score=96.31 Aligned_cols=295 Identities=7% Similarity=0.082 Sum_probs=185.8
Q ss_pred CCeEEEEEccCCcee---EEEeccCCCeEEEEEecCCCCEEEEEcC---CCcEEEEeCCC--Cee--hhhhhhccccceE
Q psy14906 183 NKKIILHNILTDESL---MEFIQTWGPVTALSFRTDGPPMMVSGSN---TGHLTVWNLED--RQV--ENQIKKAHRKVVT 252 (583)
Q Consensus 183 d~~i~iw~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~i~vwd~~~--~~~--~~~~~~~~~~~v~ 252 (583)
+..|.+|++.+..-. ..+-.+.+.++-|+|+|+++ .|+++.. +|.|..|.++. |++ +... .....+.+
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~-~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~-~~~g~~p~ 92 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQR-HLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQ-TLPGSPPC 92 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCC-EEEEEEecCCcCcEEEEEEcCCCCeEEEeecc-ccCCCCCe
Confidence 456999998743211 12224557889999999998 6666644 57787777764 443 2222 12233448
Q ss_pred EEEEecCCCEEEEEeC-CCeEEEEEccCCCCCceeeEEeccCCCC----------CeeEEEeeCCCCEEEEeeC-CCcEE
Q psy14906 253 GAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNGRLLRIREGHSAP----------PNYIQFYGNSSDNILSAAG-DSTLR 320 (583)
Q Consensus 253 ~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~~l~~~~~-dg~i~ 320 (583)
.++++++|++++++.. .|.|.++-+... +..........|.+. +....+.| ++++|++..- .-.|.
T Consensus 93 yvsvd~~g~~vf~AnY~~g~v~v~p~~~d-G~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP-~~~~l~v~DLG~Dri~ 170 (346)
T COG2706 93 YVSVDEDGRFVFVANYHSGSVSVYPLQAD-GSLQPVVQVVKHTGSGPHERQESPHVHSANFTP-DGRYLVVPDLGTDRIF 170 (346)
T ss_pred EEEECCCCCEEEEEEccCceEEEEEcccC-CccccceeeeecCCCCCCccccCCccceeeeCC-CCCEEEEeecCCceEE
Confidence 8999999999998875 488999966543 222222222334443 77788887 7888888764 34788
Q ss_pred EEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccce
Q psy14906 321 IFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDM 400 (583)
Q Consensus 321 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 400 (583)
+|++..+.....-..
T Consensus 171 ~y~~~dg~L~~~~~~----------------------------------------------------------------- 185 (346)
T COG2706 171 LYDLDDGKLTPADPA----------------------------------------------------------------- 185 (346)
T ss_pred EEEcccCcccccccc-----------------------------------------------------------------
Confidence 898886654321100
Q ss_pred eeecccccccCCCCceEEEEccCCcEEEEEec-CceEEEEEcccC--cc--ccccC-CCCCCCcccCeeEEEEeCCCcEE
Q psy14906 401 FLVPERCKQAKQSKPTCVYITHCGNFVLIGYS-SGHVDRFNIQSG--AH--RGSYG-HDNQPGHVGGVRGVVSDNLNQIV 474 (583)
Q Consensus 401 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~--~~--~~~~~-~~~~~~h~~~v~~~~~s~~~~~l 474 (583)
.. ......+.+.|+|++++.++-++ +++|.+|..... +. ++.+. .+.--.-.....+|..++||++|
T Consensus 186 -----~v--~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFL 258 (346)
T COG2706 186 -----EV--KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFL 258 (346)
T ss_pred -----cc--CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEE
Confidence 00 11256789999999999887665 889999998763 21 11111 11001234567788999999999
Q ss_pred EEeec-CCcEEEEEccCCCCCce--EEeeccC-CeeeEEeccCCcEEEEEeCC-ceEEEEEc--cccceEEeec-ccccc
Q psy14906 475 ISGGN-DQTVKVWHFKQTGKPPL--RSIKLDN-GISFFRTHQESSMLAVCLDD-FTVNIIDI--DTCTIIRKLS-GHMGQ 546 (583)
Q Consensus 475 ~s~~~-dg~i~iwd~~~~~~~~~--~~~~~~~-~v~~~~~s~~~~~l~~~~~d-g~i~i~d~--~~~~~~~~~~-~h~~~ 546 (583)
..+.. ...|.++.+.....++. ......+ ....+.++|+|++|+++.++ ..|.+|.. ++|++-.... .....
T Consensus 259 YasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~ 338 (346)
T COG2706 259 YASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPE 338 (346)
T ss_pred EEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCC
Confidence 87753 34688888876532222 1122223 47899999999999988775 46888866 4565443322 23345
Q ss_pred eeeEEec
Q psy14906 547 LTDADFS 553 (583)
Q Consensus 547 v~~l~~s 553 (583)
..|+.|.
T Consensus 339 Pvcv~f~ 345 (346)
T COG2706 339 PVCVKFL 345 (346)
T ss_pred cEEEEEc
Confidence 5666664
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=2e-11 Score=118.38 Aligned_cols=234 Identities=9% Similarity=0.051 Sum_probs=144.9
Q ss_pred cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC---CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEee
Q psy14906 228 HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD---NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304 (583)
Q Consensus 228 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 304 (583)
.|.++|.+.+.. ..+ ..+...+....|+|||+.|+..+.+ ..|.+|+++ .+..+.+.. ..+.+....|+|
T Consensus 180 ~l~~~d~~g~~~-~~l-~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~--~g~~~~l~~---~~g~~~~~~~Sp 252 (430)
T PRK00178 180 TLQRSDYDGARA-VTL-LQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLD--TGRREQITN---FEGLNGAPAWSP 252 (430)
T ss_pred EEEEECCCCCCc-eEE-ecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECC--CCCEEEccC---CCCCcCCeEECC
Confidence 477778775443 334 3566788999999999998876643 356677553 333333322 233455789998
Q ss_pred CCCCEEE-EeeCCC--cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEe
Q psy14906 305 NSSDNIL-SAAGDS--TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIH 381 (583)
Q Consensus 305 ~~~~~l~-~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (583)
||+.|+ +...+| .|++||+.++...+...
T Consensus 253 -DG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~----------------------------------------------- 284 (430)
T PRK00178 253 -DGSKLAFVLSKDGNPEIYVMDLASRQLSRVTN----------------------------------------------- 284 (430)
T ss_pred -CCCEEEEEEccCCCceEEEEECCCCCeEEccc-----------------------------------------------
Confidence 787776 444444 57777776653211000
Q ss_pred cCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec-C--ceEEEEEcccCccccccCCCCCCCc
Q psy14906 382 TGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS-S--GHVDRFNIQSGAHRGSYGHDNQPGH 458 (583)
Q Consensus 382 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d--g~i~i~d~~~~~~~~~~~~~~~~~h 458 (583)
+........|+|||+.++..+. + ..|+++++.+++..... ..
T Consensus 285 -----------------------------~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt------~~ 329 (430)
T PRK00178 285 -----------------------------HPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVT------FV 329 (430)
T ss_pred -----------------------------CCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee------cC
Confidence 0022445689999998877654 3 35777888777643322 11
Q ss_pred ccCeeEEEEeCCCcEEEEeecC-C--cEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCC---ceEEEEEcc
Q psy14906 459 VGGVRGVVSDNLNQIVISGGND-Q--TVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDD---FTVNIIDID 532 (583)
Q Consensus 459 ~~~v~~~~~s~~~~~l~s~~~d-g--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~i~d~~ 532 (583)
........|+||++.|+..+.+ + .|.+||+.++ .. ..+..........|+|||++++..+.+ ..++++++.
T Consensus 330 ~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg--~~-~~lt~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~ 406 (430)
T PRK00178 330 GNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRG--SV-RILTDTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSIN 406 (430)
T ss_pred CCCccceEECCCCCEEEEEEccCCceEEEEEECCCC--CE-EEccCCCCCCCceECCCCCEEEEEEecCCceEEEEEECC
Confidence 1223457899999998877643 3 4888898876 33 222222233356899999988877654 357777775
Q ss_pred ccceEEeecccccceeeEEecCC
Q psy14906 533 TCTIIRKLSGHMGQLTDADFSPD 555 (583)
Q Consensus 533 ~~~~~~~~~~h~~~v~~l~~s~d 555 (583)
+.....+..+.+.+...+|+|-
T Consensus 407 -g~~~~~l~~~~g~~~~p~ws~~ 428 (430)
T PRK00178 407 -GRVRLPLPTAQGEVREPSWSPY 428 (430)
T ss_pred -CCceEECcCCCCCcCCCccCCC
Confidence 4444455556667788888863
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.5e-11 Score=117.46 Aligned_cols=244 Identities=9% Similarity=0.024 Sum_probs=146.2
Q ss_pred CcEEEEeCCCCeehhhhhhccccceEEEEEecCCCE---EEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEe
Q psy14906 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPL---LVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY 303 (583)
Q Consensus 227 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 303 (583)
..|.+.|...+... .+ ........+-.|+|||+. +++...++.-.||-.+...+..+.+..+.+ ......|+
T Consensus 165 ~~l~~~d~dG~~~~-~l-t~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g---~~~~p~wS 239 (428)
T PRK01029 165 GELWSVDYDGQNLR-PL-TQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQG---NQLMPTFS 239 (428)
T ss_pred ceEEEEcCCCCCce-Ec-ccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCC---CccceEEC
Confidence 35777777654433 33 234455677899999975 234555566566655665555555555444 34567899
Q ss_pred eCCCCEEEEeeC-CC----cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEE
Q psy14906 304 GNSSDNILSAAG-DS----TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIA 378 (583)
Q Consensus 304 ~~~~~~l~~~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (583)
| ||+.|+..+. +| .+..|++..+....
T Consensus 240 P-DG~~Laf~s~~~g~~di~~~~~~~~~g~~g~----------------------------------------------- 271 (428)
T PRK01029 240 P-RKKLLAFISDRYGNPDLFIQSFSLETGAIGK----------------------------------------------- 271 (428)
T ss_pred C-CCCEEEEEECCCCCcceeEEEeecccCCCCc-----------------------------------------------
Confidence 8 8888876553 22 22224443221000
Q ss_pred EEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe-cCceEEEE--Eccc-CccccccCCCC
Q psy14906 379 AIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRF--NIQS-GAHRGSYGHDN 454 (583)
Q Consensus 379 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~--d~~~-~~~~~~~~~~~ 454 (583)
..++. ..........+|+|||+.|+..+ .+|...+| ++.. +.....+
T Consensus 272 -------~~~lt------------------~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~l---- 322 (428)
T PRK01029 272 -------PRRLL------------------NEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLL---- 322 (428)
T ss_pred -------ceEee------------------cCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEe----
Confidence 00000 00002235679999999887765 45644444 4432 2222333
Q ss_pred CCCcccCeeEEEEeCCCcEEEEeecC---CcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeC---CceEEE
Q psy14906 455 QPGHVGGVRGVVSDNLNQIVISGGND---QTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLD---DFTVNI 528 (583)
Q Consensus 455 ~~~h~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~i 528 (583)
..+...+....|+|||+.|+..+.+ ..|.+||+.++ +..........+....|+|||++|+.... ...|++
T Consensus 323 -t~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g--~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~ 399 (428)
T PRK01029 323 -TKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATG--RDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYL 399 (428)
T ss_pred -ccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCC--CeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEE
Confidence 3344567789999999988876543 36999999887 54443333346678999999998876543 357889
Q ss_pred EEccccceEEeecccccceeeEEecCCC
Q psy14906 529 IDIDTCTIIRKLSGHMGQLTDADFSPDS 556 (583)
Q Consensus 529 ~d~~~~~~~~~~~~h~~~v~~l~~s~d~ 556 (583)
+|+.+++...... ..+.+...+|+|-.
T Consensus 400 vdl~~g~~~~Lt~-~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 400 ISLITKKTRKIVI-GSGEKRFPSWGAFP 426 (428)
T ss_pred EECCCCCEEEeec-CCCcccCceecCCC
Confidence 9998776544333 44567778888743
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.3e-11 Score=119.83 Aligned_cols=233 Identities=9% Similarity=0.048 Sum_probs=146.3
Q ss_pred CcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC---CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEe
Q psy14906 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD---NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY 303 (583)
Q Consensus 227 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 303 (583)
..|.++|..... ...+ ..+...+....|+|||++|+.+..+ ..|.+|++. ++.... +..+...+.+++|+
T Consensus 170 ~~l~~~d~~g~~-~~~l-~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~--~g~~~~---~~~~~~~~~~~~~s 242 (417)
T TIGR02800 170 YELQVADYDGAN-PQTI-TRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLA--TGQREK---VASFPGMNGAPAFS 242 (417)
T ss_pred ceEEEEcCCCCC-CEEe-ecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECC--CCCEEE---eecCCCCccceEEC
Confidence 357788875433 3334 3456678899999999999887654 478888654 222222 23344556778999
Q ss_pred eCCCCEEEE-eeCCC--cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEE
Q psy14906 304 GNSSDNILS-AAGDS--TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAI 380 (583)
Q Consensus 304 ~~~~~~l~~-~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (583)
| |++.|+. .+.++ .|++||+.++...+...
T Consensus 243 p-Dg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~~---------------------------------------------- 275 (417)
T TIGR02800 243 P-DGSKLAVSLSKDGNPDIYVMDLDGKQLTRLTN---------------------------------------------- 275 (417)
T ss_pred C-CCCEEEEEECCCCCccEEEEECCCCCEEECCC----------------------------------------------
Confidence 8 7776654 44444 47777776543211100
Q ss_pred ecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC-c--eEEEEEcccCccccccCCCCCCC
Q psy14906 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS-G--HVDRFNIQSGAHRGSYGHDNQPG 457 (583)
Q Consensus 381 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-g--~i~i~d~~~~~~~~~~~~~~~~~ 457 (583)
+........|+|||+.|+..+.. + .|+++|+.+++.. .+ ..
T Consensus 276 ------------------------------~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~-~l-----~~ 319 (417)
T TIGR02800 276 ------------------------------GPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR-RL-----TF 319 (417)
T ss_pred ------------------------------CCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE-Ee-----ec
Confidence 00123356789999988776543 3 6888888766543 22 23
Q ss_pred cccCeeEEEEeCCCcEEEEeecCC---cEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCc---eEEEEEc
Q psy14906 458 HVGGVRGVVSDNLNQIVISGGNDQ---TVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDF---TVNIIDI 531 (583)
Q Consensus 458 h~~~v~~~~~s~~~~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~i~d~ 531 (583)
+...+..+.|+|++++++.++.++ .|.+||+.++ .. ..+..........|+|||++|+..+.++ .+++.+.
T Consensus 320 ~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~--~~-~~l~~~~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~~ 396 (417)
T TIGR02800 320 RGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGG--GE-RVLTDTGLDESPSFAPNGRMILYATTRGGRGVLGLVST 396 (417)
T ss_pred CCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCC--Ce-EEccCCCCCCCceECCCCCEEEEEEeCCCcEEEEEEEC
Confidence 455677889999999998888765 7888898775 33 2333233345668999999888877654 4555554
Q ss_pred cccceEEeecccccceeeEEec
Q psy14906 532 DTCTIIRKLSGHMGQLTDADFS 553 (583)
Q Consensus 532 ~~~~~~~~~~~h~~~v~~l~~s 553 (583)
. ++....+..+.+.+..++|+
T Consensus 397 ~-g~~~~~~~~~~g~~~~~~ws 417 (417)
T TIGR02800 397 D-GRFRARLPLGNGDVREPAWS 417 (417)
T ss_pred C-CceeeECCCCCCCcCCCCCC
Confidence 4 44455555445555555553
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.9e-11 Score=117.73 Aligned_cols=235 Identities=9% Similarity=0.027 Sum_probs=141.5
Q ss_pred cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC-CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC
Q psy14906 228 HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306 (583)
Q Consensus 228 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 306 (583)
.+.++|...... +.+ ..+...+.+..|+|||+.|+..+. ++...||-++...+..+.+..+. .......|+| |
T Consensus 199 ~l~i~d~dG~~~-~~l-~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~---g~~~~~~wSP-D 272 (448)
T PRK04792 199 QLMIADYDGYNE-QML-LRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFP---GINGAPRFSP-D 272 (448)
T ss_pred EEEEEeCCCCCc-eEe-ecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCC---CCcCCeeECC-C
Confidence 567777754433 333 345678889999999998887654 34333443344333333333333 2345689998 7
Q ss_pred CCEEEE-eeCCCc--EEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecC
Q psy14906 307 SDNILS-AAGDST--LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTG 383 (583)
Q Consensus 307 ~~~l~~-~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (583)
++.|+. .+.+|. |+++|+.+++..+..
T Consensus 273 G~~La~~~~~~g~~~Iy~~dl~tg~~~~lt-------------------------------------------------- 302 (448)
T PRK04792 273 GKKLALVLSKDGQPEIYVVDIATKALTRIT-------------------------------------------------- 302 (448)
T ss_pred CCEEEEEEeCCCCeEEEEEECCCCCeEECc--------------------------------------------------
Confidence 887764 455664 666676554321100
Q ss_pred CceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec-C--ceEEEEEcccCccccccCCCCCCCccc
Q psy14906 384 KNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS-S--GHVDRFNIQSGAHRGSYGHDNQPGHVG 460 (583)
Q Consensus 384 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d--g~i~i~d~~~~~~~~~~~~~~~~~h~~ 460 (583)
.+.......+|+|||+.++..+. + ..|+++|+.+++..... .+..
T Consensus 303 --------------------------~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt------~~g~ 350 (448)
T PRK04792 303 --------------------------RHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLT------FEGE 350 (448)
T ss_pred --------------------------cCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEe------cCCC
Confidence 00023456789999998877654 3 35777787776643321 1122
Q ss_pred CeeEEEEeCCCcEEEEeec-CC--cEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCC-c--eEEEEEcccc
Q psy14906 461 GVRGVVSDNLNQIVISGGN-DQ--TVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDD-F--TVNIIDIDTC 534 (583)
Q Consensus 461 ~v~~~~~s~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g--~i~i~d~~~~ 534 (583)
.....+|+|||++|+..+. ++ .|.++|+.++ ... .+..........|+|||++|+....+ + .+++++. +|
T Consensus 351 ~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g--~~~-~lt~~~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~-~G 426 (448)
T PRK04792 351 QNLGGSITPDGRSMIMVNRTNGKFNIARQDLETG--AMQ-VLTSTRLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI-DG 426 (448)
T ss_pred CCcCeeECCCCCEEEEEEecCCceEEEEEECCCC--CeE-EccCCCCCCCceECCCCCEEEEEEecCCceEEEEEEC-CC
Confidence 2345789999998877654 34 3555677665 332 22222222345899999988776543 3 4777787 46
Q ss_pred ceEEeecccccceeeEEecC
Q psy14906 535 TIIRKLSGHMGQLTDADFSP 554 (583)
Q Consensus 535 ~~~~~~~~h~~~v~~l~~s~ 554 (583)
+....+..+.+.+...+|+|
T Consensus 427 ~~~~~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 427 RFKARLPAGQGEVKSPAWSP 446 (448)
T ss_pred CceEECcCCCCCcCCCccCC
Confidence 66667776667788888987
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.7e-11 Score=100.95 Aligned_cols=183 Identities=15% Similarity=0.092 Sum_probs=131.0
Q ss_pred CCcEEEEEcCCCcEEE--EeeccCCceEEecccCCcceEEEeeCC---CCC-EEEEEecCCeEEEEEccCCceeEEEecc
Q psy14906 130 ESNVKVWDIKAEETYL--ELSFDNDTFKIMGKRWNSCVNVLEPSP---VVD-IIGVGLSNKKIILHNILTDESLMEFIQT 203 (583)
Q Consensus 130 dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~s~---~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~ 203 (583)
-|.+.++++...+... ++.- .....+..|.|.. +|. .|+-+..+|.|.++.....+....+++-
T Consensus 45 ~Gkl~Lys~~d~~~~~l~~~q~----------~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~l 114 (339)
T KOG0280|consen 45 SGKLHLYSLEDMKLSPLDTLQC----------TDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGL 114 (339)
T ss_pred ccceEEEeecccccCccceeee----------ecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeeccc
Confidence 3567777776644322 1110 2234555666653 444 5677788899999987765555555432
Q ss_pred C------CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeeh--hhhhhccccceEEEEEecC-CCEEEEEeCCCeEEE
Q psy14906 204 W------GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE--NQIKKAHRKVVTGAHFLYN-EPLLVTSSPDNTLKL 274 (583)
Q Consensus 204 ~------~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~~ 274 (583)
. ....++.|++.+. -++++..+|.+.+-+.....+. +.. +.|.-+.....|+.. .+++.+|+.|+.+..
T Consensus 115 s~~ki~~~~~lslD~~~~~~-~i~vs~s~G~~~~v~~t~~~le~vq~w-k~He~E~Wta~f~~~~pnlvytGgDD~~l~~ 192 (339)
T KOG0280|consen 115 SSKKISVVEALSLDISTSGT-KIFVSDSRGSISGVYETEMVLEKVQTW-KVHEFEAWTAKFSDKEPNLVYTGGDDGSLSC 192 (339)
T ss_pred chhhhhheeeeEEEeeccCc-eEEEEcCCCcEEEEecceeeeeecccc-cccceeeeeeecccCCCceEEecCCCceEEE
Confidence 1 1245778999888 6888888999996665555443 366 799999999999754 358899999999999
Q ss_pred EEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccc
Q psy14906 275 WIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 275 w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 326 (583)
||+..+ ........+.|...|.++.-+|+.+.++++|+.|..|++||.++
T Consensus 193 ~D~R~p--~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRn 242 (339)
T KOG0280|consen 193 WDIRIP--KTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRN 242 (339)
T ss_pred EEecCC--cceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhc
Confidence 987643 23333446678999999999998999999999999999999884
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=4e-11 Score=112.10 Aligned_cols=299 Identities=12% Similarity=0.098 Sum_probs=202.1
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc---------------eeEEEeccCCCeEEEEEecCCCCEEEEEc
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE---------------SLMEFIQTWGPVTALSFRTDGPPMMVSGS 224 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 224 (583)
.......|++|+....++|+|+.||.+++..+.+.. .-+++.+|.+.|..+.|+.+.+ -|-+..
T Consensus 12 PnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~Q-KLTtSD 90 (1189)
T KOG2041|consen 12 PNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQ-KLTTSD 90 (1189)
T ss_pred CCCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccc-cccccC
Confidence 445678999999999999999999999999886532 1245679999999999999887 788999
Q ss_pred CCCcEEEEeCCCCeehhhhhh-ccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEe
Q psy14906 225 NTGHLTVWNLEDRQVENQIKK-AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY 303 (583)
Q Consensus 225 ~dg~i~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 303 (583)
.+|.|.+|-+-.+.-...+.. ...+.|.+++|+.||..++..-.||.|.+=.++... ..-+.+++ .....+.|+
T Consensus 91 t~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNR---IwgKeLkg--~~l~hv~ws 165 (1189)
T KOG2041|consen 91 TSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNR---IWGKELKG--QLLAHVLWS 165 (1189)
T ss_pred CCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccce---ecchhcch--heccceeec
Confidence 999999999998877666532 245678999999999999999999988777654321 11112222 123468898
Q ss_pred eCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecC
Q psy14906 304 GNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTG 383 (583)
Q Consensus 304 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (583)
+ |.+.++.+-.+|.+.++|....-..+.- ..
T Consensus 166 ~-D~~~~Lf~~ange~hlydnqgnF~~Kl~-~~----------------------------------------------- 196 (1189)
T KOG2041|consen 166 E-DLEQALFKKANGETHLYDNQGNFERKLE-KD----------------------------------------------- 196 (1189)
T ss_pred c-cHHHHHhhhcCCcEEEecccccHHHhhh-hc-----------------------------------------------
Confidence 7 7778888888899999986543211100 00
Q ss_pred CceEEEeecCcccccceeeecccccccCCCCceE-EEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCe
Q psy14906 384 KNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTC-VYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGV 462 (583)
Q Consensus 384 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v 462 (583)
..++. -.++.-+..++. | -|. .+...
T Consensus 197 -----------------------------c~Vn~tg~~s~~~~kia~------i-~w~---------------~g~~~-- 223 (1189)
T KOG2041|consen 197 -----------------------------CEVNGTGIFSNFPTKIAE------I-EWN---------------TGPYQ-- 223 (1189)
T ss_pred -----------------------------eEEeeeeeecCCCccccc------e-eec---------------cCccc--
Confidence 00000 001111111100 0 000 01111
Q ss_pred eEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCC---------ceEEEEEccc
Q psy14906 463 RGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDD---------FTVNIIDIDT 533 (583)
Q Consensus 463 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------g~i~i~d~~~ 533 (583)
..-||...|+.+-.+|.+.|..-.+. ..-..+...-.+....|+++|..||+++.+ +.|.+|.. -
T Consensus 224 ---~v~pdrP~lavcy~nGr~QiMR~eND--~~Pvv~dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp-~ 297 (1189)
T KOG2041|consen 224 ---PVPPDRPRLAVCYANGRMQIMRSEND--PEPVVVDTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSP-Y 297 (1189)
T ss_pred ---cCCCCCCEEEEEEcCceehhhhhcCC--CCCeEEecccEeecceecCCCcEEEEccCcccccCccccceEEEecc-c
Confidence 11357788898989999988877665 444455555778999999999999998764 25666653 3
Q ss_pred cceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 534 ~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
|+.+..++.....|++++|-..|-.+|.+ .|+.|++=++
T Consensus 298 G~i~gtlkvpg~~It~lsWEg~gLriA~A-vdsfiyfanI 336 (1189)
T KOG2041|consen 298 GHIVGTLKVPGSCITGLSWEGTGLRIAIA-VDSFIYFANI 336 (1189)
T ss_pred hhheEEEecCCceeeeeEEcCCceEEEEE-ecceEEEEee
Confidence 77888888888899999997777666654 3555544333
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.8e-12 Score=129.15 Aligned_cols=188 Identities=12% Similarity=0.176 Sum_probs=145.9
Q ss_pred CEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEe
Q psy14906 122 PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI 201 (583)
Q Consensus 122 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 201 (583)
+.......++...-|..+.+..... .+-..|.++.-+|...+-++|+.||.+++|....++.+..++
T Consensus 2181 ~~~~~~n~~~~~~tq~~~~~~~~~k-------------~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~r 2247 (2439)
T KOG1064|consen 2181 NRFTPSNLPWLGSTQTSRGASVMIK-------------HPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFR 2247 (2439)
T ss_pred ccCCcccCCccccceecccceeEee-------------cccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEee
Confidence 3444444456666666554433322 345678888889999999999999999999999888888776
Q ss_pred --ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEe---CCCeEEEEE
Q psy14906 202 --QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS---PDNTLKLWI 276 (583)
Q Consensus 202 --~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~d~~i~~w~ 276 (583)
+. ..|+.+.|+.+|. -+..+..||.+.+|... .+..... +.|......+.|-. ..+++++ .++.+.+||
T Consensus 2248 t~g~-s~vtr~~f~~qGn-k~~i~d~dg~l~l~q~~-pk~~~s~-qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwD 2321 (2439)
T KOG1064|consen 2248 TAGN-SRVTRSRFNHQGN-KFGIVDGDGDLSLWQAS-PKPYTSW-QCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWD 2321 (2439)
T ss_pred ccCc-chhhhhhhcccCC-ceeeeccCCceeecccC-Ccceecc-ccCCccccceeeee--hhhhccccCCCCCcccchh
Confidence 44 8899999999998 68888889999999987 5566666 78999999999875 5677765 468899997
Q ss_pred ccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccccccee
Q psy14906 277 FDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKN 332 (583)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 332 (583)
..... ...++. ..|.+.++++++.| ..+.|++|+.+|.+++||++..+..+.
T Consensus 2322 tl~~~-~~s~v~--~~H~~gaT~l~~~P-~~qllisggr~G~v~l~D~rqrql~h~ 2373 (2439)
T KOG1064|consen 2322 TLLPP-MNSLVH--TCHDGGATVLAYAP-KHQLLISGGRKGEVCLFDIRQRQLRHT 2373 (2439)
T ss_pred cccCc-ccceee--eecCCCceEEEEcC-cceEEEecCCcCcEEEeehHHHHHHHH
Confidence 54432 223333 77999999999998 789999999999999999988766554
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.9e-10 Score=94.94 Aligned_cols=271 Identities=14% Similarity=0.200 Sum_probs=184.1
Q ss_pred CCeEEEEEccCCceeE--EEe-ccCCCeEEEEEec---CCCCEEEEEcCCCcEEEEeCCCCeehhhhhhcc------ccc
Q psy14906 183 NKKIILHNILTDESLM--EFI-QTWGPVTALSFRT---DGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAH------RKV 250 (583)
Q Consensus 183 d~~i~iw~~~~~~~~~--~~~-~~~~~v~~~~~~~---~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~------~~~ 250 (583)
.|.+.+|++...+... ++. .....+..+.|.- +|...++-+...|.|.++.....+....+ .+- ...
T Consensus 45 ~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L-~~ls~~ki~~~~ 123 (339)
T KOG0280|consen 45 SGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHL-RGLSSKKISVVE 123 (339)
T ss_pred ccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeee-cccchhhhhhee
Confidence 3567888877654433 111 2225666777753 34435677778899999977644332222 111 113
Q ss_pred eEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccc
Q psy14906 251 VTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330 (583)
Q Consensus 251 v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 330 (583)
..++.|++.+..++++..+|.+.+-+. .....+..+..+.|.-+.....|+..+.+.+++|+.|+.+..||++....
T Consensus 124 ~lslD~~~~~~~i~vs~s~G~~~~v~~--t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~- 200 (339)
T KOG0280|consen 124 ALSLDISTSGTKIFVSDSRGSISGVYE--TEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKT- 200 (339)
T ss_pred eeEEEeeccCceEEEEcCCCcEEEEec--ceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcc-
Confidence 457889999999999999999885532 22233444578899999999999877778999999999999999863210
Q ss_pred eeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccccccc
Q psy14906 331 KNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQA 410 (583)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 410 (583)
T Consensus 201 -------------------------------------------------------------------------------- 200 (339)
T KOG0280|consen 201 -------------------------------------------------------------------------------- 200 (339)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC-CCcEEEEeecCCcEEEEEcc
Q psy14906 411 KQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN-LNQIVISGGNDQTVKVWHFK 489 (583)
Q Consensus 411 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~ 489 (583)
.+|.- . ..|...|.+|.-+| .+.++++|+.|-.|++||.+
T Consensus 201 --------------------------~i~~n--------~-----kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtR 241 (339)
T KOG0280|consen 201 --------------------------FIWHN--------S-----KVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTR 241 (339)
T ss_pred --------------------------eeeec--------c-----eeeecceEEEecCCCCCceEEEeccccceeeeehh
Confidence 01110 0 46788888888776 56799999999999999999
Q ss_pred CCCCCceEEeeccCCeeeEEeccCCc--EEEEEeCCceEEEEEcccc--c---eEEeecccccceeeEEecCCCcEEEEE
Q psy14906 490 QTGKPPLRSIKLDNGISFFRTHQESS--MLAVCLDDFTVNIIDIDTC--T---IIRKLSGHMGQLTDADFSPDSRWLITA 562 (583)
Q Consensus 490 ~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~i~i~d~~~~--~---~~~~~~~h~~~v~~l~~s~d~~~l~s~ 562 (583)
+.. +++..-...+.|..+..+|.-. +|+++-.+| .+|-+.+.+ + .+...+.|.+-...-.|.....+|||+
T Consensus 242 nm~-kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATC 319 (339)
T KOG0280|consen 242 NMG-KPLFKAKVGGGVWRIKHHPEIFHRLLAACMHNG-AKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATC 319 (339)
T ss_pred ccc-CccccCccccceEEEEecchhhhHHHHHHHhcC-ceEEEecccccchheeeeccccccceeeccccccccceeeee
Confidence 654 6777767778999999998543 455555544 566666543 2 334556677777777785555678886
Q ss_pred e-CCCeEE-EEeCCCccc
Q psy14906 563 S-MDCTIR-VWDIPSSQL 578 (583)
Q Consensus 563 ~-~d~~i~-vw~~~~~~~ 578 (583)
+ .|+.++ +|-.-+++.
T Consensus 320 sFYDk~~~~~Wl~~t~~~ 337 (339)
T KOG0280|consen 320 SFYDKKIRQLWLHITGEP 337 (339)
T ss_pred eccccceeeeeeeccCCc
Confidence 5 677755 898777764
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.2e-11 Score=115.87 Aligned_cols=291 Identities=20% Similarity=0.255 Sum_probs=199.0
Q ss_pred EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC-eehhhhhhcc--ccceEEEEEecCCC--EEEEEeCCCeEEE
Q psy14906 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR-QVENQIKKAH--RKVVTGAHFLYNEP--LLVTSSPDNTLKL 274 (583)
Q Consensus 200 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~--~~~v~~~~~~~~~~--~l~s~~~d~~i~~ 274 (583)
+... +++.++..+|.|+ -++.++.-| +.+-|+... .+..-+ .| .-.|-.+.|+|... +-++......-.+
T Consensus 21 l~v~-~~~~a~si~p~gr-di~lAsr~g-l~i~dld~p~~ppr~l--~h~tpw~vad~qws~h~a~~~wiVsts~qkaii 95 (1081)
T KOG0309|consen 21 LKVD-GGFNAVSINPSGR-DIVLASRQG-LYIIDLDDPFTPPRWL--HHITPWQVADVQWSPHPAKPYWIVSTSNQKAII 95 (1081)
T ss_pred EEec-Ccccceeeccccc-hhhhhhhcC-eEEEeccCCCCCceee--eccCcchhcceecccCCCCceeEEecCcchhhh
Confidence 3334 6788999999998 567777655 666677653 322222 23 23566778887532 3333334455678
Q ss_pred EEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcccc
Q psy14906 275 WIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNE 354 (583)
Q Consensus 275 w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (583)
|++.... ....-..+.+|...|+.+.|.|.....+++++-|-.+..||++.....
T Consensus 96 wnlA~ss-~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p------------------------ 150 (1081)
T KOG0309|consen 96 WNLAKSS-SNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRP------------------------ 150 (1081)
T ss_pred hhhhcCC-ccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcc------------------------
Confidence 9776543 344556678999999999999988899999999999999999875321
Q ss_pred ccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCc
Q psy14906 355 KFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434 (583)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 434 (583)
+..|+.-. ...+.+.|+-....+.+.+...
T Consensus 151 --------------------------------~ys~~~w~------------------s~asqVkwnyk~p~vlasshg~ 180 (1081)
T KOG0309|consen 151 --------------------------------FYSTSSWR------------------SAASQVKWNYKDPNVLASSHGN 180 (1081)
T ss_pred --------------------------------eeeeeccc------------------ccCceeeecccCcchhhhccCC
Confidence 11111110 3455667766555555666677
Q ss_pred eEEEEEcccCcc-ccccCCCCCCCcccCeeEEEEeCC-CcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEecc
Q psy14906 435 HVDRFNIQSGAH-RGSYGHDNQPGHVGGVRGVVSDNL-NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ 512 (583)
Q Consensus 435 ~i~i~d~~~~~~-~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~ 512 (583)
.|.+||.+.|.. +..+ ++|...|+.++|..- ...+.+++.|++|+.||.+....+..+......++..-++.|
T Consensus 181 ~i~vwd~r~gs~pl~s~-----K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~P 255 (1081)
T KOG0309|consen 181 DIFVWDLRKGSTPLCSL-----KGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLP 255 (1081)
T ss_pred ceEEEeccCCCcceEEe-----cccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccc
Confidence 799999987654 4444 678889999988653 346889999999999999887656667777777888888888
Q ss_pred CCcEEEE--EeCCceEEEEE---------ccc-cceEEeecccccceeeEEecCCC----------cEEEEEeCCCeEEE
Q psy14906 513 ESSMLAV--CLDDFTVNIID---------IDT-CTIIRKLSGHMGQLTDADFSPDS----------RWLITASMDCTIRV 570 (583)
Q Consensus 513 ~~~~l~~--~~~dg~i~i~d---------~~~-~~~~~~~~~h~~~v~~l~~s~d~----------~~l~s~~~d~~i~v 570 (583)
-|+-... .-.+..+.+++ ..+ .+++..+.||.+.|....|-..+ -.|+|-+.|.++++
T Consensus 256 fg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrl 335 (1081)
T KOG0309|consen 256 FGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRL 335 (1081)
T ss_pred cCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEe
Confidence 6653222 11122344433 332 35788999999999887774322 25999999999999
Q ss_pred EeCCC
Q psy14906 571 WDIPS 575 (583)
Q Consensus 571 w~~~~ 575 (583)
|-+.+
T Consensus 336 WpI~~ 340 (1081)
T KOG0309|consen 336 WPIDS 340 (1081)
T ss_pred eeccH
Confidence 99865
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.34 E-value=1.7e-09 Score=114.11 Aligned_cols=165 Identities=12% Similarity=0.143 Sum_probs=113.3
Q ss_pred CceEEEEcc-CCcEEEEEecCceEEEEEcccCccccccCC---CCCC------CcccCeeEEEEeCCCc-EEEEeecCCc
Q psy14906 414 KPTCVYITH-CGNFVLIGYSSGHVDRFNIQSGAHRGSYGH---DNQP------GHVGGVRGVVSDNLNQ-IVISGGNDQT 482 (583)
Q Consensus 414 ~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~------~h~~~v~~~~~s~~~~-~l~s~~~dg~ 482 (583)
....++++| ++..+++...++.|++||..++........ .... ..-.....++++|+++ ++++-..++.
T Consensus 684 ~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~ 763 (1057)
T PLN02919 684 SPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSS 763 (1057)
T ss_pred CCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCe
Confidence 456889999 456666667788999999876643211000 0000 1123466799999988 4455567789
Q ss_pred EEEEEccCCCCCceE-----------Eee---------ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeec-
Q psy14906 483 VKVWHFKQTGKPPLR-----------SIK---------LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLS- 541 (583)
Q Consensus 483 i~iwd~~~~~~~~~~-----------~~~---------~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~- 541 (583)
|++||+.++....+. .+. .......++++++|.++++-..+++|++||..++.......
T Consensus 764 Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~ 843 (1057)
T PLN02919 764 IRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGT 843 (1057)
T ss_pred EEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEecc
Confidence 999999875211110 000 01134688999999988888899999999998876543221
Q ss_pred ------------ccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccc
Q psy14906 542 ------------GHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578 (583)
Q Consensus 542 ------------~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~ 578 (583)
++-.....++++++|+.+++-+.++.|++||+.+++.
T Consensus 844 G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 844 GKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 1223577899999999888888999999999998875
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.4e-11 Score=105.91 Aligned_cols=164 Identities=15% Similarity=0.184 Sum_probs=120.7
Q ss_pred CceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEE---EeecCCcEEEEEccC
Q psy14906 414 KPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI---SGGNDQTVKVWHFKQ 490 (583)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~---s~~~dg~i~iwd~~~ 490 (583)
....+..++.++++|++..+....++++........+... ..-...-+++.|..+..... ..++...+.+|....
T Consensus 64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~--~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~ 141 (390)
T KOG3914|consen 64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDV--SCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADS 141 (390)
T ss_pred cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeE--eecccCcceeeeeeccceEEEEeecCCceeeeeecccc
Confidence 4556677889999999999988888887655431111000 11222334444444444333 344556677777666
Q ss_pred CCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEee-cccccceeeEEecCCCcEEEEEeCCCeEE
Q psy14906 491 TGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDCTIR 569 (583)
Q Consensus 491 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~h~~~v~~l~~s~d~~~l~s~~~d~~i~ 569 (583)
+ .+...+.|-+.++.++++||++++.++..|..|++-.......+..+ -||..-|..++.-++ ..|+++|.|++|+
T Consensus 142 ~--~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~-~~LlS~sGD~tlr 218 (390)
T KOG3914|consen 142 G--RCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDN-YLLLSGSGDKTLR 218 (390)
T ss_pred c--CcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccC-ceeeecCCCCcEE
Confidence 5 77777888889999999999999999999999999988766655544 479999999999755 4599999999999
Q ss_pred EEeCCCccccccc
Q psy14906 570 VWDIPSSQLIDCF 582 (583)
Q Consensus 570 vw~~~~~~~~~~~ 582 (583)
+||+.+|+++.++
T Consensus 219 ~Wd~~sgk~L~t~ 231 (390)
T KOG3914|consen 219 LWDITSGKLLDTC 231 (390)
T ss_pred EEecccCCccccc
Confidence 9999999999876
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=1e-11 Score=127.46 Aligned_cols=199 Identities=9% Similarity=0.149 Sum_probs=158.3
Q ss_pred ccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeE
Q psy14906 109 GHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKI 186 (583)
Q Consensus 109 ~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i 186 (583)
.+-..|.++ +|...+-++|+.||.+++|.+..++.+..... .....|+.+.|+.+|+.+.++..||.+
T Consensus 2206 ~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt----------~g~s~vtr~~f~~qGnk~~i~d~dg~l 2275 (2439)
T KOG1064|consen 2206 HPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRT----------AGNSRVTRSRFNHQGNKFGIVDGDGDL 2275 (2439)
T ss_pred cccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeec----------cCcchhhhhhhcccCCceeeeccCCce
Confidence 344556677 78888999999999999999999998887763 334899999999999999999999999
Q ss_pred EEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEc---CCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEE
Q psy14906 187 ILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS---NTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLL 263 (583)
Q Consensus 187 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 263 (583)
.+|... .++....+.|........|-.. ++++++ .++.+.+||..-.....-+...|.+.++++++.|..++|
T Consensus 2276 ~l~q~~-pk~~~s~qchnk~~~Df~Fi~s---~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qll 2351 (2439)
T KOG1064|consen 2276 SLWQAS-PKPYTSWQCHNKALSDFRFIGS---LLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLL 2351 (2439)
T ss_pred eecccC-CcceeccccCCccccceeeeeh---hhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEE
Confidence 999986 6777778888888888888773 567764 468899999754322222226899999999999999999
Q ss_pred EEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccc
Q psy14906 264 VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIA 336 (583)
Q Consensus 264 ~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 336 (583)
++||.+|.|++||+. ..++...++. +. ...++++++..|.++||++.....+..+...
T Consensus 2352 isggr~G~v~l~D~r----qrql~h~~~~---------~~--~~~~f~~~ss~g~ikIw~~s~~~ll~~~p~e 2409 (2439)
T KOG1064|consen 2352 ISGGRKGEVCLFDIR----QRQLRHTFQA---------LD--TREYFVTGSSEGNIKIWRLSEFGLLHTFPSE 2409 (2439)
T ss_pred EecCCcCcEEEeehH----HHHHHHHhhh---------hh--hhheeeccCcccceEEEEccccchhhcCchh
Confidence 999999999999775 2333333332 32 4678999999999999999988777766443
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=3.4e-11 Score=104.97 Aligned_cols=165 Identities=15% Similarity=0.209 Sum_probs=118.2
Q ss_pred ceEEEeeCCCCCEEEEEecCCeEEEEEccCCce----eEEEeccCCCeEEEEEecCCCCEEE--EEcCCCcEEEEeCCCC
Q psy14906 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDES----LMEFIQTWGPVTALSFRTDGPPMMV--SGSNTGHLTVWNLEDR 237 (583)
Q Consensus 164 ~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~--s~~~dg~i~vwd~~~~ 237 (583)
....+..++.+++||++..+....++++..... +..+... ..-+++.|..+....++ ..+....+.+|....+
T Consensus 64 a~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~-~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~ 142 (390)
T KOG3914|consen 64 APALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVP-KRPTAISFIREDTSVLVADKAGDVYSFDILSADSG 142 (390)
T ss_pred cccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEeecc-cCcceeeeeeccceEEEEeecCCceeeeeeccccc
Confidence 344566788899999998888877777654332 2222222 34455666555552222 2344555667766665
Q ss_pred eehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC
Q psy14906 238 QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS 317 (583)
Q Consensus 238 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 317 (583)
.+...+ ||-..++.++|+||+++++++..|..|++-.+.. ....-...-||...|..++.. +++.|++++.|+
T Consensus 143 ~~~~~l--GhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa---~f~IesfclGH~eFVS~isl~--~~~~LlS~sGD~ 215 (390)
T KOG3914|consen 143 RCEPIL--GHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPA---TFVIESFCLGHKEFVSTISLT--DNYLLLSGSGDK 215 (390)
T ss_pred Ccchhh--hhhhhhheeeecCCCCEEEEecCCceEEEEecCc---ccchhhhccccHhheeeeeec--cCceeeecCCCC
Confidence 555555 9999999999999999999999999999985542 222223456799999999997 567899999999
Q ss_pred cEEEEEccccccceeeccc
Q psy14906 318 TLRIFNTKSETSNKNLGIA 336 (583)
Q Consensus 318 ~i~iwd~~~~~~~~~~~~~ 336 (583)
++++||+.+++.+..+...
T Consensus 216 tlr~Wd~~sgk~L~t~dl~ 234 (390)
T KOG3914|consen 216 TLRLWDITSGKLLDTCDLS 234 (390)
T ss_pred cEEEEecccCCcccccchh
Confidence 9999999999988766443
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.30 E-value=4.8e-09 Score=110.80 Aligned_cols=260 Identities=12% Similarity=0.110 Sum_probs=161.2
Q ss_pred EEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhh-c------------cccceEEEEEecCCCEEEEEeC-CCeEE
Q psy14906 208 TALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKK-A------------HRKVVTGAHFLYNEPLLVTSSP-DNTLK 273 (583)
Q Consensus 208 ~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~------------~~~~v~~~~~~~~~~~l~s~~~-d~~i~ 273 (583)
..+++++++..++++-..++.|++||.... .+..+.. + +-.....+++.++++.|+.+.. .+.|+
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~-~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir 649 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGN-FIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR 649 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCCC-EEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence 467888754437788788899999998643 3322211 1 1124578999998887666554 46788
Q ss_pred EEEccCCCCCceeeEEeccC-----------------CCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccc
Q psy14906 274 LWIFDKADGNGRLLRIREGH-----------------SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIA 336 (583)
Q Consensus 274 ~w~~~~~~~~~~~~~~~~~~-----------------~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 336 (583)
.+|+.. ..+.++.+- -.....++++|.++..+++...++.|++||..++......+
T Consensus 650 ~id~~~-----~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G-- 722 (1057)
T PLN02919 650 EIDFVN-----ETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSG-- 722 (1057)
T ss_pred EEecCC-----CEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEec--
Confidence 886532 122222110 12346789997566677777788999999987653211000
Q ss_pred hhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCce
Q psy14906 337 SANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT 416 (583)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 416 (583)
++.....+-... .........
T Consensus 723 -----------------------------------------------~G~~~~~~g~~~------------~~~~~~~P~ 743 (1057)
T PLN02919 723 -----------------------------------------------DGYERNLNGSSG------------TSTSFAQPS 743 (1057)
T ss_pred -----------------------------------------------CCccccCCCCcc------------ccccccCcc
Confidence 000000000000 000013577
Q ss_pred EEEEccCCcEEE-EEecCceEEEEEcccCccccccC------C--CCCC--------CcccCeeEEEEeCCCcEEEEeec
Q psy14906 417 CVYITHCGNFVL-IGYSSGHVDRFNIQSGAHRGSYG------H--DNQP--------GHVGGVRGVVSDNLNQIVISGGN 479 (583)
Q Consensus 417 ~~~~s~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~------~--~~~~--------~h~~~v~~~~~s~~~~~l~s~~~ 479 (583)
.++++|+++.|+ +...++.|++||+.++....... . ..+. ..-....+++++++|+++++-..
T Consensus 744 GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~ 823 (1057)
T PLN02919 744 GISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSY 823 (1057)
T ss_pred EEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECC
Confidence 899999998554 55567899999988765321100 0 0000 01123468999999998888889
Q ss_pred CCcEEEEEccCCCCCceEEeec--------------cCCeeeEEeccCCcEEEEEeCCceEEEEEccccce
Q psy14906 480 DQTVKVWHFKQTGKPPLRSIKL--------------DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI 536 (583)
Q Consensus 480 dg~i~iwd~~~~~~~~~~~~~~--------------~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 536 (583)
++.|++||..++ ........ -.....++++++|+++++-+.++.|++||+.+++.
T Consensus 824 N~rIrviD~~tg--~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 824 NHKIKKLDPATK--RVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CCEEEEEECCCC--eEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 999999999876 43322211 12567899999999888888999999999988764
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.1e-11 Score=110.56 Aligned_cols=238 Identities=16% Similarity=0.239 Sum_probs=163.8
Q ss_pred eecCCCCCCeEEEEe---eCeEEEEEcCCeEEEEecc--------ceeeeeecccCccEEEE--ccCCCEEEEEeCCCcE
Q psy14906 67 SVSPQHEDDITCLSS---DFFHIYTSANNIIYAWRRG--------IDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNV 133 (583)
Q Consensus 67 ~~~~~h~~~v~~~~~---~~~~~~~~~~~~i~vw~~~--------~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i 133 (583)
..+.||...|.+++. .+.+++++.|++|++|.+. ..+..+++.|+.+|..+ -.+-++++++ ||-|
T Consensus 729 ~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D~gi 806 (1034)
T KOG4190|consen 729 CNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--DGGI 806 (1034)
T ss_pred ecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--cCcc
Confidence 456789999988775 3479999999999999963 23677889999999997 6777888875 7899
Q ss_pred EEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEE-ecCCeEEEEEccCCceeEEEe-----ccCCCe
Q psy14906 134 KVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG-LSNKKIILHNILTDESLMEFI-----QTWGPV 207 (583)
Q Consensus 134 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~-----~~~~~v 207 (583)
.+||.--|+.+......+.. +..+.|.|+. +-+...+..| +...+++++|.+.++-..+++ +..+-+
T Consensus 807 HlWDPFigr~Laq~~dapk~------~a~~~ikcl~-nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~ 879 (1034)
T KOG4190|consen 807 HLWDPFIGRLLAQMEDAPKE------GAGGNIKCLE-NVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALT 879 (1034)
T ss_pred eeecccccchhHhhhcCccc------CCCceeEecc-cCcchheeeeccchhhheeeecccccceeeEEeccCCCCchhe
Confidence 99998877776644322211 2233444443 2244455444 778899999999888777765 445678
Q ss_pred EEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEE-EEccCCCCCcee
Q psy14906 208 TALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKL-WIFDKADGNGRL 286 (583)
Q Consensus 208 ~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~-w~~~~~~~~~~~ 286 (583)
.+++..+.|+ .++.+-.+|.|.+.|.++|+.+..+ +.-......++ .|..+.|+....|.++.+ | ... .+..
T Consensus 880 R~iaVa~~GN-~lAa~LSnGci~~LDaR~G~vINsw-rpmecdllqla-apsdq~L~~saldHslaVnW--hal--dgim 952 (1034)
T KOG4190|consen 880 RAIAVADKGN-KLAAALSNGCIAILDARNGKVINSW-RPMECDLLQLA-APSDQALAQSALDHSLAVNW--HAL--DGIM 952 (1034)
T ss_pred eEEEeccCcc-hhhHHhcCCcEEEEecCCCceeccC-Ccccchhhhhc-CchhHHHHhhcccceeEeee--hhc--CCee
Confidence 9999999999 7899999999999999999988877 44444444444 355667777778888888 8 322 2233
Q ss_pred eEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEE
Q psy14906 287 LRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323 (583)
Q Consensus 287 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd 323 (583)
....+....+.. |...-|.-|+++.....+.+|.
T Consensus 953 h~q~kpppepah---flqsvgpSLV~a~~Gn~lgVYa 986 (1034)
T KOG4190|consen 953 HLQDKPPPEPAH---FLQSVGPSLVTAQNGNILGVYA 986 (1034)
T ss_pred eeccCCCCcchh---hhhccCceeEEeccCcEEEEEe
Confidence 222222222222 2212345667766666666764
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.4e-11 Score=99.93 Aligned_cols=262 Identities=12% Similarity=0.190 Sum_probs=174.4
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc-----eeEEEeccC------------CCeEEEEEecCC-CCEEE
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE-----SLMEFIQTW------------GPVTALSFRTDG-PPMMV 221 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~------------~~v~~~~~~~~~-~~~l~ 221 (583)
.....|+++.|...|.+|++|...|.|.++.-.... ....|++|. ..|..+.|..++ +..++
T Consensus 24 tead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFL 103 (460)
T COG5170 24 TEADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFL 103 (460)
T ss_pred cccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEE
Confidence 345789999999999999999999999999754322 222344442 457888887654 44667
Q ss_pred EEcCCCcEEEEeCCCCee------------------------------------------hhhhhhccccceEEEEEecC
Q psy14906 222 SGSNTGHLTVWNLEDRQV------------------------------------------ENQIKKAHRKVVTGAHFLYN 259 (583)
Q Consensus 222 s~~~dg~i~vwd~~~~~~------------------------------------------~~~~~~~~~~~v~~~~~~~~ 259 (583)
..+.|.+|++|.+....+ .+.....|...|.++.|..|
T Consensus 104 lstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD 183 (460)
T COG5170 104 LSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSD 183 (460)
T ss_pred EecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCc
Confidence 777899999998754310 00011456777889999999
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC-----CCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeec
Q psy14906 260 EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH-----SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLG 334 (583)
Q Consensus 260 ~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 334 (583)
...++++. |-.|.+|+++..++....+.. +.| ..-|++..|+|.....+...+..|.|++-|++......
T Consensus 184 ~et~lSaD-dLrINLWnl~i~D~sFnIVDi-KP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcd--- 258 (460)
T COG5170 184 KETLLSAD-DLRINLWNLEIIDGSFNIVDI-KPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCD--- 258 (460)
T ss_pred hheeeecc-ceeeeeccccccCCceEEEec-cCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhcc---
Confidence 88888774 778999988776654444332 223 34578888998777777788888999999987532110
Q ss_pred cchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCC
Q psy14906 335 IASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSK 414 (583)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (583)
T Consensus 259 -------------------------------------------------------------------------------- 258 (460)
T COG5170 259 -------------------------------------------------------------------------------- 258 (460)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCC
Q psy14906 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP 494 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 494 (583)
.+. .+..-..|+ ....-+ .+-...|..+.|+++|+++++-+. -+|+|||..... .
T Consensus 259 ------n~~--klfe~~~D~----------v~~~ff-----~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k-~ 313 (460)
T COG5170 259 ------NSK--KLFELTIDG----------VDVDFF-----EEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAK-N 313 (460)
T ss_pred ------Cch--hhhhhccCc----------ccchhH-----HHHhhhhcceEEcCCCcEEEEecc-ceEEEEeccccc-C
Confidence 000 000000010 000011 344567889999999999988765 589999998764 5
Q ss_pred ceEEeecc-------------CC---eeeEEeccCCcEEEEEeCCceEEEEEc
Q psy14906 495 PLRSIKLD-------------NG---ISFFRTHQESSMLAVCLDDFTVNIIDI 531 (583)
Q Consensus 495 ~~~~~~~~-------------~~---v~~~~~s~~~~~l~~~~~dg~i~i~d~ 531 (583)
++.++..+ .. -..+.||.|.+.+.+|+..+..-+|-.
T Consensus 314 pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~ 366 (460)
T COG5170 314 PIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPT 366 (460)
T ss_pred CceeechHHHHHHHHHhhhhccceeeeEEEEecCCcccccccccccceeeecc
Confidence 66665322 12 234688889999999988887777764
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.6e-11 Score=111.22 Aligned_cols=251 Identities=13% Similarity=0.117 Sum_probs=174.1
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC---ceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN---GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD 316 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 316 (583)
++.+ .+|+..|..++-..+.+-+++++.|.+|++|.+..+... ..+..++..|..+|.++.|.. +-+.++++ |
T Consensus 728 L~nf-~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~-~lr~i~Sc--D 803 (1034)
T KOG4190|consen 728 LCNF-TGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLA-DLRSIASC--D 803 (1034)
T ss_pred eecc-cCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeee-ccceeeec--c
Confidence 4455 789999998888888889999999999999988654322 236677889999999999985 66666654 7
Q ss_pred CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccc
Q psy14906 317 STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSK 396 (583)
Q Consensus 317 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 396 (583)
|.|.+||.--++....+.. +...
T Consensus 804 ~giHlWDPFigr~Laq~~d-------------------------------------------------------apk~-- 826 (1034)
T KOG4190|consen 804 GGIHLWDPFIGRLLAQMED-------------------------------------------------------APKE-- 826 (1034)
T ss_pred CcceeecccccchhHhhhc-------------------------------------------------------Cccc--
Confidence 8999999876655432210 0000
Q ss_pred ccceeeecccccccCCCCceEEEEcc--CCcEEEEE-ecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcE
Q psy14906 397 MDDMFLVPERCKQAKQSKPTCVYITH--CGNFVLIG-YSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQI 473 (583)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 473 (583)
+....+..-+ +...+++| +...+|+++|.+.++....+...+..+....+++++..+.|++
T Consensus 827 ----------------~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~ 890 (1034)
T KOG4190|consen 827 ----------------GAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNK 890 (1034)
T ss_pred ----------------CCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcch
Confidence 1222222222 33344444 6788999999999888777765555677788999999999999
Q ss_pred EEEeecCCcEEEEEccCCCCCceEEeeccC-CeeeEEeccCCcEEEEEeCCceEEE-EEccccceEEeecccccceeeEE
Q psy14906 474 VISGGNDQTVKVWHFKQTGKPPLRSIKLDN-GISFFRTHQESSMLAVCLDDFTVNI-IDIDTCTIIRKLSGHMGQLTDAD 551 (583)
Q Consensus 474 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg~i~i-~d~~~~~~~~~~~~h~~~v~~l~ 551 (583)
++.+-.+|.|.+.|.+++ +.+...+... ....++ .|..+.|+....|.++.+ |..-.+....+.+....+..-+
T Consensus 891 lAa~LSnGci~~LDaR~G--~vINswrpmecdllqla-apsdq~L~~saldHslaVnWhaldgimh~q~kpppepahfl- 966 (1034)
T KOG4190|consen 891 LAAALSNGCIAILDARNG--KVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDGIMHLQDKPPPEPAHFL- 966 (1034)
T ss_pred hhHHhcCCcEEEEecCCC--ceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCCeeeeccCCCCcchhhh-
Confidence 999999999999999998 6655444322 122222 356677887788888888 9887777666655433332211
Q ss_pred ecCCCcEEEEEeCCCeEEEEe
Q psy14906 552 FSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 552 ~s~d~~~l~s~~~d~~i~vw~ 572 (583)
-.-|.-|+++...+.+.||.
T Consensus 967 -qsvgpSLV~a~~Gn~lgVYa 986 (1034)
T KOG4190|consen 967 -QSVGPSLVTAQNGNILGVYA 986 (1034)
T ss_pred -hccCceeEEeccCcEEEEEe
Confidence 11355677776666677774
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.4e-08 Score=97.16 Aligned_cols=311 Identities=12% Similarity=0.073 Sum_probs=178.8
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceE-EEeeCCCCCEEEEEecCCeEEEEEccCCceeE
Q psy14906 120 FGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVN-VLEPSPVVDIIGVGLSNKKIILHNILTDESLM 198 (583)
Q Consensus 120 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~ 198 (583)
.+..++.++.+|.+.-+|.++|+.+.+..+....... .......+. .+.. ++..+.+++.++.+..+|.++|+.+.
T Consensus 68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~-~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~~W 144 (394)
T PRK11138 68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWF-SKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEVAW 144 (394)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCccccc-ccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCCcc
Confidence 4667777788899999999999998887653210000 000000000 0111 35677788889999999999999998
Q ss_pred EEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhcccc----ceEEEEEecCCCEEEEEeCCCeEEE
Q psy14906 199 EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRK----VVTGAHFLYNEPLLVTSSPDNTLKL 274 (583)
Q Consensus 199 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~s~~~d~~i~~ 274 (583)
+.... +.+.+--.-.++ .++.+..++.+..+|.++|+.+......... ...+.... +..++.++.++.+..
T Consensus 145 ~~~~~-~~~~ssP~v~~~--~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~--~~~v~~~~~~g~v~a 219 (394)
T PRK11138 145 QTKVA-GEALSRPVVSDG--LVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATA--FGGAIVGGDNGRVSA 219 (394)
T ss_pred cccCC-CceecCCEEECC--EEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEE--CCEEEEEcCCCEEEE
Confidence 87755 333221111234 5777888999999999999987766211110 00111111 234566667887777
Q ss_pred EEccCCCCCceeeEEec--cCC--CC---CeeEEEee-CCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhh
Q psy14906 275 WIFDKADGNGRLLRIRE--GHS--AP---PNYIQFYG-NSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRK 346 (583)
Q Consensus 275 w~~~~~~~~~~~~~~~~--~~~--~~---v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 346 (583)
.+.. + ++.+.... ... .. ...+..+| -.+..++.++.+|.+..+|..+++..
T Consensus 220 ~d~~--~--G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~---------------- 279 (394)
T PRK11138 220 VLME--Q--GQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIV---------------- 279 (394)
T ss_pred EEcc--C--ChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEE----------------
Confidence 7443 2 22221111 000 00 00010111 02456777778889998888876532
Q ss_pred cchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcE
Q psy14906 347 NRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNF 426 (583)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 426 (583)
|..... ....+ ..++..
T Consensus 280 -------------------------------------------W~~~~~------------------~~~~~--~~~~~~ 296 (394)
T PRK11138 280 -------------------------------------------WKREYG------------------SVNDF--AVDGGR 296 (394)
T ss_pred -------------------------------------------EeecCC------------------CccCc--EEECCE
Confidence 221100 00011 124567
Q ss_pred EEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc-CCe
Q psy14906 427 VLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGI 505 (583)
Q Consensus 427 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v 505 (583)
+++++.+|.+..+|..+++.+...... .+ ....+... .+..|+.++.||.+...|..++ +.+...+.. ..+
T Consensus 297 vy~~~~~g~l~ald~~tG~~~W~~~~~---~~-~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG--~~~~~~~~~~~~~ 368 (394)
T PRK11138 297 IYLVDQNDRVYALDTRGGVELWSQSDL---LH-RLLTAPVL--YNGYLVVGDSEGYLHWINREDG--RFVAQQKVDSSGF 368 (394)
T ss_pred EEEEcCCCeEEEEECCCCcEEEccccc---CC-CcccCCEE--ECCEEEEEeCCCEEEEEECCCC--CEEEEEEcCCCcc
Confidence 778888999999999988876544211 11 11222222 2456778889999999999998 777666543 222
Q ss_pred ee-EEeccCCcEEEEEeCCceEEEEEc
Q psy14906 506 SF-FRTHQESSMLAVCLDDFTVNIIDI 531 (583)
Q Consensus 506 ~~-~~~s~~~~~l~~~~~dg~i~i~d~ 531 (583)
.+ ..+ .+..|++++.||.++.++.
T Consensus 369 ~s~P~~--~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 369 LSEPVV--ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred eeCCEE--ECCEEEEEeCCceEEEEeC
Confidence 22 122 3457888899999888764
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.1e-08 Score=95.87 Aligned_cols=304 Identities=11% Similarity=0.029 Sum_probs=177.8
Q ss_pred CCCEEEEEecCCeEEEEEccCCceeEEEeccCC----------CeE-EEEEecCCCCEEEEEcCCCcEEEEeCCCCeehh
Q psy14906 173 VVDIIGVGLSNKKIILHNILTDESLMEFIQTWG----------PVT-ALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN 241 (583)
Q Consensus 173 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~----------~v~-~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 241 (583)
.+..+.+++.++.+.-+|.++|+.+.+...... .+. .+.. ++. .++.++.+|.+..+|.++|+.+.
T Consensus 68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~-~v~v~~~~g~l~ald~~tG~~~W 144 (394)
T PRK11138 68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGG-KVYIGSEKGQVYALNAEDGEVAW 144 (394)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECC-EEEEEcCCCEEEEEECCCCCCcc
Confidence 356777788889999999999999887654320 000 1111 233 57778889999999999999887
Q ss_pred hhhhccccceEE-EEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCC-----CeeEEEeeCCCCEEEEeeC
Q psy14906 242 QIKKAHRKVVTG-AHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP-----PNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 242 ~~~~~~~~~v~~-~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~l~~~~~ 315 (583)
+.. .. ..+.+ ... .+ ..++.+..++.+..+|.. +++.+-........ ..+-... +..++.++.
T Consensus 145 ~~~-~~-~~~~ssP~v-~~-~~v~v~~~~g~l~ald~~----tG~~~W~~~~~~~~~~~~~~~sP~v~---~~~v~~~~~ 213 (394)
T PRK11138 145 QTK-VA-GEALSRPVV-SD-GLVLVHTSNGMLQALNES----DGAVKWTVNLDVPSLTLRGESAPATA---FGGAIVGGD 213 (394)
T ss_pred ccc-CC-CceecCCEE-EC-CEEEEECCCCEEEEEEcc----CCCEeeeecCCCCcccccCCCCCEEE---CCEEEEEcC
Confidence 762 22 22222 112 13 456667778877777543 33444333221100 0111111 235677778
Q ss_pred CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcc
Q psy14906 316 DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKS 395 (583)
Q Consensus 316 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 395 (583)
+|.+..+|..+++..-........ ....+
T Consensus 214 ~g~v~a~d~~~G~~~W~~~~~~~~-------------------------------------------~~~~~-------- 242 (394)
T PRK11138 214 NGRVSAVLMEQGQLIWQQRISQPT-------------------------------------------GATEI-------- 242 (394)
T ss_pred CCEEEEEEccCChhhheeccccCC-------------------------------------------Cccch--------
Confidence 899999998887643221100000 00000
Q ss_pred cccceeeecccccccCCCCceEEEEcc--CCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcE
Q psy14906 396 KMDDMFLVPERCKQAKQSKPTCVYITH--CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQI 473 (583)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 473 (583)
.....+..+| .+..+++++.+|.+..+|..+|+.+..... + ....+.. .+..
T Consensus 243 -----------------~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~----~---~~~~~~~--~~~~ 296 (394)
T PRK11138 243 -----------------DRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREY----G---SVNDFAV--DGGR 296 (394)
T ss_pred -----------------hcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecC----C---CccCcEE--ECCE
Confidence 0000001111 245677777889999999999987665421 1 1112222 4556
Q ss_pred EEEeecCCcEEEEEccCCCCCceEEeec-c-CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceee-E
Q psy14906 474 VISGGNDQTVKVWHFKQTGKPPLRSIKL-D-NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTD-A 550 (583)
Q Consensus 474 l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~-~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~-l 550 (583)
++.++.+|.+..+|..++ +.+..... . ....+... .+..|++++.+|.++.+|..+|+.+.+.+-....+.+ .
T Consensus 297 vy~~~~~g~l~ald~~tG--~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P 372 (394)
T PRK11138 297 IYLVDQNDRVYALDTRGG--VELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQKVDSSGFLSEP 372 (394)
T ss_pred EEEEcCCCeEEEEECCCC--cEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCcceeCC
Confidence 777788999999999887 55543321 1 11222222 2567788999999999999999998776643333322 2
Q ss_pred EecCCCcEEEEEeCCCeEEEEeC
Q psy14906 551 DFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 551 ~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
.+ .+..|+.++.||.|+.++.
T Consensus 373 ~~--~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 373 VV--ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred EE--ECCEEEEEeCCceEEEEeC
Confidence 22 2446788899999988764
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.7e-10 Score=99.31 Aligned_cols=286 Identities=12% Similarity=0.102 Sum_probs=185.3
Q ss_pred ccCccEEEE-ccCCCEEEEEeCCCcEEEEEcCCCc---EEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec-C
Q psy14906 109 GHTSPVHLI-LPFGPHLISVDEESNVKVWDIKAEE---TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS-N 183 (583)
Q Consensus 109 ~h~~~v~~i-s~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d 183 (583)
-|.+.|+.+ ..-.+++.+++.||.++.|.-..-. .+..+. .|...|.+++.+-++.++++.+. |
T Consensus 7 mhrd~i~hv~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFr-----------aHL~~I~sl~~S~dg~L~~Sv~d~D 75 (558)
T KOG0882|consen 7 MHRDVITHVFPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFR-----------AHLGVILSLAVSYDGWLFRSVEDPD 75 (558)
T ss_pred cccceeeeEeeehhheEEeeecchhhhhcCCCCccceeehhhhH-----------HHHHHHHhhhccccceeEeeccCcc
Confidence 477778877 4456899999999999999855412 222222 78899999999999999999777 9
Q ss_pred CeEEEEEccCCceeEEEeccCCCeEEEEE-ecCC-C--CEEEEEcCCCcEEEEeCCCCe-ehhhhhhccccceEEEEEec
Q psy14906 184 KKIILHNILTDESLMEFIQTWGPVTALSF-RTDG-P--PMMVSGSNTGHLTVWNLEDRQ-VENQIKKAHRKVVTGAHFLY 258 (583)
Q Consensus 184 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~-~~~~-~--~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~v~~~~~~~ 258 (583)
..++++|+++-..+.-++.. .....+.| ...| . .+.++.-.++.+.++|-.... ....+..-|..+|..+.+++
T Consensus 76 hs~KvfDvEn~DminmiKL~-~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~q 154 (558)
T KOG0882|consen 76 HSVKVFDVENFDMINMIKLV-DLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQ 154 (558)
T ss_pred cceeEEEeeccchhhhcccc-cCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeec
Confidence 99999999876554333322 11112222 2222 1 133444567899999976543 33444466999999999999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCC--CCceee---------EEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccc
Q psy14906 259 NEPLLVTSSPDNTLKLWIFDKAD--GNGRLL---------RIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~w~~~~~~--~~~~~~---------~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
-+..+++....|.|.-|..+..- ...... ..+........++.|+| ++..+.+-+.|..|++++..++
T Consensus 155 a~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp-~g~qistl~~DrkVR~F~~KtG 233 (558)
T KOG0882|consen 155 AGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSP-DGAQISTLNPDRKVRGFVFKTG 233 (558)
T ss_pred cccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEcc-ccCcccccCcccEEEEEEeccc
Confidence 99999999999999999654210 000011 11122345678999998 8999999999999999999999
Q ss_pred ccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccc
Q psy14906 328 TSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERC 407 (583)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 407 (583)
+..+.+...........+. + +.+..-..+.........
T Consensus 234 klvqeiDE~~t~~~~q~ks-------------~-----------------------------y~l~~VelgRRmaverel 271 (558)
T KOG0882|consen 234 KLVQEIDEVLTDAQYQPKS-------------P-----------------------------YGLMHVELGRRMAVEREL 271 (558)
T ss_pred hhhhhhhccchhhhhcccc-------------c-----------------------------cccceeehhhhhhHHhhH
Confidence 9887764322111000000 0 000000000000011111
Q ss_pred cccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcccccc
Q psy14906 408 KQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY 450 (583)
Q Consensus 408 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 450 (583)
.......-+.+.|...|++|+.|+--| |++.++.++...+.+
T Consensus 272 ek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~ 313 (558)
T KOG0882|consen 272 EKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRIL 313 (558)
T ss_pred hhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEe
Confidence 112224567889999999999999888 999999988876655
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=99.19 E-value=4.4e-08 Score=82.49 Aligned_cols=143 Identities=13% Similarity=0.118 Sum_probs=95.7
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCC--cEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCC
Q psy14906 117 ILPFGPHLISVDEESNVKVWDIKAE--ETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD 194 (583)
Q Consensus 117 is~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~ 194 (583)
++.+|+.||.. .|..|.|-..++. ..+.+..... .....=+.++||||+.+||.+...|+|+++|+. |
T Consensus 5 ~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpk--------D~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~-g 74 (282)
T PF15492_consen 5 LSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPK--------DPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLM-G 74 (282)
T ss_pred ecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCC--------CCCchheEEEECCCCcEEEEEcCCCeEEEEecc-c
Confidence 47888888886 4778888776652 2333433322 333455789999999999999999999999996 4
Q ss_pred ceeEEEecc-------CCCeEEEEEecCC-----CCEEEEEcCCCcEEEEeCCCC-----eehh--hhhhccccceEEEE
Q psy14906 195 ESLMEFIQT-------WGPVTALSFRTDG-----PPMMVSGSNTGHLTVWNLEDR-----QVEN--QIKKAHRKVVTGAH 255 (583)
Q Consensus 195 ~~~~~~~~~-------~~~v~~~~~~~~~-----~~~l~s~~~dg~i~vwd~~~~-----~~~~--~~~~~~~~~v~~~~ 255 (583)
..+..+... ...|..+.|.+.. .+.|++-..+|.++-|-+..+ +... .+...+...|.++.
T Consensus 75 ~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~v 154 (282)
T PF15492_consen 75 SELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAV 154 (282)
T ss_pred ceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEE
Confidence 555444422 2456777776543 224666677888887775322 2222 22123467899999
Q ss_pred EecCCCEEEEEeCC
Q psy14906 256 FLYNEPLLVTSSPD 269 (583)
Q Consensus 256 ~~~~~~~l~s~~~d 269 (583)
++|..++|+.||..
T Consensus 155 y~p~h~LLlVgG~~ 168 (282)
T PF15492_consen 155 YHPKHRLLLVGGCE 168 (282)
T ss_pred EcCCCCEEEEeccC
Confidence 99998988887743
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=99.16 E-value=9.7e-08 Score=80.48 Aligned_cols=40 Identities=23% Similarity=0.490 Sum_probs=35.6
Q ss_pred cccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 543 HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 543 h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
....|..+..||||+.||+...+|.|.+|++.+-++.+..
T Consensus 228 ~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W 267 (282)
T PF15492_consen 228 EQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSW 267 (282)
T ss_pred CCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhccc
Confidence 4577999999999999999999999999999987776654
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.2e-09 Score=96.78 Aligned_cols=254 Identities=13% Similarity=0.155 Sum_probs=175.7
Q ss_pred ccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCC-CCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC-CCcEEEEE
Q psy14906 246 AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD-GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFN 323 (583)
Q Consensus 246 ~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd 323 (583)
-|.+.|+.+... ..+++.+++.||.++.| .... .-...+..+..|...+.+++.+- ++..+.+.+. |..++++|
T Consensus 7 mhrd~i~hv~~t-ka~fiiqASlDGh~KFW--kKs~isGvEfVKhFraHL~~I~sl~~S~-dg~L~~Sv~d~Dhs~KvfD 82 (558)
T KOG0882|consen 7 MHRDVITHVFPT-KAKFIIQASLDGHKKFW--KKSRISGVEFVKHFRAHLGVILSLAVSY-DGWLFRSVEDPDHSVKVFD 82 (558)
T ss_pred cccceeeeEeee-hhheEEeeecchhhhhc--CCCCccceeehhhhHHHHHHHHhhhccc-cceeEeeccCcccceeEEE
Confidence 377777776554 46789999999999999 4332 12234456677888888988884 8888888777 99999999
Q ss_pred ccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeee
Q psy14906 324 TKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLV 403 (583)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 403 (583)
+++-.....+.. .++.
T Consensus 83 vEn~DminmiKL------------------------------------------------------~~lP---------- 98 (558)
T KOG0882|consen 83 VENFDMINMIKL------------------------------------------------------VDLP---------- 98 (558)
T ss_pred eeccchhhhccc------------------------------------------------------ccCC----------
Confidence 987554322111 0000
Q ss_pred cccccccCCCCceEEEEccCC--cEEEE-EecCceEEEEEcccCcc-ccccCCCCCCCcccCeeEEEEeCCCcEEEEeec
Q psy14906 404 PERCKQAKQSKPTCVYITHCG--NFVLI-GYSSGHVDRFNIQSGAH-RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN 479 (583)
Q Consensus 404 ~~~~~~~~~~~i~~~~~s~~~--~~l~~-~~~dg~i~i~d~~~~~~-~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 479 (583)
. ..+...+|.. ..+++ ...+|.+.++|-....+ ...+. .-|..+|.++.+.+-+..+++...
T Consensus 99 ---------g-~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fk----klH~sPV~~i~y~qa~Ds~vSiD~ 164 (558)
T KOG0882|consen 99 ---------G-FAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFK----KLHFSPVKKIRYNQAGDSAVSIDI 164 (558)
T ss_pred ---------C-ceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceec----ccccCceEEEEeeccccceeeccc
Confidence 0 0011111111 12333 34578899998765442 22222 579999999999999999999999
Q ss_pred CCcEEEEEccCCCC----CceEEe----------eccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeec----
Q psy14906 480 DQTVKVWHFKQTGK----PPLRSI----------KLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLS---- 541 (583)
Q Consensus 480 dg~i~iwd~~~~~~----~~~~~~----------~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---- 541 (583)
.|.|.-|..+...+ +....+ +......++.|+|+|..+++-..|..|+++++.+|++++.+.
T Consensus 165 ~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE~~t 244 (558)
T KOG0882|consen 165 SGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDEVLT 244 (558)
T ss_pred cceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhccch
Confidence 99999999874110 111122 223468899999999999999999999999999988655442
Q ss_pred ----------------------------ccc-cceeeEEecCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 542 ----------------------------GHM-GQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 542 ----------------------------~h~-~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
.|. ..-+.+.|...|++|+-++.=| |+|.++.++++.+.+
T Consensus 245 ~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~ 313 (558)
T KOG0882|consen 245 DAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRIL 313 (558)
T ss_pred hhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEe
Confidence 122 2245567888899999988776 899999999887754
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=5.9e-08 Score=92.21 Aligned_cols=149 Identities=7% Similarity=0.034 Sum_probs=96.0
Q ss_pred ceEEEEccCCcEEEEEec---CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec-CC--cEEEEEc
Q psy14906 415 PTCVYITHCGNFVLIGYS---SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN-DQ--TVKVWHF 488 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-dg--~i~iwd~ 488 (583)
.....|+|||+.++.... +..|+++|+.+++... + ..+........|+|||+.|+..+. .+ .|.+.|+
T Consensus 235 ~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~-L-----T~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl 308 (419)
T PRK04043 235 LVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQ-I-----TNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKL 308 (419)
T ss_pred EEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEE-c-----ccCCCccCccEECCCCCEEEEEECCCCCceEEEEEC
Confidence 445779999987766432 3578888987776443 3 223333345689999987766653 33 5777788
Q ss_pred cCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCC---------ceEEEEEccccceEEeecccccceeeEEecCCCcEE
Q psy14906 489 KQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDD---------FTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWL 559 (583)
Q Consensus 489 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l 559 (583)
.++ +..+...... ....|||||+.++..... ..|.+.|+++++.. .+... .......|+|||+.|
T Consensus 309 ~~g--~~~rlt~~g~--~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~-~LT~~-~~~~~p~~SPDG~~I 382 (419)
T PRK04043 309 NSG--SVEQVVFHGK--NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIR-RLTAN-GVNQFPRFSSDGGSI 382 (419)
T ss_pred CCC--CeEeCccCCC--cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeE-ECCCC-CCcCCeEECCCCCEE
Confidence 776 4433222221 124899999988876653 37888898887653 34332 234468999999988
Q ss_pred EEEeCC---CeEEEEeCCC
Q psy14906 560 ITASMD---CTIRVWDIPS 575 (583)
Q Consensus 560 ~s~~~d---~~i~vw~~~~ 575 (583)
+..+.+ ..+.+.+++.
T Consensus 383 ~f~~~~~~~~~L~~~~l~g 401 (419)
T PRK04043 383 MFIKYLGNQSALGIIRLNY 401 (419)
T ss_pred EEEEccCCcEEEEEEecCC
Confidence 766543 2466777754
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.2e-09 Score=102.78 Aligned_cols=296 Identities=14% Similarity=0.174 Sum_probs=193.0
Q ss_pred ccceeeeeeeeeeecCcccEEEEEeCCCceEEEEeeCCeEEEEecCC-cEEEeecCCCCC--CeEEEEe-----eCeEEE
Q psy14906 16 SKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNH-FKLLSVSPQHED--DITCLSS-----DFFHIY 87 (583)
Q Consensus 16 ~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~-~~~~~~~~~h~~--~v~~~~~-----~~~~~~ 87 (583)
|+.|. |.+.+..+.-..++...|.++. ++.++.--+.+.|+.. +..-+.+. |-. .|-...+ -+..++
T Consensus 12 s~tf~--kslsl~v~~~~~a~si~p~grd--i~lAsr~gl~i~dld~p~~ppr~l~-h~tpw~vad~qws~h~a~~~wiV 86 (1081)
T KOG0309|consen 12 SPTFG--KSLSLKVDGGFNAVSINPSGRD--IVLASRQGLYIIDLDDPFTPPRWLH-HITPWQVADVQWSPHPAKPYWIV 86 (1081)
T ss_pred CCccC--ceeEEEecCcccceeeccccch--hhhhhhcCeEEEeccCCCCCceeee-ccCcchhcceecccCCCCceeEE
Confidence 44555 5666566777788888999988 4444555566777765 22222221 211 1222222 235666
Q ss_pred EEcCCeEEEEec----cceeeeeecccCccEEEEc--cC-CCEEEEEeCCCcEEEEEcCCCc-EEEEeeccCCceEEecc
Q psy14906 88 TSANNIIYAWRR----GIDIVGTYKGHTSPVHLIL--PF-GPHLISVDEESNVKVWDIKAEE-TYLELSFDNDTFKIMGK 159 (583)
Q Consensus 88 ~~~~~~i~vw~~----~~~~~~~~~~h~~~v~~is--~~-~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~ 159 (583)
......-.+|++ +...-..+.||+..|+.+. |. -..|++++.|-.+..||+.+.. .+....
T Consensus 87 sts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~----------- 155 (1081)
T KOG0309|consen 87 STSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTS----------- 155 (1081)
T ss_pred ecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeee-----------
Confidence 666677778996 3455566789999999983 33 3589999999999999998854 444443
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCC-ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD-ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
.....-..++|+-....+.+.+....|++||.+.| .++..+++|...|+.++|..--...+.+.+.||+|+.||.+...
T Consensus 156 ~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt 235 (1081)
T KOG0309|consen 156 SWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKST 235 (1081)
T ss_pred cccccCceeeecccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccc
Confidence 55667788999875555555566678999999865 67788899999999999987644468999999999999987543
Q ss_pred ehhhhhhccccceEEEEEecCCCEEEE--EeCCCeEEEEEccCCC------CCceeeEEeccCCCCCeeEEEeeC-----
Q psy14906 239 VENQIKKAHRKVVTGAHFLYNEPLLVT--SSPDNTLKLWIFDKAD------GNGRLLRIREGHSAPPNYIQFYGN----- 305 (583)
Q Consensus 239 ~~~~~~~~~~~~v~~~~~~~~~~~l~s--~~~d~~i~~w~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~----- 305 (583)
...........+|..-.+.|=|.-... .-.+..+.+++-+... ...+.+..+.||.+.|....|-..
T Consensus 236 ~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~ 315 (1081)
T KOG0309|consen 236 TESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDG 315 (1081)
T ss_pred cccceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccC
Confidence 222221234456666666664432221 1112233333211110 135678899999998877666421
Q ss_pred ----CCCEEEEeeCCCcEEEEEcccc
Q psy14906 306 ----SSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 306 ----~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
..-.|++-+.|.++++|-+...
T Consensus 316 d~d~rdfQLVTWSkD~~lrlWpI~~~ 341 (1081)
T KOG0309|consen 316 DYDSRDFQLVTWSKDQTLRLWPIDSQ 341 (1081)
T ss_pred CCCccceeEEEeecCCceEeeeccHH
Confidence 1247999999999999987643
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.2e-09 Score=92.04 Aligned_cols=292 Identities=13% Similarity=0.181 Sum_probs=168.1
Q ss_pred cccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC---ceeeEEeccCC------------CCCeeEEEeeCC-CCEE
Q psy14906 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN---GRLLRIREGHS------------APPNYIQFYGNS-SDNI 310 (583)
Q Consensus 247 ~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~---~~~~~~~~~~~------------~~v~~~~~~~~~-~~~l 310 (583)
....|+++.|...|.+|++|...|.|.+| ...... .+....+++|. ..|..+.|..+. ...+
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlf--er~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hF 102 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLF--EREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHF 102 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEe--ecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceE
Confidence 34678999999999999999999999999 433222 22334455553 357788887432 3567
Q ss_pred EEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEe
Q psy14906 311 LSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLW 390 (583)
Q Consensus 311 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 390 (583)
+..+.|.+|++|.+......-.....-.........+.. .....+..|... ....++++.
T Consensus 103 LlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~-~s~~~l~lprls----------~hd~iiaa~--------- 162 (460)
T COG5170 103 LLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPL-TSTKELLLPRLS----------EHDEIIAAK--------- 162 (460)
T ss_pred EEecCCceeeeeeeecccchhhhccccccccccccCCCc-CCHHHhhccccc----------ccceEEEec---------
Confidence 777889999999987653211100000000000000000 000000000000 000011000
Q ss_pred ecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccc---cCCCCCCCcccCeeEEEE
Q psy14906 391 SFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGS---YGHDNQPGHVGGVRGVVS 467 (583)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~---~~~~~~~~h~~~v~~~~~ 467 (583)
+...+...|...+.++.+..|...++++ .+-.|-+|++.-...... +....+..-..-|++..|
T Consensus 163 ------------p~rvyaNaH~yhiNSiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeF 229 (460)
T COG5170 163 ------------PCRVYANAHPYHINSISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEF 229 (460)
T ss_pred ------------cceeccccceeEeeeeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhccc
Confidence 0001223444678899999998888775 456688898764332211 111111222346888899
Q ss_pred eCCC-cEEEEeecCCcEEEEEccCCC-----CCceE-Ee---e------ccCCeeeEEeccCCcEEEEEeCCceEEEEEc
Q psy14906 468 DNLN-QIVISGGNDQTVKVWHFKQTG-----KPPLR-SI---K------LDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531 (583)
Q Consensus 468 s~~~-~~l~s~~~dg~i~iwd~~~~~-----~~~~~-~~---~------~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 531 (583)
+|.. ..+...+..|.|++-|++... .++.. .+ . .-..|..+.|+++|+++++-+.- +++|||+
T Consensus 230 hp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdyl-tvkiwDv 308 (460)
T COG5170 230 HPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDYL-TVKIWDV 308 (460)
T ss_pred CHhHcceEEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEeccc-eEEEEec
Confidence 9964 456667778999999998431 01110 01 1 11368889999999999986554 8999999
Q ss_pred ccc-ceEEeecccc------------cce---eeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 532 DTC-TIIRKLSGHM------------GQL---TDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 532 ~~~-~~~~~~~~h~------------~~v---~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
... .++.+..-|. ..| ..+.||.|.+.+++|+..+..-++-..
T Consensus 309 nm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp~~ 367 (460)
T COG5170 309 NMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYPTD 367 (460)
T ss_pred ccccCCceeechHHHHHHHHHhhhhccceeeeEEEEecCCcccccccccccceeeeccc
Confidence 754 4555554332 223 247789899999999888877777643
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.9e-07 Score=79.85 Aligned_cols=286 Identities=11% Similarity=0.072 Sum_probs=167.9
Q ss_pred CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe----------cCCeEEEEEccCCceeEEE
Q psy14906 131 SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL----------SNKKIILHNILTDESLMEF 200 (583)
Q Consensus 131 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----------~d~~i~iw~~~~~~~~~~~ 200 (583)
+.+.+.|.++++.+..+. .+-.-.+..+||++.+.++. ..-.|.+||.++.....++
T Consensus 17 ~rv~viD~d~~k~lGmi~-------------~g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI 83 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMID-------------TGFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEI 83 (342)
T ss_dssp EEEEEEETTTTEEEEEEE-------------EESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEE
T ss_pred ceEEEEECCCCcEEEEee-------------cccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceE
Confidence 479999999999888887 23344477899999888753 2346999999999888776
Q ss_pred eccCC-------CeEEEEEecCCCCEEEEE--cCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCe
Q psy14906 201 IQTWG-------PVTALSFRTDGPPMMVSG--SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271 (583)
Q Consensus 201 ~~~~~-------~v~~~~~~~~~~~~l~s~--~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 271 (583)
.-..+ ....++++.|++ +++.. +-.-.|.|-|+..++.+..+. -.+... .+-....-|.+.+.||.
T Consensus 84 ~iP~k~R~~~~~~~~~~~ls~dgk-~~~V~N~TPa~SVtVVDl~~~kvv~ei~--~PGC~~--iyP~~~~~F~~lC~DGs 158 (342)
T PF06433_consen 84 EIPPKPRAQVVPYKNMFALSADGK-FLYVQNFTPATSVTVVDLAAKKVVGEID--TPGCWL--IYPSGNRGFSMLCGDGS 158 (342)
T ss_dssp EETTS-B--BS--GGGEEE-TTSS-EEEEEEESSSEEEEEEETTTTEEEEEEE--GTSEEE--EEEEETTEEEEEETTSC
T ss_pred ecCCcchheecccccceEEccCCc-EEEEEccCCCCeEEEEECCCCceeeeec--CCCEEE--EEecCCCceEEEecCCc
Confidence 53322 224468889998 44443 345679999999999888772 222222 22112245778888999
Q ss_pred EEEEEccCCCCCceee-EEeccCCCCCe-eEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcch
Q psy14906 272 LKLWIFDKADGNGRLL-RIREGHSAPPN-YIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRL 349 (583)
Q Consensus 272 i~~w~~~~~~~~~~~~-~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (583)
+....++......... ..+.....++. .-++.. .+..++..+.+|.|+-.|+........
T Consensus 159 l~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~-~~~~~~F~Sy~G~v~~~dlsg~~~~~~----------------- 220 (342)
T PF06433_consen 159 LLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSR-DGGRLYFVSYEGNVYSADLSGDSAKFG----------------- 220 (342)
T ss_dssp EEEEEETSTSSEEEEEEEESSTTTS-B-S--EEET-TTTEEEEEBTTSEEEEEEETTSSEEEE-----------------
T ss_pred eEEEEECCCCCEeEeeccccCCCCcccccccceEC-CCCeEEEEecCCEEEEEeccCCccccc-----------------
Confidence 9999887543221111 12222223332 233442 455676688899999988876542110
Q ss_pred hccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEE
Q psy14906 350 EKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLI 429 (583)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 429 (583)
.-|.+.+.......+.+ +.-.-+++++..+.|++
T Consensus 221 --------------------------------------~~~~~~t~~e~~~~WrP--------GG~Q~~A~~~~~~rlyv 254 (342)
T PF06433_consen 221 --------------------------------------KPWSLLTDAEKADGWRP--------GGWQLIAYHAASGRLYV 254 (342)
T ss_dssp --------------------------------------EEEESS-HHHHHTTEEE---------SSS-EEEETTTTEEEE
T ss_pred --------------------------------------CcccccCccccccCcCC--------cceeeeeeccccCeEEE
Confidence 11111110000000000 22334555554444433
Q ss_pred Eec----------CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc-EEEEe-ecCCcEEEEEccCCCCCceE
Q psy14906 430 GYS----------SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ-IVISG-GNDQTVKVWHFKQTGKPPLR 497 (583)
Q Consensus 430 ~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~-~~dg~i~iwd~~~~~~~~~~ 497 (583)
--. ...|.+||+.+++.+..+. -..++.+|+.+.+.+ +|++. ..++.+.+||..++ +.++
T Consensus 255 LMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~------l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tG--k~~~ 326 (342)
T PF06433_consen 255 LMHQGGEGSHKDPGTEVWVYDLKTHKRVARIP------LEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATG--KLVR 326 (342)
T ss_dssp EEEE--TT-TTS-EEEEEEEETTTTEEEEEEE------EEEEESEEEEESSSS-EEEEEETTTTEEEEEETTT----EEE
T ss_pred EecCCCCCCccCCceEEEEEECCCCeEEEEEe------CCCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCC--cEEe
Confidence 211 1258899999999998873 245688999999876 55444 45789999999999 8888
Q ss_pred EeeccCCee
Q psy14906 498 SIKLDNGIS 506 (583)
Q Consensus 498 ~~~~~~~v~ 506 (583)
.++.-+.-.
T Consensus 327 ~~~~lG~~~ 335 (342)
T PF06433_consen 327 SIEQLGETP 335 (342)
T ss_dssp EE---SSS-
T ss_pred ehhccCCCc
Confidence 877654433
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.1e-08 Score=82.89 Aligned_cols=234 Identities=10% Similarity=0.025 Sum_probs=153.6
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhh
Q psy14906 260 EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAN 339 (583)
Q Consensus 260 ~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 339 (583)
--+|+.|+..|...+|.....+ ..+.....|...|.-+.-.......+..++.|.++++.+++.+.....+...
T Consensus 84 c~~la~gG~~g~fd~~~~~tn~---~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~--- 157 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTND---GHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQ--- 157 (344)
T ss_pred ccEEEeccccceeeeecccCcc---cceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeecc---
Confidence 3478999999999999654322 2222333333333222111123346777888999999988765432221000
Q ss_pred hhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEE
Q psy14906 340 RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVY 419 (583)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 419 (583)
.-...+++
T Consensus 158 ------------------------------------------------------------------------~~~~ns~~ 165 (344)
T KOG4532|consen 158 ------------------------------------------------------------------------NLTQNSLH 165 (344)
T ss_pred ------------------------------------------------------------------------ccceeeeE
Confidence 01267889
Q ss_pred EccCCcEEEEEecCceEEEEEcccCcc-ccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEE
Q psy14906 420 ITHCGNFVLIGYSSGHVDRFNIQSGAH-RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS 498 (583)
Q Consensus 420 ~s~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 498 (583)
+++|++++++-+....|..|.+..... +..... ......-.+..|+.....+|++..||++.|||++... .+...
T Consensus 166 ~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~---a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~-tpm~~ 241 (344)
T KOG4532|consen 166 YSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYE---APTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMA-TPMAE 241 (344)
T ss_pred EcCCCceEEEecCCCcceEEEeCCccceeeeeEe---cccCCCceeeeeccCcceEEEEecCCcEEEEEecccc-cchhh
Confidence 999999999999999999998874332 222111 2334455678899999999999999999999998763 22211
Q ss_pred -----eeccCCeeeEEeccCCc--EEEEEeCCceEEEEEccccceEEeec-------cccc-ceeeEEecCCCcEEEEEe
Q psy14906 499 -----IKLDNGISFFRTHQESS--MLAVCLDDFTVNIIDIDTCTIIRKLS-------GHMG-QLTDADFSPDSRWLITAS 563 (583)
Q Consensus 499 -----~~~~~~v~~~~~s~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~-------~h~~-~v~~l~~s~d~~~l~s~~ 563 (583)
-.+.+.+..+.|++-|. +|+..-.-+.+.+.|+++++....+. .|.. .|..-.|+.++..+.+.+
T Consensus 242 ~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~ 321 (344)
T KOG4532|consen 242 ISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKN 321 (344)
T ss_pred hcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCccccccc
Confidence 22457899999998775 56666667899999999886544332 2333 377788888877776666
Q ss_pred CCCeEEEEeCCCc
Q psy14906 564 MDCTIRVWDIPSS 576 (583)
Q Consensus 564 ~d~~i~vw~~~~~ 576 (583)
++ .+.-|++.+.
T Consensus 322 e~-~~ae~ni~sr 333 (344)
T KOG4532|consen 322 EL-QGAEYNILSR 333 (344)
T ss_pred ch-hhheeecccc
Confidence 55 3566776543
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=99.12 E-value=5e-07 Score=74.79 Aligned_cols=138 Identities=11% Similarity=0.071 Sum_probs=95.5
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEE
Q psy14906 121 GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEF 200 (583)
Q Consensus 121 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 200 (583)
..+++.|+..+.+.--|..+|....+... ..+|.+-+.- -|++++.|...|.+++.+.++|+..+.+
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~il------------g~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f 89 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAIL------------GVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNF 89 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhh------------CceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeee
Confidence 35677788888888899999888776532 3334333332 5788999999999999999999999888
Q ss_pred eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEE
Q psy14906 201 IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLK 273 (583)
Q Consensus 201 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~ 273 (583)
.....-=......+++. ++..|+.|++.+..|..+..++... +.-.....+-+..|....|..+...|.+.
T Consensus 90 ~~~~~vk~~a~~d~~~g-lIycgshd~~~yalD~~~~~cVyks-kcgG~~f~sP~i~~g~~sly~a~t~G~vl 160 (354)
T KOG4649|consen 90 VILETVKVRAQCDFDGG-LIYCGSHDGNFYALDPKTYGCVYKS-KCGGGTFVSPVIAPGDGSLYAAITAGAVL 160 (354)
T ss_pred eehhhhccceEEcCCCc-eEEEecCCCcEEEecccccceEEec-ccCCceeccceecCCCceEEEEeccceEE
Confidence 76522223344567777 9999999999999999988887776 33333333445555333344444555443
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.1e-08 Score=92.67 Aligned_cols=210 Identities=11% Similarity=0.049 Sum_probs=126.2
Q ss_pred eEEEEeccceeeeeecccCccEEE--EccCCCE-EEEEeC---CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceE
Q psy14906 93 IIYAWRRGIDIVGTYKGHTSPVHL--ILPFGPH-LISVDE---ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVN 166 (583)
Q Consensus 93 ~i~vw~~~~~~~~~~~~h~~~v~~--is~~~~~-l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 166 (583)
.|.+=|.++...+.+.... .... ++|||+. ++..+. ...|.++|+.+++...-. ...+...
T Consensus 170 ~l~~~d~dg~~~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt------------~~~g~~~ 236 (419)
T PRK04043 170 NIVLADYTLTYQKVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIA------------SSQGMLV 236 (419)
T ss_pred eEEEECCCCCceeEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEe------------cCCCcEE
Confidence 5666666665444444333 3333 4999985 554333 356999999888765433 2244556
Q ss_pred EEeeCCCCCEEEEEec---CCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCC--cEEEEeCCCCeehh
Q psy14906 167 VLEPSPVVDIIGVGLS---NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTG--HLTVWNLEDRQVEN 241 (583)
Q Consensus 167 ~~~~s~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~ 241 (583)
...|+|||+.|+.... +..|.++|+.+++. ..+..+........|+|||+.++++....+ .|.+.|+.+++..+
T Consensus 237 ~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~r 315 (419)
T PRK04043 237 VSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQ 315 (419)
T ss_pred eeEECCCCCEEEEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEe
Confidence 6789999998775432 35788889877764 344444333455689999996666665544 57778888776544
Q ss_pred hhhhccccceEEEEEecCCCEEEEEeCC-------CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee
Q psy14906 242 QIKKAHRKVVTGAHFLYNEPLLVTSSPD-------NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 242 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d-------~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 314 (583)
....+. . ...|+|||+.|+..... +.-.+|-++...+..+. +... .......|+| ||+.++...
T Consensus 316 lt~~g~--~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~~---LT~~-~~~~~p~~SP-DG~~I~f~~ 386 (419)
T PRK04043 316 VVFHGK--N--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIRR---LTAN-GVNQFPRFSS-DGGSIMFIK 386 (419)
T ss_pred CccCCC--c--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeEE---CCCC-CCcCCeEECC-CCCEEEEEE
Confidence 331221 1 24899999988877654 22344444544333332 3222 2234588998 788777665
Q ss_pred CC-C--cEEEEEcc
Q psy14906 315 GD-S--TLRIFNTK 325 (583)
Q Consensus 315 ~d-g--~i~iwd~~ 325 (583)
.+ + .+.+.++.
T Consensus 387 ~~~~~~~L~~~~l~ 400 (419)
T PRK04043 387 YLGNQSALGIIRLN 400 (419)
T ss_pred ccCCcEEEEEEecC
Confidence 43 2 24455553
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.3e-07 Score=73.54 Aligned_cols=101 Identities=14% Similarity=0.098 Sum_probs=73.8
Q ss_pred CCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEE
Q psy14906 174 VDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTG 253 (583)
Q Consensus 174 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~ 253 (583)
..+++.|+..+.+.-.|..+|+.+.+-... ..+.+-+.- -|+ +++.|+..|.+++.+..+|+....+ .....--..
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~ilg-~RiE~sa~v-vgd-fVV~GCy~g~lYfl~~~tGs~~w~f-~~~~~vk~~ 98 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILG-VRIECSAIV-VGD-FVVLGCYSGGLYFLCVKTGSQIWNF-VILETVKVR 98 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhhC-ceeeeeeEE-ECC-EEEEEEccCcEEEEEecchhheeee-eehhhhccc
Confidence 457788899999999999999988765433 445444443 345 7999999999999999999777666 222221123
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEcc
Q psy14906 254 AHFLYNEPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 254 ~~~~~~~~~l~s~~~d~~i~~w~~~ 278 (583)
....+++..+..++.|+.....|..
T Consensus 99 a~~d~~~glIycgshd~~~yalD~~ 123 (354)
T KOG4649|consen 99 AQCDFDGGLIYCGSHDGNFYALDPK 123 (354)
T ss_pred eEEcCCCceEEEecCCCcEEEeccc
Confidence 3456789999999999988877543
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=99.07 E-value=9.1e-08 Score=79.26 Aligned_cols=245 Identities=10% Similarity=0.034 Sum_probs=153.5
Q ss_pred CCCEEEEEecCCeEEEEEccCCceeE-EEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhcccc--
Q psy14906 173 VVDIIGVGLSNKKIILHNILTDESLM-EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRK-- 249 (583)
Q Consensus 173 ~~~~l~~~~~d~~i~iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-- 249 (583)
...+||.|+..|...+|...+.+... ....+...|+-+.=.-+...-+..++.|.++++.+++.+.....+ |..
T Consensus 83 kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~---h~~~~ 159 (344)
T KOG4532|consen 83 KCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAV---HNQNL 159 (344)
T ss_pred cccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCccccee---ecccc
Confidence 45689999999999999998665433 333443333332222233334677788899999988755444333 333
Q ss_pred ceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeE-EeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccc
Q psy14906 250 VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLR-IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328 (583)
Q Consensus 250 ~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 328 (583)
.+.++++++|++++++.+....|-.|.++... ...+. ......+.-.+..|+. ....++++..||++.+||++...
T Consensus 160 ~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~s--ey~~~~~~a~t~D~gF~~S~s~-~~~~FAv~~Qdg~~~I~DVR~~~ 236 (344)
T KOG4532|consen 160 TQNSLHYSNDPSWGSSVGDSRRVFRYAIDDES--EYIENIYEAPTSDHGFYNSFSE-NDLQFAVVFQDGTCAIYDVRNMA 236 (344)
T ss_pred ceeeeEEcCCCceEEEecCCCcceEEEeCCcc--ceeeeeEecccCCCceeeeecc-CcceEEEEecCCcEEEEEecccc
Confidence 38899999999999999999999999777543 23333 3333344557788885 67899999999999999998754
Q ss_pred cceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccccc
Q psy14906 329 SNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCK 408 (583)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 408 (583)
........ ....+-..+....++. .....++.....-+.+.+.|......-+....++...
T Consensus 237 tpm~~~ss----------------trp~hnGa~R~c~Fsl---~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~ 297 (344)
T KOG4532|consen 237 TPMAEISS----------------TRPHHNGAFRVCRFSL---YGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVE 297 (344)
T ss_pred cchhhhcc----------------cCCCCCCceEEEEecC---CCcceEEEEecCcceEEEEEcccCceeeEEecCcccc
Confidence 33221100 0011111222222222 3335677777788888899988776655555554443
Q ss_pred ccCCCC-ceEEEEccCCcEEEEEecCceEEEEEccc
Q psy14906 409 QAKQSK-PTCVYITHCGNFVLIGYSSGHVDRFNIQS 443 (583)
Q Consensus 409 ~~~~~~-i~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 443 (583)
..+..+ +....|+.++..+.+.+++. +.-|++.+
T Consensus 298 ~~~~tq~ifgt~f~~~n~s~~v~~e~~-~ae~ni~s 332 (344)
T KOG4532|consen 298 RKHNTQHIFGTNFNNENESNDVKNELQ-GAEYNILS 332 (344)
T ss_pred ccccccccccccccCCCcccccccchh-hheeeccc
Confidence 333333 77778887777666655443 44454443
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.5e-08 Score=83.41 Aligned_cols=164 Identities=13% Similarity=0.129 Sum_probs=105.8
Q ss_pred eeeeecccCcc--EEEEccCCCEEEEEeCCCcEEEEEcCCCcEE-EEeeccCCceEEecccCCcceEEEeeCCCCCEEEE
Q psy14906 103 IVGTYKGHTSP--VHLILPFGPHLISVDEESNVKVWDIKAEETY-LELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV 179 (583)
Q Consensus 103 ~~~~~~~h~~~--v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 179 (583)
..+.+.-|+++ -...+--+..+++++.||.+.+.+.+.-..+ .+++. .|. .-.+..+...++.+.+
T Consensus 81 ~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~----------~~~-~~as~~~~~~~~~i~s 149 (319)
T KOG4714|consen 81 PFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPS----------IHS-GSASRKICRHGNSILS 149 (319)
T ss_pred ceeeeeccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhccc----------ccc-cccccceeecccEEec
Confidence 34444444433 3334666788999999999999997762211 11110 111 1111222233444443
Q ss_pred Ee-----cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEE
Q psy14906 180 GL-----SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGA 254 (583)
Q Consensus 180 ~~-----~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~ 254 (583)
+. .-+..+.|+++..+.+..-......|.+++-+|..+.++++|+.||.+.+||.++......+...|+.++..+
T Consensus 150 ~~~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV 229 (319)
T KOG4714|consen 150 GGCGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEV 229 (319)
T ss_pred CCcceEeeccceeeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhhe
Confidence 31 1234556665433222221222245999999998887999999999999999999877777778999999999
Q ss_pred EEecC-CCEEEEEeCCCeEEEEEc
Q psy14906 255 HFLYN-EPLLVTSSPDNTLKLWIF 277 (583)
Q Consensus 255 ~~~~~-~~~l~s~~~d~~i~~w~~ 277 (583)
.|+|. +..|+++++||.+--||-
T Consensus 230 ~FHpk~p~~Lft~sedGslw~wda 253 (319)
T KOG4714|consen 230 HFHPKNPEHLFTCSEDGSLWHWDA 253 (319)
T ss_pred eccCCCchheeEecCCCcEEEEcC
Confidence 99985 568999999999888854
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.3e-06 Score=77.63 Aligned_cols=142 Identities=14% Similarity=0.192 Sum_probs=97.9
Q ss_pred CCceEEEEccCCcEEEEEecC--------ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEE-EeecCCcE
Q psy14906 413 SKPTCVYITHCGNFVLIGYSS--------GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI-SGGNDQTV 483 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~~~dg~i 483 (583)
.....++++|+|++.++.... |.|+.++.. ++..... ..-...+.|+|+|+++.|+ +-+..+.|
T Consensus 86 ~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~------~~~~~pNGi~~s~dg~~lyv~ds~~~~i 158 (246)
T PF08450_consen 86 NRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVA------DGLGFPNGIAFSPDGKTLYVADSFNGRI 158 (246)
T ss_dssp EEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEE------EEESSEEEEEEETTSSEEEEEETTTTEE
T ss_pred CCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEe------cCcccccceEECCcchheeeccccccee
Confidence 457789999999976665433 667778777 4433332 3455678999999998765 55677889
Q ss_pred EEEEccCCCCCce--EEe-eccC---CeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEec-CCC
Q psy14906 484 KVWHFKQTGKPPL--RSI-KLDN---GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFS-PDS 556 (583)
Q Consensus 484 ~iwd~~~~~~~~~--~~~-~~~~---~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s-~d~ 556 (583)
..+++........ +.+ .... ..-.+++..+|++.++....+.|.++|.+ |+.+..+......+++++|. ++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~ 237 (246)
T PF08450_consen 159 WRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGPDG 237 (246)
T ss_dssp EEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEESTTS
T ss_pred EEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECCCC
Confidence 9999975421121 222 2222 37789999999998888889999999988 88888877666689999994 665
Q ss_pred cEEEEE
Q psy14906 557 RWLITA 562 (583)
Q Consensus 557 ~~l~s~ 562 (583)
+.|...
T Consensus 238 ~~L~vT 243 (246)
T PF08450_consen 238 KTLYVT 243 (246)
T ss_dssp SEEEEE
T ss_pred CEEEEE
Confidence 655543
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=98.99 E-value=4.6e-07 Score=80.05 Aligned_cols=157 Identities=13% Similarity=0.105 Sum_probs=91.2
Q ss_pred EEEEEecCceEEEEEcc-cCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeec---
Q psy14906 426 FVLIGYSSGHVDRFNIQ-SGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL--- 501 (583)
Q Consensus 426 ~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--- 501 (583)
.+.+-+.||.+.-+.+. .|+............+......-++...+..++-.+.+|.|+--|+.....+.......
T Consensus 149 ~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~ 228 (342)
T PF06433_consen 149 GFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTD 228 (342)
T ss_dssp EEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-H
T ss_pred ceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCc
Confidence 35555666766666665 33332211100001222223344555555555557788999888887763222222221
Q ss_pred --------cCCeeeEEeccCCcEEEEEeCC----------ceEEEEEccccceEEeecccccceeeEEecCCCc-EEEEE
Q psy14906 502 --------DNGISFFRTHQESSMLAVCLDD----------FTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSR-WLITA 562 (583)
Q Consensus 502 --------~~~v~~~~~s~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~-~l~s~ 562 (583)
++.-.-+++++..+.|++-... ..|.++|+.+++.+.++.. ..++.+|+.+.|.+ +|++.
T Consensus 229 ~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~ 307 (342)
T PF06433_consen 229 AEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYAL 307 (342)
T ss_dssp HHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEE
T ss_pred cccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEE
Confidence 1234457787766555543221 2688889999999998873 35688999998765 66554
Q ss_pred -eCCCeEEEEeCCCcccccccC
Q psy14906 563 -SMDCTIRVWDIPSSQLIDCFQ 583 (583)
Q Consensus 563 -~~d~~i~vw~~~~~~~~~~~~ 583 (583)
..++.+.+||..+|+++++++
T Consensus 308 ~~~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 308 SAGDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp ETTTTEEEEEETTT--EEEEE-
T ss_pred cCCCCeEEEEeCcCCcEEeehh
Confidence 457999999999999988753
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.98 E-value=5.4e-09 Score=85.90 Aligned_cols=151 Identities=20% Similarity=0.272 Sum_probs=100.3
Q ss_pred EEccCCcEEEEEecCceEEEEEcccCcccc-ccCCCCCCCcccCeeEEEEeCCCcEEEEee-----cCCcEEEEEccCCC
Q psy14906 419 YITHCGNFVLIGYSSGHVDRFNIQSGAHRG-SYGHDNQPGHVGGVRGVVSDNLNQIVISGG-----NDQTVKVWHFKQTG 492 (583)
Q Consensus 419 ~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-----~dg~i~iwd~~~~~ 492 (583)
+.+--+..+++++.||.+.+++.+.-.... ..+ ..|.+ -.+.++...++.+.++. .-+..++|+++...
T Consensus 96 ~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~----~~~~~-~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~ 170 (319)
T KOG4714|consen 96 ACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIP----SIHSG-SASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIK 170 (319)
T ss_pred cccccCCceEecCCCceEEEEechHHHhhhhhcc----ccccc-ccccceeecccEEecCCcceEeeccceeeecccccc
Confidence 334456789999999999999987521111 110 11221 11222333445454443 12356777776542
Q ss_pred CCceEEeeccCCeeeEEeccCCc-EEEEEeCCceEEEEEccccceE-EeecccccceeeEEecC-CCcEEEEEeCCCeEE
Q psy14906 493 KPPLRSIKLDNGISFFRTHQESS-MLAVCLDDFTVNIIDIDTCTII-RKLSGHMGQLTDADFSP-DSRWLITASMDCTIR 569 (583)
Q Consensus 493 ~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~-~~~~~h~~~v~~l~~s~-d~~~l~s~~~d~~i~ 569 (583)
...........+++++-+|..+ .+++|++||.+-+||.+..... ..++.|+.+|+.+-|+| ++..|+++++||.+.
T Consensus 171 -t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw 249 (319)
T KOG4714|consen 171 -TLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLW 249 (319)
T ss_pred -cccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEE
Confidence 1122222234599999998655 7778899999999999887543 45778999999999999 677899999999999
Q ss_pred EEeCCC
Q psy14906 570 VWDIPS 575 (583)
Q Consensus 570 vw~~~~ 575 (583)
-||..+
T Consensus 250 ~wdas~ 255 (319)
T KOG4714|consen 250 HWDAST 255 (319)
T ss_pred EEcCCC
Confidence 999763
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.4e-08 Score=95.85 Aligned_cols=113 Identities=14% Similarity=0.235 Sum_probs=91.1
Q ss_pred cceEEEeeCCCCCEEEEEec----CCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 163 SCVNVLEPSPVVDIIGVGLS----NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~~~----d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
+.-+-..|+|...++|+++. .|.|.||- ++|++......+ -.+++++|+|..- +|+.|-.-|.+.+|...+.+
T Consensus 16 avsti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P-~hatSLCWHpe~~-vLa~gwe~g~~~v~~~~~~e 92 (1416)
T KOG3617|consen 16 AVSTISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTYP-VHATSLCWHPEEF-VLAQGWEMGVSDVQKTNTTE 92 (1416)
T ss_pred ccccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccccc-eehhhhccChHHH-HHhhccccceeEEEecCCce
Confidence 33445679999999998864 47888884 567765544433 4567899999876 88899999999999988766
Q ss_pred ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccC
Q psy14906 239 VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279 (583)
Q Consensus 239 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~ 279 (583)
..... ..|+.+|..+.||++|..++++..-|.+.+|.++.
T Consensus 93 ~htv~-~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~ 132 (1416)
T KOG3617|consen 93 THTVV-ETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDV 132 (1416)
T ss_pred eeeec-cCCCCCceeEEecCCCCeEEEcCCCceeEEEEeee
Confidence 55555 78999999999999999999999999999998874
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.96 E-value=3.9e-07 Score=80.95 Aligned_cols=216 Identities=14% Similarity=0.148 Sum_probs=132.9
Q ss_pred CCeEEEEec-cceeeeeecc---cCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceE
Q psy14906 91 NNIIYAWRR-GIDIVGTYKG---HTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVN 166 (583)
Q Consensus 91 ~~~i~vw~~-~~~~~~~~~~---h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 166 (583)
++.|..||. +++.+-...- ....+....+++.++++++.++.|..||..+|+.+.+..+... ....
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~--------~~~~-- 71 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGP--------ISGA-- 71 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSC--------GGSG--
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeecccc--------ccce--
Confidence 566777775 5555544432 3333322355788888888999999999999999988875211 0111
Q ss_pred EEeeCCCCCEEEEEecCCeEEEEEccCCceeEEE-eccC---CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhh
Q psy14906 167 VLEPSPVVDIIGVGLSNKKIILHNILTDESLMEF-IQTW---GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242 (583)
Q Consensus 167 ~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~---~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 242 (583)
...++..++++..++.+..+|..+|+.+.+. .... ..........++. .++.+..++.|..+|+.+|+.+..
T Consensus 72 ---~~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~l~~~d~~tG~~~w~ 147 (238)
T PF13360_consen 72 ---PVVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGD-RLYVGTSSGKLVALDPKTGKLLWK 147 (238)
T ss_dssp ---EEEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETT-EEEEEETCSEEEEEETTTTEEEEE
T ss_pred ---eeecccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecC-EEEEEeccCcEEEEecCCCcEEEE
Confidence 1224566777778889999999999999984 3221 1122233333355 678888899999999999998766
Q ss_pred hhhccccc----------eEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEE
Q psy14906 243 IKKAHRKV----------VTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILS 312 (583)
Q Consensus 243 ~~~~~~~~----------v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 312 (583)
.. ..... +..-....++ .++.++.++.+..+|+. .++.+.... ...+..+ .. .++..++.
T Consensus 148 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~----tg~~~w~~~--~~~~~~~-~~-~~~~~l~~ 217 (238)
T PF13360_consen 148 YP-VGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLA----TGEKLWSKP--ISGIYSL-PS-VDGGTLYV 217 (238)
T ss_dssp EE-SSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETT----TTEEEEEEC--SS-ECEC-EE-CCCTEEEE
T ss_pred ee-cCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECC----CCCEEEEec--CCCccCC-ce-eeCCEEEE
Confidence 62 22211 1222222344 66666667753333554 333332222 1222221 23 36778888
Q ss_pred eeCCCcEEEEEccccccc
Q psy14906 313 AAGDSTLRIFNTKSETSN 330 (583)
Q Consensus 313 ~~~dg~i~iwd~~~~~~~ 330 (583)
++.++.+..||+++++..
T Consensus 218 ~~~~~~l~~~d~~tG~~~ 235 (238)
T PF13360_consen 218 TSSDGRLYALDLKTGKVV 235 (238)
T ss_dssp EETTTEEEEEETTTTEEE
T ss_pred EeCCCEEEEEECCCCCEE
Confidence 889999999999998753
|
... |
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.3e-09 Score=90.10 Aligned_cols=147 Identities=14% Similarity=0.198 Sum_probs=118.3
Q ss_pred EEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC---CCCceEEeeccCCe
Q psy14906 429 IGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT---GKPPLRSIKLDNGI 505 (583)
Q Consensus 429 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~~~v 505 (583)
+.+.+-.+-+-|+++|.... + ...+.|.++.|...++++..|+.+|.|...|++.. ...+...+.|++.|
T Consensus 229 s~G~sqqv~L~nvetg~~qs-f------~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssv 301 (425)
T KOG2695|consen 229 SVGLSQQVLLTNVETGHQQS-F------QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSV 301 (425)
T ss_pred cccccceeEEEEeecccccc-c------ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcch
Confidence 33445568888888775432 2 35677889999988999999999999999999864 12566788899999
Q ss_pred eeEEecc-CCcEEEEEeCCceEEEEEccccce---EEeecccccceeeEE--ecCCCcEEEEEeCCCeEEEEeCCCcccc
Q psy14906 506 SFFRTHQ-ESSMLAVCLDDFTVNIIDIDTCTI---IRKLSGHMGQLTDAD--FSPDSRWLITASMDCTIRVWDIPSSQLI 579 (583)
Q Consensus 506 ~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~---~~~~~~h~~~v~~l~--~s~d~~~l~s~~~d~~i~vw~~~~~~~~ 579 (583)
+++..-. ++++|.+.+.+|+|++||.+--++ +..+.||...-.-+- ..+....+++++.|...+||.+.+|.++
T Consensus 302 tslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl 381 (425)
T KOG2695|consen 302 TSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLL 381 (425)
T ss_pred hhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCcee
Confidence 9998877 888999999999999999987666 888999976544443 3456678899999999999999999998
Q ss_pred ccc
Q psy14906 580 DCF 582 (583)
Q Consensus 580 ~~~ 582 (583)
.++
T Consensus 382 ~ti 384 (425)
T KOG2695|consen 382 CTI 384 (425)
T ss_pred ecc
Confidence 875
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.94 E-value=2e-06 Score=75.25 Aligned_cols=222 Identities=16% Similarity=0.185 Sum_probs=148.6
Q ss_pred cEEEEEeCCCceEEEEe-eCCeEEEEecCCcEEEeecCCCCCCe----EEEEeeCeEEEEEc------CCeEEEEecc--
Q psy14906 34 VVARFIRRRKETLFVTC-VGKAFHVYGCNHFKLLSVSPQHEDDI----TCLSSDFFHIYTSA------NNIIYAWRRG-- 100 (583)
Q Consensus 34 ~~~~~~p~~~~~~i~~~-~~~~i~v~d~~~~~~~~~~~~h~~~v----~~~~~~~~~~~~~~------~~~i~vw~~~-- 100 (583)
..++.+|+....++++- -+.-..+||+.+++..+.+...++.- -+++.||+++++.. .|.|-|||..
T Consensus 8 H~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~ 87 (305)
T PF07433_consen 8 HGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARG 87 (305)
T ss_pred cceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCC
Confidence 34556665555433333 57788899999999988776433332 25666898888763 4589999976
Q ss_pred ceeeeeecccCccEEEE--ccCCCEEEEEeC------------------CCcEEEEEcCCCcEEEEeeccCCceEEeccc
Q psy14906 101 IDIVGTYKGHTSPVHLI--LPFGPHLISVDE------------------ESNVKVWDIKAEETYLELSFDNDTFKIMGKR 160 (583)
Q Consensus 101 ~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 160 (583)
.+.+..+..|.-.=..+ .|||+.|+.+.. +.++...|..+|+.+.+..+.+. .
T Consensus 88 ~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~-------~ 160 (305)
T PF07433_consen 88 YRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPD-------L 160 (305)
T ss_pred cEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCcc-------c
Confidence 45666676654333333 899988877521 23567777888888877654321 5
Q ss_pred CCcceEEEeeCCCCCEEEEEecCCe-------EEEEEccCCceeEEEec-------cCCCeEEEEEecCCCCEEEEEcCC
Q psy14906 161 WNSCVNVLEPSPVVDIIGVGLSNKK-------IILHNILTDESLMEFIQ-------TWGPVTALSFRTDGPPMMVSGSNT 226 (583)
Q Consensus 161 ~~~~i~~~~~s~~~~~l~~~~~d~~-------i~iw~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~~l~s~~~d 226 (583)
|.-.|+.+++.++|..++..-..|. +-+++ .++.+..+.. -.+-+-+|++++++..+.+|+-.-
T Consensus 161 ~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~--~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrG 238 (305)
T PF07433_consen 161 HQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHR--RGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRG 238 (305)
T ss_pred cccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEc--CCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCC
Confidence 7789999999999987776554432 33333 3333333332 236789999999998555667778
Q ss_pred CcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC
Q psy14906 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP 268 (583)
Q Consensus 227 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 268 (583)
+.+.+||..+++++... .-..+..++-.+++ ++++.+.
T Consensus 239 g~~~~~d~~tg~~~~~~---~l~D~cGva~~~~~-f~~ssG~ 276 (305)
T PF07433_consen 239 GRVAVWDAATGRLLGSV---PLPDACGVAPTDDG-FLVSSGQ 276 (305)
T ss_pred CEEEEEECCCCCEeecc---ccCceeeeeecCCc-eEEeCCC
Confidence 89999999999988776 33456677776666 5655543
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.2e-06 Score=73.94 Aligned_cols=240 Identities=14% Similarity=0.161 Sum_probs=144.1
Q ss_pred ceEEEeeCC-CCCEEEEEecCC-eEEEEEccCCceeEEEeccCCCe--EEEEEecCCCCEEEEEc-----CCCcEEEEeC
Q psy14906 164 CVNVLEPSP-VVDIIGVGLSNK-KIILHNILTDESLMEFIQTWGPV--TALSFRTDGPPMMVSGS-----NTGHLTVWNL 234 (583)
Q Consensus 164 ~i~~~~~s~-~~~~l~~~~~d~-~i~iw~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~l~s~~-----~dg~i~vwd~ 234 (583)
....++.+| ....++.+-.-| ...+||..+++....+....+.- -.-.|++||+ +|++.- ..|.|-|||.
T Consensus 6 RgH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~-~LytTEnd~~~g~G~IgVyd~ 84 (305)
T PF07433_consen 6 RGHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGR-LLYTTENDYETGRGVIGVYDA 84 (305)
T ss_pred cccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCC-EEEEeccccCCCcEEEEEEEC
Confidence 344578888 555666666655 47789999999887766443332 2358999999 566543 3578999999
Q ss_pred C-CCeehhhhhhccccceEEEEEecCCCEEEEEeC-------CCeEEEE---------EccCCCCCceeeEE--e--ccC
Q psy14906 235 E-DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP-------DNTLKLW---------IFDKADGNGRLLRI--R--EGH 293 (583)
Q Consensus 235 ~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-------d~~i~~w---------~~~~~~~~~~~~~~--~--~~~ 293 (583)
. +.+.+.++ ..|.-....+.+.|||+.|+.+-. .|.-++. -+|.. +++.+.. + ..|
T Consensus 85 ~~~~~ri~E~-~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~--sG~ll~q~~Lp~~~~ 161 (305)
T PF07433_consen 85 ARGYRRIGEF-PSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDAR--SGALLEQVELPPDLH 161 (305)
T ss_pred cCCcEEEeEe-cCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecC--CCceeeeeecCcccc
Confidence 9 56777777 566666778899999987777631 1222221 01222 2233322 3 235
Q ss_pred CCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccc
Q psy14906 294 SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKD 373 (583)
Q Consensus 294 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (583)
...+..+++.+ +|..++..-..|. ...
T Consensus 162 ~lSiRHLa~~~-~G~V~~a~Q~qg~-------~~~--------------------------------------------- 188 (305)
T PF07433_consen 162 QLSIRHLAVDG-DGTVAFAMQYQGD-------PGD--------------------------------------------- 188 (305)
T ss_pred ccceeeEEecC-CCcEEEEEecCCC-------CCc---------------------------------------------
Confidence 55677777764 4444333322221 000
Q ss_pred cccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec-CceEEEEEcccCccccccCC
Q psy14906 374 WNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS-SGHVDRFNIQSGAHRGSYGH 452 (583)
Q Consensus 374 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~ 452 (583)
...+++....+..+.......... ..-..++-++++++++.++++.+- .|.+.+||..+++.+....
T Consensus 189 ~~PLva~~~~g~~~~~~~~p~~~~-----------~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~- 256 (305)
T PF07433_consen 189 APPLVALHRRGGALRLLPAPEEQW-----------RRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVP- 256 (305)
T ss_pred cCCeEEEEcCCCcceeccCChHHH-----------HhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccc-
Confidence 012233333333333333322111 111278999999999998877664 5789999999999887652
Q ss_pred CCCCCcccCeeEEEEeCCCcEEEEeec
Q psy14906 453 DNQPGHVGGVRGVVSDNLNQIVISGGN 479 (583)
Q Consensus 453 ~~~~~h~~~v~~~~~s~~~~~l~s~~~ 479 (583)
-..+..++..+++ ++++.+.
T Consensus 257 ------l~D~cGva~~~~~-f~~ssG~ 276 (305)
T PF07433_consen 257 ------LPDACGVAPTDDG-FLVSSGQ 276 (305)
T ss_pred ------cCceeeeeecCCc-eEEeCCC
Confidence 3346677777666 6666554
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=98.92 E-value=7.2e-06 Score=72.94 Aligned_cols=214 Identities=15% Similarity=0.111 Sum_probs=129.4
Q ss_pred eEEEEE-cCCeEEEEeccceeeeeecccCccEEEE-c-cCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEeccc
Q psy14906 84 FHIYTS-ANNIIYAWRRGIDIVGTYKGHTSPVHLI-L-PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKR 160 (583)
Q Consensus 84 ~~~~~~-~~~~i~vw~~~~~~~~~~~~h~~~v~~i-s-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 160 (583)
.+..+. ..+.|..|+........+.... +.-.. . +++ .|+.+..+ .+.++|..+++.......... ..
T Consensus 13 ~l~~~D~~~~~i~~~~~~~~~~~~~~~~~-~~G~~~~~~~g-~l~v~~~~-~~~~~d~~~g~~~~~~~~~~~------~~ 83 (246)
T PF08450_consen 13 RLYWVDIPGGRIYRVDPDTGEVEVIDLPG-PNGMAFDRPDG-RLYVADSG-GIAVVDPDTGKVTVLADLPDG------GV 83 (246)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEESSS-EEEEEEECTTS-EEEEEETT-CEEEEETTTTEEEEEEEEETT------CS
T ss_pred EEEEEEcCCCEEEEEECCCCeEEEEecCC-CceEEEEccCC-EEEEEEcC-ceEEEecCCCcEEEEeeccCC------Cc
Confidence 444444 4567777776554444333333 33333 4 454 44444444 455669888865544442100 01
Q ss_pred CCcceEEEeeCCCCCEEEEEecC--------CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEE
Q psy14906 161 WNSCVNVLEPSPVVDIIGVGLSN--------KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVW 232 (583)
Q Consensus 161 ~~~~i~~~~~s~~~~~l~~~~~d--------~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 232 (583)
.....+.+++.|+|++.++.... |.|..++.. ++....... -...+.|+|+|+++.++++-+..+.|..+
T Consensus 84 ~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~-~~~pNGi~~s~dg~~lyv~ds~~~~i~~~ 161 (246)
T PF08450_consen 84 PFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADG-LGFPNGIAFSPDGKTLYVADSFNGRIWRF 161 (246)
T ss_dssp CTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEE-ESSEEEEEEETTSSEEEEEETTTTEEEEE
T ss_pred ccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecC-cccccceEECCcchheeecccccceeEEE
Confidence 45788999999999977765543 456777766 444433333 46789999999998555677888899999
Q ss_pred eCCCCe-------ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeC
Q psy14906 233 NLEDRQ-------VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGN 305 (583)
Q Consensus 233 d~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 305 (583)
++.... ....+ ....+..-.+++..+|++.++....+.|.+++- .++.+..+......+++++|..+
T Consensus 162 ~~~~~~~~~~~~~~~~~~-~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p-----~G~~~~~i~~p~~~~t~~~fgg~ 235 (246)
T PF08450_consen 162 DLDADGGELSNRRVFIDF-PGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDP-----DGKLLREIELPVPRPTNCAFGGP 235 (246)
T ss_dssp EEETTTCCEEEEEEEEE--SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEET-----TSCEEEEEE-SSSSEEEEEEEST
T ss_pred eccccccceeeeeeEEEc-CCCCcCCCcceEcCCCCEEEEEcCCCEEEEECC-----CccEEEEEcCCCCCEEEEEEECC
Confidence 986321 12222 111234778999999998888777888888853 35555555544458899999644
Q ss_pred CCCEEEEee
Q psy14906 306 SSDNILSAA 314 (583)
Q Consensus 306 ~~~~l~~~~ 314 (583)
+.+.|+..+
T Consensus 236 ~~~~L~vTt 244 (246)
T PF08450_consen 236 DGKTLYVTT 244 (246)
T ss_dssp TSSEEEEEE
T ss_pred CCCEEEEEe
Confidence 656655443
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.4e-06 Score=75.93 Aligned_cols=212 Identities=12% Similarity=0.032 Sum_probs=136.7
Q ss_pred CCeEEEEecCCcEEEeecCC---CCCCeE-EEEeeCeEEEEEcCCeEEEEec-cceeeeeecccCccEEE-EccCCCEEE
Q psy14906 52 GKAFHVYGCNHFKLLSVSPQ---HEDDIT-CLSSDFFHIYTSANNIIYAWRR-GIDIVGTYKGHTSPVHL-ILPFGPHLI 125 (583)
Q Consensus 52 ~~~i~v~d~~~~~~~~~~~~---h~~~v~-~~~~~~~~~~~~~~~~i~vw~~-~~~~~~~~~~h~~~v~~-is~~~~~l~ 125 (583)
++.|..||+.+|+.+....- ....+. .+..++.+++++.++.|..||. +++.+-.+.. ..++.. ...++..++
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~~~~~~~v~ 80 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAPVVDGGRVY 80 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGEEEETTEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec-cccccceeeecccccc
Confidence 67899999999999976642 222222 2224567777789999999996 7776666553 222111 244566677
Q ss_pred EEeCCCcEEEEEcCCCcEEEEe-eccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccC
Q psy14906 126 SVDEESNVKVWDIKAEETYLEL-SFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTW 204 (583)
Q Consensus 126 s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~ 204 (583)
.++.++.|..+|..+|+.+.+. ..... .. .....+....+++.++++..++.|..+|+++|+.+.......
T Consensus 81 v~~~~~~l~~~d~~tG~~~W~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~ 152 (238)
T PF13360_consen 81 VGTSDGSLYALDAKTGKVLWSIYLTSSP-------PA-GVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGE 152 (238)
T ss_dssp EEETTSEEEEEETTTSCEEEEEEE-SSC-------TC-STB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESST
T ss_pred cccceeeeEecccCCcceeeeecccccc-------cc-ccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCC
Confidence 7778889999999999999884 32100 00 122223333348888888889999999999999998887643
Q ss_pred CCe----------EEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEE
Q psy14906 205 GPV----------TALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKL 274 (583)
Q Consensus 205 ~~v----------~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~ 274 (583)
... ..-....++ .++.++.++.+..+|+.+++.+... . ...+..+ ...++..|+.++.++.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~g~~~~~d~~tg~~~w~~--~-~~~~~~~-~~~~~~~l~~~~~~~~l~~ 226 (238)
T PF13360_consen 153 PRGSSPISSFSDINGSPVISDG--RVYVSSGDGRVVAVDLATGEKLWSK--P-ISGIYSL-PSVDGGTLYVTSSDGRLYA 226 (238)
T ss_dssp T-SS--EEEETTEEEEEECCTT--EEEEECCTSSEEEEETTTTEEEEEE--C-SS-ECEC-EECCCTEEEEEETTTEEEE
T ss_pred CCCCcceeeecccccceEEECC--EEEEEcCCCeEEEEECCCCCEEEEe--c-CCCccCC-ceeeCCEEEEEeCCCEEEE
Confidence 221 122222234 5666776775444499999866433 1 2223221 3567778888889999999
Q ss_pred EEcc
Q psy14906 275 WIFD 278 (583)
Q Consensus 275 w~~~ 278 (583)
||+.
T Consensus 227 ~d~~ 230 (238)
T PF13360_consen 227 LDLK 230 (238)
T ss_dssp EETT
T ss_pred EECC
Confidence 9664
|
... |
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.3e-09 Score=62.42 Aligned_cols=39 Identities=38% Similarity=0.734 Sum_probs=36.9
Q ss_pred cceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEe
Q psy14906 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 534 ~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~ 572 (583)
++++.++.+|.+.|++++|+|++++|++++.|++|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 467889999999999999999999999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.6e-07 Score=86.73 Aligned_cols=136 Identities=17% Similarity=0.183 Sum_probs=93.3
Q ss_pred EccCCcEEEEEecCceEEEEEccc-----CccccccCCCCCCCcccCeeEEEEeCCCcEEEEee-cCCcEEEEEccCCCC
Q psy14906 420 ITHCGNFVLIGYSSGHVDRFNIQS-----GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQTGK 493 (583)
Q Consensus 420 ~s~~~~~l~~~~~dg~i~i~d~~~-----~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~ 493 (583)
+.++|++..+ .++.|.++|..+ .+....+ .-......+.++|||++++.++ .+.++.|.|+.+...
T Consensus 284 ~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yI------PVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~ 355 (635)
T PRK02888 284 AVKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYV------PVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDD 355 (635)
T ss_pred hhhCCCEEEE--CCCEEEEEECCccccCCcceEEEE------ECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhh
Confidence 4557777766 367899999887 3344444 3445677899999999876655 588999999987521
Q ss_pred ----------CceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccc----------cceEEeeccccccee-----
Q psy14906 494 ----------PPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT----------CTIIRKLSGHMGQLT----- 548 (583)
Q Consensus 494 ----------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~----------~~~~~~~~~h~~~v~----- 548 (583)
......+........+|.++|....+-.-|..|..||+.. ...+.++.-|-.+-.
T Consensus 356 ~~~~~~~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~ 435 (635)
T PRK02888 356 LFDGKIKPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASM 435 (635)
T ss_pred hhhccCCccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecC
Confidence 1234445555677889999999888889999999999976 344455544433221
Q ss_pred eEEecCCCcEEEEEe
Q psy14906 549 DADFSPDSRWLITAS 563 (583)
Q Consensus 549 ~l~~s~d~~~l~s~~ 563 (583)
.=.-.|||++|++..
T Consensus 436 g~t~~~dgk~l~~~n 450 (635)
T PRK02888 436 GETKEADGKWLVSLN 450 (635)
T ss_pred CCcCCCCCCEEEEcc
Confidence 112356788887753
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.3e-07 Score=89.02 Aligned_cols=183 Identities=14% Similarity=0.230 Sum_probs=133.7
Q ss_pred CCCCeEEEEeeC-eEEEEEcCCeEEEEeccceeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeecc
Q psy14906 72 HEDDITCLSSDF-FHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFD 150 (583)
Q Consensus 72 h~~~v~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 150 (583)
-.+.++|+++.+ .++.|..+|.|++.+.++.. .+...|+.. ..+|.|++||+.||+|.|-.+-+.+...++.
T Consensus 38 ~~D~is~~av~~~~~~~GtH~g~v~~~~~~~~~-~~~~~~s~~----~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-- 110 (846)
T KOG2066|consen 38 QNDAISCCAVHDKFFALGTHRGAVYLTTCQGNP-KTNFDHSSS----ILEGEYVASCSDDGKVVIGSLFTDDEITQYD-- 110 (846)
T ss_pred hhhHHHHHHhhcceeeeccccceEEEEecCCcc-ccccccccc----ccCCceEEEecCCCcEEEeeccCCccceeEe--
Confidence 355678888866 56667788999999988876 555555554 5689999999999999999999988888775
Q ss_pred CCceEEecccCCcceEEEeeCCC-----CCEEEEEecCCeEEEEEccC--CceeEEEeccCCCeEEEEEecCCCCEEEEE
Q psy14906 151 NDTFKIMGKRWNSCVNVLEPSPV-----VDIIGVGLSNKKIILHNILT--DESLMEFIQTWGPVTALSFRTDGPPMMVSG 223 (583)
Q Consensus 151 ~~~~~~~~~~~~~~i~~~~~s~~-----~~~l~~~~~d~~i~iw~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 223 (583)
...++.+++++|+ .+.+++|+..| +.++.-.- .+.-..+....++|.++.|..+ ++|-+
T Consensus 111 ----------f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~g~---lIAWa 176 (846)
T KOG2066|consen 111 ----------FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWRGN---LIAWA 176 (846)
T ss_pred ----------cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEecCc---EEEEe
Confidence 4688999999998 56889998888 77765321 1111234555689999999754 77777
Q ss_pred cCCCcEEEEeCCCCeehhhhhhcccc-----ceEEEEEecCCCEEEEEeCCCeEEEEEcc
Q psy14906 224 SNTGHLTVWNLEDRQVENQIKKAHRK-----VVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 224 ~~dg~i~vwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 278 (583)
+.+| |++||..+++.+..+...+.. ....+.|.++.+ |+.| ..-+|++..+.
T Consensus 177 nd~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~-LVIG-W~d~v~i~~I~ 233 (846)
T KOG2066|consen 177 NDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDR-LVIG-WGDSVKICSIK 233 (846)
T ss_pred cCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCe-EEEe-cCCeEEEEEEe
Confidence 7665 999999998887777444422 234577876654 4444 44568888665
|
|
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=0.00022 Score=71.12 Aligned_cols=499 Identities=11% Similarity=0.065 Sum_probs=259.1
Q ss_pred ceeeeeeeeeeecCcccEEEEEeCCCceEEEEe---eCCeEEEEecCCc---EEEeecCCCCCCeEEEE--eeC---eEE
Q psy14906 18 IFLRHRALGYVSNHLPVVARFIRRRKETLFVTC---VGKAFHVYGCNHF---KLLSVSPQHEDDITCLS--SDF---FHI 86 (583)
Q Consensus 18 ~~~~~~~~g~~~~~~~~~~~~~p~~~~~~i~~~---~~~~i~v~d~~~~---~~~~~~~~h~~~v~~~~--~~~---~~~ 86 (583)
+.+.|.-+|.+..-.. +..-.++...+++++ .++++++.-..=+ ...-.++| -..+..+. ++. .++
T Consensus 346 ilet~~NLgPI~Dm~V--vd~d~q~q~qivtCsGa~kdgSLRiiRngi~I~e~A~i~l~G-ikg~w~lk~~v~~~~d~yl 422 (1096)
T KOG1897|consen 346 ILETFVNLGPIVDMCV--VDLDRQGQGQIVTCSGAFKDGSLRIIRNGIGIDELASIDLPG-IKGMWSLKSMVDENYDNYL 422 (1096)
T ss_pred hhhhcccccceeeEEE--EeccccCCceEEEEeCCCCCCcEEEEecccccceeeEeecCC-ccceeEeeccccccCCcEE
Confidence 5566666665444322 222223667777766 5888888753211 11223455 44455555 221 366
Q ss_pred EEEcCCeEEEEeccceeeeee-cccCccEEEE---ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCC
Q psy14906 87 YTSANNIIYAWRRGIDIVGTY-KGHTSPVHLI---LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN 162 (583)
Q Consensus 87 ~~~~~~~i~vw~~~~~~~~~~-~~h~~~v~~i---s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (583)
..+.-+.-++..++++...+. .+.......+ .-.|+.|+=.. ...|++.+-. ..+.... ..
T Consensus 423 vlsf~~eTrvl~i~~e~ee~~~~gf~~~~~Tif~S~i~g~~lvQvT-s~~iRl~ss~--~~~~~W~------------~p 487 (1096)
T KOG1897|consen 423 VLSFISETRVLNISEEVEETEDPGFSTDEQTIFCSTINGNQLVQVT-SNSIRLVSSA--GLRSEWR------------PP 487 (1096)
T ss_pred EEEeccceEEEEEccceEEeccccccccCceEEEEccCCceEEEEe-cccEEEEcch--hhhhccc------------CC
Confidence 666555556666655422111 1111111111 23334433332 2346666644 1222221 23
Q ss_pred cceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEe--ccCCCeEEEEEecC--CCC---EEEEEcCCCcEEEEe-C
Q psy14906 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI--QTWGPVTALSFRTD--GPP---MMVSGSNTGHLTVWN-L 234 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~--~~~---~l~s~~~dg~i~vwd-~ 234 (583)
..++....+.+...++.++.++.+...++..+. ++... .-...|.|+.++|- ++. +++.|..+..+.+.- .
T Consensus 488 ~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~-l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~ 566 (1096)
T KOG1897|consen 488 GKITIGVVSANASQVVVAGGGLALFYLEIEDGG-LREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFL 566 (1096)
T ss_pred CceEEEEEeecceEEEEecCccEEEEEEeeccc-eeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEEC
Confidence 344445555566677777777777777776554 32222 22368999999975 333 788888776654432 2
Q ss_pred CCCeehhhhh-h--ccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEE
Q psy14906 235 EDRQVENQIK-K--AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL 311 (583)
Q Consensus 235 ~~~~~~~~~~-~--~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 311 (583)
.+...+.... . .-...|.-..+-.|..+|.++..||.+.-+.++..++.....+...-...|+.--.|+......++
T Consensus 567 pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vf 646 (1096)
T KOG1897|consen 567 PDLILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVF 646 (1096)
T ss_pred CCcceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEE
Confidence 2222222110 1 123345556666678899999999999999888765443333333334556666677754444444
Q ss_pred EeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEee
Q psy14906 312 SAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWS 391 (583)
Q Consensus 312 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 391 (583)
++ .|+-..+|..+..-....+..... ....+. ........++.. ..+.+.+..
T Consensus 647 a~-sdrP~viY~~n~kLv~spls~kev-----------------~~~c~f--------~s~a~~d~l~~~-~~~~l~i~t 699 (1096)
T KOG1897|consen 647 AL-SDRPTVIYSSNGKLVYSPLSLKEV-----------------NHMCPF--------NSDAYPDSLASA-NGGALTIGT 699 (1096)
T ss_pred Ee-CCCCEEEEecCCcEEEeccchHHh-----------------hhhccc--------ccccCCceEEEe-cCCceEEEE
Confidence 44 455555555433322222111100 000000 001111122222 222333333
Q ss_pred cCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec-----------C---ceEEEEEcccCccccccCCCCCCC
Q psy14906 392 FYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS-----------S---GHVDRFNIQSGAHRGSYGHDNQPG 457 (583)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----------d---g~i~i~d~~~~~~~~~~~~~~~~~ 457 (583)
++.-+.......+.. ..+..+++.+...++++.+. . ..++++|-.+.+......... ..
T Consensus 700 id~iqkl~irtvpl~------~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~~-~E 772 (1096)
T KOG1897|consen 700 IDEIQKLHIRTVPLG------ESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLSSHEFER-NE 772 (1096)
T ss_pred ecchhhcceeeecCC------CChhheEecccceEEEEEecccccchhhcCCcceEEEEEEecCCceeEEeeccccc-cc
Confidence 322111111111111 34556666664444444322 1 236666666655544332110 11
Q ss_pred cccCeeEEEEeCC-CcEEEEeec----------CCcEEEEEccC-CCCCceEEeeccCCeeeEEeccCCcEEEEEeCCce
Q psy14906 458 HVGGVRGVVSDNL-NQIVISGGN----------DQTVKVWHFKQ-TGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFT 525 (583)
Q Consensus 458 h~~~v~~~~~s~~-~~~l~s~~~----------dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 525 (583)
-...+.+..|..| +.+++.|.. .|.|.++.... +..+.+......+.+.++..- +|++||. -...
T Consensus 773 ~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~f-ngkllA~--In~~ 849 (1096)
T KOG1897|consen 773 TALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETVVKGAVYALVEF-NGKLLAG--INQS 849 (1096)
T ss_pred eeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeeeeccceeehhhh-CCeEEEe--cCcE
Confidence 2234555568777 667776642 57888888877 322333444445566655433 5677664 3458
Q ss_pred EEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEe
Q psy14906 526 VNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 526 i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~ 572 (583)
|++|+..+.+.++.-..|..++..+...-.|..++.|.--+.+.+-.
T Consensus 850 vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~ 896 (1096)
T KOG1897|consen 850 VRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQ 896 (1096)
T ss_pred EEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEE
Confidence 99999999988877778889999999999999999998777665543
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.7e-06 Score=83.95 Aligned_cols=198 Identities=16% Similarity=0.213 Sum_probs=137.7
Q ss_pred CeEEEEeeC-eEEEEEcCCeEEEEeccceeeeeecccCcc-EEEE-ccCC-CEEEEEeCCC-----cEEEEEcCCC----
Q psy14906 75 DITCLSSDF-FHIYTSANNIIYAWRRGIDIVGTYKGHTSP-VHLI-LPFG-PHLISVDEES-----NVKVWDIKAE---- 141 (583)
Q Consensus 75 ~v~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~-v~~i-s~~~-~~l~s~~~dg-----~i~iwd~~~~---- 141 (583)
.|+|++..+ .++.++.+|.|.+.+...+.++.++.+... |..+ .-++ .+|++.+.|+ .|+||+++.-
T Consensus 27 ~isc~~s~~~~vvigt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~ 106 (933)
T KOG2114|consen 27 AISCCSSSTGSVVIGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNN 106 (933)
T ss_pred ceeEEcCCCceEEEeeccccEEEecccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCC
Confidence 788888754 677888999999999888888889998888 5555 4444 6888877764 4999998753
Q ss_pred --cEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEcc----CCceeEEEeccCCCeEEEEEecC
Q psy14906 142 --ETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNIL----TDESLMEFIQTWGPVTALSFRTD 215 (583)
Q Consensus 142 --~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~----~~~~~~~~~~~~~~v~~~~~~~~ 215 (583)
+++......+..+ +....++.+++.+.+-+.+|+|..+|.|..+.-. .|....-......+|+.+++..+
T Consensus 107 sP~c~~~~ri~~~~n----p~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d 182 (933)
T KOG2114|consen 107 SPQCLYEHRIFTIKN----PTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSD 182 (933)
T ss_pred CcceeeeeeeeccCC----CCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecC
Confidence 2332222111111 1346789999999999999999999999988532 11111112233489999999999
Q ss_pred CCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEcc
Q psy14906 216 GPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 216 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 278 (583)
+...+++++. ..|.+|.+....+.......|...+.|..+++....+++++. ..+.+|+.+
T Consensus 183 ~~s~lFv~Tt-~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~sd 243 (933)
T KOG2114|consen 183 GKSVLFVATT-EQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDSD 243 (933)
T ss_pred CceeEEEEec-ceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecC-ceEEEEcCC
Confidence 9853444443 479999998544333322677889999999887765666654 458889544
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=9.2e-09 Score=99.15 Aligned_cols=221 Identities=11% Similarity=0.145 Sum_probs=153.7
Q ss_pred ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC-
Q psy14906 239 VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS- 317 (583)
Q Consensus 239 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg- 317 (583)
....+ ..|....+|++|+-+.++|+.|+..|.|++++++ .+.......+|..+|+.+.-+. +|..+++.+.-.
T Consensus 1093 ~w~~f-rd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~----sG~~e~s~ncH~SavT~vePs~-dgs~~Ltsss~S~ 1166 (1516)
T KOG1832|consen 1093 SWRSF-RDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVS----SGSMEESVNCHQSAVTLVEPSV-DGSTQLTSSSSSS 1166 (1516)
T ss_pred cchhh-hccccceeeEEeecCCceEEeeeccceEEEEEcc----CccccccccccccccccccccC-CcceeeeeccccC
Confidence 44556 6788899999999999999999999999999876 5566677889999999999885 777766655422
Q ss_pred -cEEEEEcccc-ccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcc
Q psy14906 318 -TLRIFNTKSE-TSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKS 395 (583)
Q Consensus 318 -~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 395 (583)
-..+|++..- .....+
T Consensus 1167 PlsaLW~~~s~~~~~Hsf-------------------------------------------------------------- 1184 (1516)
T KOG1832|consen 1167 PLSALWDASSTGGPRHSF-------------------------------------------------------------- 1184 (1516)
T ss_pred chHHHhccccccCccccc--------------------------------------------------------------
Confidence 3567776531 111111
Q ss_pred cccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEE
Q psy14906 396 KMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI 475 (583)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 475 (583)
..-.++.|+..-..-++|+......+||++++....++-... .+.+..-++..|+|+.++++
T Consensus 1185 -----------------~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~-~~~~y~~n~a~FsP~D~LIl 1246 (1516)
T KOG1832|consen 1185 -----------------DEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDT-VTSSYSNNLAHFSPCDTLIL 1246 (1516)
T ss_pred -----------------cccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcc-hhhhhhccccccCCCcceEe
Confidence 234466777666666677777779999999999888753221 12333447889999998776
Q ss_pred EeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCC
Q psy14906 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPD 555 (583)
Q Consensus 476 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d 555 (583)
.|| .+||.+.. +.+..+..-..-..-.|+|.|..++.-+ .|||+++.+++.....-. =..+.|+..
T Consensus 1247 ---ndG--vLWDvR~~--~aIh~FD~ft~~~~G~FHP~g~eVIINS-----EIwD~RTF~lLh~VP~Ld--qc~VtFNst 1312 (1516)
T KOG1832|consen 1247 ---NDG--VLWDVRIP--EAIHRFDQFTDYGGGGFHPSGNEVIINS-----EIWDMRTFKLLHSVPSLD--QCAVTFNST 1312 (1516)
T ss_pred ---eCc--eeeeeccH--HHHhhhhhheecccccccCCCceEEeec-----hhhhhHHHHHHhcCcccc--ceEEEeccC
Confidence 455 37999887 6666655444344457999999888855 599999988776554321 244566666
Q ss_pred CcEE
Q psy14906 556 SRWL 559 (583)
Q Consensus 556 ~~~l 559 (583)
|..+
T Consensus 1313 G~Vm 1316 (1516)
T KOG1832|consen 1313 GDVM 1316 (1516)
T ss_pred ccch
Confidence 6544
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.6e-07 Score=91.17 Aligned_cols=179 Identities=14% Similarity=0.228 Sum_probs=138.5
Q ss_pred CCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeCeEEE-EEcCCeEEEEec-cceeeeeecccCccEEEEcc
Q psy14906 42 RKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIY-TSANNIIYAWRR-GIDIVGTYKGHTSPVHLILP 119 (583)
Q Consensus 42 ~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~~~~~i~vw~~-~~~~~~~~~~h~~~v~~is~ 119 (583)
+...++.++--+.+..+|+.+.+..+...-....|+-|..+++++. |...|+|.+-|. ..+.++++..|++.|..+.-
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv 225 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV 225 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcCceeeeeeccccceeeeec
Confidence 4556676666777888899998888777656666888888876555 557899999997 46899999999999999999
Q ss_pred CCCEEEEEeC---------CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCC-CCEEEEEecCCeEEEE
Q psy14906 120 FGPHLISVDE---------ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV-VDIIGVGLSNKKIILH 189 (583)
Q Consensus 120 ~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~d~~i~iw 189 (583)
.|+.|+++|. |..|+|||++..+.+.-+.+. . .-.-+.|.|. ...+|+++..|...+-
T Consensus 226 ~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~-----------~-~P~flrf~Psl~t~~~V~S~sGq~q~v 293 (1118)
T KOG1275|consen 226 QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFP-----------Y-GPQFLRFHPSLTTRLAVTSQSGQFQFV 293 (1118)
T ss_pred cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccc-----------c-CchhhhhcccccceEEEEecccceeec
Confidence 9999999875 556899999988777666532 1 2255778885 4578889999999999
Q ss_pred EccCC-ce---eEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q psy14906 190 NILTD-ES---LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWN 233 (583)
Q Consensus 190 ~~~~~-~~---~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 233 (583)
|..+. .+ +..+......+..++++++++ .++.|..+|.|.+|-
T Consensus 294 d~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~-alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 294 DTATLSNPPAGVKMVNPNGSGISAFDISSNGD-ALAFGDHEGHVNLWA 340 (1118)
T ss_pred cccccCCCccceeEEccCCCcceeEEecCCCc-eEEEecccCcEeeec
Confidence 84321 22 223333434599999999999 899999999999997
|
|
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=1.1e-06 Score=77.50 Aligned_cols=148 Identities=16% Similarity=0.154 Sum_probs=101.2
Q ss_pred cCCcceEEEeeCCCCC-EEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 160 RWNSCVNVLEPSPVVD-IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
.+...|..++|||..+ ++..++-+..|.|.|+++...+..+..+ ..+++++|.-|..++++.|..+|.|.+||++..+
T Consensus 191 ~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 191 GEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred ccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCC
Confidence 7889999999999887 7888999999999999999999999999 8999999999988899999999999999998653
Q ss_pred -ehhhhhhc--cccceEEEEEec------CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCE
Q psy14906 239 -VENQIKKA--HRKVVTGAHFLY------NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN 309 (583)
Q Consensus 239 -~~~~~~~~--~~~~v~~~~~~~------~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 309 (583)
.+..+ .+ ...+|..++.-+ .|.+|+....+ +..|++....+...++..+. ..+...++.+.+.....
T Consensus 270 ~~~~e~-~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele-~pG~cismqy~~~snh~ 345 (463)
T KOG1645|consen 270 GPLMEL-VANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELE-PPGICISMQYHGVSNHL 345 (463)
T ss_pred chHhhh-hhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccC-CCcceeeeeecCccceE
Confidence 23333 22 234555544432 34444444432 56775544433333333222 23444556665533333
Q ss_pred EEE
Q psy14906 310 ILS 312 (583)
Q Consensus 310 l~~ 312 (583)
|++
T Consensus 346 l~t 348 (463)
T KOG1645|consen 346 LLT 348 (463)
T ss_pred EEE
Confidence 333
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.8e-05 Score=77.71 Aligned_cols=200 Identities=11% Similarity=0.084 Sum_probs=111.4
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceE--EEeeCCCCCEEEEEecCCeEEEEEccCCceeE
Q psy14906 121 GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVN--VLEPSPVVDIIGVGLSNKKIILHNILTDESLM 198 (583)
Q Consensus 121 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~ 198 (583)
+..++.++.++.|.-.|..+|+.+.+........ .....+. .++.. ++..++.++.++.|.-+|.++|+.+.
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~-----~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W 134 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPAD-----RGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVW 134 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCcc-----ccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEee
Confidence 4556667778999999999999888776421100 0000000 01111 23678888899999999999999998
Q ss_pred EEeccCCC-----e-EEEEEecCCCCEEEEEc---------CCCcEEEEeCCCCeehhhhhhcccc--------------
Q psy14906 199 EFIQTWGP-----V-TALSFRTDGPPMMVSGS---------NTGHLTVWNLEDRQVENQIKKAHRK-------------- 249 (583)
Q Consensus 199 ~~~~~~~~-----v-~~~~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~~~-------------- 249 (583)
++...... + ....+. ++ +++.++ .+|.+..+|..+|+.+.........
T Consensus 135 ~~~~~~~~~~~~~i~ssP~v~-~~--~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~ 211 (488)
T cd00216 135 KFGNNDQVPPGYTMTGAPTIV-KK--LVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMW 211 (488)
T ss_pred eecCCCCcCcceEecCCCEEE-CC--EEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCccee
Confidence 88754221 1 112222 23 455554 3678999999999877665221110
Q ss_pred -----ce-EEEEEecCCCEEEEEeCCC------------------eEEEEEccCCCCCceeeEEeccCCC----CCeeEE
Q psy14906 250 -----VV-TGAHFLYNEPLLVTSSPDN------------------TLKLWIFDKADGNGRLLRIREGHSA----PPNYIQ 301 (583)
Q Consensus 250 -----~v-~~~~~~~~~~~l~s~~~d~------------------~i~~w~~~~~~~~~~~~~~~~~~~~----~v~~~~ 301 (583)
.+ ...++.+.+..++.++.++ .+.-. +..+++..-......|.. ......
T Consensus 212 ~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Al--d~~tG~~~W~~~~~~~~~~~~~~~s~p~ 289 (488)
T cd00216 212 GPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVAL--DADTGKVKWFYQTTPHDLWDYDGPNQPS 289 (488)
T ss_pred cCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEE--cCCCCCEEEEeeCCCCCCcccccCCCCe
Confidence 01 1234445556677776554 34444 444333222222222211 001111
Q ss_pred Eee---CCCC---EEEEeeCCCcEEEEEccccccce
Q psy14906 302 FYG---NSSD---NILSAAGDSTLRIFNTKSETSNK 331 (583)
Q Consensus 302 ~~~---~~~~---~l~~~~~dg~i~iwd~~~~~~~~ 331 (583)
+.+ .++. .++.++.+|.+...|.++++.+-
T Consensus 290 ~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W 325 (488)
T cd00216 290 LADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLIS 325 (488)
T ss_pred EEeccccCCCeeEEEEEECCCceEEEEECCCCcEee
Confidence 110 1232 57778888999999998887643
|
The alignment model contains an 8-bladed beta-propeller. |
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.2e-08 Score=98.45 Aligned_cols=257 Identities=13% Similarity=0.115 Sum_probs=169.7
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCC-cEEEEeCCC-C
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTG-HLTVWNLED-R 237 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg-~i~vwd~~~-~ 237 (583)
.+....+|++|+.+.+.|++|+..|.|+++++.+|........|...|+.+.=+.||..+|.+++... ...+|++.+ +
T Consensus 1099 d~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~~ 1178 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASSTG 1178 (1516)
T ss_pred ccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhcccccc
Confidence 77889999999999999999999999999999999999999999999999999999984444444433 578999864 3
Q ss_pred eehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEE-ecc---CCCCCeeEEEeeCCCCEEEEe
Q psy14906 238 QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI-REG---HSAPPNYIQFYGNSSDNILSA 313 (583)
Q Consensus 238 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~-~~~---~~~~v~~~~~~~~~~~~l~~~ 313 (583)
...+++ ..-.++.|+.....-+.|.......+||+... ..+.+ +.+ ..-.-+...|+| +..+++
T Consensus 1179 ~~~Hsf-----~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~----~~l~tylt~~~~~~y~~n~a~FsP-~D~LIl-- 1246 (1516)
T KOG1832|consen 1179 GPRHSF-----DEDKAVKFSNSLQFRALGTEADDALLYDVQTC----SPLQTYLTDTVTSSYSNNLAHFSP-CDTLIL-- 1246 (1516)
T ss_pred Cccccc-----cccceeehhhhHHHHHhcccccceEEEecccC----cHHHHhcCcchhhhhhccccccCC-CcceEe--
Confidence 444444 23356778766544444555556889976532 22222 111 112226778887 455554
Q ss_pred eCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecC
Q psy14906 314 AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFY 393 (583)
Q Consensus 314 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 393 (583)
+|| .+||++..+.++.+..-
T Consensus 1247 -ndG--vLWDvR~~~aIh~FD~f--------------------------------------------------------- 1266 (1516)
T KOG1832|consen 1247 -NDG--VLWDVRIPEAIHRFDQF--------------------------------------------------------- 1266 (1516)
T ss_pred -eCc--eeeeeccHHHHhhhhhh---------------------------------------------------------
Confidence 344 47998876554443110
Q ss_pred cccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcE
Q psy14906 394 KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQI 473 (583)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 473 (583)
..-..=.|+|.|..+++-+ .|||+++.+.++..+. -.-..+.|+..|..
T Consensus 1267 -------------------t~~~~G~FHP~g~eVIINS-----EIwD~RTF~lLh~VP~-------Ldqc~VtFNstG~V 1315 (1516)
T KOG1832|consen 1267 -------------------TDYGGGGFHPSGNEVIINS-----EIWDMRTFKLLHSVPS-------LDQCAVTFNSTGDV 1315 (1516)
T ss_pred -------------------eecccccccCCCceEEeec-----hhhhhHHHHHHhcCcc-------ccceEEEeccCccc
Confidence 0011224788888888764 4899999888776632 12345677777765
Q ss_pred EEEee--cC---------------CcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEe
Q psy14906 474 VISGG--ND---------------QTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCL 521 (583)
Q Consensus 474 l~s~~--~d---------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 521 (583)
++..- .| ...+-++.... ..+.++....++..++-+|...++++-.
T Consensus 1316 mYa~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~dY--s~iaTi~v~R~~~Dlct~~~D~~l~vIe 1378 (1516)
T KOG1832|consen 1316 MYAMLNIEDVMSDVHTRRVKHPLFSSFRTFDAIDY--SDIATIPVDRCLLDLCTEPTDSFLGVIE 1378 (1516)
T ss_pred hhhhhhhhhhhhhhcccccccchhhhhcccccccc--ccceeeecccchhhhhcCCccceEEEEe
Confidence 44322 00 12333444444 6667777777888888888888887754
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=4.2e-08 Score=84.25 Aligned_cols=147 Identities=17% Similarity=0.192 Sum_probs=110.2
Q ss_pred EEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCC-----ceeEE
Q psy14906 125 ISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD-----ESLME 199 (583)
Q Consensus 125 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-----~~~~~ 199 (583)
++.+.+..+-+-|+++|....- ...+.|.++.|...++++..|..+|.|..+|++.+ .+...
T Consensus 228 fs~G~sqqv~L~nvetg~~qsf-------------~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~r 294 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQQSF-------------QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQR 294 (425)
T ss_pred ecccccceeEEEEeeccccccc-------------ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEE
Confidence 5556677788888887643221 34678999999999999999999999999999865 33333
Q ss_pred EeccCCCeEEEEEec-CCCCEEEEEcCCCcEEEEeCCCCee---hhhhhhccccceEEE--EEecCCCEEEEEeCCCeEE
Q psy14906 200 FIQTWGPVTALSFRT-DGPPMMVSGSNTGHLTVWNLEDRQV---ENQIKKAHRKVVTGA--HFLYNEPLLVTSSPDNTLK 273 (583)
Q Consensus 200 ~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~---~~~~~~~~~~~v~~~--~~~~~~~~l~s~~~d~~i~ 273 (583)
+ .|...|+++.... +++ .|.+.+.+|+|++||++--++ +.++ .+|...-.-+ ...+.+..+++++.|...+
T Consensus 295 l-yh~Ssvtslq~Lq~s~q-~LmaS~M~gkikLyD~R~~K~~~~V~qY-eGHvN~~a~l~~~v~~eeg~I~s~GdDcytR 371 (425)
T KOG2695|consen 295 L-YHDSSVTSLQILQFSQQ-KLMASDMTGKIKLYDLRATKCKKSVMQY-EGHVNLSAYLPAHVKEEEGSIFSVGDDCYTR 371 (425)
T ss_pred E-EcCcchhhhhhhccccc-eEeeccCcCceeEeeehhhhcccceeee-ecccccccccccccccccceEEEccCeeEEE
Confidence 3 5668999998877 555 788888999999999987666 6677 6776533332 3356677888999999999
Q ss_pred EEEccCCCCCceeeEEec
Q psy14906 274 LWIFDKADGNGRLLRIRE 291 (583)
Q Consensus 274 ~w~~~~~~~~~~~~~~~~ 291 (583)
+|.++ .+.++.++.
T Consensus 372 iWsl~----~ghLl~tip 385 (425)
T KOG2695|consen 372 IWSLD----SGHLLCTIP 385 (425)
T ss_pred EEecc----cCceeeccC
Confidence 99776 456666554
|
|
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=98.72 E-value=3e-05 Score=76.18 Aligned_cols=106 Identities=8% Similarity=-0.057 Sum_probs=68.9
Q ss_pred EEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEE-----------------eecCCcEEEEEc
Q psy14906 426 FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS-----------------GGNDQTVKVWHF 488 (583)
Q Consensus 426 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s-----------------~~~dg~i~iwd~ 488 (583)
.+++++.+|.++.+|..+|+.+...... ...++.+| +..++. ...+|.+.-.|.
T Consensus 303 ~V~~g~~~G~l~ald~~tG~~~W~~~~~--------~~~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~ 373 (488)
T cd00216 303 AIVHAPKNGFFYVLDRTTGKLISARPEV--------EQPMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDP 373 (488)
T ss_pred EEEEECCCceEEEEECCCCcEeeEeEee--------ccccccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeC
Confidence 6788889999999999999988765211 11123333 221111 123567888888
Q ss_pred cCCCCCceEEeecc---------CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecc
Q psy14906 489 KQTGKPPLRSIKLD---------NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG 542 (583)
Q Consensus 489 ~~~~~~~~~~~~~~---------~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 542 (583)
.++ +.+...... .+...-...-.+..|++++.||.++.+|.++|+.+.+++-
T Consensus 374 ~tG--~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 374 KTG--KVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred CCC--cEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence 887 666555443 1111111122567889999999999999999999987764
|
The alignment model contains an 8-bladed beta-propeller. |
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.70 E-value=5.6e-05 Score=76.82 Aligned_cols=246 Identities=10% Similarity=0.028 Sum_probs=152.6
Q ss_pred CCCCeEEEEe--eC-eEEEEEcCCeEEEEeccceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEE
Q psy14906 72 HEDDITCLSS--DF-FHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLE 146 (583)
Q Consensus 72 h~~~v~~~~~--~~-~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 146 (583)
.++.|.++.| ++ .++.+..+|.|.+-|.....+....--...|.++ |||++.++..+.++++.+-.- +-..+..
T Consensus 67 gd~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~-~f~~i~E 145 (1265)
T KOG1920|consen 67 GDDEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMTK-DFEPIAE 145 (1265)
T ss_pred CCcceEEEEEecccceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEec-cccchhc
Confidence 4468888888 44 6777888999888887665555555566777776 999999999888787766543 1111111
Q ss_pred eec---------------cCCceEEec-------------------ccCCcceEEEeeCCCCCEEEEE-----ecCCeEE
Q psy14906 147 LSF---------------DNDTFKIMG-------------------KRWNSCVNVLEPSPVVDIIGVG-----LSNKKII 187 (583)
Q Consensus 147 ~~~---------------~~~~~~~~~-------------------~~~~~~i~~~~~s~~~~~l~~~-----~~d~~i~ 187 (583)
.++ ......+.| ......=+.+.|--||+++|+. .....|+
T Consensus 146 ~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rkir 225 (1265)
T KOG1920|consen 146 KPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIR 225 (1265)
T ss_pred cccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEE
Confidence 111 000000000 0122233468999999999983 2336899
Q ss_pred EEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEE---cCCCcEEEEeCCC---CeehhhhhhccccceEEEEEecCCC
Q psy14906 188 LHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG---SNTGHLTVWNLED---RQVENQIKKAHRKVVTGAHFLYNEP 261 (583)
Q Consensus 188 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~---~~dg~i~vwd~~~---~~~~~~~~~~~~~~v~~~~~~~~~~ 261 (583)
+||-+ |..-..-....+.-.+++|-|.|. ++++- +.|+.|.+|.-+. ++....+ .....++..++|+.++.
T Consensus 226 V~drE-g~Lns~se~~~~l~~~LsWkPsgs-~iA~iq~~~sd~~IvffErNGL~hg~f~l~~-p~de~~ve~L~Wns~sd 302 (1265)
T KOG1920|consen 226 VYDRE-GALNSTSEPVEGLQHSLSWKPSGS-LIAAIQCKTSDSDIVFFERNGLRHGEFVLPF-PLDEKEVEELAWNSNSD 302 (1265)
T ss_pred Eeccc-chhhcccCcccccccceeecCCCC-eEeeeeecCCCCcEEEEecCCccccccccCC-cccccchheeeecCCCC
Confidence 99976 443333233334556899999998 66664 3456799998653 2222222 22334489999999999
Q ss_pred EEEE---EeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcc
Q psy14906 262 LLVT---SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325 (583)
Q Consensus 262 ~l~s---~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 325 (583)
.|++ ......|++|-+ .+..+.+...+.-..... +.|+|.....|..-..+|...+++..
T Consensus 303 iLAv~~~~~e~~~v~lwt~--~NyhWYLKq~l~~~~~~~--~~W~p~~~~~L~v~~~sG~~~v~~~~ 365 (1265)
T KOG1920|consen 303 ILAVVTSNLENSLVQLWTT--GNYHWYLKQELQFSQKAL--LMWDPVTEKTLHVLRESGQRLVRDFA 365 (1265)
T ss_pred ceeeeecccccceEEEEEe--cCeEEEEEEEEecccccc--ccccCCCceeEEEEecCCcEEEEEEE
Confidence 9888 555566999943 332333333333222222 88988666677766677887777653
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.1e-05 Score=73.89 Aligned_cols=306 Identities=12% Similarity=0.064 Sum_probs=157.2
Q ss_pred CCCCCEEEEEe---------cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehh
Q psy14906 171 SPVVDIIGVGL---------SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN 241 (583)
Q Consensus 171 s~~~~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 241 (583)
|||+++++... ..+.+.+||+++++....... ...+....|+|+|+ .++-.. ++.|.+++..+++..+
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~-~~~~v~-~~nly~~~~~~~~~~~ 77 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGK-YIAFVR-DNNLYLRDLATGQETQ 77 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSST-EEEEEE-TTEEEEESSTTSEEEE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC-ccccccceeecCCC-eeEEEe-cCceEEEECCCCCeEE
Confidence 67888877642 346799999998765544444 47899999999999 444443 5789999987764432
Q ss_pred hhhhcc----------------ccceEEEEEecCCCEEEEEeCC-CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEee
Q psy14906 242 QIKKAH----------------RKVVTGAHFLYNEPLLVTSSPD-NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304 (583)
Q Consensus 242 ~~~~~~----------------~~~v~~~~~~~~~~~l~s~~~d-~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 304 (583)
.-..+. -+.-..+.||||+++|+....| ..++.+.+........ ....+..+.+ |
T Consensus 78 lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~-------~yp~~~~~~Y-P 149 (353)
T PF00930_consen 78 LTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDS-------QYPEVESIRY-P 149 (353)
T ss_dssp SES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTE-------SS-EEEEEE---
T ss_pred eccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccc-------cCCccccccc-C
Confidence 221120 1123568899999998876543 3344332211000000 0012233333 2
Q ss_pred CCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCC
Q psy14906 305 NSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGK 384 (583)
Q Consensus 305 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (583)
.-|..-. .-.+.++|+.+++....- ..
T Consensus 150 k~G~~np----~v~l~v~~~~~~~~~~~~-~~------------------------------------------------ 176 (353)
T PF00930_consen 150 KAGDPNP----RVSLFVVDLASGKTTELD-PP------------------------------------------------ 176 (353)
T ss_dssp BTTS-------EEEEEEEESSSTCCCEE----------------------------------------------------
T ss_pred CCCCcCC----ceEEEEEECCCCcEEEee-ec------------------------------------------------
Confidence 2222211 124566777665432110 00
Q ss_pred ceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec-----CceEEEEEcccCccccccCCCCCCCcc
Q psy14906 385 NKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS-----SGHVDRFNIQSGAHRGSYGHDNQPGHV 459 (583)
Q Consensus 385 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~~h~ 459 (583)
.........+..+.|.++++.+++... ...+.++|..++......... ..+--
T Consensus 177 ---------------------~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~-~~~Wv 234 (353)
T PF00930_consen 177 ---------------------NSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEET-SDGWV 234 (353)
T ss_dssp ---------------------HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEE-SSSSS
T ss_pred ---------------------cccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEec-CCcce
Confidence 000000145778899999884444332 235777788776554333100 01111
Q ss_pred cCeeEEEEe-CCCc-EEEEeecCCcEEEEEccCCCCCceEEeeccCCeee-EEeccCCcEEE-EEeCC----ceEEEEEc
Q psy14906 460 GGVRGVVSD-NLNQ-IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF-FRTHQESSMLA-VCLDD----FTVNIIDI 531 (583)
Q Consensus 460 ~~v~~~~~s-~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~-~~~~d----g~i~i~d~ 531 (583)
..-....+. +++. +|.....||.-+||-++...........+.-.|.. +.++++++.|. ++..+ ..++.-++
T Consensus 235 ~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~ 314 (353)
T PF00930_consen 235 DVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSL 314 (353)
T ss_dssp SSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEET
T ss_pred eeecccccccCCCCEEEEEEEcCCCcEEEEEcccccceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEe
Confidence 222355554 5554 55555577766655554432143333334446644 67888877554 44442 35666666
Q ss_pred cccceEEeecccccceeeEEecCCCcEEEEE
Q psy14906 532 DTCTIIRKLSGHMGQLTDADFSPDSRWLITA 562 (583)
Q Consensus 532 ~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~ 562 (583)
+.+..+..+......-..+.|||++++++-.
T Consensus 315 ~~~~~~~~LT~~~~~~~~~~~Spdg~y~v~~ 345 (353)
T PF00930_consen 315 DSGGEPKCLTCEDGDHYSASFSPDGKYYVDT 345 (353)
T ss_dssp TETTEEEESSTTSSTTEEEEE-TTSSEEEEE
T ss_pred CCCCCeEeccCCCCCceEEEECCCCCEEEEE
Confidence 6334455555433333589999999987743
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=98.69 E-value=2.9e-07 Score=89.50 Aligned_cols=178 Identities=12% Similarity=0.117 Sum_probs=137.0
Q ss_pred eEEEEEcCCeEEEEeccce-eeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCC
Q psy14906 84 FHIYTSANNIIYAWRRGID-IVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN 162 (583)
Q Consensus 84 ~~~~~~~~~~i~vw~~~~~-~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (583)
+++.|+-...+...|..+. ..+...-....|+-+..+++++.+|...|+|.+-|..+.+.++++. .|.
T Consensus 149 ~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~-----------aHs 217 (1118)
T KOG1275|consen 149 TLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETIHTFD-----------AHS 217 (1118)
T ss_pred ceeecchhhheeeeecccceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcCceeeeee-----------ccc
Confidence 4667777777888887553 3344444444577778999999999999999999999999999998 999
Q ss_pred cceEEEeeCCCCCEEEEEec---------CCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q psy14906 163 SCVNVLEPSPVVDIIGVGLS---------NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWN 233 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~~~---------d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 233 (583)
+.|..+.. .|+.|++++. |.-|+|||++..+.+.-+..+.++ .-+.|.|.-...+++++..|...+-|
T Consensus 218 ~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~vd 294 (1118)
T KOG1275|consen 218 GSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFVD 294 (1118)
T ss_pred cceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEEecccceeecc
Confidence 99976554 5889998875 445899999988777766666443 66788898666789999999999998
Q ss_pred C---CCCee-hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEE
Q psy14906 234 L---EDRQV-ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWI 276 (583)
Q Consensus 234 ~---~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~ 276 (583)
. .+... +..+ ......+..++++++++.++.+..+|.|.+|.
T Consensus 295 ~~~lsNP~~~~~~v-~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 295 TATLSNPPAGVKMV-NPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred ccccCCCccceeEE-ccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 3 32211 1112 23345699999999999999999999999995
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.69 E-value=6.4e-08 Score=57.32 Aligned_cols=39 Identities=23% Similarity=0.597 Sum_probs=36.5
Q ss_pred CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q psy14906 194 DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWN 233 (583)
Q Consensus 194 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 233 (583)
++++.++.+|.+.|++++|+|++. +|++++.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~-~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGN-FLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSS-EEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccc-cceeeCCCCEEEEEC
Confidence 467889999999999999999988 999999999999997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=98.68 E-value=2.4e-06 Score=81.96 Aligned_cols=104 Identities=14% Similarity=0.112 Sum_probs=79.4
Q ss_pred CCCcEEEEeecCCcEEEEEccC---CCCCceEEeeccCCeeeEEeccCCcEEEEEeC-CceEEEEEccccce--------
Q psy14906 469 NLNQIVISGGNDQTVKVWHFKQ---TGKPPLRSIKLDNGISFFRTHQESSMLAVCLD-DFTVNIIDIDTCTI-------- 536 (583)
Q Consensus 469 ~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~-------- 536 (583)
++|++... .++.|.+.|..+ .....+..+........+.++|||+++++++. +.++.|+|+++.+.
T Consensus 286 kdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~ 363 (635)
T PRK02888 286 KAGKFKTI--GGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKP 363 (635)
T ss_pred hCCCEEEE--CCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCc
Confidence 45665554 256799999887 11167788888899999999999998877665 78999999987653
Q ss_pred ----EEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCC
Q psy14906 537 ----IRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575 (583)
Q Consensus 537 ----~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~ 575 (583)
..+.+- .......+|.++|....|...|..|-.||+.+
T Consensus 364 ~~~vvaevev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 364 RDAVVAEPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred cceEEEeecc-CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 333332 23345678999999888899999999999976
|
|
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=98.67 E-value=0.0002 Score=70.61 Aligned_cols=112 Identities=12% Similarity=0.038 Sum_probs=70.9
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcce-------EEEeeCCCCCEEEEEecCCeEEEEEccC
Q psy14906 121 GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCV-------NVLEPSPVVDIIGVGLSNKKIILHNILT 193 (583)
Q Consensus 121 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i-------~~~~~s~~~~~l~~~~~d~~i~iw~~~~ 193 (583)
+..|+.++.++.|.-.|.++|+.+.+........ .... ..+++ .+..++.++.++.+.-.|.++
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~-------~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~T 139 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDD-------VIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKT 139 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcc-------cccccccccccccceE--ECCEEEEEcCCCEEEEEECCC
Confidence 5567777778899999999999988876421100 0000 01122 235677788899999999999
Q ss_pred CceeEEEeccC----CCeEEEEEecCCCCEEEEEc------CCCcEEEEeCCCCeehhhh
Q psy14906 194 DESLMEFIQTW----GPVTALSFRTDGPPMMVSGS------NTGHLTVWNLEDRQVENQI 243 (583)
Q Consensus 194 ~~~~~~~~~~~----~~v~~~~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~ 243 (583)
|+.+....... ..+++--.--++ .++.+. .+|.|.-+|.++|+.+-.+
T Consensus 140 Gk~~W~~~~~~~~~~~~~tssP~v~~g--~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~ 197 (527)
T TIGR03075 140 GKVVWSKKNGDYKAGYTITAAPLVVKG--KVITGISGGEFGVRGYVTAYDAKTGKLVWRR 197 (527)
T ss_pred CCEEeecccccccccccccCCcEEECC--EEEEeecccccCCCcEEEEEECCCCceeEec
Confidence 99998765321 012111111144 344443 2688999999999987765
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.1e-06 Score=74.68 Aligned_cols=94 Identities=9% Similarity=0.056 Sum_probs=75.0
Q ss_pred EEEEeCCCCeehhhhhhccccceEEEEEecCCC-EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCC
Q psy14906 229 LTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEP-LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSS 307 (583)
Q Consensus 229 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 307 (583)
+++.+..+.+...-+ ..|...|..++|+|..+ ++..++.+..|+|.|+. ....+..+..+ ..+.+++|.-++.
T Consensus 175 v~~l~~~~fkssq~l-p~~g~~IrdlafSp~~~GLl~~asl~nkiki~dle----t~~~vssy~a~-~~~wSC~wDlde~ 248 (463)
T KOG1645|consen 175 VQKLESHDFKSSQIL-PGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLE----TSCVVSSYIAY-NQIWSCCWDLDER 248 (463)
T ss_pred eEEeccCCcchhhcc-cccchhhhhhccCccccceeeeeccCceEEEEecc----cceeeeheecc-CCceeeeeccCCc
Confidence 666666666665544 68888999999999887 78889999999999775 33444555555 7899999998777
Q ss_pred CEEEEeeCCCcEEEEEccccc
Q psy14906 308 DNILSAAGDSTLRIFNTKSET 328 (583)
Q Consensus 308 ~~l~~~~~dg~i~iwd~~~~~ 328 (583)
.+++.|..+|.|.+||++..+
T Consensus 249 h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 249 HVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred ceeEEeccCceEEEEEccCCC
Confidence 889999999999999998754
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=98.64 E-value=7.5e-05 Score=67.76 Aligned_cols=168 Identities=11% Similarity=-0.006 Sum_probs=79.6
Q ss_pred EcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec---CCeEEEEEccCCceeEEEeccCCCeEEEEEe
Q psy14906 137 DIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS---NKKIILHNILTDESLMEFIQTWGPVTALSFR 213 (583)
Q Consensus 137 d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~ 213 (583)
|..||..+.++.-.... .|.-..+.=+|.+||+.|+.++. ...+.+.|+.+++..+.-.+..........+
T Consensus 16 D~~TG~~VtrLT~~~~~------~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s 89 (386)
T PF14583_consen 16 DPDTGHRVTRLTPPDGH------SHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLS 89 (386)
T ss_dssp -TTT--EEEE-S-TTS-------EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-
T ss_pred CCCCCceEEEecCCCCc------ccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEe
Confidence 56677777776511100 11112222356789987777655 4578888999888776555443334456777
Q ss_pred cCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEe--cCCCEEEEEeC---C-----------------Ce
Q psy14906 214 TDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL--YNEPLLVTSSP---D-----------------NT 271 (583)
Q Consensus 214 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~---d-----------------~~ 271 (583)
|+++ .++-......|+-.|+++.+....+ ......+-...|. .|+..++-.-. | -.
T Consensus 90 ~~~~-~~~Yv~~~~~l~~vdL~T~e~~~vy-~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~ 167 (386)
T PF14583_consen 90 PDDR-ALYYVKNGRSLRRVDLDTLEERVVY-EVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPH 167 (386)
T ss_dssp TTSS-EEEEEETTTEEEEEETTT--EEEEE-E--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---
T ss_pred cCCC-eEEEEECCCeEEEEECCcCcEEEEE-ECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCC
Confidence 8887 5544444568888999987654333 3344444445553 45555443211 1 12
Q ss_pred EEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC
Q psy14906 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 272 i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 315 (583)
.+|..++..+++.+.+. .....+..+.|+|.|...|+.|-+
T Consensus 168 ~~i~~idl~tG~~~~v~---~~~~wlgH~~fsP~dp~li~fCHE 208 (386)
T PF14583_consen 168 CRIFTIDLKTGERKVVF---EDTDWLGHVQFSPTDPTLIMFCHE 208 (386)
T ss_dssp EEEEEEETTT--EEEEE---EESS-EEEEEEETTEEEEEEEEE-
T ss_pred ceEEEEECCCCceeEEE---ecCccccCcccCCCCCCEEEEecc
Confidence 34455555543333222 234567789999977777777654
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.63 E-value=1e-05 Score=77.07 Aligned_cols=162 Identities=15% Similarity=0.116 Sum_probs=108.3
Q ss_pred CCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEe-ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 161 WNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI-QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 161 ~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
+...|.--+++..+++++.|+..|.+++|+-..++....-. +..+.+..+..+++.. ++|.|+..|.|.++-++.+.+
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~-lvAagt~~g~V~v~ql~~~~p 110 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEY-LVAAGTASGRVSVFQLNKELP 110 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhH-hhhhhcCCceEEeehhhccCC
Confidence 34455555667789999999999999999987665544332 3335666677777776 899999999999998876432
Q ss_pred -----hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee
Q psy14906 240 -----ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 240 -----~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 314 (583)
+......|...|++++|++++..+++|...|.|.+-.++....-......+-.....|..+.+. ++..|++..
T Consensus 111 ~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~--q~~LLVStl 188 (726)
T KOG3621|consen 111 RDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL--QSYLLVSTL 188 (726)
T ss_pred CcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc--cceehHhhh
Confidence 2222245788999999999999999999999999987764111111112222345567667665 344444443
Q ss_pred CCCcEEEEEcccc
Q psy14906 315 GDSTLRIFNTKSE 327 (583)
Q Consensus 315 ~dg~i~iwd~~~~ 327 (583)
. .-.+++++.+
T Consensus 189 ~--r~~Lc~tE~e 199 (726)
T KOG3621|consen 189 T--RCILCQTEAE 199 (726)
T ss_pred h--hhheeecchh
Confidence 3 2334555443
|
|
| >KOG1920|consensus | Back alignment and domain information |
|---|
Probab=98.63 E-value=3.1e-05 Score=78.58 Aligned_cols=241 Identities=10% Similarity=0.102 Sum_probs=138.0
Q ss_pred cceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccc
Q psy14906 249 KVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328 (583)
Q Consensus 249 ~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 328 (583)
+.|.++.|..+.+.++.+...|.|.+- +..+..... ...-...|.+++|+| |++.++..+..+++.+-+- +-.
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilv--d~et~~~ei---vg~vd~GI~aaswS~-Dee~l~liT~~~tll~mT~-~f~ 141 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILV--DPETLELEI---VGNVDNGISAASWSP-DEELLALITGRQTLLFMTK-DFE 141 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEE--cccccceee---eeeccCceEEEeecC-CCcEEEEEeCCcEEEEEec-ccc
Confidence 689999999999999999999999998 433322232 333456899999998 8999999888777766432 111
Q ss_pred cceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccccc
Q psy14906 329 SNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCK 408 (583)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 408 (583)
++....... .....+..+..+-+...-.+--...+.........+...
T Consensus 142 ~i~E~~L~~--------------------------------d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~ 189 (1265)
T KOG1920|consen 142 PIAEKPLDA--------------------------------DDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKAL 189 (1265)
T ss_pred chhcccccc--------------------------------ccccccccceecccccceeeecchhhhcccccccccccc
Confidence 111000000 000000011111111000000000000000000000000
Q ss_pred c--cCCCCceEEEEccCCcEEEEE-----ecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee---
Q psy14906 409 Q--AKQSKPTCVYITHCGNFVLIG-----YSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG--- 478 (583)
Q Consensus 409 ~--~~~~~i~~~~~s~~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~--- 478 (583)
. .....-+.++|--||+++++. .....|++||.+ |.+-..- ....+.-.+++|-|.|..+++..
T Consensus 190 ~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~s-----e~~~~l~~~LsWkPsgs~iA~iq~~~ 263 (1265)
T KOG1920|consen 190 EQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTS-----EPVEGLQHSLSWKPSGSLIAAIQCKT 263 (1265)
T ss_pred cchhhccCCceEEEccCCcEEEEEEEeccCCceeEEEeccc-chhhccc-----CcccccccceeecCCCCeEeeeeecC
Confidence 0 011345679999999999983 333789999987 4443332 23444556899999999988764
Q ss_pred cCCcEEEEEccCCCCC-ceEEeecc-CCeeeEEeccCCcEEEE---EeCCceEEEEEcccc
Q psy14906 479 NDQTVKVWHFKQTGKP-PLRSIKLD-NGISFFRTHQESSMLAV---CLDDFTVNIIDIDTC 534 (583)
Q Consensus 479 ~dg~i~iwd~~~~~~~-~~~~~~~~-~~v~~~~~s~~~~~l~~---~~~dg~i~i~d~~~~ 534 (583)
.|+.|.++.-...... ....+..+ .++..++|+.++..||+ ......|++|-+.+.
T Consensus 264 sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Ny 324 (1265)
T KOG1920|consen 264 SDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNY 324 (1265)
T ss_pred CCCcEEEEecCCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCe
Confidence 4567888876543111 11112222 24899999999999998 455566999988764
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=98.62 E-value=8.4e-07 Score=85.31 Aligned_cols=147 Identities=16% Similarity=0.176 Sum_probs=112.6
Q ss_pred ceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCC
Q psy14906 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP 494 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 494 (583)
+.|++++ +++++.|+.+|.|++++....- ...+ .|... ..+|.++++|+.||+|.|-.+.+. +
T Consensus 42 is~~av~--~~~~~~GtH~g~v~~~~~~~~~-~~~~------~~s~~------~~~Gey~asCS~DGkv~I~sl~~~--~ 104 (846)
T KOG2066|consen 42 ISCCAVH--DKFFALGTHRGAVYLTTCQGNP-KTNF------DHSSS------ILEGEYVASCSDDGKVVIGSLFTD--D 104 (846)
T ss_pred HHHHHhh--cceeeeccccceEEEEecCCcc-cccc------ccccc------ccCCceEEEecCCCcEEEeeccCC--c
Confidence 4444443 5799999999999999876443 2222 34433 568999999999999999999988 7
Q ss_pred ceEEeeccCCeeeEEeccC-----CcEEEEEeCCceEEEEEcccc--ceEEeecccccceeeEEecCCCcEEEEEeCCCe
Q psy14906 495 PLRSIKLDNGISFFRTHQE-----SSMLAVCLDDFTVNIIDIDTC--TIIRKLSGHMGQLTDADFSPDSRWLITASMDCT 567 (583)
Q Consensus 495 ~~~~~~~~~~v~~~~~s~~-----~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~ 567 (583)
....+..+.++.+++++|+ .+.+++|+..| +.++.-.=. +.-..+..-.++|.++.|. |+++|=++.+|
T Consensus 105 ~~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~G- 180 (846)
T KOG2066|consen 105 EITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDG- 180 (846)
T ss_pred cceeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCC-
Confidence 8888888899999999998 56889999888 777764311 1111345556899999995 78899888777
Q ss_pred EEEEeCCCccccccc
Q psy14906 568 IRVWDIPSSQLIDCF 582 (583)
Q Consensus 568 i~vw~~~~~~~~~~~ 582 (583)
|+|+|+.+++.+..+
T Consensus 181 v~vyd~~~~~~l~~i 195 (846)
T KOG2066|consen 181 VKVYDTPTRQRLTNI 195 (846)
T ss_pred cEEEeccccceeecc
Confidence 899999998887654
|
|
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=98.62 E-value=0.0002 Score=65.15 Aligned_cols=321 Identities=12% Similarity=0.105 Sum_probs=132.0
Q ss_pred EEccCCceeEEEeccCCCe-----EEEEEecCCCCEEEEEcCCCc--EEEEeCCCCeehhhhhhccccceEEEEEecCCC
Q psy14906 189 HNILTDESLMEFIQTWGPV-----TALSFRTDGPPMMVSGSNTGH--LTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEP 261 (583)
Q Consensus 189 w~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~l~s~~~dg~--i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 261 (583)
-|..||..+.++..+...- +.=+|.+||+.+|+++..+|. +.+.|+.+++..+.- .+.........++|+.+
T Consensus 15 ~D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLT-dg~g~~~~g~~~s~~~~ 93 (386)
T PF14583_consen 15 IDPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLT-DGPGDNTFGGFLSPDDR 93 (386)
T ss_dssp E-TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE----SS-B-TTT-EE-TTSS
T ss_pred eCCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECc-cCCCCCccceEEecCCC
Confidence 3566777777776443222 223678999878887776665 667788887765544 33223333566778888
Q ss_pred EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhh
Q psy14906 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341 (583)
Q Consensus 262 ~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 341 (583)
.++-......++-. +..+.+.+.+.... ...+-...|..+.....+.+.. ........+.. ....
T Consensus 94 ~~~Yv~~~~~l~~v--dL~T~e~~~vy~~p--~~~~g~gt~v~n~d~t~~~g~e---------~~~~d~~~l~~--~~~f 158 (386)
T PF14583_consen 94 ALYYVKNGRSLRRV--DLDTLEERVVYEVP--DDWKGYGTWVANSDCTKLVGIE---------ISREDWKPLTK--WKGF 158 (386)
T ss_dssp EEEEEETTTEEEEE--ETTT--EEEEEE----TTEEEEEEEEE-TTSSEEEEEE---------EEGGG-----S--HHHH
T ss_pred eEEEEECCCeEEEE--ECCcCcEEEEEECC--cccccccceeeCCCccEEEEEE---------EeehhccCccc--cHHH
Confidence 87666555656555 54443444444433 3333344554322222222211 00110000000 0000
Q ss_pred hhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEc
Q psy14906 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYIT 421 (583)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 421 (583)
.+... ..-...+...++.++....... . ...+.-+.|+
T Consensus 159 -----------~e~~~-----------------------a~p~~~i~~idl~tG~~~~v~~--~------~~wlgH~~fs 196 (386)
T PF14583_consen 159 -----------REFYE-----------------------ARPHCRIFTIDLKTGERKVVFE--D------TDWLGHVQFS 196 (386)
T ss_dssp -----------HHHHH-----------------------C---EEEEEEETTT--EEEEEE--E------SS-EEEEEEE
T ss_pred -----------HHHHh-----------------------hCCCceEEEEECCCCceeEEEe--c------CccccCcccC
Confidence 00000 0001122233333322111110 0 1456778889
Q ss_pred cCCc-EEEEEec------CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee-----cCCcEEEEEcc
Q psy14906 422 HCGN-FVLIGYS------SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG-----NDQTVKVWHFK 489 (583)
Q Consensus 422 ~~~~-~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-----~dg~i~iwd~~ 489 (583)
|... +|+.+-+ |..|.+.+.... ....+.. ......+.-=-|.|||..+..-+ .+..|.-+|+.
T Consensus 197 P~dp~li~fCHEGpw~~Vd~RiW~i~~dg~-~~~~v~~---~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~~ 272 (386)
T PF14583_consen 197 PTDPTLIMFCHEGPWDLVDQRIWTINTDGS-NVKKVHR---RMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDPD 272 (386)
T ss_dssp TTEEEEEEEEE-S-TTTSS-SEEEEETTS----EESS------TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-TT
T ss_pred CCCCCEEEEeccCCcceeceEEEEEEcCCC-cceeeec---CCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCCC
Confidence 8654 4444332 224444443332 2222211 11223344456899998765432 24457777887
Q ss_pred CCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCc----------------eEEEEEccccceEEe---------ecccc
Q psy14906 490 QTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDF----------------TVNIIDIDTCTIIRK---------LSGHM 544 (583)
Q Consensus 490 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg----------------~i~i~d~~~~~~~~~---------~~~h~ 544 (583)
+. +....... .....+..++||++++-=+.|. -|++++++.++.... +.+|.
T Consensus 273 t~--~~~~~~~~-p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~ 349 (386)
T PF14583_consen 273 TG--ERRRLMEM-PWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDR 349 (386)
T ss_dssp T----EEEEEEE--SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBS
T ss_pred CC--CceEEEeC-CceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCC
Confidence 76 33332222 3455677788998887633331 567788876654311 12111
Q ss_pred c-ceeeEEecCCCcEEE-EEeCCCeEEEEeCC
Q psy14906 545 G-QLTDADFSPDSRWLI-TASMDCTIRVWDIP 574 (583)
Q Consensus 545 ~-~v~~l~~s~d~~~l~-s~~~d~~i~vw~~~ 574 (583)
. .=....|||||++++ ++...|...||-++
T Consensus 350 q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v~ 381 (386)
T PF14583_consen 350 QVTHPHPSFSPDGKWVLFRSDMEGPPAVYLVE 381 (386)
T ss_dssp STT----EE-TTSSEEEEEE-TTSS-EEEEEE
T ss_pred ccCCCCCccCCCCCEEEEECCCCCCccEEEEe
Confidence 1 124578999999865 55667777776543
|
|
| >PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.2e-05 Score=73.85 Aligned_cols=170 Identities=12% Similarity=0.126 Sum_probs=90.2
Q ss_pred ccCCCEEEEEe---------CCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEE
Q psy14906 118 LPFGPHLISVD---------EESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIIL 188 (583)
Q Consensus 118 s~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~i 188 (583)
|||+++++... ..+.+.++|+.+++...... ....+....|||+|+.+|... ++.|.+
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~------------~~~~~~~~~~sP~g~~~~~v~-~~nly~ 67 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTP------------PPPKLQDAKWSPDGKYIAFVR-DNNLYL 67 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-------------EETTBSEEEE-SSSTEEEEEE-TTEEEE
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcC------------CccccccceeecCCCeeEEEe-cCceEE
Confidence 68888877742 24679999999866543332 246788899999999999885 578999
Q ss_pred EEccCCceeEEEe-cc----------------CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccce
Q psy14906 189 HNILTDESLMEFI-QT----------------WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVV 251 (583)
Q Consensus 189 w~~~~~~~~~~~~-~~----------------~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v 251 (583)
++..+++..+.-. +. -+.-.++-||||++++++.--.+..|..+.+........ .--.+
T Consensus 68 ~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~----~yp~~ 143 (353)
T PF00930_consen 68 RDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDS----QYPEV 143 (353)
T ss_dssp ESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTE----SS-EE
T ss_pred EECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccc----cCCcc
Confidence 9987774432211 20 123467889999995555555556666555431110000 00123
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEe---ccCCCCCeeEEEeeCCCCEEE
Q psy14906 252 TGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIR---EGHSAPPNYIQFYGNSSDNIL 311 (583)
Q Consensus 252 ~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~ 311 (583)
..+.+-. .|.....+++|-++...+....+... ......+..+.|.+ ++..|+
T Consensus 144 ~~~~YPk------~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~-d~~~l~ 199 (353)
T PF00930_consen 144 ESIRYPK------AGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSP-DGKRLW 199 (353)
T ss_dssp EEEE--B------TTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEE-TTEEEE
T ss_pred cccccCC------CCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecC-CCcEEE
Confidence 3444422 23333455555445544333333322 23345677889987 555333
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.4e-05 Score=76.18 Aligned_cols=193 Identities=18% Similarity=0.189 Sum_probs=116.5
Q ss_pred eEEEEeeC-eEEEEEcCCeEEEEeccceeeeeecc-cCccEEE---EccCCCEEEEEeCCCcEEEEEcCCCcEEEEeecc
Q psy14906 76 ITCLSSDF-FHIYTSANNIIYAWRRGIDIVGTYKG-HTSPVHL---ILPFGPHLISVDEESNVKVWDIKAEETYLELSFD 150 (583)
Q Consensus 76 v~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~-h~~~v~~---is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 150 (583)
-+|++..+ .++.|+..|.+++|+..+..++.++. -...+++ ++++..++|.|+..|.|.++-+..+......-+.
T Consensus 38 lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t 117 (726)
T KOG3621|consen 38 LTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVT 117 (726)
T ss_pred EEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeec
Confidence 45666644 56667788999999986654444442 1222222 4899999999999999999988774322211111
Q ss_pred CCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCC----ceeEEEeccCCCeEEEEEecCCCCEEEEEcCC
Q psy14906 151 NDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD----ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT 226 (583)
Q Consensus 151 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 226 (583)
+- ...|...|+|++|++++..+.+|...|+|.+-.+.+. -..+.+....+.|-.+.+... . +|++...
T Consensus 118 ~~-----d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q~-~-LLVStl~- 189 (726)
T KOG3621|consen 118 PC-----DKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQS-Y-LLVSTLT- 189 (726)
T ss_pred cc-----cccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecccc-e-ehHhhhh-
Confidence 11 1257899999999999999999999999999888762 111222233467777777643 2 4444433
Q ss_pred CcEEEEeCCCCeehhhh-hhccccc-eEEEEEecC----CCEEEEEeCCCeEEEEEccC
Q psy14906 227 GHLTVWNLEDRQVENQI-KKAHRKV-VTGAHFLYN----EPLLVTSSPDNTLKLWIFDK 279 (583)
Q Consensus 227 g~i~vwd~~~~~~~~~~-~~~~~~~-v~~~~~~~~----~~~l~s~~~d~~i~~w~~~~ 279 (583)
.-.+++.+.+. +.++ .+...+. -...+|-|. .+-.+.++.-| .|+|..|.
T Consensus 190 -r~~Lc~tE~et-i~QIG~k~R~~~~~~GACF~~g~~~~q~~~IycaRPG-~RlWead~ 245 (726)
T KOG3621|consen 190 -RCILCQTEAET-ITQIGKKPRKSLIDFGACFFPGQCKAQKPQIYCARPG-LRLWEADF 245 (726)
T ss_pred -hhheeecchhH-HHHhcCCCcCCccccceEEeeccccCCCceEEEecCC-CceEEeec
Confidence 24456665443 3333 1111221 234455554 23344444444 69997765
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.4e-05 Score=76.30 Aligned_cols=222 Identities=11% Similarity=0.161 Sum_probs=138.6
Q ss_pred EEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCC-CeeEEEeeCCCCEEEEeeCCCc-----EEEEEccccc
Q psy14906 255 HFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP-PNYIQFYGNSSDNILSAAGDST-----LRIFNTKSET 328 (583)
Q Consensus 255 ~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg~-----i~iwd~~~~~ 328 (583)
+|++.+..++.|+.+|.|.+. +. ..+.+..++.+... |..+ +.-+...+|++.+.|+. +++|+++.-+
T Consensus 30 c~~s~~~~vvigt~~G~V~~L--n~---s~~~~~~fqa~~~siv~~L-~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~ 103 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVIL--NS---SFQLIRGFQAYEQSIVQFL-YILNKQNFLFSVGEDEQGNPVLLKIWDLEKVD 103 (933)
T ss_pred EEcCCCceEEEeeccccEEEe--cc---cceeeehheecchhhhhHh-hcccCceEEEEEeecCCCCceEEEEecccccC
Confidence 467888899999999987777 42 34555667777666 4444 33234468888777654 8899987542
Q ss_pred cceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccccc
Q psy14906 329 SNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCK 408 (583)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 408 (583)
.... |... +..+++.....
T Consensus 104 ~n~s--------------------------P~c~----------------------~~~ri~~~~np------------- 122 (933)
T KOG2114|consen 104 KNNS--------------------------PQCL----------------------YEHRIFTIKNP------------- 122 (933)
T ss_pred CCCC--------------------------ccee----------------------eeeeeeccCCC-------------
Confidence 1110 0000 00111111100
Q ss_pred ccCCCCceEEEEccCCcEEEEEecCceEEEEEccc---CccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEE
Q psy14906 409 QAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQS---GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKV 485 (583)
Q Consensus 409 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~i 485 (583)
....++.+++.+.+-+.+++|..+|.|..+.-.- ......+. .....+|+.+++..+++.++-+..-..|.+
T Consensus 123 -~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~----~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~ 197 (933)
T KOG2114|consen 123 -TNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYS----HRGKEPITGLALRSDGKSVLFVATTEQVML 197 (933)
T ss_pred -CCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeee----ccCCCCceeeEEecCCceeEEEEecceeEE
Confidence 0126788999999999999999999999885321 11111111 344679999999998887433444467999
Q ss_pred EEccCCCCCceEEeecc-CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeec-ccccceeeE
Q psy14906 486 WHFKQTGKPPLRSIKLD-NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLS-GHMGQLTDA 550 (583)
Q Consensus 486 wd~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~h~~~v~~l 550 (583)
|.+.... .....+..+ .+..|..+++....+++++. ..+.+|+.+..++-..+. +|.......
T Consensus 198 y~l~gr~-p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~sd~~~~cfaf~~g~kk~~~~~ 262 (933)
T KOG2114|consen 198 YSLSGRT-PSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDSDGRGPCFAFEVGEKKEMLVF 262 (933)
T ss_pred EEecCCC-cceeeeccCCccceeeecCCCCccEEEecC-ceEEEEcCCCcceeeeecCCCeEEEEEE
Confidence 9999652 234445444 47888888876654555444 369999998777666676 666554433
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=98.57 E-value=4.6e-06 Score=80.81 Aligned_cols=105 Identities=15% Similarity=0.257 Sum_probs=83.7
Q ss_pred EccCCCEEEEEe----CCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEcc
Q psy14906 117 ILPFGPHLISVD----EESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNIL 192 (583)
Q Consensus 117 is~~~~~l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~ 192 (583)
.+|...++|.++ ..|.|.|+- ++|++-.... ..-.+++++|+|..-.|+.|-.-|.+.+|...
T Consensus 23 WHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt------------~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~ 89 (1416)
T KOG3617|consen 23 WHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVT------------YPVHATSLCWHPEEFVLAQGWEMGVSDVQKTN 89 (1416)
T ss_pred cCCCCceeEEEEecCCCCceEEEEe-cCCCCCcccc------------cceehhhhccChHHHHHhhccccceeEEEecC
Confidence 367777777764 357888885 5566433332 12345679999999999999999999999988
Q ss_pred CCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q psy14906 193 TDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 193 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 235 (583)
+.+.-.....|+.++..+.||++|. .++++..-|.+.+|...
T Consensus 90 ~~e~htv~~th~a~i~~l~wS~~G~-~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 90 TTETHTVVETHPAPIQGLDWSHDGT-VLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred CceeeeeccCCCCCceeEEecCCCC-eEEEcCCCceeEEEEee
Confidence 7766666678999999999999999 89999999999999876
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=98.54 E-value=9.9e-05 Score=70.20 Aligned_cols=231 Identities=13% Similarity=0.115 Sum_probs=128.7
Q ss_pred cccceeeeeeeeeeecCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eCeEEEEEcCC
Q psy14906 15 SSKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DFFHIYTSANN 92 (583)
Q Consensus 15 ~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~ 92 (583)
+.++-.+.+=+| -..-.|..+.++|+++. ++.+.++...||.....+....-.+ ..++| .+++++-..++
T Consensus 18 g~~~~l~~k~lg-~~~~~p~~ls~npngr~--v~V~g~geY~iyt~~~~r~k~~G~g-----~~~vw~~~n~yAv~~~~~ 89 (443)
T PF04053_consen 18 GERLPLSVKELG-SCEIYPQSLSHNPNGRF--VLVCGDGEYEIYTALAWRNKAFGSG-----LSFVWSSRNRYAVLESSS 89 (443)
T ss_dssp TS-B----EEEE-E-SS--SEEEE-TTSSE--EEEEETTEEEEEETTTTEEEEEEE------SEEEE-TSSEEEEE-TTS
T ss_pred CceeeEEeccCC-CCCcCCeeEEECCCCCE--EEEEcCCEEEEEEccCCcccccCce-----eEEEEecCccEEEEECCC
Confidence 445555667777 55667999999988766 5558999999998655555442221 22333 56888888888
Q ss_pred eEEEEe-ccceeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeC
Q psy14906 93 IIYAWR-RGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPS 171 (583)
Q Consensus 93 ~i~vw~-~~~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 171 (583)
+|.|+. .+.+..+.++.. ..+..|-. |..|+..+. +.|.+||+++++.+.++.. .+|..+.|+
T Consensus 90 ~I~I~kn~~~~~~k~i~~~-~~~~~If~-G~LL~~~~~-~~i~~yDw~~~~~i~~i~v-------------~~vk~V~Ws 153 (443)
T PF04053_consen 90 TIKIYKNFKNEVVKSIKLP-FSVEKIFG-GNLLGVKSS-DFICFYDWETGKLIRRIDV-------------SAVKYVIWS 153 (443)
T ss_dssp -EEEEETTEE-TT-----S-S-EEEEE--SSSEEEEET-TEEEEE-TTT--EEEEESS--------------E-EEEEE-
T ss_pred eEEEEEcCccccceEEcCC-cccceEEc-CcEEEEECC-CCEEEEEhhHcceeeEEec-------------CCCcEEEEE
Confidence 999975 444443333322 23555544 888877764 4899999999999999962 248999999
Q ss_pred CCCCEEEEEecCCeEEEEEccCC-----------ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeeh
Q psy14906 172 PVVDIIGVGLSNKKIILHNILTD-----------ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE 240 (583)
Q Consensus 172 ~~~~~l~~~~~d~~i~iw~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 240 (583)
++++++|..+.+ .+.+++.... .....+..-...|.+..|..+ - ++++.. . .++. +-.|+.-
T Consensus 154 ~~g~~val~t~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d-~-fiYtT~-~-~lkY--l~~Ge~~ 226 (443)
T PF04053_consen 154 DDGELVALVTKD-SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED-C-FIYTTS-N-HLKY--LVNGETG 226 (443)
T ss_dssp TTSSEEEEE-S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT-E-EEEE-T-T-EEEE--EETTEEE
T ss_pred CCCCEEEEEeCC-eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC-E-EEEEcC-C-eEEE--EEcCCcc
Confidence 999999998766 6777765422 133333332478999999877 2 444444 3 6666 3334321
Q ss_pred hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEcc
Q psy14906 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 241 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 278 (583)
.+ ..-..++.=+.+.++.+.+.....|+.+..+.++
T Consensus 227 -~i-~~ld~~~yllgy~~~~~~ly~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 227 -II-AHLDKPLYLLGYLPKENRLYLIDRDGNVISYELD 262 (443)
T ss_dssp -EE-EE-SS--EEEEEETTTTEEEEE-TT--EEEEE--
T ss_pred -eE-EEcCCceEEEEEEccCCEEEEEECCCCEEEEEEC
Confidence 12 1224567777888877888888888888888664
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.52 E-value=0.00061 Score=64.37 Aligned_cols=92 Identities=14% Similarity=0.164 Sum_probs=72.2
Q ss_pred EEEEEccCCCCCce--EEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEE
Q psy14906 483 VKVWHFKQTGKPPL--RSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLI 560 (583)
Q Consensus 483 i~iwd~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~ 560 (583)
-.+|++..+..+.+ ..+.....+.+++++|+...|+.|+.||+|.+||...+... +..+.-.++.++|+|+|..++
T Consensus 238 ~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~gai~~ 315 (545)
T PF11768_consen 238 SCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGAIFV 315 (545)
T ss_pred EEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee--eeeecccceEEEEcCCCcEEE
Confidence 35677665522222 34566789999999999999999999999999998766433 223445688999999999999
Q ss_pred EEeCCCeEEEEeCCCc
Q psy14906 561 TASMDCTIRVWDIPSS 576 (583)
Q Consensus 561 s~~~d~~i~vw~~~~~ 576 (583)
+|+..|.+.+||+.-+
T Consensus 316 V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 316 VGSEQGELQCFDMALS 331 (545)
T ss_pred EEcCCceEEEEEeecC
Confidence 9999999999998644
|
|
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=98.51 E-value=0.00029 Score=67.13 Aligned_cols=108 Identities=10% Similarity=0.081 Sum_probs=64.5
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCC
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG 492 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 492 (583)
+++..+++||+++++|.-..+|.+.+.+..-.+....+. ..-......+.|.-+...++.- ...+.+......
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~----~~~~~~p~~~~WCG~dav~l~~--~~~l~lvg~~~~- 289 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFD----TDSKSPPKQMAWCGNDAVVLSW--EDELLLVGPDGD- 289 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEee----cCcCCCCcEEEEECCCcEEEEe--CCEEEEECCCCC-
Confidence 579999999999999999999999998866555554442 1223456677776554333222 233444432221
Q ss_pred CCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecc
Q psy14906 493 KPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG 542 (583)
Q Consensus 493 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 542 (583)
.+.|.-++..++..--|| ++|+.-..-+.+.+...
T Consensus 290 --------------~~~~~~~~~~~l~~E~DG-~riit~~~~~~l~~Vp~ 324 (410)
T PF04841_consen 290 --------------SISFWYDGPVILVSEIDG-VRIITSTSHEFLQRVPD 324 (410)
T ss_pred --------------ceEEeccCceEEeccCCc-eEEEeCCceEEEEECCH
Confidence 123333344444445555 77777666666665543
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=98.50 E-value=0.00019 Score=67.63 Aligned_cols=74 Identities=9% Similarity=0.075 Sum_probs=64.0
Q ss_pred CcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccc
Q psy14906 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533 (583)
Q Consensus 457 ~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 533 (583)
.....|.+.+++|+...|+.|+.||.|.+||...+ .....+..-.++.++|+|+|.++++|+..|.+.+||+.-
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~---~t~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~AL 330 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRG---VTLLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMAL 330 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCC---eeeeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeec
Confidence 56788999999999999999999999999998775 233334555789999999999999999999999999853
|
|
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.45 E-value=0.00054 Score=64.94 Aligned_cols=160 Identities=16% Similarity=0.140 Sum_probs=117.4
Q ss_pred CceEEEEccCCcEEEEEec---CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee-cCCcEEEEEcc
Q psy14906 414 KPTCVYITHCGNFVLIGYS---SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFK 489 (583)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~ 489 (583)
....++++|+++.+.++.. ++.+.+.|..+++...... .-..+ ..++++|+++.++... .++.|.+.|..
T Consensus 117 ~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~-----vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~ 190 (381)
T COG3391 117 GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIP-----VGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTS 190 (381)
T ss_pred CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEe-----cCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCC
Confidence 4668999999988888766 6899999999988887742 22233 8999999999665554 78899999977
Q ss_pred CCCCCceE-----EeeccCCeeeEEeccCCcEEEEEeCC---ceEEEEEccccceEEeeccccc-ceeeEEecCCCcEEE
Q psy14906 490 QTGKPPLR-----SIKLDNGISFFRTHQESSMLAVCLDD---FTVNIIDIDTCTIIRKLSGHMG-QLTDADFSPDSRWLI 560 (583)
Q Consensus 490 ~~~~~~~~-----~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~h~~-~v~~l~~s~d~~~l~ 560 (583)
.. ...+ ..........+.++|+|..+.+.... +.+...|..++.....-..-.. ....+.++|+|.++.
T Consensus 191 ~~--~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~y 268 (381)
T COG3391 191 GN--SVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAY 268 (381)
T ss_pred Cc--ceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEE
Confidence 65 4443 23334567789999999977665554 5999999998887765221112 466789999999988
Q ss_pred EEeC-CCeEEEEeCCCcccccc
Q psy14906 561 TASM-DCTIRVWDIPSSQLIDC 581 (583)
Q Consensus 561 s~~~-d~~i~vw~~~~~~~~~~ 581 (583)
.... .+.+.+-|..+.+....
T Consensus 269 v~~~~~~~V~vid~~~~~v~~~ 290 (381)
T COG3391 269 VANSQGGTVSVIDGATDRVVKT 290 (381)
T ss_pred EEecCCCeEEEEeCCCCceeee
Confidence 7744 47888888887766553
|
|
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=98.39 E-value=0.00063 Score=59.08 Aligned_cols=168 Identities=10% Similarity=0.112 Sum_probs=101.0
Q ss_pred cCCcceEEEeeCCCCC-EEEEEecCCeEEEEEccCCceeEEEecc-CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC
Q psy14906 160 RWNSCVNVLEPSPVVD-IIGVGLSNKKIILHNILTDESLMEFIQT-WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR 237 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 237 (583)
+-...+..++|.|+.+ ++++....+.|..++. +|+.+.++... .+....|++..++. ++++.-.++.+.++++...
T Consensus 19 g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~-~vl~~Er~~~L~~~~~~~~ 96 (248)
T PF06977_consen 19 GILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGR-YVLSEERDQRLYIFTIDDD 96 (248)
T ss_dssp T--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTE-EEEEETTTTEEEEEEE---
T ss_pred CccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCE-EEEEEcCCCcEEEEEEecc
Confidence 4456699999999755 5666777788888886 48888877633 36789999998887 6666667899999988432
Q ss_pred ee------hh----hhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCcee-eEE------eccCCCCCeeE
Q psy14906 238 QV------EN----QIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRL-LRI------REGHSAPPNYI 300 (583)
Q Consensus 238 ~~------~~----~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~-~~~------~~~~~~~v~~~ 300 (583)
.. .. .+...+...+-.++|.+.++.|+.+-...-..++.++........ ... .......+.++
T Consensus 97 ~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l 176 (248)
T PF06977_consen 97 TTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLSGL 176 (248)
T ss_dssp -TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---EE
T ss_pred ccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccccce
Confidence 11 11 111234567899999999888888877766778866541111111 111 12234567899
Q ss_pred EEeeCCCCEEEEeeCCCcEEEEEccccccc
Q psy14906 301 QFYGNSSDNILSAAGDSTLRIFNTKSETSN 330 (583)
Q Consensus 301 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 330 (583)
+++|.++.+++....+..+..+| .+++..
T Consensus 177 ~~~p~t~~lliLS~es~~l~~~d-~~G~~~ 205 (248)
T PF06977_consen 177 SYDPRTGHLLILSDESRLLLELD-RQGRVV 205 (248)
T ss_dssp EEETTTTEEEEEETTTTEEEEE--TT--EE
T ss_pred EEcCCCCeEEEEECCCCeEEEEC-CCCCEE
Confidence 99998888888888888898888 444443
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=98.38 E-value=2e-05 Score=74.84 Aligned_cols=141 Identities=18% Similarity=0.226 Sum_probs=85.5
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCC
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG 492 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 492 (583)
..+..+.++|+|+++++ ..+|.-.+|.....+ ....+.-..++|.+.++ +|+-....+|.|+.--..
T Consensus 33 ~~p~~ls~npngr~v~V-~g~geY~iyt~~~~r----------~k~~G~g~~~vw~~~n~-yAv~~~~~~I~I~kn~~~- 99 (443)
T PF04053_consen 33 IYPQSLSHNPNGRFVLV-CGDGEYEIYTALAWR----------NKAFGSGLSFVWSSRNR-YAVLESSSTIKIYKNFKN- 99 (443)
T ss_dssp S--SEEEE-TTSSEEEE-EETTEEEEEETTTTE----------EEEEEE-SEEEE-TSSE-EEEE-TTS-EEEEETTEE-
T ss_pred cCCeeEEECCCCCEEEE-EcCCEEEEEEccCCc----------ccccCceeEEEEecCcc-EEEEECCCeEEEEEcCcc-
Confidence 56889999999999999 567778888732222 22345667889999555 666666888999632222
Q ss_pred CCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEe
Q psy14906 493 KPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 493 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~ 572 (583)
.....+..+..+..+-. |.+|+..+.+ .|.+||.++++.++++... +|..+.|++++.++|-.+.+ .+.+++
T Consensus 100 -~~~k~i~~~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~ 171 (443)
T PF04053_consen 100 -EVVKSIKLPFSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILK 171 (443)
T ss_dssp --TT-----SS-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEE
T ss_pred -ccceEEcCCcccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEE
Confidence 33344444444444443 8888887666 8999999999999998843 49999999999999988866 577776
Q ss_pred CC
Q psy14906 573 IP 574 (583)
Q Consensus 573 ~~ 574 (583)
.+
T Consensus 172 ~~ 173 (443)
T PF04053_consen 172 YN 173 (443)
T ss_dssp E-
T ss_pred ec
Confidence 54
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex | Back alignment and domain information |
|---|
Probab=98.37 E-value=0.0019 Score=61.75 Aligned_cols=204 Identities=10% Similarity=0.068 Sum_probs=105.3
Q ss_pred eEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchh
Q psy14906 271 TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLE 350 (583)
Q Consensus 271 ~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (583)
.|++|+. .++.+..+.-..+.+.++.|+ +...|+....||.++++|+.... .+......
T Consensus 62 ~I~iys~-----sG~ll~~i~w~~~~iv~~~wt--~~e~LvvV~~dG~v~vy~~~G~~---~fsl~~~i----------- 120 (410)
T PF04841_consen 62 SIQIYSS-----SGKLLSSIPWDSGRIVGMGWT--DDEELVVVQSDGTVRVYDLFGEF---QFSLGEEI----------- 120 (410)
T ss_pred EEEEECC-----CCCEeEEEEECCCCEEEEEEC--CCCeEEEEEcCCEEEEEeCCCce---eechhhhc-----------
Confidence 4677733 445555544444789999998 45678888899999999986443 21111000
Q ss_pred ccccccCCCccceeeeeccccccc-ccEEEEecCCceEEEeecCccccc-c-eeeecccccccC-CCCceE-EEEccCCc
Q psy14906 351 KMNEKFILPPVSQFSFGLAREKDW-NNIAAIHTGKNKVSLWSFYKSKMD-D-MFLVPERCKQAK-QSKPTC-VYITHCGN 425 (583)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~-~-~~~~~~~~~~~~-~~~i~~-~~~s~~~~ 425 (583)
....+... .......+ ..+++. +.++.+.+.+-...... . ....+......+ ...... ..++.+..
T Consensus 121 ------~~~~v~e~--~i~~~~~~~~GivvL-t~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~ 191 (410)
T PF04841_consen 121 ------EEEKVLEC--RIFAIWFYKNGIVVL-TGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRV 191 (410)
T ss_pred ------cccCcccc--cccccccCCCCEEEE-CCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcc
Confidence 00000000 00011112 223333 34444433322221110 0 000011000000 011111 33455555
Q ss_pred EEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc--C
Q psy14906 426 FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD--N 503 (583)
Q Consensus 426 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~ 503 (583)
..+....++.+.+.+-...+. + ...+++..++.||+++++|.-..+|.+.+...+-. +....+... .
T Consensus 192 ~~i~~~~g~~i~~i~~~~~~~---i------~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~--~~~~e~~~~~~~ 260 (410)
T PF04841_consen 192 VEILLANGETIYIIDENSFKQ---I------DSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFS--EKLCEFDTDSKS 260 (410)
T ss_pred eEEEEecCCEEEEEEcccccc---c------cCCCCeEEEEECCCCCEEEEEECCCCEEEEECccc--ceeEEeecCcCC
Confidence 555555566666554332211 1 23468999999999999999999999999876655 555555554 5
Q ss_pred CeeeEEeccCCc
Q psy14906 504 GISFFRTHQESS 515 (583)
Q Consensus 504 ~v~~~~~s~~~~ 515 (583)
....+.|+-+..
T Consensus 261 ~p~~~~WCG~da 272 (410)
T PF04841_consen 261 PPKQMAWCGNDA 272 (410)
T ss_pred CCcEEEEECCCc
Confidence 677888876543
|
Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm |
| >PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators [] | Back alignment and domain information |
|---|
Probab=98.37 E-value=0.00033 Score=60.78 Aligned_cols=206 Identities=11% Similarity=0.086 Sum_probs=114.2
Q ss_pred EEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeee
Q psy14906 288 RIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFG 367 (583)
Q Consensus 288 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (583)
+.+.+-...+..++|.|.++.++++....+.|...+.. ++.++.+....
T Consensus 15 ~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~vlr~i~l~g------------------------------ 63 (248)
T PF06977_consen 15 KPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKVLRRIPLDG------------------------------ 63 (248)
T ss_dssp EE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---EEEEEE-SS------------------------------
T ss_pred eECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCEEEEEeCCC------------------------------
Confidence 34556666799999998556666666777888777763 44444331110
Q ss_pred cccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcc-
Q psy14906 368 LAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH- 446 (583)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~- 446 (583)
......+++..++.++++.-.++.+.++++.....
T Consensus 64 --------------------------------------------~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~~~~ 99 (248)
T PF06977_consen 64 --------------------------------------------FGDYEGITYLGNGRYVLSEERDQRLYIFTIDDDTTS 99 (248)
T ss_dssp ---------------------------------------------SSEEEEEE-STTEEEEEETTTTEEEEEEE----TT
T ss_pred --------------------------------------------CCCceeEEEECCCEEEEEEcCCCcEEEEEEeccccc
Confidence 03466788888887777776688899988843221
Q ss_pred -----ccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccC--CCCCceEEee---------ccCCeeeEEe
Q psy14906 447 -----RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQ--TGKPPLRSIK---------LDNGISFFRT 510 (583)
Q Consensus 447 -----~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~---------~~~~v~~~~~ 510 (583)
...+.......++..+..++|+|.++.|+.+-+..-..+|.+.. .. ..+.... ....+.++.+
T Consensus 100 ~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~S~l~~ 178 (248)
T PF06977_consen 100 LDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGG-FDLFVSDDQDLDDDKLFVRDLSGLSY 178 (248)
T ss_dssp --EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-S-S--EEEE-HHHH-HT--SS---EEEE
T ss_pred cchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCc-cceeeccccccccccceeccccceEE
Confidence 11121111134667799999999888887787777778888765 11 1111111 1235788899
Q ss_pred ccCC-cEEEEEeCCceEEEEEccccceEEeecccc---------cceeeEEecCCCcEEEEEeCCCeEEEE
Q psy14906 511 HQES-SMLAVCLDDFTVNIIDIDTCTIIRKLSGHM---------GQLTDADFSPDSRWLITASMDCTIRVW 571 (583)
Q Consensus 511 s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~---------~~v~~l~~s~d~~~l~s~~~d~~i~vw 571 (583)
+|.. .+++....+..|..+| .+|+.+..+.-.. .....|+|.++|++.+ .++-+..+++
T Consensus 179 ~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYI-vsEpNlfy~f 247 (248)
T PF06977_consen 179 DPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYI-VSEPNLFYRF 247 (248)
T ss_dssp ETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEE-EETTTEEEEE
T ss_pred cCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEE-EcCCceEEEe
Confidence 9864 5667777788999999 5577665443211 2467899999996544 5577766655
|
Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A. |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.37 E-value=5e-05 Score=71.93 Aligned_cols=160 Identities=14% Similarity=0.156 Sum_probs=102.9
Q ss_pred cCCcceEEEeeCCCCCEEEEEe---cC-CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCc--EEEEe
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGL---SN-KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGH--LTVWN 233 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~---~d-~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~--i~vwd 233 (583)
.....+..-+|+|+++.++... .. ..+.++++.+++....+... +.-..-+|+|||+.++++...||. |.+.|
T Consensus 190 ~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~-g~~~~P~fspDG~~l~f~~~rdg~~~iy~~d 268 (425)
T COG0823 190 DSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFN-GNNGAPAFSPDGSKLAFSSSRDGSPDIYLMD 268 (425)
T ss_pred ccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccC-CccCCccCCCCCCEEEEEECCCCCccEEEEc
Confidence 4456777889999999877552 22 36999999988766665533 555677999999988888888887 55567
Q ss_pred CCCCeehhhhhhccccceEEEEEecCCCEEEEEe-CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEE
Q psy14906 234 LEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS-PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILS 312 (583)
Q Consensus 234 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 312 (583)
+..+...+ + ..-.+.-..-.|+|||+.++..+ ..|.-.||.++........+ +..+ ..-..-.++| ||++++.
T Consensus 269 l~~~~~~~-L-t~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~ri-T~~~--~~~~~p~~Sp-dG~~i~~ 342 (425)
T COG0823 269 LDGKNLPR-L-TNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRL-TFSG--GGNSNPVWSP-DGDKIVF 342 (425)
T ss_pred CCCCccee-c-ccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEe-eccC--CCCcCccCCC-CCCEEEE
Confidence 76665333 4 22223333678999999877654 45777788766654333222 2222 2222667887 8888887
Q ss_pred eeCC-Cc--EEEEEccc
Q psy14906 313 AAGD-ST--LRIFNTKS 326 (583)
Q Consensus 313 ~~~d-g~--i~iwd~~~ 326 (583)
.+.. |. |.+.|+.+
T Consensus 343 ~~~~~g~~~i~~~~~~~ 359 (425)
T COG0823 343 ESSSGGQWDIDKNDLAS 359 (425)
T ss_pred EeccCCceeeEEeccCC
Confidence 7743 43 44444433
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=98.36 E-value=0.0006 Score=64.08 Aligned_cols=259 Identities=11% Similarity=0.078 Sum_probs=138.1
Q ss_pred ceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCc---------------------------------------eeeEEe
Q psy14906 250 VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNG---------------------------------------RLLRIR 290 (583)
Q Consensus 250 ~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~---------------------------------------~~~~~~ 290 (583)
.|+.+.|.++...|+.+...|.|.||.+......+ .+...+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 57889999998999999999999999764321111 011112
Q ss_pred ccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccc
Q psy14906 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAR 370 (583)
Q Consensus 291 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (583)
....++|++++.+ |=.+++.|..+|.+.+.|++....+..-.... ..........+..+.+....
T Consensus 83 ~~~~g~vtal~~S--~iGFvaigy~~G~l~viD~RGPavI~~~~i~~-------------~~~~~~~~~~vt~ieF~vm~ 147 (395)
T PF08596_consen 83 DAKQGPVTALKNS--DIGFVAIGYESGSLVVIDLRGPAVIYNENIRE-------------SFLSKSSSSYVTSIEFSVMT 147 (395)
T ss_dssp ---S-SEEEEEE---BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG---------------T-SS----EEEEEEEEEE
T ss_pred eccCCcEeEEecC--CCcEEEEEecCCcEEEEECCCCeEEeeccccc-------------cccccccccCeeEEEEEEEe
Confidence 3346789999987 56799999999999999998877665432211 00011111122233333322
Q ss_pred ccc---cccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEE-EccC-C-------------------cE
Q psy14906 371 EKD---WNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVY-ITHC-G-------------------NF 426 (583)
Q Consensus 371 ~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~s~~-~-------------------~~ 426 (583)
..+ ..-.+.++++.|.+.+|.+.....+............+...+..+. ++.+ | .-
T Consensus 148 ~~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g 227 (395)
T PF08596_consen 148 LGGDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPG 227 (395)
T ss_dssp -TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----E
T ss_pred cCCCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCc
Confidence 222 2356788899999999988643333333333322222334444444 3221 1 12
Q ss_pred EEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEE-----eCCCcEEEEeecCCcEEEEEccCCCCCceEEeec
Q psy14906 427 VLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVS-----DNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL 501 (583)
Q Consensus 427 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~-----s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 501 (583)
+++...+..++++...+.+..++. .........+.+ ...+..|++-..+|.++++.+... +.+.....
T Consensus 228 ~vVvvSe~~irv~~~~~~k~~~K~-----~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~L--kei~~~~l 300 (395)
T PF08596_consen 228 YVVVVSESDIRVFKPPKSKGAHKS-----FDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSL--KEIKSVSL 300 (395)
T ss_dssp EEEEE-SSEEEEE-TT---EEEEE------SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT----EEEEEE-
T ss_pred EEEEEcccceEEEeCCCCccccee-----eccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCc--hHhhcccC
Confidence 333344666999999887776655 222222333444 235668888899999999999887 77766665
Q ss_pred cC-----CeeeEEeccCCcEEEEEeCCceEEEEEc
Q psy14906 502 DN-----GISFFRTHQESSMLAVCLDDFTVNIIDI 531 (583)
Q Consensus 502 ~~-----~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 531 (583)
.. .+....++++|..++..+.. .+.++.+
T Consensus 301 ~~~~d~~~~~~ssis~~Gdi~~~~gps-E~~l~sv 334 (395)
T PF08596_consen 301 PPPLDSRRLSSSSISRNGDIFYWTGPS-EIQLFSV 334 (395)
T ss_dssp SS---HHHHTT-EE-TTS-EEEE-SSS-EEEEEEE
T ss_pred CCccccccccccEECCCCCEEEEeCcc-cEEEEEE
Confidence 32 35667889999977665443 4444433
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=98.34 E-value=0.0014 Score=64.76 Aligned_cols=142 Identities=8% Similarity=0.029 Sum_probs=85.9
Q ss_pred eEEEEEcccCccccccCCCCCCCccc-------CeeEEEEeCCCc---EEEEeecCCcEEEEEccCCCCCceEE------
Q psy14906 435 HVDRFNIQSGAHRGSYGHDNQPGHVG-------GVRGVVSDNLNQ---IVISGGNDQTVKVWHFKQTGKPPLRS------ 498 (583)
Q Consensus 435 ~i~i~d~~~~~~~~~~~~~~~~~h~~-------~v~~~~~s~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~------ 498 (583)
.|.-.|+++|+..-.+... .|.. ...=+.+..+|+ .++.+..+|.+.+.|..++ +++..
T Consensus 272 s~vAld~~TG~~~W~~Q~~---~~D~wD~d~~~~p~l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG--~~i~~~~~~~~ 346 (527)
T TIGR03075 272 SIVARDPDTGKIKWHYQTT---PHDEWDYDGVNEMILFDLKKDGKPRKLLAHADRNGFFYVLDRTNG--KLLSAEPFVDT 346 (527)
T ss_pred eEEEEccccCCEEEeeeCC---CCCCccccCCCCcEEEEeccCCcEEEEEEEeCCCceEEEEECCCC--ceeccccccCC
Confidence 5777888899887766431 2211 111122224665 7888999999999999887 54311
Q ss_pred --e----ecc--CC----------------------------eeeEEeccCCcEEEEEeC--------------------
Q psy14906 499 --I----KLD--NG----------------------------ISFFRTHQESSMLAVCLD-------------------- 522 (583)
Q Consensus 499 --~----~~~--~~----------------------------v~~~~~s~~~~~l~~~~~-------------------- 522 (583)
. ... .+ -..++++|+..++++...
T Consensus 347 ~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~ 426 (527)
T TIGR03075 347 VNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYL 426 (527)
T ss_pred cccccccCCCCCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCcee
Confidence 0 000 00 012456666555544322
Q ss_pred -------------CceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 523 -------------DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 523 -------------dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
-|.+.-+|+.+++.+.+.+......... ..-.+..++.++.||.++.+|.+||+.+-.+
T Consensus 427 ~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~~~~~~p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~ 498 (527)
T TIGR03075 427 GAGLTIKPPPDDHMGSLIAWDPITGKIVWEHKEDFPLWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKF 498 (527)
T ss_pred ccccccCCCCCCCceeEEEEeCCCCceeeEecCCCCCCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEEE
Confidence 2468888888998877665322212222 2225557777888999999999999988654
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.28 E-value=0.0033 Score=59.71 Aligned_cols=284 Identities=12% Similarity=0.104 Sum_probs=175.9
Q ss_pred EEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC-CeEEEEEccCCceeEEEeccCCCeEEEE
Q psy14906 133 VKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN-KKIILHNILTDESLMEFIQTWGPVTALS 211 (583)
Q Consensus 133 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~~~~v~~~~ 211 (583)
+.+++..+......+.. ......+...+++..+.+.... ..+...+...................++
T Consensus 13 ~~v~~~~~~~~~~~~~~------------~~~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~ 80 (381)
T COG3391 13 VSVINTGTNKVTAAISL------------GRGPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVA 80 (381)
T ss_pred eEEEeecccEEEEEeec------------CCCCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCcccccee
Confidence 66777666666655542 2255667888888655554332 2455555442222221121113456788
Q ss_pred EecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC---CCeEEEEEccCCCCCceeeE
Q psy14906 212 FRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP---DNTLKLWIFDKADGNGRLLR 288 (583)
Q Consensus 212 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---d~~i~~w~~~~~~~~~~~~~ 288 (583)
.++.+....+....+..|.+.|..+.+.......+. ....++++++++.+..+.. ++.+.+. +.. ......
T Consensus 81 v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvi--d~~--t~~~~~ 154 (381)
T COG3391 81 VNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVI--DAA--TNKVTA 154 (381)
T ss_pred eCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc--CCceEEECCCCCEEEEEecccCCceEEEE--eCC--CCeEEE
Confidence 888888666777677899999988777777663333 6678999999988777766 4555555 544 334444
Q ss_pred EeccCCCCCeeEEEeeCCCCEEEEee-CCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeee
Q psy14906 289 IREGHSAPPNYIQFYGNSSDNILSAA-GDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFG 367 (583)
Q Consensus 289 ~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (583)
....-..+ ..+++.| ++..++... .++.+.+.|.......+ - ...
T Consensus 155 ~~~vG~~P-~~~a~~p-~g~~vyv~~~~~~~v~vi~~~~~~v~~-~-~~~------------------------------ 200 (381)
T COG3391 155 TIPVGNTP-TGVAVDP-DGNKVYVTNSDDNTVSVIDTSGNSVVR-G-SVG------------------------------ 200 (381)
T ss_pred EEecCCCc-ceEEECC-CCCeEEEEecCCCeEEEEeCCCcceec-c-ccc------------------------------
Confidence 43332234 8899998 777666554 67889999965543221 0 000
Q ss_pred cccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC---ceEEEEEcccC
Q psy14906 368 LAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS---GHVDRFNIQSG 444 (583)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~i~d~~~~ 444 (583)
...........+.++|+|+++.+.... +.+...|..++
T Consensus 201 ---------------------------------------~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~ 241 (381)
T COG3391 201 ---------------------------------------SLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATG 241 (381)
T ss_pred ---------------------------------------cccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCc
Confidence 000000346678999999977776554 58999999888
Q ss_pred ccccccCCCCCCCcccCeeEEEEeCCCcEEEEee-cCCcEEEEEccCCCCCceEEeeccC----CeeeEEeccC
Q psy14906 445 AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQTGKPPLRSIKLDN----GISFFRTHQE 513 (583)
Q Consensus 445 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~----~v~~~~~s~~ 513 (583)
.....-.. .+-. ....+..+|+|+.+.... ..+.+.+-|..+. .......... .+..+++.+.
T Consensus 242 ~v~~~~~~---~~~~-~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~--~v~~~~~~~~~~~~~~~~~~~~~~ 309 (381)
T COG3391 242 NVTATDLP---VGSG-APRGVAVDPAGKAAYVANSQGGTVSVIDGATD--RVVKTGPTGNEALGEPVSIAISPL 309 (381)
T ss_pred eEEEeccc---cccC-CCCceeECCCCCEEEEEecCCCeEEEEeCCCC--ceeeeecccccccccceeccceee
Confidence 77665211 1222 567789999999887774 4478999888876 5555544333 3555555553
|
|
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=98.28 E-value=0.00016 Score=68.62 Aligned_cols=140 Identities=9% Similarity=0.052 Sum_probs=86.4
Q ss_pred ceEEEEccCCcEEEEEe-cCc--eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee-cCCc--EEEEEc
Q psy14906 415 PTCVYITHCGNFVLIGY-SSG--HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG-NDQT--VKVWHF 488 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~-~dg--~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~--i~iwd~ 488 (583)
-...+|+|||+.|+... .|| .|+++|+..+.... + ..-.+.-+.-.|+|||+.++..+ ..|. |.+.+.
T Consensus 240 ~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~-L-----t~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~ 313 (425)
T COG0823 240 NGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR-L-----TNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDL 313 (425)
T ss_pred cCCccCCCCCCEEEEEECCCCCccEEEEcCCCCccee-c-----ccCCccccCccCCCCCCEEEEEeCCCCCcceEEECC
Confidence 44567999998877654 344 47777887776433 3 22333334778999999887665 4454 555566
Q ss_pred cCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCC-ce--EEEEEccccceEEeecccccceeeEEecCCCcEEEEEe
Q psy14906 489 KQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDD-FT--VNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 489 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~--i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~ 563 (583)
+.. ...+.......-..-.|+|||++++..+.. |. |.+.|+.++..+..+. +......-.|.++++.+...+
T Consensus 314 ~g~--~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt-~~~~~e~ps~~~ng~~i~~~s 388 (425)
T COG0823 314 EGS--QVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILT-STYLNESPSWAPNGRMIMFSS 388 (425)
T ss_pred CCC--ceeEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEcc-ccccCCCCCcCCCCceEEEec
Confidence 655 443333333333377899999998887743 43 6777776665444443 344455566777777665443
|
|
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=98.21 E-value=0.00038 Score=65.37 Aligned_cols=114 Identities=21% Similarity=0.273 Sum_probs=78.0
Q ss_pred ceEEEeeCCCCCEEEEEecCCeEEEEEccCCcee-------------------------------------------EEE
Q psy14906 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL-------------------------------------------MEF 200 (583)
Q Consensus 164 ~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~-------------------------------------------~~~ 200 (583)
.|+++.|+++..-|++|...|.|.||.+...+.- ..+
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 5788999999999999999999999876432111 111
Q ss_pred eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhh-------hhhccccceEEEEEec-----CC---CEEEE
Q psy14906 201 IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ-------IKKAHRKVVTGAHFLY-----NE---PLLVT 265 (583)
Q Consensus 201 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~-------~~~~~~~~v~~~~~~~-----~~---~~l~s 265 (583)
....++|++++.|.-| +++.|..+|.+.|.|++....+.. ........++++.|+- |+ -.+++
T Consensus 83 ~~~~g~vtal~~S~iG--Fvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~v 160 (395)
T PF08596_consen 83 DAKQGPVTALKNSDIG--FVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLV 160 (395)
T ss_dssp ---S-SEEEEEE-BTS--EEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEE
T ss_pred eccCCcEeEEecCCCc--EEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEE
Confidence 2335899999999777 899999999999999987665433 2122345788888862 33 37888
Q ss_pred EeCCCeEEEEEccC
Q psy14906 266 SSPDNTLKLWIFDK 279 (583)
Q Consensus 266 ~~~d~~i~~w~~~~ 279 (583)
|...|.+.+|.+..
T Consensus 161 GTn~G~v~~fkIlp 174 (395)
T PF08596_consen 161 GTNSGNVLTFKILP 174 (395)
T ss_dssp EETTSEEEEEEEEE
T ss_pred EeCCCCEEEEEEec
Confidence 89999999997753
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=98.19 E-value=7.1e-07 Score=83.52 Aligned_cols=189 Identities=12% Similarity=0.176 Sum_probs=125.2
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEE-EEeeccCCceEEecccCCcceEEEeeCC-CCCEEEEEec----CCeEEEEEccCC
Q psy14906 121 GPHLISVDEESNVKVWDIKAEETY-LELSFDNDTFKIMGKRWNSCVNVLEPSP-VVDIIGVGLS----NKKIILHNILTD 194 (583)
Q Consensus 121 ~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~----d~~i~iw~~~~~ 194 (583)
...++.|..+|.|.+-......-- .++. +++....++++|++ |.+.||+|-. |..+.|||+.++
T Consensus 70 ~cIlavG~atG~I~l~s~r~~hdSs~E~t----------p~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ 139 (783)
T KOG1008|consen 70 RCILAVGSATGNISLLSVRHPHDSSAEVT----------PGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSL 139 (783)
T ss_pred hhhhhhccccCceEEeecCCcccccceec----------ccccccccccccccccHHHHHhhhhhhcccCCccceecccc
Confidence 346777888898888877653322 1111 27889999999998 5677887743 567999999876
Q ss_pred --cee--EEEec-cCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC-eehhhhhhccccceEEEEEec-CCCEEEEEe
Q psy14906 195 --ESL--MEFIQ-TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR-QVENQIKKAHRKVVTGAHFLY-NEPLLVTSS 267 (583)
Q Consensus 195 --~~~--~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~ 267 (583)
.+. ..|.. ......+++|..+.+ ++.+|.....+.++|++.. .....+ .+..+..+...| .++++++-.
T Consensus 140 ltvPke~~~fs~~~l~gqns~cwlrd~k-lvlaGm~sr~~~ifdlRqs~~~~~sv---nTk~vqG~tVdp~~~nY~cs~~ 215 (783)
T KOG1008|consen 140 LTVPKESPLFSSSTLDGQNSVCWLRDTK-LVLAGMTSRSVHIFDLRQSLDSVSSV---NTKYVQGITVDPFSPNYFCSNS 215 (783)
T ss_pred cCCCccccccccccccCccccccccCcc-hhhcccccchhhhhhhhhhhhhhhhh---hhhhcccceecCCCCCceeccc
Confidence 222 22222 334566889997777 8899998899999999732 222222 345566777888 677877665
Q ss_pred CCCeEEEEEccCCCCCceeeEEecc----CCCCCeeEEEeeCCCCEEEEeeC-CCcEEEEEccc
Q psy14906 268 PDNTLKLWIFDKADGNGRLLRIREG----HSAPPNYIQFYGNSSDNILSAAG-DSTLRIFNTKS 326 (583)
Q Consensus 268 ~d~~i~~w~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~ 326 (583)
|+.+.+||-.. ....++..... ....+..++|.|.....+++... .++|+.+|+..
T Consensus 216 -dg~iAiwD~~r--nienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~ 276 (783)
T KOG1008|consen 216 -DGDIAIWDTYR--NIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICV 276 (783)
T ss_pred -cCceeeccchh--hhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccc
Confidence 99999996211 11122222211 12348899999966667777665 47899998754
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00078 Score=62.62 Aligned_cols=181 Identities=15% Similarity=0.206 Sum_probs=112.0
Q ss_pred CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCC----CCEEEEEec---------C-CeEEEEEccCC--
Q psy14906 131 SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV----VDIIGVGLS---------N-KKIILHNILTD-- 194 (583)
Q Consensus 131 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~----~~~l~~~~~---------d-~~i~iw~~~~~-- 194 (583)
+.|++.|..+.+.+.++.+.+. .+-..+..+.|..+ ..+|++|+. . |.|.++++...
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~-------E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~ 74 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPN-------EHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPE 74 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETT-------EEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS--
T ss_pred cEEEEEeCCCCeEEEEEECCCC-------ceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccc
Confidence 3689999999888888887532 11223334444443 568888764 2 88999999874
Q ss_pred --ceeEEE--eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe-ehhhhhhccccceEEEEEecCCCEEEEEeCC
Q psy14906 195 --ESLMEF--IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ-VENQIKKAHRKVVTGAHFLYNEPLLVTSSPD 269 (583)
Q Consensus 195 --~~~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 269 (583)
..+..+ ....++|++++-- ++. ++++. .+.|.+|++...+ ....-.......+.++.. .+++++.|+..
T Consensus 75 ~~~~l~~i~~~~~~g~V~ai~~~-~~~-lv~~~--g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~--~~~~I~vgD~~ 148 (321)
T PF03178_consen 75 NNFKLKLIHSTEVKGPVTAICSF-NGR-LVVAV--GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSV--FKNYILVGDAM 148 (321)
T ss_dssp ---EEEEEEEEEESS-EEEEEEE-TTE-EEEEE--TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEE--ETTEEEEEESS
T ss_pred cceEEEEEEEEeecCcceEhhhh-CCE-EEEee--cCEEEEEEccCcccchhhheecceEEEEEEec--cccEEEEEEcc
Confidence 122222 1335889998877 443 44444 3789999998777 433321112234555544 46699999998
Q ss_pred CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccc
Q psy14906 270 NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 270 ~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 326 (583)
..+.++.++........+.. ......+.++.+.+ +++.++.+..+|.+.++....
T Consensus 149 ~sv~~~~~~~~~~~l~~va~-d~~~~~v~~~~~l~-d~~~~i~~D~~gnl~~l~~~~ 203 (321)
T PF03178_consen 149 KSVSLLRYDEENNKLILVAR-DYQPRWVTAAEFLV-DEDTIIVGDKDGNLFVLRYNP 203 (321)
T ss_dssp SSEEEEEEETTTE-EEEEEE-ESS-BEEEEEEEE--SSSEEEEEETTSEEEEEEE-S
T ss_pred cCEEEEEEEccCCEEEEEEe-cCCCccEEEEEEec-CCcEEEEEcCCCeEEEEEECC
Confidence 89999877653222222222 22344578888885 446999999999999998753
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=98.16 E-value=0.0056 Score=55.63 Aligned_cols=148 Identities=14% Similarity=0.177 Sum_probs=89.5
Q ss_pred CCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhh--------
Q psy14906 172 PVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI-------- 243 (583)
Q Consensus 172 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-------- 243 (583)
..++.|+.|+.+| +.+++............. ..|..+...|+-+ .|++-+ |+.+.++++..-......
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~-~~I~ql~vl~~~~-~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~ 80 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRILKL-SSITQLSVLPELN-LLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKS 80 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEeec-ceEEEEEEecccC-EEEEEc-CCccEEEEchhhcccccccccccccc
Confidence 4578999999988 899998333333333322 3499999999877 455544 599999998765433311
Q ss_pred -----hhccccceEEEE--EecCCCEEEEEeCCCeEEEEEccCCCCCc-eeeEEeccCCCCCeeEEEeeCCCCEEEEeeC
Q psy14906 244 -----KKAHRKVVTGAH--FLYNEPLLVTSSPDNTLKLWIFDKADGNG-RLLRIREGHSAPPNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 244 -----~~~~~~~v~~~~--~~~~~~~l~s~~~d~~i~~w~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 315 (583)
.......+...+ -...+...+.......+.+|.+....... +..+.+.- ...+.+++|. ++.++.+..
T Consensus 81 ~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~l-p~~~~~i~~~---~~~i~v~~~ 156 (275)
T PF00780_consen 81 RSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISL-PDPPSSIAFL---GNKICVGTS 156 (275)
T ss_pred ccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEc-CCCcEEEEEe---CCEEEEEeC
Confidence 012233444444 11233333334445689999776543333 45555443 4678899997 346666664
Q ss_pred CCcEEEEEccccc
Q psy14906 316 DSTLRIFNTKSET 328 (583)
Q Consensus 316 dg~i~iwd~~~~~ 328 (583)
....+.|+.++.
T Consensus 157 -~~f~~idl~~~~ 168 (275)
T PF00780_consen 157 -KGFYLIDLNTGS 168 (275)
T ss_pred -CceEEEecCCCC
Confidence 357778877554
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >KOG1897|consensus | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.019 Score=58.09 Aligned_cols=447 Identities=12% Similarity=0.090 Sum_probs=224.2
Q ss_pred eCeEEEEEcCCeEEEEeccceeeeeecccCcc-EEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEeccc
Q psy14906 82 DFFHIYTSANNIIYAWRRGIDIVGTYKGHTSP-VHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKR 160 (583)
Q Consensus 82 ~~~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~-v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 160 (583)
.+..+.=-..+.|++++-.+ ....+..-.+. +..++.+...++.++.++.+...++..+......+ ..
T Consensus 460 ~g~~lvQvTs~~iRl~ss~~-~~~~W~~p~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~----------~~ 528 (1096)
T KOG1897|consen 460 NGNQLVQVTSNSIRLVSSAG-LRSEWRPPGKITIGVVSANASQVVVAGGGLALFYLEIEDGGLREVSH----------KE 528 (1096)
T ss_pred CCceEEEEecccEEEEcchh-hhhcccCCCceEEEEEeecceEEEEecCccEEEEEEeeccceeeeee----------he
Confidence 33334444455677777542 23333322222 33346666677777777888888877766322222 14
Q ss_pred CCcceEEEeeCCCC------CEEEEEecCCeEEEEEc-cCCceeEEEe--cc--CCCeEEEEEecCCCCEEEEEcCCCcE
Q psy14906 161 WNSCVNVLEPSPVV------DIIGVGLSNKKIILHNI-LTDESLMEFI--QT--WGPVTALSFRTDGPPMMVSGSNTGHL 229 (583)
Q Consensus 161 ~~~~i~~~~~s~~~------~~l~~~~~d~~i~iw~~-~~~~~~~~~~--~~--~~~v~~~~~~~~~~~~l~s~~~dg~i 229 (583)
....|.|+.++|-| +++++|..+..+.+.-. .....+.... +. ...|....|-.|.. +|.++..||.+
T Consensus 529 ~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~e~d~~-yLlvalgdG~l 607 (1096)
T KOG1897|consen 529 FEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTFEGDIH-YLLVALGDGAL 607 (1096)
T ss_pred ecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEeeccce-EEEEEcCCceE
Confidence 46789999999742 37889988776655443 3333333221 11 13344555555555 88999999998
Q ss_pred EEEeC--CCCeehhhhhhc--cccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeE-EEee
Q psy14906 230 TVWNL--EDRQVENQIKKA--HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYI-QFYG 304 (583)
Q Consensus 230 ~vwd~--~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~ 304 (583)
.-|.+ .+++.-..- +. -..++.--.|+..++.-+.+..|+-..+|.- +++....--. -..+..+ .|+.
T Consensus 608 ~~fv~d~~tg~lsd~K-k~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~-----n~kLv~spls-~kev~~~c~f~s 680 (1096)
T KOG1897|consen 608 LYFVLDINTGQLSDRK-KVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSS-----NGKLVYSPLS-LKEVNHMCPFNS 680 (1096)
T ss_pred EEEEEEcccceEcccc-ccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEec-----CCcEEEeccc-hHHhhhhccccc
Confidence 76654 444332211 11 1345555566655443333334555555532 2222221110 0111111 1221
Q ss_pred C-CCCEEEEeeCCCcEEEEEcccccc--ceeeccchhhhhhhhhhcchhccccccCCCc-cceeeeecccccccccEEEE
Q psy14906 305 N-SSDNILSAAGDSTLRIFNTKSETS--NKNLGIASANRNNLKRKNRLEKMNEKFILPP-VSQFSFGLAREKDWNNIAAI 380 (583)
Q Consensus 305 ~-~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 380 (583)
+ -+..++++.. +.+++..+..-+. ++++......+.. ...+ ...+.....+.........-
T Consensus 681 ~a~~d~l~~~~~-~~l~i~tid~iqkl~irtvpl~~~prrI--------------~~q~~sl~~~v~s~r~e~~~~~~~e 745 (1096)
T KOG1897|consen 681 DAYPDSLASANG-GALTIGTIDEIQKLHIRTVPLGESPRRI--------------CYQESSLTFGVLSNRIESSAEYYGE 745 (1096)
T ss_pred ccCCceEEEecC-CceEEEEecchhhcceeeecCCCChhhe--------------EecccceEEEEEecccccchhhcCC
Confidence 1 1234444443 4566665543222 1222111111100 0000 00111111000000000000
Q ss_pred ecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC-CcEEEEEec----------CceEEEEEcccCccccc
Q psy14906 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC-GNFVLIGYS----------SGHVDRFNIQSGAHRGS 449 (583)
Q Consensus 381 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~----------dg~i~i~d~~~~~~~~~ 449 (583)
...-..++++|.++.......... .... -..+.+..|..| +.++++|+. .|.|.+|....+..+..
T Consensus 746 e~~~s~l~vlD~nTf~vl~~hef~-~~E~--~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~ 822 (1096)
T KOG1897|consen 746 EYEVSFLRVLDQNTFEVLSSHEFE-RNET--ALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLEL 822 (1096)
T ss_pred cceEEEEEEecCCceeEEeecccc-ccce--eeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceee
Confidence 000123445554443321111000 0000 034555668777 788888874 58899999888444443
Q ss_pred cCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceE-EeeccCCeeeEEeccCCcEEEEEeCCceEEE
Q psy14906 450 YGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLR-SIKLDNGISFFRTHQESSMLAVCLDDFTVNI 528 (583)
Q Consensus 450 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 528 (583)
... ..-.+.+.++.. -+|+++|.-+ ..|++|++.+. +.++ .-.+..++..+...-.|..+++|.--+++.+
T Consensus 823 v~e---~~v~Gav~aL~~-fngkllA~In--~~vrLye~t~~--~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitl 894 (1096)
T KOG1897|consen 823 VAE---TVVKGAVYALVE-FNGKLLAGIN--QSVRLYEWTTE--RELRIECNISNPIIALDLQVKGDEIAVGDLMRSITL 894 (1096)
T ss_pred eee---eeeccceeehhh-hCCeEEEecC--cEEEEEEcccc--ceehhhhcccCCeEEEEEEecCcEEEEeeccceEEE
Confidence 311 122344444432 2677776554 58999999876 4443 3445678999999999999999998887777
Q ss_pred EEccc--cceEEeec-ccccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 529 IDIDT--CTIIRKLS-GHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 529 ~d~~~--~~~~~~~~-~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
...+. |......+ -+....+++.+-.+..++ -+..+|.+++-..+
T Consensus 895 l~y~~~eg~f~evArD~~p~Wmtaveil~~d~yl-gae~~gNlf~v~~d 942 (1096)
T KOG1897|consen 895 LQYKGDEGNFEEVARDYNPNWMTAVEILDDDTYL-GAENSGNLFTVRKD 942 (1096)
T ss_pred EEEeccCCceEEeehhhCccceeeEEEecCceEE-eecccccEEEEEec
Confidence 65543 33433322 366678888886555544 45567777665544
|
|
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.06 E-value=0.0016 Score=58.86 Aligned_cols=217 Identities=15% Similarity=0.071 Sum_probs=120.1
Q ss_pred cEEEEEeCCCceEEEEeeCCeEEEEecCCcE-EEeecCCCCCCeEEEEeeCeEEEEEcCCeEEEEecc-ceeeeeec--c
Q psy14906 34 VVARFIRRRKETLFVTCVGKAFHVYGCNHFK-LLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRG-IDIVGTYK--G 109 (583)
Q Consensus 34 ~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~~~~~i~vw~~~-~~~~~~~~--~ 109 (583)
..-.|.|+...++.+--.++.|.-||.++++ .....++....+..+...+.++++... +.+++.+ +..+..+. .
T Consensus 28 EgP~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~~~p~~~~~~~~~d~~g~Lv~~~~g--~~~~~~~~~~~~t~~~~~~ 105 (307)
T COG3386 28 EGPVWDPDRGALLWVDILGGRIHRLDPETGKKRVFPSPGGFSSGALIDAGGRLIACEHG--VRLLDPDTGGKITLLAEPE 105 (307)
T ss_pred cCccCcCCCCEEEEEeCCCCeEEEecCCcCceEEEECCCCcccceeecCCCeEEEEccc--cEEEeccCCceeEEecccc
Confidence 4445766666655555589999999998764 444444444333333333444444333 3334432 11111111 1
Q ss_pred cCcc---EE--EEccCCCEEEEEeC------C---CcEEEEEcC-CCcEEEEeeccCCceEEecccCCcceEEEeeCCCC
Q psy14906 110 HTSP---VH--LILPFGPHLISVDE------E---SNVKVWDIK-AEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVV 174 (583)
Q Consensus 110 h~~~---v~--~is~~~~~l~s~~~------d---g~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 174 (583)
...+ -+ .+.|+|.+.++... . ..=.+|-+. .+..+..+. .+-..-+.|+||||+
T Consensus 106 ~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~-----------~~~~~~NGla~SpDg 174 (307)
T COG3386 106 DGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLD-----------DDLTIPNGLAFSPDG 174 (307)
T ss_pred CCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeec-----------CcEEecCceEECCCC
Confidence 1111 11 23788887776433 0 111344444 344444443 445566789999999
Q ss_pred CEEEEEec-CCeEEEEEccC--C----c-eeEEEeccCCCeEEEEEecCCCCEEEEEcCCC-cEEEEeCCCCeehhhhhh
Q psy14906 175 DIIGVGLS-NKKIILHNILT--D----E-SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTG-HLTVWNLEDRQVENQIKK 245 (583)
Q Consensus 175 ~~l~~~~~-d~~i~iw~~~~--~----~-~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg-~i~vwd~~~~~~~~~~~~ 245 (583)
+.|..+.. .+.|.-|++.. + + ....+....+..-.++...+|. +.+++..+| .|.+|+.+ ++++..+ .
T Consensus 175 ~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~-lw~~a~~~g~~v~~~~pd-G~l~~~i-~ 251 (307)
T COG3386 175 KTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGN-LWVAAVWGGGRVVRFNPD-GKLLGEI-K 251 (307)
T ss_pred CEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCC-EEEecccCCceEEEECCC-CcEEEEE-E
Confidence 88777654 47788887752 2 1 1122223346666778888887 443444443 89999998 8888877 3
Q ss_pred ccccceEEEEEe-cCCCEEEEE
Q psy14906 246 AHRKVVTGAHFL-YNEPLLVTS 266 (583)
Q Consensus 246 ~~~~~v~~~~~~-~~~~~l~s~ 266 (583)
-....+++++|- ++.+.|+..
T Consensus 252 lP~~~~t~~~FgG~~~~~L~iT 273 (307)
T COG3386 252 LPVKRPTNPAFGGPDLNTLYIT 273 (307)
T ss_pred CCCCCCccceEeCCCcCEEEEE
Confidence 444677788884 344444433
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.0021 Score=59.78 Aligned_cols=170 Identities=14% Similarity=0.117 Sum_probs=106.6
Q ss_pred CeEEEEecCCc-----EEEeec-CCCCCCeEEEEeeCeEEEEEcCCeEEEEecccee-eeeec--ccCccEEEEccCCCE
Q psy14906 53 KAFHVYGCNHF-----KLLSVS-PQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDI-VGTYK--GHTSPVHLILPFGPH 123 (583)
Q Consensus 53 ~~i~v~d~~~~-----~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~i~vw~~~~~~-~~~~~--~h~~~v~~is~~~~~ 123 (583)
|.|.++++... ++.... ...+++|++++.-+..++++.++.|.+|+++... +.... .....++++...+++
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~~~~lv~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~ 141 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHSTEVKGPVTAICSFNGRLVVAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNY 141 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEETTEEEEEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTE
T ss_pred cEEEEEEEEcccccceEEEEEEEEeecCcceEhhhhCCEEEEeecCEEEEEEccCcccchhhheecceEEEEEEeccccE
Confidence 88999999883 222221 2368899999974434777788999999975433 22222 233477888888889
Q ss_pred EEEEeCCCcEEEEEcCC-CcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccC-------Cc
Q psy14906 124 LISVDEESNVKVWDIKA-EETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILT-------DE 195 (583)
Q Consensus 124 l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~-------~~ 195 (583)
++.|+....+.++.++. +..+..+.-+ .....++++.|-++++.++++..+|.+.++.... +.
T Consensus 142 I~vgD~~~sv~~~~~~~~~~~l~~va~d---------~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~ 212 (321)
T PF03178_consen 142 ILVGDAMKSVSLLRYDEENNKLILVARD---------YQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGD 212 (321)
T ss_dssp EEEEESSSSEEEEEEETTTE-EEEEEEE---------SS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTT
T ss_pred EEEEEcccCEEEEEEEccCCEEEEEEec---------CCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCccccccc
Confidence 99999888888886654 3333333311 3456788999987778999999999999988762 12
Q ss_pred -e---eEEEeccCCCeEEE---EEec--CCCC-----EEEEEcCCCcEEEE
Q psy14906 196 -S---LMEFIQTWGPVTAL---SFRT--DGPP-----MMVSGSNTGHLTVW 232 (583)
Q Consensus 196 -~---~~~~~~~~~~v~~~---~~~~--~~~~-----~l~s~~~dg~i~vw 232 (583)
. ...+.-. ..|+++ ++.| .+.. .++.++.+|.|-+.
T Consensus 213 ~~L~~~~~f~lg-~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 213 PKLERISSFHLG-DIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp TBEEEEEEEE-S-S-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred ccceeEEEEECC-CccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 1 2223333 567777 5455 2221 37778888988844
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.011 Score=55.47 Aligned_cols=97 Identities=19% Similarity=0.190 Sum_probs=61.2
Q ss_pred cEEEEccCCCEEEEEeCCCcEEE---EEcCC-C--cEEEEeeccCCceEEecccCCcceEEEeeC-----------CCCC
Q psy14906 113 PVHLILPFGPHLISVDEESNVKV---WDIKA-E--ETYLELSFDNDTFKIMGKRWNSCVNVLEPS-----------PVVD 175 (583)
Q Consensus 113 ~v~~is~~~~~l~s~~~dg~i~i---wd~~~-~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-----------~~~~ 175 (583)
...+++|+++.||.+..+..+.+ |+... + +....+....... ......|+++.+- +|..
T Consensus 5 ~~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~----~~~~e~ITsi~clpl~s~~~s~~~~dw~ 80 (415)
T PF14655_consen 5 CSISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLD----DEPGECITSILCLPLSSQKRSTGGPDWT 80 (415)
T ss_pred ceEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeecc----CCCCCEEEEEEEEEeecccccCCCCCcE
Confidence 34466999999999877766655 54321 2 1112221110000 0111456665552 4567
Q ss_pred EEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEec
Q psy14906 176 IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRT 214 (583)
Q Consensus 176 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~ 214 (583)
.+++|..+|.|++|.. +|..+..-..|..+|..+.+..
T Consensus 81 ~I~VG~ssG~vrfyte-~G~LL~~Q~~h~~pV~~ik~~~ 118 (415)
T PF14655_consen 81 CIAVGTSSGYVRFYTE-NGVLLLSQLLHEEPVLKIKCRS 118 (415)
T ss_pred EEEEEecccEEEEEec-cchHHHHHhcCccceEEEEecc
Confidence 8999999999999997 5777766667789999998864
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.0052 Score=59.65 Aligned_cols=110 Identities=17% Similarity=0.189 Sum_probs=69.8
Q ss_pred EEccCCCEEEEE-eCCC----cEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCC------
Q psy14906 116 LILPFGPHLISV-DEES----NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNK------ 184 (583)
Q Consensus 116 ~is~~~~~l~s~-~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~------ 184 (583)
.+||||++||.+ +..| .|++.|+++|+.+...- . ......+.|.+|++.|+....+.
T Consensus 130 ~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i-----------~-~~~~~~~~W~~d~~~~~y~~~~~~~~~~~ 197 (414)
T PF02897_consen 130 SVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGI-----------E-NPKFSSVSWSDDGKGFFYTRFDEDQRTSD 197 (414)
T ss_dssp EETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEE-----------E-EEESEEEEECTTSSEEEEEECSTTTSS-C
T ss_pred eECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcc-----------c-ccccceEEEeCCCCEEEEEEeCccccccc
Confidence 359999998864 3344 59999999997765331 1 12223499999999877665332
Q ss_pred -----eEEEEEccCCcee--EEEeccCCC--eEEEEEecCCCCEEEEEcCC---CcEEEEeCCCC
Q psy14906 185 -----KIILHNILTDESL--MEFIQTWGP--VTALSFRTDGPPMMVSGSNT---GHLTVWNLEDR 237 (583)
Q Consensus 185 -----~i~iw~~~~~~~~--~~~~~~~~~--v~~~~~~~~~~~~l~s~~~d---g~i~vwd~~~~ 237 (583)
.|+.|.+.+...- ..+...... ...+..++|++++++..... ..+.+.++..+
T Consensus 198 ~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 198 SGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp CGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred CCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 3788887766433 344443332 56888999999555554443 34778888764
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=98.02 E-value=2.5e-06 Score=79.98 Aligned_cols=206 Identities=17% Similarity=0.235 Sum_probs=132.3
Q ss_pred ccceEEEEEecC--CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC----CCcEEE
Q psy14906 248 RKVVTGAHFLYN--EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG----DSTLRI 321 (583)
Q Consensus 248 ~~~v~~~~~~~~--~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----dg~i~i 321 (583)
...+.|+++.-+ ...++.|..+|.|.+-.+..... ..-....++..+.++++|++-|.+.|++|-. |..+.+
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hd--Ss~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~I 133 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHD--SSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKI 133 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCccc--ccceecccccccccccccccccHHHHHhhhhhhcccCCccc
Confidence 345666666543 34788888899998886543321 2233456678889999999877788887743 667889
Q ss_pred EEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccccee
Q psy14906 322 FNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401 (583)
Q Consensus 322 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 401 (583)
||+.+.-....- . |.+..
T Consensus 134 wdi~s~ltvPke-----------------------------~--------------------------~~fs~------- 151 (783)
T KOG1008|consen 134 WDINSLLTVPKE-----------------------------S--------------------------PLFSS------- 151 (783)
T ss_pred eecccccCCCcc-----------------------------c--------------------------ccccc-------
Confidence 998765221000 0 00000
Q ss_pred eecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC-CCcEEEEeecC
Q psy14906 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN-LNQIVISGGND 480 (583)
Q Consensus 402 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~d 480 (583)
.......+++|-.+.+++.+|.....+.++|++....... .-.+..+..+..+| .+.++++-. |
T Consensus 152 --------~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~------svnTk~vqG~tVdp~~~nY~cs~~-d 216 (783)
T KOG1008|consen 152 --------STLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVS------SVNTKYVQGITVDPFSPNYFCSNS-D 216 (783)
T ss_pred --------ccccCccccccccCcchhhcccccchhhhhhhhhhhhhhh------hhhhhhcccceecCCCCCceeccc-c
Confidence 0002344788888899999999999999999873222111 12344567788888 777877766 8
Q ss_pred CcEEEEEccCCCCCceEEeeccC-----CeeeEEeccCCc-EEEEEeC-CceEEEEEcc
Q psy14906 481 QTVKVWHFKQTGKPPLRSIKLDN-----GISFFRTHQESS-MLAVCLD-DFTVNIIDID 532 (583)
Q Consensus 481 g~i~iwd~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~-~l~~~~~-dg~i~i~d~~ 532 (583)
|.|.+||....-+.++..+.+.. .+..++|+|... .+++... .++|+++|+.
T Consensus 217 g~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 217 GDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred CceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 99999994332224444443332 489999999654 5555544 5789999874
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.95 E-value=3.5e-05 Score=72.60 Aligned_cols=95 Identities=16% Similarity=0.224 Sum_probs=82.7
Q ss_pred CcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeE-EEEEecCCCCEEEEEcCCCcEEEEeCCCCeeh
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVT-ALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE 240 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 240 (583)
...|.-+.|+|.-.++|.+..+|.+.+..+. .+.+.++..|...++ +++|.|||+ +++.|-.||+|++-|.+++..+
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGk-llaVg~kdG~I~L~Dve~~~~l 97 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGK-LLAVGFKDGTIRLHDVEKGGRL 97 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCC-EEEEEecCCeEEEEEccCCCce
Confidence 4567889999999999999999999999997 888999997777777 999999999 9999999999999999998877
Q ss_pred hhhhhccccceEEEEEec
Q psy14906 241 NQIKKAHRKVVTGAHFLY 258 (583)
Q Consensus 241 ~~~~~~~~~~v~~~~~~~ 258 (583)
......-...|.++-|.+
T Consensus 98 ~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 98 VSFLFSVETDISKGIWDR 115 (665)
T ss_pred eccccccccchheeeccc
Confidence 774345567788888863
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.0011 Score=48.24 Aligned_cols=65 Identities=14% Similarity=0.238 Sum_probs=47.6
Q ss_pred eEEEEEec---C-CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEc
Q psy14906 251 VTGAHFLY---N-EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324 (583)
Q Consensus 251 v~~~~~~~---~-~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 324 (583)
|+++++.. | .+.|+.|+.|..|++| + ....+..+. -.+.|.+++-.. ...++.+..+|+|-+|+-
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf--~----~~e~~~Ei~-e~~~v~~L~~~~--~~~F~Y~l~NGTVGvY~~ 70 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVF--K----GDEIVAEIT-ETDKVTSLCSLG--GGRFAYALANGTVGVYDR 70 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEE--e----CCcEEEEEe-cccceEEEEEcC--CCEEEEEecCCEEEEEeC
Confidence 56666654 2 2589999999999999 3 234444444 345778887763 578999999999999974
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.012 Score=53.56 Aligned_cols=235 Identities=11% Similarity=0.115 Sum_probs=124.9
Q ss_pred eCeEEEEEcCCeEEEEeccceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEee---ccCCceEE
Q psy14906 82 DFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELS---FDNDTFKI 156 (583)
Q Consensus 82 ~~~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~~ 156 (583)
+.++++|..+| +.+++........-..+..+|..+ .++-+.|++-+ |+.+.++++..-....... ........
T Consensus 7 ~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~~ 84 (275)
T PF00780_consen 7 GDRLLVGTEDG-LYVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSLP 84 (275)
T ss_pred CCEEEEEECCC-EEEEEecCCccceeEeecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccccccccccc
Confidence 44677776666 888887221111111122237776 56666666655 5999999988754433110 00000000
Q ss_pred ecccCCcceEEEe---eCCCCCEEEEEecCCeEEEEEccCC-----ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCc
Q psy14906 157 MGKRWNSCVNVLE---PSPVVDIIGVGLSNKKIILHNILTD-----ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGH 228 (583)
Q Consensus 157 ~~~~~~~~i~~~~---~s~~~~~l~~~~~d~~i~iw~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 228 (583)
........+...+ -......|+++ ....|.+|.+... +..+++... ..+..++|.++ .++.|..+ .
T Consensus 85 ~~~~~~~~v~~f~~~~~~~~~~~L~va-~kk~i~i~~~~~~~~~f~~~~ke~~lp-~~~~~i~~~~~---~i~v~~~~-~ 158 (275)
T PF00780_consen 85 TKLPETKGVSFFAVNGGHEGSRRLCVA-VKKKILIYEWNDPRNSFSKLLKEISLP-DPPSSIAFLGN---KICVGTSK-G 158 (275)
T ss_pred ccccccCCeeEEeeccccccceEEEEE-ECCEEEEEEEECCcccccceeEEEEcC-CCcEEEEEeCC---EEEEEeCC-c
Confidence 0002233444444 22233455555 4458999888653 455666666 88999999944 56666644 5
Q ss_pred EEEEeCCCCeehhhhhhc-----------cccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCC
Q psy14906 229 LTVWNLEDRQVENQIKKA-----------HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP 297 (583)
Q Consensus 229 i~vwd~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v 297 (583)
..+.|+.++.....+... ...++..+.. +++.+|++- +..-...+.+. .......+.- ...+
T Consensus 159 f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~~--~~~g~fv~~~G---~~~r~~~i~W-~~~p 231 (275)
T PF00780_consen 159 FYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLCY--DNIGVFVNKNG---EPSRKSTIQW-SSAP 231 (275)
T ss_pred eEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEEe--cceEEEEcCCC---CcCcccEEEc-CCch
Confidence 888899866443222101 1123333333 345566543 33333343221 1111122222 2355
Q ss_pred eeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeecc
Q psy14906 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGI 335 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 335 (583)
.++++.. .+|+..+. +.|.+|++.+++..+.+..
T Consensus 232 ~~~~~~~---pyli~~~~-~~iEV~~~~~~~lvQ~i~~ 265 (275)
T PF00780_consen 232 QSVAYSS---PYLIAFSS-NSIEVRSLETGELVQTIPL 265 (275)
T ss_pred hEEEEEC---CEEEEECC-CEEEEEECcCCcEEEEEEC
Confidence 6777753 36776665 4599999999998887743
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >COG3386 Gluconolactonase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.0065 Score=54.95 Aligned_cols=173 Identities=13% Similarity=0.052 Sum_probs=104.5
Q ss_pred cEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec---------CCeEEEEEcc-CCceeEEEe
Q psy14906 132 NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS---------NKKIILHNIL-TDESLMEFI 201 (583)
Q Consensus 132 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---------d~~i~iw~~~-~~~~~~~~~ 201 (583)
-+.+++.+++..+..+...... ......+.....|+|.+-+.... ...-.+|-+. .+..+..+.
T Consensus 86 g~~~~~~~~~~~~t~~~~~~~~------~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~ 159 (307)
T COG3386 86 GVRLLDPDTGGKITLLAEPEDG------LPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLD 159 (307)
T ss_pred ccEEEeccCCceeEEeccccCC------CCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeec
Confidence 4677777766653333211110 22345667778888887776444 1112344444 566777677
Q ss_pred ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC--Ceeh----hhhhhccccceEEEEEecCCCEEEEEeCCC-eEEE
Q psy14906 202 QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED--RQVE----NQIKKAHRKVVTGAHFLYNEPLLVTSSPDN-TLKL 274 (583)
Q Consensus 202 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~--~~~~----~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-~i~~ 274 (583)
.+-..-+.|+||||++.++++=+..+.|.-|++.. +..- ........+..-.++...+|++.+++...| .|..
T Consensus 160 ~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~ 239 (307)
T COG3386 160 DDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVR 239 (307)
T ss_pred CcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEE
Confidence 66577789999999985555556668888888763 1111 111012334555677777888775554443 7888
Q ss_pred EEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC
Q psy14906 275 WIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 275 w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 315 (583)
|+. .++.+....-....+.+++|-.++.+.|+..+.
T Consensus 240 ~~p-----dG~l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~ 275 (307)
T COG3386 240 FNP-----DGKLLGEIKLPVKRPTNPAFGGPDLNTLYITSA 275 (307)
T ss_pred ECC-----CCcEEEEEECCCCCCccceEeCCCcCEEEEEec
Confidence 843 356666666666778899997555566665554
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.033 Score=54.14 Aligned_cols=61 Identities=18% Similarity=0.184 Sum_probs=40.6
Q ss_pred eEEEEEecCCCCEEEEEcCCCc----EEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC
Q psy14906 207 VTALSFRTDGPPMMVSGSNTGH----LTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD 269 (583)
Q Consensus 207 v~~~~~~~~~~~~l~s~~~dg~----i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 269 (583)
+....++|++++++++-+..|. ++++|+++++.+.... .......+.|.++++.|+....+
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i--~~~~~~~~~W~~d~~~~~y~~~~ 190 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGI--ENPKFSSVSWSDDGKGFFYTRFD 190 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEE--EEEESEEEEECTTSSEEEEEECS
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcc--cccccceEEEeCCCCEEEEEEeC
Confidence 3467889999955555455444 9999999997765331 11122339999998877766543
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0011 Score=66.84 Aligned_cols=142 Identities=11% Similarity=0.113 Sum_probs=97.8
Q ss_pred CEEEEE-eCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCC-----CCCEEEEEecCCeEEEEEccCCc
Q psy14906 122 PHLISV-DEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSP-----VVDIIGVGLSNKKIILHNILTDE 195 (583)
Q Consensus 122 ~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-----~~~~l~~~~~d~~i~iw~~~~~~ 195 (583)
++|+.- .....|+-.|++.|+.+....+. ...+|..++-.. .......|-.+..+..||.+-..
T Consensus 494 ~mil~~~~~~~~ly~mDLe~GKVV~eW~~~----------~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~ 563 (794)
T PF08553_consen 494 NMILLDPNNPNKLYKMDLERGKVVEEWKVH----------DDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSG 563 (794)
T ss_pred ceEeecCCCCCceEEEecCCCcEEEEeecC----------CCcceeEecccccccccCCCceEEEECCCceEEeccCCCC
Confidence 344432 34578999999999999999842 223355544321 12345567778889999987532
Q ss_pred --eeEE-Ee--ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCC
Q psy14906 196 --SLME-FI--QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN 270 (583)
Q Consensus 196 --~~~~-~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 270 (583)
.+.. .. .......|++-+.+| .+|+|+.+|.||+||-- ++..++...+-..+|..|..+.||+++++.+ +.
T Consensus 564 ~k~v~~~~k~Y~~~~~Fs~~aTt~~G--~iavgs~~G~IRLyd~~-g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~t 639 (794)
T PF08553_consen 564 NKLVDSQSKQYSSKNNFSCFATTEDG--YIAVGSNKGDIRLYDRL-GKRAKTALPGLGDPIIGIDVTADGKWILATC-KT 639 (794)
T ss_pred CceeeccccccccCCCceEEEecCCc--eEEEEeCCCcEEeeccc-chhhhhcCCCCCCCeeEEEecCCCcEEEEee-cc
Confidence 2211 11 223567888888888 59999999999999954 4445554467789999999999999988776 45
Q ss_pred eEEEEEc
Q psy14906 271 TLKLWIF 277 (583)
Q Consensus 271 ~i~~w~~ 277 (583)
.+.|++.
T Consensus 640 yLlLi~t 646 (794)
T PF08553_consen 640 YLLLIDT 646 (794)
T ss_pred eEEEEEE
Confidence 6677754
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=97.79 E-value=9.8e-05 Score=69.69 Aligned_cols=80 Identities=16% Similarity=0.161 Sum_probs=72.5
Q ss_pred ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeeccccccee-eEEecCCCcEEEEEeCCCeEEEEeCCCcccc
Q psy14906 501 LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLT-DADFSPDSRWLITASMDCTIRVWDIPSSQLI 579 (583)
Q Consensus 501 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~-~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~ 579 (583)
....+..+.|+|.-.++|.+..+|.+.+..+. .+.+.++.-|...++ +++|.|||+.||.|-.||+|++-|+++|..+
T Consensus 19 l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l 97 (665)
T KOG4640|consen 19 LPINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRL 97 (665)
T ss_pred cccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCce
Confidence 34568889999999999999999999999998 788888887888888 9999999999999999999999999999887
Q ss_pred cc
Q psy14906 580 DC 581 (583)
Q Consensus 580 ~~ 581 (583)
..
T Consensus 98 ~~ 99 (665)
T KOG4640|consen 98 VS 99 (665)
T ss_pred ec
Confidence 65
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00054 Score=69.05 Aligned_cols=135 Identities=16% Similarity=0.234 Sum_probs=94.7
Q ss_pred cCceEEEEEcccCccccccCCCCCCCcc-cCeeEEEEeC-----CCcEEEEeecCCcEEEEEccCCCCCceE----Eeec
Q psy14906 432 SSGHVDRFNIQSGAHRGSYGHDNQPGHV-GGVRGVVSDN-----LNQIVISGGNDQTVKVWHFKQTGKPPLR----SIKL 501 (583)
Q Consensus 432 ~dg~i~i~d~~~~~~~~~~~~~~~~~h~-~~v~~~~~s~-----~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~~~ 501 (583)
....|+-.|++.|+.+..+ ..|. .+|..++-.. +..-.+.|-.+..+..||.+-...+++. .+..
T Consensus 502 ~~~~ly~mDLe~GKVV~eW-----~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~ 576 (794)
T PF08553_consen 502 NPNKLYKMDLERGKVVEEW-----KVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSS 576 (794)
T ss_pred CCCceEEEecCCCcEEEEe-----ecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeecccccccc
Confidence 4578999999999999998 3444 3366554321 1223455666788999999875423332 2223
Q ss_pred cCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 502 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
.....|++-+.+| +||+|+.+|.|++||--..+....+.+-..+|.+|..+.||++|+..+ +..|.+++.
T Consensus 577 ~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 577 KNNFSCFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred CCCceEEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 3467777777655 789999999999999543333344667789999999999999988665 566777775
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.77 E-value=7.5e-05 Score=43.75 Aligned_cols=39 Identities=44% Similarity=0.863 Sum_probs=34.1
Q ss_pred cceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEe
Q psy14906 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 534 ~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~ 572 (583)
++.+..+..|...|.++.|.+++.++++++.|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 345566778899999999999999999999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.0045 Score=45.21 Aligned_cols=100 Identities=16% Similarity=0.187 Sum_probs=72.2
Q ss_pred eeEEEEeC---CC-cEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceE
Q psy14906 462 VRGVVSDN---LN-QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTII 537 (583)
Q Consensus 462 v~~~~~s~---~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 537 (583)
|+++++.. || +.|+.|+.|..|++|+-+ ..+..+...+.+++++-... ..++.+..+|+|-+|+- ...+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~----e~~~Ei~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~--~~Rl 74 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD----EIVAEITETDKVTSLCSLGG-GRFAYALANGTVGVYDR--SQRL 74 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC----cEEEEEecccceEEEEEcCC-CEEEEEecCCEEEEEeC--ccee
Confidence 56666654 32 589999999999999854 67888888889999988876 56888999999999975 3334
Q ss_pred EeecccccceeeEEecC---CC-cEEEEEeCCCeEE
Q psy14906 538 RKLSGHMGQLTDADFSP---DS-RWLITASMDCTIR 569 (583)
Q Consensus 538 ~~~~~h~~~v~~l~~s~---d~-~~l~s~~~d~~i~ 569 (583)
.+.+. +..++++++.. || .-|++|-.+|.|-
T Consensus 75 WRiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 75 WRIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred eeecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 44443 23366665543 33 2588888888774
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0025 Score=63.44 Aligned_cols=180 Identities=13% Similarity=0.147 Sum_probs=100.0
Q ss_pred EccCCCEEEEEe------CCC--cEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC-----
Q psy14906 117 ILPFGPHLISVD------EES--NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN----- 183 (583)
Q Consensus 117 is~~~~~l~s~~------~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----- 183 (583)
++|+|+.+|..- .|+ .|.+++.. ++. ..+. . ....+.-.|+|||+.|++....
T Consensus 357 iSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt-----------~-g~~~t~PsWspDG~~lw~v~dg~~~~~ 422 (591)
T PRK13616 357 LSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVL-----------E-GHSLTRPSWSLDADAVWVVVDGNTVVR 422 (591)
T ss_pred ECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeee-----------c-CCCCCCceECCCCCceEEEecCcceEE
Confidence 599999888765 244 44444542 222 3332 1 2237888999998877776432
Q ss_pred -------CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEE---EeCCCCee-h---hhhhhcccc
Q psy14906 184 -------KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTV---WNLEDRQV-E---NQIKKAHRK 249 (583)
Q Consensus 184 -------~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~v---wd~~~~~~-~---~~~~~~~~~ 249 (583)
+.+.+.++..++... ...+.|..+.|+|||.++++.. +|.|.+ -....|+. + ..+..+-..
T Consensus 423 v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~--~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~ 497 (591)
T PRK13616 423 VIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII--GGKVYLAVVEQTEDGQYALTNPREVGPGLGD 497 (591)
T ss_pred EeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE--CCEEEEEEEEeCCCCceeecccEEeecccCC
Confidence 234444444443322 2236799999999999554444 467776 44344531 1 112122334
Q ss_pred ceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEE
Q psy14906 250 VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLR 320 (583)
Q Consensus 250 ~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 320 (583)
.+.++.|..++.++ .+..++...+|.++........+ .-.....++..++-.+ ..++....++.+.
T Consensus 498 ~~~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~~~-~~~n~~~~v~~vaa~~---~~iyv~~~~g~~~ 563 (591)
T PRK13616 498 TAVSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSDAL-PSRNLSAPVVAVAASP---STVYVTDARAVLQ 563 (591)
T ss_pred ccccceEecCCEEE-EEecCCCCceEEEecCCcccccc-CCCCccCceEEEecCC---ceEEEEcCCceEE
Confidence 46889999999855 55555556677665532221110 1111345666776653 2455556666433
|
|
| >PRK13616 lipoprotein LpqB; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.0014 Score=65.18 Aligned_cols=147 Identities=12% Similarity=0.069 Sum_probs=89.5
Q ss_pred CCceEEEEccCCcEEEEEe------cC--ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecC----
Q psy14906 413 SKPTCVYITHCGNFVLIGY------SS--GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGND---- 480 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~------~d--g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---- 480 (583)
..+...+++|+|+.++... .| ..|.+++.. +.. ..+. .+. ..+...|+|||+.|++....
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt----~g~--~~t~PsWspDG~~lw~v~dg~~~~ 421 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVL----EGH--SLTRPSWSLDADAVWVVVDGNTVV 421 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeee----cCC--CCCCceECCCCCceEEEecCcceE
Confidence 3578899999999887765 23 356666642 222 2221 222 37889999998877776532
Q ss_pred --------CcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEE---EEccccce-E---Eeec-ccc
Q psy14906 481 --------QTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNI---IDIDTCTI-I---RKLS-GHM 544 (583)
Q Consensus 481 --------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i---~d~~~~~~-~---~~~~-~h~ 544 (583)
+.+.+.+++.+ .... .....|..+.|||||..+|... ++.|++ -....|+. + ..+. +-.
T Consensus 422 ~v~~~~~~gql~~~~vd~g--e~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~ 496 (591)
T PRK13616 422 RVIRDPATGQLARTPVDAS--AVAS--RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLG 496 (591)
T ss_pred EEeccCCCceEEEEeccCc--hhhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccC
Confidence 23333344433 2222 3356799999999999888866 477877 44444541 1 1122 223
Q ss_pred cceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 545 GQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 545 ~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
..+.++.|..++.++ .+..++.-.+|.+
T Consensus 497 ~~~~~l~W~~~~~L~-V~~~~~~~~v~~v 524 (591)
T PRK13616 497 DTAVSLDWRTGDSLV-VGRSDPEHPVWYV 524 (591)
T ss_pred CccccceEecCCEEE-EEecCCCCceEEE
Confidence 346889999999855 4444554445554
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.1 Score=53.84 Aligned_cols=117 Identities=13% Similarity=0.087 Sum_probs=73.6
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeC----------------CCCCEEEEEecCC
Q psy14906 121 GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPS----------------PVVDIIGVGLSNK 184 (583)
Q Consensus 121 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s----------------~~~~~l~~~~~d~ 184 (583)
+..|+.++.++.|.-.|..+|+.+.++......... ..+ ...+.+++- ..+..++.++.|+
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~--~~~-~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg 270 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAG--RQH-QTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDA 270 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccc--ccc-ccccceEEecCCcccccccccccccccCCEEEEecCCC
Confidence 567777778889999999999998887654221000 000 001122221 1345788899999
Q ss_pred eEEEEEccCCceeEEEeccCCCeE-------------EEEEec---CCCCEEEEEcC----------CCcEEEEeCCCCe
Q psy14906 185 KIILHNILTDESLMEFIQTWGPVT-------------ALSFRT---DGPPMMVSGSN----------TGHLTVWNLEDRQ 238 (583)
Q Consensus 185 ~i~iw~~~~~~~~~~~~~~~~~v~-------------~~~~~~---~~~~~l~s~~~----------dg~i~vwd~~~~~ 238 (583)
.+.-.|.++|+.+..+... +.|. .+.-.| ++ .++.|+. +|.|+-+|.++|+
T Consensus 271 ~LiALDA~TGk~~W~fg~~-G~vdl~~~~g~~~~g~~~~ts~P~V~~g--~VIvG~~v~d~~~~~~~~G~I~A~Da~TGk 347 (764)
T TIGR03074 271 RLIALDADTGKLCEDFGNN-GTVDLTAGMGTTPPGYYYPTSPPLVAGT--TVVIGGRVADNYSTDEPSGVIRAFDVNTGA 347 (764)
T ss_pred eEEEEECCCCCEEEEecCC-CceeeecccCcCCCcccccccCCEEECC--EEEEEecccccccccCCCcEEEEEECCCCc
Confidence 9999999999999876432 2221 011111 23 4566642 6889999999998
Q ss_pred ehhhh
Q psy14906 239 VENQI 243 (583)
Q Consensus 239 ~~~~~ 243 (583)
++-.+
T Consensus 348 l~W~~ 352 (764)
T TIGR03074 348 LVWAW 352 (764)
T ss_pred EeeEE
Confidence 87665
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=97.62 E-value=5.2e-05 Score=62.25 Aligned_cols=105 Identities=17% Similarity=0.261 Sum_probs=75.0
Q ss_pred CcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeee-EEeccCCcEEEEEeCCceEEEEEccccceEEeecccc-ccee
Q psy14906 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF-FRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM-GQLT 548 (583)
Q Consensus 471 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~-~~v~ 548 (583)
+..++.|+.+|.|.+|.........-........+.+ +.-..++.+..++..+|.|+.|+++..+.+.....|. .++.
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e 149 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGE 149 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcc
Confidence 4568899999999999886432111111112222322 2333456688999999999999999999988888887 6777
Q ss_pred eEEecCCCcEEEEE--eCCCeEEEEeCCC
Q psy14906 549 DADFSPDSRWLITA--SMDCTIRVWDIPS 575 (583)
Q Consensus 549 ~l~~s~d~~~l~s~--~~d~~i~vw~~~~ 575 (583)
.+..+..+++|+.+ |.|..++.|++..
T Consensus 150 ~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 150 ELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred eeEEecCCceEEeeccccchhhhhcchhh
Confidence 77777777788877 8888888888764
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0091 Score=56.07 Aligned_cols=80 Identities=15% Similarity=0.175 Sum_probs=58.2
Q ss_pred CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccc----eeeEEecCC--------------CcE-EEEEe
Q psy14906 503 NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ----LTDADFSPD--------------SRW-LITAS 563 (583)
Q Consensus 503 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~----v~~l~~s~d--------------~~~-l~s~~ 563 (583)
..+.+++.+|++++.|+.+.-|+|.++|+.++..++.++|-.+. +....-... ..+ ++-+-
T Consensus 308 R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyap 387 (415)
T PF14655_consen 308 REGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAP 387 (415)
T ss_pred ceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEec
Confidence 35888999999999999888899999999999988888765432 111100000 112 34566
Q ss_pred CCCeEEEEeCCCccccccc
Q psy14906 564 MDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 564 ~d~~i~vw~~~~~~~~~~~ 582 (583)
.-|.|.||.+++|..+..|
T Consensus 388 rRg~lEvW~~~~g~Rv~a~ 406 (415)
T PF14655_consen 388 RRGILEVWSMRQGPRVAAF 406 (415)
T ss_pred cCCeEEEEecCCCCEEEEE
Confidence 7899999999999988765
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.025 Score=48.68 Aligned_cols=230 Identities=11% Similarity=0.070 Sum_probs=133.6
Q ss_pred cEEEEEeCCCceEEEEe-eCCeEEEEecCCcEEEeecCC----CCCCeEEEEeeCeEEEEEcC------CeEEEEeccc-
Q psy14906 34 VVARFIRRRKETLFVTC-VGKAFHVYGCNHFKLLSVSPQ----HEDDITCLSSDFFHIYTSAN------NIIYAWRRGI- 101 (583)
Q Consensus 34 ~~~~~~p~~~~~~i~~~-~~~~i~v~d~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~~~~------~~i~vw~~~~- 101 (583)
.-+.++|..+.-+.+.- -+-...++|.++.+...++.. |--.=-+++.||.++++..+ |.|-|||...
T Consensus 71 Hgi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~ 150 (366)
T COG3490 71 HGIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREG 150 (366)
T ss_pred CCeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccc
Confidence 34556666555444333 455677888888776655532 32222356779999998743 4799999643
Q ss_pred -eeeeeecccCccEEEE--ccCCCEEEEEeC------------------CCcEEEEEcCCCcEEEEeeccCCceEEeccc
Q psy14906 102 -DIVGTYKGHTSPVHLI--LPFGPHLISVDE------------------ESNVKVWDIKAEETYLELSFDNDTFKIMGKR 160 (583)
Q Consensus 102 -~~~~~~~~h~~~v~~i--s~~~~~l~s~~~------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 160 (583)
..+..+..|.-.-..+ .+||+.|+.+.. .-.+.+.|..+|+.+.+..+..+ .
T Consensus 151 fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~-------l 223 (366)
T COG3490 151 FQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPAS-------L 223 (366)
T ss_pred cceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchh-------h
Confidence 4455566665444444 899999888642 11344555555555544433211 3
Q ss_pred CCcceEEEeeCCCCCEEEEEecCCe-----EEEEEccCCceeEEEecc-------CCCeEEEEEecCCCCEEEEEcCCCc
Q psy14906 161 WNSCVNVLEPSPVVDIIGVGLSNKK-----IILHNILTDESLMEFIQT-------WGPVTALSFRTDGPPMMVSGSNTGH 228 (583)
Q Consensus 161 ~~~~i~~~~~s~~~~~l~~~~~d~~-----i~iw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~s~~~dg~ 228 (583)
+.-.|..++..+||+.++-+-..|. -.+=-...++.+.-+... ..-|-+++.+.+...+.++.-..+.
T Consensus 224 ~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~ 303 (366)
T COG3490 224 RQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNR 303 (366)
T ss_pred hhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCe
Confidence 4567889999999988776654432 111111234444433321 1356678887766634455555566
Q ss_pred EEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy14906 229 LTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275 (583)
Q Consensus 229 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w 275 (583)
..+||..+|..+..-... ....++ +...-++..+.+|.+.++
T Consensus 304 ~vi~da~tG~vv~~a~l~---daaGva--~~~~gf~vssg~G~~~~~ 345 (366)
T COG3490 304 AVIWDAATGAVVSEAALP---DAAGVA--AAKGGFAVSSGQGRIIFY 345 (366)
T ss_pred EEEEEcCCCcEEeccccc---ccccce--eccCceEEecCCceEEec
Confidence 889999999877654111 112222 233335666667877777
|
|
| >COG3490 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.017 Score=49.65 Aligned_cols=197 Identities=9% Similarity=0.015 Sum_probs=112.9
Q ss_pred CEEEEEeCCCc-EEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec-----CCeEEEEEccCC-
Q psy14906 122 PHLISVDEESN-VKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS-----NKKIILHNILTD- 194 (583)
Q Consensus 122 ~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----d~~i~iw~~~~~- 194 (583)
.-++.+-.-|+ ..++|..+.+...++..... ..-.-.=.|||||.+|...-. .|.|-|||.+.+
T Consensus 81 ravafARrPGtf~~vfD~~~~~~pv~~~s~~~---------RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~f 151 (366)
T COG3490 81 RAVAFARRPGTFAMVFDPNGAQEPVTLVSQEG---------RHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGF 151 (366)
T ss_pred ceEEEEecCCceEEEECCCCCcCcEEEecccC---------ceeecccccCCCCcEEEeecCCCCCCCceEEEEeccccc
Confidence 44555555454 67888888777666653211 111222469999999987543 378999998744
Q ss_pred ceeEEEeccCCCeEEEEEecCCCCEEEEEcC------------------CCcEEEEeCCCCeehhhhhh---ccccceEE
Q psy14906 195 ESLMEFIQTWGPVTALSFRTDGPPMMVSGSN------------------TGHLTVWNLEDRQVENQIKK---AHRKVVTG 253 (583)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~------------------dg~i~vwd~~~~~~~~~~~~---~~~~~v~~ 253 (583)
+.+.++..|.-....+.+.+||+ .++.+.. .-.+.+.|..+|+++.+... -+.-.|..
T Consensus 152 qrvgE~~t~GiGpHev~lm~DGr-tlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRH 230 (366)
T COG3490 152 QRVGEFSTHGIGPHEVTLMADGR-TLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRH 230 (366)
T ss_pred ceecccccCCcCcceeEEecCCc-EEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceee
Confidence 56677888877778899999999 5555432 12344556556655543311 24456778
Q ss_pred EEEecCCCEEEEEeCCCeEE----EEEccCCCCCceeeEEec-------cCCCCCeeEEEeeCCCCEEEEeeCCCcEEEE
Q psy14906 254 AHFLYNEPLLVTSSPDNTLK----LWIFDKADGNGRLLRIRE-------GHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322 (583)
Q Consensus 254 ~~~~~~~~~l~s~~~d~~i~----~w~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 322 (583)
++..+||...+.+-..|.-. +--... .++.+..+. .....|-+++.+..++-..++.-..+...+|
T Consensus 231 ld~g~dgtvwfgcQy~G~~~d~ppLvg~~~---~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~ 307 (366)
T COG3490 231 LDIGRDGTVWFGCQYRGPRNDLPPLVGHFR---KGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIW 307 (366)
T ss_pred eeeCCCCcEEEEEEeeCCCccCCcceeecc---CCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEE
Confidence 88888887666554333100 000000 111121111 1223566777764344444444455667789
Q ss_pred Eccccccce
Q psy14906 323 NTKSETSNK 331 (583)
Q Consensus 323 d~~~~~~~~ 331 (583)
|..++....
T Consensus 308 da~tG~vv~ 316 (366)
T COG3490 308 DAATGAVVS 316 (366)
T ss_pred EcCCCcEEe
Confidence 988876544
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.049 Score=47.30 Aligned_cols=195 Identities=12% Similarity=0.041 Sum_probs=118.5
Q ss_pred eeeeeeeee---cCcccEEEEEeCCCceEEEEe--eCCeEEEEecCCcEEEeecCCCCCCeE--EEEe-eCeEE-EEEcC
Q psy14906 21 RHRALGYVS---NHLPVVARFIRRRKETLFVTC--VGKAFHVYGCNHFKLLSVSPQHEDDIT--CLSS-DFFHI-YTSAN 91 (583)
Q Consensus 21 ~~~~~g~~~---~~~~~~~~~~p~~~~~~i~~~--~~~~i~v~d~~~~~~~~~~~~h~~~v~--~~~~-~~~~~-~~~~~ 91 (583)
.|+++..+. +...+-+.|..+ ..++-.++ ....|+.+|+++++.+....-. .... .++. ++++. .+=.+
T Consensus 32 ~~~vv~~ypHd~~aFTQGL~~~~~-g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~-~~~FgEGit~~~d~l~qLTWk~ 109 (264)
T PF05096_consen 32 SYEVVETYPHDPTAFTQGLEFLDD-GTLYESTGLYGQSSLRKVDLETGKVLQSVPLP-PRYFGEGITILGDKLYQLTWKE 109 (264)
T ss_dssp EEEEEEEEE--TT-EEEEEEEEET-TEEEEEECSTTEEEEEEEETTTSSEEEEEE-T-TT--EEEEEEETTEEEEEESSS
T ss_pred eeEEEEECCCCCcccCccEEecCC-CEEEEeCCCCCcEEEEEEECCCCcEEEEEECC-ccccceeEEEECCEEEEEEecC
Confidence 467777444 222344556423 34444444 3458999999998876543211 1111 2222 34433 34477
Q ss_pred CeEEEEecc-ceeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEee
Q psy14906 92 NIIYAWRRG-IDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEP 170 (583)
Q Consensus 92 ~~i~vw~~~-~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 170 (583)
+...+||.+ .+.+.++.- .+.=+.+..||+.|+.......|..+|.++.+...++...... ..-..++-+.+
T Consensus 110 ~~~f~yd~~tl~~~~~~~y-~~EGWGLt~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g------~pv~~LNELE~ 182 (264)
T PF05096_consen 110 GTGFVYDPNTLKKIGTFPY-PGEGWGLTSDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNG------RPVSNLNELEY 182 (264)
T ss_dssp SEEEEEETTTTEEEEEEE--SSS--EEEECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETT------EE---EEEEEE
T ss_pred CeEEEEccccceEEEEEec-CCcceEEEcCCCEEEEECCccceEEECCcccceEEEEEEEECC------EECCCcEeEEE
Confidence 899999974 455555542 2344556688888888777789999999998888877654221 12345667777
Q ss_pred CCCCCEEEEEecCCeEEEEEccCCceeEEEec---------------cCCCeEEEEEecCCCCEEEEEcC
Q psy14906 171 SPVVDIIGVGLSNKKIILHNILTDESLMEFIQ---------------TWGPVTALSFRTDGPPMMVSGSN 225 (583)
Q Consensus 171 s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~---------------~~~~v~~~~~~~~~~~~l~s~~~ 225 (583)
- +|...|=.-....|...|..+|+.+..+.. ...-.+.|+|.|..+.+++||-.
T Consensus 183 i-~G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK~ 251 (264)
T PF05096_consen 183 I-NGKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGKL 251 (264)
T ss_dssp E-TTEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEETT
T ss_pred E-cCEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeCC
Confidence 6 787778777788899999999998877631 12457999999998867777753
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.048 Score=47.22 Aligned_cols=280 Identities=9% Similarity=0.076 Sum_probs=152.4
Q ss_pred CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccc-cceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHR-KVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN 283 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~ 283 (583)
+-+..+.++.+ ++..+..+.-+++.|+.+......+..-.. +.-.+ |.-.|++...+..|.-+.+.|+..+. .
T Consensus 87 ~l~~Dv~vse~---yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyayg--v~vsGn~aYVadlddgfLivdvsdps-s 160 (370)
T COG5276 87 DLFADVRVSEE---YVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYG--VYVSGNYAYVADLDDGFLIVDVSDPS-S 160 (370)
T ss_pred hhhheeEeccc---EEEEEcCCCceEEEeccCCCCcceeccccCCceEEE--EEecCCEEEEeeccCcEEEEECCCCC-C
Confidence 66777788765 567777777899999987654333311112 22233 44468888888866667788765443 3
Q ss_pred ceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccce
Q psy14906 284 GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQ 363 (583)
Q Consensus 284 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (583)
..+..........-..++.+ |++-..+..|+-+.+-|+........+++-
T Consensus 161 P~lagrya~~~~d~~~v~IS---Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~--------------------------- 210 (370)
T COG5276 161 PQLAGRYALPGGDTHDVAIS---GNYAYVAWRDGGLTIVDVSNPHSPVLIGSY--------------------------- 210 (370)
T ss_pred ceeeeeeccCCCCceeEEEe---cCeEEEEEeCCCeEEEEccCCCCCeEEEEE---------------------------
Confidence 34444444444444566664 678888889999999998775433222111
Q ss_pred eeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEccc
Q psy14906 364 FSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQS 443 (583)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 443 (583)
|.. ..+.++..+++-.+++... ..+.+-|...
T Consensus 211 ---------------------------n~g-------------------~g~~sv~vsdnr~y~vvy~--egvlivd~s~ 242 (370)
T COG5276 211 ---------------------------NTG-------------------PGTYSVSVSDNRAYLVVYD--EGVLIVDVSG 242 (370)
T ss_pred ---------------------------ecC-------------------CceEEEEecCCeeEEEEcc--cceEEEecCC
Confidence 000 2455666666655555543 2366667665
Q ss_pred CccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceE-EeeccC-CeeeEEeccCCcEEEEEe
Q psy14906 444 GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLR-SIKLDN-GISFFRTHQESSMLAVCL 521 (583)
Q Consensus 444 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~-~v~~~~~s~~~~~l~~~~ 521 (583)
......+.... ......++.+.. .+++......+.-+.+-|+++.....+. .+...+ .-..+.. -+.++..+.
T Consensus 243 ~ssp~~~gsye-t~~p~~~s~v~V--s~~~~Yvadga~gl~~idisnp~spfl~ss~~t~g~~a~gi~a--y~~y~yiad 317 (370)
T COG5276 243 PSSPTVFGSYE-TSNPVSISTVPV--SGEYAYVADGAKGLPIIDISNPPSPFLSSSLDTAGYQAAGIRA--YGNYNYIAD 317 (370)
T ss_pred CCCceEeeccc-cCCcccccceec--ccceeeeeccccCceeEeccCCCCCchhccccCCCccccceEE--ecCeeEecc
Confidence 55333332100 111112222333 4556666666666777777765322221 111111 2222222 234444444
Q ss_pred CCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 522 DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 522 ~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
.+ ...+-+....+......+-...+.+.+.+-+.+.+.+...++-+.+|+..
T Consensus 318 kn-~g~vV~~s~~s~m~~~~g~~ti~~s~~v~~~~q~~y~~d~~~gl~i~~~~ 369 (370)
T COG5276 318 KN-TGAVVDASPPSMMDKRPGRPTIGQSCDVSVDTQIIYSTDYNGGLSIIEYL 369 (370)
T ss_pred CC-ceEEEeCCChhhcccccCcceEeeecceEEEeeEEEEeecCCCEEEEEec
Confidence 44 44455554444333333333345555555567788888899999999853
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.032 Score=51.68 Aligned_cols=157 Identities=17% Similarity=0.172 Sum_probs=78.3
Q ss_pred ceEEEEccCCcEEEEEe------cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec---------
Q psy14906 415 PTCVYITHCGNFVLIGY------SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN--------- 479 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~--------- 479 (583)
...+..-|+|+.++++- ..|.+.++|-++.+....+... .+....-..+-|.|..+.++|...
T Consensus 132 PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf~v~g~We~~--~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~G 209 (461)
T PF05694_consen 132 PHTVHCLPDGRIMISALGDADGNGPGGFVLLDGETFEVKGRWEKD--RGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKG 209 (461)
T ss_dssp EEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT--EEEE--SB---TT------EEEETTTTEEEE-B---HHHHTT-
T ss_pred CceeeecCCccEEEEeccCCCCCCCCcEEEEcCccccccceeccC--CCCCCCCCCeEEcCCCCEEEEeccCChhhcccC
Confidence 34455566777776643 2356888888877777666432 233445567788888888887643
Q ss_pred -----------CCcEEEEEccCCCCCceEEeeccC---CeeeEEeccC--CcEEEEEe-CCceEEEEEc-cccc----eE
Q psy14906 480 -----------DQTVKVWHFKQTGKPPLRSIKLDN---GISFFRTHQE--SSMLAVCL-DDFTVNIIDI-DTCT----II 537 (583)
Q Consensus 480 -----------dg~i~iwd~~~~~~~~~~~~~~~~---~v~~~~~s~~--~~~l~~~~-~dg~i~i~d~-~~~~----~~ 537 (583)
..++.+||+.+. ++++.+.... .+..+.|..+ ..+=++++ -.++|..|-- +.++ .+
T Consensus 210 f~~~d~~~~~yG~~l~vWD~~~r--~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kV 287 (461)
T PF05694_consen 210 FNPEDLEAGKYGHSLHVWDWSTR--KLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKV 287 (461)
T ss_dssp --TTTHHHH-S--EEEEEETTTT--EEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEE
T ss_pred CChhHhhcccccCeEEEEECCCC--cEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEE
Confidence 347999999998 8888888763 4556777644 44433332 3344444433 3332 11
Q ss_pred Eeecc-----------------cccceeeEEecCCCcEEEEEe-CCCeEEEEeCCC
Q psy14906 538 RKLSG-----------------HMGQLTDADFSPDSRWLITAS-MDCTIRVWDIPS 575 (583)
Q Consensus 538 ~~~~~-----------------h~~~v~~l~~s~d~~~l~s~~-~d~~i~vw~~~~ 575 (583)
..+.. -..-|++|..|.|.++|..++ .+|.|+.||+.+
T Consensus 288 i~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISD 343 (461)
T PF05694_consen 288 IDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISD 343 (461)
T ss_dssp EEE--EE--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SS
T ss_pred EECCCcccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCC
Confidence 11111 024589999999999987554 689999999976
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00049 Score=40.03 Aligned_cols=39 Identities=33% Similarity=0.668 Sum_probs=33.7
Q ss_pred CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q psy14906 194 DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWN 233 (583)
Q Consensus 194 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 233 (583)
++.+..+..|...|.++.|.+++. ++++++.|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGK-YLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCC-EEEEecCCCeEEEcC
Confidence 345667778888999999999887 899999999999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00058 Score=68.89 Aligned_cols=103 Identities=16% Similarity=0.243 Sum_probs=81.1
Q ss_pred CCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceee
Q psy14906 470 LNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTD 549 (583)
Q Consensus 470 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~ 549 (583)
.+..++.|+..|.+...|...+-....+.....++|++++|+.+|+.++.|-.+|.|.+||+..++.++.+..|..+.+.
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~ 177 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTG 177 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccce
Confidence 45678888888999998887752233445556689999999999999999999999999999999999988877777665
Q ss_pred EE---ecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 550 AD---FSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 550 l~---~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
+- +..++..+.++..-|. +|++.
T Consensus 178 vi~v~~t~~nS~llt~D~~Gs--f~~lv 203 (1206)
T KOG2079|consen 178 VIFVGRTSQNSKLLTSDTGGS--FWKLV 203 (1206)
T ss_pred EEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence 54 4456667888877775 66653
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.061 Score=44.88 Aligned_cols=50 Identities=14% Similarity=0.184 Sum_probs=41.9
Q ss_pred ceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC
Q psy14906 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN 469 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 469 (583)
...+++..+|.+.++..+.|+|..+|..+|+.+.++ .-....|++++|--
T Consensus 214 PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~ei-----klPt~qitsccFgG 263 (310)
T KOG4499|consen 214 PDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEI-----KLPTPQITSCCFGG 263 (310)
T ss_pred CCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEE-----EcCCCceEEEEecC
Confidence 345666778999999999999999999999999988 45578899999954
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.015 Score=58.22 Aligned_cols=191 Identities=10% Similarity=0.028 Sum_probs=99.4
Q ss_pred ccCCCEEEEEeCC------CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCC-----eE
Q psy14906 118 LPFGPHLISVDEE------SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNK-----KI 186 (583)
Q Consensus 118 s~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~-----~i 186 (583)
..++...+.||.+ ..+..+|..+..-...-... ......... .-+++..+.|+.++ ++
T Consensus 301 ~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~---------~~R~~~~~~--~~~g~IYviGG~~~~~~~~sv 369 (557)
T PHA02713 301 IVDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMI---------KNRCRFSLA--VIDDTIYAIGGQNGTNVERTI 369 (557)
T ss_pred EECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCc---------chhhceeEE--EECCEEEEECCcCCCCCCceE
Confidence 4566666666643 34677887765432111110 111111112 22577778887653 47
Q ss_pred EEEEccCCceeE--EEeccCCCeEEEEEecCCCCEEEEEcCCC-----------------------cEEEEeCCCCeeh-
Q psy14906 187 ILHNILTDESLM--EFIQTWGPVTALSFRTDGPPMMVSGSNTG-----------------------HLTVWNLEDRQVE- 240 (583)
Q Consensus 187 ~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~dg-----------------------~i~vwd~~~~~~~- 240 (583)
..||..+.+-.. .+.........+ .-++. +.+.|+.++ .+..||..+.+-.
T Consensus 370 e~Ydp~~~~W~~~~~mp~~r~~~~~~--~~~g~-IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~ 446 (557)
T PHA02713 370 ECYTMGDDKWKMLPDMPIALSSYGMC--VLDQY-IYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWET 446 (557)
T ss_pred EEEECCCCeEEECCCCCcccccccEE--EECCE-EEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEee
Confidence 889987653322 222111111122 23565 777777542 4778888876432
Q ss_pred -hhhhhccccceEEEEEecCCCEEEEEeCCC------eEEEEEccCCC-CCceeeEEeccCCCCCeeEEEeeCCCCEEEE
Q psy14906 241 -NQIKKAHRKVVTGAHFLYNEPLLVTSSPDN------TLKLWIFDKAD-GNGRLLRIREGHSAPPNYIQFYGNSSDNILS 312 (583)
Q Consensus 241 -~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~------~i~~w~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 312 (583)
..+. ......-...-+++..+.||.++ .+..| |..+ ..+..+..+....... .++.. ++...++
T Consensus 447 v~~m~---~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Y--dp~~~~~W~~~~~m~~~r~~~-~~~~~--~~~iyv~ 518 (557)
T PHA02713 447 LPNFW---TGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRY--NTNTYNGWELITTTESRLSAL-HTILH--DNTIMML 518 (557)
T ss_pred cCCCC---cccccCcEEEECCEEEEEeCCCCCCccceeEEEe--cCCCCCCeeEccccCcccccc-eeEEE--CCEEEEE
Confidence 2221 11111112233577777776542 34556 5544 3555555554433332 33333 6888889
Q ss_pred eeCCC--cEEEEEccccccc
Q psy14906 313 AAGDS--TLRIFNTKSETSN 330 (583)
Q Consensus 313 ~~~dg--~i~iwd~~~~~~~ 330 (583)
|+.++ .+..||..+.+-.
T Consensus 519 Gg~~~~~~~e~yd~~~~~W~ 538 (557)
T PHA02713 519 HCYESYMLQDTFNVYTYEWN 538 (557)
T ss_pred eeecceeehhhcCccccccc
Confidence 98888 6778888776643
|
|
| >KOG4499|consensus | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.037 Score=46.16 Aligned_cols=134 Identities=13% Similarity=0.072 Sum_probs=84.7
Q ss_pred CCceEEEEccCCcEEEEEec----------CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEE-EEeecCC
Q psy14906 413 SKPTCVYITHCGNFVLIGYS----------SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIV-ISGGNDQ 481 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~~~dg 481 (583)
.+...-..+|+|++ +.|.. .|.++.|-.. ..+..+ ...-.--+.++|+.+.+.+ ++-+.+-
T Consensus 109 nR~NDgkvdP~Gry-y~GtMad~~~~le~~~g~Ly~~~~~--h~v~~i-----~~~v~IsNgl~Wd~d~K~fY~iDsln~ 180 (310)
T KOG4499|consen 109 NRLNDGKVDPDGRY-YGGTMADFGDDLEPIGGELYSWLAG--HQVELI-----WNCVGISNGLAWDSDAKKFYYIDSLNY 180 (310)
T ss_pred cccccCccCCCCce-eeeeeccccccccccccEEEEeccC--CCceee-----ehhccCCccccccccCcEEEEEccCce
Confidence 56667778999999 44432 1334444321 111111 1122233578888777655 4455677
Q ss_pred cEEEEE--ccCCCC---CceEEeecc-----CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEE
Q psy14906 482 TVKVWH--FKQTGK---PPLRSIKLD-----NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDAD 551 (583)
Q Consensus 482 ~i~iwd--~~~~~~---~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~ 551 (583)
+|.-|| ..++.. +.+..++.. -..-.+++..+|.+.++....++|...|..+|+.+.+++-....|++++
T Consensus 181 ~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitscc 260 (310)
T KOG4499|consen 181 EVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCC 260 (310)
T ss_pred EEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEE
Confidence 787788 444311 222222221 1234456677888888889999999999999999999998899999999
Q ss_pred ecC
Q psy14906 552 FSP 554 (583)
Q Consensus 552 ~s~ 554 (583)
|--
T Consensus 261 FgG 263 (310)
T KOG4499|consen 261 FGG 263 (310)
T ss_pred ecC
Confidence 964
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0042 Score=57.96 Aligned_cols=137 Identities=16% Similarity=0.190 Sum_probs=94.5
Q ss_pred EEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcE-------EEEeecCCcEEEEEccCCCCCceEEee-
Q psy14906 429 IGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQI-------VISGGNDQTVKVWHFKQTGKPPLRSIK- 500 (583)
Q Consensus 429 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-------l~s~~~dg~i~iwd~~~~~~~~~~~~~- 500 (583)
.+.....++-.|++.|+.+..+ .-|.. |+-+.+.|+.+. -+.|-.|..|.-||.+-.....+...+
T Consensus 351 ~~~~~~~l~klDIE~GKIVeEW-----k~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~ 424 (644)
T KOG2395|consen 351 DGGEQDKLYKLDIERGKIVEEW-----KFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQS 424 (644)
T ss_pred CCCCcCcceeeecccceeeeEe-----eccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeec
Confidence 3444566899999999999888 34443 777777776531 233556788999998765432232222
Q ss_pred ----ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 501 ----LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 501 ----~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
......|.+-..+| ++|+|+.+|.|++||--..+.-..+++-..+|..+..+.||++|+..+ +..+.+-++
T Consensus 425 kqy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t 499 (644)
T KOG2395|consen 425 KQYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDT 499 (644)
T ss_pred cccccccccceeeecCCc-eEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEE
Confidence 22355666655544 889999999999999833333345778889999999999999988655 556666554
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00073 Score=55.76 Aligned_cols=140 Identities=14% Similarity=0.093 Sum_probs=83.9
Q ss_pred eEEEEEcCCeEEEEecccee--eeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCC-cEEEEeeccCCceEEeccc
Q psy14906 84 FHIYTSANNIIYAWRRGIDI--VGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAE-ETYLELSFDNDTFKIMGKR 160 (583)
Q Consensus 84 ~~~~~~~~~~i~vw~~~~~~--~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~ 160 (583)
.+.+.+.++.|+-+++.... .+.-.-|... ..+---+..|+.|+.+|.|.+|++... ....... .
T Consensus 32 ~l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~-~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~-----------s 99 (238)
T KOG2444|consen 32 LLRATSADGLVRERKVRKHKESCRSERFIDEG-QRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVC-----------S 99 (238)
T ss_pred hhccccCCcccccchhhhhhhhhhhhhhhhcc-eeecccCceEEeecccceEEEecCCccchHHHhhh-----------c
Confidence 46677888888888864321 1111112221 223334567889999999999998732 2111111 1
Q ss_pred CCcceEEE-eeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccC-CCeEEEEEecCCCCEEEEE--cCCCcEEEEeCCC
Q psy14906 161 WNSCVNVL-EPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTW-GPVTALSFRTDGPPMMVSG--SNTGHLTVWNLED 236 (583)
Q Consensus 161 ~~~~i~~~-~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~--~~dg~i~vwd~~~ 236 (583)
....|.++ .-..++.+..++..+|.|+.|+++.++.+.....|. .++.....+..++ +++.+ +.|..++.|++..
T Consensus 100 ~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~-~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 100 GEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDE-FLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCc-eEEeeccccchhhhhcchhh
Confidence 12333333 223456688899999999999999888888777776 4444444444444 45555 5566666666553
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.079 Score=46.13 Aligned_cols=166 Identities=8% Similarity=0.071 Sum_probs=113.6
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEecc-CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQT-WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
+....+.++.|+|+.+.|.+......-.|+=-.+|+.+.++.-. -.....+.+..+++ ++++--.++.+.++.+....
T Consensus 83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~-fvi~dER~~~l~~~~vd~~t 161 (316)
T COG3204 83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQ-FVIVDERDRALYLFTVDADT 161 (316)
T ss_pred cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCE-EEEEehhcceEEEEEEcCCc
Confidence 34455999999999999988877777777776789999887622 24567788888887 77777778888888776542
Q ss_pred ehhhhh--------hcc-ccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC-------CCCCeeEEE
Q psy14906 239 VENQIK--------KAH-RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH-------SAPPNYIQF 302 (583)
Q Consensus 239 ~~~~~~--------~~~-~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~-------~~~v~~~~~ 302 (583)
.+.... ..+ ....-.++|.|....|+.+-+-.-+.|+.++.... .-.......+ -..+.++.|
T Consensus 162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~-~l~~~~~~~~~~~~~~f~~DvSgl~~ 240 (316)
T COG3204 162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPS-SLSVHASLDPTADRDLFVLDVSGLEF 240 (316)
T ss_pred cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCc-ccccccccCcccccceEeecccccee
Confidence 211110 112 56778899999999888888888888886653221 1111111111 235778888
Q ss_pred eeCCCCEEEEeeCCCcEEEEEcccc
Q psy14906 303 YGNSSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 303 ~~~~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
.+..+..|+-+.+++.+.-.|....
T Consensus 241 ~~~~~~LLVLS~ESr~l~Evd~~G~ 265 (316)
T COG3204 241 NAITNSLLVLSDESRRLLEVDLSGE 265 (316)
T ss_pred cCCCCcEEEEecCCceEEEEecCCC
Confidence 8777778888888888777776543
|
|
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.14 Score=46.14 Aligned_cols=156 Identities=13% Similarity=0.079 Sum_probs=78.2
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC-CCCe
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDRQ 238 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~-~~~~ 238 (583)
...+.+..+.-++||++++++..-....-||.-...-...-+.-...|.+|.|.|++. +.+ ....|.|+.=+. ...+
T Consensus 142 ~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~-lw~-~~~Gg~~~~s~~~~~~~ 219 (302)
T PF14870_consen 142 ETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGN-LWM-LARGGQIQFSDDPDDGE 219 (302)
T ss_dssp S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS--EEE-EETTTEEEEEE-TTEEE
T ss_pred CCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCC-EEE-EeCCcEEEEccCCCCcc
Confidence 4467888999999999999886655555677532112222223457999999999987 444 447788888772 2222
Q ss_pred ehhh--hh-hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC
Q psy14906 239 VENQ--IK-KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 239 ~~~~--~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 315 (583)
.-.. .. ..-.-.+..++|.+++...++|+ .|.+..= .|. ..+.+.......-...++.+.|.+ .+.-+..+.
T Consensus 220 ~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg-~G~l~~S-~Dg-GktW~~~~~~~~~~~n~~~i~f~~--~~~gf~lG~ 294 (302)
T PF14870_consen 220 TWSEPIIPIKTNGYGILDLAYRPPNEIWAVGG-SGTLLVS-TDG-GKTWQKDRVGENVPSNLYRIVFVN--PDKGFVLGQ 294 (302)
T ss_dssp EE---B-TTSS--S-EEEEEESSSS-EEEEES-TT-EEEE-SST-TSS-EE-GGGTTSSS---EEEEEE--TTEEEEE-S
T ss_pred ccccccCCcccCceeeEEEEecCCCCEEEEeC-CccEEEe-CCC-CccceECccccCCCCceEEEEEcC--CCceEEECC
Confidence 2111 10 12233588999999888777666 4533322 221 112222222223355688999984 356666677
Q ss_pred CCcEEEE
Q psy14906 316 DSTLRIF 322 (583)
Q Consensus 316 dg~i~iw 322 (583)
+|.+.-|
T Consensus 295 ~G~ll~~ 301 (302)
T PF14870_consen 295 DGVLLRY 301 (302)
T ss_dssp TTEEEEE
T ss_pred CcEEEEe
Confidence 8887665
|
|
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0082 Score=56.09 Aligned_cols=139 Identities=14% Similarity=0.173 Sum_probs=98.9
Q ss_pred EEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCC-------EEEEEecCCeEEEEEccCC-c
Q psy14906 124 LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD-------IIGVGLSNKKIILHNILTD-E 195 (583)
Q Consensus 124 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-------~l~~~~~d~~i~iw~~~~~-~ 195 (583)
|.++.....|+-.|++.|+.+.+..+ +.. |.-+.+.|+.+ .-++|-.+..|+-||.+-. .
T Consensus 349 l~~~~~~~~l~klDIE~GKIVeEWk~-----------~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~ 416 (644)
T KOG2395|consen 349 LMDGGEQDKLYKLDIERGKIVEEWKF-----------EDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGK 416 (644)
T ss_pred eeCCCCcCcceeeecccceeeeEeec-----------cCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCc
Confidence 33455567789999999999999874 233 77777777653 2235777888999998732 2
Q ss_pred -eeEEEecc----CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCC
Q psy14906 196 -SLMEFIQT----WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN 270 (583)
Q Consensus 196 -~~~~~~~~----~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 270 (583)
.+..-.+| .....|.+-..+| ++++|+.+|.|++||- .+...++...+...+|..+..+.+|++|+..+ +.
T Consensus 417 ~kl~~~q~kqy~~k~nFsc~aTT~sG--~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~t 492 (644)
T KOG2395|consen 417 NKLAVVQSKQYSTKNNFSCFATTESG--YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC-KT 492 (644)
T ss_pred ceeeeeeccccccccccceeeecCCc--eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec-cc
Confidence 22222222 2455677767777 6999999999999998 56666665578899999999999999887665 55
Q ss_pred eEEEEEcc
Q psy14906 271 TLKLWIFD 278 (583)
Q Consensus 271 ~i~~w~~~ 278 (583)
.+.+-+..
T Consensus 493 yLlLi~t~ 500 (644)
T KOG2395|consen 493 YLLLIDTL 500 (644)
T ss_pred EEEEEEEe
Confidence 66666543
|
|
| >COG3204 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.041 Score=47.80 Aligned_cols=161 Identities=10% Similarity=0.087 Sum_probs=112.9
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCC
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG 492 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 492 (583)
..+.++.|+|+.+.|++..+...-.++=...|+.+..++.. + -.....|.+..++++.++--.++.+.++.+....
T Consensus 86 ~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~---g-~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t 161 (316)
T COG3204 86 ANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLT---G-FSDPETIEYIGGNQFVIVDERDRALYLFTVDADT 161 (316)
T ss_pred ccccceeeCCCcceEEEecCCCceEEEEecCCceEEEeccc---c-cCChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence 45999999999999999888887777777788888887643 2 3345678888889888888888999988877652
Q ss_pred CCceE-----Ee-----ec-cCCeeeEEeccCCcEEEEEeCCceEEEEEccccce-E--Eeecccc-------cceeeEE
Q psy14906 493 KPPLR-----SI-----KL-DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI-I--RKLSGHM-------GQLTDAD 551 (583)
Q Consensus 493 ~~~~~-----~~-----~~-~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-~--~~~~~h~-------~~v~~l~ 551 (583)
... .+ .. ......++|.|..+.|.++-+..-+.||.+..... + .....+. ..|.++.
T Consensus 162 --~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~ 239 (316)
T COG3204 162 --TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLE 239 (316)
T ss_pred --cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccce
Confidence 111 11 11 34678899999999999998888888887764331 1 1111121 3467778
Q ss_pred ecC-CCcEEEEEeCCCeEEEEeCCCccccc
Q psy14906 552 FSP-DSRWLITASMDCTIRVWDIPSSQLID 580 (583)
Q Consensus 552 ~s~-d~~~l~s~~~d~~i~vw~~~~~~~~~ 580 (583)
|.+ .+..|+-+.+++.+.--|.. |+.+.
T Consensus 240 ~~~~~~~LLVLS~ESr~l~Evd~~-G~~~~ 268 (316)
T COG3204 240 FNAITNSLLVLSDESRRLLEVDLS-GEVIE 268 (316)
T ss_pred ecCCCCcEEEEecCCceEEEEecC-CCeee
Confidence 876 45666777777777777753 55443
|
|
| >PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2 | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.091 Score=45.68 Aligned_cols=159 Identities=9% Similarity=0.022 Sum_probs=104.6
Q ss_pred CCceEEEEccCCcEEEEEecCc--eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccC
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSG--HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQ 490 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 490 (583)
.-...+.|..+|.++-+.+.-| .|+.+|+.+++.......+ ..---..++... ++...-.=.++...+||..+
T Consensus 45 aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~----~~~FgEGit~~~-d~l~qLTWk~~~~f~yd~~t 119 (264)
T PF05096_consen 45 AFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLP----PRYFGEGITILG-DKLYQLTWKEGTGFVYDPNT 119 (264)
T ss_dssp -EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-T----TT--EEEEEEET-TEEEEEESSSSEEEEEETTT
T ss_pred ccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECC----ccccceeEEEEC-CEEEEEEecCCeEEEEcccc
Confidence 4456778877888777776655 7999999999877655322 122233444443 33333444678999999998
Q ss_pred CCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccc-----cceeeEEecCCCcEEEEEeCC
Q psy14906 491 TGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM-----GQLTDADFSPDSRWLITASMD 565 (583)
Q Consensus 491 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~-----~~v~~l~~s~d~~~l~s~~~d 565 (583)
. +.+..+.....-..++ .|++.|+.......++++|.++.+....+.-.. ..++.|.|- +|...|=.=..
T Consensus 120 l--~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~t 194 (264)
T PF05096_consen 120 L--KKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQT 194 (264)
T ss_dssp T--EEEEEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTS
T ss_pred c--eEEEEEecCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCC
Confidence 7 8888888777666666 678888888888899999998887776655322 346667775 77777766666
Q ss_pred CeEEEEeCCCcccccc
Q psy14906 566 CTIRVWDIPSSQLIDC 581 (583)
Q Consensus 566 ~~i~vw~~~~~~~~~~ 581 (583)
..|..-|..+|+.+..
T Consensus 195 d~I~~Idp~tG~V~~~ 210 (264)
T PF05096_consen 195 DRIVRIDPETGKVVGW 210 (264)
T ss_dssp SEEEEEETTT-BEEEE
T ss_pred CeEEEEeCCCCeEEEE
Confidence 7788889999887764
|
3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X. |
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.21 Score=46.53 Aligned_cols=75 Identities=15% Similarity=0.150 Sum_probs=46.9
Q ss_pred ceEEeeccCCeeeEEecc-------CCcEEEEEeCCceEEEEEccccceEE----eecccccceeeEEecCCCcEEEEEe
Q psy14906 495 PLRSIKLDNGISFFRTHQ-------ESSMLAVCLDDFTVNIIDIDTCTIIR----KLSGHMGQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 495 ~~~~~~~~~~v~~~~~s~-------~~~~l~~~~~dg~i~i~d~~~~~~~~----~~~~h~~~v~~l~~s~d~~~l~s~~ 563 (583)
+...+..+..+..+.|-. .|.++++.-..+.|....++.+..+. .+.....++..+++.|||.+.++.+
T Consensus 245 P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d 324 (331)
T PF07995_consen 245 PVFAYPPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDD 324 (331)
T ss_dssp -SEEETTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-
T ss_pred cceeecCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEEC
Confidence 444555556666776653 45566666667788888887553321 1234445899999999999988888
Q ss_pred CCCeEE
Q psy14906 564 MDCTIR 569 (583)
Q Consensus 564 ~d~~i~ 569 (583)
.+|.|.
T Consensus 325 ~~G~iy 330 (331)
T PF07995_consen 325 SDGKIY 330 (331)
T ss_dssp TTTTEE
T ss_pred CCCeEe
Confidence 888764
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.046 Score=54.89 Aligned_cols=104 Identities=9% Similarity=0.059 Sum_probs=53.7
Q ss_pred eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCC------cEEEEEccC-CCCCceEEeeccCCeee
Q psy14906 435 HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ------TVKVWHFKQ-TGKPPLRSIKLDNGISF 507 (583)
Q Consensus 435 ~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg------~i~iwd~~~-~~~~~~~~~~~~~~v~~ 507 (583)
.+..||..+.+-...-+. .......-+..-++++.+.|+.++ .+..||..+ ..-..+..+........
T Consensus 433 ~ve~YDP~td~W~~v~~m-----~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~ 507 (557)
T PHA02713 433 KVIRYDTVNNIWETLPNF-----WTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALH 507 (557)
T ss_pred eEEEECCCCCeEeecCCC-----CcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccce
Confidence 477788776654322211 111111112223567777776542 367788886 42222232222211122
Q ss_pred EEeccCCcEEEEEeCCc--eEEEEEccccceEEeecccc
Q psy14906 508 FRTHQESSMLAVCLDDF--TVNIIDIDTCTIIRKLSGHM 544 (583)
Q Consensus 508 ~~~s~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~h~ 544 (583)
++ .-+|++.++|+.++ .+..||..+.+-......|.
T Consensus 508 ~~-~~~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~~~ 545 (557)
T PHA02713 508 TI-LHDNTIMMLHCYESYMLQDTFNVYTYEWNHICHQHS 545 (557)
T ss_pred eE-EECCEEEEEeeecceeehhhcCcccccccchhhhcC
Confidence 22 22788889999888 77788887765443333343
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0025 Score=38.58 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=31.6
Q ss_pred eeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccce
Q psy14906 499 IKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI 536 (583)
Q Consensus 499 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 536 (583)
......|.+++|+|...++|.++.+|.|.+|.+ +++.
T Consensus 8 k~l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 8 KNLPSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred cCCCCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 344567999999999999999999999999998 4543
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0029 Score=38.31 Aligned_cols=35 Identities=14% Similarity=0.236 Sum_probs=30.8
Q ss_pred ccceeeEEecCCCcEEEEEeCCCeEEEEeCCCcccc
Q psy14906 544 MGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579 (583)
Q Consensus 544 ~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~ 579 (583)
...|..++|+|...+||.++.||.|.++.+ +++.+
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qri 45 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQRI 45 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcCc
Confidence 456999999999999999999999999999 56543
|
|
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.15 Score=51.13 Aligned_cols=147 Identities=12% Similarity=0.083 Sum_probs=83.4
Q ss_pred CCcEEEEEecCce-----EEEEEcccCccccccCCCCCCCcccCeeEEE-EeCCCcEEEEeecCC------cEEEEEccC
Q psy14906 423 CGNFVLIGYSSGH-----VDRFNIQSGAHRGSYGHDNQPGHVGGVRGVV-SDNLNQIVISGGNDQ------TVKVWHFKQ 490 (583)
Q Consensus 423 ~~~~l~~~~~dg~-----i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~-~s~~~~~l~s~~~dg------~i~iwd~~~ 490 (583)
+|...++|+.||. +..||..+.+....-+ ......+.+ ..-+|++.+.||.++ ++..||..+
T Consensus 380 ~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~------m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t 453 (571)
T KOG4441|consen 380 DGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAP------MLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPET 453 (571)
T ss_pred CCEEEEEeccccccccccEEEecCCCCcccccCC------CCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCC
Confidence 5777888888764 7778877665443321 111222222 223678888888554 467788877
Q ss_pred CCCCceEEeeccCCeeeEEeccCCcEEEEEeCCc-----eEEEEEccccceEE--eecccccceeeEEecCCCcEEEEEe
Q psy14906 491 TGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDF-----TVNIIDIDTCTIIR--KLSGHMGQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 491 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~~~~~~--~~~~h~~~v~~l~~s~d~~~l~s~~ 563 (583)
+.-..+..+.....-..++ .-++.+.++|+.|+ +|..||..+.+-.. ........+....+ ++...+.|+
T Consensus 454 ~~W~~~~~M~~~R~~~g~a-~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~--~~~ly~vGG 530 (571)
T KOG4441|consen 454 NTWTLIAPMNTRRSGFGVA-VLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVL--GGKLYAVGG 530 (571)
T ss_pred CceeecCCcccccccceEE-EECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEEE--CCEEEEEec
Confidence 6333333322222112222 23678888888776 47788887655332 22223333333333 567778888
Q ss_pred CCC-----eEEEEeCCCccc
Q psy14906 564 MDC-----TIRVWDIPSSQL 578 (583)
Q Consensus 564 ~d~-----~i~vw~~~~~~~ 578 (583)
.|+ +|..||..+.+.
T Consensus 531 ~~~~~~l~~ve~ydp~~d~W 550 (571)
T KOG4441|consen 531 FDGNNNLNTVECYDPETDTW 550 (571)
T ss_pred ccCccccceeEEcCCCCCce
Confidence 876 577888777654
|
|
| >TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.27 Score=50.88 Aligned_cols=158 Identities=14% Similarity=0.165 Sum_probs=93.9
Q ss_pred CCcEEEEEecCceEEEEEcccCccccccCCCCC---C----CcccCeeEEEEeC--CCcEEEEeec----------CCcE
Q psy14906 423 CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQ---P----GHVGGVRGVVSDN--LNQIVISGGN----------DQTV 483 (583)
Q Consensus 423 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~----~h~~~v~~~~~s~--~~~~l~s~~~----------dg~i 483 (583)
++..++.++.|+.+.-.|..+|+....+..... . .....-..+.-.| .+..++.++. +|.|
T Consensus 259 ~~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I 338 (764)
T TIGR03074 259 CARRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVI 338 (764)
T ss_pred cCCEEEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEE
Confidence 456888899999999999999998876521100 0 0000000111112 1234454532 6889
Q ss_pred EEEEccCCCCCceEEeeccC------------------Ce-eeEEeccCCcEEEEEe------------------CCceE
Q psy14906 484 KVWHFKQTGKPPLRSIKLDN------------------GI-SFFRTHQESSMLAVCL------------------DDFTV 526 (583)
Q Consensus 484 ~iwd~~~~~~~~~~~~~~~~------------------~v-~~~~~s~~~~~l~~~~------------------~dg~i 526 (583)
+-+|.+++ +++..+.... .+ ...++.++..+++.+. ..++|
T Consensus 339 ~A~Da~TG--kl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~sl 416 (764)
T TIGR03074 339 RAFDVNTG--ALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSL 416 (764)
T ss_pred EEEECCCC--cEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceE
Confidence 99999999 7776654211 01 2234445444444422 13567
Q ss_pred EEEEccccceEEeecccccceee---------EEecC-CCc---EEEEEeCCCeEEEEeCCCccccccc
Q psy14906 527 NIIDIDTCTIIRKLSGHMGQLTD---------ADFSP-DSR---WLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 527 ~i~d~~~~~~~~~~~~h~~~v~~---------l~~s~-d~~---~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
.-.|.++|+....++.....+.+ +.+.. +|+ .++.++.+|.+++.|-++|+++-..
T Consensus 417 vALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~ 485 (764)
T TIGR03074 417 VALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV 485 (764)
T ss_pred EEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence 77888999988766542111111 22322 563 7889999999999999999987643
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. |
| >PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.29 Score=44.25 Aligned_cols=176 Identities=12% Similarity=0.081 Sum_probs=86.7
Q ss_pred eEEEEEcCCeEEEEecccee-eeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEeccc
Q psy14906 84 FHIYTSANNIIYAWRRGIDI-VGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKR 160 (583)
Q Consensus 84 ~~~~~~~~~~i~vw~~~~~~-~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 160 (583)
...+++..|.|..=.-.++. .....+-.+.+..+ ++||++++++.......-||-....-...-. .
T Consensus 116 ~~~l~~~~G~iy~T~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r-----------~ 184 (302)
T PF14870_consen 116 SAELAGDRGAIYRTTDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNR-----------N 184 (302)
T ss_dssp EEEEEETT--EEEESSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE-------------
T ss_pred cEEEEcCCCcEEEeCCCCCCeeEcccCCcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEcc-----------C
Confidence 44445555554433323322 22233445666665 8999999998766666788754321111111 4
Q ss_pred CCcceEEEeeCCCCCEEEEEecCCeEEEEEc-cCCceeEE----EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q psy14906 161 WNSCVNVLEPSPVVDIIGVGLSNKKIILHNI-LTDESLME----FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 161 ~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~-~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 235 (583)
....|..|.|+|++.+.+.+ ..|.|+.=+. ...+.-.. +....-.+..++|.+++. +.++|+ .|.+. ...+
T Consensus 185 ~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~-~wa~gg-~G~l~-~S~D 260 (302)
T PF14870_consen 185 SSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNE-IWAVGG-SGTLL-VSTD 260 (302)
T ss_dssp SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS--EEEEES-TT-EE-EESS
T ss_pred ccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCC-EEEEeC-CccEE-EeCC
Confidence 47899999999998877755 7788887762 22222111 111223478999999987 666665 45443 3455
Q ss_pred CCeehhhhh--hccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy14906 236 DRQVENQIK--KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275 (583)
Q Consensus 236 ~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w 275 (583)
.|+--+... ..-...+..+.|.++.+-++.| .+|.+.-|
T Consensus 261 gGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG-~~G~ll~~ 301 (302)
T PF14870_consen 261 GGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLG-QDGVLLRY 301 (302)
T ss_dssp TTSS-EE-GGGTTSSS---EEEEEETTEEEEE--STTEEEEE
T ss_pred CCccceECccccCCCCceEEEEEcCCCceEEEC-CCcEEEEe
Confidence 554322221 2335568889998776555554 68877655
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.079 Score=47.01 Aligned_cols=144 Identities=13% Similarity=0.036 Sum_probs=89.7
Q ss_pred CceEEEEccCCcEEEEEe---cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE-cc
Q psy14906 414 KPTCVYITHCGNFVLIGY---SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH-FK 489 (583)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd-~~ 489 (583)
.+.+.+++++++.+++-. ....++++. .+...... .....+....|++++...+....+...+++. ..
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~--~~~~~~~~------~~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~ 96 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGP--AGGPVRPV------LTGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSA 96 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEc--CCCcceee------ccCCccccccccCCCCEEEEEcCCCceEEEEecC
Confidence 688999999998776655 333455544 33333322 1223788889999987777666666667664 22
Q ss_pred CCCCCceEEeecc---CCeeeEEeccCCcEEEEEe---CCceEEEEEcc---cc------ceEEeecccccceeeEEecC
Q psy14906 490 QTGKPPLRSIKLD---NGISFFRTHQESSMLAVCL---DDFTVNIIDID---TC------TIIRKLSGHMGQLTDADFSP 554 (583)
Q Consensus 490 ~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~---~dg~i~i~d~~---~~------~~~~~~~~h~~~v~~l~~s~ 554 (583)
.+. ......... ..|..+.+||||..+|... .++.|.+--+. .+ ..+.........+++++|.+
T Consensus 97 ~g~-~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~ 175 (253)
T PF10647_consen 97 SGT-GEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSD 175 (253)
T ss_pred CCc-ceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecC
Confidence 221 111122211 2899999999999888765 35777777653 23 11122223346799999999
Q ss_pred CCcEEEEEeCCC
Q psy14906 555 DSRWLITASMDC 566 (583)
Q Consensus 555 d~~~l~s~~~d~ 566 (583)
++.+++.+...+
T Consensus 176 ~~~L~V~~~~~~ 187 (253)
T PF10647_consen 176 DSTLVVLGRSAG 187 (253)
T ss_pred CCEEEEEeCCCC
Confidence 998877655443
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >KOG4441|consensus | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.14 Score=51.36 Aligned_cols=149 Identities=10% Similarity=0.024 Sum_probs=78.2
Q ss_pred CCCCCEEEEEecC------CeEEEEEccCCceeEEEec-cCCCeEEEEEecCCCCEEEEEcCC------CcEEEEeCCCC
Q psy14906 171 SPVVDIIGVGLSN------KKIILHNILTDESLMEFIQ-TWGPVTALSFRTDGPPMMVSGSNT------GHLTVWNLEDR 237 (583)
Q Consensus 171 s~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~d------g~i~vwd~~~~ 237 (583)
+..+.++++|+.+ ..+..||..+++......- ....-.+++...+ . +.++|+.| .++..||...+
T Consensus 282 ~~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~-~-lYv~GG~~~~~~~l~~ve~YD~~~~ 359 (571)
T KOG4441|consen 282 SVSGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNG-K-LYVVGGYDSGSDRLSSVERYDPRTN 359 (571)
T ss_pred CCCCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECC-E-EEEEccccCCCcccceEEEecCCCC
Confidence 3345677777766 3678899887744332221 1123444555443 4 88889888 34778888876
Q ss_pred eehhhhhhccccceEEEEEecCCCEEEEEeCCCe-----EEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEE
Q psy14906 238 QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT-----LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILS 312 (583)
Q Consensus 238 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~-----i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 312 (583)
+-...- .-.......-.-.-+|...+.||.||. +..| |..+........+.. .........-++...++
T Consensus 360 ~W~~~a-~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~Y--Dp~~~~W~~va~m~~---~r~~~gv~~~~g~iYi~ 433 (571)
T KOG4441|consen 360 QWTPVA-PMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECY--DPVTNKWTPVAPMLT---RRSGHGVAVLGGKLYII 433 (571)
T ss_pred ceeccC-CccCccccceeEEECCEEEEEeccccccccccEEEe--cCCCCcccccCCCCc---ceeeeEEEEECCEEEEE
Confidence 533211 111111111111236888889998864 5556 433334444433322 22222222236777778
Q ss_pred eeCCCc------EEEEEcccc
Q psy14906 313 AAGDST------LRIFNTKSE 327 (583)
Q Consensus 313 ~~~dg~------i~iwd~~~~ 327 (583)
|+.++. +..||..++
T Consensus 434 GG~~~~~~~l~sve~YDP~t~ 454 (571)
T KOG4441|consen 434 GGGDGSSNCLNSVECYDPETN 454 (571)
T ss_pred cCcCCCccccceEEEEcCCCC
Confidence 876543 445555444
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.19 Score=46.81 Aligned_cols=207 Identities=15% Similarity=0.084 Sum_probs=95.3
Q ss_pred CCCEEEEEe-CCCcEEEEEcCC----CcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC------CeEEE
Q psy14906 120 FGPHLISVD-EESNVKVWDIKA----EETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN------KKIIL 188 (583)
Q Consensus 120 ~~~~l~s~~-~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------~~i~i 188 (583)
+.++|+..+ ..+.|.|.|+.+ .+..+.++-..- .. +..-..-..+.--|+|+.++++-.| |.+.+
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev-~~---k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~l 161 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEV-FE---KTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVL 161 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHH-HH---HH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEE
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHH-Hh---hcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEE
Confidence 456788766 568999999985 234444431000 00 0001222233345789888886432 57889
Q ss_pred EEccCCceeEEEeccC---CCeEEEEEecCCCCEEEEEc--------------------CCCcEEEEeCCCCeehhhhhh
Q psy14906 189 HNILTDESLMEFIQTW---GPVTALSFRTDGPPMMVSGS--------------------NTGHLTVWNLEDRQVENQIKK 245 (583)
Q Consensus 189 w~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l~s~~--------------------~dg~i~vwd~~~~~~~~~~~~ 245 (583)
+|-++.+......... .--+.+-|.|..+ .++|.. ...++.+||+.+.+.++++..
T Consensus 162 lD~~tf~v~g~We~~~~~~~~gYDfw~qpr~n-vMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idL 240 (461)
T PF05694_consen 162 LDGETFEVKGRWEKDRGPQPFGYDFWYQPRHN-VMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDL 240 (461)
T ss_dssp E-TTT--EEEE--SB-TT------EEEETTTT-EEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES
T ss_pred EcCccccccceeccCCCCCCCCCCeEEcCCCC-EEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEec
Confidence 9988888877766432 2345667788766 777653 235799999999999998854
Q ss_pred cccc-ceEEEEEecC--CCEE-EEEeCCCeEEEEEccCCCCCceeeEE--ecc-----------------CCCCCeeEEE
Q psy14906 246 AHRK-VVTGAHFLYN--EPLL-VTSSPDNTLKLWIFDKADGNGRLLRI--REG-----------------HSAPPNYIQF 302 (583)
Q Consensus 246 ~~~~-~v~~~~~~~~--~~~l-~s~~~d~~i~~w~~~~~~~~~~~~~~--~~~-----------------~~~~v~~~~~ 302 (583)
+..+ ....+.|..+ ..+= +.+-...+|-.|--+ ..+.....+. +.. -..-|+.+..
T Consensus 241 g~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~-~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~i 319 (461)
T PF05694_consen 241 GEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKD-DDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILI 319 (461)
T ss_dssp -TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE--ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE
T ss_pred CCCCCceEEEEecCCCCccceEEEEeccceEEEEEEc-CCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEE
Confidence 4433 4557777644 4443 333334444433211 1222221111 111 1345788889
Q ss_pred eeCCCCEEEEee-CCCcEEEEEccccccceee
Q psy14906 303 YGNSSDNILSAA-GDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 303 ~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~ 333 (583)
|. |.++|+..+ ..|.++.||+......+..
T Consensus 320 Sl-DDrfLYvs~W~~GdvrqYDISDP~~Pkl~ 350 (461)
T PF05694_consen 320 SL-DDRFLYVSNWLHGDVRQYDISDPFNPKLV 350 (461)
T ss_dssp -T-TS-EEEEEETTTTEEEEEE-SSTTS-EEE
T ss_pred cc-CCCEEEEEcccCCcEEEEecCCCCCCcEE
Confidence 86 677776655 5899999999876654443
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.059 Score=55.27 Aligned_cols=109 Identities=8% Similarity=0.043 Sum_probs=74.0
Q ss_pred CCeEEEEe-eCeEEEEEcCCeEEEEeccceee--eeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEee
Q psy14906 74 DDITCLSS-DFFHIYTSANNIIYAWRRGIDIV--GTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELS 148 (583)
Q Consensus 74 ~~v~~~~~-~~~~~~~~~~~~i~vw~~~~~~~--~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 148 (583)
..+.+.+. ..-++++++.|.+...|..+... ..-+.-.++|+++ +.+|..++.|-.+|.|.+||...+..++.+.
T Consensus 90 ~~v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~ 169 (1206)
T KOG2079|consen 90 AGVISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVIT 169 (1206)
T ss_pred cceeeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeee
Confidence 33444454 33566666778999999776533 2223446788886 8999999999999999999999999888887
Q ss_pred ccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEcc
Q psy14906 149 FDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNIL 192 (583)
Q Consensus 149 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~ 192 (583)
... .....|..+.+..++..+.++...|. +|.+.
T Consensus 170 e~~--------ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~lv 203 (1206)
T KOG2079|consen 170 EHG--------APVTGVIFVGRTSQNSKLLTSDTGGS--FWKLV 203 (1206)
T ss_pred ecC--------CccceEEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence 331 11233444444556667777777775 56543
|
|
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=1.1 Score=46.50 Aligned_cols=117 Identities=8% Similarity=0.030 Sum_probs=61.2
Q ss_pred CCeEEEEEecCCCCEEEEEcCCC----cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC-C---eEEEEE
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTG----HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD-N---TLKLWI 276 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-~---~i~~w~ 276 (583)
-.+..+.++||+++++++.+.+| .|++.|+.+++.+..... .. -..++|.+|++.|+....+ + .-.+|.
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~-~~--~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~ 203 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLD-NV--EPSFVWANDSWTFYYVRKHPVTLLPYQVWR 203 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCcccc-Cc--ceEEEEeeCCCEEEEEEecCCCCCCCEEEE
Confidence 45667889999995444444444 488999988864433311 11 1469999999876665443 1 123443
Q ss_pred ccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC---CCcEEEEEc
Q psy14906 277 FDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG---DSTLRIFNT 324 (583)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~iwd~ 324 (583)
.+..+........+........-..+.+.++++++..+. ++.+.+++.
T Consensus 204 h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 204 HTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred EECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 344433112222233222222212233336666554433 345666664
|
|
| >COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.23 Score=40.80 Aligned_cols=183 Identities=11% Similarity=0.060 Sum_probs=107.7
Q ss_pred cccEEEEEeCCCceEEEEe--eCCeEEEEecCCcEEEeecCCCCCCeEE--EEe--eCeEEEEEcCCeEEEEeccc-eee
Q psy14906 32 LPVVARFIRRRKETLFVTC--VGKAFHVYGCNHFKLLSVSPQHEDDITC--LSS--DFFHIYTSANNIIYAWRRGI-DIV 104 (583)
Q Consensus 32 ~~~~~~~~p~~~~~~i~~~--~~~~i~v~d~~~~~~~~~~~~h~~~v~~--~~~--~~~~~~~~~~~~i~vw~~~~-~~~ 104 (583)
..+-+.+ ++...+..++ ....|++||+++++.+..-.-....+.. +.- |-.+..+=.++.-..+|.+. +.+
T Consensus 47 fTQGL~~--~~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~l 124 (262)
T COG3823 47 FTQGLEY--LDGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEEL 124 (262)
T ss_pred hhcceee--eCCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhh
Confidence 3455555 4445555555 5678999999999888643322122211 111 22344455677777777532 333
Q ss_pred eeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCC
Q psy14906 105 GTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNK 184 (583)
Q Consensus 105 ~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~ 184 (583)
..+. -++.=+.+..|++.|+.++...+++.-|.++-....++...-+... -..++.+.|- ||...|-.-.+.
T Consensus 125 g~~~-y~GeGWgLt~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~p------v~~LNELE~V-dG~lyANVw~t~ 196 (262)
T COG3823 125 GRFS-YEGEGWGLTSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVP------VSKLNELEWV-DGELYANVWQTT 196 (262)
T ss_pred cccc-cCCcceeeecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCee------cccccceeee-ccEEEEeeeeec
Confidence 2222 2333455667777788776667788888877655555443221111 1233444444 677777666677
Q ss_pred eEEEEEccCCceeEEEe------------ccCCCeEEEEEecCCCCEEEEEc
Q psy14906 185 KIILHNILTDESLMEFI------------QTWGPVTALSFRTDGPPMMVSGS 224 (583)
Q Consensus 185 ~i~iw~~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~~l~s~~ 224 (583)
.|...+.++|+.+..+. .+..-.+.+++.|++.+++++|-
T Consensus 197 ~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTGK 248 (262)
T COG3823 197 RIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITGK 248 (262)
T ss_pred ceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEecC
Confidence 77778888887766543 23346788999999875777774
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.92 Score=42.32 Aligned_cols=154 Identities=12% Similarity=0.066 Sum_probs=84.7
Q ss_pred CcceEEEeeCCCCCEEEEEecCCeEEE-EEccCCceeEEE-eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLSNKKIIL-HNILTDESLMEF-IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~d~~i~i-w~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
...+..+.+.|++.+++++ ..|.+.. ++ ..++.-... ......++++.+.++++ +++++ ..|.+++=..+.++.
T Consensus 172 ~g~~~~i~~~~~g~~v~~g-~~G~i~~s~~-~gg~tW~~~~~~~~~~l~~i~~~~~g~-~~~vg-~~G~~~~~s~d~G~s 247 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVS-SRGNFYSTWE-PGQTAWTPHQRNSSRRLQSMGFQPDGN-LWMLA-RGGQIRFNDPDDLES 247 (334)
T ss_pred cceEEEEEECCCCeEEEEe-CCceEEEEcC-CCCCeEEEeeCCCcccceeeeEcCCCC-EEEEe-cCCEEEEccCCCCCc
Confidence 5678899999998777665 4454443 22 112222222 23346889999999998 55554 457665323444433
Q ss_pred hhhhhhc---cccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC
Q psy14906 240 ENQIKKA---HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD 316 (583)
Q Consensus 240 ~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 316 (583)
-...... ....+.++.+.+++..+++ +.+|.+.. ..+. ....+.......-....+.+.|. +++..+..+..
T Consensus 248 W~~~~~~~~~~~~~l~~v~~~~~~~~~~~-G~~G~v~~-S~d~-G~tW~~~~~~~~~~~~~~~~~~~--~~~~~~~~G~~ 322 (334)
T PRK13684 248 WSKPIIPEITNGYGYLDLAYRTPGEIWAG-GGNGTLLV-SKDG-GKTWEKDPVGEEVPSNFYKIVFL--DPEKGFVLGQR 322 (334)
T ss_pred cccccCCccccccceeeEEEcCCCCEEEE-cCCCeEEE-eCCC-CCCCeECCcCCCCCcceEEEEEe--CCCceEEECCC
Confidence 2222111 2245788899988775554 45675543 2221 11222222112223356777776 34455666777
Q ss_pred CcEEEEEc
Q psy14906 317 STLRIFNT 324 (583)
Q Consensus 317 g~i~iwd~ 324 (583)
|.|..|+-
T Consensus 323 G~il~~~~ 330 (334)
T PRK13684 323 GVLLRYVG 330 (334)
T ss_pred ceEEEecC
Confidence 88887763
|
|
| >COG4257 Vgb Streptogramin lyase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.72 Score=39.94 Aligned_cols=261 Identities=12% Similarity=0.064 Sum_probs=151.3
Q ss_pred CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCc
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNG 284 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~ 284 (583)
..-..++-.|||. .-+++...+.|--.|..+++....- .+....-..+..-|||..-++-+.. -|-.++.++...
T Consensus 62 ~ap~dvapapdG~-VWft~qg~gaiGhLdP~tGev~~yp-Lg~Ga~Phgiv~gpdg~~Witd~~~---aI~R~dpkt~ev 136 (353)
T COG4257 62 SAPFDVAPAPDGA-VWFTAQGTGAIGHLDPATGEVETYP-LGSGASPHGIVVGPDGSAWITDTGL---AIGRLDPKTLEV 136 (353)
T ss_pred CCccccccCCCCc-eEEecCccccceecCCCCCceEEEe-cCCCCCCceEEECCCCCeeEecCcc---eeEEecCcccce
Confidence 3456677788998 7888888888888888888766544 4556666778888888766553322 333335433222
Q ss_pred eeeEE-eccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccce
Q psy14906 285 RLLRI-REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQ 363 (583)
Q Consensus 285 ~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (583)
+.... .+.-........|.+ .|.+-+++.. |.---.|.
T Consensus 137 t~f~lp~~~a~~nlet~vfD~-~G~lWFt~q~-G~yGrLdP--------------------------------------- 175 (353)
T COG4257 137 TRFPLPLEHADANLETAVFDP-WGNLWFTGQI-GAYGRLDP--------------------------------------- 175 (353)
T ss_pred EEeecccccCCCcccceeeCC-CccEEEeecc-ccceecCc---------------------------------------
Confidence 21111 222234566777775 6666666542 11111111
Q ss_pred eeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEccc
Q psy14906 364 FSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQS 443 (583)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 443 (583)
..+.+++|+.... .....++..|||..-++...+..|...|..+
T Consensus 176 -------------------a~~~i~vfpaPqG-----------------~gpyGi~atpdGsvwyaslagnaiaridp~~ 219 (353)
T COG4257 176 -------------------ARNVISVFPAPQG-----------------GGPYGICATPDGSVWYASLAGNAIARIDPFA 219 (353)
T ss_pred -------------------ccCceeeeccCCC-----------------CCCcceEECCCCcEEEEeccccceEEccccc
Confidence 1123444443321 4567889999999988888888888888877
Q ss_pred CccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc---CCeeeEEeccCCcEEEEE
Q psy14906 444 GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD---NGISFFRTHQESSMLAVC 520 (583)
Q Consensus 444 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~ 520 (583)
+. ...+..+ ......-+.+--+|.++.-++-...+.+..+|.... . -...... ....++.....++.-.+-
T Consensus 220 ~~-aev~p~P--~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~--s-W~eypLPgs~arpys~rVD~~grVW~se 293 (353)
T COG4257 220 GH-AEVVPQP--NALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVT--S-WIEYPLPGSKARPYSMRVDRHGRVWLSE 293 (353)
T ss_pred CC-cceecCC--CcccccccccccCccCcEEEeccCCceeeEeCcccc--c-ceeeeCCCCCCCcceeeeccCCcEEeec
Confidence 63 3333322 333445566677788888888777888888887664 2 2222222 245556665555555554
Q ss_pred eCCceEEEEEccccceEEeecccccceeeEEecC
Q psy14906 521 LDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSP 554 (583)
Q Consensus 521 ~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~ 554 (583)
...|.|.-+|-++.+ +.++...+.....+.+.+
T Consensus 294 a~agai~rfdpeta~-ftv~p~pr~n~gn~ql~g 326 (353)
T COG4257 294 ADAGAIGRFDPETAR-FTVLPIPRPNSGNIQLDG 326 (353)
T ss_pred cccCceeecCcccce-EEEecCCCCCCCceeccC
Confidence 455666666665443 233443333333444443
|
|
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=96.20 E-value=1.3 Score=44.28 Aligned_cols=87 Identities=15% Similarity=0.246 Sum_probs=56.4
Q ss_pred cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhh---hccccceEEEEEec
Q psy14906 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK---KAHRKVVTGAHFLY 258 (583)
Q Consensus 182 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~---~~~~~~v~~~~~~~ 258 (583)
..-.|+|++.. |..+.++.-..+.+-.+.|+.+.. |++-..+|++++|++-. +.+.... ......|..+.+..
T Consensus 62 a~~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~ee--LI~v~k~g~v~Vy~~~g-e~ie~~svg~e~~~~~I~ec~~f~ 137 (829)
T KOG2280|consen 62 ARPYIRIFNIS-GQLLGRILWKHGELIGMGWSDDEE--LICVQKDGTVHVYGLLG-EFIESNSVGFESQMSDIVECRFFH 137 (829)
T ss_pred cceeEEEEecc-ccchHHHHhcCCCeeeecccCCce--EEEEeccceEEEeecch-hhhcccccccccccCceeEEEEec
Confidence 33468999984 777777664446899999999886 77788899999999863 3333211 12233566666666
Q ss_pred CCCEEEEEeCCCeEEE
Q psy14906 259 NEPLLVTSSPDNTLKL 274 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~ 274 (583)
+|-.+.+ .+|.+.+
T Consensus 138 ~GVavlt--~~g~v~~ 151 (829)
T KOG2280|consen 138 NGVAVLT--VSGQVIL 151 (829)
T ss_pred CceEEEe--cCCcEEE
Confidence 6643333 3444443
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.39 Score=48.52 Aligned_cols=190 Identities=8% Similarity=0.004 Sum_probs=90.5
Q ss_pred ccCCCEEEEEeCCC------cEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC-----CeE
Q psy14906 118 LPFGPHLISVDEES------NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN-----KKI 186 (583)
Q Consensus 118 s~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----~~i 186 (583)
..++..++.||.++ .+..+|..+.+-...-... ........+. -+++..+.|+.+ ..+
T Consensus 292 ~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~---------~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~v 360 (534)
T PHA03098 292 VLNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELI---------YPRKNPGVTV--FNNRIYVIGGIYNSISLNTV 360 (534)
T ss_pred EECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCC---------cccccceEEE--ECCEEEEEeCCCCCEecceE
Confidence 45566666665432 5677887776542211110 1111122222 257777777764 357
Q ss_pred EEEEccCCceeEE--EeccCCCeEEEEEecCCCCEEEEEcCC------CcEEEEeCCCCeehh--hhhhccccceEEEEE
Q psy14906 187 ILHNILTDESLME--FIQTWGPVTALSFRTDGPPMMVSGSNT------GHLTVWNLEDRQVEN--QIKKAHRKVVTGAHF 256 (583)
Q Consensus 187 ~iw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~~--~~~~~~~~~v~~~~~ 256 (583)
..||..+++-... +...... .+++ .-++. +.+.|+.+ ..+..||..+++-.. .+..... . .+ +.
T Consensus 361 ~~yd~~~~~W~~~~~lp~~r~~-~~~~-~~~~~-iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~-~-~~-~~ 434 (534)
T PHA03098 361 ESWKPGESKWREEPPLIFPRYN-PCVV-NVNNL-IYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHY-G-GC-AI 434 (534)
T ss_pred EEEcCCCCceeeCCCcCcCCcc-ceEE-EECCE-EEEECCcCCCCcccceEEEEeCCCCeeeecCCCCcccc-C-ce-EE
Confidence 7788776543221 1111111 1122 23455 67777632 358889988764322 1111111 1 11 22
Q ss_pred ecCCCEEEEEeCCC--------eEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC-----CcEEEEE
Q psy14906 257 LYNEPLLVTSSPDN--------TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD-----STLRIFN 323 (583)
Q Consensus 257 ~~~~~~l~s~~~d~--------~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~iwd 323 (583)
..++..++.||.+. .+..| |..+.....+..+...... .+++.. ++..++.|+.+ ..+.+||
T Consensus 435 ~~~~~iyv~GG~~~~~~~~~~~~v~~y--d~~~~~W~~~~~~~~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd 509 (534)
T PHA03098 435 YHDGKIYVIGGISYIDNIKVYNIVESY--NPVTNKWTELSSLNFPRIN-ASLCIF--NNKIYVVGGDKYEYYINEIEVYD 509 (534)
T ss_pred EECCEEEEECCccCCCCCcccceEEEe--cCCCCceeeCCCCCccccc-ceEEEE--CCEEEEEcCCcCCcccceeEEEe
Confidence 33566677776432 25555 5444444443322211111 122222 56677777654 4678888
Q ss_pred cccccc
Q psy14906 324 TKSETS 329 (583)
Q Consensus 324 ~~~~~~ 329 (583)
..+.+-
T Consensus 510 ~~~~~W 515 (534)
T PHA03098 510 DKTNTW 515 (534)
T ss_pred CCCCEE
Confidence 776543
|
|
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=96.07 E-value=1.5 Score=42.51 Aligned_cols=114 Identities=11% Similarity=0.061 Sum_probs=67.7
Q ss_pred cCCcceEEEeeCCC----CCEEEEEecCCeEEEEEcc-----CCceeEEEecc---CCC--eEEEEEecCCCCEEEEEcC
Q psy14906 160 RWNSCVNVLEPSPV----VDIIGVGLSNKKIILHNIL-----TDESLMEFIQT---WGP--VTALSFRTDGPPMMVSGSN 225 (583)
Q Consensus 160 ~~~~~i~~~~~s~~----~~~l~~~~~d~~i~iw~~~-----~~~~~~~~~~~---~~~--v~~~~~~~~~~~~l~s~~~ 225 (583)
+.-..|..+.|.|- -..|++......|.||-+. +++.+..-..+ .-+ -..+.|+|... +|+.-..
T Consensus 54 GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~-iL~VLT~ 132 (671)
T PF15390_consen 54 GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKA-ILTVLTA 132 (671)
T ss_pred eccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCc-eEEEEec
Confidence 33457888999985 3244445566789999985 22332221111 111 24568999988 6666555
Q ss_pred CCcEEEEeCCC--CeehhhhhhccccceEEEEEecCCCEEEEEeCC-CeEEEEE
Q psy14906 226 TGHLTVWNLED--RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD-NTLKLWI 276 (583)
Q Consensus 226 dg~i~vwd~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-~~i~~w~ 276 (583)
...-.++++.. .+....+ .-.+.|.|.+|.+||+.|+.+-.. =.-.+||
T Consensus 133 ~dvSV~~sV~~d~srVkaDi--~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd 184 (671)
T PF15390_consen 133 RDVSVLPSVHCDSSRVKADI--KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWD 184 (671)
T ss_pred CceeEeeeeeeCCceEEEec--cCCceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence 44434455542 2333333 346789999999999988766432 2346773
|
|
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.57 Score=47.29 Aligned_cols=149 Identities=10% Similarity=0.172 Sum_probs=94.0
Q ss_pred CcEEEEEecCceEEEEEcccCcccc------cc-CCCCC----------CCcccCeeEEEEeC--CCcEEEEeecCCcEE
Q psy14906 424 GNFVLIGYSSGHVDRFNIQSGAHRG------SY-GHDNQ----------PGHVGGVRGVVSDN--LNQIVISGGNDQTVK 484 (583)
Q Consensus 424 ~~~l~~~~~dg~i~i~d~~~~~~~~------~~-~~~~~----------~~h~~~v~~~~~s~--~~~~l~s~~~dg~i~ 484 (583)
..+++++. .+.|.||+...-.... .+ ..+.. ..-...|+-|.... +...|+.|.+||.|.
T Consensus 49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~ 127 (717)
T PF08728_consen 49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVL 127 (717)
T ss_pred CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEE
Confidence 56666655 6779999876432211 11 00000 00112344444433 446889999999999
Q ss_pred EEEccCC------------------CCCceEEeeccCCeeeEEec--cCCcEEEEEeCCceEEEEEcccc--ceE-Eeec
Q psy14906 485 VWHFKQT------------------GKPPLRSIKLDNGISFFRTH--QESSMLAVCLDDFTVNIIDIDTC--TII-RKLS 541 (583)
Q Consensus 485 iwd~~~~------------------~~~~~~~~~~~~~v~~~~~s--~~~~~l~~~~~dg~i~i~d~~~~--~~~-~~~~ 541 (583)
+|.++.- ..++...+......+.++++ ...+++|+++....|.||-.... +.. ..-.
T Consensus 128 ~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~ 207 (717)
T PF08728_consen 128 AYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPSH 207 (717)
T ss_pred EEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEEEEecccccccccccc
Confidence 9976311 01133445556788999998 88889999999998988866542 111 1111
Q ss_pred ccccceeeEEecCCC---c---EEEEEeCCCeEEEEeC
Q psy14906 542 GHMGQLTDADFSPDS---R---WLITASMDCTIRVWDI 573 (583)
Q Consensus 542 ~h~~~v~~l~~s~d~---~---~l~s~~~d~~i~vw~~ 573 (583)
.|...|.+|+|-++. . +|++++-.|.+.+|++
T Consensus 208 ~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 208 QHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred ccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 256779999997743 2 7888999999988877
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.052 Score=56.00 Aligned_cols=147 Identities=5% Similarity=-0.161 Sum_probs=91.6
Q ss_pred CcceEEEeeCCCCCEEEEEecCC--eEEEEEccCCceeE-----EEe------ccCCCeEEEEEecCCCCEEEEEcCCCc
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLSNK--KIILHNILTDESLM-----EFI------QTWGPVTALSFRTDGPPMMVSGSNTGH 228 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~d~--~i~iw~~~~~~~~~-----~~~------~~~~~v~~~~~~~~~~~~l~s~~~dg~ 228 (583)
.-+|..+...+|+...++..... .|..||+++-..-. -+. .......++.|+|.=....+....|+.
T Consensus 100 ~~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dls 179 (1405)
T KOG3630|consen 100 EIPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLS 179 (1405)
T ss_pred cccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccc
Confidence 34566677777877665544333 68889987542211 111 222456788899876545677888999
Q ss_pred EEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEecc-CCCCCeeEEEeeCCC
Q psy14906 229 LTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREG-HSAPPNYIQFYGNSS 307 (583)
Q Consensus 229 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~ 307 (583)
|++..+........- .......++++|+|.|+.++.|...|++.-|....+ ..+.+..... ....|.+++|.. ..
T Consensus 180 l~V~~~~~~~~~v~s-~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~le--ik~~ip~Pp~~e~yrvl~v~Wl~-t~ 255 (1405)
T KOG3630|consen 180 LRVKSTKQLAQNVTS-FPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLE--IKSEIPEPPVEENYRVLSVTWLS-TQ 255 (1405)
T ss_pred hhhhhhhhhhhhhcc-cCcccceeeEEeccccceeeEecCCCeEEEeecccc--eeecccCCCcCCCcceeEEEEec-ce
Confidence 998877543322221 134668899999999999999999999998843221 1111111111 136789999985 44
Q ss_pred CEEEE
Q psy14906 308 DNILS 312 (583)
Q Consensus 308 ~~l~~ 312 (583)
.+++.
T Consensus 256 eflvv 260 (1405)
T KOG3630|consen 256 EFLVV 260 (1405)
T ss_pred eEEEE
Confidence 45444
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.36 Score=45.84 Aligned_cols=143 Identities=7% Similarity=0.009 Sum_probs=81.3
Q ss_pred CCceEEEEccCCcEEEEEe-----------cCc-eEEEEEccc--Ccc--ccccCCCCCCCcccCeeEEEEeCCCcEEEE
Q psy14906 413 SKPTCVYITHCGNFVLIGY-----------SSG-HVDRFNIQS--GAH--RGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~-----------~dg-~i~i~d~~~--~~~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 476 (583)
.....++|.++|+++++-. ..+ .|.+++-.+ |+. ...+ .........+++.+++ ++++
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vf-----a~~l~~p~Gi~~~~~G-lyV~ 87 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVF-----AEELSMVTGLAVAVGG-VYVA 87 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEe-----ecCCCCccceeEecCC-EEEe
Confidence 5688999999999887753 223 777776543 222 1222 1223456889999988 4444
Q ss_pred eecCCcEEEEEccCCC-----CCce-EEeec-----cCCeeeEEeccCCcEEEEEeC-------------------CceE
Q psy14906 477 GGNDQTVKVWHFKQTG-----KPPL-RSIKL-----DNGISFFRTHQESSMLAVCLD-------------------DFTV 526 (583)
Q Consensus 477 ~~~dg~i~iwd~~~~~-----~~~~-~~~~~-----~~~v~~~~~s~~~~~l~~~~~-------------------dg~i 526 (583)
+.....++.|..... .+.+ ..+.. +.....++|.|||.+.++-+. .|.|
T Consensus 88 -~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i 166 (367)
T TIGR02604 88 -TPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGL 166 (367)
T ss_pred -CCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceE
Confidence 343333343543321 0111 11222 234778999999986665431 1445
Q ss_pred EEEEccccceEEeecccccceeeEEecCCCcEEEEEe
Q psy14906 527 NIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 527 ~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~ 563 (583)
.-++.++++......++ .....++|+++|+++++-.
T Consensus 167 ~r~~pdg~~~e~~a~G~-rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 167 FRYNPDGGKLRVVAHGF-QNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred EEEecCCCeEEEEecCc-CCCccceECCCCCEEEEcc
Confidence 66666554433222333 3467899999998877644
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PRK10115 protease 2; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=2.9 Score=43.53 Aligned_cols=188 Identities=10% Similarity=0.024 Sum_probs=95.7
Q ss_pred EccCCCEEEEEeC-C----CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC------Ce
Q psy14906 117 ILPFGPHLISVDE-E----SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN------KK 185 (583)
Q Consensus 117 is~~~~~l~s~~~-d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------~~ 185 (583)
+||||++|+.+.. + ..|++-|+.+|+.+.... ... . ..++|++|++.|+....+ ..
T Consensus 134 ~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i-----------~~~-~-~~~~w~~D~~~~~y~~~~~~~~~~~~ 200 (686)
T PRK10115 134 ITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELL-----------DNV-E-PSFVWANDSWTFYYVRKHPVTLLPYQ 200 (686)
T ss_pred ECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccc-----------cCc-c-eEEEEeeCCCEEEEEEecCCCCCCCE
Confidence 3999998886532 2 368899998886432221 111 1 459999999977766442 36
Q ss_pred EEEEEccCC--ceeEEEeccCCCeE-EEEEecCCCCEEEEEcC--CCcEEEEeCC--CCeehhhhhhcccc-ceEEEEEe
Q psy14906 186 IILHNILTD--ESLMEFIQTWGPVT-ALSFRTDGPPMMVSGSN--TGHLTVWNLE--DRQVENQIKKAHRK-VVTGAHFL 257 (583)
Q Consensus 186 i~iw~~~~~--~~~~~~~~~~~~v~-~~~~~~~~~~~l~s~~~--dg~i~vwd~~--~~~~~~~~~~~~~~-~v~~~~~~ 257 (583)
|+.+++.++ +....+........ .+..+.+++++++.... ++.+.+++.. +++....+ .+.. ....+. .
T Consensus 201 v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~-~ 277 (686)
T PRK10115 201 VWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFL--PRRKDHEYSLD-H 277 (686)
T ss_pred EEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEE--ECCCCCEEEEE-e
Confidence 888888877 44444444333333 23334477744443332 4578888853 33321112 1222 222222 2
Q ss_pred cCCCEEEEEeC-CCeEEEEEccCCCCCceeeEEeccC-C-CCCeeEEEeeCCCCEEEEeeCCCcEEEEEc
Q psy14906 258 YNEPLLVTSSP-DNTLKLWIFDKADGNGRLLRIREGH-S-APPNYIQFYGNSSDNILSAAGDSTLRIFNT 324 (583)
Q Consensus 258 ~~~~~l~s~~~-d~~i~~w~~~~~~~~~~~~~~~~~~-~-~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 324 (583)
..+.+++.... ....+|..++... .... ..+..+ . ..+..+.+. .+..+++...+|.-+++-+
T Consensus 278 ~~~~ly~~tn~~~~~~~l~~~~~~~-~~~~-~~l~~~~~~~~i~~~~~~--~~~l~~~~~~~g~~~l~~~ 343 (686)
T PRK10115 278 YQHRFYLRSNRHGKNFGLYRTRVRD-EQQW-EELIPPRENIMLEGFTLF--TDWLVVEERQRGLTSLRQI 343 (686)
T ss_pred CCCEEEEEEcCCCCCceEEEecCCC-cccC-eEEECCCCCCEEEEEEEE--CCEEEEEEEeCCEEEEEEE
Confidence 22333333222 2344555444331 1111 222223 2 356666665 3455556666666555544
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.42 Score=47.67 Aligned_cols=117 Identities=12% Similarity=0.159 Sum_probs=75.3
Q ss_pred CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEe--cCCCEEEEEeCCCeEEEEEc---c-
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL--YNEPLLVTSSPDNTLKLWIF---D- 278 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~d~~i~~w~~---~- 278 (583)
....-+.-+.-++ ..++-+....+.|||...+.+...-.-...+.|.++.|. |+++.+++.|..+.|.++.- +
T Consensus 30 ~~~~li~gss~~k-~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy 108 (631)
T PF12234_consen 30 SNPSLISGSSIKK-IAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDY 108 (631)
T ss_pred CCcceEeecccCc-EEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhh
Confidence 4555555566665 455555556799999998876554422457899999995 78899999999999999832 1
Q ss_pred -CCCCCceeeEE--eccCC-CCCeeEEEeeCCCCEEEEeeCCCcEEEEEcc
Q psy14906 279 -KADGNGRLLRI--REGHS-APPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325 (583)
Q Consensus 279 -~~~~~~~~~~~--~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 325 (583)
........++. +..|+ .+|.+..|.+ +|..++.++ ..+.++|-.
T Consensus 109 ~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~-~G~LvV~sG--Nqlfv~dk~ 156 (631)
T PF12234_consen 109 TNKGPSWAPIRKIDISSHTPHPIGDSIWLK-DGTLVVGSG--NQLFVFDKW 156 (631)
T ss_pred hcCCcccceeEEEEeecCCCCCccceeEec-CCeEEEEeC--CEEEEECCC
Confidence 11112222222 23344 5889999995 665554443 467787643
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes [] | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.64 Score=46.93 Aligned_cols=111 Identities=10% Similarity=0.148 Sum_probs=73.8
Q ss_pred eEEEeeC--CCCCEEEEEecCCeEEEEEccC-------C-------------ceeEEEeccCCCeEEEEEe--cCCCCEE
Q psy14906 165 VNVLEPS--PVVDIIGVGLSNKKIILHNILT-------D-------------ESLMEFIQTWGPVTALSFR--TDGPPMM 220 (583)
Q Consensus 165 i~~~~~s--~~~~~l~~~~~d~~i~iw~~~~-------~-------------~~~~~~~~~~~~v~~~~~~--~~~~~~l 220 (583)
|+.|... -+...|+.+..||.|.+|..++ . ++...+... ..+++++++ ...+ ++
T Consensus 103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~-~SaWGLdIh~~~~~r-lI 180 (717)
T PF08728_consen 103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVG-ASAWGLDIHDYKKSR-LI 180 (717)
T ss_pred eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecC-CceeEEEEEecCcce-EE
Confidence 4444433 2556889999999999997632 0 012222333 578899998 6666 88
Q ss_pred EEEcCCCcEEEEeCCCC--eehhhhhhccccceEEEEEecCC---C---EEEEEeCCCeEEEEEc
Q psy14906 221 VSGSNTGHLTVWNLEDR--QVENQIKKAHRKVVTGAHFLYNE---P---LLVTSSPDNTLKLWIF 277 (583)
Q Consensus 221 ~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~~v~~~~~~~~~---~---~l~s~~~d~~i~~w~~ 277 (583)
|+++....|.||-.... +....-...|...|.+++|.++. . .+++++-.|.+.+|++
T Consensus 181 AVSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 181 AVSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 88888888888865532 21111112366789999997653 2 7888889999999876
|
RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance []. |
| >KOG3616|consensus | Back alignment and domain information |
|---|
Probab=95.71 E-value=1.1 Score=44.68 Aligned_cols=72 Identities=15% Similarity=0.288 Sum_probs=50.6
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 235 (583)
.....++++.-+|.++.++.+..||.|++|+.......+..... .+-..+.|...| |++...|..+.-|.-+
T Consensus 12 k~~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~~~-~p~~nlv~tnhg---l~~~tsdrr~la~~~d 83 (1636)
T KOG3616|consen 12 KEDEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICEEA-KPKENLVFTNHG---LVTATSDRRALAWKED 83 (1636)
T ss_pred cccceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhhhc-CCccceeeeccc---eEEEeccchhheeecc
Confidence 34566778888899999999999999999998654432222222 445567777665 6677777788788643
|
|
| >KOG3630|consensus | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.16 Score=52.74 Aligned_cols=147 Identities=10% Similarity=-0.034 Sum_probs=95.1
Q ss_pred CCceEEEEccCCcEEEEEec--CceEEEEEcccCccccccCCCCCC------CcccCeeEEEEeCCCc-EEEEeecCCcE
Q psy14906 413 SKPTCVYITHCGNFVLIGYS--SGHVDRFNIQSGAHRGSYGHDNQP------GHVGGVRGVVSDNLNQ-IVISGGNDQTV 483 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~------~h~~~v~~~~~s~~~~-~l~s~~~dg~i 483 (583)
..+..+...+|+...++-.. +-.|+.||+++-..........+. .......++.|.|.-. ..+.+..|+.|
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl 180 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL 180 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence 56777778888776655443 347889998754332211100001 1223455677877532 35666778889
Q ss_pred EEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecc----cccceeeEEecCCCcEE
Q psy14906 484 KVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG----HMGQLTDADFSPDSRWL 559 (583)
Q Consensus 484 ~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----h~~~v~~l~~s~d~~~l 559 (583)
++..+.... .....+......++++|+|.|+.+++|...|++.-|... ++...++.+ ....|.+|.|-....+|
T Consensus 181 ~V~~~~~~~-~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~Wl~t~efl 258 (1405)
T KOG3630|consen 181 RVKSTKQLA-QNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVTWLSTQEFL 258 (1405)
T ss_pred hhhhhhhhh-hhhcccCcccceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEEEecceeEE
Confidence 888776442 233445666789999999999999999999999988754 333333322 13679999998777776
Q ss_pred EE
Q psy14906 560 IT 561 (583)
Q Consensus 560 ~s 561 (583)
++
T Consensus 259 vv 260 (1405)
T KOG3630|consen 259 VV 260 (1405)
T ss_pred EE
Confidence 64
|
|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.7 Score=46.75 Aligned_cols=187 Identities=9% Similarity=-0.007 Sum_probs=86.2
Q ss_pred EEEeeCe-EEEEEcCC------eEEEEeccceeeeeecc---cCccEEEEccCCCEEEEEeCC-----CcEEEEEcCCCc
Q psy14906 78 CLSSDFF-HIYTSANN------IIYAWRRGIDIVGTYKG---HTSPVHLILPFGPHLISVDEE-----SNVKVWDIKAEE 142 (583)
Q Consensus 78 ~~~~~~~-~~~~~~~~------~i~vw~~~~~~~~~~~~---h~~~v~~is~~~~~l~s~~~d-----g~i~iwd~~~~~ 142 (583)
++..++. ++.||.++ .+..||........+.. .......+..+++..+.||.+ ..+..||..+++
T Consensus 290 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 369 (534)
T PHA03098 290 SVVLNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESK 369 (534)
T ss_pred EEEECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEECCEEEEEeCCCCCEecceEEEEcCCCCc
Confidence 4445555 44555332 56777764433333322 111122235567777777765 357778877654
Q ss_pred EEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC------CeEEEEEccCCceeEEEeccCCCeEEEEEecCC
Q psy14906 143 TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN------KKIILHNILTDESLMEFIQTWGPVTALSFRTDG 216 (583)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~ 216 (583)
-...-... ...... +++ .-+++..+.|+.+ ..+..||..+++-...-......-...+...++
T Consensus 370 W~~~~~lp---------~~r~~~-~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~~~ 438 (534)
T PHA03098 370 WREEPPLI---------FPRYNP-CVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYHDG 438 (534)
T ss_pred eeeCCCcC---------cCCccc-eEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEECC
Confidence 32211111 001111 111 2256677777632 458889987654322111110111111223345
Q ss_pred CCEEEEEcCCC--------cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC-----CeEEEEEc
Q psy14906 217 PPMMVSGSNTG--------HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD-----NTLKLWIF 277 (583)
Q Consensus 217 ~~~l~s~~~dg--------~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~i~~w~~ 277 (583)
. +++.|+.++ .+.+||..+++-...-.......-.+++ .-+++.++.|+.+ ..+..||.
T Consensus 439 ~-iyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~ 510 (534)
T PHA03098 439 K-IYVIGGISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINASLC-IFNNKIYVVGGDKYEYYINEIEVYDD 510 (534)
T ss_pred E-EEEECCccCCCCCcccceEEEecCCCCceeeCCCCCcccccceEE-EECCEEEEEcCCcCCcccceeEEEeC
Confidence 5 667776432 3888998876432211001111111111 2267777777654 35666643
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.92 Score=44.91 Aligned_cols=147 Identities=7% Similarity=-0.040 Sum_probs=72.5
Q ss_pred CCCCEEEEEecC--CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCC---cEEEEeCCCCeehhhhhhc
Q psy14906 172 PVVDIIGVGLSN--KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTG---HLTVWNLEDRQVENQIKKA 246 (583)
Q Consensus 172 ~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~ 246 (583)
-++...++|+.+ ..+..||..+++-...-.-...........-+|+ +.+.|+.++ .+..||..+++-...-...
T Consensus 317 ~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~~g~-IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~ 395 (480)
T PHA02790 317 ANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASINNV-IYVIGGHSETDTTTEYLLPNHDQWQFGPSTY 395 (480)
T ss_pred ECCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEECCE-EEEecCcCCCCccEEEEeCCCCEEEeCCCCC
Confidence 367777777753 3577888765432221111111111122233565 777777553 4778888776433211001
Q ss_pred cccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC-----CcEEE
Q psy14906 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD-----STLRI 321 (583)
Q Consensus 247 ~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~i 321 (583)
....-.++ ..-+++..+.|+ .+..||. .+.....+..+...... .+++.. +++..+.|+.+ ..+..
T Consensus 396 ~~r~~~~~-~~~~~~IYv~GG---~~e~ydp--~~~~W~~~~~m~~~r~~-~~~~v~--~~~IYviGG~~~~~~~~~ve~ 466 (480)
T PHA02790 396 YPHYKSCA-LVFGRRLFLVGR---NAEFYCE--SSNTWTLIDDPIYPRDN-PELIIV--DNKLLLIGGFYRGSYIDTIEV 466 (480)
T ss_pred CccccceE-EEECCEEEEECC---ceEEecC--CCCcEeEcCCCCCCccc-cEEEEE--CCEEEEECCcCCCcccceEEE
Confidence 11111122 234566666664 4667744 44445544443322222 233333 67777777754 35777
Q ss_pred EEccccc
Q psy14906 322 FNTKSET 328 (583)
Q Consensus 322 wd~~~~~ 328 (583)
||..+++
T Consensus 467 Yd~~~~~ 473 (480)
T PHA02790 467 YNNRTYS 473 (480)
T ss_pred EECCCCe
Confidence 7776654
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.71 Score=46.13 Aligned_cols=105 Identities=18% Similarity=0.185 Sum_probs=70.1
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeC--CCCCEEEEEecCCeEEEEEcc---
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPS--PVVDIIGVGLSNKKIILHNIL--- 192 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s--~~~~~l~~~~~d~~i~iw~~~--- 192 (583)
|.-++.-++-+....+.|||...+....+-.+ ...+.|..+.|. |+++.+++.+..+.|.+|.-.
T Consensus 38 ss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f----------~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~d 107 (631)
T PF12234_consen 38 SSIKKIAVVDSSRSELTIWDTRSGVLEYEESF----------SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYD 107 (631)
T ss_pred cccCcEEEEECCCCEEEEEEcCCcEEEEeeee----------cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchh
Confidence 44444444444456899999999886655544 447889999985 688888877788889988642
Q ss_pred ------CCceeEEE--eccC-CCeEEEEEecCCCCEEEEEcCCCcEEEEeCC
Q psy14906 193 ------TDESLMEF--IQTW-GPVTALSFRTDGPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 193 ------~~~~~~~~--~~~~-~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~ 235 (583)
+...+..+ ..++ .+|....|.++|. |++|+ .+.+.|+|-.
T Consensus 108 y~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~--LvV~s-GNqlfv~dk~ 156 (631)
T PF12234_consen 108 YTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGT--LVVGS-GNQLFVFDKW 156 (631)
T ss_pred hhcCCcccceeEEEEeecCCCCCccceeEecCCe--EEEEe-CCEEEEECCC
Confidence 11233333 2333 5899999999996 44444 2468888753
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.56 E-value=2.5 Score=40.95 Aligned_cols=105 Identities=12% Similarity=0.010 Sum_probs=65.3
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccC-CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTW-GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
....+|..+.+...|.+ -+|+.|| +..||..+++.+..-.... .+|..+.-.-.++ |..|+.+| +.+.+.+..+
T Consensus 162 l~d~~V~aLv~D~~g~l-WvgT~dG-L~~fd~~~gkalql~s~~~dk~I~al~~d~qg~--LWVGTdqG-v~~~e~~G~~ 236 (671)
T COG3292 162 LKDTPVVALVFDANGRL-WVGTPDG-LSYFDAGRGKALQLASPPLDKAINALIADVQGR--LWVGTDQG-VYLQEAEGWR 236 (671)
T ss_pred ccCccceeeeeeccCcE-EEecCCc-ceEEccccceEEEcCCCcchhhHHHHHHHhcCc--EEEEeccc-eEEEchhhcc
Confidence 34678888999888854 4577777 7788888888777655444 6777777777776 77787665 7777776533
Q ss_pred ehhhhhhccccceEEEEEecCCCEEEEEeCCC
Q psy14906 239 VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN 270 (583)
Q Consensus 239 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 270 (583)
.......-....|..+.-..+|. +-.|+..|
T Consensus 237 ~sn~~~~lp~~~I~ll~qD~qG~-lWiGTenG 267 (671)
T COG3292 237 ASNWGPMLPSGNILLLVQDAQGE-LWIGTENG 267 (671)
T ss_pred ccccCCCCcchheeeeecccCCC-EEEeeccc
Confidence 32222111233444444334443 45565555
|
|
| >PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others | Back alignment and domain information |
|---|
Probab=95.55 E-value=4.2 Score=45.03 Aligned_cols=156 Identities=13% Similarity=0.109 Sum_probs=93.5
Q ss_pred ccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 159 KRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 159 ~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
+.|...++.+.-+++|..+=. .++.++.||.....-...-......+..+.-.-||+ +.+ .++.. +-|+..+.
T Consensus 359 kaH~A~LTgv~~~~~ge~lRl--Hd~~LY~~d~~~~~Wk~~~~~~d~~~S~Ls~qgdG~-lYA---k~~~~-l~nLSs~~ 431 (1774)
T PF11725_consen 359 KAHIAHLTGVHTDPDGEQLRL--HDDRLYQFDPNTARWKPPPDKSDTPFSSLSRQGDGK-LYA---KDDDT-LVNLSSGQ 431 (1774)
T ss_pred HHHHHHhhccccCCCCCeEEe--ecCceeeeccccceecCCCCcccchhhhhcccCCCc-eEe---cCCCc-eeecCCCC
Confidence 467778888888888887754 677888888765422110112224556666666776 333 22221 23555544
Q ss_pred ehhhhhhccccceEEEEEecCCCE-EEEEeCCCeEEEEEccCCCCCcee----eEEeccCCCCCeeEEEeeCCCCEEEEe
Q psy14906 239 VENQIKKAHRKVVTGAHFLYNEPL-LVTSSPDNTLKLWIFDKADGNGRL----LRIREGHSAPPNYIQFYGNSSDNILSA 313 (583)
Q Consensus 239 ~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~i~~w~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~~~ 313 (583)
..... -..+.+...+++++. ++++-....+.+|+++...+.... ...+.+-.....++.+++ ..|+.+
T Consensus 432 ~~~~~----v~~l~sfSv~~~g~vA~L~~~d~q~~qL~~m~~~~a~~~p~~~~~L~L~dG~a~A~~VgLs~---drLFvA 504 (1774)
T PF11725_consen 432 MSEAE----VDKLKSFSVAPDGTVAMLTGKDGQTLQLHDMSPVDAPPTPRKTKTLQLADGKAQAQSVGLSN---DRLFVA 504 (1774)
T ss_pred cchhh----hhhcccccccCCCceeeeecCCCcceeeeccCccccccCccceeeeeccCCchhhhheeecC---CeEEEE
Confidence 22222 346677788899987 555555566699977655332222 222333334667788763 379999
Q ss_pred eCCCcEEEEEccccc
Q psy14906 314 AGDSTLRIFNTKSET 328 (583)
Q Consensus 314 ~~dg~i~iwd~~~~~ 328 (583)
..+|.++.=++...+
T Consensus 505 DseGkLYsa~l~~~~ 519 (1774)
T PF11725_consen 505 DSEGKLYSADLPAAQ 519 (1774)
T ss_pred eCCCCEEeccccccc
Confidence 999999888876543
|
It is an essential pathogenicity factor of approximately 198 kDa. Its injection into the host-plant is dependent upon the bacterial type III or Hrp secretion system []. The family is long and carries a number of predicted functional regions, including an ERMS or endoplasmic reticulum membrane retention signal at both the C- and the N-termini, a leucine-zipper motif from residues 539-560, and a nuclear localisation signal at 1358-1361. This conserved AvrE-family of effectors is among the few that are required for full virulence of many phytopathogenic pseudomonads, erwinias and pantoeas []. |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=95.54 E-value=2.1 Score=40.07 Aligned_cols=153 Identities=10% Similarity=0.147 Sum_probs=93.9
Q ss_pred EeeCCCCCEEEEEecCCeEEEEEccCC--ceeEEE-eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhh
Q psy14906 168 LEPSPVVDIIGVGLSNKKIILHNILTD--ESLMEF-IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK 244 (583)
Q Consensus 168 ~~~s~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 244 (583)
+-|. |.+.++.+...|.+.=|-++.. ...-.+ ....++|.++.|++|.+ .+|+--.+.+|.+++....+......
T Consensus 28 vFfD-DaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnk-ilAVQR~~~~v~f~nf~~d~~~l~~~ 105 (657)
T KOG2377|consen 28 VFFD-DANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNK-ILAVQRTSKTVDFCNFIPDNSQLEYT 105 (657)
T ss_pred eeec-cCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcc-eEEEEecCceEEEEecCCCchhhHHH
Confidence 4444 3333333444455666655422 222222 24457999999999999 99999999999999986544433332
Q ss_pred h---ccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee-CCCcEE
Q psy14906 245 K---AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA-GDSTLR 320 (583)
Q Consensus 245 ~---~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~ 320 (583)
. .....|....|+.+ .-+|.....| +.+|..+. ..+.++..+.|...|.-..|.++..-.|++.+ ..+++.
T Consensus 106 ~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~p---ekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~ln 180 (657)
T KOG2377|consen 106 QECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLP---EKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLN 180 (657)
T ss_pred HHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEch---hhhhhhhhhhcccCccEEEEccccceEeeeccccccccc
Confidence 2 22446889999876 5566665555 78887665 34455566678888998999874333333333 334444
Q ss_pred EEEcccc
Q psy14906 321 IFNTKSE 327 (583)
Q Consensus 321 iwd~~~~ 327 (583)
=+-++++
T Consensus 181 pf~~~~~ 187 (657)
T KOG2377|consen 181 PFHFRAG 187 (657)
T ss_pred cEEEeec
Confidence 4444443
|
|
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=95.25 E-value=2.9 Score=39.91 Aligned_cols=113 Identities=16% Similarity=0.199 Sum_probs=64.3
Q ss_pred cCCCCEEEEEcCCCcEEEEeCCCCeeh--hh-hhhccccceEEEEEec-----CCCEEEEEeCCCeEEEEEccCCCCC--
Q psy14906 214 TDGPPMMVSGSNTGHLTVWNLEDRQVE--NQ-IKKAHRKVVTGAHFLY-----NEPLLVTSSPDNTLKLWIFDKADGN-- 283 (583)
Q Consensus 214 ~~~~~~l~s~~~dg~i~vwd~~~~~~~--~~-~~~~~~~~v~~~~~~~-----~~~~l~s~~~d~~i~~w~~~~~~~~-- 283 (583)
+++...+++|+..|.++||+...+... .. +...-..+|..++.-. +...||.- .-+.+.+|.+....+.
T Consensus 34 ~~~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVL-hP~kl~vY~v~~~~g~~~ 112 (418)
T PF14727_consen 34 PSGSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVL-HPRKLSVYSVSLVDGTVE 112 (418)
T ss_pred CCCccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEe-cCCEEEEEEEEecCCCcc
Confidence 445558999999999999998654311 11 1112356787776532 23345554 4577888877443322
Q ss_pred ---ceeeEEeccCCC--CCeeEEEeeC----CCCEEEEeeCCCcEEEEEcccc
Q psy14906 284 ---GRLLRIREGHSA--PPNYIQFYGN----SSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 284 ---~~~~~~~~~~~~--~v~~~~~~~~----~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
.-.+.....|.- ....+++-|- ...++..-+.||.+.+|+-+.-
T Consensus 113 ~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~ 165 (418)
T PF14727_consen 113 HGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESF 165 (418)
T ss_pred cCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcE
Confidence 122233333322 2233333331 1367778888999999986553
|
|
| >PF14727 PHTB1_N: PTHB1 N-terminus | Back alignment and domain information |
|---|
Probab=95.23 E-value=3 Score=39.86 Aligned_cols=143 Identities=14% Similarity=0.114 Sum_probs=90.3
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCc-----EEEEeeccCCceEEecccCCcceEEEeeCC-----CCCEEEEEecCCeEEEE
Q psy14906 120 FGPHLISVDEESNVKVWDIKAEE-----TYLELSFDNDTFKIMGKRWNSCVNVLEPSP-----VVDIIGVGLSNKKIILH 189 (583)
Q Consensus 120 ~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-----~~~~l~~~~~d~~i~iw 189 (583)
+...+++|+..|.++|++...++ .+.+. .-..+|..++.-+ +...||+ -.-..+.+|
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~------------~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY 102 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLET------------QLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVY 102 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEEE------------ecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEE
Confidence 34689999999999999986543 23333 3456777776542 3345555 455678888
Q ss_pred EccCC--c-------eeEEEeccC--CCeEEEEEec----CCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEE
Q psy14906 190 NILTD--E-------SLMEFIQTW--GPVTALSFRT----DGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGA 254 (583)
Q Consensus 190 ~~~~~--~-------~~~~~~~~~--~~v~~~~~~~----~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~ 254 (583)
.+... . .+..+..|. .....++.-| .++.+++.-+.||.+.+|+-+.....+.+ .. ---...+
T Consensus 103 ~v~~~~g~~~~g~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~l-p~-~llPgPl 180 (418)
T PF14727_consen 103 SVSLVDGTVEHGNQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFL-PD-FLLPGPL 180 (418)
T ss_pred EEEecCCCcccCcEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEc-CC-CCCCcCe
Confidence 87321 1 112222221 2333444433 23458999999999999998765544433 12 2222346
Q ss_pred EEecCCCEEEEEeCCCeEEEEEc
Q psy14906 255 HFLYNEPLLVTSSPDNTLKLWIF 277 (583)
Q Consensus 255 ~~~~~~~~l~s~~~d~~i~~w~~ 277 (583)
.|.+....|++++.+..+.-|.+
T Consensus 181 ~Y~~~tDsfvt~sss~~l~~Yky 203 (418)
T PF14727_consen 181 CYCPRTDSFVTASSSWTLECYKY 203 (418)
T ss_pred EEeecCCEEEEecCceeEEEecH
Confidence 78888889999999988988865
|
|
| >KOG1898|consensus | Back alignment and domain information |
|---|
Probab=95.21 E-value=4.8 Score=42.19 Aligned_cols=107 Identities=16% Similarity=0.181 Sum_probs=61.6
Q ss_pred EEEEEecCCeEEEEEccCCceeEEEe---ccCCCeEEEEEecCC-----CCEEEEEcCCCcEEEEeCCCCeehhhhh-hc
Q psy14906 176 IIGVGLSNKKIILHNILTDESLMEFI---QTWGPVTALSFRTDG-----PPMMVSGSNTGHLTVWNLEDRQVENQIK-KA 246 (583)
Q Consensus 176 ~l~~~~~d~~i~iw~~~~~~~~~~~~---~~~~~v~~~~~~~~~-----~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~ 246 (583)
.++.+..+|.+..+.......+.++. .-...|.|+++.++. .++++.++.|+++++..+....++..+. ++
T Consensus 551 qiVvalSngelvyfe~d~sgql~E~~er~tl~~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~p~d~l~~ls~q~ 630 (1205)
T KOG1898|consen 551 QIVVALSNGELVYFEGDVSGQLNEFTERVTLSTDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLDPSDCLQPLSVQG 630 (1205)
T ss_pred EEEEEccCCeEEEEEeccCccceeeeeeeeeceeehhhccCCCCcchhhcceeeeeccccceeEEEecCcceEEEccccc
Confidence 44445555555544443222233332 223678899998875 2379999999999999988655554441 23
Q ss_pred cccceEEEEEec---CC------CEEEEEeCCCeEEEEEccCCCC
Q psy14906 247 HRKVVTGAHFLY---NE------PLLVTSSPDNTLKLWIFDKADG 282 (583)
Q Consensus 247 ~~~~v~~~~~~~---~~------~~l~s~~~d~~i~~w~~~~~~~ 282 (583)
-..++.++.+-+ ++ -+|.+|=..|.+.-+-++.-.+
T Consensus 631 l~~~~~s~~iv~~~~~~~~~~~~L~l~~GL~NGvllR~~id~v~G 675 (1205)
T KOG1898|consen 631 LSSPPESLCIVEMEATGGTDVAQLYLLIGLRNGVLLRFVIDTVTG 675 (1205)
T ss_pred cCCCccceEEEEecccCCccceeEEEEecccccEEEEEEeccccc
Confidence 344555555533 22 2566666777655554454433
|
|
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=95.20 E-value=1 Score=34.42 Aligned_cols=105 Identities=14% Similarity=0.135 Sum_probs=69.3
Q ss_pred CCCce-EEEEeeCCeEEEEecCCcE--------EEeecCCCCCCeEEEEe---e----CeEEEEEcCCeEEEEeccceee
Q psy14906 41 RRKET-LFVTCVGKAFHVYGCNHFK--------LLSVSPQHEDDITCLSS---D----FFHIYTSANNIIYAWRRGIDIV 104 (583)
Q Consensus 41 ~~~~~-~i~~~~~~~i~v~d~~~~~--------~~~~~~~h~~~v~~~~~---~----~~~~~~~~~~~i~vw~~~~~~~ 104 (583)
|+.+. +.+++..+.|.|++..... .+..| .-...|+|++. + ...|..+....+..||.....-
T Consensus 7 DG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~L-Nin~~italaaG~l~~~~~~D~LliGt~t~llaYDV~~N~d 85 (136)
T PF14781_consen 7 DGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFL-NINQEITALAAGRLKPDDGRDCLLIGTQTSLLAYDVENNSD 85 (136)
T ss_pred CCCceeEEEEecCCEEEEECCCccccccccccCceeEE-ECCCceEEEEEEecCCCCCcCEEEEeccceEEEEEcccCch
Confidence 44443 3445589999999977432 22323 25677888874 2 3588888899999999876655
Q ss_pred eeecccCccEEEE-----cc-CCCEEEEEeCCCcEEEEEcCCCcEEEEe
Q psy14906 105 GTYKGHTSPVHLI-----LP-FGPHLISVDEESNVKVWDIKAEETYLEL 147 (583)
Q Consensus 105 ~~~~~h~~~v~~i-----s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 147 (583)
..++.-.+.|.++ .. +...++. +.+-.|.-+|.+..+...+.
T Consensus 86 ~Fyke~~DGvn~i~~g~~~~~~~~l~iv-GGncsi~Gfd~~G~e~fWtV 133 (136)
T PF14781_consen 86 LFYKEVPDGVNAIVIGKLGDIPSPLVIV-GGNCSIQGFDYEGNEIFWTV 133 (136)
T ss_pred hhhhhCccceeEEEEEecCCCCCcEEEE-CceEEEEEeCCCCcEEEEEe
Confidence 5666667778776 22 3344444 44677888887776666554
|
|
| >PRK13684 Ycf48-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.19 E-value=2.7 Score=39.23 Aligned_cols=149 Identities=7% Similarity=-0.040 Sum_probs=84.7
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccC-ccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSG-AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
..+..+.+.|++.+++++. .|.+..- ...+ +.-.... ..-...++++.+.++++.++.+ ..|.+++=..+.+
T Consensus 173 g~~~~i~~~~~g~~v~~g~-~G~i~~s-~~~gg~tW~~~~----~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G 245 (334)
T PRK13684 173 GVVRNLRRSPDGKYVAVSS-RGNFYST-WEPGQTAWTPHQ----RNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDL 245 (334)
T ss_pred ceEEEEEECCCCeEEEEeC-CceEEEE-cCCCCCeEEEee----CCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCC
Confidence 4577888889887776654 4544332 1122 2111111 2445678999999999876655 4576643223332
Q ss_pred CCCceEEee-----ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeec---ccccceeeEEecCCCcEEEEEe
Q psy14906 492 GKPPLRSIK-----LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLS---GHMGQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 492 ~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~h~~~v~~l~~s~d~~~l~s~~ 563 (583)
..-.... ....+..+.+.|++..++++ .+|.+. ...+.++.-.... +-......+.|..+++.++ .+
T Consensus 246 --~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~-~G 320 (334)
T PRK13684 246 --ESWSKPIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFV-LG 320 (334)
T ss_pred --CccccccCCccccccceeeEEEcCCCCEEEEc-CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEE-EC
Confidence 1111111 12357788999988766554 566554 3445454433332 2223577788877766655 55
Q ss_pred CCCeEEEEeC
Q psy14906 564 MDCTIRVWDI 573 (583)
Q Consensus 564 ~d~~i~vw~~ 573 (583)
..|.|.-|+-
T Consensus 321 ~~G~il~~~~ 330 (334)
T PRK13684 321 QRGVLLRYVG 330 (334)
T ss_pred CCceEEEecC
Confidence 6888887763
|
|
| >KOG2280|consensus | Back alignment and domain information |
|---|
Probab=95.13 E-value=1.4 Score=44.08 Aligned_cols=215 Identities=9% Similarity=0.013 Sum_probs=107.4
Q ss_pred cCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eCeEEEEEcCCeEEEEeccceeeeee
Q psy14906 30 NHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DFFHIYTSANNIIYAWRRGIDIVGTY 107 (583)
Q Consensus 30 ~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~~i~vw~~~~~~~~~~ 107 (583)
-+-|.++..+|..-..+ ++.--.|+||++ +|+++..+--....+..+.+ +..+|....+|++.+++.-++.+..+
T Consensus 43 ~gGpIAV~r~p~~~~~~--~~a~~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~ge~ie~~ 119 (829)
T KOG2280|consen 43 FGGPIAVTRSPSKLVPL--YSARPYIRIFNI-SGQLLGRILWKHGELIGMGWSDDEELICVQKDGTVHVYGLLGEFIESN 119 (829)
T ss_pred cCCceEEEecccccccc--cccceeEEEEec-cccchHHHHhcCCCeeeecccCCceEEEEeccceEEEeecchhhhccc
Confidence 34566677765433322 244556899985 46666554433337888888 44899999999999999866544432
Q ss_pred ----cccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCC---EEE
Q psy14906 108 ----KGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD---IIG 178 (583)
Q Consensus 108 ----~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~---~l~ 178 (583)
+.....|... ..+|=.+. ..+|.+.+-+-.....+.+.+-.+ ...-+-.|-...+++. .++
T Consensus 120 svg~e~~~~~I~ec~~f~~GVavl--t~~g~v~~i~~~~~~~~~~~~diP--------~~~~~~~~Wt~~~~~~~~~~ll 189 (829)
T KOG2280|consen 120 SVGFESQMSDIVECRFFHNGVAVL--TVSGQVILINGVEEPKLRKMPDIP--------YNELPKSCWTVFQPHRQSTILL 189 (829)
T ss_pred ccccccccCceeEEEEecCceEEE--ecCCcEEEEcCCCcchhhhCCCCC--------CccCCCcceeEecCCCcceeEE
Confidence 1111122221 33332222 234444433322221222222000 1111112222222211 111
Q ss_pred -EEecCCeEEEEEccCC-ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEE
Q psy14906 179 -VGLSNKKIILHNILTD-ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF 256 (583)
Q Consensus 179 -~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~ 256 (583)
+.-..+ ..+.-..++ .....+......+..+..||+.+ +|+--...|.+.+-+.+..+....+.-........++|
T Consensus 190 ~v~~~v~-~~~~q~~~~~~q~~~~~~~~~~~~ki~VS~n~~-~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p~qm~W 267 (829)
T KOG2280|consen 190 DVDVAVG-LHICQVEESRVQLHALSWPNSSVVKISVSPNRR-FLALYTETGKIWVVSIDLSQILCEFNCTDHDPPKQMAW 267 (829)
T ss_pred eechhhh-hcccceecccccccccCCCCceEEEEEEcCCcc-eEEEEecCCcEEEEecchhhhhhccCCCCCCchHhcee
Confidence 110111 011111111 11122222236788899999998 88888899999999988777777763222333335666
Q ss_pred ecC
Q psy14906 257 LYN 259 (583)
Q Consensus 257 ~~~ 259 (583)
..+
T Consensus 268 cgn 270 (829)
T KOG2280|consen 268 CGN 270 (829)
T ss_pred ecC
Confidence 433
|
|
| >COG5276 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.08 E-value=2.2 Score=37.53 Aligned_cols=238 Identities=11% Similarity=0.061 Sum_probs=135.3
Q ss_pred ecCCCC-CCeEEEEeeCeEEEEEcCCeEEEEeccceeeeeecccCccEEE---------EccCCCEEEEEeCCCcEEEEE
Q psy14906 68 VSPQHE-DDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHL---------ILPFGPHLISVDEESNVKVWD 137 (583)
Q Consensus 68 ~~~~h~-~~v~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~---------is~~~~~l~s~~~dg~i~iwd 137 (583)
.+-+|. ..|.++...+.+...+....+.+.|+.... +..|...+.. +--.+++...+..+.-++|.|
T Consensus 36 ~~vghfg~~vsavdv~~~ya~v~qG~~l~i~ditn~~---~~t~~~l~~~i~~~~l~~Dv~vse~yvyvad~ssGL~IvD 112 (370)
T COG5276 36 AYVGHFGKGVSAVDVRGAYAYVGQGFILAILDITNVS---LQTHDVLLSVINARDLFADVRVSEEYVYVADWSSGLRIVD 112 (370)
T ss_pred EEeeeccCCcccccccccccccccCceEeeccccCcc---cccCcceEEEEehhhhhheeEecccEEEEEcCCCceEEEe
Confidence 344565 667777777777777777777777754322 1223333322 233567888888888899999
Q ss_pred cCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCC---ceeEEEeccCCCeEEEEEec
Q psy14906 138 IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD---ESLMEFIQTWGPVTALSFRT 214 (583)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~~~~~~ 214 (583)
+.+...-..+.+- ...+--.++..+ |++..++..+.-+.+.|+.+. ....++......-..++.|-
T Consensus 113 IS~P~sP~~~~~l---------nt~gyaygv~vs--Gn~aYVadlddgfLivdvsdpssP~lagrya~~~~d~~~v~ISG 181 (370)
T COG5276 113 ISTPDSPTLIGFL---------NTDGYAYGVYVS--GNYAYVADLDDGFLIVDVSDPSSPQLAGRYALPGGDTHDVAISG 181 (370)
T ss_pred ccCCCCcceeccc---------cCCceEEEEEec--CCEEEEeeccCcEEEEECCCCCCceeeeeeccCCCCceeEEEec
Confidence 9886544333211 112334444444 788877775666778888654 33344444444456666664
Q ss_pred CCCCEEEEEcCCCcEEEEeCCCCeehhhhhh-ccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC
Q psy14906 215 DGPPMMVSGSNTGHLTVWNLEDRQVENQIKK-AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH 293 (583)
Q Consensus 215 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~ 293 (583)
+ ....+..|+-+.+-|+.+.....-+.. .....+.++..+++..+++... .| +.+-|.+.+. ........+
T Consensus 182 n---~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~-eg-vlivd~s~~s-sp~~~gsye-- 253 (370)
T COG5276 182 N---YAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYD-EG-VLIVDVSGPS-SPTVFGSYE-- 253 (370)
T ss_pred C---eEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEcc-cc-eEEEecCCCC-CceEeeccc--
Confidence 4 567777889999999976532222201 1123677777777766665543 33 5555443221 112222221
Q ss_pred CCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccc
Q psy14906 294 SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 294 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
+..+.++.-.|-.+++......+.-+.+-|..+.
T Consensus 254 t~~p~~~s~v~Vs~~~~Yvadga~gl~~idisnp 287 (370)
T COG5276 254 TSNPVSISTVPVSGEYAYVADGAKGLPIIDISNP 287 (370)
T ss_pred cCCcccccceecccceeeeeccccCceeEeccCC
Confidence 2233333222234667777777777777776553
|
|
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.55 Score=44.38 Aligned_cols=130 Identities=6% Similarity=0.058 Sum_probs=85.9
Q ss_pred eCCeEEEEecCCcEEEeecCCCCCCeEEEEe--------eCeEEEEEcCCeEEEEec--cceeeeeecc----cCccEEE
Q psy14906 51 VGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--------DFFHIYTSANNIIYAWRR--GIDIVGTYKG----HTSPVHL 116 (583)
Q Consensus 51 ~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--------~~~~~~~~~~~~i~vw~~--~~~~~~~~~~----h~~~v~~ 116 (583)
.-+.++-.|++.|+.+....-|...+....+ +.+.++|-++..|.--|+ .+..+...+. ....-.+
T Consensus 488 ~~~kLykmDIErGkvveeW~~~ddvvVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~esKdY~tKn~Fss 567 (776)
T COG5167 488 ERDKLYKMDIERGKVVEEWDLKDDVVVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVESKDYKTKNKFSS 567 (776)
T ss_pred CcccceeeecccceeeeEeecCCcceeecCCchhHHhcCccceEEeecccceEEecccccCCceeeeeehhccccccccc
Confidence 4556777788899998888877776544443 224566666666655553 3332222211 1111122
Q ss_pred -EccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEcc
Q psy14906 117 -ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNIL 192 (583)
Q Consensus 117 -is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~ 192 (583)
......|+|.++..|.|+++|--.-+....++ +....|..+..+.+|+++++.+.. .+.+-|+.
T Consensus 568 ~~tTesGyIa~as~kGDirLyDRig~rAKtalP-----------~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~~ 632 (776)
T COG5167 568 GMTTESGYIAAASRKGDIRLYDRIGKRAKTALP-----------GLGDAIKHIDVTANGKHILATCKN-YLLLTDVP 632 (776)
T ss_pred cccccCceEEEecCCCceeeehhhcchhhhcCc-----------ccccceeeeEeecCCcEEEEeecc-eEEEEecc
Confidence 24456799999999999999976544444554 778899999999999988877664 67777764
|
|
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.04 E-value=1.3 Score=41.32 Aligned_cols=162 Identities=14% Similarity=0.167 Sum_probs=97.3
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCcccc-ccCCCCCCC-cccCee-EEEEeCCCcEEEEeecCCcEEEE-Ec
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRG-SYGHDNQPG-HVGGVR-GVVSDNLNQIVISGGNDQTVKVW-HF 488 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~-h~~~v~-~~~~s~~~~~l~s~~~dg~i~iw-d~ 488 (583)
..+..+-..|||+++++-+. ..+.++++.+..... ++.... .+ ....|+ ++..-..|.-+..++.||-|.-| |.
T Consensus 221 ~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~ds-pg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdv 298 (733)
T COG4590 221 SDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDS-PGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDV 298 (733)
T ss_pred cchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcC-CCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeee
Confidence 56778889999999988766 668888876544321 111000 11 011222 22223356667888899998877 55
Q ss_pred cCCCCCce---EEeecc-CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeC
Q psy14906 489 KQTGKPPL---RSIKLD-NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564 (583)
Q Consensus 489 ~~~~~~~~---~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~ 564 (583)
.......+ +.++.. .++..+.--.+.+-+++-+..|++.++.....+.+..-. --..+.-+++||.+.+|++-.
T Consensus 299 r~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~-~~~~~~~~~~Sp~~~~Ll~e~- 376 (733)
T COG4590 299 RRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFER-AYQAPQLVAMSPNQAYLLSED- 376 (733)
T ss_pred ecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhh-hhcCcceeeeCcccchheeec-
Confidence 44432222 222222 344444433445567777888888888765554443222 223677789999999998654
Q ss_pred CCeEEEEeCCCccc
Q psy14906 565 DCTIRVWDIPSSQL 578 (583)
Q Consensus 565 d~~i~vw~~~~~~~ 578 (583)
.|.++++.+++..+
T Consensus 377 ~gki~~~~l~Nr~P 390 (733)
T COG4590 377 QGKIRLAQLENRNP 390 (733)
T ss_pred CCceEEEEecCCCC
Confidence 56799998877543
|
|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
Probab=95.03 E-value=2.3 Score=42.12 Aligned_cols=169 Identities=7% Similarity=-0.104 Sum_probs=82.0
Q ss_pred CeEEEEecCCcEEEe--ecCCCCCCeEEEEeeCeE-EEEEcC--CeEEEEeccceeeeeeccc---CccEEEEccCCCEE
Q psy14906 53 KAFHVYGCNHFKLLS--VSPQHEDDITCLSSDFFH-IYTSAN--NIIYAWRRGIDIVGTYKGH---TSPVHLILPFGPHL 124 (583)
Q Consensus 53 ~~i~v~d~~~~~~~~--~~~~h~~~v~~~~~~~~~-~~~~~~--~~i~vw~~~~~~~~~~~~h---~~~v~~is~~~~~l 124 (583)
..+..||..+.+-.. .++........++.++++ ++||.+ ..+..||........+..- ........-+|+..
T Consensus 287 ~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~r~~~~~~~~~g~IY 366 (480)
T PHA02790 287 NNAIAVNYISNNWIPIPPMNSPRLYASGVPANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKPRCNPAVASINNVIY 366 (480)
T ss_pred CeEEEEECCCCEEEECCCCCchhhcceEEEECCEEEEECCcCCCCceEEEECCCCeEEECCCCCCCCcccEEEEECCEEE
Confidence 357789988765433 232222223344457764 445543 3678888643322222221 11112235577777
Q ss_pred EEEeCCC---cEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEE--
Q psy14906 125 ISVDEES---NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLME-- 199 (583)
Q Consensus 125 ~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~-- 199 (583)
+.||.++ .+..||..+.+-...-... ...... ++ ..-++++.+.| |.+.+||.++++-...
T Consensus 367 viGG~~~~~~~ve~ydp~~~~W~~~~~m~---------~~r~~~-~~-~~~~~~IYv~G---G~~e~ydp~~~~W~~~~~ 432 (480)
T PHA02790 367 VIGGHSETDTTTEYLLPNHDQWQFGPSTY---------YPHYKS-CA-LVFGRRLFLVG---RNAEFYCESSNTWTLIDD 432 (480)
T ss_pred EecCcCCCCccEEEEeCCCCEEEeCCCCC---------Cccccc-eE-EEECCEEEEEC---CceEEecCCCCcEeEcCC
Confidence 7776543 4677887765432211110 011111 12 12356666666 3567888876543322
Q ss_pred EeccCCCeEEEEEecCCCCEEEEEcCC-----CcEEEEeCCCCe
Q psy14906 200 FIQTWGPVTALSFRTDGPPMMVSGSNT-----GHLTVWNLEDRQ 238 (583)
Q Consensus 200 ~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~ 238 (583)
+........ ++ .-+++ +.+.|+.+ ..+..||..+++
T Consensus 433 m~~~r~~~~-~~-v~~~~-IYviGG~~~~~~~~~ve~Yd~~~~~ 473 (480)
T PHA02790 433 PIYPRDNPE-LI-IVDNK-LLLIGGFYRGSYIDTIEVYNNRTYS 473 (480)
T ss_pred CCCCccccE-EE-EECCE-EEEECCcCCCcccceEEEEECCCCe
Confidence 221112222 22 23555 77777754 346666666543
|
|
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.99 Score=37.88 Aligned_cols=104 Identities=12% Similarity=0.141 Sum_probs=66.4
Q ss_pred EEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCC------ceEEEE---Ecc--ccceEE-ee
Q psy14906 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDD------FTVNII---DID--TCTIIR-KL 540 (583)
Q Consensus 473 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~i~i~---d~~--~~~~~~-~~ 540 (583)
.|+.+...+.|.+|++.....+++..+..-+.|..+.++..|.+|++--.+ ..+++| +.. ..+++. ++
T Consensus 30 ~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~vRi 109 (215)
T PF14761_consen 30 ALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRVRI 109 (215)
T ss_pred eEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEEEE
Confidence 343335557899999996555777888888999999999999999985432 256665 221 112221 22
Q ss_pred ccc---------------------ccceeeEEecCCCcEEEEEeCCCeEEEEeCCCcc
Q psy14906 541 SGH---------------------MGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 541 ~~h---------------------~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~ 577 (583)
.|| ..++.+++-.|-..-|+.|+ ++.+.+|.+..+.
T Consensus 110 aG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~-~~~l~lf~l~~~~ 166 (215)
T PF14761_consen 110 AGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC-GNKLVLFTLKYQT 166 (215)
T ss_pred cccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc-CCEEEEEEEEEEE
Confidence 222 34577788777433455454 5678899876543
|
|
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=95.00 E-value=3.4 Score=39.37 Aligned_cols=150 Identities=9% Similarity=0.066 Sum_probs=82.9
Q ss_pred cceEEEeeCCCCCEEEEEecCCeEEEEEccCCcee--EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee-
Q psy14906 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL--MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV- 239 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~- 239 (583)
+....+..++|+.+++++..-..++-|| .|+.. ..-......++++.|.+++. +++++ ..|.+. +....++.
T Consensus 239 Gsf~~v~~~~dG~~~~vg~~G~~~~s~d--~G~~~W~~~~~~~~~~l~~v~~~~dg~-l~l~g-~~G~l~-~S~d~G~~~ 313 (398)
T PLN00033 239 GTFSTVNRSPDGDYVAVSSRGNFYLTWE--PGQPYWQPHNRASARRIQNMGWRADGG-LWLLT-RGGGLY-VSKGTGLTE 313 (398)
T ss_pred cceeeEEEcCCCCEEEEECCccEEEecC--CCCcceEEecCCCccceeeeeEcCCCC-EEEEe-CCceEE-EecCCCCcc
Confidence 3455567788988888775543333344 23321 11122336789999999998 55544 556544 34444431
Q ss_pred ----hhhhhhc-cccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee
Q psy14906 240 ----ENQIKKA-HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 240 ----~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 314 (583)
....... ....+.++.|.+++..+++| ..|.+... .......+.......-....+.+.|.+ .+..+..+
T Consensus 314 ~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s--~D~G~tW~~~~~~~~~~~~ly~v~f~~--~~~g~~~G 388 (398)
T PLN00033 314 EDFDFEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRS--TDGGKSWKRDKGADNIAANLYSVKFFD--DKKGFVLG 388 (398)
T ss_pred cccceeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEe--CCCCcceeEccccCCCCcceeEEEEcC--CCceEEEe
Confidence 1222111 12358889999887765555 67766655 222112222221223345678888863 34566666
Q ss_pred CCCcEEEE
Q psy14906 315 GDSTLRIF 322 (583)
Q Consensus 315 ~dg~i~iw 322 (583)
.+|.|.-|
T Consensus 389 ~~G~il~~ 396 (398)
T PLN00033 389 NDGVLLRY 396 (398)
T ss_pred CCcEEEEe
Confidence 77887655
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=94.82 E-value=2.7 Score=37.36 Aligned_cols=140 Identities=16% Similarity=0.152 Sum_probs=79.5
Q ss_pred EEEeeCeEEEE-E---cCCeEEEEeccceeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEE-cCCCcE-EEEeeccC
Q psy14906 78 CLSSDFFHIYT-S---ANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWD-IKAEET-YLELSFDN 151 (583)
Q Consensus 78 ~~~~~~~~~~~-~---~~~~i~vw~~~~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd-~~~~~~-~~~~~~~~ 151 (583)
+++.|+..+++ . ....++++..++.....+.+..-.--++++++...+....+...+++. ..+++. ...+...
T Consensus 30 AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~- 108 (253)
T PF10647_consen 30 AVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWP- 108 (253)
T ss_pred EECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCCccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEeccc-
Confidence 34447754433 3 334777777766555545444222223477776666655566666664 233322 2222211
Q ss_pred CceEEecccCCcceEEEeeCCCCCEEEEEe---cCCeEEEEEccC---C------ceeEEEeccCCCeEEEEEecCCCCE
Q psy14906 152 DTFKIMGKRWNSCVNVLEPSPVVDIIGVGL---SNKKIILHNILT---D------ESLMEFIQTWGPVTALSFRTDGPPM 219 (583)
Q Consensus 152 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~d~~i~iw~~~~---~------~~~~~~~~~~~~v~~~~~~~~~~~~ 219 (583)
.....|..+++||||..+|... .++.|.+--+.. + ..+.........+..++|.+++. +
T Consensus 109 --------~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~-L 179 (253)
T PF10647_consen 109 --------GLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDST-L 179 (253)
T ss_pred --------ccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCE-E
Confidence 1122899999999999998776 246777765542 2 11111223346899999999998 5
Q ss_pred EEEEcCCC
Q psy14906 220 MVSGSNTG 227 (583)
Q Consensus 220 l~s~~~dg 227 (583)
++.+...+
T Consensus 180 ~V~~~~~~ 187 (253)
T PF10647_consen 180 VVLGRSAG 187 (253)
T ss_pred EEEeCCCC
Confidence 55554433
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >KOG2377|consensus | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.58 Score=43.54 Aligned_cols=155 Identities=11% Similarity=0.139 Sum_probs=94.7
Q ss_pred ceEEEEccCCcEEEEEecCceEEEEEcccCcc--ccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCC
Q psy14906 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH--RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG 492 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 492 (583)
.+.+-|+..++.+++.. .|.+.-|-+..... ...+. ....++|.++.||+|.+.||.--.|++|.+.+.....
T Consensus 25 sngvFfDDaNkqlfavr-SggatgvvvkgpndDVpiSfd----m~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~ 99 (657)
T KOG2377|consen 25 SNGVFFDDANKQLFAVR-SGGATGVVVKGPNDDVPISFD----MDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDN 99 (657)
T ss_pred ccceeeccCcceEEEEe-cCCeeEEEEeCCCCCCCceee----ecCCCceeEEEeccCcceEEEEecCceEEEEecCCCc
Confidence 34455555455554443 34455555443221 22221 3456799999999999999999999999999986552
Q ss_pred CCceEEeec---cCCeeeEEeccCCcEEEEEeCCceEEEEEcccc-ceEEeecccccceeeEEecCCCcEEEEEe--CCC
Q psy14906 493 KPPLRSIKL---DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTC-TIIRKLSGHMGQLTDADFSPDSRWLITAS--MDC 566 (583)
Q Consensus 493 ~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~h~~~v~~l~~s~d~~~l~s~~--~d~ 566 (583)
.+.....++ ...|....|+.+ .-+|.....| +.+|-+... +.++..+.|+..|.--.|.++-+.+.-++ ..+
T Consensus 100 ~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n 177 (657)
T KOG2377|consen 100 SQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLEN 177 (657)
T ss_pred hhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeecccccc
Confidence 222222222 235888899876 5566655554 667765443 33455667888899999999887643332 344
Q ss_pred eEEEEeCCCc
Q psy14906 567 TIRVWDIPSS 576 (583)
Q Consensus 567 ~i~vw~~~~~ 576 (583)
++.=+.+.++
T Consensus 178 ~lnpf~~~~~ 187 (657)
T KOG2377|consen 178 VLNPFHFRAG 187 (657)
T ss_pred ccccEEEeec
Confidence 4444444433
|
|
| >COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=94.79 E-value=2 Score=35.64 Aligned_cols=151 Identities=11% Similarity=0.026 Sum_probs=80.6
Q ss_pred CCCEEEEEec--CCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccc
Q psy14906 173 VVDIIGVGLS--NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKV 250 (583)
Q Consensus 173 ~~~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~ 250 (583)
+|.++.+.+. ...|++||+.+++.+..-.-....+..=-...-+.++..-.-.+|.-..+|.++-+++..+ ...+.
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~--~y~Ge 132 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRF--SYEGE 132 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhccc--ccCCc
Confidence 4555655543 3479999999998887655332233322222334434444456788889999988888777 23444
Q ss_pred eEEEEEecCCCEEEEEeCCCeEEEEEccCCC--CCceeeEEeccC-CCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccc
Q psy14906 251 VTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD--GNGRLLRIREGH-SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 251 v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~--~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
=..++. |+..|+.++...+++.- |.++ .......+..+. -..++.+.|- +|...+-.=.+..|...+..++
T Consensus 133 GWgLt~--d~~~LimsdGsatL~fr--dP~tfa~~~~v~VT~~g~pv~~LNELE~V--dG~lyANVw~t~~I~rI~p~sG 206 (262)
T COG3823 133 GWGLTS--DDKNLIMSDGSATLQFR--DPKTFAELDTVQVTDDGVPVSKLNELEWV--DGELYANVWQTTRIARIDPDSG 206 (262)
T ss_pred ceeeec--CCcceEeeCCceEEEec--CHHHhhhcceEEEEECCeecccccceeee--ccEEEEeeeeecceEEEcCCCC
Confidence 455543 55556665444444444 3221 111222222221 1234556665 5655554444555555666655
Q ss_pred ccce
Q psy14906 328 TSNK 331 (583)
Q Consensus 328 ~~~~ 331 (583)
+...
T Consensus 207 rV~~ 210 (262)
T COG3823 207 RVVA 210 (262)
T ss_pred cEEE
Confidence 5433
|
|
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=94.73 E-value=2.9 Score=37.21 Aligned_cols=86 Identities=14% Similarity=0.176 Sum_probs=55.6
Q ss_pred ccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC------CCcEEEEeecCCcEEEEEccCCCCC
Q psy14906 421 THCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN------LNQIVISGGNDQTVKVWHFKQTGKP 494 (583)
Q Consensus 421 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~------~~~~l~s~~~dg~i~iwd~~~~~~~ 494 (583)
.++.+.=+.|...|.|-+||+. |..++.+.. .+.-..-+.|+..| .+.+|+---.||+|..+|..++ +
T Consensus 209 d~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as---~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG--~ 282 (336)
T TIGR03118 209 DADRNDEVAGAGLGYVNVFTLN-GQLLRRVAS---SGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSG--A 282 (336)
T ss_pred CCcccccccCCCcceEEEEcCC-CcEEEEecc---CCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCC--c
Confidence 3344444455566889999874 556665532 35556677787765 4567777678999999999887 6
Q ss_pred ceEEeecc-------CCeeeEEecc
Q psy14906 495 PLRSIKLD-------NGISFFRTHQ 512 (583)
Q Consensus 495 ~~~~~~~~-------~~v~~~~~s~ 512 (583)
.+-.+... ...+.+.|..
T Consensus 283 ~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 283 QLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred eeeeecCCCCCeEEecCeEEeeeCC
Confidence 55555432 2456666654
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.043 Score=55.06 Aligned_cols=145 Identities=10% Similarity=0.080 Sum_probs=81.3
Q ss_pred CceEEEEEcc--cCccccccCCCCCCCcccCeeEEEEeC---CCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeee
Q psy14906 433 SGHVDRFNIQ--SGAHRGSYGHDNQPGHVGGVRGVVSDN---LNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF 507 (583)
Q Consensus 433 dg~i~i~d~~--~~~~~~~~~~~~~~~h~~~v~~~~~s~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~ 507 (583)
-|.+.+|++. .|+....+...........+.-+.|.| +.-++..+-.++.+++..+.......++. |...+..
T Consensus 152 vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~~l~rs--Hs~~~~d 229 (1283)
T KOG1916|consen 152 VGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALRSLFRS--HSQRVTD 229 (1283)
T ss_pred hhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHHHHHHh--cCCCccc
Confidence 3667788765 444433331111122233344455544 55677777788888887776542222222 2222222
Q ss_pred E-----------EeccCCcEEEEEeCCceEEEEEcc-----ccceEEeeccccc-ceeeEEecCC-------C--cEEEE
Q psy14906 508 F-----------RTHQESSMLAVCLDDFTVNIIDID-----TCTIIRKLSGHMG-QLTDADFSPD-------S--RWLIT 561 (583)
Q Consensus 508 ~-----------~~s~~~~~l~~~~~dg~i~i~d~~-----~~~~~~~~~~h~~-~v~~l~~s~d-------~--~~l~s 561 (583)
+ ..||||..+|.+..||.+++|.+. .-+++...+.|.+ +-.|.-|..+ + .++++
T Consensus 230 ~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~It 309 (1283)
T KOG1916|consen 230 MAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRIT 309 (1283)
T ss_pred HHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEe
Confidence 2 379999999999999988888663 2344555666663 2222223321 1 23444
Q ss_pred Ee-CCCeEEEEeCCCcccc
Q psy14906 562 AS-MDCTIRVWDIPSSQLI 579 (583)
Q Consensus 562 ~~-~d~~i~vw~~~~~~~~ 579 (583)
++ ....+++|.-..-+|+
T Consensus 310 ttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 310 TTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred cccCCcceeEeeccchhhh
Confidence 43 4457999987776665
|
|
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.021 Score=53.10 Aligned_cols=240 Identities=9% Similarity=0.041 Sum_probs=139.1
Q ss_pred eeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccE
Q psy14906 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNI 377 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (583)
....|-|.+.+ ++.++.+..+..||-........ ..+.-+....+...|+..
T Consensus 38 i~~~w~~e~~n-lavaca~tiv~~YD~agq~~le~---------------------------n~tg~aldm~wDkegdvl 89 (615)
T KOG2247|consen 38 IIHRWRPEGHN-LAVACANTIVIYYDKAGQVILEL---------------------------NPTGKALDMAWDKEGDVL 89 (615)
T ss_pred ceeeEecCCCc-eehhhhhhHHHhhhhhcceeccc---------------------------CCchhHhhhhhccccchh
Confidence 44566764444 77777777888888554322211 112223344556677888
Q ss_pred EEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCC
Q psy14906 378 AAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPG 457 (583)
Q Consensus 378 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 457 (583)
++.....+.+.+|++............. ..-.-+.|++....++.+...|.+.+|+..+.+..... ..
T Consensus 90 avlAek~~piylwd~n~eytqqLE~gg~-------~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~-----Gk 157 (615)
T KOG2247|consen 90 AVLAEKTGPIYLWDVNSEYTQQLESGGT-------SSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVM-----GK 157 (615)
T ss_pred hhhhhcCCCeeechhhhhhHHHHhccCc-------chHHHHhhccCCccccccccccceEEEeccchhhhhhh-----cc
Confidence 8888889999999998765443322211 12223778999999999999999999999887777665 34
Q ss_pred cccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeE--------EeccCCcEEEEE-eCCceEEE
Q psy14906 458 HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFF--------RTHQESSMLAVC-LDDFTVNI 528 (583)
Q Consensus 458 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~--------~~s~~~~~l~~~-~~dg~i~i 528 (583)
|..+++++++.+.+. .+.++.|..+.+-...+. .....+..+....+ .|...|..+... +....+..
T Consensus 158 h~RRgtq~av~lEd~-vil~dcd~~L~v~~qege---ta~ltevggepdnm~~~y~k~n~w~kage~m~sVvsgKkhl~y 233 (615)
T KOG2247|consen 158 HQRRGTQIAVTLEDY-VILCDCDNTLSVTTQEGE---TASLTEVGGEPDNMDFFYGKVNGWGKAGETMVSVVSGKKHLMY 233 (615)
T ss_pred cccceeEEEecccce-eeecCcHHHHHHhhhccc---eeeeeeccCccchhhhheeeeeccccccceeeeeeecHHHHHH
Confidence 999999999998764 555666665554433332 22222222111111 122223333221 11111100
Q ss_pred EEc--cccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 529 IDI--DTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 529 ~d~--~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
-.+ ..++.-..++...+.+.|+.|--||.. .-+..-+.|..-.+.++++.+.|
T Consensus 234 ak~nE~D~pval~fq~~~gni~cyrwylDg~i-~igf~ag~iV~iS~h~aeLgaef 288 (615)
T KOG2247|consen 234 AKYNELDEPVALQFQEKYGNIHCYRWYLDGYI-LIGFDAGYIVSISAHNAELGAEF 288 (615)
T ss_pred HhhcCCCCccceEeeecCCceeEEEEeccccc-cccccceeEEEEeccchHHHHHH
Confidence 011 111111245555677888999888754 44555666777777777776543
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=94.51 E-value=0.22 Score=29.21 Aligned_cols=31 Identities=13% Similarity=0.187 Sum_probs=26.1
Q ss_pred cceEEEeeCCCC---CEEEEEecCCeEEEEEccC
Q psy14906 163 SCVNVLEPSPVV---DIIGVGLSNKKIILHNILT 193 (583)
Q Consensus 163 ~~i~~~~~s~~~---~~l~~~~~d~~i~iw~~~~ 193 (583)
+.|+++.|||+. ++|+.+-..|.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 468999999854 5888888889999999985
|
It contains a characteristic DLL sequence motif. |
| >KOG1916|consensus | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.02 Score=57.19 Aligned_cols=110 Identities=13% Similarity=0.171 Sum_probs=67.1
Q ss_pred ccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEE-----------EeCCCcEEEEeecCCcEEEEEcc
Q psy14906 421 THCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVV-----------SDNLNQIVISGGNDQTVKVWHFK 489 (583)
Q Consensus 421 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~-----------~s~~~~~l~s~~~dg~i~iwd~~ 489 (583)
-++..++.++..++.+++........ ..+ .+|...++.++ .+|||+.++.++.||.++.|.+.
T Consensus 192 ~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~-----rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy 265 (1283)
T KOG1916|consen 192 AVNKVYICYGLKGGEIRLLNINRALR-SLF-----RSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY 265 (1283)
T ss_pred ccccceeeeccCCCceeEeeechHHH-HHH-----HhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence 34557788888899999887765444 222 45777766654 68999999999999999998765
Q ss_pred CCCC---CceEEeeccC--C-eeeEEeccC-------Cc--EEEEEe-CCceEEEEEccccceE
Q psy14906 490 QTGK---PPLRSIKLDN--G-ISFFRTHQE-------SS--MLAVCL-DDFTVNIIDIDTCTII 537 (583)
Q Consensus 490 ~~~~---~~~~~~~~~~--~-v~~~~~s~~-------~~--~l~~~~-~dg~i~i~d~~~~~~~ 537 (583)
-.+. +++...+.+. + +..+ +... +. ++++++ .+..+++|.....+++
T Consensus 266 i~g~~~~rclhewkphd~~p~vC~l-c~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 266 ITGKIVHRCLHEWKPHDKHPRVCWL-CHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred eeccccHhhhhccCCCCCCCceeee-eccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 3321 2233333222 2 2222 3221 11 333333 3457888887766665
|
|
| >TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain | Back alignment and domain information |
|---|
Probab=94.43 E-value=4.7 Score=38.35 Aligned_cols=62 Identities=15% Similarity=0.132 Sum_probs=33.9
Q ss_pred ceEEEEEecCCCEEEEEe-----------CCC-eEEEEEccCCCCCce--eeEEeccCCCCCeeEEEeeCCCCEEEEeeC
Q psy14906 250 VVTGAHFLYNEPLLVTSS-----------PDN-TLKLWIFDKADGNGR--LLRIREGHSAPPNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 250 ~v~~~~~~~~~~~l~s~~-----------~d~-~i~~w~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 315 (583)
....++|.++|+++++-. ..+ .|.++ +..++.++ ....+.........+++.+ ++ |+.++.
T Consensus 15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l--~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~-~G--lyV~~~ 89 (367)
T TIGR02604 15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILIL--EDADGDGKYDKSNVFAEELSMVTGLAVAV-GG--VYVATP 89 (367)
T ss_pred CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEE--EcCCCCCCcceeEEeecCCCCccceeEec-CC--EEEeCC
Confidence 456788999998776642 122 55555 33322222 2333433344567888875 56 444444
Q ss_pred C
Q psy14906 316 D 316 (583)
Q Consensus 316 d 316 (583)
.
T Consensus 90 ~ 90 (367)
T TIGR02604 90 P 90 (367)
T ss_pred C
Confidence 4
|
All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs. |
| >PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3 | Back alignment and domain information |
|---|
Probab=94.41 E-value=4.4 Score=37.94 Aligned_cols=194 Identities=15% Similarity=0.216 Sum_probs=106.6
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEee----CCCCCE--EEEEecC----CeEE
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEP----SPVVDI--IGVGLSN----KKII 187 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----s~~~~~--l~~~~~d----~~i~ 187 (583)
.|...+++....++-+.++|++ |+.++.+.. +.++.+.. .-.|+. ||+++.. .+|+
T Consensus 65 dp~kSlIigTdK~~GL~VYdL~-Gk~lq~~~~-------------Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~ 130 (381)
T PF02333_consen 65 DPAKSLIIGTDKKGGLYVYDLD-GKELQSLPV-------------GRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLR 130 (381)
T ss_dssp -GGG-EEEEEETTTEEEEEETT-S-EEEEE-S-------------S-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEE
T ss_pred CcccceEEEEeCCCCEEEEcCC-CcEEEeecC-------------CCcceeeeecceecCCceEEEEEEecCcCCCCeEE
Confidence 4556677777888889999987 455555541 22222221 112332 4555432 4699
Q ss_pred EEEccCC-ceeEEEec-------cCCCeEEEEEe--c-CCCCEEEEEcCCCcEEEEeCC---CC----eehhhhhhcccc
Q psy14906 188 LHNILTD-ESLMEFIQ-------TWGPVTALSFR--T-DGPPMMVSGSNTGHLTVWNLE---DR----QVENQIKKAHRK 249 (583)
Q Consensus 188 iw~~~~~-~~~~~~~~-------~~~~v~~~~~~--~-~~~~~l~s~~~dg~i~vwd~~---~~----~~~~~~~~~~~~ 249 (583)
+|.+... ..+..+.. ....++.+++- | +|..+++....+|.+..|.+. ++ ++++++ .-..
T Consensus 131 ~f~id~~~g~L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f--~~~s 208 (381)
T PF02333_consen 131 LFRIDPDTGELTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREF--KVGS 208 (381)
T ss_dssp EEEEETTTTEEEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEE--E-SS
T ss_pred EEEecCCCCcceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEe--cCCC
Confidence 9987631 22333321 12346777764 3 456567778888988888764 23 456666 2345
Q ss_pred ceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC-ceeeEEecc--CCCCCeeEEEeeC-CC-CE-EEEeeCCCcEEEEE
Q psy14906 250 VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN-GRLLRIREG--HSAPPNYIQFYGN-SS-DN-ILSAAGDSTLRIFN 323 (583)
Q Consensus 250 ~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~-~~~~~~~~~--~~~~v~~~~~~~~-~~-~~-l~~~~~dg~i~iwd 323 (583)
.+-.+........|+.+-++.-|.-|+.+..... ...+....+ ....|..++.... ++ .+ |++.-.+++..+|+
T Consensus 209 Q~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~ 288 (381)
T PF02333_consen 209 QPEGCVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYD 288 (381)
T ss_dssp -EEEEEEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEE
T ss_pred cceEEEEecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEe
Confidence 7888888888889999988865544544433322 233333322 4567788887642 22 34 44444578899999
Q ss_pred cccc
Q psy14906 324 TKSE 327 (583)
Q Consensus 324 ~~~~ 327 (583)
.+..
T Consensus 289 r~~~ 292 (381)
T PF02333_consen 289 REGP 292 (381)
T ss_dssp SSTT
T ss_pred cCCC
Confidence 8753
|
1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A. |
| >COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.95 Score=42.89 Aligned_cols=144 Identities=12% Similarity=0.129 Sum_probs=90.2
Q ss_pred ccCCcEEEE-EecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC--------cEEEEeecCCcEEEEEccCC
Q psy14906 421 THCGNFVLI-GYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN--------QIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 421 s~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~--------~~l~s~~~dg~i~iwd~~~~ 491 (583)
..|..+++. |.....++-.|++.|+.+..+ .-|..- -+.|.|.. +.|+-.+ +..|.-.|.+-.
T Consensus 476 ~~dssli~~dg~~~~kLykmDIErGkvveeW-----~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS-~~svFrIDPR~~ 547 (776)
T COG5167 476 DNDSSLIYLDGGERDKLYKMDIERGKVVEEW-----DLKDDV--VVQYNPYFKFQQMTDEQTLVGLS-DYSVFRIDPRAR 547 (776)
T ss_pred cCCcceEEecCCCcccceeeecccceeeeEe-----ecCCcc--eeecCCchhHHhcCccceEEeec-ccceEEeccccc
Confidence 334444443 455567888888999988887 445443 56676653 3444444 444544455544
Q ss_pred CCCceEEeeccCCeeeEEecc----CCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCe
Q psy14906 492 GKPPLRSIKLDNGISFFRTHQ----ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCT 567 (583)
Q Consensus 492 ~~~~~~~~~~~~~v~~~~~s~----~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~ 567 (583)
+ ..+...+.....+.-.||. ...++|+++..|.|++||.-.-+....+++....|..+..+.+|+++++.+. ..
T Consensus 548 g-NKi~v~esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~y 625 (776)
T COG5167 548 G-NKIKVVESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK-NY 625 (776)
T ss_pred C-CceeeeeehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec-ce
Confidence 3 2233333222233333332 3459999999999999997654444567777889999999999999876664 45
Q ss_pred EEEEeCC
Q psy14906 568 IRVWDIP 574 (583)
Q Consensus 568 i~vw~~~ 574 (583)
+.+-|+.
T Consensus 626 llL~d~~ 632 (776)
T COG5167 626 LLLTDVP 632 (776)
T ss_pred EEEEecc
Confidence 6666653
|
|
| >PF14779 BBS1: Ciliary BBSome complex subunit 1 | Back alignment and domain information |
|---|
Probab=94.37 E-value=3.3 Score=36.23 Aligned_cols=73 Identities=12% Similarity=0.068 Sum_probs=49.9
Q ss_pred cCCcceEEEeeCC----C---CCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEe-cC-CCCEEEEEcCCCcEE
Q psy14906 160 RWNSCVNVLEPSP----V---VDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFR-TD-GPPMMVSGSNTGHLT 230 (583)
Q Consensus 160 ~~~~~i~~~~~s~----~---~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~-~~-~~~~l~s~~~dg~i~ 230 (583)
.....|+||+--. + -..|+.|.++|.|.|.|.+....+.++.-..-++.-.+.- -| ..+.++.+++||.|.
T Consensus 174 ~~~t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~il~~~~lpsvPv~i~~~G~~devdyRI~Va~Rdg~iy 253 (257)
T PF14779_consen 174 KRQTVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTILKQVQLPSVPVFISVSGQYDEVDYRIVVACRDGKIY 253 (257)
T ss_pred ccCceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhheeEEEEecCCCceEEEEEeeeeccceEEEEEeCCCEEE
Confidence 4456788887532 1 2478999999999999998888888777664444222221 12 444688899999887
Q ss_pred EE
Q psy14906 231 VW 232 (583)
Q Consensus 231 vw 232 (583)
+.
T Consensus 254 ~i 255 (257)
T PF14779_consen 254 TI 255 (257)
T ss_pred EE
Confidence 64
|
|
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=94.22 E-value=1.9 Score=33.02 Aligned_cols=118 Identities=9% Similarity=0.084 Sum_probs=70.9
Q ss_pred EEccCCcEEEEEecCceEEEEEcccCcccccc--CCCCCCCcccCeeEEEEeC-----CCcEEEEeecCCcEEEEEccCC
Q psy14906 419 YITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY--GHDNQPGHVGGVRGVVSDN-----LNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 419 ~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~~h~~~v~~~~~s~-----~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
.|......|++++.-|+|.|++.......... ....+-.-...|++++-.+ +...|+.|+. ..+..||+..+
T Consensus 5 kfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt~-t~llaYDV~~N 83 (136)
T PF14781_consen 5 KFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGTQ-TSLLAYDVENN 83 (136)
T ss_pred EeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEecc-ceEEEEEcccC
Confidence 44555567888888999999987644322110 0000013356678876544 2346666654 57999999988
Q ss_pred CCCceEEeeccCCeeeEEecc---CCcEEEEEeCCceEEEEEccccceEEe
Q psy14906 492 GKPPLRSIKLDNGISFFRTHQ---ESSMLAVCLDDFTVNIIDIDTCTIIRK 539 (583)
Q Consensus 492 ~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~i~i~d~~~~~~~~~ 539 (583)
.-+...+.+..+.++.+-. ...-|+..+.+..|.=||.+..+....
T Consensus 84 --~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWt 132 (136)
T PF14781_consen 84 --SDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWT 132 (136)
T ss_pred --chhhhhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEE
Confidence 6665556667788876643 223455555556777777665554443
|
|
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.23 Score=29.15 Aligned_cols=32 Identities=13% Similarity=0.316 Sum_probs=26.5
Q ss_pred CCeEEEEEecCCC--CEEEEEcCCCcEEEEeCCC
Q psy14906 205 GPVTALSFRTDGP--PMMVSGSNTGHLTVWNLED 236 (583)
Q Consensus 205 ~~v~~~~~~~~~~--~~l~s~~~dg~i~vwd~~~ 236 (583)
+.+.++.|+|+.. .+|+.+-..|.|.++|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 4689999997543 4888888889999999985
|
It contains a characteristic DLL sequence motif. |
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=94.00 E-value=2.9 Score=44.93 Aligned_cols=143 Identities=12% Similarity=0.169 Sum_probs=88.3
Q ss_pred ecCCeEEEEEccCCceeEEEeccCCCeEEEEE--------ecCCCCEEEEEcCCCcEEEEeCCCCe----e---hhhhh-
Q psy14906 181 LSNKKIILHNILTDESLMEFIQTWGPVTALSF--------RTDGPPMMVSGSNTGHLTVWNLEDRQ----V---ENQIK- 244 (583)
Q Consensus 181 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~--------~~~~~~~l~s~~~dg~i~vwd~~~~~----~---~~~~~- 244 (583)
+-|+.+.+|+.+++.....+.+-...|..+.. .|.=+++|+.++. -.|.++-+.-.+ . ...+.
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~-~ei~ilgV~~~~~~~~~~~f~~~~~i 174 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATP-VEIVILGVSFDEFTGELSIFNTSFKI 174 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEeccc-ceEEEEEEEeccccCcccccccceee
Confidence 46778999999998888877776666666643 3444445555543 346555432211 1 11110
Q ss_pred hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCc---e-e----------------eEEec-cCCCCCeeEEEe
Q psy14906 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNG---R-L----------------LRIRE-GHSAPPNYIQFY 303 (583)
Q Consensus 245 ~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~---~-~----------------~~~~~-~~~~~v~~~~~~ 303 (583)
......|.++....+|+.+++| .|| .+|.+-.....+ + + +..+. .+.++|..++..
T Consensus 175 ~~dg~~V~~I~~t~nGRIF~~G-~dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID 251 (1311)
T KOG1900|consen 175 SVDGVSVNCITYTENGRIFFAG-RDG--NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITID 251 (1311)
T ss_pred ecCCceEEEEEeccCCcEEEee-cCC--CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEec
Confidence 1124578889888889877766 566 566442211110 0 0 11122 567799999997
Q ss_pred eCCCCEEEEeeCCCcEEEEEccccc
Q psy14906 304 GNSSDNILSAAGDSTLRIFNTKSET 328 (583)
Q Consensus 304 ~~~~~~l~~~~~dg~i~iwd~~~~~ 328 (583)
. ..+.+.+-+..|++.+||+....
T Consensus 252 ~-SR~IlY~lsek~~v~~Y~i~~~G 275 (1311)
T KOG1900|consen 252 N-SRNILYVLSEKGTVSAYDIGGNG 275 (1311)
T ss_pred c-ccceeeeeccCceEEEEEccCCC
Confidence 3 67788899999999999998743
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.52 Score=40.60 Aligned_cols=81 Identities=16% Similarity=0.080 Sum_probs=53.0
Q ss_pred cEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEe-eccCCceE--EecccCCcceEEEeeCCCCCEEEEEecCCeEEEE
Q psy14906 113 PVHLILPFGPHLISVDEESNVKVWDIKAEETYLEL-SFDNDTFK--IMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILH 189 (583)
Q Consensus 113 ~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw 189 (583)
++..+..++++|++...+|.+++||+.+++.+..- .+.+--.. ..+......|..+.++.+|.-|++- .+|..+.|
T Consensus 14 ~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~l-sng~~y~y 92 (219)
T PF07569_consen 14 PVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTL-SNGDSYSY 92 (219)
T ss_pred ceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEE-eCCCEEEe
Confidence 55557788999999999999999999998765433 11100000 0001345678888888888766654 45778888
Q ss_pred EccCC
Q psy14906 190 NILTD 194 (583)
Q Consensus 190 ~~~~~ 194 (583)
+..-+
T Consensus 93 ~~~L~ 97 (219)
T PF07569_consen 93 SPDLG 97 (219)
T ss_pred ccccc
Confidence 76533
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.87 E-value=1.5 Score=40.98 Aligned_cols=110 Identities=10% Similarity=0.048 Sum_probs=64.0
Q ss_pred CCcEEEEEecCceEEEE-EcccCccccccC-CCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee
Q psy14906 423 CGNFVLIGYSSGHVDRF-NIQSGAHRGSYG-HDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK 500 (583)
Q Consensus 423 ~~~~l~~~~~dg~i~i~-d~~~~~~~~~~~-~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 500 (583)
.|.-+.++..||.|.-| |...+... .+. ...++-...++..+.-..+.+-+++-...|++..+..... +.+..-.
T Consensus 279 Gg~SLLv~~~dG~vsQWFdvr~~~~p-~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~--~~lL~~~ 355 (733)
T COG4590 279 GGFSLLVVHEDGLVSQWFDVRRDGQP-HLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSE--KLLLFER 355 (733)
T ss_pred CceeEEEEcCCCceeeeeeeecCCCC-cceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccC--cceehhh
Confidence 45567777788877765 44433221 110 0000111223333333334456778888888888776554 4443333
Q ss_pred ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccce
Q psy14906 501 LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI 536 (583)
Q Consensus 501 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 536 (583)
.-..+.-+++||.+.+|++- +.|.++++.+++..+
T Consensus 356 ~~~~~~~~~~Sp~~~~Ll~e-~~gki~~~~l~Nr~P 390 (733)
T COG4590 356 AYQAPQLVAMSPNQAYLLSE-DQGKIRLAQLENRNP 390 (733)
T ss_pred hhcCcceeeeCcccchheee-cCCceEEEEecCCCC
Confidence 33467888999999998874 346788888876543
|
|
| >PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins | Back alignment and domain information |
|---|
Probab=93.56 E-value=3.2 Score=40.43 Aligned_cols=140 Identities=11% Similarity=0.090 Sum_probs=61.6
Q ss_pred EEEeeCCeEEEEec-------CCcEEEeec-CCCCCCeEEEEeeCeEEEEEcCCeEEEEec-cc-------eeeeee---
Q psy14906 47 FVTCVGKAFHVYGC-------NHFKLLSVS-PQHEDDITCLSSDFFHIYTSANNIIYAWRR-GI-------DIVGTY--- 107 (583)
Q Consensus 47 i~~~~~~~i~v~d~-------~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~i~vw~~-~~-------~~~~~~--- 107 (583)
.....|+.+++|+. ++......+ .++...+.++ .++....|.|+.|+- .. ..+..+
T Consensus 40 Aw~~~d~~l~vW~Y~~~~~s~~~~~~~~~~~~~~~~~i~~v-----~lv~p~~G~v~f~~~I~~~l~~~t~~~i~l~gv~ 114 (422)
T PF08801_consen 40 AWIVVDNRLYVWNYSSTQSSPNDGSDFPLFDDGSSSSIPGV-----GLVKPKTGRVVFWESISHLLVLATPSQISLLGVS 114 (422)
T ss_dssp EEEEETTEEEEEE--SS--GG--EEEEE-----------SE-----EEEE-TT-EEEEES-TT-TT--EEEE--------
T ss_pred EEEEECCEEEEEeccCCCCCcCcccccceecCCCCCCCceE-----EEEEcCCCCEEecccchhhhhcCccccccccccc
Confidence 44447999999998 555555555 5555555444 455667899999983 21 111100
Q ss_pred ---cccCccEEEE---ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceE----------E---ecc--cC-Ccce
Q psy14906 108 ---KGHTSPVHLI---LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFK----------I---MGK--RW-NSCV 165 (583)
Q Consensus 108 ---~~h~~~v~~i---s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~----------~---~~~--~~-~~~i 165 (583)
--....+..+ .+.+ ++.+..+|.|.....+....+.++.+...... + ..+ .. ...|
T Consensus 115 ~~~l~~~e~~~~~~~~~~~~--~I~~ts~GRif~~~~~~~~g~~~l~y~~~~~~~~~i~~~~~~~~~~~~p~~~~~~~~I 192 (422)
T PF08801_consen 115 YSELLSGELSTSLTNVEPSG--FIVSTSTGRIFFLGIRDSNGKYELSYQQLSGRCSKINHTSSSIFSSLLPSFSDPRPKI 192 (422)
T ss_dssp ----------EEEEEEETTT--EEEEETT--EEEEEE-TTS-EEEEE-TT-----------------------------E
T ss_pred eeeecCCceEEECCCCceEE--EEEECCCCeEEEEeCCCCCCcEEEEEEcCcCCccccccccCceeccccCCcccchhce
Confidence 1111122222 3333 44445566666666555333333333211110 0 001 12 3449
Q ss_pred EEEeeCCCCCEEEEEecCCeEEEEEccC
Q psy14906 166 NVLEPSPVVDIIGVGLSNKKIILHNILT 193 (583)
Q Consensus 166 ~~~~~s~~~~~l~~~~~d~~i~iw~~~~ 193 (583)
..++..+..+.|.+.+.+|.|.+|++..
T Consensus 193 ~~v~~d~~r~~ly~l~~~~~Iq~w~l~~ 220 (422)
T PF08801_consen 193 VQVAVDPSRRLLYTLTSDGSIQVWDLGP 220 (422)
T ss_dssp EEEEEETTTTEEEEEESSE-EEEEEE-S
T ss_pred eeEEecCCcCEEEEEeCCCcEEEEEEeC
Confidence 9999999889999999999999999974
|
RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A. |
| >PF15390 DUF4613: Domain of unknown function (DUF4613) | Back alignment and domain information |
|---|
Probab=93.49 E-value=8.3 Score=37.84 Aligned_cols=152 Identities=13% Similarity=0.138 Sum_probs=86.3
Q ss_pred cceEEEeeCCCCCEEEEE-e--cCCeEEEEEccCCceeEEEeccCCCeEEEEEecC----CCCEEEEEcCCCcEEEEeCC
Q psy14906 163 SCVNVLEPSPVVDIIGVG-L--SNKKIILHNILTDESLMEFIQTWGPVTALSFRTD----GPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~-~--~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~~l~s~~~dg~i~vwd~~ 235 (583)
.++..++|. ||+.++-. - .+|.+++=|. +.+ +.-.-|..+.|.|- .+.+|| .-....|.||.+.
T Consensus 20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kfGds---~vi----GqFEhV~GlsW~P~~~~~~paLLA-VQHkkhVtVWqL~ 90 (671)
T PF15390_consen 20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKFGDS---KVI----GQFEHVHGLSWAPPCTADTPALLA-VQHKKHVTVWQLC 90 (671)
T ss_pred ccccceEec-CCCEEEEEeeeeeCCccccCCc---cEe----eccceeeeeeecCcccCCCCceEE-EeccceEEEEEec
Confidence 477889998 56555432 1 2333332221 122 33356889999885 332444 4456789999885
Q ss_pred C-----Ceehhhh----hhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC
Q psy14906 236 D-----RQVENQI----KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306 (583)
Q Consensus 236 ~-----~~~~~~~----~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 306 (583)
. ++.+... .....---..+.|+|....|+.-.....-.++++... ..+....+ ...+.|.|.+|.+ |
T Consensus 91 ~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d--~srVkaDi-~~~G~IhCACWT~-D 166 (671)
T PF15390_consen 91 PSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCD--SSRVKADI-KTSGLIHCACWTK-D 166 (671)
T ss_pred cCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeC--CceEEEec-cCCceEEEEEecC-c
Confidence 2 2222211 0011112245779999988877665554455655432 23333333 4467899999997 7
Q ss_pred CCEEEEee-CCCcEEEEEcccc
Q psy14906 307 SDNILSAA-GDSTLRIFNTKSE 327 (583)
Q Consensus 307 ~~~l~~~~-~dg~i~iwd~~~~ 327 (583)
|++|+.+- ..=.-++||-...
T Consensus 167 G~RLVVAvGSsLHSyiWd~~qK 188 (671)
T PF15390_consen 167 GQRLVVAVGSSLHSYIWDSAQK 188 (671)
T ss_pred CCEEEEEeCCeEEEEEecCchh
Confidence 87777653 3345678885443
|
|
| >PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3 | Back alignment and domain information |
|---|
Probab=93.48 E-value=6.7 Score=36.77 Aligned_cols=189 Identities=13% Similarity=0.075 Sum_probs=104.2
Q ss_pred EEEEeCC--CceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeE---EEEeeCe---EEEEEcC----CeEEEEeccc--
Q psy14906 36 ARFIRRR--KETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDIT---CLSSDFF---HIYTSAN----NIIYAWRRGI-- 101 (583)
Q Consensus 36 ~~~~p~~--~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~---~~~~~~~---~~~~~~~----~~i~vw~~~~-- 101 (583)
+=.+|.. +.++|.+...+-+.+||++...+...-.+....|- .+...++ +++++.. ..|++|.++.
T Consensus 59 IWvnp~dp~kSlIigTdK~~GL~VYdL~Gk~lq~~~~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~ 138 (381)
T PF02333_consen 59 IWVNPADPAKSLIIGTDKKGGLYVYDLDGKELQSLPVGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDT 138 (381)
T ss_dssp EE--SS-GGG-EEEEEETTTEEEEEETTS-EEEEE-SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTT
T ss_pred EecCCCCcccceEEEEeCCCCEEEEcCCCcEEEeecCCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCC
Confidence 3344533 34555565788899999886555443223322221 1222442 4555532 4799998642
Q ss_pred eeeeeecccCc-------cEE--EE--cc-CCC-EEEEEeCCCcEEEEEcC---CC----cEEEEeeccCCceEEecccC
Q psy14906 102 DIVGTYKGHTS-------PVH--LI--LP-FGP-HLISVDEESNVKVWDIK---AE----ETYLELSFDNDTFKIMGKRW 161 (583)
Q Consensus 102 ~~~~~~~~h~~-------~v~--~i--s~-~~~-~l~s~~~dg~i~iwd~~---~~----~~~~~~~~~~~~~~~~~~~~ 161 (583)
..+..+..... .+. |+ ++ +|+ |++....+|.+..|.+. .| +.++++. -
T Consensus 139 g~L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~------------~ 206 (381)
T PF02333_consen 139 GELTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFK------------V 206 (381)
T ss_dssp TEEEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-------------
T ss_pred CcceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEec------------C
Confidence 23343332211 233 34 44 455 56667888988888775 23 3455554 2
Q ss_pred CcceEEEeeCCCCCEEEEEecCCeEEEEEccCC-----ceeEEEe--ccCCCeEEEEEec--CCC-CEEEEEcCCCcEEE
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD-----ESLMEFI--QTWGPVTALSFRT--DGP-PMMVSGSNTGHLTV 231 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-----~~~~~~~--~~~~~v~~~~~~~--~~~-~~l~s~~~dg~i~v 231 (583)
...+..|+.......|..+-++.-|+-|+.+.. +.+.... +....|..|+.-. +++ |++++.-.+++..|
T Consensus 207 ~sQ~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~V 286 (381)
T PF02333_consen 207 GSQPEGCVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAV 286 (381)
T ss_dssp SS-EEEEEEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEE
T ss_pred CCcceEEEEecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEE
Confidence 457888999988889999999988888877522 2222222 2346788888754 443 46666666889999
Q ss_pred EeCCC
Q psy14906 232 WNLED 236 (583)
Q Consensus 232 wd~~~ 236 (583)
|+.+.
T Consensus 287 y~r~~ 291 (381)
T PF02333_consen 287 YDREG 291 (381)
T ss_dssp EESST
T ss_pred EecCC
Confidence 99874
|
1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A. |
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=93.46 E-value=6.1 Score=36.81 Aligned_cols=82 Identities=12% Similarity=0.107 Sum_probs=45.2
Q ss_pred ccceEEEEEecCCCEEEEEeCCCe------EEEEEccCCCCCceeeE-----EeccCCC--------CCeeEEEeeCCCC
Q psy14906 248 RKVVTGAHFLYNEPLLVTSSPDNT------LKLWIFDKADGNGRLLR-----IREGHSA--------PPNYIQFYGNSSD 308 (583)
Q Consensus 248 ~~~v~~~~~~~~~~~l~s~~~d~~------i~~w~~~~~~~~~~~~~-----~~~~~~~--------~v~~~~~~~~~~~ 308 (583)
-+.+..+.+.+++..+++.+.++. +..++++........+. .+....+ ..-++++. .++.
T Consensus 19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~-~~g~ 97 (326)
T PF13449_consen 19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVP-PDGS 97 (326)
T ss_pred cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEe-cCCC
Confidence 356788899876666777777777 55555544211111111 1111111 34477774 4777
Q ss_pred EEEEeeCC------CcEEEEEccccccce
Q psy14906 309 NILSAAGD------STLRIFNTKSETSNK 331 (583)
Q Consensus 309 ~l~~~~~d------g~i~iwd~~~~~~~~ 331 (583)
++++.-.+ ..|+.++.. +....
T Consensus 98 ~~is~E~~~~~~~~p~I~~~~~~-G~~~~ 125 (326)
T PF13449_consen 98 FWISSEGGRTGGIPPRIRRFDLD-GRVIR 125 (326)
T ss_pred EEEEeCCccCCCCCCEEEEECCC-Ccccc
Confidence 77776666 667777755 44433
|
|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=93.42 E-value=11 Score=39.15 Aligned_cols=78 Identities=21% Similarity=0.189 Sum_probs=51.3
Q ss_pred cEEEE--ccCCCEEEEEeCCCcEEEEEcCC----------Cc---EEEEeeccCCceEEecccCCcceEEEeeCCC---C
Q psy14906 113 PVHLI--LPFGPHLISVDEESNVKVWDIKA----------EE---TYLELSFDNDTFKIMGKRWNSCVNVLEPSPV---V 174 (583)
Q Consensus 113 ~v~~i--s~~~~~l~s~~~dg~i~iwd~~~----------~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---~ 174 (583)
.|..| +|+|++||-.|..| |.|-.+.. |+ ..+++......+. ......|..+.|+|. +
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~---~~~~~~i~qv~WhP~s~~~ 161 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFT---SNSSLEIKQVRWHPWSESD 161 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhcc---CCCCceEEEEEEcCCCCCC
Confidence 45555 89999999988755 44444421 11 1122322222221 255678999999996 5
Q ss_pred CEEEEEecCCeEEEEEccCC
Q psy14906 175 DIIGVGLSNKKIILHNILTD 194 (583)
Q Consensus 175 ~~l~~~~~d~~i~iw~~~~~ 194 (583)
..|++-..|+++++||+...
T Consensus 162 ~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 162 SHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CeEEEEecCCEEEEEecCCC
Confidence 78999999999999999754
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >PF13449 Phytase-like: Esterase-like activity of phytase | Back alignment and domain information |
|---|
Probab=93.42 E-value=5.8 Score=36.98 Aligned_cols=159 Identities=12% Similarity=0.095 Sum_probs=89.6
Q ss_pred CCceEEEEccCCcEEEEEecCce------EEEEEcccC-c---cccccCCCCCCCc--------ccCeeEEEEeCCCcEE
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGH------VDRFNIQSG-A---HRGSYGHDNQPGH--------VGGVRGVVSDNLNQIV 474 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~------i~i~d~~~~-~---~~~~~~~~~~~~h--------~~~v~~~~~s~~~~~l 474 (583)
+.+..+.+.+++..+++-+.+|. ++.+++... . .+.......+... .-...+|++.+++.++
T Consensus 20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~ 99 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW 99 (326)
T ss_pred CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence 56788999965555555566666 666655431 0 0000000000111 1145578888888888
Q ss_pred EEeecC------CcEEEEEccCCCCCceEEe----------------eccCCeeeEEeccCCcEEEEEeCC-----c--e
Q psy14906 475 ISGGND------QTVKVWHFKQTGKPPLRSI----------------KLDNGISFFRTHQESSMLAVCLDD-----F--T 525 (583)
Q Consensus 475 ~s~~~d------g~i~iwd~~~~~~~~~~~~----------------~~~~~v~~~~~s~~~~~l~~~~~d-----g--~ 525 (583)
++.-.+ ..|+.++.. + +....+ .......+++++|+|+.|+++.+. + .
T Consensus 100 is~E~~~~~~~~p~I~~~~~~-G--~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~ 176 (326)
T PF13449_consen 100 ISSEGGRTGGIPPRIRRFDLD-G--RVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRA 176 (326)
T ss_pred EEeCCccCCCCCCEEEEECCC-C--cccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccc
Confidence 877666 778888766 3 222222 223468899999999966665432 1 1
Q ss_pred -------EEE--EEccc-cceE----Eeecc-----cccceeeEEecCCCcEEEEE-----eCCCeEEEEeCC
Q psy14906 526 -------VNI--IDIDT-CTII----RKLSG-----HMGQLTDADFSPDSRWLITA-----SMDCTIRVWDIP 574 (583)
Q Consensus 526 -------i~i--~d~~~-~~~~----~~~~~-----h~~~v~~l~~s~d~~~l~s~-----~~d~~i~vw~~~ 574 (583)
+++ ||..+ ++.. ..+.. ....|..+.+-+++++|+-- +....++|+.+.
T Consensus 177 ~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v~ 249 (326)
T PF13449_consen 177 NPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRVD 249 (326)
T ss_pred ccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEEE
Confidence 444 45444 3222 22222 34678899999999877632 123455555443
|
|
| >PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins | Back alignment and domain information |
|---|
Probab=93.40 E-value=8.9 Score=37.96 Aligned_cols=151 Identities=17% Similarity=0.040 Sum_probs=77.2
Q ss_pred eCCeEEEEecCCcEEEeecCCCCCCe--EEEEeeCeEEEEEcCCeEEEEeccceeeeeecccCcc---EEE--EccCCCE
Q psy14906 51 VGKAFHVYGCNHFKLLSVSPQHEDDI--TCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSP---VHL--ILPFGPH 123 (583)
Q Consensus 51 ~~~~i~v~d~~~~~~~~~~~~h~~~v--~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~---v~~--is~~~~~ 123 (583)
......++| ..|.+...+....... .-...+|.++.+.. ..+..+|..|+.+..+.--.+. =+. .-|+|++
T Consensus 126 ~~~~~~~iD-~~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~-~~~~e~D~~G~v~~~~~l~~~~~~~HHD~~~l~nGn~ 203 (477)
T PF05935_consen 126 SSSYTYLID-NNGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG-NRLYEIDLLGKVIWEYDLPGGYYDFHHDIDELPNGNL 203 (477)
T ss_dssp BEEEEEEEE-TTS-EEEEE-GGGT--SSEEE-TTS-EEEEEB-TEEEEE-TT--EEEEEE--TTEE-B-S-EEE-TTS-E
T ss_pred CCceEEEEC-CCccEEEEEccCccccceeeEcCCCCEEEecC-CceEEEcCCCCEEEeeecCCcccccccccEECCCCCE
Confidence 455666777 4455555443222211 12223677777655 8899999888766655432211 112 2689998
Q ss_pred EEEEeC-------------CCcEEEEEcCCCcEEEEeeccCC--ceEE-----------e---cccCCcceEEEeeCC-C
Q psy14906 124 LISVDE-------------ESNVKVWDIKAEETYLELSFDND--TFKI-----------M---GKRWNSCVNVLEPSP-V 173 (583)
Q Consensus 124 l~s~~~-------------dg~i~iwd~~~~~~~~~~~~~~~--~~~~-----------~---~~~~~~~i~~~~~s~-~ 173 (583)
|+.+.. .-.|..+| .+|+.+....+... .... . +...--.+.++.+.+ +
T Consensus 204 L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~d 282 (477)
T PF05935_consen 204 LILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPSD 282 (477)
T ss_dssp EEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETTT
T ss_pred EEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCCC
Confidence 887772 23477777 88888887764421 1110 0 011124689999998 5
Q ss_pred CCEEEEEecCCeEEEEEccCCceeEEEeccC
Q psy14906 174 VDIIGVGLSNKKIILHNILTDESLMEFIQTW 204 (583)
Q Consensus 174 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~ 204 (583)
+.+|+++-.-..|...|.++++....+..+.
T Consensus 283 d~iivSsR~~s~V~~Id~~t~~i~Wilg~~~ 313 (477)
T PF05935_consen 283 DSIIVSSRHQSAVIKIDYRTGKIKWILGPPG 313 (477)
T ss_dssp TEEEEEETTT-EEEEEE-TTS-EEEEES-ST
T ss_pred CeEEEEcCcceEEEEEECCCCcEEEEeCCCC
Confidence 5555555555588899988998888887653
|
Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A. |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=93.39 E-value=11 Score=39.12 Aligned_cols=92 Identities=12% Similarity=0.089 Sum_probs=50.9
Q ss_pred CcceEEEeeCCCCCEEEEEecCCeEEEEEccC-CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeeh
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILT-DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE 240 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 240 (583)
.-.|..+.++|+|++||..+..| |.|..+.. ...-..+.+-...+.|= .+.+.. ..
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Cr--------------------t~~v~~--~~ 140 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCR--------------------TVPVDE--RF 140 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEE--------------------EEEech--hh
Confidence 45788999999999999988865 44544421 11111122211222221 122211 01
Q ss_pred hhhhhccccceEEEEEecC---CCEEEEEeCCCeEEEEEcc
Q psy14906 241 NQIKKAHRKVVTGAHFLYN---EPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 241 ~~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~~i~~w~~~ 278 (583)
+...+...|..+.|+|. +..|+.-..|+++|+||+.
T Consensus 141 --~~~~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~ 179 (717)
T PF10168_consen 141 --FTSNSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDIS 179 (717)
T ss_pred --ccCCCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecC
Confidence 11233456667777775 4677777778888888764
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >KOG1898|consensus | Back alignment and domain information |
|---|
Probab=93.15 E-value=13 Score=39.21 Aligned_cols=131 Identities=19% Similarity=0.193 Sum_probs=70.4
Q ss_pred CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc---CCeeeEE
Q psy14906 433 SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD---NGISFFR 509 (583)
Q Consensus 433 dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~~~~ 509 (583)
+|.++.|++-.......+... ..-.+.+. +..|-..++++| ....+++||+... ++++..+.. ..|+.+.
T Consensus 911 ~g~~ytyk~~~~g~~lellh~--T~~~~~v~--Ai~~f~~~~Lag-vG~~l~~YdlG~K--~lLRk~e~k~~p~~Is~iq 983 (1205)
T KOG1898|consen 911 SGFVYTYKFVRNGDKLELLHK--TEIPGPVG--AICPFQGRVLAG-VGRFLRLYDLGKK--KLLRKCELKFIPNRISSIQ 983 (1205)
T ss_pred CCceEEEEEEecCceeeeeec--cCCCccce--EEeccCCEEEEe-cccEEEEeeCChH--HHHhhhhhccCceEEEEEe
Confidence 456788876533322222000 12223333 445555544444 3468999999887 666554433 3555555
Q ss_pred eccCCcEEEEEeCCceEEEEEcc--ccceEEeecc--cccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 510 THQESSMLAVCLDDFTVNIIDID--TCTIIRKLSG--HMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 510 ~s~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~--h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
+ .+..+++|...-.+.++..+ ..+.+ .+.. -...|+++.+- |...+|.+..=|.+.+-.+.
T Consensus 984 t--~~~RI~VgD~qeSV~~~~y~~~~n~l~-~fadD~~pR~Vt~~~~l-D~~tvagaDrfGNi~~vR~P 1048 (1205)
T KOG1898|consen 984 T--YGARIVVGDIQESVHFVRYRREDNQLI-VFADDPVPRHVTALELL-DYDTVAGADRFGNIAVVRIP 1048 (1205)
T ss_pred e--cceEEEEeeccceEEEEEEecCCCeEE-EEeCCCccceeeEEEEe-cCCceeeccccCcEEEEECC
Confidence 5 46678888776666655443 33332 3322 22346666664 44456666666666655543
|
|
| >PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes | Back alignment and domain information |
|---|
Probab=93.06 E-value=1.9 Score=37.64 Aligned_cols=140 Identities=11% Similarity=0.075 Sum_probs=79.2
Q ss_pred EEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec-C--CcEEEEEccCCCCCce-----EEeeccCCeee
Q psy14906 436 VDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN-D--QTVKVWHFKQTGKPPL-----RSIKLDNGISF 507 (583)
Q Consensus 436 i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-d--g~i~iwd~~~~~~~~~-----~~~~~~~~v~~ 507 (583)
-.+||+.+++....- ........+-++-+||++|.+|+. + ..+++++.......+. ..+.....-..
T Consensus 48 s~~yD~~tn~~rpl~-----v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT 122 (243)
T PF07250_consen 48 SVEYDPNTNTFRPLT-----VQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPT 122 (243)
T ss_pred EEEEecCCCcEEecc-----CCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCcccc
Confidence 347888776654322 223334444567889999999874 2 3478887654110111 11223334555
Q ss_pred EEeccCCcEEEEEeCCc-eEEEEEcccc--ceEE--eecc-----cccceeeEEecCCCcEEEEEeCCCeEEEEeCCCcc
Q psy14906 508 FRTHQESSMLAVCLDDF-TVNIIDIDTC--TIIR--KLSG-----HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 508 ~~~s~~~~~l~~~~~dg-~i~i~d~~~~--~~~~--~~~~-----h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~ 577 (583)
...-|||+.|++|+... +..+|.-... .... .+.. ...----+...|||+.++.+..+. .|||..+++
T Consensus 123 ~~~L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s--~i~d~~~n~ 200 (243)
T PF07250_consen 123 ATTLPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS--IIYDYKTNT 200 (243)
T ss_pred ceECCCCCEEEEeCcCCCcccccCCccCCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc--EEEeCCCCe
Confidence 66678999999988774 3455554211 1111 1110 011112355678999998887664 567888887
Q ss_pred ccccc
Q psy14906 578 LIDCF 582 (583)
Q Consensus 578 ~~~~~ 582 (583)
.++.|
T Consensus 201 v~~~l 205 (243)
T PF07250_consen 201 VVRTL 205 (243)
T ss_pred EEeeC
Confidence 66544
|
Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium []. |
| >PF14761 HPS3_N: Hermansky-Pudlak syndrome 3 | Back alignment and domain information |
|---|
Probab=93.06 E-value=4.8 Score=33.94 Aligned_cols=149 Identities=14% Similarity=0.200 Sum_probs=85.2
Q ss_pred ceEEEEccCCcEEEEEecCceEEEEEcc--cCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCC------cEEEE
Q psy14906 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQ--SGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ------TVKVW 486 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg------~i~iw 486 (583)
...++-++. ..|+++.....|.+|++. ..+....+ .--+.|..+.++..|++|+|--.+. .+|+|
T Consensus 20 P~~~c~~g~-d~Lfva~~g~~Vev~~l~~~~~~~~~~F------~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y 92 (215)
T PF14761_consen 20 PTAVCCGGP-DALFVAASGCKVEVYDLEQEECPLLCTF------STVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAY 92 (215)
T ss_pred cceeeccCC-ceEEEEcCCCEEEEEEcccCCCceeEEE------cchhheeEEEeccccceEEEEEeecCCccceEEEEE
Confidence 444444443 344444677789999988 33344444 3448899999999999999875332 45664
Q ss_pred ---EccCCCCCce---------------------EEe--eccCCeeeEEeccCCcEEEEEeCCceEEEEEccccce-EE-
Q psy14906 487 ---HFKQTGKPPL---------------------RSI--KLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI-IR- 538 (583)
Q Consensus 487 ---d~~~~~~~~~---------------------~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-~~- 538 (583)
+.......++ ..+ ....++.+++..|-..-|++|+.+ .+.+|.+..... ..
T Consensus 93 ~NWr~~~~~~~~v~vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~~~-~l~lf~l~~~~~~~~~ 171 (215)
T PF14761_consen 93 FNWRSQKEENSPVRVRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGCGN-KLVLFTLKYQTIQSEK 171 (215)
T ss_pred EEhhhhcccCCcEEEEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEcCC-EEEEEEEEEEEEeccc
Confidence 3321111111 111 223467788888865556666554 788888764432 11
Q ss_pred ----eec-----cccc-ceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 539 ----KLS-----GHMG-QLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 539 ----~~~-----~h~~-~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
-+. -|.+ .+..++|. +.|+|..+ +-.+++..+.
T Consensus 172 ~~~lDFe~~l~~~~~~~~p~~v~ic--~~yiA~~s-~~ev~Vlkl~ 214 (215)
T PF14761_consen 172 FSFLDFERSLIDHIDNFKPTQVAIC--EGYIAVMS-DLEVLVLKLE 214 (215)
T ss_pred ccEEechhhhhheecCceEEEEEEE--eeEEEEec-CCEEEEEEEe
Confidence 111 1111 24455554 56888776 5567777653
|
|
| >PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others | Back alignment and domain information |
|---|
Probab=92.36 E-value=22 Score=39.88 Aligned_cols=383 Identities=11% Similarity=0.089 Sum_probs=174.9
Q ss_pred ccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeE
Q psy14906 109 GHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKI 186 (583)
Q Consensus 109 ~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i 186 (583)
.|-..++.+ +++|+++=. .|+.|+.||...++- ... + ......++.+.-.-||+..| .++.
T Consensus 360 aH~A~LTgv~~~~~ge~lRl--Hd~~LY~~d~~~~~W--k~~--~-------~~~d~~~S~Ls~qgdG~lYA---k~~~- 422 (1774)
T PF11725_consen 360 AHIAHLTGVHTDPDGEQLRL--HDDRLYQFDPNTARW--KPP--P-------DKSDTPFSSLSRQGDGKLYA---KDDD- 422 (1774)
T ss_pred HHHHHhhccccCCCCCeEEe--ecCceeeecccccee--cCC--C-------CcccchhhhhcccCCCceEe---cCCC-
Confidence 566667766 777776654 478888888776522 111 0 03345666666666666655 2221
Q ss_pred EEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe--------ehhhhhhccccceEEEEEec
Q psy14906 187 ILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ--------VENQIKKAHRKVVTGAHFLY 258 (583)
Q Consensus 187 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--------~~~~~~~~~~~~v~~~~~~~ 258 (583)
.+-|+..+..... .-..+.+...++++.--++++.....+.+|++.... ....+ .+-.....++.+++
T Consensus 423 ~l~nLSs~~~~~~---~v~~l~sfSv~~~g~vA~L~~~d~q~~qL~~m~~~~a~~~p~~~~~L~L-~dG~a~A~~VgLs~ 498 (1774)
T PF11725_consen 423 TLVNLSSGQMSEA---EVDKLKSFSVAPDGTVAMLTGKDGQTLQLHDMSPVDAPPTPRKTKTLQL-ADGKAQAQSVGLSN 498 (1774)
T ss_pred ceeecCCCCcchh---hhhhcccccccCCCceeeeecCCCcceeeeccCccccccCccceeeeec-cCCchhhhheeecC
Confidence 2344444432211 114566777889998336666666677999987531 11122 11223677788877
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEe---eCCCcEEEE--Eccccccceee
Q psy14906 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSA---AGDSTLRIF--NTKSETSNKNL 333 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~---~~dg~i~iw--d~~~~~~~~~~ 333 (583)
+ .|+.+..+|.++.=++.......-.+.....+......-.| .+...++| +.+|.+..- |-........+
T Consensus 499 d--rLFvADseGkLYsa~l~~~~~~~~~l~~~p~~~~~~~~~~~---G~~~~VtGF~~gd~G~lhAlikd~~GQ~Hs~aL 573 (1774)
T PF11725_consen 499 D--RLFVADSEGKLYSADLPAAQDNEPKLKLMPEPAYQLLGSAL---GGDHKVTGFISGDDGQLHALIKDRQGQRHSHAL 573 (1774)
T ss_pred C--eEEEEeCCCCEEecccccccCCCcceEeccccccccccccc---cccceeeccccCCCCeeeEEEeccCCceeeccc
Confidence 6 57788888866665443322211112211111100000011 11111211 122332211 10000000000
Q ss_pred ccchhhhhhhhhhcchhccccccCCCccceeee----ecccccccccEEEEecCCceEEEeecCcccccceee-eccccc
Q psy14906 334 GIASANRNNLKRKNRLEKMNEKFILPPVSQFSF----GLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFL-VPERCK 408 (583)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~ 408 (583)
... -......|...+.+.+..-..+.. ......+....-..+-.+|+|.-||-.+........ ....+.
T Consensus 574 de~------~~~~~pGWNLSd~Lvl~N~~GL~~~~~p~~~~~ldl~r~G~v~L~~G~i~~wD~ttq~W~~~~~kd~~~L~ 647 (1774)
T PF11725_consen 574 DEQ------GSQLQPGWNLSDALVLDNTRGLPKPPAPAPHEILDLGRAGLVGLQDGKIQYWDSTTQCWKDAGVKDIDQLK 647 (1774)
T ss_pred ccc------CCccCCCCcccceeEeeccCCCCCCCCCChHHhhccccccceeeccceEeeecCcchhhhhccCcCHHHHh
Confidence 000 000000111111111111111111 111112223344455567999999987766544433 111111
Q ss_pred ccC--------CCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecC
Q psy14906 409 QAK--------QSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGND 480 (583)
Q Consensus 409 ~~~--------~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 480 (583)
.+- .+.+..+.+++...-++-|...- +. +........+...........|++++.-.+ +.+++....
T Consensus 648 RG~D~~AYVLk~G~vk~l~i~~~~~~~~~g~~~~-~a---~~~~r~~~e~G~~l~Gl~~~~i~a~Avv~~-~~fvald~q 722 (1774)
T PF11725_consen 648 RGLDGNAYVLKDGKVKRLSINQEHPSIAHGDNNV-FA---LPQRRNKVELGDALEGLEDRVITAFAVVND-NKFVALDDQ 722 (1774)
T ss_pred ccccCCceEecCCceeeeecccCCCccccCCCcc-cc---cccccCCCCCCccccCCCcCcceeEEEEcC-CceEEeccC
Confidence 111 24555666665544444433221 11 111111111100000112556788887655 556777888
Q ss_pred CcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEE
Q psy14906 481 QTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIID 530 (583)
Q Consensus 481 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d 530 (583)
|.+.... ..+....+..-...+.|..+++....++.| -..+|.++--+
T Consensus 723 g~lt~h~-k~g~p~~l~~~gl~G~ik~l~lD~~~nL~A-lt~~G~Lf~~~ 770 (1774)
T PF11725_consen 723 GDLTAHQ-KPGRPVPLSRPGLSGEIKDLALDEKQNLYA-LTSTGELFRLP 770 (1774)
T ss_pred Ccccccc-CCCCCccCCCCCCCcchhheeeccccceeE-ecCCCceeecC
Confidence 9999888 544212222223457899999987755544 45666665543
|
It is an essential pathogenicity factor of approximately 198 kDa. Its injection into the host-plant is dependent upon the bacterial type III or Hrp secretion system []. The family is long and carries a number of predicted functional regions, including an ERMS or endoplasmic reticulum membrane retention signal at both the C- and the N-termini, a leucine-zipper motif from residues 539-560, and a nuclear localisation signal at 1358-1361. This conserved AvrE-family of effectors is among the few that are required for full virulence of many phytopathogenic pseudomonads, erwinias and pantoeas []. |
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=92.33 E-value=1.1 Score=38.59 Aligned_cols=78 Identities=12% Similarity=0.099 Sum_probs=56.3
Q ss_pred EeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEee-------c-------ccccceeeEEecCCCcEEEEEe
Q psy14906 498 SIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKL-------S-------GHMGQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 498 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~-------~h~~~v~~l~~s~d~~~l~s~~ 563 (583)
.+....++.. +..++.+|++-+.+|.+++||+.+++.+..- . .....|..+.++.+|.-|++-+
T Consensus 8 ~i~Lgs~~~~--l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls 85 (219)
T PF07569_consen 8 PIVLGSPVSF--LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS 85 (219)
T ss_pred cEecCCceEE--EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe
Confidence 3444444444 3457889999999999999999988765322 1 2456789999999998777765
Q ss_pred CCCeEEEEeCCCccc
Q psy14906 564 MDCTIRVWDIPSSQL 578 (583)
Q Consensus 564 ~d~~i~vw~~~~~~~ 578 (583)
+|..+.|+.+=+..
T Consensus 86 -ng~~y~y~~~L~~W 99 (219)
T PF07569_consen 86 -NGDSYSYSPDLGCW 99 (219)
T ss_pred -CCCEEEecccccee
Confidence 57789998765443
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >PLN00033 photosystem II stability/assembly factor; Provisional | Back alignment and domain information |
|---|
Probab=92.18 E-value=11 Score=36.00 Aligned_cols=140 Identities=10% Similarity=0.024 Sum_probs=80.0
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcEE-EEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc-
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEETY-LELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE- 195 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~- 195 (583)
+++|.+++.+.....++-|| .|+.. ..+.. .....+..+.+.+++..++++ ..|.+ ++....++
T Consensus 247 ~~dG~~~~vg~~G~~~~s~d--~G~~~W~~~~~----------~~~~~l~~v~~~~dg~l~l~g-~~G~l-~~S~d~G~~ 312 (398)
T PLN00033 247 SPDGDYVAVSSRGNFYLTWE--PGQPYWQPHNR----------ASARRIQNMGWRADGGLWLLT-RGGGL-YVSKGTGLT 312 (398)
T ss_pred cCCCCEEEEECCccEEEecC--CCCcceEEecC----------CCccceeeeeEcCCCCEEEEe-CCceE-EEecCCCCc
Confidence 67777777765433333344 23221 22221 345678999999999888766 55554 34444443
Q ss_pred ----eeEEEec--cCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhh--hccccceEEEEEecCCCEEEEEe
Q psy14906 196 ----SLMEFIQ--TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK--KAHRKVVTGAHFLYNEPLLVTSS 267 (583)
Q Consensus 196 ----~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~ 267 (583)
....... ....+..+.|.+++. . +.++..|.+.... ..++.-.... ..-....+.+.|.++++.+++|
T Consensus 313 ~~~~~f~~~~~~~~~~~l~~v~~~~d~~-~-~a~G~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G- 388 (398)
T PLN00033 313 EEDFDFEEADIKSRGFGILDVGYRSKKE-A-WAAGGSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG- 388 (398)
T ss_pred ccccceeecccCCCCcceEEEEEcCCCc-E-EEEECCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEEe-
Confidence 2222222 123588999998887 4 4555567666653 3343322221 2234578899998777766655
Q ss_pred CCCeEEEE
Q psy14906 268 PDNTLKLW 275 (583)
Q Consensus 268 ~d~~i~~w 275 (583)
.+|.|.-|
T Consensus 389 ~~G~il~~ 396 (398)
T PLN00033 389 NDGVLLRY 396 (398)
T ss_pred CCcEEEEe
Confidence 67876554
|
|
| >KOG2247|consensus | Back alignment and domain information |
|---|
Probab=91.99 E-value=0.023 Score=52.75 Aligned_cols=151 Identities=15% Similarity=0.213 Sum_probs=102.0
Q ss_pred CCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeeh
Q psy14906 161 WNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE 240 (583)
Q Consensus 161 ~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 240 (583)
+-.......|-|.+..++.++.+..+..||-. ++........ +....++|..+++.+++.+-..+.+.+||+.+.. .
T Consensus 33 alv~pi~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~n~t-g~aldm~wDkegdvlavlAek~~piylwd~n~ey-t 109 (615)
T KOG2247|consen 33 ALVGPIIHRWRPEGHNLAVACANTIVIYYDKA-GQVILELNPT-GKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEY-T 109 (615)
T ss_pred hccccceeeEecCCCceehhhhhhHHHhhhhh-cceecccCCc-hhHhhhhhccccchhhhhhhcCCCeeechhhhhh-H
Confidence 33344456677877778888888888889854 5555544444 6677889998888666777788999999998543 2
Q ss_pred hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEE
Q psy14906 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLR 320 (583)
Q Consensus 241 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 320 (583)
.++..+-...-.-+.|++.+..++.+-..+.+.+++-. ..+.......|...+.++++.+. ++.+.++.|..+.
T Consensus 110 qqLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhg----tsR~iiv~Gkh~RRgtq~av~lE--d~vil~dcd~~L~ 183 (615)
T KOG2247|consen 110 QQLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHG----TSRRIIVMGKHQRRGTQIAVTLE--DYVILCDCDNTLS 183 (615)
T ss_pred HHHhccCcchHHHHhhccCCccccccccccceEEEecc----chhhhhhhcccccceeEEEeccc--ceeeecCcHHHHH
Confidence 33322222222237899998889999889999999543 23334444448889999999863 3555555554443
|
|
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=91.96 E-value=0.63 Score=47.19 Aligned_cols=70 Identities=23% Similarity=0.341 Sum_probs=43.3
Q ss_pred cCCcEEEEEeCCceEEEEEccc----cceEEe-----------ec-----------ccccceeeEEecC----CCcEEEE
Q psy14906 512 QESSMLAVCLDDFTVNIIDIDT----CTIIRK-----------LS-----------GHMGQLTDADFSP----DSRWLIT 561 (583)
Q Consensus 512 ~~~~~l~~~~~dg~i~i~d~~~----~~~~~~-----------~~-----------~h~~~v~~l~~s~----d~~~l~s 561 (583)
++...++++..||.+....... +..... +. ........++++. +..+|++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t 235 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT 235 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence 3566777777888777776653 211111 00 0123455566666 7789999
Q ss_pred EeCCCeEEEEeCCCcccccc
Q psy14906 562 ASMDCTIRVWDIPSSQLIDC 581 (583)
Q Consensus 562 ~~~d~~i~vw~~~~~~~~~~ 581 (583)
.+.|+++|+||+.+++++.+
T Consensus 236 l~~D~~LRiW~l~t~~~~~~ 255 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQCLAT 255 (547)
T ss_dssp EETTSEEEEEETTTTCEEEE
T ss_pred EeCCCeEEEEECCCCeEEEE
Confidence 99999999999999999664
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118 | Back alignment and domain information |
|---|
Probab=91.82 E-value=9.2 Score=34.23 Aligned_cols=75 Identities=17% Similarity=0.139 Sum_probs=54.8
Q ss_pred eecCCcEEEEEccCCCCCceEEeeccC---CeeeEEecc------CCcEEEEEeCCceEEEEEccccceEEeecccc---
Q psy14906 477 GGNDQTVKVWHFKQTGKPPLRSIKLDN---GISFFRTHQ------ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM--- 544 (583)
Q Consensus 477 ~~~dg~i~iwd~~~~~~~~~~~~~~~~---~v~~~~~s~------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~--- 544 (583)
+..-|.|-++|+.. .+++.+.... ..+.|+..| .|.+|+--..||+|..||..+++.+..+....
T Consensus 218 G~G~G~VdvFd~~G---~l~~r~as~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~p 294 (336)
T TIGR03118 218 GAGLGYVNVFTLNG---QLLRRVASSGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHP 294 (336)
T ss_pred CCCcceEEEEcCCC---cEEEEeccCCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCe
Confidence 34457899999876 5666665543 556677755 56788887889999999999999887776543
Q ss_pred ---cceeeEEecC
Q psy14906 545 ---GQLTDADFSP 554 (583)
Q Consensus 545 ---~~v~~l~~s~ 554 (583)
..++.|+|-.
T Consensus 295 i~i~GLWgL~fGn 307 (336)
T TIGR03118 295 VKVDGLWSLTFGN 307 (336)
T ss_pred EEecCeEEeeeCC
Confidence 3467788855
|
This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus. |
| >COG1520 FOG: WD40-like repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=91.29 E-value=8.6 Score=36.71 Aligned_cols=147 Identities=15% Similarity=0.110 Sum_probs=81.0
Q ss_pred cEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccC-
Q psy14906 425 NFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN- 503 (583)
Q Consensus 425 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~- 503 (583)
..++++..+|.|.-+|..++..+...... .....+..-.+..+|+ ++.++.++.+..+|..++ +.+.......
T Consensus 69 g~v~~~~~~G~i~A~d~~~g~~~W~~~~~---~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G--~~~W~~~~~~~ 142 (370)
T COG1520 69 GTVYVGTRDGNIFALNPDTGLVKWSYPLL---GAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTG--TLVWSRNVGGS 142 (370)
T ss_pred CeEEEecCCCcEEEEeCCCCcEEecccCc---CcceeccCceEEeCCe-EEEecccceEEEEECCCC--cEEEEEecCCC
Confidence 45555678888888898888865443211 1112333333333676 677778888888888777 7777766665
Q ss_pred -CeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccc---cceeeEEecCCCcEEEEEeC--CCeEEEEeCCCcc
Q psy14906 504 -GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM---GQLTDADFSPDSRWLITASM--DCTIRVWDIPSSQ 577 (583)
Q Consensus 504 -~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~---~~v~~l~~s~d~~~l~s~~~--d~~i~vw~~~~~~ 577 (583)
.+..-..-.++ .+..++.++.+.-.|..+|+......... ..+..--...++. +..+.. ++.+.-.|+.+|+
T Consensus 143 ~~~~~~~v~~~~-~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~-vy~~~~~~~~~~~a~~~~~G~ 220 (370)
T COG1520 143 PYYASPPVVGDG-TVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIASGT-VYVGSDGYDGILYALNAEDGT 220 (370)
T ss_pred eEEecCcEEcCc-EEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceeecce-EEEecCCCcceEEEEEccCCc
Confidence 11111222233 33334477888888888888765543221 1111111122333 333333 4556666666665
Q ss_pred cc
Q psy14906 578 LI 579 (583)
Q Consensus 578 ~~ 579 (583)
..
T Consensus 221 ~~ 222 (370)
T COG1520 221 LK 222 (370)
T ss_pred Ee
Confidence 54
|
|
| >KOG1900|consensus | Back alignment and domain information |
|---|
Probab=91.21 E-value=8.4 Score=41.67 Aligned_cols=136 Identities=13% Similarity=0.230 Sum_probs=84.9
Q ss_pred CCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEee--------CCCCCEEEEEecCCeEEEEEccCCcee---
Q psy14906 129 EESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEP--------SPVVDIIGVGLSNKKIILHNILTDESL--- 197 (583)
Q Consensus 129 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--------s~~~~~l~~~~~d~~i~iw~~~~~~~~--- 197 (583)
.|+.+.+|+++++.....+. +....|..+.+ -|.=++|++-..--.|.++-+.-.+..
T Consensus 97 iDn~L~lWny~~~~e~~~~d-----------~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~ 165 (1311)
T KOG1900|consen 97 IDNNLFLWNYESDNELAEYD-----------GLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGEL 165 (1311)
T ss_pred eCCeEEEEEcCCCCcccccc-----------chhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcc
Confidence 48899999999977666665 44555555543 333344444444456777655322111
Q ss_pred ------EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC----CCC---e--------------e---hhhhhhcc
Q psy14906 198 ------MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL----EDR---Q--------------V---ENQIKKAH 247 (583)
Q Consensus 198 ------~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~----~~~---~--------------~---~~~~~~~~ 247 (583)
..+......|+++....+|+ ++++ +.|| .+|.+ .++ + . +..+...+
T Consensus 166 ~~f~~~~~i~~dg~~V~~I~~t~nGR-IF~~-G~dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~ 241 (1311)
T KOG1900|consen 166 SIFNTSFKISVDGVSVNCITYTENGR-IFFA-GRDG--NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSS 241 (1311)
T ss_pred cccccceeeecCCceEEEEEeccCCc-EEEe-ecCC--CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCC
Confidence 12223346789999888997 5554 4566 44433 211 1 0 11121256
Q ss_pred ccceEEEEEecCCCEEEEEeCCCeEEEEEccC
Q psy14906 248 RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279 (583)
Q Consensus 248 ~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~ 279 (583)
.++|..++.....+.+.+-+..+++.+|++..
T Consensus 242 ~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 242 KDPIRQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred CCcceeeEeccccceeeeeccCceEEEEEccC
Confidence 77999999988888999999999999998754
|
|
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
Probab=91.12 E-value=15 Score=35.23 Aligned_cols=65 Identities=9% Similarity=0.087 Sum_probs=34.5
Q ss_pred ccCCcEEEEEeCCc----------------------eEEEEEccccce--EEeecccccceeeEEecCCCcEEEEEeCCC
Q psy14906 511 HQESSMLAVCLDDF----------------------TVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWLITASMDC 566 (583)
Q Consensus 511 s~~~~~l~~~~~dg----------------------~i~i~d~~~~~~--~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~ 566 (583)
..++++++.|+.+. .+.+||.++.+- +..+....... .+..-++++++.|+...
T Consensus 277 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~~W~~~~~lp~~r~~~--~av~~~~~iyv~GG~~~ 354 (376)
T PRK14131 277 YSNGVLLVAGGANFPGARENYQNGKLYAHEGLKKSWSDEIYALVNGKWQKVGELPQGLAYG--VSVSWNNGVLLIGGETA 354 (376)
T ss_pred eECCEEEEeeccCCCCChhhhhcCCcccccCCcceeehheEEecCCcccccCcCCCCccce--EEEEeCCEEEEEcCCCC
Confidence 35677788877531 356788876542 22222111111 23334677778777532
Q ss_pred ------eEEEEeCCCcc
Q psy14906 567 ------TIRVWDIPSSQ 577 (583)
Q Consensus 567 ------~i~vw~~~~~~ 577 (583)
.|..++.+++.
T Consensus 355 ~~~~~~~v~~~~~~~~~ 371 (376)
T PRK14131 355 GGKAVSDVTLLSWDGKK 371 (376)
T ss_pred CCcEeeeEEEEEEcCCE
Confidence 56666665543
|
|
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=91.00 E-value=1.3 Score=25.89 Aligned_cols=40 Identities=23% Similarity=0.203 Sum_probs=28.0
Q ss_pred cCCcEEEEEe-CCceEEEEEccccceEEeecccccceeeEEe
Q psy14906 512 QESSMLAVCL-DDFTVNIIDIDTCTIIRKLSGHMGQLTDADF 552 (583)
Q Consensus 512 ~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~ 552 (583)
|+++.|+++. .+++|.++|..+++.+..+.. ......+.|
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v-g~~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV-GGYPFGVAV 41 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC-CCCCceEEe
Confidence 5777666655 578999999999988877765 233444544
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=90.86 E-value=1.1 Score=25.89 Aligned_cols=33 Identities=12% Similarity=0.336 Sum_probs=23.3
Q ss_pred EeccCCCeEEEEEecCCCCEEEEEcCC--CcEEEE
Q psy14906 200 FIQTWGPVTALSFRTDGPPMMVSGSNT--GHLTVW 232 (583)
Q Consensus 200 ~~~~~~~v~~~~~~~~~~~~l~s~~~d--g~i~vw 232 (583)
+......-....|+|||+.++++...+ |.-.||
T Consensus 4 ~t~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 4 LTNSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp ES-SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred cccCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 334446778889999999777777777 777666
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
Probab=90.48 E-value=13 Score=34.74 Aligned_cols=109 Identities=10% Similarity=0.066 Sum_probs=54.2
Q ss_pred CCcEEEEEecC-----ceEEEEEcccCccc---cccCCCCCCCcccCeeEEEEeCCCcEEEEeecC-----CcEEEEEcc
Q psy14906 423 CGNFVLIGYSS-----GHVDRFNIQSGAHR---GSYGHDNQPGHVGGVRGVVSDNLNQIVISGGND-----QTVKVWHFK 489 (583)
Q Consensus 423 ~~~~l~~~~~d-----g~i~i~d~~~~~~~---~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~ 489 (583)
++.++++|+.+ ..+..||+.+.+.. ..+... ....... +++. -++++.+.|+.. ..+..||+.
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~l--p~~~~~~-~~~~-~~~~iYv~GG~~~~~~~~~v~~yd~~ 147 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNL--PFTFENG-SACY-KDGTLYVGGGNRNGKPSNKSYLFNLE 147 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCC--CcCccCc-eEEE-ECCEEEEEeCcCCCccCceEEEEcCC
Confidence 45666666643 35777777665531 122111 1111111 2222 256666766642 357788887
Q ss_pred CCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCc----eEEEEEccccc
Q psy14906 490 QTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDF----TVNIIDIDTCT 535 (583)
Q Consensus 490 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg----~i~i~d~~~~~ 535 (583)
+..-..+..+.........+...++++.+.|+.++ .+..||.++.+
T Consensus 148 ~~~W~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~ 197 (323)
T TIGR03548 148 TQEWFELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQ 197 (323)
T ss_pred CCCeeECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCe
Confidence 66222222122112222333345677888887653 35688887654
|
Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat. |
| >PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[] | Back alignment and domain information |
|---|
Probab=89.92 E-value=29 Score=36.76 Aligned_cols=67 Identities=13% Similarity=0.160 Sum_probs=50.8
Q ss_pred CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEee----cc---------------cccceeeEEecCCCcEEEEEe
Q psy14906 503 NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKL----SG---------------HMGQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 503 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----~~---------------h~~~v~~l~~s~d~~~l~s~~ 563 (583)
+.|.++....-+.+++....||+|.++|..+.+.+... .. +-..+..++|||.+.-++.-.
T Consensus 260 ~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~ 339 (753)
T PF11635_consen 260 KRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQID 339 (753)
T ss_pred CeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEe
Confidence 45777777777889999999999999999887655433 10 112344588999999999999
Q ss_pred CCCeEE
Q psy14906 564 MDCTIR 569 (583)
Q Consensus 564 ~d~~i~ 569 (583)
.+|.+.
T Consensus 340 ~~~~~~ 345 (753)
T PF11635_consen 340 EDGKTK 345 (753)
T ss_pred cCCCce
Confidence 999855
|
It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM. |
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=89.39 E-value=1.5 Score=25.69 Aligned_cols=32 Identities=9% Similarity=0.093 Sum_probs=25.2
Q ss_pred eCCCceEEEEeeCCeEEEEecCCcEEEeecCC
Q psy14906 40 RRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQ 71 (583)
Q Consensus 40 p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~ 71 (583)
|+++..+++.-.++.|.++|+++++.+..+..
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 56677666666889999999999988877654
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=89.36 E-value=7 Score=37.60 Aligned_cols=81 Identities=10% Similarity=0.025 Sum_probs=54.4
Q ss_pred cceEEEeeCCCCCEEEEEecCCeEEEEEc---------cCCceeEEEe-----------ccCCCeEEEEEecCC--CCEE
Q psy14906 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNI---------LTDESLMEFI-----------QTWGPVTALSFRTDG--PPMM 220 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~~~d~~i~iw~~---------~~~~~~~~~~-----------~~~~~v~~~~~~~~~--~~~l 220 (583)
-.|..+..++.|..++..+.+|.+.++=. +.|+.....+ ...-.+..++|+|+. ...|
T Consensus 104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL 183 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHL 183 (741)
T ss_pred EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceE
Confidence 35777888999999999999886554431 2333221111 111356778999986 4467
Q ss_pred EEEcCCCcEEEEeCCCCeehhhh
Q psy14906 221 VSGSNTGHLTVWNLEDRQVENQI 243 (583)
Q Consensus 221 ~s~~~dg~i~vwd~~~~~~~~~~ 243 (583)
..-+.|..+|+||+.....+...
T Consensus 184 ~iL~sdnviRiy~lS~~telylq 206 (741)
T KOG4460|consen 184 VLLTSDNVIRIYSLSEPTELYLQ 206 (741)
T ss_pred EEEecCcEEEEEecCCcchhhcc
Confidence 77888999999999876655443
|
|
| >COG1520 FOG: WD40-like repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=89.10 E-value=21 Score=34.04 Aligned_cols=190 Identities=11% Similarity=0.004 Sum_probs=108.2
Q ss_pred CCceEEEEeeCCeEEEEecCCcEEEeecCCCC--CCeEE--EEeeCeEEEEEcCCeEEEEec-cceeeeeecccCc-cEE
Q psy14906 42 RKETLFVTCVGKAFHVYGCNHFKLLSVSPQHE--DDITC--LSSDFFHIYTSANNIIYAWRR-GIDIVGTYKGHTS-PVH 115 (583)
Q Consensus 42 ~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~--~~v~~--~~~~~~~~~~~~~~~i~vw~~-~~~~~~~~~~h~~-~v~ 115 (583)
.+..+.+...++.|.-.|.++++.+-....-. ..+.. +.-+|++.+++.++.+...|. +++.+-....... .+.
T Consensus 67 ~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~ 146 (370)
T COG1520 67 GDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYA 146 (370)
T ss_pred eCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCeEEEecccceEEEEECCCCcEEEEEecCCCeEEe
Confidence 34555555678888888999888764332211 11111 111789999999998888887 6776666665551 111
Q ss_pred E-EccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCC-ceEEecccCCcceEEEeeCCCCCEEEEEec--CCeEEEEEc
Q psy14906 116 L-ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDND-TFKIMGKRWNSCVNVLEPSPVVDIIGVGLS--NKKIILHNI 191 (583)
Q Consensus 116 ~-is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--d~~i~iw~~ 191 (583)
. .......+..++.++.+...|..+|+.+........ ... ....++ . ....+..+.. ++.+.-.|.
T Consensus 147 ~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~----~~~~~~-----~-~~~~vy~~~~~~~~~~~a~~~ 216 (370)
T COG1520 147 SPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLS----IYGSPA-----I-ASGTVYVGSDGYDGILYALNA 216 (370)
T ss_pred cCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccc----cccCce-----e-ecceEEEecCCCcceEEEEEc
Confidence 1 122233344444689999999999998887664321 110 111111 1 2234444444 566777788
Q ss_pred cCCceeEEEeccC----CCe------EEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhh
Q psy14906 192 LTDESLMEFIQTW----GPV------TALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI 243 (583)
Q Consensus 192 ~~~~~~~~~~~~~----~~v------~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 243 (583)
.+|........+. ..+ ..-...-++. ++.++.++.+...|..+++.+...
T Consensus 217 ~~G~~~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--~~~~~~~g~~~~l~~~~G~~~W~~ 276 (370)
T COG1520 217 EDGTLKWSQKVSQTIGRTAISTTPAVDGGPVYVDGG--VYAGSYGGKLLCLDADTGELIWSF 276 (370)
T ss_pred cCCcEeeeeeeecccCcccccccccccCceEEECCc--EEEEecCCeEEEEEcCCCceEEEE
Confidence 8888777643210 111 0001111222 456666777888888888887776
|
|
| >PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A | Back alignment and domain information |
|---|
Probab=89.07 E-value=27 Score=35.12 Aligned_cols=87 Identities=11% Similarity=0.163 Sum_probs=47.1
Q ss_pred EEEEEeCCCcEEEEEcC--CCcEEEE-----eeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccC--
Q psy14906 123 HLISVDEESNVKVWDIK--AEETYLE-----LSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILT-- 193 (583)
Q Consensus 123 ~l~s~~~dg~i~iwd~~--~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~-- 193 (583)
+|+.+..+|.+.+-.+. +.+.... ..+.... ......-..++.+|.|+.++.+..++.+.++.++.
T Consensus 2 ~L~v~tdsg~l~~l~~~~~~~~~~~~~v~~~~~~~~~~-----~r~~~~G~~l~vDP~~R~i~v~a~e~~~~v~~l~~~~ 76 (504)
T PF10433_consen 2 SLVVTTDSGKLSILEYDPSTHGFFKEFVHQWEPLSKSG-----SRLSQPGQYLAVDPSGRCIAVSAYEGNFLVYPLNRSL 76 (504)
T ss_dssp EEEEEETTTEEEEEEEEEETTEE-E-EEEEEEE---SS-----SEB-TT--EEEE-TTSSEEEEEEBTTEEEEEE-SS--
T ss_pred EEEEEECCCCEEEEEEECCCCccceeeEEEeEecCCCC-----CChhcCCcEEEECCcCCEEEEEecCCeEEEEEecccc
Confidence 56667777776654443 3332211 1111111 12234556789999999999999999999999886
Q ss_pred --C-ceeEEEe---ccCCCeEEEEEec
Q psy14906 194 --D-ESLMEFI---QTWGPVTALSFRT 214 (583)
Q Consensus 194 --~-~~~~~~~---~~~~~v~~~~~~~ 214 (583)
+ .....+. .....|..++|..
T Consensus 77 ~~~~~~~~~~~~pi~s~~~i~~~~FL~ 103 (504)
T PF10433_consen 77 DSDIAFSPHINSPIKSEGNILDMCFLH 103 (504)
T ss_dssp --T-TT---EEEE--S-SEEEEEEEES
T ss_pred cccccccccccccccCCceEEEEEEEe
Confidence 1 0111111 1247789999986
|
... |
| >PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A | Back alignment and domain information |
|---|
Probab=89.02 E-value=27 Score=35.10 Aligned_cols=397 Identities=9% Similarity=0.061 Sum_probs=164.1
Q ss_pred cCccEEEEccCCCEEEEEeCCCcEEEEEcCCC-------cEEEEeeccCCceEEecccCCcceEEEeeCC-----CCCEE
Q psy14906 110 HTSPVHLILPFGPHLISVDEESNVKVWDIKAE-------ETYLELSFDNDTFKIMGKRWNSCVNVLEPSP-----VVDII 177 (583)
Q Consensus 110 h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-----~~~~l 177 (583)
..+...++.|.|+.++.+..++.+.|+.+... ......+. .....|..++|-. +...+
T Consensus 44 ~~G~~l~vDP~~R~i~v~a~e~~~~v~~l~~~~~~~~~~~~~~~~pi----------~s~~~i~~~~FL~~~~~~~~p~l 113 (504)
T PF10433_consen 44 QPGQYLAVDPSGRCIAVSAYEGNFLVYPLNRSLDSDIAFSPHINSPI----------KSEGNILDMCFLHPSVGYDNPTL 113 (504)
T ss_dssp TT--EEEE-TTSSEEEEEEBTTEEEEEE-SS----T-TT---EEEE------------S-SEEEEEEEES---S-SS-EE
T ss_pred cCCcEEEECCcCCEEEEEecCCeEEEEEecccccccccccccccccc----------cCCceEEEEEEEecccCCCCceE
Confidence 34455667999999999999999999998870 01100110 1256778888875 23344
Q ss_pred EEEe--cCC--eEEEEEccCCceeEE----------E-eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC-CCC----
Q psy14906 178 GVGL--SNK--KIILHNILTDESLME----------F-IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL-EDR---- 237 (583)
Q Consensus 178 ~~~~--~d~--~i~iw~~~~~~~~~~----------~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~-~~~---- 237 (583)
|.-. ..+ .+..+++.....+.. + .....+..-+. .|.....++.++.+ +.+|.- ...
T Consensus 114 a~L~~~~~~~~~~~~y~w~~~~~l~~~~~~~~~~~~l~~~~~~p~~LIP-lp~~~ggllV~~~~--~i~y~~~~~~~~~~ 190 (504)
T PF10433_consen 114 AILYVDSQRRTHLVTYEWSLDDGLNHVISKSTLPIRLPNEDELPSFLIP-LPNPPGGLLVGGEN--IIIYKNHLIGSGDY 190 (504)
T ss_dssp EEEEEETT-EEEEEEEE--------EETTTTEEEE--EEEE-TTEEEEE-E-TTT-SEEEEESS--EEEEEE------TT
T ss_pred EEEEEEecccceeEEEeeecccccceeeeeccccccccccCCCccEEEE-cCCCCcEEEEECCE--EEEEeccccccccc
Confidence 4322 222 244444222221111 1 01112222222 23311134444432 444442 111
Q ss_pred eehh-hhh-hccccceEEEEE-------ecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC-CCCCeeEEEeeCCC
Q psy14906 238 QVEN-QIK-KAHRKVVTGAHF-------LYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH-SAPPNYIQFYGNSS 307 (583)
Q Consensus 238 ~~~~-~~~-~~~~~~v~~~~~-------~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~ 307 (583)
+... ... .....-+.+.+. ..++..++.+..+|.+....++.... ......-+. .....++.+...++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~lL~~e~G~l~~l~l~~~~~--~i~i~~~g~~~~~~s~l~~l~~g~ 268 (504)
T PF10433_consen 191 SFLSIPSPPSSSSSLWTSWARPERNISYDKDGDRILLQDEDGDLYLLTLDNDGG--SISITYLGTLCSIASSLTYLKNGG 268 (504)
T ss_dssp EEEEE--H-HHHTS-EEEEEE------SSTTSSEEEEEETTSEEEEEEEEEEEE--EEEEEEEEE--S-ESEEEEESTT-
T ss_pred ccccccCCccCCCceEEEEEeccccceecCCCCEEEEEeCCCeEEEEEEEECCC--eEEEEEcCCcCChhheEEEEcCCC
Confidence 1111 110 011222333332 34567888899999988887654321 111122222 44556777773222
Q ss_pred CEEEEeeCCCc--EEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccc------cEEE
Q psy14906 308 DNILSAAGDST--LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWN------NIAA 379 (583)
Q Consensus 308 ~~l~~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 379 (583)
.+++.|+.-|. +..|....-+... ......|+..+........... .+++
T Consensus 269 d~lf~gs~~gds~l~~~~~~~l~~~~----------------------~~~N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~ 326 (504)
T PF10433_consen 269 DYLFVGSEFGDSQLLQISLSNLEVLD----------------------SLPNWGPIVDFCVVDSSNSGQPSNPSSDQLVA 326 (504)
T ss_dssp -EEEEEESSS-EEEEEEESESEEEEE----------------------EE----SEEEEEEE-TSSSSS-------EEEE
T ss_pred EEEEEEEecCCcEEEEEeCCCcEEEE----------------------eccCcCCccceEEeccccCCCCcccccceEEE
Confidence 38888877544 4444422222222 1224455556655433322222 4555
Q ss_pred Eec--CCceEEEeecCcccccceeeecccccccCCCCceEEEEcc-CCcEEEEEecCceEEEEEcc---cCccccccCCC
Q psy14906 380 IHT--GKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH-CGNFVLIGYSSGHVDRFNIQ---SGAHRGSYGHD 453 (583)
Q Consensus 380 ~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~---~~~~~~~~~~~ 453 (583)
+.+ .+|.+++....-... ............ ..+..+.... ++.++++...+. -.++.+. ..+.+......
T Consensus 327 ~sG~g~~gsL~~lr~Gi~~~-~~~~~~~~l~~v--~~iW~l~~~~~~~~~lv~S~~~~-T~vl~~~~~d~~e~~~e~~~~ 402 (504)
T PF10433_consen 327 CSGAGKRGSLRILRNGIGIE-GLELASSELPGV--TGIWTLKLSSSDHSYLVLSFPNE-TRVLQISEGDDGEEVEEVEED 402 (504)
T ss_dssp EESSGGG-EEEEEEESBEEE---EEEEEEESTE--EEEEEE-SSSSSBSEEEEEESSE-EEEEEES----SSEEEEE---
T ss_pred EECcCCCCcEEEEeccCCce-eeeeeccCCCCc--eEEEEeeecCCCceEEEEEcCCc-eEEEEEecccCCcchhhhhhc
Confidence 543 356676665433222 011111111100 2233343332 245666666554 4455553 22222111100
Q ss_pred CCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc--CCeeeEEeccCCcEEEEEeCCceEEEEEc
Q psy14906 454 NQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD--NGISFFRTHQESSMLAVCLDDFTVNIIDI 531 (583)
Q Consensus 454 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 531 (583)
.+......+.+-.+. +..++=... ..|++.+.... +.......+ ..|.+.+. ++.+++++..++.+..+.+
T Consensus 403 ~f~~~~~Tl~~~~~~--~~~ivQVt~-~~i~l~~~~~~--~~~~~w~~~~~~~I~~a~~--~~~~v~v~~~~~~~~~~~~ 475 (504)
T PF10433_consen 403 GFDTDEPTLAAGNVG--DGRIVQVTP-KGIRLIDLEDG--KLTQEWKPPAGSIIVAASI--NDPQVLVALSGGELVYFEL 475 (504)
T ss_dssp TS-SSS-EEEEEEET--TTEEEEEES-SEEEEEESSST--SEEEEEE-TTS---SEEEE--SSSEEEEEE-TTEEEEEEE
T ss_pred cCCCCCCCeEEEEcC--CCeEEEEec-CeEEEEECCCC--eEEEEEeCCCCCeEEEEEE--CCCEEEEEEeCCcEEEEEE
Confidence 012222233322222 334444433 34777777665 555444333 34444444 4567777778889999998
Q ss_pred cccceEEeec-c----cccceeeEEecC
Q psy14906 532 DTCTIIRKLS-G----HMGQLTDADFSP 554 (583)
Q Consensus 532 ~~~~~~~~~~-~----h~~~v~~l~~s~ 554 (583)
+......... . ....|.|+...|
T Consensus 476 ~~~~~~~~~~~~~~~~~~~eis~l~i~p 503 (504)
T PF10433_consen 476 DDNKISVSDNDETILELDNEISCLSIEP 503 (504)
T ss_dssp ETTEEEEEEE----EE-SS-EEEEE---
T ss_pred ECCceeeeeeccccccCCCceEEEEeCC
Confidence 8766542222 1 356788887765
|
... |
| >KOG3616|consensus | Back alignment and domain information |
|---|
Probab=88.92 E-value=20 Score=36.34 Aligned_cols=85 Identities=7% Similarity=0.107 Sum_probs=54.1
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEE-EccCC
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW-HFKQT 491 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iw-d~~~~ 491 (583)
+.+.-+.++..+..++.-...-.+.++|+.+.+....+ .-.+-+.|-|....++.-+.|. +.|| +++..
T Consensus 338 ~~vdwielne~~~kllfrdkk~kl~l~di~s~qksmil---------nfcsymqwvp~sdvivaqn~dn-l~iwyn~d~p 407 (1636)
T KOG3616|consen 338 GAVDWIELNERAHKLLFRDKKLKLHLVDIESCQKSMIL---------NFCSYMQWVPGSDVIVAQNGDN-LCIWYNIDAP 407 (1636)
T ss_pred ccccceeccchhhhhhcccccceeEEEEcccchHHHHH---------HHhhhheeccCcceEEecCCCc-eEEEecCCcc
Confidence 45556666666667777677778889999876654433 2245678889888777766654 6666 55544
Q ss_pred CCCceEEeeccCCeeeEE
Q psy14906 492 GKPPLRSIKLDNGISFFR 509 (583)
Q Consensus 492 ~~~~~~~~~~~~~v~~~~ 509 (583)
+.+..+...+.|..+.
T Consensus 408 --eqvt~~kikgdv~~l~ 423 (1636)
T KOG3616|consen 408 --EQVTMFKIKGDVEALE 423 (1636)
T ss_pred --hhheeeEecccchhhh
Confidence 5555555555444443
|
|
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=88.90 E-value=3.2 Score=39.70 Aligned_cols=75 Identities=15% Similarity=0.093 Sum_probs=50.4
Q ss_pred CeeeEEeccCCcEEEEEeCCceEEEEE---------ccccceE--Eee---------cccccceeeEEecCCC---cEEE
Q psy14906 504 GISFFRTHQESSMLAVCLDDFTVNIID---------IDTCTII--RKL---------SGHMGQLTDADFSPDS---RWLI 560 (583)
Q Consensus 504 ~v~~~~~s~~~~~l~~~~~dg~i~i~d---------~~~~~~~--~~~---------~~h~~~v~~l~~s~d~---~~l~ 560 (583)
.|..+..++.|..++-.+.+|-+.++= ++.|+.. ++. ....-.+..++|+|+. ..|.
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~ 184 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV 184 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence 467788899999999999998655542 1334321 110 1112246678899975 5677
Q ss_pred EEeCCCeEEEEeCCCccc
Q psy14906 561 TASMDCTIRVWDIPSSQL 578 (583)
Q Consensus 561 s~~~d~~i~vw~~~~~~~ 578 (583)
.-+.|+.|++||+..-+.
T Consensus 185 iL~sdnviRiy~lS~~te 202 (741)
T KOG4460|consen 185 LLTSDNVIRIYSLSEPTE 202 (741)
T ss_pred EEecCcEEEEEecCCcch
Confidence 778899999999876543
|
|
| >COG5290 IkappaB kinase complex, IKAP component [Transcription] | Back alignment and domain information |
|---|
Probab=88.81 E-value=31 Score=35.47 Aligned_cols=101 Identities=15% Similarity=0.249 Sum_probs=58.1
Q ss_pred EEEEEecCCCCEEEEEcCCC-----cEEEEeCCC---CeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccC
Q psy14906 208 TALSFRTDGPPMMVSGSNTG-----HLTVWNLED---RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279 (583)
Q Consensus 208 ~~~~~~~~~~~~l~s~~~dg-----~i~vwd~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~ 279 (583)
..++|-|.|. .+++-..|| .|..+..+. |+.-. ..+....+..++|+-....++.+ ..+.+++| ..
T Consensus 250 ~~LSWkpqgS-~~ati~td~~~~S~~ViFfErNGLrHGef~l--r~~~dEk~~~~~wn~~s~vlav~-~~n~~~lw--tt 323 (1243)
T COG5290 250 HQLSWKPQGS-KYATIGTDGCSTSESVIFFERNGLRHGEFDL--RVGCDEKAFLENWNLLSTVLAVA-EGNLLKLW--TT 323 (1243)
T ss_pred hccccccCCc-eeeeeccCCCCCcceEEEEccCCcccCCccc--cCCchhhhhhhhhhHHHHHHHHh-hcceEEEE--Ec
Confidence 4589999999 888866554 356665432 22211 12344556677777665555544 46789999 43
Q ss_pred CCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC
Q psy14906 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD 316 (583)
Q Consensus 280 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 316 (583)
. +........-.-..+.-+.|+|.....++..+..
T Consensus 324 k--NyhWYLK~e~~ip~~s~vkwhpe~~nTl~f~d~~ 358 (1243)
T COG5290 324 K--NYHWYLKVERQIPGISYVKWHPEEKNTLLFRDGE 358 (1243)
T ss_pred c--ceEEEEEEeecCCCcceeeeccccCcEEEEecCC
Confidence 3 2222222222344567789998655556555443
|
|
| >KOG1983|consensus | Back alignment and domain information |
|---|
Probab=88.78 E-value=26 Score=38.32 Aligned_cols=28 Identities=14% Similarity=0.243 Sum_probs=24.6
Q ss_pred ccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy14906 248 RKVVTGAHFLYNEPLLVTSSPDNTLKLW 275 (583)
Q Consensus 248 ~~~v~~~~~~~~~~~l~s~~~d~~i~~w 275 (583)
......++|+|...+++.+...|.++++
T Consensus 35 ~~~~~~~afD~~q~llai~t~tg~i~~y 62 (993)
T KOG1983|consen 35 PSTPSALAFDPTQGLLAIGTRTGAIKIY 62 (993)
T ss_pred CCCCcceeeccccceEEEEEecccEEEe
Confidence 3455678999999999999999999999
|
|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
Probab=88.37 E-value=23 Score=33.45 Aligned_cols=53 Identities=13% Similarity=0.176 Sum_probs=28.2
Q ss_pred ccCCcEEEEEeCC----------------------ceEEEEEccccce--EEeecccccceeeEEecCCCcEEEEEeCC
Q psy14906 511 HQESSMLAVCLDD----------------------FTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWLITASMD 565 (583)
Q Consensus 511 s~~~~~l~~~~~d----------------------g~i~i~d~~~~~~--~~~~~~h~~~v~~l~~s~d~~~l~s~~~d 565 (583)
..++++.++|+.+ ..+.+||.++.+- +..+.. ..-...+..-++++++.|+.+
T Consensus 255 ~~~~~Iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~e~yd~~~~~W~~~~~lp~--~~~~~~~~~~~~~iyv~GG~~ 331 (346)
T TIGR03547 255 ISNGVLLVAGGANFPGAQENYKNGKLYAHEGLIKAWSSEVYALDNGKWSKVGKLPQ--GLAYGVSVSWNNGVLLIGGEN 331 (346)
T ss_pred EECCEEEEeecCCCCCchhhhhcCCccccCCCCceeEeeEEEecCCcccccCCCCC--CceeeEEEEcCCEEEEEeccC
Confidence 3577887887753 1467888775432 122211 111122333467777777765
|
Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein. |
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=88.31 E-value=17 Score=32.76 Aligned_cols=115 Identities=17% Similarity=0.184 Sum_probs=67.9
Q ss_pred CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe------cCCeEEEEEccCCceeEEEec--
Q psy14906 131 SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL------SNKKIILHNILTDESLMEFIQ-- 202 (583)
Q Consensus 131 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~------~d~~i~iw~~~~~~~~~~~~~-- 202 (583)
..|++||..+.+-..--. +-.+.|..|.|..+.++++.|. ....+..||+.+..- ..+..
T Consensus 16 ~~lC~yd~~~~qW~~~g~-----------~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w-~~~~~~~ 83 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPGN-----------GISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTW-SSLGGGS 83 (281)
T ss_pred CEEEEEECCCCEeecCCC-----------CceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCee-eecCCcc
Confidence 469999988765433222 5578999999997777777764 345688899875543 22333
Q ss_pred ---cCCCeEEEEEecC-CCCEEEEEc-CCC--cEEEEeCCCCeehhh-hhhccccceEEEEEec
Q psy14906 203 ---TWGPVTALSFRTD-GPPMMVSGS-NTG--HLTVWNLEDRQVENQ-IKKAHRKVVTGAHFLY 258 (583)
Q Consensus 203 ---~~~~v~~~~~~~~-~~~~l~s~~-~dg--~i~vwd~~~~~~~~~-~~~~~~~~v~~~~~~~ 258 (583)
-.++|..+.+..+ +..+.+.|. .+| .|..||-.+-..+.. . ......|..+.+.|
T Consensus 84 s~~ipgpv~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~~~-~~~~t~I~~l~~~~ 146 (281)
T PF12768_consen 84 SNSIPGPVTALTFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGSDI-LGSGTTIRGLQVLP 146 (281)
T ss_pred cccCCCcEEEEEeeccCCceEEEeceecCCCceEEEEcCCceEeccccc-cCCCCEEEEEEEEe
Confidence 2378888887543 332444443 233 466676554444433 2 22344566665543
|
|
| >TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family | Back alignment and domain information |
|---|
Probab=87.90 E-value=15 Score=35.72 Aligned_cols=104 Identities=12% Similarity=0.066 Sum_probs=0.0
Q ss_pred eEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee------ccCCeeeEEeccCC------cEEEEEe---------
Q psy14906 463 RGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK------LDNGISFFRTHQES------SMLAVCL--------- 521 (583)
Q Consensus 463 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------~~~~v~~~~~s~~~------~~l~~~~--------- 521 (583)
+.|+|.||+++|++--..|.|++++..+.....+..+. .......|+++|+- .+|.+..
T Consensus 33 w~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~~~~~ 112 (454)
T TIGR03606 33 WALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNGDKEL 112 (454)
T ss_pred eEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCCCCCc
Q ss_pred -CCceEEEEEcc-----ccceEEeecccccc----eeeEEecCCCcEEEEEeCCC
Q psy14906 522 -DDFTVNIIDID-----TCTIIRKLSGHMGQ----LTDADFSPDSRWLITASMDC 566 (583)
Q Consensus 522 -~dg~i~i~d~~-----~~~~~~~~~~h~~~----v~~l~~s~d~~~l~s~~~d~ 566 (583)
....|.-|.+. -......+.+.... -..|+|.|||.+.++.+..+
T Consensus 113 ~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~LYVs~GD~g 167 (454)
T TIGR03606 113 PNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGKIYYTIGEQG 167 (454)
T ss_pred cCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCcEEEEECCCC
|
PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis. |
| >PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases | Back alignment and domain information |
|---|
Probab=87.54 E-value=25 Score=32.92 Aligned_cols=231 Identities=12% Similarity=0.030 Sum_probs=107.8
Q ss_pred eEEEEe--eCeEEEEEcCCeEEEEecccee---eeee----cccCccEEEE--ccC---CCEEEEEeCC---------Cc
Q psy14906 76 ITCLSS--DFFHIYTSANNIIYAWRRGIDI---VGTY----KGHTSPVHLI--LPF---GPHLISVDEE---------SN 132 (583)
Q Consensus 76 v~~~~~--~~~~~~~~~~~~i~vw~~~~~~---~~~~----~~h~~~v~~i--s~~---~~~l~s~~~d---------g~ 132 (583)
.++|++ |++++++...|.|++++.++.. +..+ .........+ +|+ ..+|...... ..
T Consensus 4 P~~~a~~pdG~l~v~e~~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~~~ 83 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVAERSGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDNDNR 83 (331)
T ss_dssp EEEEEEETTSCEEEEETTTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEEEE
T ss_pred ceEEEEeCCCcEEEEeCCceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCccee
Confidence 355665 7789999899999999954443 2222 1234445554 553 3444433221 24
Q ss_pred EEEEEcCCC-cE------EE-EeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC-------------CeEEEEEc
Q psy14906 133 VKVWDIKAE-ET------YL-ELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN-------------KKIILHNI 191 (583)
Q Consensus 133 i~iwd~~~~-~~------~~-~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-------------~~i~iw~~ 191 (583)
|.-|....+ .. +. .+... ......-..|+|.|||.+.++.+.. |.|.-.+.
T Consensus 84 v~r~~~~~~~~~~~~~~~l~~~~p~~--------~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~ 155 (331)
T PF07995_consen 84 VVRFTLSDGDGDLSSEEVLVTGLPDT--------SSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDP 155 (331)
T ss_dssp EEEEEEETTSCEEEEEEEEEEEEES---------CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEET
T ss_pred eEEEeccCCccccccceEEEEEeCCC--------CCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEecc
Confidence 544555443 11 11 11100 0223445669999999766665433 23333332
Q ss_pred cCCc-------------eeEEE-eccCCCeEEEEEecC-CCCEEEE-EcCCCcEEEEeCCCCe-----------------
Q psy14906 192 LTDE-------------SLMEF-IQTWGPVTALSFRTD-GPPMMVS-GSNTGHLTVWNLEDRQ----------------- 238 (583)
Q Consensus 192 ~~~~-------------~~~~~-~~~~~~v~~~~~~~~-~~~~l~s-~~~dg~i~vwd~~~~~----------------- 238 (583)
. ++ ....+ .++ .....++|.|. |. ++++ -+.++.=.|--+..+.
T Consensus 156 d-G~~p~dnP~~~~~~~~~~i~A~Gl-RN~~~~~~d~~tg~-l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~ 232 (331)
T PF07995_consen 156 D-GSIPADNPFVGDDGADSEIYAYGL-RNPFGLAFDPNTGR-LWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPP 232 (331)
T ss_dssp T-SSB-TTSTTTTSTTSTTTEEEE---SEEEEEEEETTTTE-EEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-
T ss_pred c-CcCCCCCccccCCCceEEEEEeCC-CccccEEEECCCCc-EEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCc
Confidence 2 11 00111 133 45568899998 76 3333 1222222222222211
Q ss_pred ------------ehhhhhhccccceEEEEEec-------CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCee
Q psy14906 239 ------------VENQIKKAHRKVVTGAHFLY-------NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNY 299 (583)
Q Consensus 239 ------------~~~~~~~~~~~~v~~~~~~~-------~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~ 299 (583)
+...+ .+...+..+.|.. .|.+|++.-..+.|....++...........+......+..
T Consensus 233 ~~~~~~~~~~~~P~~~~--~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~ 310 (331)
T PF07995_consen 233 IGDAPSCPGFVPPVFAY--PPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRD 310 (331)
T ss_dssp ECTGSS-TTS---SEEE--TTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEE
T ss_pred cccccCCCCcCccceee--cCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceE
Confidence 11111 2224566677754 34455555545655555544221111122223344457899
Q ss_pred EEEeeCCCCEEEEeeCCCcEE
Q psy14906 300 IQFYGNSSDNILSAAGDSTLR 320 (583)
Q Consensus 300 ~~~~~~~~~~l~~~~~dg~i~ 320 (583)
+++.| ||.+.++...+|.|.
T Consensus 311 v~~~p-DG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 311 VAQGP-DGALYVSDDSDGKIY 330 (331)
T ss_dssp EEEET-TSEEEEEE-TTTTEE
T ss_pred EEEcC-CCeEEEEECCCCeEe
Confidence 99997 788888877788764
|
The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B .... |
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=87.35 E-value=2.7 Score=24.13 Aligned_cols=30 Identities=17% Similarity=0.408 Sum_probs=19.4
Q ss_pred ccccceeeEEecCCCcEEEEEe-CC--CeEEEE
Q psy14906 542 GHMGQLTDADFSPDSRWLITAS-MD--CTIRVW 571 (583)
Q Consensus 542 ~h~~~v~~l~~s~d~~~l~s~~-~d--~~i~vw 571 (583)
.....-....|||||++|+-++ .+ |.-.||
T Consensus 6 ~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 6 NSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp -SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred cCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 3455677889999999887554 44 555555
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2 | Back alignment and domain information |
|---|
Probab=86.99 E-value=25 Score=32.37 Aligned_cols=56 Identities=21% Similarity=0.274 Sum_probs=38.4
Q ss_pred EEEEEcCCCcEEEEeCCC--CeehhhhhhccccceEEEEEecCCCEEEEEe-CCCeEEEEEcc
Q psy14906 219 MMVSGSNTGHLTVWNLED--RQVENQIKKAHRKVVTGAHFLYNEPLLVTSS-PDNTLKLWIFD 278 (583)
Q Consensus 219 ~l~s~~~dg~i~vwd~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~ 278 (583)
+|+.|+++|... .++.. .+..+. .+...|+.+...+..+.|++-+ ....++.+++.
T Consensus 15 ~lL~GTe~Gly~-~~~~~~~~~~~kl---~~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~ 73 (302)
T smart00036 15 WLLVGTEEGLYV-LNISDQPGTLEKL---IGRRSVTQIWVLEENNVLLMISGKKPQLYSHPLS 73 (302)
T ss_pred EEEEEeCCceEE-EEcccCCCCeEEe---cCcCceEEEEEEhhhCEEEEEeCCcceEEEEEHH
Confidence 789999888544 45554 233333 3567899999999888776654 33449999874
|
Unpublished observations. |
| >PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12 | Back alignment and domain information |
|---|
Probab=86.98 E-value=24 Score=32.15 Aligned_cols=141 Identities=14% Similarity=0.169 Sum_probs=80.2
Q ss_pred CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCC-----CEEEEE-ecCCeEEEEEccCCceeEEEecc-
Q psy14906 131 SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVV-----DIIGVG-LSNKKIILHNILTDESLMEFIQT- 203 (583)
Q Consensus 131 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-----~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~- 203 (583)
-.|.+||+.+++.++++.++.... ...+.+..+++.... .++..+ ...+-|.|+|+.+++.-+.+..+
T Consensus 34 pKLv~~Dl~t~~li~~~~~p~~~~-----~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~ 108 (287)
T PF03022_consen 34 PKLVAFDLKTNQLIRRYPFPPDIA-----PPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSF 108 (287)
T ss_dssp -EEEEEETTTTCEEEEEE--CCCS------TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGC
T ss_pred cEEEEEECCCCcEEEEEECChHHc-----ccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCc
Confidence 378999999999999998875543 235678888877622 233222 33458999999988765544322
Q ss_pred ------------------CCCeEEEEEec---CCCCEEEEEcCCCcEEEEeCCC-----Ceeh------hhhh-hccc-c
Q psy14906 204 ------------------WGPVTALSFRT---DGPPMMVSGSNTGHLTVWNLED-----RQVE------NQIK-KAHR-K 249 (583)
Q Consensus 204 ------------------~~~v~~~~~~~---~~~~~l~s~~~dg~i~vwd~~~-----~~~~------~~~~-~~~~-~ 249 (583)
...+..++.+| +++ .|+-..-.+ -++|.+.+ .... ..+. .+.. .
T Consensus 109 ~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r-~LYf~~lss-~~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~~ 186 (287)
T PF03022_consen 109 SPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGR-WLYFHPLSS-RKLYRVPTSVLRDPSLSDAQALASQVQDLGDKGS 186 (287)
T ss_dssp TTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS--EEEEEETT--SEEEEEEHHHHCSTT--HHH-HHHT-EEEEE---
T ss_pred ceeccccceeccCceEecCCCccccccCCCCCCcc-EEEEEeCCC-CcEEEEEHHHhhCccccccccccccceeccccCC
Confidence 12355666655 554 444333222 22333221 1110 0110 1221 3
Q ss_pred ceEEEEEecCCCEEEEEeCCCeEEEEEcc
Q psy14906 250 VVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 250 ~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 278 (583)
....++++++|.++++--..+.|..|+.+
T Consensus 187 ~s~g~~~D~~G~ly~~~~~~~aI~~w~~~ 215 (287)
T PF03022_consen 187 QSDGMAIDPNGNLYFTDVEQNAIGCWDPD 215 (287)
T ss_dssp SECEEEEETTTEEEEEECCCTEEEEEETT
T ss_pred CCceEEECCCCcEEEecCCCCeEEEEeCC
Confidence 55678889999999888889999999654
|
5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B. |
| >PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[] | Back alignment and domain information |
|---|
Probab=86.87 E-value=46 Score=35.35 Aligned_cols=72 Identities=11% Similarity=0.034 Sum_probs=52.1
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCcccccc----CCCC------CC----CcccCeeEEEEeCCCcEEEEee
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY----GHDN------QP----GHVGGVRGVVSDNLNQIVISGG 478 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----~~~~------~~----~h~~~v~~~~~s~~~~~l~s~~ 478 (583)
..|.+++...-+..++....||+|.++|..+-+.+... .... .. .+...+..++|||.+..++.-.
T Consensus 260 ~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~ 339 (753)
T PF11635_consen 260 KRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQID 339 (753)
T ss_pred CeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEEe
Confidence 56888888888899999999999999998876554433 1000 00 1112445688999999999999
Q ss_pred cCCcEE
Q psy14906 479 NDQTVK 484 (583)
Q Consensus 479 ~dg~i~ 484 (583)
.+|.+.
T Consensus 340 ~~~~~~ 345 (753)
T PF11635_consen 340 EDGKTK 345 (753)
T ss_pred cCCCce
Confidence 999865
|
It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM. |
| >PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins | Back alignment and domain information |
|---|
Probab=86.59 E-value=36 Score=33.82 Aligned_cols=142 Identities=11% Similarity=0.145 Sum_probs=75.2
Q ss_pred cCCeEEEEeccceeeeeecccCccE--EEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEE
Q psy14906 90 ANNIIYAWRRGIDIVGTYKGHTSPV--HLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNV 167 (583)
Q Consensus 90 ~~~~i~vw~~~~~~~~~~~~h~~~v--~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 167 (583)
......+.|.+|.+...+....... ....++|.+++..+ ..++..|+. |+.+....+..... ..=..
T Consensus 126 ~~~~~~~iD~~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~--------~~HHD 194 (477)
T PF05935_consen 126 SSSYTYLIDNNGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYY--------DFHHD 194 (477)
T ss_dssp BEEEEEEEETTS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE---------B-S-
T ss_pred CCceEEEECCCccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCccc--------ccccc
Confidence 3456777777777655554333222 22378888887655 788889986 66666665432110 01124
Q ss_pred EeeCCCCCEEEEEec-------------CCeEEEEEccCCceeEEEe--ccC-------------------------CCe
Q psy14906 168 LEPSPVVDIIGVGLS-------------NKKIILHNILTDESLMEFI--QTW-------------------------GPV 207 (583)
Q Consensus 168 ~~~s~~~~~l~~~~~-------------d~~i~iw~~~~~~~~~~~~--~~~-------------------------~~v 207 (583)
+..-|+|++|+.+.. .-.|..+| .+|+.+..+. .|- --+
T Consensus 195 ~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~ 273 (477)
T PF05935_consen 195 IDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHI 273 (477)
T ss_dssp EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--E
T ss_pred cEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCcccc
Confidence 567789998887772 12466666 6777766643 110 126
Q ss_pred EEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhh
Q psy14906 208 TALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI 243 (583)
Q Consensus 208 ~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 243 (583)
+++.+.+.+..+++++-.-..|...|..+++....+
T Consensus 274 Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wil 309 (477)
T PF05935_consen 274 NSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWIL 309 (477)
T ss_dssp EEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEE
T ss_pred CccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEe
Confidence 788888844436777666667888887777776666
|
Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A. |
| >PF12768 Rax2: Cortical protein marker for cell polarity | Back alignment and domain information |
|---|
Probab=86.47 E-value=12 Score=33.78 Aligned_cols=99 Identities=13% Similarity=0.158 Sum_probs=59.8
Q ss_pred ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee------cCCcEEEEEccCCCCCceEE---eeccCC
Q psy14906 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG------NDQTVKVWHFKQTGKPPLRS---IKLDNG 504 (583)
Q Consensus 434 g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~---~~~~~~ 504 (583)
..|++||..+.+-...- .+-.+.|+++.|..+.++++.|. ....+..||+.+.....+.. -..+++
T Consensus 16 ~~lC~yd~~~~qW~~~g-----~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgp 90 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPG-----NGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGP 90 (281)
T ss_pred CEEEEEECCCCEeecCC-----CCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCc
Confidence 45899998876655444 45678899999997777777764 35568899988762111111 112367
Q ss_pred eeeEEecc-CCc-EEEEEe-CC--ceEEEEEccccceE
Q psy14906 505 ISFFRTHQ-ESS-MLAVCL-DD--FTVNIIDIDTCTII 537 (583)
Q Consensus 505 v~~~~~s~-~~~-~l~~~~-~d--g~i~i~d~~~~~~~ 537 (583)
+..+.+.. |+. +.+.|. .+ ..|..||-.+...+
T Consensus 91 v~a~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i 128 (281)
T PF12768_consen 91 VTALTFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSI 128 (281)
T ss_pred EEEEEeeccCCceEEEeceecCCCceEEEEcCCceEec
Confidence 77776642 333 444433 23 35666765444333
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 583 | ||||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 1e-12 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 4e-08 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 2e-05 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 2e-07 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 2e-07 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 5e-07 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 9e-07 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 2e-06 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 9e-07 | ||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 3e-06 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 9e-07 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 2e-06 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 1e-06 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 2e-06 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 1e-06 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 2e-06 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 1e-06 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 2e-06 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 1e-06 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 2e-06 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 1e-06 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 2e-06 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 1e-06 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 2e-06 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 1e-06 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 2e-06 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 1e-06 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 2e-06 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 1e-06 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 2e-06 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 1e-06 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 2e-06 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 2e-06 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 2e-06 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 3e-06 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 3e-06 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 3e-06 | ||
| 4aow_A | 340 | Crystal Structure Of The Human Rack1 Protein At A R | 3e-06 | ||
| 2zkq_a | 317 | Structure Of A Mammalian Ribosomal 40s Subunit With | 4e-06 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 6e-06 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 7e-06 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 8e-06 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 8e-06 | ||
| 3zey_7 | 318 | High-resolution Cryo-electron Microscopy Structure | 9e-06 | ||
| 2xzm_R | 343 | Crystal Structure Of The Eukaryotic 40s Ribosomal S | 1e-05 | ||
| 1p22_A | 435 | Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex | 2e-05 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 8e-05 | ||
| 3ow8_A | 321 | Crystal Structure Of The Wd Repeat-Containing Prote | 1e-04 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 2e-04 | ||
| 3dm0_A | 694 | Maltose Binding Protein Fusion With Rack1 From A. T | 4e-04 | ||
| 3mks_B | 464 | Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH | 6e-04 |
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340 | Back alignment and structure |
|
| >pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318 | Back alignment and structure |
|
| >pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343 | Back alignment and structure |
|
| >pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435 | Back alignment and structure |
|
| >pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694 | Back alignment and structure |
|
| >pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464 | Back alignment and structure |
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 583 | |||
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 100.0 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 100.0 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 100.0 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 100.0 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 100.0 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 100.0 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 100.0 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 100.0 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 100.0 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 100.0 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 100.0 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 100.0 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 100.0 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 100.0 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 100.0 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 100.0 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 100.0 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 100.0 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 100.0 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 100.0 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 100.0 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 100.0 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 100.0 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 100.0 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 100.0 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 100.0 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 100.0 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 100.0 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 100.0 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 100.0 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 100.0 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 100.0 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 100.0 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 100.0 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 100.0 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 100.0 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 100.0 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 100.0 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 100.0 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 100.0 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 100.0 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 100.0 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 100.0 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 100.0 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 100.0 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 100.0 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 100.0 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 100.0 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 100.0 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 100.0 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 100.0 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 100.0 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.97 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.97 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.97 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.97 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.97 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.96 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.96 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.96 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.96 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.95 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.95 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.95 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.95 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.95 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.94 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.94 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.94 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.94 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.93 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.93 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.93 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.93 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.93 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.92 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.92 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.92 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.92 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.91 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.91 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.91 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.91 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.89 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.89 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.89 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 99.88 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.88 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.88 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.87 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 99.87 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.87 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 99.85 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.85 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 99.85 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 99.83 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.83 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.81 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.81 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.8 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.8 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.8 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.79 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 99.78 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.78 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 99.78 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 99.77 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.76 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 99.76 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 99.76 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.76 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.76 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.74 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 99.74 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.74 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 99.73 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 99.73 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 99.73 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.72 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.71 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.71 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 99.7 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 99.69 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 99.67 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 99.67 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.67 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.66 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 99.65 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 99.65 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 99.62 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.59 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 99.58 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 99.58 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 99.57 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 99.57 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 99.57 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 99.56 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 99.56 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.54 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 99.53 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 99.53 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 99.52 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.52 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 99.52 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.51 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 99.5 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.5 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.49 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.49 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 99.46 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 99.46 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 99.46 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.46 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 99.45 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 99.45 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.43 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 99.43 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 99.43 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 99.38 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 99.35 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 99.35 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 99.34 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 99.33 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 99.31 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 99.27 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 99.26 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 99.25 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 99.24 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 99.23 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 99.23 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 99.22 | |
| 3s94_A | 619 | LRP-6, low-density lipoprotein receptor-related pr | 99.22 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 99.22 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 99.19 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 99.15 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 99.15 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 99.11 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 99.09 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 99.09 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 99.08 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 99.05 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 99.03 | |
| 4a0p_A | 628 | LRP6, LRP-6, low-density lipoprotein receptor-rela | 99.03 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 99.02 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.99 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.97 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 98.96 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 98.92 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.87 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 98.82 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 98.8 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 98.79 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.77 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.7 | |
| 3qqz_A | 255 | Putative uncharacterized protein YJIK; MCSG, PSI-2 | 98.67 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.66 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 98.66 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.66 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.65 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.64 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 98.64 | |
| 1ijq_A | 316 | LDL receptor, low-density lipoprotein receptor; be | 98.63 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 98.62 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.62 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 98.62 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.56 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 98.54 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.53 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 98.53 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 98.52 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 98.51 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 98.49 | |
| 3sov_A | 318 | LRP-6, low-density lipoprotein receptor-related pr | 98.49 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 98.49 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 98.4 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 98.39 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 98.37 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 98.3 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 98.29 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 98.29 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 98.22 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 98.22 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 98.21 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 98.2 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 98.16 | |
| 3ott_A | 758 | Two-component system sensor histidine kinase; beta | 98.09 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 98.03 | |
| 2p9w_A | 334 | MAL S 1 allergenic protein; beta propeller; 1.35A | 97.98 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 97.98 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.94 | |
| 2ism_A | 352 | Putative oxidoreductase; BL41XU spring-8, bladed b | 97.93 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 97.9 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.88 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 97.87 | |
| 3a9g_A | 354 | Putative uncharacterized protein; PQQ dependent de | 97.74 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 97.67 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 97.64 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 97.62 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 97.6 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 97.57 | |
| 3sre_A | 355 | PON1, serum paraoxonase; directed evolution, 6-bla | 97.57 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 97.53 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 97.5 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 97.5 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 97.45 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 97.4 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 97.38 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 97.3 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 97.28 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 97.19 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 97.14 | |
| 2g8s_A | 353 | Glucose/sorbosone dehydrogenases; bladed beta-prop | 97.13 | |
| 3s25_A | 302 | Hypothetical 7-bladed beta-propeller-like protein; | 97.09 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 97.04 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 97.03 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 97.02 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 96.99 | |
| 1xi4_A | 1630 | Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle | 96.98 | |
| 1tl2_A | 236 | L10, protein (tachylectin-2); animal lectin, horse | 96.82 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 96.81 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 96.67 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 96.63 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 96.56 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 96.07 | |
| 3qhy_B | 282 | Beta-lactamase inhibitory protein II; enyzme-inhib | 95.83 | |
| 2be1_A | 339 | Serine/threonine-protein kinase/endoribonuclease; | 95.77 | |
| 3das_A | 347 | Putative oxidoreductase; aldose sugar dehydrogenas | 95.47 | |
| 1cru_A | 454 | Protein (soluble quinoprotein glucose dehydrogena; | 95.4 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 94.49 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 94.01 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 92.88 | |
| 3b7f_A | 394 | Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop | 91.51 | |
| 3sbq_A | 638 | Nitrous-oxide reductase; beta-propeller, cupredoxi | 91.37 | |
| 3qhy_B | 282 | Beta-lactamase inhibitory protein II; enyzme-inhib | 90.92 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 88.39 | |
| 3b7f_A | 394 | Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop | 84.95 | |
| 4fhn_B | 1139 | Nucleoporin NUP120; protein complex,structural pro | 83.77 | |
| 4hvt_A | 711 | Ritya.17583.B, post-proline cleaving enzyme; ssgci | 83.15 | |
| 3q6k_A | 381 | 43.2 kDa salivary protein; beta propeller, binding | 81.32 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 80.98 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 80.84 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 80.24 |
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-68 Score=538.90 Aligned_cols=498 Identities=14% Similarity=0.174 Sum_probs=397.4
Q ss_pred eecCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eC-eEEEEEcCCeEEEEecc---c
Q psy14906 28 VSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DF-FHIYTSANNIIYAWRRG---I 101 (583)
Q Consensus 28 ~~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~-~~~~~~~~~~i~vw~~~---~ 101 (583)
.....+..+.|+|+++. ++++.++.|++||+++++....+.+|...|++++| |+ .+++++.|++|+|||.. .
T Consensus 16 ~~~g~~~~~~~spdg~~--l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~ 93 (611)
T 1nr0_A 16 TARGTAVVLGNTPAGDK--IQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTH 93 (611)
T ss_dssp CCTTCCCCCEECTTSSE--EEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTC
T ss_pred cccCceeEEeeCCCCCE--EEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcc
Confidence 34667788999998876 66667899999999999999999999999999998 45 46677799999999973 3
Q ss_pred eeeeeecccCccEEEE--ccCCCEEEEEeCC----CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCC
Q psy14906 102 DIVGTYKGHTSPVHLI--LPFGPHLISVDEE----SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD 175 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i--s~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 175 (583)
.....+.+|.++|.++ +|+|++|++++.+ +.|++|| .++....+. +|...|.+++|+|++.
T Consensus 94 ~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~-----------gh~~~v~~v~f~p~~~ 160 (611)
T 1nr0_A 94 ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLT-----------GQARAMNSVDFKPSRP 160 (611)
T ss_dssp CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCC-----------CCSSCEEEEEECSSSS
T ss_pred eeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceec-----------CCCCCceEEEECCCCC
Confidence 4556788999999997 9999999998865 3677776 555555665 9999999999999987
Q ss_pred -EEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhh------ccc
Q psy14906 176 -IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKK------AHR 248 (583)
Q Consensus 176 -~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~------~~~ 248 (583)
.|++|+.|++|++||..+++.+..+.+|...|.+++|+|+++ +|++++.|++|++||+.+++....+.. +|.
T Consensus 161 ~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~-~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~ 239 (611)
T 1nr0_A 161 FRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS-LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS 239 (611)
T ss_dssp CEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSS
T ss_pred eEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCC-EEEEEECCCcEEEEECCCCcEeeeeccccccccccC
Confidence 699999999999999999999999999999999999999999 999999999999999998887766622 799
Q ss_pred cceEEEEEecCCCEEEEEeCCCeEEEEEccCCCC---------------------------------------CceeeEE
Q psy14906 249 KVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG---------------------------------------NGRLLRI 289 (583)
Q Consensus 249 ~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~---------------------------------------~~~~~~~ 289 (583)
+.|.+++|+|++++|++++.|++|++||+..... .......
T Consensus 240 ~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~ 319 (611)
T 1nr0_A 240 GSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQV 319 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceE
Confidence 9999999999999999999999999998753110 0123345
Q ss_pred eccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecc
Q psy14906 290 REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLA 369 (583)
Q Consensus 290 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (583)
+.+|...|.+++|+| ++++|++++.|++|++||+.++.....+.. .+...+..+.+..
T Consensus 320 ~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~--------------------~h~~~v~~~~~s~- 377 (611)
T 1nr0_A 320 RYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPD--------------------VHATMITGIKTTS- 377 (611)
T ss_dssp ECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSC--------------------SCSSCEEEEEECT-
T ss_pred EcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeeeccc--------------------CCcceEEEEEECC-
Confidence 678999999999998 899999999999999999988765443211 0111222222221
Q ss_pred cccccccEEEEecCCceEEEeecCcccccce----------e----eecc-------------------cccccCCCCce
Q psy14906 370 REKDWNNIAAIHTGKNKVSLWSFYKSKMDDM----------F----LVPE-------------------RCKQAKQSKPT 416 (583)
Q Consensus 370 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----------~----~~~~-------------------~~~~~~~~~i~ 416 (583)
+..+++...++.+++|+......... . ..+. .....+...+.
T Consensus 378 -----~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~ 452 (611)
T 1nr0_A 378 -----KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSS 452 (611)
T ss_dssp -----TSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEE
T ss_pred -----CCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCce
Confidence 23455666677777777654321100 0 0000 00001235688
Q ss_pred EEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCce
Q psy14906 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPL 496 (583)
Q Consensus 417 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 496 (583)
+++|+|||++|++|+.|+.|++||+.++....... .+|...|++++|+|++++|++++.|++|++|++.+.. ++.
T Consensus 453 ~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~----~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~-~~~ 527 (611)
T 1nr0_A 453 CVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT----IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNF-ELA 527 (611)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE----EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTT-EES
T ss_pred EEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec----cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCC-cee
Confidence 99999999999999999999999998765321111 3799999999999999999999999999999998731 333
Q ss_pred EE--ee-ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccc-eE-Eeeccc-ccceeeEEecCCCcEEEEEeCCCeEEE
Q psy14906 497 RS--IK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT-II-RKLSGH-MGQLTDADFSPDSRWLITASMDCTIRV 570 (583)
Q Consensus 497 ~~--~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~-~~-~~~~~h-~~~v~~l~~s~d~~~l~s~~~d~~i~v 570 (583)
.. .. |...|.+++|+|||++||+|+.|++|++||+++++ .+ ..+.+| ...|.+++|+||++ |++++.|++|++
T Consensus 528 ~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~l 606 (611)
T 1nr0_A 528 HTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKF 606 (611)
T ss_dssp CCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEE
T ss_pred eeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCCEEE
Confidence 32 33 67899999999999999999999999999998865 33 577889 89999999999998 999999999999
Q ss_pred EeCC
Q psy14906 571 WDIP 574 (583)
Q Consensus 571 w~~~ 574 (583)
|++.
T Consensus 607 W~~~ 610 (611)
T 1nr0_A 607 WNVP 610 (611)
T ss_dssp EECC
T ss_pred Eecc
Confidence 9974
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-64 Score=512.07 Aligned_cols=496 Identities=22% Similarity=0.304 Sum_probs=411.3
Q ss_pred ecCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eC-eEEEEEcCCeEEEEeccceeee
Q psy14906 29 SNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DF-FHIYTSANNIIYAWRRGIDIVG 105 (583)
Q Consensus 29 ~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~-~~~~~~~~~~i~vw~~~~~~~~ 105 (583)
++....+++|+||++. +++++.|+.|+|||. ++++++.+.+|...|++++| |+ .+++++.|++|++||.+++.+.
T Consensus 15 H~~~V~~~a~spdg~~-las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~~~~~~ 92 (577)
T 2ymu_A 15 HSSSVRGVAFSPDGQT-IASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQ 92 (577)
T ss_dssp CSSCEEEEEECTTSSC-EEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEE
T ss_pred CCCcEEEEEECCCCCE-EEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCEEE
Confidence 3556688999999875 455568899999995 67888999999999999998 44 4667789999999999999999
Q ss_pred eecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEe---------eccCCce--------------------
Q psy14906 106 TYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLEL---------SFDNDTF-------------------- 154 (583)
Q Consensus 106 ~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---------~~~~~~~-------------------- 154 (583)
.+.+|..+|.++ +|++++|++++.|+.+++|+.......... .+.+...
T Consensus 93 ~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (577)
T 2ymu_A 93 TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQL 172 (577)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCE
T ss_pred EEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceeccccceee
Confidence 999999999987 999999999999999999997654322111 1111100
Q ss_pred EEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q psy14906 155 KIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL 234 (583)
Q Consensus 155 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 234 (583)
......+...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+|+++ +|++++.|+.|++||.
T Consensus 173 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s~dg~-~l~~~~~d~~i~~w~~ 250 (577)
T 2ymu_A 173 LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNR 250 (577)
T ss_dssp EEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECT
T ss_pred eeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEECCCCC-EEEEEeCCCEEEEEeC
Confidence 0001467889999999999999999999999999996 5788889999999999999999999 8999999999999996
Q ss_pred CCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee
Q psy14906 235 EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 235 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 314 (583)
. ++.+..+ .+|...|.+++|+|+++.|++++.|+.+++|+. ..+.+..+.+|...|.+++|+| +++++++++
T Consensus 251 ~-~~~~~~~-~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~-----~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~~ 322 (577)
T 2ymu_A 251 N-GQLLQTL-TGHSSSVNGVAFRPDGQTIASASDDKTVKLWNR-----NGQLLQTLTGHSSSVWGVAFSP-DGQTIASAS 322 (577)
T ss_dssp T-SCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEET-----TSCEEEEECCCSSCEEEEEECT-TSSEEEEEE
T ss_pred C-CCEEEEE-ecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeC-----CCcEEEEEecCCCCeEEEEECC-CCCEEEEEe
Confidence 5 5667777 789999999999999999999999999999965 4567788899999999999997 899999999
Q ss_pred CCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCc
Q psy14906 315 GDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYK 394 (583)
Q Consensus 315 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 394 (583)
.|+.|++||.......... .....+..+.+.. ....++++..++.+++|+...
T Consensus 323 ~d~~i~~w~~~~~~~~~~~----------------------~~~~~v~~~~~s~-----~g~~l~~~~~dg~v~~~~~~~ 375 (577)
T 2ymu_A 323 DDKTVKLWNRNGQHLQTLT----------------------GHSSSVWGVAFSP-----DGQTIASASDDKTVKLWNRNG 375 (577)
T ss_dssp TTSCEEEEETTSCEEEEEC----------------------CCSSCEEEEEECT-----TSSEEEEEETTSEEEEEETTC
T ss_pred CCCeEEEEeCCCCeeEEEe----------------------CCCCCEEEEEECC-----CCCEEEEEeCCCEEEEEcCCC
Confidence 9999999998654322111 0112223333322 246788889999999999654
Q ss_pred ccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEE
Q psy14906 395 SKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIV 474 (583)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 474 (583)
.... ....+...+.+++|+|++++|++++.|+.|++||. +++....+ .+|...|++++|+|++++|
T Consensus 376 ~~~~--------~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~-----~~~~~~v~~~~~s~d~~~l 441 (577)
T 2ymu_A 376 QLLQ--------TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTL-----TGHSSSVWGVAFSPDDQTI 441 (577)
T ss_dssp CEEE--------EEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEE-----ECCSSCEEEEEECTTSSEE
T ss_pred CEEE--------EecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEe-----cCCCCCeEEEEECCCCCEE
Confidence 3221 12234578999999999999999999999999995 56666666 6899999999999999999
Q ss_pred EEeecCCcEEEEEccCCCCCceEEe-eccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEec
Q psy14906 475 ISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFS 553 (583)
Q Consensus 475 ~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s 553 (583)
++++.|+.|++||... +.+..+ .+...|.+++|+|++++||+++.|+.|++||. +++++..+.+|...|++++|+
T Consensus 442 ~~~~~d~~v~~w~~~~---~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s 517 (577)
T 2ymu_A 442 ASASDDKTVKLWNRNG---QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFS 517 (577)
T ss_dssp EEEETTSEEEEEETTS---CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEEC
T ss_pred EEEcCCCEEEEEECCC---CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEc
Confidence 9999999999999754 444444 45679999999999999999999999999995 688899999999999999999
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 554 PDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 554 ~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
||+++||+++.|+.|++||. ++++++++
T Consensus 518 ~dg~~l~s~~~dg~v~lwd~-~~~~~~~~ 545 (577)
T 2ymu_A 518 PDGQTIASASDDKTVKLWNR-NGQLLQTL 545 (577)
T ss_dssp TTSSCEEEEETTSEEEEECT-TSCEEEEE
T ss_pred CCCCEEEEEECcCEEEEEeC-CCCEEEEE
Confidence 99999999999999999996 67777654
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-63 Score=505.00 Aligned_cols=455 Identities=16% Similarity=0.218 Sum_probs=370.3
Q ss_pred CCCCeEEEEe--eCeEEEEEcCCeEEEEecc-ceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCc--EE
Q psy14906 72 HEDDITCLSS--DFFHIYTSANNIIYAWRRG-IDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEE--TY 144 (583)
Q Consensus 72 h~~~v~~~~~--~~~~~~~~~~~~i~vw~~~-~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~--~~ 144 (583)
+.+.+.+++| ||++++.+.++.|++|++. ++....+.+|...|+++ +|+|++||+|+.|++|+|||+.+++ ..
T Consensus 17 ~~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~ 96 (611)
T 1nr0_A 17 ARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILK 96 (611)
T ss_dssp CTTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEE
T ss_pred ccCceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceee
Confidence 5666777777 6667766678899999974 67788999999999987 9999999999999999999997654 34
Q ss_pred EEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC----CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEE
Q psy14906 145 LELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN----KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMM 220 (583)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 220 (583)
..+. .|.+.|.+++|+|++++|++++.+ +.|++|| +++....+.+|...|++++|+|+++..|
T Consensus 97 ~~~~-----------~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l 163 (611)
T 1nr0_A 97 TTIP-----------VFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRI 163 (611)
T ss_dssp EEEE-----------CSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEE
T ss_pred Eeec-----------ccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEE
Confidence 4555 889999999999999999998765 3677776 5777788899999999999999998679
Q ss_pred EEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEec-------cC
Q psy14906 221 VSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE-------GH 293 (583)
Q Consensus 221 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~-------~~ 293 (583)
++++.|++|++||..++++...+ .+|...|.+++|+|++++|++++.|++|++|++. .++.+..+. +|
T Consensus 164 ~s~s~D~~v~lwd~~~~~~~~~l-~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~----~g~~~~~~~~~~~~~~~h 238 (611)
T 1nr0_A 164 ISGSDDNTVAIFEGPPFKFKSTF-GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV----DGTKTGVFEDDSLKNVAH 238 (611)
T ss_dssp EEEETTSCEEEEETTTBEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT----TCCEEEECBCTTSSSCSS
T ss_pred EEEeCCCeEEEEECCCCeEeeee-ccccCceEEEEECCCCCEEEEEECCCcEEEEECC----CCcEeeeecccccccccc
Confidence 99999999999999999888888 8999999999999999999999999999999764 345556663 79
Q ss_pred CCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccc
Q psy14906 294 SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKD 373 (583)
Q Consensus 294 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (583)
...|.+++|+| ++++|++++.|++|++||+.+++....+....... ........
T Consensus 239 ~~~V~~v~~sp-dg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~------------------~~~~~~~~------- 292 (611)
T 1nr0_A 239 SGSVFGLTWSP-DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIE------------------DQQLGIIW------- 292 (611)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGG------------------GCEEEEEE-------
T ss_pred CCCEEEEEECC-CCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCcc------------------ceeEEEEE-------
Confidence 99999999998 89999999999999999999887766553211000 00001111
Q ss_pred cccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCC
Q psy14906 374 WNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHD 453 (583)
Q Consensus 374 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 453 (583)
....+++...++.+++|+....... .....|...|.+++|+|+|++|++++.|+.|++||+.+++....+...
T Consensus 293 ~~~~l~s~s~d~~i~~~~~~~~~~~-------~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~ 365 (611)
T 1nr0_A 293 TKQALVSISANGFINFVNPELGSID-------QVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDV 365 (611)
T ss_dssp CSSCEEEEETTCCEEEEETTTTEEE-------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCS
T ss_pred cCCEEEEEeCCCcEEEEeCCCCCcc-------eEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccC
Confidence 2456778888999999998764321 122345688999999999999999999999999999876543322000
Q ss_pred -------------------------------------------CC----------------------------------C
Q psy14906 454 -------------------------------------------NQ----------------------------------P 456 (583)
Q Consensus 454 -------------------------------------------~~----------------------------------~ 456 (583)
.+ .
T Consensus 366 h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~ 445 (611)
T 1nr0_A 366 HATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEV 445 (611)
T ss_dssp CSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEE
T ss_pred CcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeee
Confidence 00 0
Q ss_pred CcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccc-cc
Q psy14906 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT-CT 535 (583)
Q Consensus 457 ~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~ 535 (583)
.|...+.+++|+||+++|++++.|++|++||+............+...|.+++|+|||++||+++.|++|++||+.+ ++
T Consensus 446 ~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~ 525 (611)
T 1nr0_A 446 PISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFE 525 (611)
T ss_dssp ECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTE
T ss_pred ecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCc
Confidence 12345789999999999999999999999999875211234456778999999999999999999999999999998 66
Q ss_pred eEEe--ecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCcc
Q psy14906 536 IIRK--LSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 536 ~~~~--~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~ 577 (583)
++.. +.+|...|.+++|+|||++||+++.|++|++|++++++
T Consensus 526 ~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 526 LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp ESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred eeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcc
Confidence 5543 34599999999999999999999999999999998865
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-62 Score=493.50 Aligned_cols=474 Identities=22% Similarity=0.318 Sum_probs=395.9
Q ss_pred cCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eC-eEEEEEcCCeEEEEeccceee--
Q psy14906 30 NHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DF-FHIYTSANNIIYAWRRGIDIV-- 104 (583)
Q Consensus 30 ~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~-~~~~~~~~~~i~vw~~~~~~~-- 104 (583)
..-..+++|+|+++. +++++.|+.|++||. +++++..+.+|...|.+++| ++ .+++++.|+.+++|+......
T Consensus 57 ~~~V~~l~fspdg~~-las~~~d~~i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~ 134 (577)
T 2ymu_A 57 SSSVWGVAFSPDGQT-IASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQT 134 (577)
T ss_dssp SSCEEEEEECTTSSE-EEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEE
T ss_pred CCCEEEEEECCCCCE-EEEEeCCCEEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeee
Confidence 344578899998764 556668999999995 56788889999999999998 44 567778999999998533222
Q ss_pred ---------------------------------------eeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcE
Q psy14906 105 ---------------------------------------GTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEET 143 (583)
Q Consensus 105 ---------------------------------------~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~ 143 (583)
.....|...|.++ +|++++|++++.|+.|++||. +++.
T Consensus 135 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~ 213 (577)
T 2ymu_A 135 LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQL 213 (577)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCE
T ss_pred ccCCCCceeeeeeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcE
Confidence 2233566667665 889999999999999999995 5677
Q ss_pred EEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEE
Q psy14906 144 YLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG 223 (583)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 223 (583)
+..+. .|...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+|+++ .++++
T Consensus 214 ~~~~~-----------~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~-~l~~~ 280 (577)
T 2ymu_A 214 LQTLT-----------GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQ-TIASA 280 (577)
T ss_dssp EEEEE-----------CCSSCEEEEEECTTSSCEEEEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSS-EEEEE
T ss_pred EEEEe-----------cCCCCEEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCC-EEEEE
Confidence 77777 89999999999999999999999999999996 4788889999999999999999999 89999
Q ss_pred cCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEe
Q psy14906 224 SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY 303 (583)
Q Consensus 224 ~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 303 (583)
+.|+.|++||.. ++....+ .+|...|.+++|+|++++|++++.|+.+++|+++ ...+..+.+|...+.+++|+
T Consensus 281 ~~d~~i~~w~~~-~~~~~~~-~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-----~~~~~~~~~~~~~v~~~~~s 353 (577)
T 2ymu_A 281 SDDKTVKLWNRN-GQLLQTL-TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-----GQHLQTLTGHSSSVWGVAFS 353 (577)
T ss_dssp ETTSCEEEEETT-SCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----SCEEEEECCCSSCEEEEEEC
T ss_pred eCCCEEEEEeCC-CcEEEEE-ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-----CCeeEEEeCCCCCEEEEEEC
Confidence 999999999975 5666667 7899999999999999999999999999999763 45567788999999999999
Q ss_pred eCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecC
Q psy14906 304 GNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTG 383 (583)
Q Consensus 304 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (583)
| ++++|++++.|+.+++||.. ++....+. .+...+..+.++. ....++++..
T Consensus 354 ~-~g~~l~~~~~dg~v~~~~~~-~~~~~~~~---------------------~~~~~v~~~~~s~-----dg~~l~~~~~ 405 (577)
T 2ymu_A 354 P-DGQTIASASDDKTVKLWNRN-GQLLQTLT---------------------GHSSSVRGVAFSP-----DGQTIASASD 405 (577)
T ss_dssp T-TSSEEEEEETTSEEEEEETT-CCEEEEEE---------------------CCSSCEEEEEECT-----TSSCEEEEET
T ss_pred C-CCCEEEEEeCCCEEEEEcCC-CCEEEEec---------------------CCCCCeEEEEECC-----CCCEEEEEeC
Confidence 7 89999999999999999964 33333221 1122333333332 2456788889
Q ss_pred CceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCee
Q psy14906 384 KNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVR 463 (583)
Q Consensus 384 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~ 463 (583)
++.+++|+....... ....+...+++++|+|++++|++++.|+.|++||. +++....+ .+|...|+
T Consensus 406 d~~v~~~~~~~~~~~--------~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~-----~~~~~~v~ 471 (577)
T 2ymu_A 406 DKTVKLWNRNGQLLQ--------TLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTL-----TGHSSSVR 471 (577)
T ss_dssp TSEEEEECTTCCEEE--------EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEE-----ECCSSCEE
T ss_pred CCEEEEEeCCCCEEE--------EecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEE-----cCCCCCEE
Confidence 999999996543221 12234578999999999999999999999999996 45666666 68999999
Q ss_pred EEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee-ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecc
Q psy14906 464 GVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG 542 (583)
Q Consensus 464 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 542 (583)
+++|+|++++|++++.|+.|++||.. + +++..+. +...|++++|+|+|++||+++.|+.|++||. +++++..+.+
T Consensus 472 ~~~~spd~~~las~~~d~~i~iw~~~-~--~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~ 547 (577)
T 2ymu_A 472 GVAFSPDGQTIASASDDKTVKLWNRN-G--QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG 547 (577)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEETT-S--CEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEEC
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEcCC-C--CEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcC
Confidence 99999999999999999999999964 3 5666655 4578999999999999999999999999996 6888999999
Q ss_pred cccceeeEEecCCCcEEEEEeCCCeEEEEe
Q psy14906 543 HMGQLTDADFSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 543 h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~ 572 (583)
|.+.|++++|+||+++|+|++.|++|++||
T Consensus 548 h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 548 HSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999999999999999999999999997
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-59 Score=480.33 Aligned_cols=509 Identities=11% Similarity=0.102 Sum_probs=408.9
Q ss_pred ecCcccEEEEEeCCCceEEEEeeCCeEEEEecCCc----EEEeecCCCCCC-eEEEEeeC-----eEEEEEcCCeEEEEe
Q psy14906 29 SNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHF----KLLSVSPQHEDD-ITCLSSDF-----FHIYTSANNIIYAWR 98 (583)
Q Consensus 29 ~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~----~~~~~~~~h~~~-v~~~~~~~-----~~~~~~~~~~i~vw~ 98 (583)
....+.+++|+|+++. ++++.++.|++||++++ +.+..+.+|... |+++++++ .+++++.|+.|++||
T Consensus 17 ~~~~v~~~~~spdg~~--l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~ 94 (615)
T 1pgu_A 17 QRNFTTHLSYDPTTNA--IAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWG 94 (615)
T ss_dssp CTTCCCCCEEETTTTE--EEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEE
T ss_pred ccCceeEEEECCCCCE--EEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEe
Confidence 4566788999999876 55556999999999999 889999999999 99999854 366677899999999
Q ss_pred cc---------ceeeeeecccCccEEEE--ccCCCEEEEEeCC----CcEEEEEcCCCcEEEEeeccCCceEEecccCCc
Q psy14906 99 RG---------IDIVGTYKGHTSPVHLI--LPFGPHLISVDEE----SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS 163 (583)
Q Consensus 99 ~~---------~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (583)
+. .+....+.+|..+|.++ +|++++|++++.+ +.|++|| .++.+..+. .|..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~-----------~~~~ 161 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVS-----------GHSQ 161 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECC-----------SCSS
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeee-----------cCCc
Confidence 83 46778889999999997 9999999999987 6788887 667777776 8999
Q ss_pred ceEEEeeCCCCC-EEEEEecCCeEEEEEccCCceeEEEeccCC---CeEEEEEecC-CCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 164 CVNVLEPSPVVD-IIGVGLSNKKIILHNILTDESLMEFIQTWG---PVTALSFRTD-GPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 164 ~i~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
.|.+++|+|+++ +|++++.|+.|++||+.+++.+..+..|.. .|.+++|+|+ ++ +|++++.||.|++||+.+++
T Consensus 162 ~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 162 RINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGE-FVITVGSDRKISCFDGKSGE 240 (615)
T ss_dssp CEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCC-EEEEEETTCCEEEEETTTCC
T ss_pred cEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCC-EEEEEeCCCeEEEEECCCCC
Confidence 999999999998 899999999999999999999999999988 9999999999 88 89999999999999999998
Q ss_pred ehhhhhh---ccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC----CCCCeeEEEeeCCCCEEE
Q psy14906 239 VENQIKK---AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH----SAPPNYIQFYGNSSDNIL 311 (583)
Q Consensus 239 ~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~ 311 (583)
.+..+.. .|...|.+++|+ ++++|++++.|+.|++|++. ..+.+..+..+ ...+.++.|. ++.+++
T Consensus 241 ~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 313 (615)
T 1pgu_A 241 FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVT----TSKCVQKWTLDKQQLGNQQVGVVAT--GNGRII 313 (615)
T ss_dssp EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETT----TTEEEEEEECCTTCGGGCEEEEEEE--ETTEEE
T ss_pred EeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECC----CCcEEEEEcCCCCcccCceeEEEeC--CCCeEE
Confidence 8887734 799999999999 99999999999999999775 45666666665 3567778875 788999
Q ss_pred EeeCCCcEEEEEccccccceeeccchhhh-hhhh---hhcchhcccc--------ccCCCccceeeeecccccccccEEE
Q psy14906 312 SAAGDSTLRIFNTKSETSNKNLGIASANR-NNLK---RKNRLEKMNE--------KFILPPVSQFSFGLAREKDWNNIAA 379 (583)
Q Consensus 312 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (583)
+++.||.|++||+.+++....+....... .... ..+....... ..+...+..+.+ .....++
T Consensus 314 ~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~------~~~~~l~ 387 (615)
T 1pgu_A 314 SLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN------SKAQEYS 387 (615)
T ss_dssp EEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC------CSTTCCE
T ss_pred EEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE------CCCcEEE
Confidence 99999999999999877665552211000 0000 0000000000 111112222222 1245677
Q ss_pred EecCCceEEEeecCcccccce----------------------eee----cccccccCCCCceEEEEccCCcEEEEEec-
Q psy14906 380 IHTGKNKVSLWSFYKSKMDDM----------------------FLV----PERCKQAKQSKPTCVYITHCGNFVLIGYS- 432 (583)
Q Consensus 380 ~~~~~~~i~~~~~~~~~~~~~----------------------~~~----~~~~~~~~~~~i~~~~~s~~~~~l~~~~~- 432 (583)
++..++.+++|+......... ... .......+...+.+++++ ++++++++.
T Consensus 388 ~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~ 465 (615)
T 1pgu_A 388 SISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLS--QNYVAVGLEE 465 (615)
T ss_dssp EEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEEC--SSEEEEEETT
T ss_pred EEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEc--CCEEEEeecC
Confidence 788888999998765432000 000 000000134678899999 889999999
Q ss_pred CceEEEEEcccCccc-cccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee--ccCCeeeEE
Q psy14906 433 SGHVDRFNIQSGAHR-GSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK--LDNGISFFR 509 (583)
Q Consensus 433 dg~i~i~d~~~~~~~-~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~~~ 509 (583)
+|.|++||+.+++.. ..+ ..|...|++++|+|++++|++++.||.|++||+.++ +++..+. +...|++++
T Consensus 466 d~~i~~~~~~~~~~~~~~~-----~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~--~~~~~~~~~h~~~v~~~~ 538 (615)
T 1pgu_A 466 GNTIQVFKLSDLEVSFDLK-----TPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSR--EVKTSRWAFRTSKINAIS 538 (615)
T ss_dssp TSCEEEEETTEEEEEEECS-----SCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEECCSCCCSSCEEEEE
T ss_pred CCeEEEEECCCcccccccc-----CCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCC--cceeEeecCCCCceeEEE
Confidence 999999999987665 344 689999999999999999999999999999999988 7777665 668999999
Q ss_pred ecc----------CCcEEEEEeCCceEEEEEcccc-ceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCc
Q psy14906 510 THQ----------ESSMLAVCLDDFTVNIIDIDTC-TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576 (583)
Q Consensus 510 ~s~----------~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~ 576 (583)
|+| ++++||+++.||.|++||++++ +++..+.+|...|++++|+||++ |++++.|+.|++|+++++
T Consensus 539 ~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 539 WKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp ECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC--
T ss_pred EcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeecC
Confidence 999 9999999999999999999998 78889999999999999999999 999999999999999753
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-59 Score=515.25 Aligned_cols=486 Identities=16% Similarity=0.204 Sum_probs=415.3
Q ss_pred cCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eC-eEEEEEcCCeEEEEec-cceeee
Q psy14906 30 NHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DF-FHIYTSANNIIYAWRR-GIDIVG 105 (583)
Q Consensus 30 ~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~-~~~~~~~~~~i~vw~~-~~~~~~ 105 (583)
.....+++|+|+++. +++++.|+.|++||+.+++.+..+.+|...|.+++| ++ .+++++.|+.|++||. .++.+.
T Consensus 615 ~~~v~~~~~s~~~~~-l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~ 693 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQR-IASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH 693 (1249)
T ss_dssp SSCEEEEEECTTSSE-EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred cccEEEEEECCCCCE-EEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 455678899988765 455678999999999999999999999999999999 44 5777789999999996 568889
Q ss_pred eecccCccEEEE--cc--CCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe
Q psy14906 106 TYKGHTSPVHLI--LP--FGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL 181 (583)
Q Consensus 106 ~~~~h~~~v~~i--s~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 181 (583)
.+.+|...|.++ +| ++.++++++.|+.|++||+.+++++..+. +|...|.+++|+|++++|++++
T Consensus 694 ~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~-----------~h~~~v~~~~~sp~~~~l~s~s 762 (1249)
T 3sfz_A 694 TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF-----------GHTNSVNHCRFSPDDELLASCS 762 (1249)
T ss_dssp EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC-----------CCSSCEEEEEECSSTTEEEEEE
T ss_pred EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec-----------CCCCCEEEEEEecCCCEEEEEE
Confidence 999999999997 67 55689999999999999999999999887 9999999999999999999999
Q ss_pred cCCeEEEEEccCCceeEEEe-------------------------------------------------------ccCCC
Q psy14906 182 SNKKIILHNILTDESLMEFI-------------------------------------------------------QTWGP 206 (583)
Q Consensus 182 ~d~~i~iw~~~~~~~~~~~~-------------------------------------------------------~~~~~ 206 (583)
.||.|++||+.+++....+. +|...
T Consensus 763 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 842 (1249)
T 3sfz_A 763 ADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHST 842 (1249)
T ss_dssp SSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSC
T ss_pred CCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCc
Confidence 99999999998775543321 56788
Q ss_pred eEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCC------
Q psy14906 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA------ 280 (583)
Q Consensus 207 v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~------ 280 (583)
|.+++|+|+++ ++++++.||.|++||+.+++.+..+ .+|...|.+++|+|++++|++++.|+.+++|++...
T Consensus 843 v~~~~~sp~~~-~l~~~~~dg~v~vwd~~~~~~~~~~-~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~ 920 (1249)
T 3sfz_A 843 IQYCDFSPYDH-LAVIALSQYCVELWNIDSRLKVADC-RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAI 920 (1249)
T ss_dssp CCEEEECSSTT-EEEEECSSSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSS
T ss_pred eEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceeeec-CCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeee
Confidence 99999999999 9999999999999999999999888 799999999999999999999999999999985310
Q ss_pred ---------------------------------------------------------------------CCCceeeEEec
Q psy14906 281 ---------------------------------------------------------------------DGNGRLLRIRE 291 (583)
Q Consensus 281 ---------------------------------------------------------------------~~~~~~~~~~~ 291 (583)
.........+.
T Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~ 1000 (1249)
T 3sfz_A 921 VLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGV 1000 (1249)
T ss_dssp SEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECC
T ss_pred cccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecc
Confidence 00123345566
Q ss_pred cCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccc
Q psy14906 292 GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLARE 371 (583)
Q Consensus 292 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (583)
+|...|.+++|+| ++++|++++.||.|++||+.++....... ....+..+.+..
T Consensus 1001 ~h~~~v~~l~~s~-dg~~l~s~~~dg~i~vwd~~~~~~~~~~~----------------------~~~~v~~~~~~~--- 1054 (1249)
T 3sfz_A 1001 GHKKAVRHIQFTA-DGKTLISSSEDSVIQVWNWQTGDYVFLQA----------------------HQETVKDFRLLQ--- 1054 (1249)
T ss_dssp CCSSCCCCEEECS-SSSCEEEECSSSBEEEEETTTTEEECCBC----------------------CSSCEEEEEECS---
T ss_pred cCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCceEEEec----------------------CCCcEEEEEEcC---
Confidence 7999999999997 89999999999999999998876543221 112223333322
Q ss_pred cccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccC
Q psy14906 372 KDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYG 451 (583)
Q Consensus 372 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 451 (583)
+..+++...++.+++||.......... ..+...+.+++|+|+++++++++.||.|++||+.+++....+
T Consensus 1055 ---~~~l~~~~~dg~v~vwd~~~~~~~~~~-------~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l- 1123 (1249)
T 3sfz_A 1055 ---DSRLLSWSFDGTVKVWNVITGRIERDF-------TCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHEL- 1123 (1249)
T ss_dssp ---SSEEEEEESSSEEEEEETTTTCCCEEE-------ECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCC-
T ss_pred ---CCcEEEEECCCcEEEEECCCCceeEEE-------cccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeee-
Confidence 345778888999999999876543222 234478999999999999999999999999999999988887
Q ss_pred CCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEe----------eccCCeeeEEeccCCcEEEEEe
Q psy14906 452 HDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI----------KLDNGISFFRTHQESSMLAVCL 521 (583)
Q Consensus 452 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----------~~~~~v~~~~~s~~~~~l~~~~ 521 (583)
.+|...|++++|+|++++|++++.||.|++||+.++ +.+..+ .+...|++++|+|||++|++++
T Consensus 1124 ----~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~ 1197 (1249)
T 3sfz_A 1124 ----KGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDG--QLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG 1197 (1249)
T ss_dssp ----CCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSS--CCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES
T ss_pred ----ccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCC--ceEEEeccccccccccccCceEEEEEECCCCCEEEECC
Confidence 799999999999999999999999999999999987 554433 3567899999999999999885
Q ss_pred CCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 522 DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 522 ~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
|.|++||+.+++.+..+.+|...|.+++|+||+++|++++.||.|++|++.
T Consensus 1198 --g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1198 --GYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp --SSEEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEECTTCCEEEECCC
T ss_pred --CeEEEEECCCCceeeeeeccCCcccEEEECCCCCEEEEecCCcEEEEEeec
Confidence 899999999999999999999999999999999999999999999999974
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-55 Score=460.66 Aligned_cols=550 Identities=13% Similarity=0.120 Sum_probs=391.1
Q ss_pred cccceeeeeeeeeeecCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEee-C-eEEEEEcCC
Q psy14906 15 SSKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSD-F-FHIYTSANN 92 (583)
Q Consensus 15 ~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~-~-~~~~~~~~~ 92 (583)
.+..|.++...-+-......+++|+|+++. +++++.|+.|++||..+.+....+. |...|.+++|. + .+++++.|+
T Consensus 2 ~~~~~~~~~~~~~gh~~~V~~lafspdg~~-lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fspg~~L~S~s~D~ 79 (902)
T 2oaj_A 2 KNKIFSLAETNKYGMSSKPIAAAFDFTQNL-LAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVKGIYLVVINAKD 79 (902)
T ss_dssp CCTTEEEEEEEEEECSSCEEEEEEETTTTE-EEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEETTTEEEEEETTC
T ss_pred chheeeeccccccCCCCCcEEEEECCCCCE-EEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcCCCEEEEEECcC
Confidence 456777766655445677889999998754 5556689999999999888877654 88899999985 3 488889999
Q ss_pred eEEEEecc-ceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceE-EecccCCcceEEE
Q psy14906 93 IIYAWRRG-IDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFK-IMGKRWNSCVNVL 168 (583)
Q Consensus 93 ~i~vw~~~-~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~ 168 (583)
+|++||+. ++.+..+. |.+.|+++ +|++++|++|+.||+|++||+.+++.. .+........ ....+|.+.|.++
T Consensus 80 ~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl 157 (902)
T 2oaj_A 80 TVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSI 157 (902)
T ss_dssp EEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEE
T ss_pred eEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceeccccccccccccCCCCeEEE
Confidence 99999974 56666775 77889987 999999999999999999999988763 2211000000 0002788999999
Q ss_pred eeCCC-CCEEEEEecCCeEEEEEccCCceeEEEecc------------------CCCeEEEEEecCCCCEEEEEcCCCcE
Q psy14906 169 EPSPV-VDIIGVGLSNKKIILHNILTDESLMEFIQT------------------WGPVTALSFRTDGPPMMVSGSNTGHL 229 (583)
Q Consensus 169 ~~s~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~~l~s~~~dg~i 229 (583)
+|+|+ +..|++|+.|+.| +||+++++.+..+..| ...|++++|+|+|+ +|++++.||.|
T Consensus 158 ~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i 235 (902)
T 2oaj_A 158 QWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSL 235 (902)
T ss_dssp EEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCE
T ss_pred EEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeE
Confidence 99996 5789999999999 9999999998888765 47799999999999 99999999999
Q ss_pred EEEeCCCCeehhh--hh--h-------------ccccceEEEEEec----CC-CEEEEEeCC-----CeEEEEEccCCC-
Q psy14906 230 TVWNLEDRQVENQ--IK--K-------------AHRKVVTGAHFLY----NE-PLLVTSSPD-----NTLKLWIFDKAD- 281 (583)
Q Consensus 230 ~vwd~~~~~~~~~--~~--~-------------~~~~~v~~~~~~~----~~-~~l~s~~~d-----~~i~~w~~~~~~- 281 (583)
++||+++++++.. +. . .|...|.+++|++ ++ .+|++|+.+ ..+.+|++....
T Consensus 236 ~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~ 315 (902)
T 2oaj_A 236 VFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPR 315 (902)
T ss_dssp EEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCC
T ss_pred EEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCC
Confidence 9999998876542 20 1 1355799999964 33 467777665 378888642110
Q ss_pred -------------CCceeeEEec-cCCCCCeeEEEee---------CCCCEEEEeeCCCcEEEEEccccccceeec--cc
Q psy14906 282 -------------GNGRLLRIRE-GHSAPPNYIQFYG---------NSSDNILSAAGDSTLRIFNTKSETSNKNLG--IA 336 (583)
Q Consensus 282 -------------~~~~~~~~~~-~~~~~v~~~~~~~---------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~ 336 (583)
...+....+. .+...|..+.+.+ .+...+++++.||.|++||+.++....... ..
T Consensus 316 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~ 395 (902)
T 2oaj_A 316 YSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQ 395 (902)
T ss_dssp GGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCG
T ss_pred ccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCC
Confidence 0112233333 3567788888765 234578899999999999997664322100 00
Q ss_pred hhhhhh------hhh--hcchhc------cccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccccee-
Q psy14906 337 SANRNN------LKR--KNRLEK------MNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF- 401 (583)
Q Consensus 337 ~~~~~~------~~~--~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~- 401 (583)
...... ... ....+. ......+.......... .......+++++..|+.|++||+.........
T Consensus 396 ~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv-~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~ 474 (902)
T 2oaj_A 396 NLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQK-LPAEYGTAFITGHSNGSVRIYDASHGDIQDNAS 474 (902)
T ss_dssp GGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCC-CCCSEEEEEEEEETTSEEEEEESSCCTTTTTBC
T ss_pred cccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcc-cccccCcEEEEecCCCcEEEEECCCccccCCce
Confidence 000000 000 000000 00000000000000000 01123578999999999999999876432110
Q ss_pred eec---ccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcc--------------------------------
Q psy14906 402 LVP---ERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH-------------------------------- 446 (583)
Q Consensus 402 ~~~---~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-------------------------------- 446 (583)
+.. ......|...|.+++|+||+++||+|+.||+|++||+.+++.
T Consensus 475 ~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (902)
T 2oaj_A 475 FEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVR 554 (902)
T ss_dssp EEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECG
T ss_pred EEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCcccccccc
Confidence 100 001125567899999999999999999999999999987632
Q ss_pred -------------ccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEE-----e--eccCCee
Q psy14906 447 -------------RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS-----I--KLDNGIS 506 (583)
Q Consensus 447 -------------~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~--~~~~~v~ 506 (583)
+..+ .+|.+.|++++|+||| +||+|+.|++|++||+++. ..+.. + .|...|+
T Consensus 555 ~~~~~~~~~g~~~~~~l-----~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~--~~~~~~~~~~~~~gh~~~V~ 626 (902)
T 2oaj_A 555 DRAPTGVRQGFMPSTAV-----HANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGP--AIIYMENIREISGAQSACVT 626 (902)
T ss_dssp GGCCTTCSEEEEEEEEE-----CCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTT--EEEEEEEGGGTCSSCCCCEE
T ss_pred ccCCCCCCCccceeEEE-----EcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCC--eEEEEeehhHhccccccceE
Confidence 2333 6799999999999999 9999999999999998776 44421 2 3456799
Q ss_pred eEEec-----cCC---cEEEEEeCCceEEEEEc---cccceEEeecccc-----cceeeEE-ec----------------
Q psy14906 507 FFRTH-----QES---SMLAVCLDDFTVNIIDI---DTCTIIRKLSGHM-----GQLTDAD-FS---------------- 553 (583)
Q Consensus 507 ~~~~s-----~~~---~~l~~~~~dg~i~i~d~---~~~~~~~~~~~h~-----~~v~~l~-~s---------------- 553 (583)
+++|+ ||| ++|++|+.|++|++||+ .+|+....+.+|. ++|..++ |+
T Consensus 627 sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~ 706 (902)
T 2oaj_A 627 CIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQN 706 (902)
T ss_dssp EEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHG
T ss_pred EEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhc
Confidence 99999 886 89999999999999999 8888888888774 6788777 65
Q ss_pred ------CCCcEEEEEeCCCeEEEEeCCCcccccc
Q psy14906 554 ------PDSRWLITASMDCTIRVWDIPSSQLIDC 581 (583)
Q Consensus 554 ------~d~~~l~s~~~d~~i~vw~~~~~~~~~~ 581 (583)
+++..|+++ +..|+||++.++++++.
T Consensus 707 l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~~k 738 (902)
T 2oaj_A 707 LSKGLCIPGIVLITG--FDDIRLITLGKSKSTHK 738 (902)
T ss_dssp GGGTCCCCEEEEEEC--SSEEEEECTTCCCEEEE
T ss_pred cCCCCCCCeEEEEEe--ccceEEEeCccccceee
Confidence 455555544 77899999999988754
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-56 Score=465.07 Aligned_cols=490 Identities=11% Similarity=0.116 Sum_probs=351.8
Q ss_pred CCCCCCeEEEEeeC---eEEEEEcCCeEEEEeccceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEE
Q psy14906 70 PQHEDDITCLSSDF---FHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETY 144 (583)
Q Consensus 70 ~~h~~~v~~~~~~~---~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~ 144 (583)
.+|...|+|++|++ .+++++.|++|++|+...........|..+|.++ +| |++|++++.|++|++||+.+++++
T Consensus 14 ~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~ 92 (902)
T 2oaj_A 14 YGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVL 92 (902)
T ss_dssp EECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEE
T ss_pred cCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEE
Confidence 47999999999954 4667789999999997654443344588899987 88 889999999999999999999988
Q ss_pred EEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCcee-----------EEEeccCCCeEEEEEe
Q psy14906 145 LELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL-----------MEFIQTWGPVTALSFR 213 (583)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~-----------~~~~~~~~~v~~~~~~ 213 (583)
..+. |...|++++|+|++++|++|+.||.|++||+++++.. ..+.+|.+.|.+++|+
T Consensus 93 ~~~~------------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~s 160 (902)
T 2oaj_A 93 TTVF------------VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWN 160 (902)
T ss_dssp EEEE------------CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEE
T ss_pred EEEc------------CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEc
Confidence 8873 4578999999999999999999999999999987753 2235688999999999
Q ss_pred cCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhcc------------------ccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy14906 214 TDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAH------------------RKVVTGAHFLYNEPLLVTSSPDNTLKLW 275 (583)
Q Consensus 214 ~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~l~s~~~d~~i~~w 275 (583)
|++..++++|+.||.| +||+++++.+..+ ..| ...|.+++|+|+|++|++++.|+.|++|
T Consensus 161 p~~~~~l~~g~~dg~v-lWd~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lW 238 (902)
T 2oaj_A 161 PRDIGTVLISYEYVTL-TYSLVENEIKQSF-IYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFW 238 (902)
T ss_dssp TTEEEEEEEECSSCEE-EEETTTTEEEEEE-CCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred cCCCCEEEEEeCCCcE-EEECCCCceEEEE-ecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEE
Confidence 9754489999999999 9999998877666 333 5789999999999999999999999999
Q ss_pred EccCCCCCceeeEE--e---cc-------------CCCCCeeEEEeeC---C-CCEEEEeeCC-----CcEEEEEccccc
Q psy14906 276 IFDKADGNGRLLRI--R---EG-------------HSAPPNYIQFYGN---S-SDNILSAAGD-----STLRIFNTKSET 328 (583)
Q Consensus 276 ~~~~~~~~~~~~~~--~---~~-------------~~~~v~~~~~~~~---~-~~~l~~~~~d-----g~i~iwd~~~~~ 328 (583)
|+.. ++.+.. + .. |..+|.+++|++. + +..+++++.+ ..+.+|++....
T Consensus 239 d~~~----g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~ 314 (902)
T 2oaj_A 239 DANS----GHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTP 314 (902)
T ss_dssp ETTT----CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECC
T ss_pred ECCC----CcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCC
Confidence 7652 333332 2 11 3457999999752 2 2567777665 378899854210
Q ss_pred cceeeccchhhhhhhh-hhcchhccccccCCCccceeeeeccc-----ccccccEEEEecCCceEEEeecCccccccee-
Q psy14906 329 SNKNLGIASANRNNLK-RKNRLEKMNEKFILPPVSQFSFGLAR-----EKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF- 401 (583)
Q Consensus 329 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~- 401 (583)
.. ...+....... ................+..+.+.... .......+++...++.+++|++.........
T Consensus 315 ~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~ 391 (902)
T 2oaj_A 315 RY---SITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKAS 391 (902)
T ss_dssp CG---GGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGG
T ss_pred Cc---cccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccc
Confidence 00 00000000000 00000000000001112222221100 0011235666677899999998543211100
Q ss_pred -----------------e----------------ecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcccc
Q psy14906 402 -----------------L----------------VPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRG 448 (583)
Q Consensus 402 -----------------~----------------~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~ 448 (583)
+ ........+...+.+++|+|++++|++|+.|++|++||+.++....
T Consensus 392 ~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~ 471 (902)
T 2oaj_A 392 LFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQD 471 (902)
T ss_dssp GSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTT
T ss_pred cCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccC
Confidence 0 0000112223455667889999999999999999999999885321
Q ss_pred c--cCCC----CCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCC-----------------------------
Q psy14906 449 S--YGHD----NQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK----------------------------- 493 (583)
Q Consensus 449 ~--~~~~----~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~----------------------------- 493 (583)
. +... ...+|...|++++|+||+++||+|+.||+|++||+.++..
T Consensus 472 ~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (902)
T 2oaj_A 472 NASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLV 551 (902)
T ss_dssp TBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEE
T ss_pred CceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccc
Confidence 0 1000 0027899999999999999999999999999999987510
Q ss_pred --------------CceEEee-ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEE-----eec-ccccceeeEEe
Q psy14906 494 --------------PPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIR-----KLS-GHMGQLTDADF 552 (583)
Q Consensus 494 --------------~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-----~~~-~h~~~v~~l~~ 552 (583)
+++..+. +.+.|++++||||| +||+|+.|++|++||++++..+. .+. +|.+.|++++|
T Consensus 552 ~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~F 630 (902)
T 2oaj_A 552 DVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEF 630 (902)
T ss_dssp ECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEE
T ss_pred cccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEE
Confidence 1133444 56799999999999 99999999999999998877653 343 89999999999
Q ss_pred c-----CCC---cEEEEEeCCCeEEEEeC---CCccccccc
Q psy14906 553 S-----PDS---RWLITASMDCTIRVWDI---PSSQLIDCF 582 (583)
Q Consensus 553 s-----~d~---~~l~s~~~d~~i~vw~~---~~~~~~~~~ 582 (583)
+ ||| ++|++++.|++|++||+ .+|+++..|
T Consensus 631 s~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~ 671 (902)
T 2oaj_A 631 VIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQL 671 (902)
T ss_dssp EEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEE
T ss_pred EEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEe
Confidence 9 885 89999999999999999 788876654
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-55 Score=486.19 Aligned_cols=478 Identities=17% Similarity=0.204 Sum_probs=394.8
Q ss_pred eecCCCCCCeEEEEe--eC-eEEEEEcCCeEEEEec-cceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCC
Q psy14906 67 SVSPQHEDDITCLSS--DF-FHIYTSANNIIYAWRR-GIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKA 140 (583)
Q Consensus 67 ~~~~~h~~~v~~~~~--~~-~~~~~~~~~~i~vw~~-~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~ 140 (583)
..+.+|.+.|+++++ ++ .+++++.|++|++||. .++.+..+.+|...|.++ +|+|++|++++.||.|++||+.+
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence 456789999999999 44 5667789999999996 567888999999999997 99999999999999999999999
Q ss_pred CcEEEEeeccCCceEEecccCCcceEEEeeCC--CCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCC
Q psy14906 141 EETYLELSFDNDTFKIMGKRWNSCVNVLEPSP--VVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPP 218 (583)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 218 (583)
++.+..+. +|...|.+++|+| ++.++++|+.|+.|++||+.+++.+..+.+|.+.|++++|+|+++
T Consensus 689 ~~~~~~~~-----------~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~- 756 (1249)
T 3sfz_A 689 GKLVHTYD-----------EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDE- 756 (1249)
T ss_dssp CCEEEEEE-----------CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTT-
T ss_pred CceEEEEc-----------CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCC-
Confidence 99999998 9999999999999 556899999999999999999999999999999999999999999
Q ss_pred EEEEEcCCCcEEEEeCCCCeehhhh------------------------------------------------------h
Q psy14906 219 MMVSGSNTGHLTVWNLEDRQVENQI------------------------------------------------------K 244 (583)
Q Consensus 219 ~l~s~~~dg~i~vwd~~~~~~~~~~------------------------------------------------------~ 244 (583)
++++++.||.|++||+.+++....+ .
T Consensus 757 ~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~ 836 (1249)
T 3sfz_A 757 LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIH 836 (1249)
T ss_dssp EEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEc
Confidence 9999999999999998766432221 1
Q ss_pred hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEc
Q psy14906 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324 (583)
Q Consensus 245 ~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 324 (583)
.+|...|.+++|+|+++++++++.|+.|++|+++ ....+..+.+|...|.+++|+| ++..+++++.||.+++||+
T Consensus 837 ~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~----~~~~~~~~~~h~~~v~~v~~sp-dg~~l~s~s~dg~v~vw~~ 911 (1249)
T 3sfz_A 837 TGHHSTIQYCDFSPYDHLAVIALSQYCVELWNID----SRLKVADCRGHLSWVHGVMFSP-DGSSFLTASDDQTIRVWET 911 (1249)
T ss_dssp CSSSSCCCEEEECSSTTEEEEECSSSCEEEEETT----TTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEH
T ss_pred CCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcC----CCceeeecCCCccceEEEEECC-CCCEEEEEeCCCeEEEEEc
Confidence 2677889999999999999999999999999776 5677888999999999999997 8999999999999999998
Q ss_pred cccccceeeccchhhhhhhhhhcc----------------hhccccccCCCccceeeeecccccccccEEEEecCCceEE
Q psy14906 325 KSETSNKNLGIASANRNNLKRKNR----------------LEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVS 388 (583)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 388 (583)
.+...................... ............+....++ .....++++..++.+.
T Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-----p~g~~l~~g~~~g~i~ 986 (1249)
T 3sfz_A 912 KKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLS-----PHLEYVAFGDEDGAIK 986 (1249)
T ss_dssp HHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEEC-----TTSSEEEEEETTSCCE
T ss_pred cccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEc-----CCCCEEEEEcCCCCEE
Confidence 764332211100000000000000 0000000011112222222 2356888899999999
Q ss_pred EeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEe
Q psy14906 389 LWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSD 468 (583)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s 468 (583)
+|+........ ....|...+.+++|+|+++++++++.||.|++||+.+++.... ..|...|.+++|+
T Consensus 987 i~d~~~~~~~~-------~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~------~~~~~~v~~~~~~ 1053 (1249)
T 3sfz_A 987 IIELPNNRVFS-------SGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFL------QAHQETVKDFRLL 1053 (1249)
T ss_dssp EEETTTTSCEE-------ECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECC------BCCSSCEEEEEEC
T ss_pred EEEcCCCceee-------ecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEE------ecCCCcEEEEEEc
Confidence 99998754322 1224557899999999999999999999999999999887643 4899999999999
Q ss_pred CCCcEEEEeecCCcEEEEEccCCCCCceEEee-ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccce
Q psy14906 469 NLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQL 547 (583)
Q Consensus 469 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v 547 (583)
|++. +++++.||.|++||+.++ +....+. +...|.+++|+|+++++++++.|+.|++||+.+++.+..+.+|...|
T Consensus 1054 ~~~~-l~~~~~dg~v~vwd~~~~--~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~~h~~~v 1130 (1249)
T 3sfz_A 1054 QDSR-LLSWSFDGTVKVWNVITG--RIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELKGHNGCV 1130 (1249)
T ss_dssp SSSE-EEEEESSSEEEEEETTTT--CCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCCCCSSCE
T ss_pred CCCc-EEEEECCCcEEEEECCCC--ceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeeccCCCcE
Confidence 9764 778899999999999998 7777766 45789999999999999999999999999999999999999999999
Q ss_pred eeEEecCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 548 TDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 548 ~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
++++|+||+++|++++.||.|++||+.+++++..+
T Consensus 1131 ~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~~ 1165 (1249)
T 3sfz_A 1131 RCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHSC 1165 (1249)
T ss_dssp EEEEECSSSSEEEEEETTSCCCEEESSSSCCCCCC
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEe
Confidence 99999999999999999999999999999887654
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-54 Score=445.33 Aligned_cols=458 Identities=12% Similarity=0.094 Sum_probs=369.3
Q ss_pred CCCCCeEEEEe--eCeEEEEEcCCeEEEEecc-c----eeeeeecccCcc-EEEE--cc--CCCEEEEEeCCCcEEEEEc
Q psy14906 71 QHEDDITCLSS--DFFHIYTSANNIIYAWRRG-I----DIVGTYKGHTSP-VHLI--LP--FGPHLISVDEESNVKVWDI 138 (583)
Q Consensus 71 ~h~~~v~~~~~--~~~~~~~~~~~~i~vw~~~-~----~~~~~~~~h~~~-v~~i--s~--~~~~l~s~~~dg~i~iwd~ 138 (583)
.|.+.|.++++ ++++++.+.++.|++||+. + +....+.+|... |+++ +| ++++|++++.||.|++||+
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~ 95 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGW 95 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEE
T ss_pred CccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeC
Confidence 58899999888 5677777779999999975 5 688899999999 9997 99 9999999999999999999
Q ss_pred CCC--------cEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC----CeEEEEEccCCceeEEEeccCCC
Q psy14906 139 KAE--------ETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN----KKIILHNILTDESLMEFIQTWGP 206 (583)
Q Consensus 139 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----~~i~iw~~~~~~~~~~~~~~~~~ 206 (583)
.++ +.+..+. .|...|.+++|+|++++|++++.+ +.|++|| +++.+..+.+|...
T Consensus 96 ~~~~~~~~~~~~~~~~~~-----------~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~ 162 (615)
T 1pgu_A 96 TFDKESNSVEVNVKSEFQ-----------VLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQR 162 (615)
T ss_dssp EEEGGGTEEEEEEEEEEE-----------CCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSC
T ss_pred CCCcccccccccccchhh-----------cccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCcc
Confidence 855 5556665 789999999999999999999987 6888888 67888999999999
Q ss_pred eEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhcccc---ceEEEEEecC-CCEEEEEeCCCeEEEEEccCCCC
Q psy14906 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRK---VVTGAHFLYN-EPLLVTSSPDNTLKLWIFDKADG 282 (583)
Q Consensus 207 v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~s~~~d~~i~~w~~~~~~~ 282 (583)
|.+++|+|+++.++++++.|+.|++||+.+++.+..+ .+|.. .|.+++|+|+ +++|++++.|+.|++||+.
T Consensus 163 v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~---- 237 (615)
T 1pgu_A 163 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASD-RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK---- 237 (615)
T ss_dssp EEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEE-CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT----
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeee-cccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC----
Confidence 9999999999878999999999999999999999888 78988 9999999999 9999999999999999765
Q ss_pred CceeeEEe-c---cCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCC
Q psy14906 283 NGRLLRIR-E---GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFIL 358 (583)
Q Consensus 283 ~~~~~~~~-~---~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (583)
.++.+..+ . .|...|.+++|+ ++.+|++++.|+.|++||+.+++....+....... .
T Consensus 238 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~-----------------~ 298 (615)
T 1pgu_A 238 SGEFLKYIEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQL-----------------G 298 (615)
T ss_dssp TCCEEEECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCG-----------------G
T ss_pred CCCEeEEecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcc-----------------c
Confidence 45667777 5 899999999998 78999999999999999999887766553221000 0
Q ss_pred CccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecc--------------------------cccccCC
Q psy14906 359 PPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPE--------------------------RCKQAKQ 412 (583)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~ 412 (583)
.......+. ....++++..++.+++|+.............. .....+.
T Consensus 299 ~~~~~~~~~------~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~ 372 (615)
T 1pgu_A 299 NQQVGVVAT------GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHS 372 (615)
T ss_dssp GCEEEEEEE------ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCC
T ss_pred CceeEEEeC------CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCccc
Confidence 000111110 24455666666666666665432211100000 0003345
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCc----------------------------------cccccCCCCCCCc
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGA----------------------------------HRGSYGHDNQPGH 458 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~----------------------------------~~~~~~~~~~~~h 458 (583)
..+.++++ ++++.+++++.|+.|++|++.+++ ....+ .|
T Consensus 373 ~~v~~~~~-~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 445 (615)
T 1pgu_A 373 NLIVSLDN-SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSV------RL 445 (615)
T ss_dssp SCEEEEEC-CSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEE------EC
T ss_pred CceEEEEE-CCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeec------cc
Confidence 67777888 567788888888888888876432 22222 36
Q ss_pred ccCeeEEEEeCCCcEEEEeec-CCcEEEEEccCCCCCce-EE-eeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccc
Q psy14906 459 VGGVRGVVSDNLNQIVISGGN-DQTVKVWHFKQTGKPPL-RS-IKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT 535 (583)
Q Consensus 459 ~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~-~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 535 (583)
...+.+++|+ +++|++++. |+.|++||+.+. +.. .. ..+...|.+++|+|++++|++++.||.|++||+.+++
T Consensus 446 ~~~~~~~~~~--~~~l~~~~~~d~~i~~~~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 521 (615)
T 1pgu_A 446 NSPGSAVSLS--QNYVAVGLEEGNTIQVFKLSDL--EVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE 521 (615)
T ss_dssp SSCEEEEEEC--SSEEEEEETTTSCEEEEETTEE--EEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCceEEEEc--CCEEEEeecCCCeEEEEECCCc--cccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc
Confidence 7889999998 889999999 999999999886 443 22 2355789999999999999999999999999999999
Q ss_pred eEEeecc-cccceeeEEecC----------CCcEEEEEeCCCeEEEEeCCCc-cccccc
Q psy14906 536 IIRKLSG-HMGQLTDADFSP----------DSRWLITASMDCTIRVWDIPSS-QLIDCF 582 (583)
Q Consensus 536 ~~~~~~~-h~~~v~~l~~s~----------d~~~l~s~~~d~~i~vw~~~~~-~~~~~~ 582 (583)
.+..+.+ |...|++++|+| ++++|++++.|+.|++||+.++ +++..+
T Consensus 522 ~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 580 (615)
T 1pgu_A 522 VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKAL 580 (615)
T ss_dssp EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEET
T ss_pred ceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhh
Confidence 9999988 999999999999 9999999999999999999987 666554
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-50 Score=428.37 Aligned_cols=462 Identities=12% Similarity=0.118 Sum_probs=370.5
Q ss_pred eecCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEee--C-eEEEEEcCCeEEEEec-ccee
Q psy14906 28 VSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSD--F-FHIYTSANNIIYAWRR-GIDI 103 (583)
Q Consensus 28 ~~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~--~-~~~~~~~~~~i~vw~~-~~~~ 103 (583)
-.+.-..+++|+|+++. +++++.++.|++||+.+++.+..+.+|..+|++++|+ + .+++++.|+.|++||. +++.
T Consensus 11 ~h~~~v~~i~~sp~~~~-la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~ 89 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPW-VLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK 89 (814)
T ss_dssp EECSCEEEEEECSSSSE-EEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE
T ss_pred cCCCceEEEEECCCCCE-EEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 34566788999998765 4555589999999999999999999999999999984 3 5777889999999996 5678
Q ss_pred eeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCC-cEEEEeeccCCceEEecccCCcceEEEeeCC-CCCEEEE
Q psy14906 104 VGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAE-ETYLELSFDNDTFKIMGKRWNSCVNVLEPSP-VVDIIGV 179 (583)
Q Consensus 104 ~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~ 179 (583)
+..+.+|...|+++ +|++++|++++.||.|++||+.++ .....+. +|...|.+++|+| +++.|++
T Consensus 90 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-----------~~~~~v~~~~~~p~~~~~l~~ 158 (814)
T 3mkq_A 90 VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE-----------GHEHFVMCVAFNPKDPSTFAS 158 (814)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE-----------CCSSCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc-----------CCCCcEEEEEEEcCCCCEEEE
Confidence 88999999999997 999999999999999999999987 5566666 8899999999999 8999999
Q ss_pred EecCCeEEEEEccCCceeEEEeccC-CCeEEEEEec--CCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEE
Q psy14906 180 GLSNKKIILHNILTDESLMEFIQTW-GPVTALSFRT--DGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF 256 (583)
Q Consensus 180 ~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~ 256 (583)
++.||.|++||+.+++....+..+. ..+.+++|+| +++ ++++++.||.|++||+.+++.+..+ .+|...|.+++|
T Consensus 159 ~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~v~~~~~ 236 (814)
T 3mkq_A 159 GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP-YMITASDDLTIKIWDYQTKSCVATL-EGHMSNVSFAVF 236 (814)
T ss_dssp EETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCC-EEEEECTTSEEEEEETTTTEEEEEE-ECCSSCEEEEEE
T ss_pred EeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCC-EEEEEeCCCEEEEEECCCCcEEEEE-cCCCCCEEEEEE
Confidence 9999999999999888888877654 8999999999 888 8999999999999999999998888 789999999999
Q ss_pred ecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCC-EEEEeeCCCcEEEEEccccccceeecc
Q psy14906 257 LYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSD-NILSAAGDSTLRIFNTKSETSNKNLGI 335 (583)
Q Consensus 257 ~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~ 335 (583)
+|++++|++++.||.|++|++. ..+.+..+..|...+.+++|+| ++. .+++.+.++.+.+|++........+..
T Consensus 237 ~~~~~~l~~~~~dg~v~vwd~~----~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (814)
T 3mkq_A 237 HPTLPIIISGSEDGTLKIWNSS----TYKVEKTLNVGLERSWCIATHP-TGRKNYIASGFDNGFTVLSLGNDEPTLSLDP 311 (814)
T ss_dssp CSSSSEEEEEETTSCEEEEETT----TCSEEEEECCSSSSEEEEEECT-TCGGGEEEEEETTEEEEEECSCCSCCEEECS
T ss_pred cCCCCEEEEEeCCCeEEEEECC----CCcEEEEeecCCCcEEEEEEcc-CCCceEEEEEeCCCEEEEEcCCCCceeEECC
Confidence 9999999999999999999765 4677888888999999999998 554 345555677899999876543322211
Q ss_pred chhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCc---eEE------EeecCcccccceeeeccc
Q psy14906 336 ASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKN---KVS------LWSFYKSKMDDMFLVPER 406 (583)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~------~~~~~~~~~~~~~~~~~~ 406 (583)
. ...++....+. .+. .|+....... .....
T Consensus 312 ~--------------------------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 350 (814)
T 3mkq_A 312 V--------------------------------------GKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPL---SLQTK 350 (814)
T ss_dssp S--------------------------------------SEEEEECCTTSCTTCEEEEECCSCCCCCSSSCB---CCCCE
T ss_pred C--------------------------------------CCEEEECcccccceeeeeeecccccccccCccc---eeeee
Confidence 0 11111111110 000 0111111110 00111
Q ss_pred ccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEE
Q psy14906 407 CKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486 (583)
Q Consensus 407 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iw 486 (583)
....+...+.+++|+|+|+++++++ +|.+.+|++.... ..+.+.+.+++|+|+++++++++.+|.|++|
T Consensus 351 ~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~----------~~~~~~i~~~~~spdg~~la~~~~~g~v~l~ 419 (814)
T 3mkq_A 351 ELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWR----------NKAFGKCQDFVWGPDSNSYALIDETGQIKYY 419 (814)
T ss_dssp EECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTE----------EEEEEECSEEEECTTSSCEEEECTTCCEEEE
T ss_pred cCCCCccCCceeEECCCCCEEEEec-CCEEEEEECcccc----------ccCCCceEEEEEeCCCCeEEEEeCCCcEEEE
Confidence 1122335789999999999999998 8999999975322 2456789999999999999999999999999
Q ss_pred EccCCCCCceEEeeccCCeeeEEeccCC---cEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEE-
Q psy14906 487 HFKQTGKPPLRSIKLDNGISFFRTHQES---SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITA- 562 (583)
Q Consensus 487 d~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~- 562 (583)
+... .+...+.++.|+|++ .+|++++.|+.|++||+.+++.+..+..|.. .++|+|||++|+++
T Consensus 420 ~~~~---------~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~---~v~~s~dg~~la~~~ 487 (814)
T 3mkq_A 420 KNFK---------EVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRIDVNAK---DVIWSDNGELVMIVN 487 (814)
T ss_dssp ETTE---------ECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEESSCEE---EEEECTTSSEEEEEE
T ss_pred ECCC---------CccceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEEEecCCC---EEEEcCCCCEEEEEE
Confidence 6432 234578899999998 6889999999999999999999999988765 89999999999999
Q ss_pred -----eCCCeEEEEe
Q psy14906 563 -----SMDCTIRVWD 572 (583)
Q Consensus 563 -----~~d~~i~vw~ 572 (583)
+.+..+.+|.
T Consensus 488 ~~~~~~~~~~~~~~~ 502 (814)
T 3mkq_A 488 TNSNGDEASGYTLLF 502 (814)
T ss_dssp CCCSSCSCSEEEEEE
T ss_pred cCcccCCceEEEEEe
Confidence 6666555554
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-49 Score=419.37 Aligned_cols=442 Identities=14% Similarity=0.145 Sum_probs=355.8
Q ss_pred EEEeecCCCCCCeEEEEee--C-eEEEEEcCCeEEEEec-cceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEE
Q psy14906 64 KLLSVSPQHEDDITCLSSD--F-FHIYTSANNIIYAWRR-GIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWD 137 (583)
Q Consensus 64 ~~~~~~~~h~~~v~~~~~~--~-~~~~~~~~~~i~vw~~-~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd 137 (583)
+..+.+.+|.+.|++++++ + .+++++.+|.|++||. .++.+..+.+|..+|.++ +|++++|++++.||.|++||
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 3456678899999999994 4 4667778999999996 678889999999999997 99999999999999999999
Q ss_pred cCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCC-ceeEEEeccCCCeEEEEEec-C
Q psy14906 138 IKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD-ESLMEFIQTWGPVTALSFRT-D 215 (583)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~-~~~~~~~~~~~~v~~~~~~~-~ 215 (583)
+.+++.+..+. .|...|.+++|+|++++|++++.||.|++||+.++ .....+.+|...|.+++|+| +
T Consensus 84 ~~~~~~~~~~~-----------~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 152 (814)
T 3mkq_A 84 YNTGEKVVDFE-----------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKD 152 (814)
T ss_dssp TTTCCEEEEEE-----------CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTE
T ss_pred CCCCcEEEEEe-----------cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCC
Confidence 99999999987 89999999999999999999999999999999987 67778889999999999999 6
Q ss_pred CCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEec--CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC
Q psy14906 216 GPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLY--NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH 293 (583)
Q Consensus 216 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~ 293 (583)
+. ++++++.||.|++||+.+++....+...+...+.+++|+| ++++|++++.|+.|++|++. ....+..+.+|
T Consensus 153 ~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~----~~~~~~~~~~~ 227 (814)
T 3mkq_A 153 PS-TFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ----TKSCVATLEGH 227 (814)
T ss_dssp EE-EEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT----TTEEEEEEECC
T ss_pred CC-EEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC----CCcEEEEEcCC
Confidence 77 8999999999999999988887777445558999999999 99999999999999999765 46778888999
Q ss_pred CCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccc
Q psy14906 294 SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKD 373 (583)
Q Consensus 294 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (583)
...|.+++|+| ++.++++++.||.|++||+.+++....+... ...+..+.+. ++
T Consensus 228 ~~~v~~~~~~~-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~---------------------~~~v~~~~~~----~~ 281 (814)
T 3mkq_A 228 MSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEKTLNVG---------------------LERSWCIATH----PT 281 (814)
T ss_dssp SSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCSEEEEECCS---------------------SSSEEEEEEC----TT
T ss_pred CCCEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEeecC---------------------CCcEEEEEEc----cC
Confidence 99999999998 8999999999999999999987765544211 1122222222 22
Q ss_pred cccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCce---EEE------EEcccC
Q psy14906 374 WNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGH---VDR------FNIQSG 444 (583)
Q Consensus 374 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~---i~i------~d~~~~ 444 (583)
...++.+...++.+.+|+... ....+.++|+++.+++++.+.. +.. |++..+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (814)
T 3mkq_A 282 GRKNYIASGFDNGFTVLSLGN-------------------DEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQD 342 (814)
T ss_dssp CGGGEEEEEETTEEEEEECSC-------------------CSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSS
T ss_pred CCceEEEEEeCCCEEEEEcCC-------------------CCceeEECCCCCEEEECcccccceeeeeeecccccccccC
Confidence 233333344455677777643 2446778899988888765542 221 222222
Q ss_pred ccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCc
Q psy14906 445 AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDF 524 (583)
Q Consensus 445 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 524 (583)
...... ......+...+.+++|+|+++++++++ |+.+.+|++... . ....+.+.+++|+|+++++|+++.++
T Consensus 343 ~~~~~~-~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~--~----~~~~~~i~~~~~spdg~~la~~~~~g 414 (814)
T 3mkq_A 343 EPLSLQ-TKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAW--R----NKAFGKCQDFVWGPDSNSYALIDETG 414 (814)
T ss_dssp SCBCCC-CEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTT--E----EEEEEECSEEEECTTSSCEEEECTTC
T ss_pred ccceee-eecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECccc--c----ccCCCceEEEEEeCCCCeEEEEeCCC
Confidence 222111 000135667899999999999999988 899999997643 1 22345788999999999999999999
Q ss_pred eEEEEEccccceEEeecccccceeeEEecCCC---cEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 525 TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDS---RWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 525 ~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~---~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
.|++|+ .+.+|...+.+++|+||+ .+|++++.|+.|++||+.+++++..+
T Consensus 415 ~v~l~~--------~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~~v~~~d~~~~~~~~~~ 467 (814)
T 3mkq_A 415 QIKYYK--------NFKEVTSWSVPMHSAIDRLFSGALLGVKSDGFVYFFDWDNGTLVRRI 467 (814)
T ss_dssp CEEEEE--------TTEECTTCCCCCSSCCCEEECSSSEEEEETTEEEEECTTTCCEEEEE
T ss_pred cEEEEE--------CCCCccceEEcCCcCccceecceEEEEecCCEEEEEECCcCcEEEEE
Confidence 999996 345688889999999998 68899999999999999999988765
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=360.53 Aligned_cols=293 Identities=17% Similarity=0.315 Sum_probs=263.9
Q ss_pred CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEE
Q psy14906 194 DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLK 273 (583)
Q Consensus 194 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~ 273 (583)
.+....+.+|.+.|++++|+|+++ +|++++.||+|++||+.+++.+..+ ..|...|.+++|+|++++|++++.|+.++
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~-~l~s~s~Dg~v~iWd~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~~d~~v~ 122 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSR-LLLSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNYVACGGLDNICS 122 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSS-EEEEEETTTEEEEEETTTCCEEEEE-ECSSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred chhheeecCCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCCcceEe-ecCCccEEEEEECCCCCEEEEEeCCCeEE
Confidence 355678899999999999999999 9999999999999999999988888 78999999999999999999999999999
Q ss_pred EEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 274 LWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 274 ~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
+|++............+.+|...|.++.|++ ++ .+++++.|++|++||+.+++....+
T Consensus 123 iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~-~l~s~s~d~~i~~wd~~~~~~~~~~-------------------- 180 (340)
T 1got_B 123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLD-DN-QIVTSSGDTTCALWDIETGQQTTTF-------------------- 180 (340)
T ss_dssp EEETTTCSBSCEEEEEEECCSSCEEEEEEEE-TT-EEEEEETTSCEEEEETTTTEEEEEE--------------------
T ss_pred EEECccCCCcceeEEEecCCCccEEEEEECC-CC-cEEEEECCCcEEEEECCCCcEEEEE--------------------
Confidence 9987655444566778889999999999986 44 6999999999999999887554332
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 433 (583)
..|...+.+++|+|+++++++|+.|
T Consensus 181 -------------------------------------------------------~~h~~~v~~~~~~~~~~~l~sg~~d 205 (340)
T 1got_B 181 -------------------------------------------------------TGHTGDVMSLSLAPDTRLFVSGACD 205 (340)
T ss_dssp -------------------------------------------------------CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred -------------------------------------------------------cCCCCceEEEEECCCCCEEEEEeCC
Confidence 1122679999999999999999999
Q ss_pred ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc---CCeeeEEe
Q psy14906 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD---NGISFFRT 510 (583)
Q Consensus 434 g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~~~~~ 510 (583)
|.|++||+.++.....+ .+|...|++++|+|++++|++++.||+|++||+... +.+..+.+. ..+.+++|
T Consensus 206 ~~v~~wd~~~~~~~~~~-----~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~--~~~~~~~~~~~~~~v~~~~~ 278 (340)
T 1got_B 206 ASAKLWDVREGMCRQTF-----TGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD--QELMTYSHDNIICGITSVSF 278 (340)
T ss_dssp SCEEEEETTTCSEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEEEECCTTCCSCEEEEEE
T ss_pred CcEEEEECCCCeeEEEE-----cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC--cEEEEEccCCcccceEEEEE
Confidence 99999999999988888 799999999999999999999999999999999987 666666554 37999999
Q ss_pred ccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEe
Q psy14906 511 HQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 511 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~ 572 (583)
+|+|++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+||+++|++++.|++|++||
T Consensus 279 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 279 SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999997
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-48 Score=370.37 Aligned_cols=304 Identities=20% Similarity=0.330 Sum_probs=261.6
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
+|..+|++++|+|++++|++|+.||+|++||+.+++....+.+|...|.+++|+|+++ +|++|+.|++|++||+.++++
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~-~l~sgs~D~~i~iwd~~~~~~ 184 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFEC 184 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSS-EEEEEETTSCCCEEETTSSCE
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCce
Confidence 8999999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
+..+ .+|...|.+++|+|++++|++++.|++|++||+. .+..+..+.+|...|.++.++| ++.+|++++.|++|
T Consensus 185 ~~~~-~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~----~~~~~~~~~~h~~~v~~~~~~~-~g~~l~s~s~D~~v 258 (410)
T 1vyh_C 185 IRTM-HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ----TGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTV 258 (410)
T ss_dssp EECC-CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred eEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC----CCcEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCeE
Confidence 9888 7999999999999999999999999999999775 4677888999999999999997 89999999999999
Q ss_pred EEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 320 RIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 320 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
++||+.++.....+
T Consensus 259 ~vwd~~~~~~~~~~------------------------------------------------------------------ 272 (410)
T 1vyh_C 259 RVWVVATKECKAEL------------------------------------------------------------------ 272 (410)
T ss_dssp EEEETTTCCEEEEE------------------------------------------------------------------
T ss_pred EEEECCCCceeeEe------------------------------------------------------------------
Confidence 99999876543322
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN 479 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 479 (583)
..|...+.+++|+|++.+...... .+ .......+.+.+|++++.
T Consensus 273 ---------~~h~~~v~~~~~~~~~~~~~~~~~-----------------------~~----~~~~~~~~~g~~l~sgs~ 316 (410)
T 1vyh_C 273 ---------REHRHVVECISWAPESSYSSISEA-----------------------TG----SETKKSGKPGPFLLSGSR 316 (410)
T ss_dssp ---------CCCSSCEEEEEECCSCGGGGGGGC-----------------------CS----CC-------CCEEEEEET
T ss_pred ---------cCCCceEEEEEEcCcccccchhhh-----------------------cc----ccccccCCCCCEEEEEeC
Confidence 012256788888887643111000 00 011122345789999999
Q ss_pred CCcEEEEEccCCCCCceEEee-ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcE
Q psy14906 480 DQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558 (583)
Q Consensus 480 dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~ 558 (583)
|+.|++||+.++ .++..+. |...|.+++|+|+|++|++|+.|+.|++||+.+++++..+.+|...|++++|+|++++
T Consensus 317 D~~i~iwd~~~~--~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 394 (410)
T 1vyh_C 317 DKTIKMWDVSTG--MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 394 (410)
T ss_dssp TSEEEEEETTTT--EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSC
T ss_pred CCeEEEEECCCC--ceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCE
Confidence 999999999988 7777665 4568999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCeEEEEeCC
Q psy14906 559 LITASMDCTIRVWDIP 574 (583)
Q Consensus 559 l~s~~~d~~i~vw~~~ 574 (583)
|++|+.|++|++|+++
T Consensus 395 l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 395 VVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEEETTSEEEEEC--
T ss_pred EEEEeCCCcEEEEeCC
Confidence 9999999999999863
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-48 Score=370.07 Aligned_cols=316 Identities=18% Similarity=0.261 Sum_probs=271.7
Q ss_pred CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEE
Q psy14906 184 KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLL 263 (583)
Q Consensus 184 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 263 (583)
..+..|+.....+...+.+|.+.|++++|+|+++ +|++|+.||+|++||+.+++....+ ..|...|.+++|+|++++|
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~-~l~s~s~D~~v~iWd~~~~~~~~~~-~~h~~~v~~~~~s~~g~~l 123 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKN-WIVSASQDGRLIVWNALTSQKTHAI-KLHCPWVMECAFAPNGQSV 123 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSS-CEEEEETTSEEEEEETTTTEEEEEE-ECCCTTCCCCEECTTSSEE
T ss_pred ccccccccceeEEeecccccccEEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCccceEE-ecCCCCEEEEEECCCCCEE
Confidence 3455677777788889999999999999999998 8999999999999999999999888 7899999999999999999
Q ss_pred EEEeCCCeEEEEEccCCC---CCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhh
Q psy14906 264 VTSSPDNTLKLWIFDKAD---GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANR 340 (583)
Q Consensus 264 ~s~~~d~~i~~w~~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 340 (583)
++++.|+.+++|++.... +.......+.+|...+.++.|.|.++..|++++.|++|++||+.+++....+..
T Consensus 124 as~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~----- 198 (380)
T 3iz6_a 124 ACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGS----- 198 (380)
T ss_dssp EECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECC-----
T ss_pred EEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeec-----
Confidence 999999999999875321 123345667899999999999986677899999999999999988765443311
Q ss_pred hhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEE
Q psy14906 341 NNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYI 420 (583)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 420 (583)
.....|...+.++++
T Consensus 199 -----------------------------------------------------------------~~~~~h~~~v~~~~~ 213 (380)
T 3iz6_a 199 -----------------------------------------------------------------EFPSGHTADVLSLSI 213 (380)
T ss_dssp -----------------------------------------------------------------CSSSSCCSCEEEEEE
T ss_pred -----------------------------------------------------------------ccCCCCccCeEEEEe
Confidence 011223367889999
Q ss_pred cc-CCcEEEEEecCceEEEEEcc-cCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEE
Q psy14906 421 TH-CGNFVLIGYSSGHVDRFNIQ-SGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS 498 (583)
Q Consensus 421 s~-~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 498 (583)
++ +++++++|+.||.|++||++ .+.....+ .+|...|++++|+|++++|++++.||+|++||+.++ ..+..
T Consensus 214 ~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~-----~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~--~~~~~ 286 (380)
T 3iz6_a 214 NSLNANMFISGSCDTTVRLWDLRITSRAVRTY-----HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG--HQLQV 286 (380)
T ss_dssp CSSSCCEEEEEETTSCEEEEETTTTCCCCEEE-----CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT--EEEEE
T ss_pred ecCCCCEEEEEECCCeEEEEECCCCCcceEEE-----CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC--cEEEE
Confidence 77 78999999999999999997 44666666 789999999999999999999999999999999987 66665
Q ss_pred eecc--------CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEee----cccccceeeEEecCCCcEEEEEeCCC
Q psy14906 499 IKLD--------NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKL----SGHMGQLTDADFSPDSRWLITASMDC 566 (583)
Q Consensus 499 ~~~~--------~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----~~h~~~v~~l~~s~d~~~l~s~~~d~ 566 (583)
+... ..+.+++|+|+|++|++|+.||.|++||+.+++.+..+ .+|.+.|++++|+|||++|++|+.|+
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~ 366 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK 366 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS
T ss_pred ecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC
Confidence 5432 24899999999999999999999999999999888776 68999999999999999999999999
Q ss_pred eEEEEeCCCccc
Q psy14906 567 TIRVWDIPSSQL 578 (583)
Q Consensus 567 ~i~vw~~~~~~~ 578 (583)
+|++|++..++.
T Consensus 367 ~i~iW~~~~~~~ 378 (380)
T 3iz6_a 367 NLKIWAFSGHRK 378 (380)
T ss_dssp CEEEEECCSSSS
T ss_pred CEEEEecCCCcc
Confidence 999999987654
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-47 Score=351.34 Aligned_cols=284 Identities=14% Similarity=0.193 Sum_probs=241.8
Q ss_pred cCCcceEEEeeCCC----CCEEEEEecCCeEEEEEccCCce--eEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q psy14906 160 RWNSCVNVLEPSPV----VDIIGVGLSNKKIILHNILTDES--LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWN 233 (583)
Q Consensus 160 ~~~~~i~~~~~s~~----~~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 233 (583)
+|.+.|.+++|+|+ +++|++|+.|++|++|++.+++. ...+.+|...|.+++|+++++ ++++++.|++|++||
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~-~l~s~s~D~~i~lWd 108 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLP-IAASSSLDAHIRLWD 108 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSS-EEEEEETTSEEEEEE
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCC-EEEEEeCCCcEEEEE
Confidence 89999999999985 67999999999999999987754 456789999999999999998 999999999999999
Q ss_pred CCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEe
Q psy14906 234 LEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSA 313 (583)
Q Consensus 234 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 313 (583)
+.+++.+..+ ..|...+.+++|+|++++|++++.|+.+++|+++ ..+....+..|...+.+++|+| ++++|+++
T Consensus 109 ~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~----~~~~~~~~~~~~~~v~~~~~sp-dg~~lasg 182 (321)
T 3ow8_A 109 LENGKQIKSI-DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVE----SGKKEYSLDTRGKFILSIAYSP-DGKYLASG 182 (321)
T ss_dssp TTTTEEEEEE-ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETT----TCSEEEEEECSSSCEEEEEECT-TSSEEEEE
T ss_pred CCCCCEEEEE-eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcC----CCceeEEecCCCceEEEEEECC-CCCEEEEE
Confidence 9999998888 7888899999999999999999999999999765 3344445555555566666654 55555555
Q ss_pred eCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecC
Q psy14906 314 AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFY 393 (583)
Q Consensus 314 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 393 (583)
+.||.|++||+.
T Consensus 183 ~~dg~i~iwd~~-------------------------------------------------------------------- 194 (321)
T 3ow8_A 183 AIDGIINIFDIA-------------------------------------------------------------------- 194 (321)
T ss_dssp ETTSCEEEEETT--------------------------------------------------------------------
T ss_pred cCCCeEEEEECC--------------------------------------------------------------------
Confidence 555555555544
Q ss_pred cccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcE
Q psy14906 394 KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQI 473 (583)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 473 (583)
+++.+..+ .+|...|++++|+|++++
T Consensus 195 -------------------------------------------------~~~~~~~~-----~~h~~~v~~l~~spd~~~ 220 (321)
T 3ow8_A 195 -------------------------------------------------TGKLLHTL-----EGHAMPIRSLTFSPDSQL 220 (321)
T ss_dssp -------------------------------------------------TTEEEEEE-----CCCSSCCCEEEECTTSCE
T ss_pred -------------------------------------------------CCcEEEEE-----cccCCceeEEEEcCCCCE
Confidence 44444444 678899999999999999
Q ss_pred EEEeecCCcEEEEEccCCCCCceEEee-ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEe
Q psy14906 474 VISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADF 552 (583)
Q Consensus 474 l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~ 552 (583)
|++++.|+.|++||+... .....+. +...|.+++|+|++++|++++.|+.|++||+.+++++..+.+|...|.+++|
T Consensus 221 l~s~s~dg~i~iwd~~~~--~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~ 298 (321)
T 3ow8_A 221 LVTASDDGYIKIYDVQHA--NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKY 298 (321)
T ss_dssp EEEECTTSCEEEEETTTC--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEEEcCCCeEEEEECCCc--ceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEE
Confidence 999999999999999987 7776665 4468999999999999999999999999999999999999999999999999
Q ss_pred cCCCcEEEEEeCCCeEEEEeCC
Q psy14906 553 SPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 553 s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
+|++++|++++.|++|++||..
T Consensus 299 s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 299 NGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CTTSSEEEEEETTCCEEEEECC
T ss_pred CCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999964
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=369.60 Aligned_cols=299 Identities=19% Similarity=0.264 Sum_probs=268.3
Q ss_pred EEEEeccceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeC
Q psy14906 94 IYAWRRGIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPS 171 (583)
Q Consensus 94 i~vw~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 171 (583)
...|.........+.+|..+|+++ +|++++|++|+.||+|++||+.+++....+. +|...|.+++|+
T Consensus 91 ~~~~~~~~~~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~-----------~h~~~V~~v~~~ 159 (410)
T 1vyh_C 91 PKEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----------GHTDSVQDISFD 159 (410)
T ss_dssp -CCCCCCSSCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC-----------CCSSCEEEEEEC
T ss_pred ccccccCCCceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-----------ccCCcEEEEEEc
Confidence 344554444566788999999997 9999999999999999999999999998887 999999999999
Q ss_pred CCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccce
Q psy14906 172 PVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVV 251 (583)
Q Consensus 172 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v 251 (583)
|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|+++ +|++|+.|++|++||+.+++++..+ .+|...|
T Consensus 160 ~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~~~~~~~~-~~h~~~v 237 (410)
T 1vyh_C 160 HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGYCVKTF-TGHREWV 237 (410)
T ss_dssp TTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEEEE-ECCSSCE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCcEEEEE-eCCCccE
Confidence 9999999999999999999999999999999999999999999998 8999999999999999999999888 7999999
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC-------------------CCEEEE
Q psy14906 252 TGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS-------------------SDNILS 312 (583)
Q Consensus 252 ~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------------------~~~l~~ 312 (583)
.++.|+|++++|++++.|+.|++|++. .......+.+|...|.+++|+|.. +.+|++
T Consensus 238 ~~~~~~~~g~~l~s~s~D~~v~vwd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~s 313 (410)
T 1vyh_C 238 RMVRPNQDGTLIASCSNDQTVRVWVVA----TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 313 (410)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECC----CCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEE
Confidence 999999999999999999999999775 456777889999999999999732 568999
Q ss_pred eeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeec
Q psy14906 313 AAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSF 392 (583)
Q Consensus 313 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 392 (583)
++.|++|++||+.++.+...+
T Consensus 314 gs~D~~i~iwd~~~~~~~~~~----------------------------------------------------------- 334 (410)
T 1vyh_C 314 GSRDKTIKMWDVSTGMCLMTL----------------------------------------------------------- 334 (410)
T ss_dssp EETTSEEEEEETTTTEEEEEE-----------------------------------------------------------
T ss_pred EeCCCeEEEEECCCCceEEEE-----------------------------------------------------------
Confidence 999999999999877554332
Q ss_pred CcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc
Q psy14906 393 YKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472 (583)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 472 (583)
..|...|.+++|+|++++|++|+.||.|++||+.+++....+ .+|...|++++|+|+++
T Consensus 335 ----------------~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~-----~~h~~~v~~l~~~~~~~ 393 (410)
T 1vyh_C 335 ----------------VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL-----NAHEHFVTSLDFHKTAP 393 (410)
T ss_dssp ----------------ECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEE-----ECCSSCEEEEEECSSSS
T ss_pred ----------------ECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEE-----cCCCCcEEEEEEcCCCC
Confidence 112267999999999999999999999999999999988888 78999999999999999
Q ss_pred EEEEeecCCcEEEEEcc
Q psy14906 473 IVISGGNDQTVKVWHFK 489 (583)
Q Consensus 473 ~l~s~~~dg~i~iwd~~ 489 (583)
+|++|+.||+|++|+++
T Consensus 394 ~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 394 YVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CEEEEETTSEEEEEC--
T ss_pred EEEEEeCCCcEEEEeCC
Confidence 99999999999999863
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-46 Score=354.17 Aligned_cols=290 Identities=19% Similarity=0.297 Sum_probs=261.2
Q ss_pred ceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEE
Q psy14906 101 IDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIG 178 (583)
Q Consensus 101 ~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 178 (583)
.+...++.+|.++|+++ +|++++|++++.||+|++||+.+++.+..+. .|...|.+++|+|++++|+
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~-----------~~~~~v~~~~~s~~~~~l~ 113 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP-----------LRSSWVMTCAYAPSGNYVA 113 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-----------CSSSCEEEEEECTTSSEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEee-----------cCCccEEEEEECCCCCEEE
Confidence 35577899999999997 8999999999999999999999999999887 8899999999999999999
Q ss_pred EEecCCeEEEEEccCC----ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEE
Q psy14906 179 VGLSNKKIILHNILTD----ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGA 254 (583)
Q Consensus 179 ~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~ 254 (583)
+|+.|+.|++|++.++ +....+.+|.+.|.++.|++++. +++++.|+.|++||+++++.+..+ .+|...|.++
T Consensus 114 s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~~~~~~~~-~~h~~~v~~~ 190 (340)
T 1got_B 114 CGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIETGQQTTTF-TGHTGDVMSL 190 (340)
T ss_dssp EEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE--EEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEE
T ss_pred EEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc--EEEEECCCcEEEEECCCCcEEEEE-cCCCCceEEE
Confidence 9999999999999875 35566789999999999999884 889999999999999999999888 7999999999
Q ss_pred EEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeec
Q psy14906 255 HFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLG 334 (583)
Q Consensus 255 ~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 334 (583)
+|+|++++|++++.|+.|++||+. .......+.+|...|.+++|+| ++++|++++.||+|++||+++++....+.
T Consensus 191 ~~~~~~~~l~sg~~d~~v~~wd~~----~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 265 (340)
T 1got_B 191 SLAPDTRLFVSGACDASAKLWDVR----EGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYS 265 (340)
T ss_dssp EECTTSSEEEEEETTSCEEEEETT----TCSEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EECCCCCEEEEEeCCCcEEEEECC----CCeeEEEEcCCcCCEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 999999999999999999999765 4567788999999999999998 89999999999999999998765433221
Q ss_pred cchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCC
Q psy14906 335 IASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSK 414 (583)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (583)
.. .....
T Consensus 266 ~~-------------------------------------------------------------------------~~~~~ 272 (340)
T 1got_B 266 HD-------------------------------------------------------------------------NIICG 272 (340)
T ss_dssp CT-------------------------------------------------------------------------TCCSC
T ss_pred cC-------------------------------------------------------------------------Ccccc
Confidence 00 00146
Q ss_pred ceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE
Q psy14906 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 487 (583)
+.+++|+|+++++++|+.||.|++||+.+++....+ .+|...|.+++|+|++++|++++.|+.|++||
T Consensus 273 v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~-----~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 273 ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVL-----AGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-----ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred eEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEe-----ecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 899999999999999999999999999999988888 79999999999999999999999999999996
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-46 Score=348.66 Aligned_cols=292 Identities=16% Similarity=0.263 Sum_probs=259.4
Q ss_pred eeeeeecccCccEEEE--cc----CCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCC
Q psy14906 102 DIVGTYKGHTSPVHLI--LP----FGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD 175 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i--s~----~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 175 (583)
...+.+++|.+.|+++ +| ++++|++|+.|++|++||+.+++......+. +|...|.+++|++++.
T Consensus 23 ~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~---------gh~~~v~~~~~~~~~~ 93 (321)
T 3ow8_A 23 ILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLE---------GHQLGVVSVDISHTLP 93 (321)
T ss_dssp EEEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEEC---------CCSSCEEEEEECSSSS
T ss_pred heeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeec---------cCCCCEEEEEECCCCC
Confidence 4456678999999998 44 4679999999999999999887654332222 8999999999999999
Q ss_pred EEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEE
Q psy14906 176 IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAH 255 (583)
Q Consensus 176 ~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 255 (583)
++++++.|++|++||+.+++.+..+..+...+.+++|+|+++ +|++++.||.|++||+++++....+ ..|...|.+++
T Consensus 94 ~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~~~~~~~~-~~~~~~v~~~~ 171 (321)
T 3ow8_A 94 IAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVESGKKEYSL-DTRGKFILSIA 171 (321)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSS-EEEEECTTSEEEEEETTTCSEEEEE-ECSSSCEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCCCceeEEe-cCCCceEEEEE
Confidence 999999999999999999999999999989999999999999 9999999999999999999888887 68889999999
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeecc
Q psy14906 256 FLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGI 335 (583)
Q Consensus 256 ~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 335 (583)
|+|++++|++++.|+.|++||+. .++.+..+.+|..+|.+++|+| ++++|++++.|+.|++||++++.....+
T Consensus 172 ~spdg~~lasg~~dg~i~iwd~~----~~~~~~~~~~h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~-- 244 (321)
T 3ow8_A 172 YSPDGKYLASGAIDGIINIFDIA----TGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTL-- 244 (321)
T ss_dssp ECTTSSEEEEEETTSCEEEEETT----TTEEEEEECCCSSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCEEEEE--
T ss_pred ECCCCCEEEEEcCCCeEEEEECC----CCcEEEEEcccCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcceeEEE--
Confidence 99999999999999999999765 5678888999999999999998 8999999999999999999876543322
Q ss_pred chhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCc
Q psy14906 336 ASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKP 415 (583)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i 415 (583)
..|...|
T Consensus 245 -------------------------------------------------------------------------~~h~~~v 251 (321)
T 3ow8_A 245 -------------------------------------------------------------------------SGHASWV 251 (321)
T ss_dssp -------------------------------------------------------------------------CCCSSCE
T ss_pred -------------------------------------------------------------------------cCCCCce
Confidence 1122679
Q ss_pred eEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEcc
Q psy14906 416 TCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFK 489 (583)
Q Consensus 416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 489 (583)
.+++|+|++++|++++.|+.|++||+.+++++..+ .+|...|.+++|+|++++|++++.||.|++||..
T Consensus 252 ~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~-----~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 252 LNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF-----FDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE-----cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999999999999999999999888 7899999999999999999999999999999963
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-46 Score=364.25 Aligned_cols=341 Identities=18% Similarity=0.220 Sum_probs=286.8
Q ss_pred CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCC-EEEEEecCCeEEEEEc----cCCc------eeEE
Q psy14906 131 SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD-IIGVGLSNKKIILHNI----LTDE------SLME 199 (583)
Q Consensus 131 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~d~~i~iw~~----~~~~------~~~~ 199 (583)
..+.+|+++......... .|...|.+++|+|+++ +||+|+.||.|++|++ .+++ ....
T Consensus 25 ~~~~~~~~~~~~~~~~~~-----------~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~ 93 (425)
T 1r5m_A 25 SIDSSDDLDGFVKILKEI-----------VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAE 93 (425)
T ss_dssp ---------CCCEECEEE-----------EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEE
T ss_pred cccccccchhhhhheeee-----------eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccc
Confidence 456788887766555544 6779999999999999 9999999999999999 8888 4555
Q ss_pred Eec----------cCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC
Q psy14906 200 FIQ----------TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD 269 (583)
Q Consensus 200 ~~~----------~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 269 (583)
+.. |...|++++|+|+++ +|++++.||.|++|| .+++.+..+ .+|...|.+++|+|++++|++++.|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~~-~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d 170 (425)
T 1r5m_A 94 LRHPFALSASSGKTTNQVTCLAWSHDGN-SIVTGVENGELRLWN-KTGALLNVL-NFHRAPIVSVKWNKDGTHIISMDVE 170 (425)
T ss_dssp EECCCCCC------CBCEEEEEECTTSS-EEEEEETTSCEEEEE-TTSCEEEEE-CCCCSCEEEEEECTTSSEEEEEETT
T ss_pred ccccccccccccCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEe-CCCCeeeec-cCCCccEEEEEECCCCCEEEEEecC
Confidence 554 677999999999999 899999999999999 567777777 7899999999999999999999999
Q ss_pred CeEEEEEccCCCCCceeeEEeccCCCC---------------CeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeec
Q psy14906 270 NTLKLWIFDKADGNGRLLRIREGHSAP---------------PNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLG 334 (583)
Q Consensus 270 ~~i~~w~~~~~~~~~~~~~~~~~~~~~---------------v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 334 (583)
+.+++|++. ..+.+..+..+... +.++.|+| + ..+++++.+|.|++||+.+++....+.
T Consensus 171 ~~i~iwd~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~i~~~d~~~~~~~~~~~ 244 (425)
T 1r5m_A 171 NVTILWNVI----SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-D-DKFVIPGPKGAIFVYQITEKTPTGKLI 244 (425)
T ss_dssp CCEEEEETT----TTEEEEEECCC---------------CCCBSCCEEEE-T-TEEEEECGGGCEEEEETTCSSCSEEEC
T ss_pred CeEEEEECC----CCcEEEEeeccccCccceeeccccCCcceeeEEEEcC-C-CEEEEEcCCCeEEEEEcCCCceeeeec
Confidence 999999775 45677777777666 99999997 3 578999999999999998765443321
Q ss_pred cchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCC
Q psy14906 335 IASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSK 414 (583)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (583)
.+...
T Consensus 245 ---------------------------------------------------------------------------~~~~~ 249 (425)
T 1r5m_A 245 ---------------------------------------------------------------------------GHHGP 249 (425)
T ss_dssp ---------------------------------------------------------------------------CCSSC
T ss_pred ---------------------------------------------------------------------------cCCCc
Confidence 11257
Q ss_pred ceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCC
Q psy14906 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP 494 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 494 (583)
+.+++|+|+++++++++.||.|++||+.+++....+ ..|...|.+++|+|++ ++++++.|+.|++||+.+. +
T Consensus 250 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-----~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~--~ 321 (425)
T 1r5m_A 250 ISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCF-----YGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQN--T 321 (425)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEE-----CCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTT--E
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEe-----cCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCC--c
Confidence 899999999999999999999999999999888888 6899999999999999 9999999999999999987 7
Q ss_pred ceEEeec-cCCeeeEEeccCCcEEEEEeCCceEEEEEccccc--------------------eEEeeccccc--ceeeEE
Q psy14906 495 PLRSIKL-DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT--------------------IIRKLSGHMG--QLTDAD 551 (583)
Q Consensus 495 ~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~--------------------~~~~~~~h~~--~v~~l~ 551 (583)
.+..+.. ...+.+++|+|++++|++++.||.|++||+.+++ .+..+.+|.. .|++++
T Consensus 322 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 401 (425)
T 1r5m_A 322 LLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLS 401 (425)
T ss_dssp EEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEE
T ss_pred EeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEE
Confidence 7776664 5689999999999999999999999999999988 8899999976 999999
Q ss_pred ecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 552 FSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 552 ~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
|+|++++|++++.||.|++|+++
T Consensus 402 ~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 402 WNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ECTTSSEEEEEESSSCCEEEECC
T ss_pred ccCCCceEEEEecCceEEEEeec
Confidence 99999999999999999999986
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-46 Score=350.95 Aligned_cols=283 Identities=19% Similarity=0.281 Sum_probs=249.9
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC--
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR-- 237 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-- 237 (583)
+|...|.+++|+|++++|++|+.||+|++||..+++....+..|...|.+++|+|++. ++++++.|+.+++|++...
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~-~lasg~~d~~i~v~~~~~~~~ 140 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGC-AIACGGLDNKCSVYPLTFDKN 140 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSS-EEEEESTTSEEEEEECCCCTT
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCC-EEEEeeCCCCEEEEEEecccc
Confidence 9999999999999999999999999999999999999999999999999999999999 9999999999999998643
Q ss_pred ----eehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeC-CCCEEEE
Q psy14906 238 ----QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGN-SSDNILS 312 (583)
Q Consensus 238 ----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~ 312 (583)
.....+ .+|...|.+++|+|++..|++++.|++|++||++ .++.+..+.+|...|.++.++|. ++.+|++
T Consensus 141 ~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~----~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~s 215 (354)
T 2pbi_B 141 ENMAAKKKSV-AMHTNYLSACSFTNSDMQILTASGDGTCALWDVE----SGQLLQSFHGHGADVLCLDLAPSETGNTFVS 215 (354)
T ss_dssp CCSGGGCEEE-EECSSCEEEEEECSSSSEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEECCCSSCCEEEE
T ss_pred ccccccceee-eccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCC----CCeEEEEEcCCCCCeEEEEEEeCCCCCEEEE
Confidence 223334 5799999999999999999999999999999775 56778888999999999999863 4578888
Q ss_pred eeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeec
Q psy14906 313 AAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSF 392 (583)
Q Consensus 313 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 392 (583)
++.||.|++||++++++
T Consensus 216 gs~Dg~v~~wd~~~~~~--------------------------------------------------------------- 232 (354)
T 2pbi_B 216 GGCDKKAMVWDMRSGQC--------------------------------------------------------------- 232 (354)
T ss_dssp EETTSCEEEEETTTCCE---------------------------------------------------------------
T ss_pred EeCCCeEEEEECCCCcE---------------------------------------------------------------
Confidence 88888888888765432
Q ss_pred CcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc
Q psy14906 393 YKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472 (583)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 472 (583)
...+ .+|...|++++|+|+++
T Consensus 233 ------------------------------------------------------~~~~-----~~h~~~v~~v~~~p~~~ 253 (354)
T 2pbi_B 233 ------------------------------------------------------VQAF-----ETHESDVNSVRYYPSGD 253 (354)
T ss_dssp ------------------------------------------------------EEEE-----CCCSSCEEEEEECTTSS
T ss_pred ------------------------------------------------------EEEe-----cCCCCCeEEEEEeCCCC
Confidence 1222 57888999999999999
Q ss_pred EEEEeecCCcEEEEEccCCCCCceEEeecc---CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceee
Q psy14906 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLD---NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTD 549 (583)
Q Consensus 473 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~ 549 (583)
+|++++.|++|++||+... +.+..+... ..+.+++|+|+|++|++|+.|+.|++||+.+++.+..+.+|...|++
T Consensus 254 ~l~s~s~D~~v~lwd~~~~--~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~ 331 (354)
T 2pbi_B 254 AFASGSDDATCRLYDLRAD--REVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVST 331 (354)
T ss_dssp EEEEEETTSCEEEEETTTT--EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEE
T ss_pred EEEEEeCCCeEEEEECCCC--cEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEE
Confidence 9999999999999999876 555555433 36889999999999999999999999999999999999999999999
Q ss_pred EEecCCCcEEEEEeCCCeEEEEe
Q psy14906 550 ADFSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 550 l~~s~d~~~l~s~~~d~~i~vw~ 572 (583)
++|+||+++|++++.|++|++|+
T Consensus 332 l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 332 LRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEECTTSSCEEEEETTSEEEEEC
T ss_pred EEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999996
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-46 Score=342.46 Aligned_cols=288 Identities=19% Similarity=0.249 Sum_probs=253.5
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
+|...|.+++|+|++++|++++.||.|++||+.+++.+..+..|..+|.+++|+|+++ +|++|+.|+.|++||+.+++.
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s~d~~i~vwd~~~~~~ 89 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKN-WIIVGSDDFRIRVFNYNTGEK 89 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGT-EEEEEETTSEEEEEETTTCCE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCC-EEEEECCCCEEEEEECCCCcE
Confidence 8999999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
+..+ .+|...|.+++|+|++++|++++.|++|++||+.. .......+.+|...|.+++|+|.++..|++++.|++|
T Consensus 90 ~~~~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~---~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v 165 (304)
T 2ynn_A 90 VVDF-EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN---NWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (304)
T ss_dssp EEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGG---TTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred EEEE-eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCC---CcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 9888 79999999999999999999999999999998763 2355677889999999999998678899999999999
Q ss_pred EEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 320 RIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 320 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
++||+.+......+
T Consensus 166 ~iwd~~~~~~~~~~------------------------------------------------------------------ 179 (304)
T 2ynn_A 166 KVWSLGQSTPNFTL------------------------------------------------------------------ 179 (304)
T ss_dssp EEEETTCSSCSEEE------------------------------------------------------------------
T ss_pred EEEECCCCCcccee------------------------------------------------------------------
Confidence 99998653211100
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC--CCcEEEEe
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN--LNQIVISG 477 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~ 477 (583)
. ..|...+..+.|+| ++++|+++
T Consensus 180 --------------------------------------------------~-----~~~~~~v~~~~~~~~~~~~~l~s~ 204 (304)
T 2ynn_A 180 --------------------------------------------------T-----TGQERGVNYVDYYPLPDKPYMITA 204 (304)
T ss_dssp --------------------------------------------------E-----CCCTTCEEEEEECCSTTCCEEEEE
T ss_pred --------------------------------------------------c-----cCCcCcEEEEEEEEcCCCCEEEEE
Confidence 0 24556678888876 67899999
Q ss_pred ecCCcEEEEEccCCCCCceEEeec-cCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCC
Q psy14906 478 GNDQTVKVWHFKQTGKPPLRSIKL-DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDS 556 (583)
Q Consensus 478 ~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~ 556 (583)
+.|++|++||+.++ +++..+.. ...|.+++|+|++++|++|+.||.|++||+.+++++..+..|...+.+++|+|++
T Consensus 205 s~D~~i~iWd~~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (304)
T 2ynn_A 205 SDDLTIKIWDYQTK--SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTG 282 (304)
T ss_dssp ETTSEEEEEETTTT--EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTC
T ss_pred cCCCeEEEEeCCCC--ccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCC
Confidence 99999999999988 77777764 4789999999999999999999999999999999999999999999999999987
Q ss_pred c--EEEEEeCCCeEEEEeCCCc
Q psy14906 557 R--WLITASMDCTIRVWDIPSS 576 (583)
Q Consensus 557 ~--~l~s~~~d~~i~vw~~~~~ 576 (583)
. ++++++.|| +.+|++.+.
T Consensus 283 ~~~~~asg~~~g-~~~~~~~~~ 303 (304)
T 2ynn_A 283 RKNYIASGFDNG-FTVLSLGND 303 (304)
T ss_dssp GGGCEEEEETTE-EEEEECC--
T ss_pred CceEEEEecCCc-eEEEEeccC
Confidence 5 577776555 788888653
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-46 Score=345.23 Aligned_cols=285 Identities=18% Similarity=0.307 Sum_probs=246.8
Q ss_pred cCCcceEEEeeCCCC-CEEEEEecCCeEEEEEccC-----CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEe
Q psy14906 160 RWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILT-----DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWN 233 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~-~~l~~~~~d~~i~iw~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd 233 (583)
+|.+.|.+++|+|++ ++|++|+.|++|++|++.. +.++..+.+|...|.+++|+|+++ +|++++.|++|++||
T Consensus 15 gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~-~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGA-YALSASWDKTLRLWD 93 (319)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEE
T ss_pred cccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCC-EEEEEeCCCEEEEEE
Confidence 999999999999965 8999999999999999864 345678899999999999999999 999999999999999
Q ss_pred CCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeC-----CCC
Q psy14906 234 LEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGN-----SSD 308 (583)
Q Consensus 234 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~ 308 (583)
+.+++.+..+ .+|...|.+++|+|++.+|++++.|+.|++|+++ ...+..+.+|...|.++.+.|. ++.
T Consensus 94 ~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 167 (319)
T 3frx_A 94 VATGETYQRF-VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-----GQCLATLLGHNDWVSQVRVVPNEKADDDSV 167 (319)
T ss_dssp TTTTEEEEEE-ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-----SCEEEEECCCSSCEEEEEECCC------CC
T ss_pred CCCCCeeEEE-ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-----CCeEEEEeccCCcEEEEEEccCCCCCCCcc
Confidence 9999999888 7999999999999999999999999999999763 4677788899999999999873 123
Q ss_pred EEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEE
Q psy14906 309 NILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVS 388 (583)
Q Consensus 309 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 388 (583)
.+++++.|+.|++||+
T Consensus 168 ~l~s~~~d~~i~~wd~---------------------------------------------------------------- 183 (319)
T 3frx_A 168 TIISAGNDKMVKAWNL---------------------------------------------------------------- 183 (319)
T ss_dssp EEEEEETTSCEEEEET----------------------------------------------------------------
T ss_pred EEEEEeCCCEEEEEEC----------------------------------------------------------------
Confidence 4555555555555554
Q ss_pred EeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEe
Q psy14906 389 LWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSD 468 (583)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s 468 (583)
.+++....+ .+|...|.+++|+
T Consensus 184 -----------------------------------------------------~~~~~~~~~-----~~h~~~v~~~~~s 205 (319)
T 3frx_A 184 -----------------------------------------------------NQFQIEADF-----IGHNSNINTLTAS 205 (319)
T ss_dssp -----------------------------------------------------TTTEEEEEE-----CCCCSCEEEEEEC
T ss_pred -----------------------------------------------------Ccchhheee-----cCCCCcEEEEEEc
Confidence 444433444 6899999999999
Q ss_pred CCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeec-------
Q psy14906 469 NLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLS------- 541 (583)
Q Consensus 469 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~------- 541 (583)
|++++|++++.||.|++||+.+. +++..+..+..+.+++|+|++.+|++++.+ .+++|+++.+..+..+.
T Consensus 206 p~g~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~ 282 (319)
T 3frx_A 206 PDGTLIASAGKDGEIMLWNLAAK--KAMYTLSAQDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYS 282 (319)
T ss_dssp TTSSEEEEEETTCEEEEEETTTT--EEEEEEECCSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCC
T ss_pred CCCCEEEEEeCCCeEEEEECCCC--cEEEEecCCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccc
Confidence 99999999999999999999988 888888888999999999999999998866 59999999887766554
Q ss_pred -ccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCc
Q psy14906 542 -GHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576 (583)
Q Consensus 542 -~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~ 576 (583)
.|...+.+++|+|||++|++++.|+.|++||+.++
T Consensus 283 ~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 283 KAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp GGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred cCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 34567999999999999999999999999999875
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-46 Score=352.22 Aligned_cols=316 Identities=15% Similarity=0.160 Sum_probs=240.1
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec------CCeEEEEEc
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS------NKKIILHNI 191 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------d~~i~iw~~ 191 (583)
.+++.++.+ +.+.....|++..... . .|...|.+++|+|||++||+|+. |+.|++|+.
T Consensus 14 g~~~~~~~~-~g~~~~~~w~~p~~~p----~-----------~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~ 77 (357)
T 4g56_B 14 GTENLYFQS-NGSSKGSAWGRPVTAP----A-----------CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKD 77 (357)
T ss_dssp ------------------------------------------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESS
T ss_pred CccceEEec-CCCccccccCCCCCCc----c-----------cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEEC
Confidence 444445444 4467788998764321 2 78999999999999999999997 678999998
Q ss_pred cCCce----eEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhh---hhccccceEEEEEecCCCEEE
Q psy14906 192 LTDES----LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI---KKAHRKVVTGAHFLYNEPLLV 264 (583)
Q Consensus 192 ~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~ 264 (583)
.++.. .....+|...|.+++|+|++. +++++.||+|++||+.+++..... ..+|...|.+++|+|++++|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~--~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~ 155 (357)
T 4g56_B 78 PEGAPNESLCTAGVQTEAGVTDVAWVSEKG--ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAV 155 (357)
T ss_dssp CC---CGGGCSEEEECSSCEEEEEEETTTE--EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEE
T ss_pred CCCCcceeEecccCCCCCCEEEEEEcCCCC--EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEE
Confidence 77653 334457778999999999986 667788999999999987654332 147899999999999999999
Q ss_pred EEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhh
Q psy14906 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLK 344 (583)
Q Consensus 265 s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 344 (583)
+++.|+.|++||+. .++.+..+.+|...|.+++|+|....++++++.||+|++||+++++....+..
T Consensus 156 sgs~dg~v~iwd~~----~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~--------- 222 (357)
T 4g56_B 156 SGGKDFSVKVWDLS----QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF--------- 222 (357)
T ss_dssp EEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC---------
T ss_pred EEeCCCeEEEEECC----CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee---------
Confidence 99999999999765 56888899999999999999985456899999999999999988765433210
Q ss_pred hhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC-
Q psy14906 345 RKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC- 423 (583)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~- 423 (583)
..+...+.+++|+|+
T Consensus 223 ----------------------------------------------------------------~~~~~~v~~v~~sp~~ 238 (357)
T 4g56_B 223 ----------------------------------------------------------------CASDTIPTSVTWHPEK 238 (357)
T ss_dssp ----------------------------------------------------------------TTCCSCEEEEEECTTS
T ss_pred ----------------------------------------------------------------ccccccccchhhhhcc
Confidence 011256889999997
Q ss_pred CcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC-cEEEEeecCCcEEEEEccCCCCCceEEeecc
Q psy14906 424 GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN-QIVISGGNDQTVKVWHFKQTGKPPLRSIKLD 502 (583)
Q Consensus 424 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 502 (583)
+.++++|+.|+.|++||+.+++....+ .+|...|++++|+|++ ++|++++.|++|+|||++++ +++..+.|.
T Consensus 239 ~~~la~g~~d~~i~~wd~~~~~~~~~~-----~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~--~~~~~~~H~ 311 (357)
T 4g56_B 239 DDTFACGDETGNVSLVNIKNPDSAQTS-----AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS--EVFRDLSHR 311 (357)
T ss_dssp TTEEEEEESSSCEEEEESSCGGGCEEE-----CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC--EEEEECCCS
T ss_pred cceEEEeecccceeEEECCCCcEeEEE-----eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC--cEeEECCCC
Confidence 468899999999999999999998888 7899999999999987 58999999999999999988 888888888
Q ss_pred CCeeeEEecc-CCcEEEEEeCCceEEEEEccccc
Q psy14906 503 NGISFFRTHQ-ESSMLAVCLDDFTVNIIDIDTCT 535 (583)
Q Consensus 503 ~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~ 535 (583)
..|++++|+| ++++|++++.||+|++|++.+..
T Consensus 312 ~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 312 DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 9999999998 79999999999999999997543
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=346.57 Aligned_cols=290 Identities=19% Similarity=0.270 Sum_probs=259.0
Q ss_pred eeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEE
Q psy14906 102 DIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV 179 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 179 (583)
+....+.+|...|+++ +|++++|++++.||+|++||..+++....+. .|...|.+++|+|++.+|++
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~-----------~~~~~v~~~~~sp~g~~las 123 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVT-----------MPCTWVMACAYAPSGCAIAC 123 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-----------CSSSCCCEEEECTTSSEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEe-----------cCCCCEEEEEECCCCCEEEE
Confidence 4567899999999998 9999999999999999999999999888887 78889999999999999999
Q ss_pred EecCCeEEEEEccCC------ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEE
Q psy14906 180 GLSNKKIILHNILTD------ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTG 253 (583)
Q Consensus 180 ~~~d~~i~iw~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~ 253 (583)
|+.|+.+++|++... .....+..|...|.+++|+|++. .|++++.|++|++||+++++++..+ .+|...|.+
T Consensus 124 g~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~~~~~~~~-~~h~~~v~~ 201 (354)
T 2pbi_B 124 GGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDM-QILTASGDGTCALWDVESGQLLQSF-HGHGADVLC 201 (354)
T ss_dssp ESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEE
T ss_pred eeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEeCCCCeEEEEE-cCCCCCeEE
Confidence 999999999998643 34567788999999999999998 8999999999999999999999988 799999999
Q ss_pred EEEec--CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccce
Q psy14906 254 AHFLY--NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNK 331 (583)
Q Consensus 254 ~~~~~--~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 331 (583)
++|+| ++++|++++.|+.|++||+. .++.+..+.+|...|.+++|+| ++.+|++++.|++|++||++.+....
T Consensus 202 ~~~~~~~~g~~l~sgs~Dg~v~~wd~~----~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~~~ 276 (354)
T 2pbi_B 202 LDLAPSETGNTFVSGGCDKKAMVWDMR----SGQCVQAFETHESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADREVA 276 (354)
T ss_dssp EEECCCSSCCEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEeCCCCCEEEEEeCCCeEEEEECC----CCcEEEEecCCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 99987 57899999999999999775 4567888999999999999998 79999999999999999998754332
Q ss_pred eeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccC
Q psy14906 332 NLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAK 411 (583)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 411 (583)
.+... ..
T Consensus 277 ~~~~~-------------------------------------------------------------------------~~ 283 (354)
T 2pbi_B 277 IYSKE-------------------------------------------------------------------------SI 283 (354)
T ss_dssp EECCT-------------------------------------------------------------------------TC
T ss_pred EEcCC-------------------------------------------------------------------------Cc
Confidence 21100 00
Q ss_pred CCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE
Q psy14906 412 QSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487 (583)
Q Consensus 412 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 487 (583)
...+.+++|+|+++++++|+.|+.|++||+.+++.+..+ .+|...|++++|+|++++|++++.|++|++|+
T Consensus 284 ~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l-----~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 284 IFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL-----FGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE-----CCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEE-----ECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 135789999999999999999999999999999988887 79999999999999999999999999999996
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-45 Score=346.18 Aligned_cols=307 Identities=14% Similarity=0.201 Sum_probs=248.5
Q ss_pred ceeEEEeccCC-CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeeh--hhhhhccccceEEEEEecCCCEEEEEeCCCe
Q psy14906 195 ESLMEFIQTWG-PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE--NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271 (583)
Q Consensus 195 ~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 271 (583)
+.+.++.+|.. .|.+++|+|+++ +|++|+.|++|++||+.+++.. ..+..+|...|.+++|+|++++|++++.|+.
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~-~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGT-LLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSS-CEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEeeeecCCCCCcEEEEEECCCCC-EEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 56677888877 899999999999 8999999999999999887543 2232689999999999999999999999999
Q ss_pred EEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhc
Q psy14906 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEK 351 (583)
Q Consensus 272 i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (583)
+++|+++. .....+..+.+|...|.+++|+| ++++|++++.|++|++||+.++.....+
T Consensus 85 v~iw~~~~--~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~------------------ 143 (345)
T 3fm0_A 85 TCIWKKNQ--DDFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECV------------------ 143 (345)
T ss_dssp EEEEEECC--C-EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEE------------------
T ss_pred EEEEEccC--CCeEEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEE------------------
Confidence 99997653 24467788999999999999998 8999999999999999998765321110
Q ss_pred cccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe
Q psy14906 352 MNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY 431 (583)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 431 (583)
.....|...+.+++|+|++++|++++
T Consensus 144 ------------------------------------------------------~~~~~h~~~v~~~~~~p~~~~l~s~s 169 (345)
T 3fm0_A 144 ------------------------------------------------------SVLNSHTQDVKHVVWHPSQELLASAS 169 (345)
T ss_dssp ------------------------------------------------------EEECCCCSCEEEEEECSSSSCEEEEE
T ss_pred ------------------------------------------------------EEecCcCCCeEEEEECCCCCEEEEEe
Confidence 00112236799999999999999999
Q ss_pred cCceEEEEEcccCcc--ccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCC-------------ce
Q psy14906 432 SSGHVDRFNIQSGAH--RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP-------------PL 496 (583)
Q Consensus 432 ~dg~i~i~d~~~~~~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~-------------~~ 496 (583)
.|+.|++||..++.. ...+ .+|...|++++|+|++++|++++.|++|++|+....... ++
T Consensus 170 ~d~~i~~w~~~~~~~~~~~~~-----~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T 3fm0_A 170 YDDTVKLYREEEDDWVCCATL-----EGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI 244 (345)
T ss_dssp TTSCEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEE
T ss_pred CCCcEEEEEecCCCEEEEEEe-----cCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcccee
Confidence 999999999987753 3455 789999999999999999999999999999997543111 11
Q ss_pred EEee--ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccc---------eEEeecccccceeeEEecCCC-cEEEEEeC
Q psy14906 497 RSIK--LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT---------IIRKLSGHMGQLTDADFSPDS-RWLITASM 564 (583)
Q Consensus 497 ~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~h~~~v~~l~~s~d~-~~l~s~~~ 564 (583)
..+. +...|.+++|+|++..|++++.|+.|++|+...+. ......+|...|++++|+|++ .+||+++.
T Consensus 245 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~ 324 (345)
T 3fm0_A 245 CTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSD 324 (345)
T ss_dssp EEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEET
T ss_pred EEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCC
Confidence 1222 45689999999999999999999999999987542 122346899999999999998 59999999
Q ss_pred CCeEEEEeCCCccccccc
Q psy14906 565 DCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 565 d~~i~vw~~~~~~~~~~~ 582 (583)
||+|++|++.+++.+..+
T Consensus 325 Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 325 DGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp TSCEEEEEECC-------
T ss_pred CCcEEEEEecCCCCcccc
Confidence 999999999998876543
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=352.55 Aligned_cols=315 Identities=17% Similarity=0.272 Sum_probs=265.7
Q ss_pred eEEEEec-cceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEe
Q psy14906 93 IIYAWRR-GIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLE 169 (583)
Q Consensus 93 ~i~vw~~-~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 169 (583)
.+..|+. +....++|.+|.+.|+++ +|++++|++|+.||+|++||+.+++....+. .|...|.+++
T Consensus 47 ~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~-----------~h~~~v~~~~ 115 (380)
T 3iz6_a 47 TAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIK-----------LHCPWVMECA 115 (380)
T ss_dssp GCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE-----------CCCTTCCCCE
T ss_pred cccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEe-----------cCCCCEEEEE
Confidence 3445554 446678899999999997 9999999999999999999999999999988 8999999999
Q ss_pred eCCCCCEEEEEecCCeEEEEEccCCc-------eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhh
Q psy14906 170 PSPVVDIIGVGLSNKKIILHNILTDE-------SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242 (583)
Q Consensus 170 ~s~~~~~l~~~~~d~~i~iw~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 242 (583)
|+|++++|++|+.|+.+++||+.+.. ....+.+|.+.|.++.|.|++...|++|+.|++|++||+.+++.+..
T Consensus 116 ~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~ 195 (380)
T 3iz6_a 116 FAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISI 195 (380)
T ss_dssp ECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEE
T ss_pred ECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEE
Confidence 99999999999999999999987532 34567799999999999998665799999999999999999887654
Q ss_pred h----hhccccceEEEEEec-CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC
Q psy14906 243 I----KKAHRKVVTGAHFLY-NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS 317 (583)
Q Consensus 243 ~----~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 317 (583)
+ ..+|...|.+++|++ ++++|++|+.|+.|++||+.. ....+..+.+|...|.+++|+| ++++|++++.||
T Consensus 196 ~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~---~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~ 271 (380)
T 3iz6_a 196 FGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRI---TSRAVRTYHGHEGDINSVKFFP-DGQRFGTGSDDG 271 (380)
T ss_dssp ECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTT---TCCCCEEECCCSSCCCEEEECT-TSSEEEEECSSS
T ss_pred eecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCC---CCcceEEECCcCCCeEEEEEec-CCCeEEEEcCCC
Confidence 3 257899999999987 889999999999999997753 2456778899999999999998 899999999999
Q ss_pred cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccc
Q psy14906 318 TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKM 397 (583)
Q Consensus 318 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 397 (583)
+|++||++++.....+.... .
T Consensus 272 ~i~lwd~~~~~~~~~~~~~~---------------------------------------------------------~-- 292 (380)
T 3iz6_a 272 TCRLFDMRTGHQLQVYNREP---------------------------------------------------------D-- 292 (380)
T ss_dssp CEEEEETTTTEEEEEECCCC---------------------------------------------------------S--
T ss_pred eEEEEECCCCcEEEEecccc---------------------------------------------------------c--
Confidence 99999999876554331110 0
Q ss_pred cceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEe
Q psy14906 398 DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISG 477 (583)
Q Consensus 398 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 477 (583)
....+...+++++|+|+|+++++|+.||.|++||+.+++....+... ..+|.+.|++++|+|++++|++|
T Consensus 293 ---------~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-~~~h~~~v~~l~~s~dg~~l~sg 362 (380)
T 3iz6_a 293 ---------RNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTL-QNSHEGRISCLGLSSDGSALCTG 362 (380)
T ss_dssp ---------SSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCS-CSSCCCCCCEEEECSSSSEEEEE
T ss_pred ---------ccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecc-cCCCCCceEEEEECCCCCEEEEe
Confidence 00001135889999999999999999999999999988876655221 14799999999999999999999
Q ss_pred ecCCcEEEEEccCC
Q psy14906 478 GNDQTVKVWHFKQT 491 (583)
Q Consensus 478 ~~dg~i~iwd~~~~ 491 (583)
+.|++|++|++...
T Consensus 363 s~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 363 SWDKNLKIWAFSGH 376 (380)
T ss_dssp CTTSCEEEEECCSS
T ss_pred eCCCCEEEEecCCC
Confidence 99999999999865
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=334.18 Aligned_cols=292 Identities=17% Similarity=0.285 Sum_probs=253.8
Q ss_pred eeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEE
Q psy14906 102 DIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV 179 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 179 (583)
+..++|.+|.+.|.++ +|++++|++++.||+|++||+.+++.+..+. .|..+|.+++|+|++++|++
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~s 72 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ-----------VTETPVRAGKFIARKNWIIV 72 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE-----------CCSSCEEEEEEEGGGTEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee-----------ccCCcEEEEEEeCCCCEEEE
Confidence 4567899999999997 9999999999999999999999999999887 88999999999999999999
Q ss_pred EecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC-eehhhhhhccccceEEEEEec
Q psy14906 180 GLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR-QVENQIKKAHRKVVTGAHFLY 258 (583)
Q Consensus 180 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~ 258 (583)
|+.|++|++||+.+++.+..+.+|...|.+++|+|+++ +|++|+.|++|++||++++ .+...+ .+|...|.+++|+|
T Consensus 73 ~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~-~~h~~~v~~v~~~p 150 (304)
T 2ynn_A 73 GSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTF-EGHEHFVMCVAFNP 150 (304)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEEEEEE-CCCCSCEEEEEECT
T ss_pred ECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcchhhhh-cccCCcEEEEEECC
Confidence 99999999999999999999999999999999999999 8999999999999999877 444555 78999999999999
Q ss_pred -CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEee-CCCCEEEEeeCCCcEEEEEccccccceeeccc
Q psy14906 259 -NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG-NSSDNILSAAGDSTLRIFNTKSETSNKNLGIA 336 (583)
Q Consensus 259 -~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 336 (583)
++.+|++++.|+.|++||+... ........+|...+..+.|+| .++.+|++++.|++|++||++++++...+.
T Consensus 151 ~~~~~l~sgs~D~~v~iwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~-- 225 (304)
T 2ynn_A 151 KDPSTFASGCLDRTVKVWSLGQS---TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE-- 225 (304)
T ss_dssp TCTTEEEEEETTSEEEEEETTCS---SCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE--
T ss_pred CCCCEEEEEeCCCeEEEEECCCC---CccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC--
Confidence 6789999999999999977532 222333456678899999986 357799999999999999998876544331
Q ss_pred hhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCce
Q psy14906 337 SANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT 416 (583)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 416 (583)
.|...+.
T Consensus 226 -------------------------------------------------------------------------~h~~~v~ 232 (304)
T 2ynn_A 226 -------------------------------------------------------------------------GHMSNVS 232 (304)
T ss_dssp -------------------------------------------------------------------------CCSSCEE
T ss_pred -------------------------------------------------------------------------CCCCCEE
Confidence 1226789
Q ss_pred EEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc--EEEEeecCCcEEEEEccC
Q psy14906 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ--IVISGGNDQTVKVWHFKQ 490 (583)
Q Consensus 417 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~--~l~s~~~dg~i~iwd~~~ 490 (583)
+++|+|++++|++|+.||.|++||+.+++....+ ..|...+.+++|+|++. ++++++.| .+.+|++..
T Consensus 233 ~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~asg~~~-g~~~~~~~~ 302 (304)
T 2ynn_A 233 FAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL-----NVGLERSWCIATHPTGRKNYIASGFDN-GFTVLSLGN 302 (304)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE-----CCSSSSEEEEEECTTCGGGCEEEEETT-EEEEEECC-
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCceeeec-----cCCCccEEEEEECCCCCceEEEEecCC-ceEEEEecc
Confidence 9999999999999999999999999999999888 78899999999999875 57777655 477887764
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=344.24 Aligned_cols=290 Identities=16% Similarity=0.130 Sum_probs=238.5
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccC-----------CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCc
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILT-----------DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGH 228 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 228 (583)
.+...|.+++|+|||++|++++ |+++++||... .........+...|.+++|+|++ .|++|+.||+
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~--~l~~~s~dg~ 104 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER--GILVASDSGA 104 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT--EEEEEETTSE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC--eEEEEECCCE
Confidence 5678899999999999999887 66778876321 01112223445789999999986 5889999999
Q ss_pred EEEEeCCCCeehhhh---hhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeC
Q psy14906 229 LTVWNLEDRQVENQI---KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGN 305 (583)
Q Consensus 229 i~vwd~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 305 (583)
|++||+++++.+... ..+|.+.|++++|+|++++|++++.|++|++||+. .++.+..+.+|...|.+++|+|.
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~----~~~~~~~~~~h~~~V~~~~~~~~ 180 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA----QQVVLSSYRAHAAQVTCVAASPH 180 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECSS
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC----CCcEEEEEcCcCCceEEEEecCC
Confidence 999999988765433 14799999999999999999999999999999775 57888999999999999999985
Q ss_pred CCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCc
Q psy14906 306 SSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKN 385 (583)
Q Consensus 306 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (583)
+..+|++++.|++|++||+++++....+...
T Consensus 181 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~------------------------------------------------- 211 (344)
T 4gqb_B 181 KDSVFLSCSEDNRILLWDTRCPKPASQIGCS------------------------------------------------- 211 (344)
T ss_dssp CTTEEEEEETTSCEEEEETTSSSCEEECC---------------------------------------------------
T ss_pred CCCceeeeccccccccccccccceeeeeecc-------------------------------------------------
Confidence 5568899999999999999987765443110
Q ss_pred eEEEeecCcccccceeeecccccccCCCCceEEEEccC-CcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeE
Q psy14906 386 KVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC-GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRG 464 (583)
Q Consensus 386 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~ 464 (583)
.+...+.+++|+|+ ++++++|+.||.|++||+++++.+..+ .+|...|++
T Consensus 212 ------------------------~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~-----~~h~~~v~~ 262 (344)
T 4gqb_B 212 ------------------------APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSS-----AVHSQCVTG 262 (344)
T ss_dssp --------------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEE-----ECCSSCEEE
T ss_pred ------------------------eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEE-----cCCCCCEEE
Confidence 01145789999995 578899999999999999999999888 799999999
Q ss_pred EEEeCCC-cEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCc-EEEEEeCCceEEEEEccccce
Q psy14906 465 VVSDNLN-QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS-MLAVCLDDFTVNIIDIDTCTI 536 (583)
Q Consensus 465 ~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~ 536 (583)
++|+|++ ++|++++.|++|+|||+.++ ++.....|.+.|.+++|+|+++ +|++++.|++|++|++.+...
T Consensus 263 v~fsp~g~~~lasgs~D~~i~vwd~~~~--~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 263 LVFSPHSVPFLASLSEDCSLAVLDSSLS--ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTCC--EEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred EEEccCCCeEEEEEeCCCeEEEEECCCC--cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 9999998 58999999999999999987 7776667778999999999987 577899999999999987543
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-45 Score=344.23 Aligned_cols=320 Identities=15% Similarity=0.173 Sum_probs=237.3
Q ss_pred EeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcC------CCcEEEEeCCCCeehh
Q psy14906 168 LEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSN------TGHLTVWNLEDRQVEN 241 (583)
Q Consensus 168 ~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~ 241 (583)
+.+.+++.++. +..+.....|++.... ...|...|++++|+|||+ +|++++. |+.+++|+..++....
T Consensus 11 ~d~g~~~~~~~-~~g~~~~~~w~~p~~~----p~~H~~~V~~v~fSpDG~-~las~s~d~~~~wd~~v~~~~~~~~~~~~ 84 (357)
T 4g56_B 11 VDLGTENLYFQ-SNGSSKGSAWGRPVTA----PACMEVQIGAVRYRRDGA-LLLAASSLSSRTWGGSIWVFKDPEGAPNE 84 (357)
T ss_dssp ----------------------------------CCCSEEEEEEECSSSC-EEEEEECSSSSSCCEEEEEESSCC---CG
T ss_pred CCCCccceEEe-cCCCccccccCCCCCC----cccccCCEEEEEECCCCC-EEEEEcCCCCccccCeEEEEECCCCCcce
Confidence 44445554444 4445677889876433 347889999999999999 8999987 7789999998876544
Q ss_pred hhh---hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCc
Q psy14906 242 QIK---KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDST 318 (583)
Q Consensus 242 ~~~---~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 318 (583)
.+. .+|...|.+++|+|++. +++++.||+|++||+..............+|...|.+++|+| ++++|++++.|+.
T Consensus 85 ~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~ 162 (357)
T 4g56_B 85 SLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFS 162 (357)
T ss_dssp GGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSC
T ss_pred eEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCe
Confidence 431 46888999999999986 556778999999977643322223345568999999999998 8999999999999
Q ss_pred EEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccc
Q psy14906 319 LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMD 398 (583)
Q Consensus 319 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 398 (583)
|++||+.+++....+.
T Consensus 163 v~iwd~~~~~~~~~~~---------------------------------------------------------------- 178 (357)
T 4g56_B 163 VKVWDLSQKAVLKSYN---------------------------------------------------------------- 178 (357)
T ss_dssp EEEEETTTTEEEEEEC----------------------------------------------------------------
T ss_pred EEEEECCCCcEEEEEc----------------------------------------------------------------
Confidence 9999998876544331
Q ss_pred ceeeecccccccCCCCceEEEEccCCc-EEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC-cEEEE
Q psy14906 399 DMFLVPERCKQAKQSKPTCVYITHCGN-FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN-QIVIS 476 (583)
Q Consensus 399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s 476 (583)
.|...+.+++|+|++. ++++++.||.|++||+++++....+.. ..|...+.+++|+|++ .+|++
T Consensus 179 -----------~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~---~~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 179 -----------AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF---CASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp -----------CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC---TTCCSCEEEEEECTTSTTEEEE
T ss_pred -----------CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee---ccccccccchhhhhcccceEEE
Confidence 1226799999999875 788999999999999999887766532 4678889999999974 68899
Q ss_pred eecCCcEEEEEccCCCCCceEEeec-cCCeeeEEeccCC-cEEEEEeCCceEEEEEccccceEEeecccccceeeEEecC
Q psy14906 477 GGNDQTVKVWHFKQTGKPPLRSIKL-DNGISFFRTHQES-SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSP 554 (583)
Q Consensus 477 ~~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~ 554 (583)
++.|+.|++||+.++ +++..+.. ...|++++|+|++ ++||+|+.|++|+|||+++++++..+ +|.+.|++++|+|
T Consensus 245 g~~d~~i~~wd~~~~--~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP 321 (357)
T 4g56_B 245 GDETGNVSLVNIKNP--DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSP 321 (357)
T ss_dssp EESSSCEEEEESSCG--GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECS
T ss_pred eecccceeEEECCCC--cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeC
Confidence 999999999999988 77777764 4689999999987 58999999999999999999887665 7999999999998
Q ss_pred -CCcEEEEEeCCCeEEEEeCCCc
Q psy14906 555 -DSRWLITASMDCTIRVWDIPSS 576 (583)
Q Consensus 555 -d~~~l~s~~~d~~i~vw~~~~~ 576 (583)
|+++|+|++.|++|++|++.+.
T Consensus 322 ~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 322 LDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp SSTTEEEEEETTSCEEEEECC--
T ss_pred CCCCEEEEEcCCCeEEEEECCCC
Confidence 8999999999999999999764
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-44 Score=334.89 Aligned_cols=294 Identities=15% Similarity=0.226 Sum_probs=251.5
Q ss_pred eeeeeecccCccEEEE--ccCC-CEEEEEeCCCcEEEEEcCCC-----cEEEEeeccCCceEEecccCCcceEEEeeCCC
Q psy14906 102 DIVGTYKGHTSPVHLI--LPFG-PHLISVDEESNVKVWDIKAE-----ETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV 173 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i--s~~~-~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 173 (583)
.+..+|++|.++|+++ +|++ ++|++++.|++|++|++.+. ..+..+. +|...|.+++|+|+
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~-----------~h~~~v~~~~~s~d 76 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFK-----------GHSHIVQDCTLTAD 76 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEE-----------CCSSCEEEEEECTT
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEe-----------CCcccEEEEEECCC
Confidence 3456789999999997 6755 89999999999999998652 3455565 99999999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEE
Q psy14906 174 VDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTG 253 (583)
Q Consensus 174 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~ 253 (583)
+++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|++. +|++|+.|++|++||++ ++.+..+ .+|...|.+
T Consensus 77 g~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~-~~~~~~~-~~h~~~v~~ 153 (319)
T 3frx_A 77 GAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIK-GQCLATL-LGHNDWVSQ 153 (319)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETT-SCEEEEE-CCCSSCEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECC-CCeEEEE-eccCCcEEE
Confidence 99999999999999999999999999999999999999999998 99999999999999997 4556666 689999999
Q ss_pred EEEecC------CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccc
Q psy14906 254 AHFLYN------EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 254 ~~~~~~------~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
+.|+|. +..|++++.|+.|++||+. ..+....+.+|...|.+++|+| ++++|++++.||.|++||+.++
T Consensus 154 ~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~----~~~~~~~~~~h~~~v~~~~~sp-~g~~l~s~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 154 VRVVPNEKADDDSVTIISAGNDKMVKAWNLN----QFQIEADFIGHNSNINTLTASP-DGTLIASAGKDGEIMLWNLAAK 228 (319)
T ss_dssp EEECCC------CCEEEEEETTSCEEEEETT----TTEEEEEECCCCSCEEEEEECT-TSSEEEEEETTCEEEEEETTTT
T ss_pred EEEccCCCCCCCccEEEEEeCCCEEEEEECC----cchhheeecCCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCC
Confidence 999985 4589999999999999775 4567788899999999999998 8999999999999999999887
Q ss_pred ccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccc
Q psy14906 328 TSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERC 407 (583)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 407 (583)
+....+..
T Consensus 229 ~~~~~~~~------------------------------------------------------------------------ 236 (319)
T 3frx_A 229 KAMYTLSA------------------------------------------------------------------------ 236 (319)
T ss_dssp EEEEEEEC------------------------------------------------------------------------
T ss_pred cEEEEecC------------------------------------------------------------------------
Confidence 65443211
Q ss_pred cccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCC---CCCCcccCeeEEEEeCCCcEEEEeecCCcEE
Q psy14906 408 KQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHD---NQPGHVGGVRGVVSDNLNQIVISGGNDQTVK 484 (583)
Q Consensus 408 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~ 484 (583)
...+.+++|+|++.+++++..++ +++|++..+.....+... ....|...+.+++|+|+|++|++++.||.|+
T Consensus 237 ----~~~v~~~~~sp~~~~la~~~~~~-i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~ 311 (319)
T 3frx_A 237 ----QDEVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIR 311 (319)
T ss_dssp ----CSCEEEEEECSSSSEEEEEETTE-EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ----CCcEEEEEEcCCCCEEEEEcCCC-cEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEE
Confidence 14688999999999999988665 999999877655544211 0134677899999999999999999999999
Q ss_pred EEEccCC
Q psy14906 485 VWHFKQT 491 (583)
Q Consensus 485 iwd~~~~ 491 (583)
+||+.+.
T Consensus 312 vWd~~t~ 318 (319)
T 3frx_A 312 VWQVMTA 318 (319)
T ss_dssp EEEEEEC
T ss_pred EEEEeec
Confidence 9999764
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-44 Score=338.80 Aligned_cols=318 Identities=14% Similarity=0.211 Sum_probs=252.1
Q ss_pred eeeeeecccCc-cEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEE
Q psy14906 102 DIVGTYKGHTS-PVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIG 178 (583)
Q Consensus 102 ~~~~~~~~h~~-~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 178 (583)
.++.++.+|.. .|.++ +|+|++||+++.|++|+|||+.++......... .+|...|.+++|+|++++|+
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~--------~~h~~~v~~~~~sp~g~~l~ 77 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLS--------EGHQRTVRKVAWSPCGNYLA 77 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEEC--------SSCSSCEEEEEECTTSSEEE
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeec--------cccCCcEEEEEECCCCCEEE
Confidence 46778899988 88876 999999999999999999999987654332211 18999999999999999999
Q ss_pred EEecCCeEEEEEccCC--ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe---ehhhhhhccccceEE
Q psy14906 179 VGLSNKKIILHNILTD--ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ---VENQIKKAHRKVVTG 253 (583)
Q Consensus 179 ~~~~d~~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~~v~~ 253 (583)
+|+.|++|++|++.++ +.+..+.+|...|.+++|+|+++ +|++++.|+.|++||+.+++ ++..+ .+|...|.+
T Consensus 78 s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~h~~~v~~ 155 (345)
T 3fm0_A 78 SASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVL-NSHTQDVKH 155 (345)
T ss_dssp EEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEEE-CCCCSCEEE
T ss_pred EEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEEe-cCcCCCeEE
Confidence 9999999999999876 45778899999999999999999 99999999999999998753 34555 689999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceee
Q psy14906 254 AHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 254 ~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 333 (583)
++|+|++++|++++.|+.|++|++... .......+.+|...|.+++|+| ++++|++++.|++|++||.........+
T Consensus 156 ~~~~p~~~~l~s~s~d~~i~~w~~~~~--~~~~~~~~~~h~~~v~~l~~sp-~g~~l~s~s~D~~v~iW~~~~~~~~~~~ 232 (345)
T 3fm0_A 156 VVWHPSQELLASASYDDTVKLYREEED--DWVCCATLEGHESTVWSLAFDP-SGQRLASCSDDRTVRIWRQYLPGNEQGV 232 (345)
T ss_dssp EEECSSSSCEEEEETTSCEEEEEEETT--EEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEEECTTCTTCC
T ss_pred EEECCCCCEEEEEeCCCcEEEEEecCC--CEEEEEEecCCCCceEEEEECC-CCCEEEEEeCCCeEEEeccccCCCCccc
Confidence 999999999999999999999976532 3345678899999999999998 8999999999999999997543221111
Q ss_pred ccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCC
Q psy14906 334 GIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQS 413 (583)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (583)
.. ...+.... ........+..
T Consensus 233 ~~---------------------------------------------~~~~~~~~--------------~~~~~~~~h~~ 253 (345)
T 3fm0_A 233 AC---------------------------------------------SGSDPSWK--------------CICTLSGFHSR 253 (345)
T ss_dssp CC---------------------------------------------C---CEEE--------------EEEEECSSCSS
T ss_pred ee---------------------------------------------eccCCccc--------------eeEEecCCCCC
Confidence 00 00000000 00011112336
Q ss_pred CceEEEEccCCcEEEEEecCceEEEEEcccCccccc----cCCCCCCCcccCeeEEEEeCCC-cEEEEeecCCcEEEEEc
Q psy14906 414 KPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGS----YGHDNQPGHVGGVRGVVSDNLN-QIVISGGNDQTVKVWHF 488 (583)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~----~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~ 488 (583)
.+.+++|+|++..+++++.|+.|++|+...+..... +......+|...|++++|+|++ .+|++++.||+|++|++
T Consensus 254 ~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~ 333 (345)
T 3fm0_A 254 TIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKY 333 (345)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEE
T ss_pred cEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEe
Confidence 799999999999999999999999999876532111 0000115899999999999998 49999999999999999
Q ss_pred cCC
Q psy14906 489 KQT 491 (583)
Q Consensus 489 ~~~ 491 (583)
.+.
T Consensus 334 ~~~ 336 (345)
T 3fm0_A 334 QRP 336 (345)
T ss_dssp CC-
T ss_pred cCC
Confidence 887
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-45 Score=355.01 Aligned_cols=339 Identities=14% Similarity=0.183 Sum_probs=283.4
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc
Q psy14906 116 LILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE 195 (583)
Q Consensus 116 ~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~ 195 (583)
+++|++++|++++.||.|++||+.+++....+. .+ ..+....|+|++++|++|+.||.|++||+.+++
T Consensus 63 ~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 130 (420)
T 3vl1_A 63 TFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLK-----------RA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL 130 (420)
T ss_dssp EEEEEETTEEEEEETTEEEEEECCSEETTTTSC-----------SC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE
T ss_pred eeeecCCeEEEEEcCCcEEEEEecccceeeEEe-----------cC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc
Confidence 459999999999999999999998876544443 33 455566789999999999999999999999999
Q ss_pred eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy14906 196 SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275 (583)
Q Consensus 196 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w 275 (583)
....+.+|...|++++|+|+++ +|++++.|+.|++||+.+++.+..+ .+|...|.+++|+|++++|++++.|+.|++|
T Consensus 131 ~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iw 208 (420)
T 3vl1_A 131 QREIDQAHVSEITKLKFFPSGE-ALISSSQDMQLKIWSVKDGSNPRTL-IGHRATVTDIAIIDRGRNVLSASLDGTIRLW 208 (420)
T ss_dssp EEEETTSSSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCCCEEE-ECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred eeeecccccCccEEEEECCCCC-EEEEEeCCCeEEEEeCCCCcCceEE-cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEe
Confidence 9888889999999999999999 9999999999999999999998888 7999999999999999999999999999999
Q ss_pred EccCCCCCceeeEEecc---CCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcc
Q psy14906 276 IFDKADGNGRLLRIREG---HSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKM 352 (583)
Q Consensus 276 ~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (583)
|+. ..+.+..+.. |...+.++++.|..... +..
T Consensus 209 d~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-----------~~~----------------------------- 244 (420)
T 3vl1_A 209 ECG----TGTTIHTFNRKENPHDGVNSIALFVGTDRQ-----------LHE----------------------------- 244 (420)
T ss_dssp ETT----TTEEEEEECBTTBTTCCEEEEEEEECCCSS-----------CGG-----------------------------
T ss_pred ECC----CCceeEEeecCCCCCCCccEEEEecCCcce-----------eee-----------------------------
Confidence 775 4566666664 56678888887632111 000
Q ss_pred ccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec
Q psy14906 353 NEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS 432 (583)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 432 (583)
.+...+.+++|+|+++++++|+.
T Consensus 245 ---------------------------------------------------------~~~~~v~~~~~s~~~~~l~~~~~ 267 (420)
T 3vl1_A 245 ---------------------------------------------------------ISTSKKNNLEFGTYGKYVIAGHV 267 (420)
T ss_dssp ---------------------------------------------------------GCCCCCCTTCSSCTTEEEEEEET
T ss_pred ---------------------------------------------------------cccCcccceEEcCCCCEEEEEcC
Confidence 00146788899999999999999
Q ss_pred CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc-EEEEeecCCcEEEEEccCCCCCceEEee--ccCCeeeEE
Q psy14906 433 SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ-IVISGGNDQTVKVWHFKQTGKPPLRSIK--LDNGISFFR 509 (583)
Q Consensus 433 dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~~~ 509 (583)
||.|++||+.+++....+. ..|...|.+++|+|+++ +|++++.||.|++||+.+.. .++..+. +...+.++
T Consensus 268 dg~i~i~d~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~-~~~~~~~~~~~~~v~~~- 341 (420)
T 3vl1_A 268 SGVITVHNVFSKEQTIQLP----SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE-CPVGEFLINEGTPINNV- 341 (420)
T ss_dssp TSCEEEEETTTCCEEEEEC----CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-SCSEEEEESTTSCEEEE-
T ss_pred CCeEEEEECCCCceeEEcc----cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc-CchhhhhccCCCCceEE-
Confidence 9999999999988777763 46889999999999998 99999999999999999873 2344444 34567777
Q ss_pred eccCCcEEEEEeCCceEEEEEcccc---------ceEEeecccccceeeEEecCCCc---EEEEEeCCCeEEEEeCCC
Q psy14906 510 THQESSMLAVCLDDFTVNIIDIDTC---------TIIRKLSGHMGQLTDADFSPDSR---WLITASMDCTIRVWDIPS 575 (583)
Q Consensus 510 ~s~~~~~l~~~~~dg~i~i~d~~~~---------~~~~~~~~h~~~v~~l~~s~d~~---~l~s~~~d~~i~vw~~~~ 575 (583)
+.+++++|++++.|+.|++|++... .....+.+|...|.+++|+|+++ .|++++.+|.+.+|++++
T Consensus 342 ~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 342 YFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp EEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred EeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 5568899999999999999998763 22234567889999999999999 777788899999999875
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-44 Score=341.82 Aligned_cols=325 Identities=12% Similarity=0.167 Sum_probs=279.8
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
.+..+|.+++|+|||++++++..++.+..|............+|...|.+++|+|+++ ++++++ ||.|++||+.+++.
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~-dg~i~iw~~~~~~~ 84 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTR-HVYTGG-KGCVKVWDISHPGN 84 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSS-EEEEEC-BSEEEEEETTSTTC
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCc-EEEEcC-CCeEEEEECCCCCc
Confidence 3467899999999999999988888777776655555555558889999999999999 888888 99999999988764
Q ss_pred hhhhhh----ccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC
Q psy14906 240 ENQIKK----AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 240 ~~~~~~----~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 315 (583)
...+.. +|...|.+++|+|++++|++++.|+.|++|+++. ........+..|...+.+++|+| +++++++++.
T Consensus 85 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~--~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~ 161 (337)
T 1gxr_A 85 KSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAA--PTPRIKAELTSSAPACYALAISP-DSKVCFSCCS 161 (337)
T ss_dssp CSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCC--C--EEEEEEECSSSCEEEEEECT-TSSEEEEEET
T ss_pred eeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCC--CCcceeeecccCCCceEEEEECC-CCCEEEEEeC
Confidence 444321 6889999999999999999999999999997653 23446677888999999999997 8999999999
Q ss_pred CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcc
Q psy14906 316 DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKS 395 (583)
Q Consensus 316 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 395 (583)
||.|++||+.+++....+.
T Consensus 162 dg~v~~~d~~~~~~~~~~~------------------------------------------------------------- 180 (337)
T 1gxr_A 162 DGNIAVWDLHNQTLVRQFQ------------------------------------------------------------- 180 (337)
T ss_dssp TSCEEEEETTTTEEEEEEC-------------------------------------------------------------
T ss_pred CCcEEEEeCCCCceeeeee-------------------------------------------------------------
Confidence 9999999998765433221
Q ss_pred cccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEE
Q psy14906 396 KMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI 475 (583)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 475 (583)
.+...+.+++|+|+++++++++.||.|++||+.+++....+ .|...+.+++|+|++++|+
T Consensus 181 --------------~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~ 240 (337)
T 1gxr_A 181 --------------GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH------DFTSQIFSLGYCPTGEWLA 240 (337)
T ss_dssp --------------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE------ECSSCEEEEEECTTSSEEE
T ss_pred --------------cccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeee------cCCCceEEEEECCCCCEEE
Confidence 12257999999999999999999999999999999887776 5778899999999999999
Q ss_pred EeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCC
Q psy14906 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPD 555 (583)
Q Consensus 476 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d 555 (583)
+++.|+.|++||+.+. +......+...+.+++|+|++++|++++.||.|++||+.+++.+... .|...|.+++|+|+
T Consensus 241 ~~~~~~~i~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~ 317 (337)
T 1gxr_A 241 VGMESSNVEVLHVNKP--DKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVD 317 (337)
T ss_dssp EEETTSCEEEEETTSS--CEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTT
T ss_pred EEcCCCcEEEEECCCC--CeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCC
Confidence 9999999999999987 66666667789999999999999999999999999999999888554 48899999999999
Q ss_pred CcEEEEEeCCCeEEEEeC
Q psy14906 556 SRWLITASMDCTIRVWDI 573 (583)
Q Consensus 556 ~~~l~s~~~d~~i~vw~~ 573 (583)
+++|++++.||.|++|++
T Consensus 318 ~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 318 DKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp SCEEEEEETTSCEEEEEE
T ss_pred CCEEEEecCCCeEEEEEE
Confidence 999999999999999997
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-44 Score=339.60 Aligned_cols=295 Identities=16% Similarity=0.221 Sum_probs=242.9
Q ss_pred cCCcceEEEee-----CC-CCCEEEEEecCCeEEEEEccCC-------ceeEEEeccCCCeEEEEEecCCCCEEEEEcCC
Q psy14906 160 RWNSCVNVLEP-----SP-VVDIIGVGLSNKKIILHNILTD-------ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT 226 (583)
Q Consensus 160 ~~~~~i~~~~~-----s~-~~~~l~~~~~d~~i~iw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 226 (583)
+|...|++++| ++ ++++|++|+.|++|++||+.++ .+...+.+|...|.+++|+|++. ++++++.|
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~-~l~s~s~D 97 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENC-FAISSSWD 97 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTT-EEEEEETT
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCC-EEEEEcCC
Confidence 99999999999 76 9999999999999999999753 45677889999999999999998 89999999
Q ss_pred CcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEe---ccCCCCCeeEEEe
Q psy14906 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIR---EGHSAPPNYIQFY 303 (583)
Q Consensus 227 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~---~~~~~~v~~~~~~ 303 (583)
++|++||+++++.+..+ .+|...|.+++|+|++++|++++.|+.|++||+. ....... .+|...|.+++|+
T Consensus 98 ~~v~lwd~~~~~~~~~~-~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~-----~~~~~~~~~~~~~~~~v~~~~~~ 171 (343)
T 2xzm_R 98 KTLRLWDLRTGTTYKRF-VGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL-----GECKFSSAEKENHSDWVSCVRYS 171 (343)
T ss_dssp SEEEEEETTSSCEEEEE-ECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS-----SCEEEECCTTTSCSSCEEEEEEC
T ss_pred CcEEEEECCCCcEEEEE-cCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc-----CCceeeeecccCCCceeeeeeec
Confidence 99999999999998888 7999999999999999999999999999999764 1222222 3677888888888
Q ss_pred eCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecC
Q psy14906 304 GNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTG 383 (583)
Q Consensus 304 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (583)
| ++...
T Consensus 172 ~-~~~~~------------------------------------------------------------------------- 177 (343)
T 2xzm_R 172 P-IMKSA------------------------------------------------------------------------- 177 (343)
T ss_dssp C-CCCSC-------------------------------------------------------------------------
T ss_pred c-ccccc-------------------------------------------------------------------------
Confidence 6 33100
Q ss_pred CceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCee
Q psy14906 384 KNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVR 463 (583)
Q Consensus 384 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~ 463 (583)
..+.|.+.++++++.||.|++||. ..+....+ .+|...|.
T Consensus 178 ----------------------------------~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~-----~~h~~~v~ 217 (343)
T 2xzm_R 178 ----------------------------------NKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTF-----KAHESNVN 217 (343)
T ss_dssp ----------------------------------SCCCSSCCEEEEEETTSEEEEEET-TTEEEEEE-----ECCSSCEE
T ss_pred ----------------------------------cccCCCCCEEEEEcCCCEEEEEcC-CCceeEEE-----cCccccce
Confidence 001234467777777777777773 33444444 68999999
Q ss_pred EEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEE--eec
Q psy14906 464 GVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIR--KLS 541 (583)
Q Consensus 464 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~ 541 (583)
+++|+|++++|++++.||.|++||+.... .....+.....|.+++|+|++++++++ .|+.|++||+.+++... .+.
T Consensus 218 ~~~~s~~g~~l~sgs~dg~v~iwd~~~~~-~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~ 295 (343)
T 2xzm_R 218 HLSISPNGKYIATGGKDKKLLIWDILNLT-YPQREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIE 295 (343)
T ss_dssp EEEECTTSSEEEEEETTCEEEEEESSCCS-SCSEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECC
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCc-ccceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEee
Confidence 99999999999999999999999995432 455666667789999999999988765 57789999998776433 333
Q ss_pred -----------ccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCcc
Q psy14906 542 -----------GHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 542 -----------~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~ 577 (583)
+|...|.+++|+|+|++|++|+.||+|++|++++++
T Consensus 296 ~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 296 AEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp CCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred cCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 688899999999999999999999999999998764
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-44 Score=333.41 Aligned_cols=300 Identities=17% Similarity=0.233 Sum_probs=235.2
Q ss_pred CCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCC--ceeEEE-ec-cCCCeEEEEEecC
Q psy14906 140 AEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD--ESLMEF-IQ-TWGPVTALSFRTD 215 (583)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~-~~-~~~~v~~~~~~~~ 215 (583)
+.+++.++. +|...|.+++|+|+ +||+|+.|++|++||+.++ +.+..+ .+ |...|.+++|+|+
T Consensus 3 ~~~~~~~~~-----------~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~ 69 (330)
T 2hes_X 3 SINLIKSLK-----------LYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPH 69 (330)
T ss_dssp CCEEEEEEE-----------CCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTT
T ss_pred ccccceeec-----------cCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCC
Confidence 345666676 99999999999987 9999999999999999875 445555 34 8899999999999
Q ss_pred CCCEEEEEcCCCcEEEEeCCC-------CeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeE
Q psy14906 216 GPPMMVSGSNTGHLTVWNLED-------RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLR 288 (583)
Q Consensus 216 ~~~~l~s~~~dg~i~vwd~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~ 288 (583)
++ +|++++.|++|++||+.. .+++..+ .+|...|.+++|+|++++|++++.|++|++||++......+.+.
T Consensus 70 ~~-~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~ 147 (330)
T 2hes_X 70 TS-LLAAGSFDSTVSIWAKEESADRTFEMDLLAII-EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECIS 147 (330)
T ss_dssp SS-EEEEEETTSCEEEEEC-------CCCEEEEEE-C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEE
T ss_pred CC-EEEEEeCCCcEEEEEcccCcCccccceeEEEE-cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEE
Confidence 98 999999999999999853 3455566 78999999999999999999999999999998754333456778
Q ss_pred EeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeec
Q psy14906 289 IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGL 368 (583)
Q Consensus 289 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (583)
.+.+|...|.+++|+| ++.+|++++.|++|++||..++..
T Consensus 148 ~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~iW~~~~~~~--------------------------------------- 187 (330)
T 2hes_X 148 VLQEHSQDVKHVIWHP-SEALLASSSYDDTVRIWKDYDDDW--------------------------------------- 187 (330)
T ss_dssp EECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEE---------------------------------------
T ss_pred EeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCe---------------------------------------
Confidence 8899999999999998 789999999999999999654210
Q ss_pred ccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcccc
Q psy14906 369 AREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRG 448 (583)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~ 448 (583)
+.+.
T Consensus 188 ----------------------------------------------------------------------------~~~~ 191 (330)
T 2hes_X 188 ----------------------------------------------------------------------------ECVA 191 (330)
T ss_dssp ----------------------------------------------------------------------------EEEE
T ss_pred ----------------------------------------------------------------------------eEEE
Confidence 0111
Q ss_pred ccCCCCCCCcccCeeEEEEeCC--CcEEEEeecCCcEEEEEccCCCCC------ceEEee--ccCCeeeEEeccCCcEEE
Q psy14906 449 SYGHDNQPGHVGGVRGVVSDNL--NQIVISGGNDQTVKVWHFKQTGKP------PLRSIK--LDNGISFFRTHQESSMLA 518 (583)
Q Consensus 449 ~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~~~dg~i~iwd~~~~~~~------~~~~~~--~~~~v~~~~~s~~~~~l~ 518 (583)
.+ .+|...|.+++|+|+ +.+|++++.|++|++||+...... +...+. +...|.+++|++++ +|+
T Consensus 192 ~~-----~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~ 265 (330)
T 2hes_X 192 VL-----NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIA 265 (330)
T ss_dssp EE-----CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEE
T ss_pred Ec-----cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEE
Confidence 22 578888999999998 668899999999999998754211 122222 55789999999665 899
Q ss_pred EEeCCceEEEEEccccc--eEE-eeccccc-ceeeEEecC--CCcEEEEEeCCCeEEEEeCCCc
Q psy14906 519 VCLDDFTVNIIDIDTCT--IIR-KLSGHMG-QLTDADFSP--DSRWLITASMDCTIRVWDIPSS 576 (583)
Q Consensus 519 ~~~~dg~i~i~d~~~~~--~~~-~~~~h~~-~v~~l~~s~--d~~~l~s~~~d~~i~vw~~~~~ 576 (583)
+++.||.|++||..+++ ... .+.+|.. .|.+++|+| ++++||+++.||+|++|++++.
T Consensus 266 s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~~ 329 (330)
T 2hes_X 266 SVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEKA 329 (330)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC---
T ss_pred EEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEeccC
Confidence 99999999999998774 333 3467887 899999999 7899999999999999998753
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-46 Score=361.51 Aligned_cols=336 Identities=12% Similarity=0.132 Sum_probs=277.5
Q ss_pred CcceEEEeeCCCCC-EEEEE----------ecCCeEEEEEccCCc---eeEEEeccCCCeEEEEEecCCCCEEEEEcCCC
Q psy14906 162 NSCVNVLEPSPVVD-IIGVG----------LSNKKIILHNILTDE---SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTG 227 (583)
Q Consensus 162 ~~~i~~~~~s~~~~-~l~~~----------~~d~~i~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg 227 (583)
...|.+++|+|+++ +|+++ +.|+.|++||+.+++ .+..+ .|...|.+++|+|+++ +|++++.||
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~-~l~~~~~dg 89 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNK-IIAGALDNG 89 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSS-CEEEEESSS
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCC-eEEEEccCC
Confidence 34688899999987 99999 889999999998875 33333 5778999999999999 899999999
Q ss_pred cEEEEeCCC----CeehhhhhhccccceEEEEEecC-CCEEEEEeCCCeEEEEEccCCCC-----CceeeEEeccCCCCC
Q psy14906 228 HLTVWNLED----RQVENQIKKAHRKVVTGAHFLYN-EPLLVTSSPDNTLKLWIFDKADG-----NGRLLRIREGHSAPP 297 (583)
Q Consensus 228 ~i~vwd~~~----~~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~~w~~~~~~~-----~~~~~~~~~~~~~~v 297 (583)
.|++||+.+ .+.+..+ .+|...|.+++|+|+ +++|++++.|+.|++||+..... ..........|...|
T Consensus 90 ~v~vw~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v 168 (416)
T 2pm9_A 90 SLELYSTNEANNAINSMARF-SNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEV 168 (416)
T ss_dssp CEEEECCSSTTSCCCEEEEC-CCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCC
T ss_pred eEEEeecccccccccchhhc-cCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCe
Confidence 999999987 3466677 789999999999998 89999999999999997754321 111223356789999
Q ss_pred eeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccE
Q psy14906 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNI 377 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (583)
.+++|+|..+.+|++++.||.|++||+++++....+....
T Consensus 169 ~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~---------------------------------------- 208 (416)
T 2pm9_A 169 ISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTS---------------------------------------- 208 (416)
T ss_dssp CEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCC----------------------------------------
T ss_pred eEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccc----------------------------------------
Confidence 9999998447899999999999999998876544331100
Q ss_pred EEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCC-cEEEEEecCc---eEEEEEcccC-ccccccCC
Q psy14906 378 AAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCG-NFVLIGYSSG---HVDRFNIQSG-AHRGSYGH 452 (583)
Q Consensus 378 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg---~i~i~d~~~~-~~~~~~~~ 452 (583)
....+...+.+++|+|++ .++++++.++ .|++||+.++ .....+
T Consensus 209 -----------------------------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~-- 257 (416)
T 2pm9_A 209 -----------------------------PNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTL-- 257 (416)
T ss_dssp -----------------------------CSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCC--
T ss_pred -----------------------------cccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEe--
Confidence 001112679999999997 6899999998 9999999986 455555
Q ss_pred CCCC-CcccCeeEEEEeC-CCcEEEEeecCCcEEEEEccCCCCCceEEeec-cCCeeeEEeccCC-cEEEEEeCCceEEE
Q psy14906 453 DNQP-GHVGGVRGVVSDN-LNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL-DNGISFFRTHQES-SMLAVCLDDFTVNI 528 (583)
Q Consensus 453 ~~~~-~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~s~~~-~~l~~~~~dg~i~i 528 (583)
. +|...|.+++|+| ++++|++++.||.|++||+.++ +++..+.. ...+.+++|+|++ ++|++++.|+.|++
T Consensus 258 ---~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~--~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~i 332 (416)
T 2pm9_A 258 ---NQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA--EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEV 332 (416)
T ss_dssp ---CSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC--CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEE
T ss_pred ---ecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC--ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEE
Confidence 5 8999999999999 9999999999999999999988 77777764 5689999999999 89999999999999
Q ss_pred EEccccceEEeec-----------------------------------ccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 529 IDIDTCTIIRKLS-----------------------------------GHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 529 ~d~~~~~~~~~~~-----------------------------------~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
||+.+++...... .|..++.+++|+|||++|++++.|+.|+||++
T Consensus 333 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~ 412 (416)
T 2pm9_A 333 QTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNP 412 (416)
T ss_dssp EESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCC
T ss_pred EEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEe
Confidence 9998765432221 16778889999999999999999999999999
Q ss_pred CCc
Q psy14906 574 PSS 576 (583)
Q Consensus 574 ~~~ 576 (583)
.+.
T Consensus 413 ~~~ 415 (416)
T 2pm9_A 413 KIS 415 (416)
T ss_dssp CCC
T ss_pred ccC
Confidence 875
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-44 Score=350.75 Aligned_cols=347 Identities=15% Similarity=0.091 Sum_probs=279.7
Q ss_pred eEEEEeccce-eeeeecccCccEEEE--ccCCC-EEEEEeCCCcEEEEEc----CCCc------EEEEeeccCCceEEec
Q psy14906 93 IIYAWRRGID-IVGTYKGHTSPVHLI--LPFGP-HLISVDEESNVKVWDI----KAEE------TYLELSFDNDTFKIMG 158 (583)
Q Consensus 93 ~i~vw~~~~~-~~~~~~~h~~~v~~i--s~~~~-~l~s~~~dg~i~iwd~----~~~~------~~~~~~~~~~~~~~~~ 158 (583)
.+.+|+.+.. .......|.++|+++ +|+++ +||+++.||.|++||+ .+++ ....+........ ..
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 104 (425)
T 1r5m_A 26 IDSSDDLDGFVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSA-SS 104 (425)
T ss_dssp --------CCCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC----
T ss_pred ccccccchhhhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccc-cc
Confidence 4567776432 222334566889987 99999 9999999999999999 8887 3444431110000 00
Q ss_pred ccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 159 KRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 159 ~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
.+|...|.+++|+|++++|++++.||.|++|| .+++.+..+..|...|.+++|+|+++ +|++++.|+.|++||+.+++
T Consensus 105 ~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~ 182 (425)
T 1r5m_A 105 GKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGT-HIISMDVENVTILWNVISGT 182 (425)
T ss_dssp ---CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSS-EEEEEETTCCEEEEETTTTE
T ss_pred cCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCC-EEEEEecCCeEEEEECCCCc
Confidence 12678999999999999999999999999999 67889999999999999999999999 89999999999999999998
Q ss_pred ehhhhhhccccc---------------eEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEe
Q psy14906 239 VENQIKKAHRKV---------------VTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFY 303 (583)
Q Consensus 239 ~~~~~~~~~~~~---------------v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 303 (583)
.+..+ ..+... +.+++|+|++ .+++++.++.|++|++. ....+..+..|...|.+++|+
T Consensus 183 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~----~~~~~~~~~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 183 VMQHF-ELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQIT----EKTPTGKLIGHHGPISVLEFN 256 (425)
T ss_dssp EEEEE-CCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETT----CSSCSEEECCCSSCEEEEEEE
T ss_pred EEEEe-eccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcC----CCceeeeeccCCCceEEEEEC
Confidence 88877 566655 9999999985 58888999999999775 346667788899999999999
Q ss_pred eCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecC
Q psy14906 304 GNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTG 383 (583)
Q Consensus 304 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (583)
| ++++|++++.|+.|++||+.+++....+.
T Consensus 257 ~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~------------------------------------------------- 286 (425)
T 1r5m_A 257 D-TNKLLLSASDDGTLRIWHGGNGNSQNCFY------------------------------------------------- 286 (425)
T ss_dssp T-TTTEEEEEETTSCEEEECSSSBSCSEEEC-------------------------------------------------
T ss_pred C-CCCEEEEEcCCCEEEEEECCCCccceEec-------------------------------------------------
Confidence 7 78999999999999999998765543321
Q ss_pred CceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCee
Q psy14906 384 KNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVR 463 (583)
Q Consensus 384 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~ 463 (583)
.+...+.+++|+|++ ++++++.||.|++||+.+++....+ ..|...|.
T Consensus 287 --------------------------~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~-----~~~~~~i~ 334 (425)
T 1r5m_A 287 --------------------------GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALS-----IVDGVPIF 334 (425)
T ss_dssp --------------------------CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEE-----ECTTCCEE
T ss_pred --------------------------CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEec-----ccCCccEE
Confidence 112578999999999 9999999999999999999988887 68899999
Q ss_pred EEEEeCCCcEEEEeecCCcEEEEEccCCCCC--------------------ceEEeecc--C-CeeeEEeccCCcEEEEE
Q psy14906 464 GVVSDNLNQIVISGGNDQTVKVWHFKQTGKP--------------------PLRSIKLD--N-GISFFRTHQESSMLAVC 520 (583)
Q Consensus 464 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~--------------------~~~~~~~~--~-~v~~~~~s~~~~~l~~~ 520 (583)
+++|+|++++|++++.||.|++||+.+. . ++..+..+ . .|.+++|+|++++|+++
T Consensus 335 ~~~~s~~~~~l~~~~~dg~i~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 412 (425)
T 1r5m_A 335 AGRISQDGQKYAVAFMDGQVNVYDLKKL--NSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVA 412 (425)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEECHHH--HC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEE
T ss_pred EEEEcCCCCEEEEEECCCeEEEEECCCC--ccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEE
Confidence 9999999999999999999999999876 4 56666655 4 89999999999999999
Q ss_pred eCCceEEEEEcc
Q psy14906 521 LDDFTVNIIDID 532 (583)
Q Consensus 521 ~~dg~i~i~d~~ 532 (583)
+.||.|++||++
T Consensus 413 ~~dg~i~iw~~~ 424 (425)
T 1r5m_A 413 YSLQEGSVVAIP 424 (425)
T ss_dssp ESSSCCEEEECC
T ss_pred ecCceEEEEeec
Confidence 999999999985
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-44 Score=334.99 Aligned_cols=304 Identities=14% Similarity=0.165 Sum_probs=233.7
Q ss_pred EEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe-------e---hhhhhhccccceEEEE
Q psy14906 186 IILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ-------V---ENQIKKAHRKVVTGAH 255 (583)
Q Consensus 186 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-------~---~~~~~~~~~~~v~~~~ 255 (583)
.+.|++....+ ..+...|.+++|+|||+ +|++++ |+++++||..... . .......|...|.+++
T Consensus 16 ~r~w~~~~~~~----~~~~~~v~~~~fs~dG~-~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 89 (344)
T 4gqb_B 16 AREWNLPPNAP----ACMERQLEAARYRSDGA-LLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLT 89 (344)
T ss_dssp -------CCSC----SSCCSEEEEEEECTTSC-EEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEE
T ss_pred ccccCCCCCCc----ccccCCEEEEEECCCCC-EEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEE
Confidence 35677654433 24557799999999999 777776 7788888732110 0 0011124567899999
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeecc
Q psy14906 256 FLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGI 335 (583)
Q Consensus 256 ~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 335 (583)
|+|++ .|++++.||+|++||++...........+.+|...|.+++|+| ++++|++++.|++|++||+.+++....+
T Consensus 90 ~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~~~~-- 165 (344)
T 4gqb_B 90 WVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVLSSY-- 165 (344)
T ss_dssp EETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEE--
T ss_pred EeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEE--
Confidence 99985 6889999999999988644322233345668999999999997 8999999999999999999887655433
Q ss_pred chhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCc
Q psy14906 336 ASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKP 415 (583)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i 415 (583)
..|...|
T Consensus 166 -------------------------------------------------------------------------~~h~~~V 172 (344)
T 4gqb_B 166 -------------------------------------------------------------------------RAHAAQV 172 (344)
T ss_dssp -------------------------------------------------------------------------CCCSSCE
T ss_pred -------------------------------------------------------------------------cCcCCce
Confidence 1123679
Q ss_pred eEEEEccCCc-EEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCC-CcEEEEeecCCcEEEEEccCCCC
Q psy14906 416 TCVYITHCGN-FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNL-NQIVISGGNDQTVKVWHFKQTGK 493 (583)
Q Consensus 416 ~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~~ 493 (583)
.+++|+|++. ++++++.|+.|++||+++++....+.. ..|...+.+++|+|+ +++|++|+.||.|++||++++
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~-- 247 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC---SAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST-- 247 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---
T ss_pred EEEEecCCCCCceeeeccccccccccccccceeeeeec---ceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC--
Confidence 9999999984 788999999999999999988877633 356678999999995 568899999999999999988
Q ss_pred CceEEeec-cCCeeeEEeccCC-cEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCc-EEEEEeCCCeEEE
Q psy14906 494 PPLRSIKL-DNGISFFRTHQES-SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSR-WLITASMDCTIRV 570 (583)
Q Consensus 494 ~~~~~~~~-~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~-~l~s~~~d~~i~v 570 (583)
+++..+.. ...|.+++|+|++ ++||+|+.|++|+|||+.+++++ .+.+|.+.|++++|+|+++ +|++++.|++|++
T Consensus 248 ~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~ 326 (344)
T 4gqb_B 248 SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVH 326 (344)
T ss_dssp -CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEE
T ss_pred cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEE
Confidence 77777764 5789999999998 58999999999999999988765 5789999999999999986 5779999999999
Q ss_pred EeCCCccc
Q psy14906 571 WDIPSSQL 578 (583)
Q Consensus 571 w~~~~~~~ 578 (583)
|++.+..+
T Consensus 327 w~v~~~~~ 334 (344)
T 4gqb_B 327 HVVPTEPL 334 (344)
T ss_dssp EECCC---
T ss_pred EECCCCCC
Confidence 99987643
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-43 Score=332.88 Aligned_cols=296 Identities=19% Similarity=0.246 Sum_probs=246.0
Q ss_pred ceeeeeecccCccEEEE-------cc-CCCEEEEEeCCCcEEEEEcCCC-------cEEEEeeccCCceEEecccCCcce
Q psy14906 101 IDIVGTYKGHTSPVHLI-------LP-FGPHLISVDEESNVKVWDIKAE-------ETYLELSFDNDTFKIMGKRWNSCV 165 (583)
Q Consensus 101 ~~~~~~~~~h~~~v~~i-------s~-~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~i 165 (583)
.+....+++|.+.|+++ ++ ++++|++|+.|++|++||+.++ .....+. +|...|
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~-----------~h~~~V 79 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALT-----------GHNHFV 79 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEEC-----------CCSSCE
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhc-----------cCCCce
Confidence 35667889999999997 34 8999999999999999999754 3445555 899999
Q ss_pred EEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhh-hh
Q psy14906 166 NVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ-IK 244 (583)
Q Consensus 166 ~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~-~~ 244 (583)
.+++|+|++.+|++|+.|++|++||+++++.+..+.+|...|.+++|+|+++ +|++++.|+.|++||+........ ..
T Consensus 80 ~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~~~d~~i~~wd~~~~~~~~~~~~ 158 (343)
T 2xzm_R 80 SDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNR-QILSAGAEREIKLWNILGECKFSSAEK 158 (343)
T ss_dssp EEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTT-EEEEEETTSCEEEEESSSCEEEECCTT
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCC-EEEEEcCCCEEEEEeccCCceeeeecc
Confidence 9999999999999999999999999999999999999999999999999999 899999999999999984432211 11
Q ss_pred hccccceEEEEEecCC----------CEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee
Q psy14906 245 KAHRKVVTGAHFLYNE----------PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 245 ~~~~~~v~~~~~~~~~----------~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 314 (583)
.+|...|.+++|+|++ .+|++++.|+.|++||. .......+.+|...|.+++|+| ++++|++++
T Consensus 159 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-----~~~~~~~~~~h~~~v~~~~~s~-~g~~l~sgs 232 (343)
T 2xzm_R 159 ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-----NFQIRYTFKAHESNVNHLSISP-NGKYIATGG 232 (343)
T ss_dssp TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-----TTEEEEEEECCSSCEEEEEECT-TSSEEEEEE
T ss_pred cCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-----CCceeEEEcCccccceEEEECC-CCCEEEEEc
Confidence 4788999999999987 78999999999999973 4566778889999999999997 899999999
Q ss_pred CCCcEEEEEcccccc-ceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecC
Q psy14906 315 GDSTLRIFNTKSETS-NKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFY 393 (583)
Q Consensus 315 ~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 393 (583)
.||.|++||+..... ...+.
T Consensus 233 ~dg~v~iwd~~~~~~~~~~~~----------------------------------------------------------- 253 (343)
T 2xzm_R 233 KDKKLLIWDILNLTYPQREFD----------------------------------------------------------- 253 (343)
T ss_dssp TTCEEEEEESSCCSSCSEEEE-----------------------------------------------------------
T ss_pred CCCeEEEEECCCCcccceeec-----------------------------------------------------------
Confidence 999999999853221 11100
Q ss_pred cccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcccc--ccCCC------CCCCcccCeeEE
Q psy14906 394 KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRG--SYGHD------NQPGHVGGVRGV 465 (583)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~------~~~~h~~~v~~~ 465 (583)
+...+.+++|+|++++++++ .|+.|++|++.+++... .+... ...+|...|.++
T Consensus 254 -----------------~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 315 (343)
T 2xzm_R 254 -----------------AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSL 315 (343)
T ss_dssp -----------------CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEE
T ss_pred -----------------CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEE
Confidence 01458999999999988766 57779999998776544 22110 113788899999
Q ss_pred EEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 466 VSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 466 ~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
+|+|++++|++|+.||.|++|+++++
T Consensus 316 ~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 316 AWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp EECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred EECCCCCeEEEecCCceEEEEEEEcc
Confidence 99999999999999999999998764
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-43 Score=327.50 Aligned_cols=285 Identities=20% Similarity=0.295 Sum_probs=248.1
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
+|...|.+++|+|++++|++++.||.|++|++.+++....+.+|...|.+++|+|+++ +|++++.|+.|++||+++++.
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~i~vwd~~~~~~ 99 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGKC 99 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCE
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCC-EEEEECCCCEEEEEECCCCcE
Confidence 8999999999999999999999999999999999999999999999999999999998 999999999999999999999
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
+..+ .+|...|.+++|+|++++|++++.|+.|++||+. ..+.+..+..|..+|.+++|+| ++++|++++.||.|
T Consensus 100 ~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~----~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i 173 (312)
T 4ery_A 100 LKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK----TGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLC 173 (312)
T ss_dssp EEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred EEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC----CCEEEEEecCCCCcEEEEEEcC-CCCEEEEEeCCCcE
Confidence 8888 7899999999999999999999999999999775 4567778888888999999987 78889999999999
Q ss_pred EEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 320 RIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 320 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
++||+.+++....
T Consensus 174 ~~wd~~~~~~~~~------------------------------------------------------------------- 186 (312)
T 4ery_A 174 RIWDTASGQCLKT------------------------------------------------------------------- 186 (312)
T ss_dssp EEEETTTCCEEEE-------------------------------------------------------------------
T ss_pred EEEECCCCceeeE-------------------------------------------------------------------
Confidence 9998765432111
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN 479 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 479 (583)
+. ..+...+..++|+|++++|++++.
T Consensus 187 --------------------------------------------------~~----~~~~~~~~~~~~~~~~~~l~~~~~ 212 (312)
T 4ery_A 187 --------------------------------------------------LI----DDDNPPVSFVKFSPNGKYILAATL 212 (312)
T ss_dssp --------------------------------------------------EC----CSSCCCEEEEEECTTSSEEEEEET
T ss_pred --------------------------------------------------Ee----ccCCCceEEEEECCCCCEEEEEcC
Confidence 10 245567888899999999999999
Q ss_pred CCcEEEEEccCCCCCceEEeeccC-C---eeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCC
Q psy14906 480 DQTVKVWHFKQTGKPPLRSIKLDN-G---ISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPD 555 (583)
Q Consensus 480 dg~i~iwd~~~~~~~~~~~~~~~~-~---v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d 555 (583)
|+.|++||+.++ +++..+..+. . +......+++.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+|+
T Consensus 213 d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~ 290 (312)
T 4ery_A 213 DNTLKLWDYSKG--KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPT 290 (312)
T ss_dssp TTEEEEEETTTT--EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSS
T ss_pred CCeEEEEECCCC--cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCc
Confidence 999999998877 6666665432 2 222333467889999999999999999999999999999999999999999
Q ss_pred CcEEEEEe--CCCeEEEEeCC
Q psy14906 556 SRWLITAS--MDCTIRVWDIP 574 (583)
Q Consensus 556 ~~~l~s~~--~d~~i~vw~~~ 574 (583)
+++|++++ .|++|++|+.+
T Consensus 291 ~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 291 ENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SSEEEEEECTTTCCEEEEECC
T ss_pred CCceEEEEccCCccEEEecCC
Confidence 99999987 69999999964
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-44 Score=337.85 Aligned_cols=320 Identities=12% Similarity=0.160 Sum_probs=275.6
Q ss_pred cCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEE
Q psy14906 110 HTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKII 187 (583)
Q Consensus 110 h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~ 187 (583)
|.++|.++ +|||++++++..++.+..|+........... .|...|.+++|+|++++|++++ ||.|+
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~h~~~v~~~~~~~~~~~l~~~~-dg~i~ 75 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL-----------NHGEVVCAVTISNPTRHVYTGG-KGCVK 75 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEE-----------CCSSCCCEEEECSSSSEEEEEC-BSEEE
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceec-----------cCCCceEEEEEecCCcEEEEcC-CCeEE
Confidence 34455554 9999999998888877777666554444444 8899999999999999999998 99999
Q ss_pred EEEccCCce---eEEEe--ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe--ehhhhhhccccceEEEEEecCC
Q psy14906 188 LHNILTDES---LMEFI--QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ--VENQIKKAHRKVVTGAHFLYNE 260 (583)
Q Consensus 188 iw~~~~~~~---~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~ 260 (583)
+||+.+++. +..+. .|...|.+++|+|+++ +|++++.|+.|++||+.+++ ....+ ..|...|.+++|+|++
T Consensus 76 iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~~~~~i~~~~~~~~~ 153 (337)
T 1gxr_A 76 VWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC-TLIVGGEASTLSIWDLAAPTPRIKAEL-TSSAPACYALAISPDS 153 (337)
T ss_dssp EEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS-EEEEEESSSEEEEEECCCC--EEEEEE-ECSSSCEEEEEECTTS
T ss_pred EEECCCCCceeeeecccccCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCCcceeeec-ccCCCceEEEEECCCC
Confidence 999987653 33333 7889999999999998 89999999999999999876 45555 6789999999999999
Q ss_pred CEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhh
Q psy14906 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANR 340 (583)
Q Consensus 261 ~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 340 (583)
++|++++.|+.|++|++. ..+.+..+..|...+.+++|+| ++++|++++.||.|++||+++++....+.
T Consensus 154 ~~l~~~~~dg~v~~~d~~----~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~------ 222 (337)
T 1gxr_A 154 KVCFSCCSDGNIAVWDLH----NQTLVRQFQGHTDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQLQQHD------ 222 (337)
T ss_dssp SEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEE------
T ss_pred CEEEEEeCCCcEEEEeCC----CCceeeeeecccCceEEEEECC-CCCEEEEEecCCcEEEEECCCCceEeeec------
Confidence 999999999999999775 4677888889999999999997 79999999999999999998765433221
Q ss_pred hhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEE
Q psy14906 341 NNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYI 420 (583)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 420 (583)
+...+.+++|
T Consensus 223 ----------------------------------------------------------------------~~~~v~~~~~ 232 (337)
T 1gxr_A 223 ----------------------------------------------------------------------FTSQIFSLGY 232 (337)
T ss_dssp ----------------------------------------------------------------------CSSCEEEEEE
T ss_pred ----------------------------------------------------------------------CCCceEEEEE
Confidence 1156889999
Q ss_pred ccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee
Q psy14906 421 THCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK 500 (583)
Q Consensus 421 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 500 (583)
+|+++++++++.+|.|++||+.+++... + ..|...|.+++|+|++++|++++.||.|++||+.++ +.+....
T Consensus 233 s~~~~~l~~~~~~~~i~~~~~~~~~~~~-~-----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~--~~~~~~~ 304 (337)
T 1gxr_A 233 CPTGEWLAVGMESSNVEVLHVNKPDKYQ-L-----HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG--ASIFQSK 304 (337)
T ss_dssp CTTSSEEEEEETTSCEEEEETTSSCEEE-E-----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--CEEEEEE
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCCeEE-E-----cCCccceeEEEECCCCCEEEEecCCCcEEEEECCCC--eEEEEec
Confidence 9999999999999999999999887643 3 589999999999999999999999999999999998 7777778
Q ss_pred ccCCeeeEEeccCCcEEEEEeCCceEEEEEcc
Q psy14906 501 LDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 501 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 532 (583)
+...+.+++|+|++++|++++.||.|++|++.
T Consensus 305 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 305 ESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 88999999999999999999999999999963
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-43 Score=324.35 Aligned_cols=295 Identities=20% Similarity=0.319 Sum_probs=256.8
Q ss_pred cceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEE
Q psy14906 100 GIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDII 177 (583)
Q Consensus 100 ~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 177 (583)
.......+.+|...|+++ +|++++|++++.||.|++|++.+++....+. +|...|.+++|+|++++|
T Consensus 12 ~~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~-----------~h~~~v~~~~~~~~~~~l 80 (312)
T 4ery_A 12 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-----------GHKLGISDVAWSSDSNLL 80 (312)
T ss_dssp CCEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-----------CCSSCEEEEEECTTSSEE
T ss_pred CceeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhc-----------cCCCceEEEEEcCCCCEE
Confidence 345677889999999997 9999999999999999999999999988887 899999999999999999
Q ss_pred EEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEe
Q psy14906 178 GVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL 257 (583)
Q Consensus 178 ~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~ 257 (583)
++++.|+.|++||+.+++.+..+.+|...|.+++|+|+++ +|++++.|+.|++||+++++.+..+ ..|...|.+++|+
T Consensus 81 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~ 158 (312)
T 4ery_A 81 VSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGKCLKTL-PAHSDPVSAVHFN 158 (312)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCEEEEE-CCCSSCEEEEEEC
T ss_pred EEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcEEEEEEc
Confidence 9999999999999999999999999999999999999998 9999999999999999999988888 7899999999999
Q ss_pred cCCCEEEEEeCCCeEEEEEccCCCCCceeeEEe-ccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccc
Q psy14906 258 YNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIR-EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIA 336 (583)
Q Consensus 258 ~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 336 (583)
|++++|++++.|+.|++||+. ..+.+..+ ..+...+..++|+| ++++|++++.|+.|++||+.+++....+...
T Consensus 159 ~~~~~l~~~~~d~~i~~wd~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 233 (312)
T 4ery_A 159 RDGSLIVSSSYDGLCRIWDTA----SGQCLKTLIDDDNPPVSFVKFSP-NGKYILAATLDNTLKLWDYSKGKCLKTYTGH 233 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETT----TCCEEEEECCSSCCCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEEEEEECSS
T ss_pred CCCCEEEEEeCCCcEEEEECC----CCceeeEEeccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEEec
Confidence 999999999999999999765 33444443 45667899999997 8999999999999999999887654433110
Q ss_pred hhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCce
Q psy14906 337 SANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT 416 (583)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 416 (583)
. .....+.
T Consensus 234 ~------------------------------------------------------------------------~~~~~~~ 241 (312)
T 4ery_A 234 K------------------------------------------------------------------------NEKYCIF 241 (312)
T ss_dssp C------------------------------------------------------------------------CSSSCCC
T ss_pred C------------------------------------------------------------------------CceEEEE
Confidence 0 0001122
Q ss_pred EEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee--cCCcEEEEEcc
Q psy14906 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG--NDQTVKVWHFK 489 (583)
Q Consensus 417 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~--~dg~i~iwd~~ 489 (583)
.....++++++++|+.||.|++||+.+++....+ .+|...|.+++|+|+++++++++ .|++|++|+.+
T Consensus 242 ~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-----~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 242 ANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKL-----QGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEECSSSCEEEECCTTSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEEeCCCcEEEEECCCCEEEEEECCCchhhhhh-----hccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 3334467899999999999999999999998888 79999999999999999999987 69999999864
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-43 Score=337.45 Aligned_cols=291 Identities=20% Similarity=0.350 Sum_probs=244.8
Q ss_pred ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccc------------------cceEEEEEecCCCEE
Q psy14906 202 QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHR------------------KVVTGAHFLYNEPLL 263 (583)
Q Consensus 202 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~------------------~~v~~~~~~~~~~~l 263 (583)
.|...|.+++|+|+|+ +|++|+ ++.+++|++.+++.+..+ ..|. ..|.+++|+|++++|
T Consensus 62 ~h~~~V~~v~fspdg~-~la~g~-~~~v~i~~~~~g~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGE-YLATGC-NKTTQVYRVSDGSLVARL-SDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp ECSSCCCEEEECTTSS-EEEEEC-BSCEEEEETTTCCEEEEE-CC-----------------CCCCBEEEEEECTTSSEE
T ss_pred CCCCEEEEEEECCCCC-EEEEEc-CCcEEEEEecCCCEEEEe-cCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 6889999999999999 888877 689999999998876665 3332 249999999999999
Q ss_pred EEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhh
Q psy14906 264 VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNL 343 (583)
Q Consensus 264 ~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 343 (583)
++++.|+.|++||++ ..+.+..+.+|...|.+++|+| ++++|++++.|++|++||+++++....+..
T Consensus 139 ~s~~~d~~i~iwd~~----~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-------- 205 (393)
T 1erj_A 139 ATGAEDRLIRIWDIE----NRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQCSLTLSI-------- 205 (393)
T ss_dssp EEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEEC--------
T ss_pred EEEcCCCeEEEEECC----CCcEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCeeEEEEEc--------
Confidence 999999999999775 5677888999999999999997 899999999999999999987754332210
Q ss_pred hhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc-
Q psy14906 344 KRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH- 422 (583)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~- 422 (583)
...+.+++++|
T Consensus 206 --------------------------------------------------------------------~~~v~~~~~~~~ 217 (393)
T 1erj_A 206 --------------------------------------------------------------------EDGVTTVAVSPG 217 (393)
T ss_dssp --------------------------------------------------------------------SSCEEEEEECST
T ss_pred --------------------------------------------------------------------CCCcEEEEEECC
Confidence 14588999999
Q ss_pred CCcEEEEEecCceEEEEEcccCccccccCCC--CCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCC-------
Q psy14906 423 CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHD--NQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK------- 493 (583)
Q Consensus 423 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~------- 493 (583)
+++++++|+.||.|++||+.++.....+... ...+|...|.+++|+|++++|++++.|+.|++||+.....
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 8999999999999999999998876655221 1147999999999999999999999999999999976411
Q ss_pred ---CceEEe-eccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecC------CCcEEEEEe
Q psy14906 494 ---PPLRSI-KLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSP------DSRWLITAS 563 (583)
Q Consensus 494 ---~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~------d~~~l~s~~ 563 (583)
.+...+ .+...|.+++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|++ ++++||+|+
T Consensus 298 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs 377 (393)
T 1erj_A 298 NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 377 (393)
T ss_dssp ---CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred CCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEEC
Confidence 122233 3556899999999999999999999999999999999999999999999999886 689999999
Q ss_pred CCCeEEEEeCCCc
Q psy14906 564 MDCTIRVWDIPSS 576 (583)
Q Consensus 564 ~d~~i~vw~~~~~ 576 (583)
.|++|++|++...
T Consensus 378 ~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 378 GDCKARIWKYKKI 390 (393)
T ss_dssp TTSEEEEEEEEEC
T ss_pred CCCcEEECccccc
Confidence 9999999998654
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=338.12 Aligned_cols=319 Identities=22% Similarity=0.335 Sum_probs=279.3
Q ss_pred eeeeecccCcc-EEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe
Q psy14906 103 IVGTYKGHTSP-VHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL 181 (583)
Q Consensus 103 ~~~~~~~h~~~-v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 181 (583)
..+.+.+|.+. +.+++++|++|++++.||+|++||+.+++.+..+. +|...|.+++|+ +++|++|+
T Consensus 110 ~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~-----------~h~~~v~~~~~~--~~~l~s~~ 176 (445)
T 2ovr_B 110 SPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV-----------GHTGGVWSSQMR--DNIIISGS 176 (445)
T ss_dssp CCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECC-----------CCSSCEEEEEEE--TTEEEEEE
T ss_pred eeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEc-----------CCCCCEEEEEec--CCEEEEEe
Confidence 46678899887 46789999999999999999999999999999887 999999999998 67999999
Q ss_pred cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCC
Q psy14906 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEP 261 (583)
Q Consensus 182 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 261 (583)
.||.|++||+.+++.+..+.+|...|.+++|++ + .+++|+.||.|++||+.+++.+..+ .+|...|.+++| +++
T Consensus 177 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~i~~wd~~~~~~~~~~-~~~~~~v~~~~~--~~~ 250 (445)
T 2ovr_B 177 TDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--K-RVVSGSRDATLRVWDIETGQCLHVL-MGHVAAVRCVQY--DGR 250 (445)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEESSSCCEEEEE-ECCSSCEEEEEE--CSS
T ss_pred CCCeEEEEECCcCcEEEEECCCCCcEEEEEecC--C-EEEEEeCCCEEEEEECCCCcEEEEE-cCCcccEEEEEE--CCC
Confidence 999999999999999999999999999999964 3 7999999999999999999998888 789999999998 788
Q ss_pred EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhh
Q psy14906 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341 (583)
Q Consensus 262 ~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 341 (583)
++++++.|+.|++||+. ..+.+..+.+|...|.++.| ++.++++++.||.|++||+.+++.
T Consensus 251 ~l~~~~~dg~i~iwd~~----~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~------------ 311 (445)
T 2ovr_B 251 RVVSGAYDFMVKVWDPE----TETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNC------------ 311 (445)
T ss_dssp CEEEEETTSCEEEEEGG----GTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCE------------
T ss_pred EEEEEcCCCEEEEEECC----CCcEeEEecCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCE------------
Confidence 99999999999999876 45777888888888888888 567888888888888888765432
Q ss_pred hhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEc
Q psy14906 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYIT 421 (583)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 421 (583)
T Consensus 312 -------------------------------------------------------------------------------- 311 (445)
T 2ovr_B 312 -------------------------------------------------------------------------------- 311 (445)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee-
Q psy14906 422 HCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK- 500 (583)
Q Consensus 422 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~- 500 (583)
...+ .+|...+.++.+ +++++++++.||.|++||+.++ +.+..+.
T Consensus 312 -------------------------~~~~-----~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~--~~~~~~~~ 357 (445)
T 2ovr_B 312 -------------------------IHTL-----TGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTG--QCLQTLQG 357 (445)
T ss_dssp -------------------------EEEE-----CCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTC--CEEEEECS
T ss_pred -------------------------EEEE-----cCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCC--cEEEEEcc
Confidence 1122 467777877777 4568999999999999999888 7777776
Q ss_pred ---ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEee-----cccccceeeEEecCCCcEEEEEeCCCe----E
Q psy14906 501 ---LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKL-----SGHMGQLTDADFSPDSRWLITASMDCT----I 568 (583)
Q Consensus 501 ---~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~h~~~v~~l~~s~d~~~l~s~~~d~~----i 568 (583)
+...|.+++|+ +++|++|+.||.|++||+.+++.+..+ .+|.+.|++++|+|++.+|++++.||+ |
T Consensus 358 ~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l 435 (445)
T 2ovr_B 358 PNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 435 (445)
T ss_dssp TTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEE
T ss_pred CCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEE
Confidence 45689999995 689999999999999999999998887 478899999999999999999999997 9
Q ss_pred EEEeCCC
Q psy14906 569 RVWDIPS 575 (583)
Q Consensus 569 ~vw~~~~ 575 (583)
.+||+..
T Consensus 436 ~v~df~~ 442 (445)
T 2ovr_B 436 LVLDFDV 442 (445)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999975
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=328.59 Aligned_cols=306 Identities=15% Similarity=0.196 Sum_probs=237.0
Q ss_pred ceeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCc--EEEEeeccCCceEEecccCCcceEEEeeCCCCCEEE
Q psy14906 101 IDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEE--TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIG 178 (583)
Q Consensus 101 ~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 178 (583)
.+.++.+.+|.++|.++..++.+||+++.|++|++||+.++. ....+.. ..|...|.+++|+|++++|+
T Consensus 4 ~~~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~---------~~h~~~v~~v~~sp~~~~la 74 (330)
T 2hes_X 4 INLIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDE---------TAHKKAIRSVAWRPHTSLLA 74 (330)
T ss_dssp CEEEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECT---------TCCCSCEEEEEECTTSSEEE
T ss_pred cccceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEec---------CCccCCEEEEEECCCCCEEE
Confidence 356788999999999985555599999999999999998753 3444421 03899999999999999999
Q ss_pred EEecCCeEEEEEccC-------CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC----eehhhhhhcc
Q psy14906 179 VGLSNKKIILHNILT-------DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR----QVENQIKKAH 247 (583)
Q Consensus 179 ~~~~d~~i~iw~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~ 247 (583)
+|+.|++|++||+.. .+.+..+.+|...|.+++|+|+++ +|++|+.|++|++||+... +++..+ .+|
T Consensus 75 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~~~~~~~~-~~h 152 (330)
T 2hes_X 75 AGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEEYECISVL-QEH 152 (330)
T ss_dssp EEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCCCEEEEEE-CCC
T ss_pred EEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCCeEEEEEe-ccC
Confidence 999999999999853 356777889999999999999999 9999999999999999432 455666 789
Q ss_pred ccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC-CCEEEEeeCCCcEEEEEccc
Q psy14906 248 RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS-SDNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 248 ~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~ 326 (583)
...|.+++|+|++++|++++.|++|++|+.... ....+..+.+|...|.+++|+|.. +.+|++++.|++|++||+..
T Consensus 153 ~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 153 SQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD--DWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEEETT--EEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCceEEEEECCCCCEEEEEcCCCeEEEEECCCC--CeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 999999999999999999999999999976522 346778899999999999999832 56899999999999999875
Q ss_pred cccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccc
Q psy14906 327 ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPER 406 (583)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 406 (583)
+...... .|. ....
T Consensus 231 ~~~~~~~-------------------------------------------------------~~~-----------~~~~ 244 (330)
T 2hes_X 231 DDEDDQQ-------------------------------------------------------EWV-----------CEAI 244 (330)
T ss_dssp ECTTSCE-------------------------------------------------------EEE-----------EEEE
T ss_pred CCccccc-------------------------------------------------------eeE-----------Eeee
Confidence 4211000 000 0000
Q ss_pred ccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcc--ccccCCCCCCCccc-CeeEEEEeC--CCcEEEEeecCC
Q psy14906 407 CKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH--RGSYGHDNQPGHVG-GVRGVVSDN--LNQIVISGGNDQ 481 (583)
Q Consensus 407 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~h~~-~v~~~~~s~--~~~~l~s~~~dg 481 (583)
+...|...+.+++|++++ ++++++.||.|++|+..+++. ..... .+|.. .|.+++|+| ++++|++++.||
T Consensus 245 ~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~----~~h~~~~v~~v~~~~~~~~~~las~s~Dg 319 (330)
T 2hes_X 245 LPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRA----LCHGVYEINVVKWLELNGKTILATGGDDG 319 (330)
T ss_dssp CCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEES----CTTTTSCEEEEEEC-----CCEEEEETTS
T ss_pred cccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccc----cccccceEEEEEEecCCCceEEEEecCCC
Confidence 111233679999999765 899999999999999987642 22221 46876 899999999 689999999999
Q ss_pred cEEEEEccC
Q psy14906 482 TVKVWHFKQ 490 (583)
Q Consensus 482 ~i~iwd~~~ 490 (583)
+|++||++.
T Consensus 320 ~v~~W~~~~ 328 (330)
T 2hes_X 320 IVNFWSLEK 328 (330)
T ss_dssp EEEEEEC--
T ss_pred cEEEEEecc
Confidence 999999865
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=330.33 Aligned_cols=297 Identities=19% Similarity=0.283 Sum_probs=251.3
Q ss_pred CCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe-----ehhhhhhccccceEEEEEecCCCEEEEEe
Q psy14906 193 TDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ-----VENQIKKAHRKVVTGAHFLYNEPLLVTSS 267 (583)
Q Consensus 193 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 267 (583)
+.+...++++|.+.|++++|+|++..+|++|+.|++|++||+.+.+ +...+ .+|...|.+++|+|++++|++++
T Consensus 27 ~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l-~~h~~~V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 27 QMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRAL-RGHSHFVSDVVISSDGQFALSGS 105 (340)
T ss_dssp EEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEE-CCCSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEE-eCCCCCEEEEEECCCCCEEEEEc
Confidence 3455667999999999999999854499999999999999997653 34555 78999999999999999999999
Q ss_pred CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhc
Q psy14906 268 PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKN 347 (583)
Q Consensus 268 ~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 347 (583)
.|+.+++|+.. ..........+...+....+++ ++.+|++++.|+.+++||+.........
T Consensus 106 ~d~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~~~-------------- 166 (340)
T 4aow_A 106 WDGTLRLWDLT----TGTTTRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYTVQ-------------- 166 (340)
T ss_dssp TTSEEEEEETT----TTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEEC--------------
T ss_pred ccccceEEeec----ccceeeeecCCCCceeEEEEee-cCccceeecCCCeEEEEEeCCCceEEEE--------------
Confidence 99999999765 4455666667778888888886 7899999999999999998654321110
Q ss_pred chhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCC--c
Q psy14906 348 RLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCG--N 425 (583)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~--~ 425 (583)
...+...+..++|++++ .
T Consensus 167 ------------------------------------------------------------~~~~~~~v~~~~~~~~~~~~ 186 (340)
T 4aow_A 167 ------------------------------------------------------------DESHSEWVSCVRFSPNSSNP 186 (340)
T ss_dssp ------------------------------------------------------------SSSCSSCEEEEEECSCSSSC
T ss_pred ------------------------------------------------------------eccccCcccceEEccCCCCc
Confidence 11122567888888764 5
Q ss_pred EEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCe
Q psy14906 426 FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGI 505 (583)
Q Consensus 426 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v 505 (583)
++++++.|+.|++||+.+++....+ .+|...|++++|+|++++|++++.||.|++||+.+. +++..+.....+
T Consensus 187 ~~~s~~~d~~i~i~d~~~~~~~~~~-----~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~--~~~~~~~~~~~v 259 (340)
T 4aow_A 187 IIVSCGWDKLVKVWNLANCKLKTNH-----IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG--KHLYTLDGGDII 259 (340)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT--EEEEEEECSSCE
T ss_pred EEEEEcCCCEEEEEECCCCceeeEe-----cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC--ceeeeecCCceE
Confidence 7889999999999999999998888 789999999999999999999999999999999998 888889999999
Q ss_pred eeEEeccCCcEEEEEeCCceEEEEEccccceEEeec---------ccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCc
Q psy14906 506 SFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLS---------GHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576 (583)
Q Consensus 506 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---------~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~ 576 (583)
.+++|+|++.++ +++.|+.|++||++++..+..+. +|...|++++|+||+++|++|+.||.|+|||+++|
T Consensus 260 ~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 260 NALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp EEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred EeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 999999987655 45678999999999887765543 68889999999999999999999999999999998
Q ss_pred c
Q psy14906 577 Q 577 (583)
Q Consensus 577 ~ 577 (583)
+
T Consensus 339 t 339 (340)
T 4aow_A 339 T 339 (340)
T ss_dssp -
T ss_pred C
Confidence 6
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-42 Score=337.66 Aligned_cols=322 Identities=18% Similarity=0.213 Sum_probs=274.8
Q ss_pred eeeeeecccCccE-EEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEE
Q psy14906 102 DIVGTYKGHTSPV-HLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG 180 (583)
Q Consensus 102 ~~~~~~~~h~~~v-~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 180 (583)
.....+.+|...+ .++.+++++|++|+.||+|++||+.+++.+..+. +|...|.+++|+|++ +|++|
T Consensus 112 ~~~~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~-----------~h~~~V~~l~~~~~~-~l~s~ 179 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLS-----------GHDGGVWALKYAHGG-ILVSG 179 (464)
T ss_dssp CEEEEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC-----------CCSSCEEEEEECSTT-EEEEE
T ss_pred cceEEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEe-----------CCCcCEEEEEEcCCC-EEEEE
Confidence 3456788998885 6778899999999999999999999999999987 999999999999988 99999
Q ss_pred ecCCeEEEEEccCCceeEEEeccCCCeEEEEEec--CCCCEEEEEcCCCcEEEEeCCCCeeh------------------
Q psy14906 181 LSNKKIILHNILTDESLMEFIQTWGPVTALSFRT--DGPPMMVSGSNTGHLTVWNLEDRQVE------------------ 240 (583)
Q Consensus 181 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~s~~~dg~i~vwd~~~~~~~------------------ 240 (583)
+.||+|++||+.+++.+..+.+|...|.+++|++ +++ ++++++.||.|++||+.+++..
T Consensus 180 s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (464)
T 3v7d_B 180 STDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIK-YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEE 258 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCE-EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGG
T ss_pred eCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCC-EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCC
Confidence 9999999999999999999999999999999995 556 8999999999999999876533
Q ss_pred -----hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC
Q psy14906 241 -----NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 241 -----~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 315 (583)
..+ .+|...+.++ +++++++++++.|+.|++||+. ..+.+..+.+|...|.+++|+| +++++++++.
T Consensus 259 ~~~~~~~~-~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~----~~~~~~~~~~~~~~v~~~~~~~-~~~~l~sg~~ 330 (464)
T 3v7d_B 259 NPYFVGVL-RGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVA----QMKCLYILSGHTDRIYSTIYDH-ERKRCISASM 330 (464)
T ss_dssp CTTEEEEE-CCCSSCEEEE--EEETTEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEEET-TTTEEEEEET
T ss_pred CeEEEEEc-cCccceEEEE--cCCCCEEEEEeCCCeEEEEECC----CCcEEEEecCCCCCEEEEEEcC-CCCEEEEEeC
Confidence 233 5777888776 6789999999999999999775 5677788888888888888887 7888888888
Q ss_pred CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcc
Q psy14906 316 DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKS 395 (583)
Q Consensus 316 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 395 (583)
||.|++||+.+++.
T Consensus 331 dg~i~vwd~~~~~~------------------------------------------------------------------ 344 (464)
T 3v7d_B 331 DTTIRIWDLENGEL------------------------------------------------------------------ 344 (464)
T ss_dssp TSCEEEEETTTTEE------------------------------------------------------------------
T ss_pred CCcEEEEECCCCcE------------------------------------------------------------------
Confidence 88888888765422
Q ss_pred cccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEE
Q psy14906 396 KMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI 475 (583)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 475 (583)
...+ .+|...|.+++|+ +++|+
T Consensus 345 ---------------------------------------------------~~~~-----~~h~~~v~~~~~~--~~~l~ 366 (464)
T 3v7d_B 345 ---------------------------------------------------MYTL-----QGHTALVGLLRLS--DKFLV 366 (464)
T ss_dssp ---------------------------------------------------EEEE-----CCCSSCEEEEEEC--SSEEE
T ss_pred ---------------------------------------------------EEEE-----eCCCCcEEEEEEc--CCEEE
Confidence 2223 5788899999997 57999
Q ss_pred EeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEe-ecccccceeeEEecC
Q psy14906 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRK-LSGHMGQLTDADFSP 554 (583)
Q Consensus 476 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~h~~~v~~l~~s~ 554 (583)
+++.||.|++||+.+. .......+...+..++|+|+++++++++ ||.|++||+++++.+.. +.+|...|.+++|+
T Consensus 367 s~s~dg~v~vwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~- 442 (464)
T 3v7d_B 367 SAAADGSIRGWDANDY--SRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK- 442 (464)
T ss_dssp EEETTSEEEEEETTTC--CEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-
T ss_pred EEeCCCcEEEEECCCC--ceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-
Confidence 9999999999999987 6777777778899999999999999998 89999999999999876 67889999999997
Q ss_pred CCcEEEEEeCCCeEEEEe
Q psy14906 555 DSRWLITASMDCTIRVWD 572 (583)
Q Consensus 555 d~~~l~s~~~d~~i~vw~ 572 (583)
++.++++++.|+.+.+|-
T Consensus 443 ~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 443 GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp TTEEEEEEEETTEEEEEE
T ss_pred CCEEEEEEEeCCeEEEEE
Confidence 445566667777666554
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=351.93 Aligned_cols=329 Identities=13% Similarity=0.152 Sum_probs=271.0
Q ss_pred cEEEE--ccCCC-EEEEE----------eCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEE
Q psy14906 113 PVHLI--LPFGP-HLISV----------DEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV 179 (583)
Q Consensus 113 ~v~~i--s~~~~-~l~s~----------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 179 (583)
.|.++ +|+++ +|+++ +.|+.|++||+.+++....+.. ..|...|.+++|+|++++|++
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~---------~~~~~~v~~~~~s~~~~~l~~ 84 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS---------LQVDSKFNDLDWSHNNKIIAG 84 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC---------CCCSSCEEEEEECSSSSCEEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE---------EecCCceEEEEECCCCCeEEE
Confidence 44554 89987 89998 8899999999998763211110 067889999999999999999
Q ss_pred EecCCeEEEEEccC----CceeEEEeccCCCeEEEEEecC-CCCEEEEEcCCCcEEEEeCCCCe------ehhhh--hhc
Q psy14906 180 GLSNKKIILHNILT----DESLMEFIQTWGPVTALSFRTD-GPPMMVSGSNTGHLTVWNLEDRQ------VENQI--KKA 246 (583)
Q Consensus 180 ~~~d~~i~iw~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~vwd~~~~~------~~~~~--~~~ 246 (583)
++.||.|++||+.+ .+.+..+.+|...|.+++|+|+ +. +|++++.|+.|++||+.+++ ....+ ...
T Consensus 85 ~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 163 (416)
T 2pm9_A 85 ALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDN-VLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMS 163 (416)
T ss_dssp EESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTT-BEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCC
T ss_pred EccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCC-EEEEEcCCCeEEEEECCCCccccccccccccccccC
Confidence 99999999999987 4588888999999999999999 55 99999999999999999876 22221 157
Q ss_pred cccceEEEEEecC-CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC------CCCCeeEEEeeCCCCEEEEeeCCC--
Q psy14906 247 HRKVVTGAHFLYN-EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH------SAPPNYIQFYGNSSDNILSAAGDS-- 317 (583)
Q Consensus 247 ~~~~v~~~~~~~~-~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~~~~~dg-- 317 (583)
|...|.+++|+|+ +.+|++++.|+.|++||++ ..+.+..+..+ ...+.+++|+|.+..++++++.|+
T Consensus 164 ~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~ 239 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAHVFASAGSSNFASIWDLK----AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND 239 (416)
T ss_dssp SSCCCCEEEECSSCTTEEEEESSSSCEEEEETT----TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS
T ss_pred CCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC----CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCC
Confidence 8999999999999 7899999999999999775 45666676665 788999999984457999999998
Q ss_pred -cEEEEEccccc-cceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcc
Q psy14906 318 -TLRIFNTKSET-SNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKS 395 (583)
Q Consensus 318 -~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 395 (583)
.|++||++++. ....+.
T Consensus 240 ~~i~~~d~~~~~~~~~~~~------------------------------------------------------------- 258 (416)
T 2pm9_A 240 PSILIWDLRNANTPLQTLN------------------------------------------------------------- 258 (416)
T ss_dssp CCCCEEETTSTTSCSBCCC-------------------------------------------------------------
T ss_pred ceEEEEeCCCCCCCcEEee-------------------------------------------------------------
Confidence 99999998753 221110
Q ss_pred cccceeeecccccccCCCCceEEEEcc-CCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCC-cE
Q psy14906 396 KMDDMFLVPERCKQAKQSKPTCVYITH-CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN-QI 473 (583)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~ 473 (583)
..+...+.+++|+| ++++|++++.||.|++||+.+++.+..+ ..|...|.+++|+|++ .+
T Consensus 259 -------------~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~-----~~~~~~v~~~~~s~~~~~~ 320 (416)
T 2pm9_A 259 -------------QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQF-----PARGNWCFKTKFAPEAPDL 320 (416)
T ss_dssp -------------SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEE-----ECSSSCCCCEEECTTCTTE
T ss_pred -------------cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceee-----cCCCCceEEEEECCCCCCE
Confidence 02236799999999 8999999999999999999999998888 7899999999999999 89
Q ss_pred EEEeecCCcEEEEEccCCCCCceEE-------------ee---------------------ccCCeeeEEeccCCcEEEE
Q psy14906 474 VISGGNDQTVKVWHFKQTGKPPLRS-------------IK---------------------LDNGISFFRTHQESSMLAV 519 (583)
Q Consensus 474 l~s~~~dg~i~iwd~~~~~~~~~~~-------------~~---------------------~~~~v~~~~~s~~~~~l~~ 519 (583)
|++++.|+.|++||+.......... +. +..++.+++|+|+|++||+
T Consensus 321 l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~ 400 (416)
T 2pm9_A 321 FACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQI 400 (416)
T ss_dssp EEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECB
T ss_pred EEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEE
Confidence 9999999999999998763211110 00 2356779999999999999
Q ss_pred EeCCceEEEEEcccc
Q psy14906 520 CLDDFTVNIIDIDTC 534 (583)
Q Consensus 520 ~~~dg~i~i~d~~~~ 534 (583)
++.|+.|+||++.+.
T Consensus 401 ~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 401 TPDGKGVSITNPKIS 415 (416)
T ss_dssp CTTSSCBCCBCCCCC
T ss_pred eCCCCeEEEEEeccC
Confidence 999999999998764
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=331.07 Aligned_cols=306 Identities=18% Similarity=0.243 Sum_probs=246.4
Q ss_pred ccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCce-------EEecccCCcceEEEeeCCCCCEEEE
Q psy14906 109 GHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTF-------KIMGKRWNSCVNVLEPSPVVDIIGV 179 (583)
Q Consensus 109 ~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~~~~s~~~~~l~~ 179 (583)
+|...|.++ +|||++||+++ ++.+++|++.+++.+..+....... ......+...|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 699999987 99999999976 7899999999999887775221000 0000122345999999999999999
Q ss_pred EecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEec-
Q psy14906 180 GLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLY- 258 (583)
Q Consensus 180 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~- 258 (583)
|+.|+.|++||+.+++.+..+.+|...|.+++|+|+++ +|++++.|++|++||+++++....+ .+...+.+++|+|
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~v~iwd~~~~~~~~~~--~~~~~v~~~~~~~~ 217 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDLRTGQCSLTL--SIEDGVTTVAVSPG 217 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEECST
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCC-EEEEecCCCcEEEEECCCCeeEEEE--EcCCCcEEEEEECC
Confidence 99999999999999999999999999999999999999 8999999999999999999887776 4677899999999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCceeeEEe-------ccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccce
Q psy14906 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIR-------EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNK 331 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 331 (583)
++++|++++.|+.|++||+. .+..+..+ .+|...|.+++|+| ++++|++++.|+.|++||+.+.....
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~----~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d~~v~~wd~~~~~~~~ 292 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSE----TGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKS 292 (393)
T ss_dssp TCCEEEEEETTSCEEEEETT----TCCEEEEEC------CCCSSCEEEEEECT-TSSEEEEEETTSEEEEEEC-------
T ss_pred CCCEEEEEcCCCcEEEEECC----CCcEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 89999999999999999765 33444444 57899999999997 89999999999999999997654321
Q ss_pred eeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccC
Q psy14906 332 NLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAK 411 (583)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 411 (583)
..... ...... .....|
T Consensus 293 ~~~~~---------------------------------------------~~~~~~------------------~~~~~h 309 (393)
T 1erj_A 293 DSKTP---------------------------------------------NSGTCE------------------VTYIGH 309 (393)
T ss_dssp -----------------------------------------------------CEE------------------EEEECC
T ss_pred cccCC---------------------------------------------CCCcce------------------EEEecc
Confidence 11000 000000 001123
Q ss_pred CCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC------CCcEEEEeecCCcEEE
Q psy14906 412 QSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN------LNQIVISGGNDQTVKV 485 (583)
Q Consensus 412 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~------~~~~l~s~~~dg~i~i 485 (583)
...+.+++++|++++|++|+.||.|++||..+++.+..+ .+|...|.+++|++ ++++|++|+.||+|++
T Consensus 310 ~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l-----~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~i 384 (393)
T 1erj_A 310 KDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML-----QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARI 384 (393)
T ss_dssp SSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEE-----ECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEE
T ss_pred cCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEE-----CCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEE
Confidence 367899999999999999999999999999999988888 79999999999986 6889999999999999
Q ss_pred EEccCC
Q psy14906 486 WHFKQT 491 (583)
Q Consensus 486 wd~~~~ 491 (583)
|++...
T Consensus 385 W~~~~~ 390 (393)
T 1erj_A 385 WKYKKI 390 (393)
T ss_dssp EEEEEC
T ss_pred Cccccc
Confidence 998764
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-42 Score=327.88 Aligned_cols=309 Identities=14% Similarity=0.206 Sum_probs=267.2
Q ss_pred eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy14906 196 SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275 (583)
Q Consensus 196 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w 275 (583)
....+.+|...|++++|+|+++ +|++++.||.|++||+.+++.+..+ .+|...|.+++|+|++++|++++.|+.|++|
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGD-LLFSCSKDSSASVWYSLNGERLGTL-DGHTGTIWSIDVDCFTKYCVTGSADYSIKLW 101 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSC-EEEEEESSSCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred ccEEEEEeeceEEEEEEcCCCC-EEEEEeCCCEEEEEeCCCchhhhhh-hhcCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 3455789999999999999999 8999999999999999999999988 7899999999999999999999999999999
Q ss_pred EccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC-----CcEEEEEccccccceeeccchhhhhhhhhhcchh
Q psy14906 276 IFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD-----STLRIFNTKSETSNKNLGIASANRNNLKRKNRLE 350 (583)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (583)
+++ ..+.+..+. +...+.+++|+| ++.++++++.+ +.|++||+........+.....
T Consensus 102 d~~----~~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~------------ 163 (369)
T 3zwl_B 102 DVS----NGQCVATWK-SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSE------------ 163 (369)
T ss_dssp ETT----TCCEEEEEE-CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECS------------
T ss_pred ECC----CCcEEEEee-cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeeccccc------------
Confidence 775 445666665 788999999997 89999999998 9999999987654433211000
Q ss_pred ccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEE
Q psy14906 351 KMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIG 430 (583)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 430 (583)
.....+. .......+.+++|+|++++++++
T Consensus 164 ---------------------------------~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~~~ 193 (369)
T 3zwl_B 164 ---------------------------------EPIHKII-----------------THEGLDAATVAGWSTKGKYIIAG 193 (369)
T ss_dssp ---------------------------------SCSEEEE-----------------CCTTCCCEEEEEECGGGCEEEEE
T ss_pred ---------------------------------ceeeecc-----------------CCcCccceeEEEEcCCCCEEEEE
Confidence 0000000 00001379999999999999999
Q ss_pred ecCceEEEEEccc-CccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEE
Q psy14906 431 YSSGHVDRFNIQS-GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR 509 (583)
Q Consensus 431 ~~dg~i~i~d~~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~ 509 (583)
+.+|.|++||+.+ ++....+ ..|...|.+++|+|++++|++++.|+.|++||+.+. +.+..+.+...+.+++
T Consensus 194 ~~dg~i~i~d~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~--~~~~~~~~~~~~~~~~ 266 (369)
T 3zwl_B 194 HKDGKISKYDVSNNYEYVDSI-----DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL--QVLKKYETDCPLNTAV 266 (369)
T ss_dssp ETTSEEEEEETTTTTEEEEEE-----ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--CEEEEEECSSCEEEEE
T ss_pred cCCCEEEEEECCCCcEeEEEE-----ecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC--ceeeeecCCCCceeEE
Confidence 9999999999998 6777776 689999999999999999999999999999999998 8888888889999999
Q ss_pred eccCCcEEEEEeCCc--------------eEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCC
Q psy14906 510 THQESSMLAVCLDDF--------------TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575 (583)
Q Consensus 510 ~s~~~~~l~~~~~dg--------------~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~ 575 (583)
|+|+++++++++.++ .+++||+.+++.+..+.+|...|++++|+|++++|++++.||.|++|++++
T Consensus 267 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 267 ITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp ECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred ecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 999999999999988 899999999999999999999999999999999999999999999999998
Q ss_pred cccccc
Q psy14906 576 SQLIDC 581 (583)
Q Consensus 576 ~~~~~~ 581 (583)
+.....
T Consensus 347 ~~~~~~ 352 (369)
T 3zwl_B 347 SYFDFK 352 (369)
T ss_dssp HHHTCC
T ss_pred ccchhH
Confidence 765543
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=333.29 Aligned_cols=329 Identities=22% Similarity=0.330 Sum_probs=284.6
Q ss_pred cEEEeecCCCCCC-eEEEEeeC-eEEEEEcCCeEEEEec-cceeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy14906 63 FKLLSVSPQHEDD-ITCLSSDF-FHIYTSANNIIYAWRR-GIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIK 139 (583)
Q Consensus 63 ~~~~~~~~~h~~~-v~~~~~~~-~~~~~~~~~~i~vw~~-~~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~ 139 (583)
.+....+.+|.+. ++|+++++ .+++++.|+.|++||. .++.+..+.+|...|.++..++++|++++.||+|++||+.
T Consensus 108 ~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 108 LKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp CCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred cceeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECC
Confidence 3445667889886 57899987 5667789999999996 5688889999999999997789999999999999999999
Q ss_pred CCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCE
Q psy14906 140 AEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPM 219 (583)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 219 (583)
+++.+..+. +|...|.+++|+ ++.|++|+.||.|++||+.+++.+..+.+|...|.+++| +++ +
T Consensus 188 ~~~~~~~~~-----------~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~-~ 251 (445)
T 2ovr_B 188 TGECIHTLY-----------GHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGR-R 251 (445)
T ss_dssp TTEEEEEEC-----------CCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSS-C
T ss_pred cCcEEEEEC-----------CCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCC-E
Confidence 999999887 899999999995 678999999999999999999999999999999999999 566 7
Q ss_pred EEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCee
Q psy14906 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNY 299 (583)
Q Consensus 220 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~ 299 (583)
+++++.||.|++||+++++.+..+ .+|...|.++.| ++.++++++.|+.|++||+. .++.+..+.+|...+.+
T Consensus 252 l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~----~~~~~~~~~~~~~~v~~ 324 (445)
T 2ovr_B 252 VVSGAYDFMVKVWDPETETCLHTL-QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE----TGNCIHTLTGHQSLTSG 324 (445)
T ss_dssp EEEEETTSCEEEEEGGGTEEEEEE-CCCSSCEEEEEE--CSSEEEEEETTSCEEEEETT----TCCEEEEECCCCSCEEE
T ss_pred EEEEcCCCEEEEEECCCCcEeEEe-cCCCCceEEEEE--CCCEEEEEeCCCeEEEEECC----CCCEEEEEcCCcccEEE
Confidence 999999999999999999999988 789999999999 88999999999999999775 46778888999999888
Q ss_pred EEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEE
Q psy14906 300 IQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAA 379 (583)
Q Consensus 300 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (583)
+.+. ++++++++.||.|++||+.+++....+...
T Consensus 325 ~~~~---~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~------------------------------------------- 358 (445)
T 2ovr_B 325 MELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGP------------------------------------------- 358 (445)
T ss_dssp EEEE---TTEEEEEETTSCEEEEETTTCCEEEEECST-------------------------------------------
T ss_pred EEEe---CCEEEEEeCCCeEEEEECCCCcEEEEEccC-------------------------------------------
Confidence 8874 569999999999999999887655443110
Q ss_pred EecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcc
Q psy14906 380 IHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHV 459 (583)
Q Consensus 380 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~ 459 (583)
..+...+.+++++ ++++++|+.||.|++||+.+++.+..+.......|.
T Consensus 359 -----------------------------~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 407 (445)
T 2ovr_B 359 -----------------------------NKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSG 407 (445)
T ss_dssp -----------------------------TSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGT
T ss_pred -----------------------------CCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCC
Confidence 0122568888885 689999999999999999999988776322224788
Q ss_pred cCeeEEEEeCCCcEEEEeecCCc----EEEEEccCC
Q psy14906 460 GGVRGVVSDNLNQIVISGGNDQT----VKVWHFKQT 491 (583)
Q Consensus 460 ~~v~~~~~s~~~~~l~s~~~dg~----i~iwd~~~~ 491 (583)
+.|.+++|+|++.++++++.||+ |.+||+...
T Consensus 408 ~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 408 GVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp CEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred ceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 99999999999999999999998 999999764
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=346.78 Aligned_cols=314 Identities=11% Similarity=0.071 Sum_probs=231.7
Q ss_pred CCCCCEEEEEecCCeEEEEEccCCcee----EEEeccCCCeEEEEEecC------CCCEEEEEcCCCcEEEEeCCCCeeh
Q psy14906 171 SPVVDIIGVGLSNKKIILHNILTDESL----MEFIQTWGPVTALSFRTD------GPPMMVSGSNTGHLTVWNLEDRQVE 240 (583)
Q Consensus 171 s~~~~~l~~~~~d~~i~iw~~~~~~~~----~~~~~~~~~v~~~~~~~~------~~~~l~s~~~dg~i~vwd~~~~~~~ 240 (583)
+|+++.+++++.|++|+|||+.+++.. ..+.+|.+.|.+++|+|+ +. +|++++.||+|++||+.+++..
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~-~LAs~s~DgtvrlWd~~~~~~~ 248 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVG-CLSFVSQEGTINFLEIIDNATD 248 (524)
T ss_dssp ------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSC-EEEEEETTSCEEEEECCCCSSS
T ss_pred chhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCc-eEEEEecCCeEEEEEcCCCccc
Confidence 455556666778899999999887653 346677889999999997 35 8999999999999999876422
Q ss_pred -----------hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEE--EeeCCC
Q psy14906 241 -----------NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ--FYGNSS 307 (583)
Q Consensus 241 -----------~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~ 307 (583)
..+ .+|...|++++|++++ .|++|+.||+|++||++.. ......+.+|...|.+++ |+| ++
T Consensus 249 ~~~~~~~~~p~~~l-~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~---~~~~~~~~~H~~~V~sv~~~~s~-~g 322 (524)
T 2j04_B 249 VHVFKMCEKPSLTL-SLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDP---EVPSFYDQVHDSYILSVSTAYSD-FE 322 (524)
T ss_dssp SSEEECCCSCSEEE-CCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBC---SSCSEEEECSSSCEEEEEEECCT-TS
T ss_pred cccceeecCceEEE-EcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCC---CCceEEeecccccEEEEEEEcCC-CC
Confidence 244 6789999999999864 8999999999999977532 234456789999999994 454 66
Q ss_pred -CEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCce
Q psy14906 308 -DNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNK 386 (583)
Q Consensus 308 -~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (583)
.+|++++.|++|++||++++++...+...
T Consensus 323 ~~~laS~S~D~tvklWD~~~~~~~~~~~~~-------------------------------------------------- 352 (524)
T 2j04_B 323 DTVVSTVAVDGYFYIFNPKDIATTKTTVSR-------------------------------------------------- 352 (524)
T ss_dssp CCEEEEEETTSEEEEECGGGHHHHCEEEEE--------------------------------------------------
T ss_pred CeEEEEeccCCeEEEEECCCCCcccccccc--------------------------------------------------
Confidence 89999999999999999876554322000
Q ss_pred EEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEE
Q psy14906 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVV 466 (583)
Q Consensus 387 i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 466 (583)
.....+.+++|+|+++.+++++.|+.|++||++++.....+ .+|.+.|++++
T Consensus 353 -----------------------~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l-----~gH~~~V~sva 404 (524)
T 2j04_B 353 -----------------------FRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPL-----VSRETTITAIG 404 (524)
T ss_dssp -----------------------CSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEE-----EECSSCEEEEE
T ss_pred -----------------------cccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceee-----ecCCCceEEEE
Confidence 00024778999999999999999999999999998887777 68999999999
Q ss_pred EeCCCcEEEEeecCCcEEEEEccCCCCCceEEee------ccCCeeeEEeccCCcEEEEEeCCceEEEEEcc-ccceEEe
Q psy14906 467 SDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK------LDNGISFFRTHQESSMLAVCLDDFTVNIIDID-TCTIIRK 539 (583)
Q Consensus 467 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~ 539 (583)
|+|++++|++|+.||+|++||+... .+.... ....+.+++|+|+++.+.. .. .+.+|+.. ++..+..
T Consensus 405 ~Sp~g~~l~Sgs~Dgtv~lwd~~~~---~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~-~~--~~~~~~~~~~g~~~~~ 478 (524)
T 2j04_B 405 VSRLHPMVLAGSADGSLIITNAARR---LLHGIKNSSATQKSLRLWKWDYSIKDDKYRI-DS--SYEVYPLTVNDVSKAK 478 (524)
T ss_dssp CCSSCCBCEEEETTTEEECCBSCSS---TTTCC------CCCCEEEECBCCSSSCEEEE-CC--CCCCCC----------
T ss_pred eCCCCCeEEEEECCCEEEEEechHh---hccccccCccceeeeEEEEeccCCCCCeEEc-cC--CceecccccCCcceee
Confidence 9999999999999999999998654 222211 1124678999999985532 22 23444443 5677888
Q ss_pred ecccccceeeEEecCCCc---EEEEEeCCCeEEEEeCCC
Q psy14906 540 LSGHMGQLTDADFSPDSR---WLITASMDCTIRVWDIPS 575 (583)
Q Consensus 540 ~~~h~~~v~~l~~s~d~~---~l~s~~~d~~i~vw~~~~ 575 (583)
+.+|...|.+|+|+|+++ +||+|+.||.|+||++.-
T Consensus 479 l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 479 IDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp ---CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred ecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 999999999999999964 999999999999999863
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=330.54 Aligned_cols=339 Identities=12% Similarity=0.098 Sum_probs=275.7
Q ss_pred EEEe--eC-eEEEEEcCCeEEEEecc-ceeeeeecccCccEEE-EccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCC
Q psy14906 78 CLSS--DF-FHIYTSANNIIYAWRRG-IDIVGTYKGHTSPVHL-ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDND 152 (583)
Q Consensus 78 ~~~~--~~-~~~~~~~~~~i~vw~~~-~~~~~~~~~h~~~v~~-is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 152 (583)
+++| ++ .+++++.|+.|++||.. ++....+..|...... +++++++|++++.||.|++||+.+++....+.
T Consensus 61 ~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---- 136 (420)
T 3vl1_A 61 GNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ---- 136 (420)
T ss_dssp TCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT----
T ss_pred ceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc----
Confidence 4454 44 68888899999999975 4555556666322222 38999999999999999999999998887776
Q ss_pred ceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEE
Q psy14906 153 TFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVW 232 (583)
Q Consensus 153 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw 232 (583)
.|...|.+++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|+++ +|++++.|+.|++|
T Consensus 137 -------~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iw 208 (420)
T 3vl1_A 137 -------AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGR-NVLSASLDGTIRLW 208 (420)
T ss_dssp -------SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTT-EEEEEETTSCEEEE
T ss_pred -------cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEe
Confidence 8999999999999999999999999999999999999999999999999999999998 89999999999999
Q ss_pred eCCCCeehhhhh--hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEE
Q psy14906 233 NLEDRQVENQIK--KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNI 310 (583)
Q Consensus 233 d~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 310 (583)
|+++++.+..+. ..|...+.+++|.+++... ....+...+.+++|+| ++++|
T Consensus 209 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-------------------------~~~~~~~~v~~~~~s~-~~~~l 262 (420)
T 3vl1_A 209 ECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQ-------------------------LHEISTSKKNNLEFGT-YGKYV 262 (420)
T ss_dssp ETTTTEEEEEECBTTBTTCCEEEEEEEECCCSS-------------------------CGGGCCCCCCTTCSSC-TTEEE
T ss_pred ECCCCceeEEeecCCCCCCCccEEEEecCCcce-------------------------eeecccCcccceEEcC-CCCEE
Confidence 999998887772 1466788888887764322 1223566788999997 89999
Q ss_pred EEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEe
Q psy14906 311 LSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLW 390 (583)
Q Consensus 311 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 390 (583)
++++.||.|++||+.+++....+.
T Consensus 263 ~~~~~dg~i~i~d~~~~~~~~~~~-------------------------------------------------------- 286 (420)
T 3vl1_A 263 IAGHVSGVITVHNVFSKEQTIQLP-------------------------------------------------------- 286 (420)
T ss_dssp EEEETTSCEEEEETTTCCEEEEEC--------------------------------------------------------
T ss_pred EEEcCCCeEEEEECCCCceeEEcc--------------------------------------------------------
Confidence 999999999999998765433221
Q ss_pred ecCcccccceeeecccccccCCCCceEEEEccCCc-EEEEEecCceEEEEEcccCcc-ccccCCCCCCCcccCeeEEEEe
Q psy14906 391 SFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGN-FVLIGYSSGHVDRFNIQSGAH-RGSYGHDNQPGHVGGVRGVVSD 468 (583)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~h~~~v~~~~~s 468 (583)
..+...+.+++|+|+++ ++++|+.||.|++||+.+++. ...+. ..|...|.++.+
T Consensus 287 ------------------~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~----~~~~~~v~~~~~- 343 (420)
T 3vl1_A 287 ------------------SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFL----INEGTPINNVYF- 343 (420)
T ss_dssp ------------------CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE----ESTTSCEEEEEE-
T ss_pred ------------------cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhh----ccCCCCceEEEe-
Confidence 11225799999999998 999999999999999998754 45552 236778888855
Q ss_pred CCCcEEEEeecCCcEEEEEccCCCC--------CceEEeeccCCeeeEEeccCCc---EEEEEeCCceEEEEEccc
Q psy14906 469 NLNQIVISGGNDQTVKVWHFKQTGK--------PPLRSIKLDNGISFFRTHQESS---MLAVCLDDFTVNIIDIDT 533 (583)
Q Consensus 469 ~~~~~l~s~~~dg~i~iwd~~~~~~--------~~~~~~~~~~~v~~~~~s~~~~---~l~~~~~dg~i~i~d~~~ 533 (583)
+++++|++++.|+.|++|++..... .......+...+.+++|+|+++ .+++++.+|.+.+|+++.
T Consensus 344 ~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 344 AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 5788999999999999999987421 2223344567899999999999 778888899999999864
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-41 Score=314.92 Aligned_cols=296 Identities=17% Similarity=0.240 Sum_probs=251.2
Q ss_pred eeeeeecccCccEEEE--ccC-CCEEEEEeCCCcEEEEEcCCCc-----EEEEeeccCCceEEecccCCcceEEEeeCCC
Q psy14906 102 DIVGTYKGHTSPVHLI--LPF-GPHLISVDEESNVKVWDIKAEE-----TYLELSFDNDTFKIMGKRWNSCVNVLEPSPV 173 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i--s~~-~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 173 (583)
.+..+|+||++.|+++ +|+ +++||||+.|++|+|||+.+++ +...+. +|...|.+++|+|+
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~-----------~h~~~V~~~~~s~d 97 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR-----------GHSHFVSDVVISSD 97 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEEC-----------CCSSCEEEEEECTT
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEe-----------CCCCCEEEEEECCC
Confidence 4566899999999998 887 6899999999999999998754 344555 89999999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEE
Q psy14906 174 VDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTG 253 (583)
Q Consensus 174 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~ 253 (583)
+++|++++.|+.|++|+............+...+..+.++++++ +|++++.|+.+++||............+|...+..
T Consensus 98 g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~ 176 (340)
T 4aow_A 98 GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSC 176 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEE
T ss_pred CCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCc-cceeecCCCeEEEEEeCCCceEEEEeccccCcccc
Confidence 99999999999999999999998888888889999999999998 89999999999999998765544443789999999
Q ss_pred EEEecCC--CEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccce
Q psy14906 254 AHFLYNE--PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNK 331 (583)
Q Consensus 254 ~~~~~~~--~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 331 (583)
++|++++ .++++++.|+.|++|++. ..+....+.+|...|.+++|+| ++++|++++.||.|++||+.+.+...
T Consensus 177 ~~~~~~~~~~~~~s~~~d~~i~i~d~~----~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~Dg~i~iwd~~~~~~~~ 251 (340)
T 4aow_A 177 VRFSPNSSNPIIVSCGWDKLVKVWNLA----NCKLKTNHIGHTGYLNTVTVSP-DGSLCASGGKDGQAMLWDLNEGKHLY 251 (340)
T ss_dssp EEECSCSSSCEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEE
T ss_pred eEEccCCCCcEEEEEcCCCEEEEEECC----CCceeeEecCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEEeccCceee
Confidence 9998875 578899999999999765 5678888999999999999997 89999999999999999998765543
Q ss_pred eeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccC
Q psy14906 332 NLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAK 411 (583)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 411 (583)
.+..
T Consensus 252 ~~~~---------------------------------------------------------------------------- 255 (340)
T 4aow_A 252 TLDG---------------------------------------------------------------------------- 255 (340)
T ss_dssp EEEC----------------------------------------------------------------------------
T ss_pred eecC----------------------------------------------------------------------------
Confidence 3211
Q ss_pred CCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCC----CCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE
Q psy14906 412 QSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHD----NQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487 (583)
Q Consensus 412 ~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 487 (583)
...+.+++++|++.++ +++.|+.|++||++++.....+... ...+|...|++++|+|++++|++|+.||.|+|||
T Consensus 256 ~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 256 GDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ 334 (340)
T ss_dssp SSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 1468899999988655 4557899999999987766554321 1247899999999999999999999999999999
Q ss_pred ccCC
Q psy14906 488 FKQT 491 (583)
Q Consensus 488 ~~~~ 491 (583)
++++
T Consensus 335 ~~tG 338 (340)
T 4aow_A 335 VTIG 338 (340)
T ss_dssp EEC-
T ss_pred CCCc
Confidence 9987
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-42 Score=336.98 Aligned_cols=352 Identities=11% Similarity=0.162 Sum_probs=269.8
Q ss_pred EEeccceeeeee-cccCccEEEE--cc-CCCEEEEEeCCCcEEEEEcCC---CcE---EEEeeccCCceEEecccCCcce
Q psy14906 96 AWRRGIDIVGTY-KGHTSPVHLI--LP-FGPHLISVDEESNVKVWDIKA---EET---YLELSFDNDTFKIMGKRWNSCV 165 (583)
Q Consensus 96 vw~~~~~~~~~~-~~h~~~v~~i--s~-~~~~l~s~~~dg~i~iwd~~~---~~~---~~~~~~~~~~~~~~~~~~~~~i 165 (583)
.|+..++.+..+ ++|.+.|+++ +| ++++||+|+.||+|++||+.+ +.. ...+ .|...|
T Consensus 47 ~w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~------------~h~~~v 114 (437)
T 3gre_A 47 MGNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY------------DCSSTV 114 (437)
T ss_dssp GGGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE------------ECSSCE
T ss_pred cccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec------------cCCCCE
Confidence 488888888888 8999999997 89 999999999999999999887 431 2222 678999
Q ss_pred EEEeeCCCCCEEEEEecCCeEEEEEcc---CCceeEEEec------------cCCCeEEEE--EecCCCCEEEEEcCCCc
Q psy14906 166 NVLEPSPVVDIIGVGLSNKKIILHNIL---TDESLMEFIQ------------TWGPVTALS--FRTDGPPMMVSGSNTGH 228 (583)
Q Consensus 166 ~~~~~s~~~~~l~~~~~d~~i~iw~~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~~l~s~~~dg~ 228 (583)
.+++|+|++++|++++.||.|++||+. +++.+..+.. +...+.++. +++++. +|++++.|+.
T Consensus 115 ~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~ 193 (437)
T 3gre_A 115 TQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSR 193 (437)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSE
T ss_pred EEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCe
Confidence 999999999999999999999999994 5655544432 345566666 456787 8999999999
Q ss_pred EEEEeCCCCeehhhhhhc--cccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEec-cCCCCCeeEEEee-
Q psy14906 229 LTVWNLEDRQVENQIKKA--HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE-GHSAPPNYIQFYG- 304 (583)
Q Consensus 229 i~vwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~- 304 (583)
|++||+++++.+..+ .+ |...|++++|+|++++|++++.||.|++||+. ..+.+..+. .|..+|.+++|+|
T Consensus 194 i~iwd~~~~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~~~~~~v~~~~~~~~ 268 (437)
T 3gre_A 194 VIIFDIRTLERLQII-ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIR----FNVLIRSWSFGDHAPITHVEVCQF 268 (437)
T ss_dssp EEEEETTTCCEEEEE-ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETT----TTEEEEEEBCTTCEEEEEEEECTT
T ss_pred EEEEeCCCCeeeEEE-ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcC----CccEEEEEecCCCCceEEEEeccc
Confidence 999999999998888 56 89999999999999999999999999999775 466777765 7778999997775
Q ss_pred --CCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEec
Q psy14906 305 --NSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHT 382 (583)
Q Consensus 305 --~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (583)
+++.+|++++.||.|++||+.+++....+...
T Consensus 269 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---------------------------------------------- 302 (437)
T 3gre_A 269 YGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINS---------------------------------------------- 302 (437)
T ss_dssp TCTTEEEEEEESTTEEEEEEETTTTEEEEEEESS----------------------------------------------
T ss_pred cCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcC----------------------------------------------
Confidence 26779999999999999999887765443110
Q ss_pred CCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCe
Q psy14906 383 GKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGV 462 (583)
Q Consensus 383 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v 462 (583)
...+..+.|+|+++.+ .+. .+.. ..|...|
T Consensus 303 -----------------------------~~~~~~~~~~~~~~~l----~~~--------------~~~~---~~~~~~v 332 (437)
T 3gre_A 303 -----------------------------DEQPSMEHFLPIEKGL----EEL--------------NFCG---IRSLNAL 332 (437)
T ss_dssp -----------------------------SSCCCGGGGSCBCSSG----GGC--------------CCCC---CCSGGGG
T ss_pred -----------------------------CCCCccceeccccccc----ccc--------------eecc---cccCCce
Confidence 1234445566655443 010 1100 2499999
Q ss_pred eEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc----CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEE
Q psy14906 463 RGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD----NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIR 538 (583)
Q Consensus 463 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~ 538 (583)
++++|+ ++++|++++.|+.|++||+.++ +....+..+ ..+....++++..+++.. |+........
T Consensus 333 ~~l~~~-~~~~l~s~~~d~~i~~wd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 401 (437)
T 3gre_A 333 STISVS-NDKILLTDEATSSIVMFSLNEL--SSSKAVISPSRFSDVFIPTQVTANLTMLLRK--------MKRTSTHSVD 401 (437)
T ss_dssp CCEEEE-TTEEEEEEGGGTEEEEEETTCG--GGCEEEECC--CCCEEEEEEEETTEEEEEEE--------CC--------
T ss_pred EEEEEC-CceEEEecCCCCeEEEEECCCc--ccceEEecccccCceEEEEEeecceEEEEEe--------cccccccccC
Confidence 999999 7899999999999999999988 777766543 245566666666655544 3333444455
Q ss_pred eecccccceeeEEecCC--CcEEEEEeCCCeEEEEe
Q psy14906 539 KLSGHMGQLTDADFSPD--SRWLITASMDCTIRVWD 572 (583)
Q Consensus 539 ~~~~h~~~v~~l~~s~d--~~~l~s~~~d~~i~vw~ 572 (583)
....|...|++++|+++ +.+|++++.||.|+||+
T Consensus 402 ~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 402 DSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp -----CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 66779999999999998 88999999999999995
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-41 Score=348.67 Aligned_cols=292 Identities=22% Similarity=0.313 Sum_probs=249.9
Q ss_pred eEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC-----eehhhhhhccccceEEEEEecCCCEEEEEeCCCe
Q psy14906 197 LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR-----QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271 (583)
Q Consensus 197 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 271 (583)
...+.+|.+.|++++|+|++..+|++|+.|++|++||+.+. .....+ .+|...|.+++|+|++++|++++.|+.
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~-~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRL-TGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccccccccee-cCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 34678999999999999987559999999999999999764 234455 789999999999999999999999999
Q ss_pred EEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhc
Q psy14906 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEK 351 (583)
Q Consensus 272 i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (583)
|++||+. .+.....+.+|...|.+++|+| ++++|++++.|++|++||..........
T Consensus 454 v~vwd~~----~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~------------------ 510 (694)
T 3dm0_A 454 LRLWDLA----AGVSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTIS------------------ 510 (694)
T ss_dssp EEEEETT----TTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEEC------------------
T ss_pred EEEEECC----CCcceeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeec------------------
Confidence 9999775 5677888999999999999997 8999999999999999997543211100
Q ss_pred cccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCC--cEEEE
Q psy14906 352 MNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCG--NFVLI 429 (583)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~--~~l~~ 429 (583)
.....|...+.+++|+|++ ..+++
T Consensus 511 ------------------------------------------------------~~~~~h~~~v~~~~~~~~~~~~~l~s 536 (694)
T 3dm0_A 511 ------------------------------------------------------EGGEGHRDWVSCVRFSPNTLQPTIVS 536 (694)
T ss_dssp ------------------------------------------------------SSTTSCSSCEEEEEECSCSSSCEEEE
T ss_pred ------------------------------------------------------cCCCCCCCcEEEEEEeCCCCcceEEE
Confidence 0011233679999999987 68999
Q ss_pred EecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEE
Q psy14906 430 GYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFR 509 (583)
Q Consensus 430 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~ 509 (583)
++.|+.|++||+.+++....+ .+|.+.|++++|+|++++|++++.||.|++||+.++ +.+..+..+..+.+++
T Consensus 537 ~s~d~~v~vwd~~~~~~~~~~-----~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~--~~~~~~~~~~~v~~~~ 609 (694)
T 3dm0_A 537 ASWDKTVKVWNLSNCKLRSTL-----AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG--KKLYSLEANSVIHALC 609 (694)
T ss_dssp EETTSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT--EEEECCBCSSCEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEE-----cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--ceEEEecCCCcEEEEE
Confidence 999999999999999888888 799999999999999999999999999999999988 7888888888999999
Q ss_pred eccCCcEEEEEeCCceEEEEEccccceEEeecccc-------------------cceeeEEecCCCcEEEEEeCCCeEEE
Q psy14906 510 THQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM-------------------GQLTDADFSPDSRWLITASMDCTIRV 570 (583)
Q Consensus 510 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~-------------------~~v~~l~~s~d~~~l~s~~~d~~i~v 570 (583)
|+|++.+|+++.. +.|++||+++++.+..+..+. -.+++++|+|||++|++|+.||+|++
T Consensus 610 ~sp~~~~l~~~~~-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~i 688 (694)
T 3dm0_A 610 FSPNRYWLCAATE-HGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRV 688 (694)
T ss_dssp ECSSSSEEEEEET-TEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EcCCCcEEEEEcC-CCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEE
Confidence 9999998887765 569999999998887665332 13788999999999999999999999
Q ss_pred EeCC
Q psy14906 571 WDIP 574 (583)
Q Consensus 571 w~~~ 574 (583)
|++.
T Consensus 689 W~i~ 692 (694)
T 3dm0_A 689 WGIG 692 (694)
T ss_dssp EEC-
T ss_pred Eecc
Confidence 9985
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-40 Score=323.22 Aligned_cols=320 Identities=18% Similarity=0.266 Sum_probs=272.4
Q ss_pred EEEeecCCCCCCe-EEEEeeC-eEEEEEcCCeEEEEec-cceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEc
Q psy14906 64 KLLSVSPQHEDDI-TCLSSDF-FHIYTSANNIIYAWRR-GIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDI 138 (583)
Q Consensus 64 ~~~~~~~~h~~~v-~~~~~~~-~~~~~~~~~~i~vw~~-~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~ 138 (583)
.....+.+|...+ .|+++++ .+++++.|+.|++||. .++.+..+.+|.+.|.++ ++++ +|++++.||+|++||+
T Consensus 112 ~~~~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~ 190 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDI 190 (464)
T ss_dssp CEEEEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEET
T ss_pred cceEEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEEC
Confidence 3455678898874 7888877 5677789999999996 578889999999999998 6666 9999999999999999
Q ss_pred CCCcEEEEeeccCCceEEecccCCcceEEEeeC--CCCCEEEEEecCCeEEEEEccCCce--------------------
Q psy14906 139 KAEETYLELSFDNDTFKIMGKRWNSCVNVLEPS--PVVDIIGVGLSNKKIILHNILTDES-------------------- 196 (583)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s--~~~~~l~~~~~d~~i~iw~~~~~~~-------------------- 196 (583)
.+++.+..+. +|...|.+++|+ +++++|++|+.|+.|++||+.+++.
T Consensus 191 ~~~~~~~~~~-----------~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (464)
T 3v7d_B 191 KKGCCTHVFE-----------GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEEN 259 (464)
T ss_dssp TTTEEEEEEC-----------CCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGC
T ss_pred CCCcEEEEEC-----------CCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCC
Confidence 9999998887 899999999998 5789999999999999999987653
Q ss_pred ---eEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEE
Q psy14906 197 ---LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLK 273 (583)
Q Consensus 197 ---~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~ 273 (583)
+..+.+|...+.++ +++++ ++++++.||.|++||+.+++.+..+ .+|...|.+++|+|+++++++++.|+.|+
T Consensus 260 ~~~~~~~~~~~~~v~~~--~~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~sg~~dg~i~ 335 (464)
T 3v7d_B 260 PYFVGVLRGHMASVRTV--SGHGN-IVVSGSYDNTLIVWDVAQMKCLYIL-SGHTDRIYSTIYDHERKRCISASMDTTIR 335 (464)
T ss_dssp TTEEEEECCCSSCEEEE--EEETT-EEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred eEEEEEccCccceEEEE--cCCCC-EEEEEeCCCeEEEEECCCCcEEEEe-cCCCCCEEEEEEcCCCCEEEEEeCCCcEE
Confidence 45667888888877 56677 8999999999999999999999988 78999999999999999999999999999
Q ss_pred EEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 274 LWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 274 ~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
+||++ .++.+..+.+|...|.++.|+ +.+|++++.||.|++||+.++.......
T Consensus 336 vwd~~----~~~~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~v~vwd~~~~~~~~~~~------------------- 389 (464)
T 3v7d_B 336 IWDLE----NGELMYTLQGHTALVGLLRLS---DKFLVSAAADGSIRGWDANDYSRKFSYH------------------- 389 (464)
T ss_dssp EEETT----TTEEEEEECCCSSCEEEEEEC---SSEEEEEETTSEEEEEETTTCCEEEEEE-------------------
T ss_pred EEECC----CCcEEEEEeCCCCcEEEEEEc---CCEEEEEeCCCcEEEEECCCCceeeeec-------------------
Confidence 99775 567888999999999999995 5799999999999999998754322110
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 433 (583)
+...+..++++|+++++++|+ |
T Consensus 390 ---------------------------------------------------------~~~~~~~~~~~~~~~~l~~~~-d 411 (464)
T 3v7d_B 390 ---------------------------------------------------------HTNLSAITTFYVSDNILVSGS-E 411 (464)
T ss_dssp ---------------------------------------------------------CTTCCCEEEEEECSSEEEEEE-T
T ss_pred ---------------------------------------------------------CCCCccEEEEEeCCCEEEEec-C
Confidence 114577889999999999998 8
Q ss_pred ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEc
Q psy14906 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF 488 (583)
Q Consensus 434 g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 488 (583)
|.|++||+.+++.+..+. ..|...|.+++|+ +..++++++.||.+.+|-+
T Consensus 412 g~i~iwd~~~g~~~~~~~----~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 412 NQFNIYNLRSGKLVHANI----LKDADQIWSVNFK-GKTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp TEEEEEETTTCCEEESCT----TTTCSEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred CeEEEEECCCCcEEehhh----ccCCCcEEEEEec-CCEEEEEEEeCCeEEEEEe
Confidence 999999999999887632 5789999999997 4556666777776665543
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-41 Score=324.59 Aligned_cols=305 Identities=13% Similarity=0.109 Sum_probs=253.0
Q ss_pred eEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe------ehhhhhhccccceEEEEEecC----C---CEE
Q psy14906 197 LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ------VENQIKKAHRKVVTGAHFLYN----E---PLL 263 (583)
Q Consensus 197 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~------~~~~~~~~~~~~v~~~~~~~~----~---~~l 263 (583)
...+.+|.+.|++++|+| + +|++++.||.|++||+.+++ .+..+ .+|...|.+++|+|+ + ++|
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--S-FTVSCSGDGYLKVWDNKLLDNENPKDKSYSH-FVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEESSCSSSCEEEEEECS--S-EEEEEETTSEEEEEESBCCTTCCGGGGEEEE-ECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--C-eEEEEcCCCEEEEEECCCcccccCCCcceEE-ecCCCcEEEEEEecccccCCccccEE
Confidence 455678999999999999 4 89999999999999999887 56666 689999999999999 9 999
Q ss_pred EEEeCCCeEEEEEccCCCCC-ceeeEEeccC-----CCCCeeEEEe----eCCCCE-EEEeeCCCcEEEEEccc------
Q psy14906 264 VTSSPDNTLKLWIFDKADGN-GRLLRIREGH-----SAPPNYIQFY----GNSSDN-ILSAAGDSTLRIFNTKS------ 326 (583)
Q Consensus 264 ~s~~~d~~i~~w~~~~~~~~-~~~~~~~~~~-----~~~v~~~~~~----~~~~~~-l~~~~~dg~i~iwd~~~------ 326 (583)
++++.|+.|++|+++..... ...+..+..| ...|.+++|+ | ++.+ |++++.||.|++||+.+
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999999988643211 1126777888 5899999999 8 7888 99999999999999987
Q ss_pred cccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccc
Q psy14906 327 ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPER 406 (583)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 406 (583)
++..... +...+. ....
T Consensus 164 ~~~~~~~--------------------------~~~~~~-------------------------------------~~~~ 180 (397)
T 1sq9_A 164 SLTLNWS--------------------------PTLELQ-------------------------------------GTVE 180 (397)
T ss_dssp HTTTCCC--------------------------CEEEEE-------------------------------------EEEC
T ss_pred cceeecc--------------------------Ccceee-------------------------------------eeec
Confidence 3332200 000000 0000
Q ss_pred ccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCC---c---ccCeeEEEEeCCCcEEEEeecC
Q psy14906 407 CKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPG---H---VGGVRGVVSDNLNQIVISGGND 480 (583)
Q Consensus 407 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~---h---~~~v~~~~~s~~~~~l~s~~~d 480 (583)
....+...+.+++|+|++ ++++++.||.|++||+.+++....+ .. | ...|.+++|+|++++|++++.|
T Consensus 181 ~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d 254 (397)
T 1sq9_A 181 SPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNF-----ESQHSMINNSNSIRSVKFSPQGSLLAIAHDS 254 (397)
T ss_dssp CSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEE-----ECCC---CCCCCEEEEEECSSTTEEEEEEEE
T ss_pred cccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEE-----eccccccccCCccceEEECCCCCEEEEEecC
Confidence 111233679999999999 9999999999999999999888887 55 8 9999999999999999999999
Q ss_pred ---CcEEEEEccCCCCCceEEee--------------ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeec--
Q psy14906 481 ---QTVKVWHFKQTGKPPLRSIK--------------LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLS-- 541 (583)
Q Consensus 481 ---g~i~iwd~~~~~~~~~~~~~--------------~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-- 541 (583)
+.|++||+.+. +.+..+. +...|.+++|+|++++|++++.||.|++||+.+++.+..+.
T Consensus 255 ~~~g~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 332 (397)
T 1sq9_A 255 NSFGCITLYETEFG--ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMH 332 (397)
T ss_dssp TTEEEEEEEETTTC--CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCCceEEEEECCCC--cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecc
Confidence 99999999988 7777776 56789999999999999999999999999999999999998
Q ss_pred ----cc---------------ccceeeEEecCCC----------cEEEEEeCCCeEEEEeCCCcc
Q psy14906 542 ----GH---------------MGQLTDADFSPDS----------RWLITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 542 ----~h---------------~~~v~~l~~s~d~----------~~l~s~~~d~~i~vw~~~~~~ 577 (583)
+| ...|++++|+|++ ++|++++.||.|++|++++|+
T Consensus 333 ~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 333 CDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp GGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred cCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 88 9999999999998 799999999999999998874
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=304.09 Aligned_cols=284 Identities=15% Similarity=0.170 Sum_probs=248.8
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC--
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR-- 237 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~-- 237 (583)
+|...|.+++| |++++|++++.||.|++||+.+++....+..|...|.+++|+|+++ ++++++.||.+++|++...
T Consensus 16 ~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~ 93 (313)
T 3odt_A 16 GHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKE-LLLFGGKDTMINGVPLFATSG 93 (313)
T ss_dssp CCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTT-EEEEEETTSCEEEEETTCCTT
T ss_pred CCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCC-EEEEecCCCeEEEEEeeecCC
Confidence 99999999999 9999999999999999999999999999999999999999999999 9999999999999998764
Q ss_pred -eehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC
Q psy14906 238 -QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD 316 (583)
Q Consensus 238 -~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 316 (583)
+....+ .+|...|.+++| +++++++++.|+.+++|+ .......+..|...+.++.|.|.+++.+++++.|
T Consensus 94 ~~~~~~~-~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 164 (313)
T 3odt_A 94 EDPLYTL-IGHQGNVCSLSF--QDGVVISGSWDKTAKVWK------EGSLVYNLQAHNASVWDAKVVSFSENKFLTASAD 164 (313)
T ss_dssp SCC-CEE-CCCSSCEEEEEE--ETTEEEEEETTSEEEEEE------TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETT
T ss_pred CCcccch-hhcccCEEEEEe--cCCEEEEEeCCCCEEEEc------CCcEEEecccCCCceeEEEEccCCCCEEEEEECC
Confidence 456666 789999999999 577999999999999996 3566777888999999999998788999999999
Q ss_pred CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccc
Q psy14906 317 STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSK 396 (583)
Q Consensus 317 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 396 (583)
|.|++||....
T Consensus 165 ~~i~i~d~~~~--------------------------------------------------------------------- 175 (313)
T 3odt_A 165 KTIKLWQNDKV--------------------------------------------------------------------- 175 (313)
T ss_dssp SCEEEEETTEE---------------------------------------------------------------------
T ss_pred CCEEEEecCce---------------------------------------------------------------------
Confidence 99999983210
Q ss_pred ccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEE
Q psy14906 397 MDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476 (583)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 476 (583)
+ ..+. ..|...+.+++|+|++. +++
T Consensus 176 ---------------------------------------~-----------~~~~----~~~~~~i~~~~~~~~~~-~~~ 200 (313)
T 3odt_A 176 ---------------------------------------I-----------KTFS----GIHNDVVRHLAVVDDGH-FIS 200 (313)
T ss_dssp ---------------------------------------E-----------EEEC----SSCSSCEEEEEEEETTE-EEE
T ss_pred ---------------------------------------E-----------EEEe----ccCcccEEEEEEcCCCe-EEE
Confidence 0 0010 23788899999999998 899
Q ss_pred eecCCcEEEEEccCCCCCceEEee-ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCC
Q psy14906 477 GGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPD 555 (583)
Q Consensus 477 ~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d 555 (583)
++.||.|++||+.++ +++..+. +...+.+++|+|++ .|++++.||.|++||+.+++.+..+..|...|.+++|+|+
T Consensus 201 ~~~dg~i~i~d~~~~--~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~ 277 (313)
T 3odt_A 201 CSNDGLIKLVDMHTG--DVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSN 277 (313)
T ss_dssp EETTSEEEEEETTTC--CEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTT
T ss_pred ccCCCeEEEEECCch--hhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccC
Confidence 999999999999988 7777776 55789999999999 6899999999999999999999999999999999999999
Q ss_pred CcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 556 SRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 556 ~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
++ +++++.|+.|++|++++++.+...
T Consensus 278 ~~-~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 278 GD-IIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp SC-EEEEETTSCEEEEESCGGGCCC--
T ss_pred CC-EEEEeCCCcEEEEeCCCCceeehh
Confidence 98 667899999999999998876543
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-40 Score=314.74 Aligned_cols=290 Identities=16% Similarity=0.238 Sum_probs=258.2
Q ss_pred eeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEE
Q psy14906 103 IVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG 180 (583)
Q Consensus 103 ~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 180 (583)
....+.+|...|+++ +|++++|++++.||.|++||+.+++.+..+. .|...|.+++|+|++++|+++
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-----------~h~~~v~~~~~~~~~~~l~s~ 92 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLD-----------GHTGTIWSIDVDCFTKYCVTG 92 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEEC-----------CCSSCEEEEEECTTSSEEEEE
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhh-----------hcCCcEEEEEEcCCCCEEEEE
Confidence 455688999999997 9999999999999999999999999999987 899999999999999999999
Q ss_pred ecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCC-----CcEEEEeCCCCeeh-----------hhhh
Q psy14906 181 LSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT-----GHLTVWNLEDRQVE-----------NQIK 244 (583)
Q Consensus 181 ~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~-----------~~~~ 244 (583)
+.||.|++||+.+++.+..+. +...+.+++|+|+++ ++++++.+ +.|++||+..+... ..+
T Consensus 93 ~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~- 169 (369)
T 3zwl_B 93 SADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGN-YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI- 169 (369)
T ss_dssp ETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSS-EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE-
T ss_pred eCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCC-EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec-
Confidence 999999999999999999888 668999999999999 88888888 99999999765432 222
Q ss_pred hcccc--ceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEE
Q psy14906 245 KAHRK--VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322 (583)
Q Consensus 245 ~~~~~--~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 322 (583)
..|.. .+.+++|+|++++|++++.|+.|++||+.. ....+..+..|...|.+++|+| ++.+|++++.|+.|++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~v~ 245 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSN---NYEYVDSIDLHEKSISDMQFSP-DLTYFITSSRDTNSFLV 245 (369)
T ss_dssp ECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTT---TTEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEE
T ss_pred cCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCC---CcEeEEEEecCCCceeEEEECC-CCCEEEEecCCceEEEE
Confidence 34444 899999999999999999999999997752 2577888889999999999997 89999999999999999
Q ss_pred EccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceee
Q psy14906 323 NTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFL 402 (583)
Q Consensus 323 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 402 (583)
|+.+++....+.
T Consensus 246 d~~~~~~~~~~~-------------------------------------------------------------------- 257 (369)
T 3zwl_B 246 DVSTLQVLKKYE-------------------------------------------------------------------- 257 (369)
T ss_dssp ETTTCCEEEEEE--------------------------------------------------------------------
T ss_pred ECCCCceeeeec--------------------------------------------------------------------
Confidence 998876544331
Q ss_pred ecccccccCCCCceEEEEccCCcEEEEEecCc--------------eEEEEEcccCccccccCCCCCCCcccCeeEEEEe
Q psy14906 403 VPERCKQAKQSKPTCVYITHCGNFVLIGYSSG--------------HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSD 468 (583)
Q Consensus 403 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--------------~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s 468 (583)
+...+.+++|+|+++++++++.++ .+++||..+++....+ .+|...|++++|+
T Consensus 258 --------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-----~~~~~~v~~~~~s 324 (369)
T 3zwl_B 258 --------TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRV-----QGHFGPLNTVAIS 324 (369)
T ss_dssp --------CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEE-----ECCSSCEEEEEEC
T ss_pred --------CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhhe-----ecccCcEEEEEEC
Confidence 115688999999999999999888 8999999999998888 7899999999999
Q ss_pred CCCcEEEEeecCCcEEEEEccCC
Q psy14906 469 NLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 469 ~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
|++++|++++.||.|++|+++..
T Consensus 325 ~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 325 PQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp TTSSEEEEEETTSEEEEEEECHH
T ss_pred CCCCEEEEEcCCCeEEEEECccc
Confidence 99999999999999999999865
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=319.93 Aligned_cols=298 Identities=15% Similarity=0.181 Sum_probs=231.3
Q ss_pred EEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCC-CEEEEEecCCeEEEEEccCCceeEEEe--ccCCCeEEEE
Q psy14906 135 VWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVV-DIIGVGLSNKKIILHNILTDESLMEFI--QTWGPVTALS 211 (583)
Q Consensus 135 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~ 211 (583)
+|++...+....+. +|...|.+++|+|++ ++|++|+.||.|++||+.+++....+. +|...|.+++
T Consensus 57 ~~~~~~~~~~~~~~-----------~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~ 125 (383)
T 3ei3_B 57 IRSLKSYKLHRTAS-----------PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMK 125 (383)
T ss_dssp HHHHTTCEEEEEEC-----------CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEE
T ss_pred cccccccceEEecc-----------CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEE
Confidence 44445556666666 899999999999999 999999999999999999888887776 6889999999
Q ss_pred Eec-CCCCEEEEEcCCCcEEEEeCCCCeehhhhh--hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeE
Q psy14906 212 FRT-DGPPMMVSGSNTGHLTVWNLEDRQVENQIK--KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLR 288 (583)
Q Consensus 212 ~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~ 288 (583)
|+| +++ +|++++.|+.|++||+.+. .+..+. ..|...|.+++|+|++++|++++.|+.|++||+ ..+.+.
T Consensus 126 ~~~~~~~-~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-----~~~~~~ 198 (383)
T 3ei3_B 126 FNQFNTN-QLFVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-----DGHEIF 198 (383)
T ss_dssp EETTEEE-EEEEEETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-----TSCEEE
T ss_pred eCCCCCC-EEEEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-----CCCEEE
Confidence 999 556 8999999999999999864 333331 234578999999999999999999999999976 356778
Q ss_pred EeccCCCCCeeEEEeeCCCC-EEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeee
Q psy14906 289 IREGHSAPPNYIQFYGNSSD-NILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFG 367 (583)
Q Consensus 289 ~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (583)
.+.+|...|.+++|+| ++. ++++++.|+.|++||+.+.+....
T Consensus 199 ~~~~h~~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~----------------------------------- 242 (383)
T 3ei3_B 199 KEKLHKAKVTHAEFNP-RCDWLMATSSVDATVKLWDLRNIKDKNS----------------------------------- 242 (383)
T ss_dssp EEECSSSCEEEEEECS-SCTTEEEEEETTSEEEEEEGGGCCSTTC-----------------------------------
T ss_pred EeccCCCcEEEEEECC-CCCCEEEEEeCCCEEEEEeCCCCCcccc-----------------------------------
Confidence 8889999999999998 666 999999999999999876431100
Q ss_pred cccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccc
Q psy14906 368 LAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHR 447 (583)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 447 (583)
..
T Consensus 243 ------------------------------------------------------------------------------~~ 244 (383)
T 3ei3_B 243 ------------------------------------------------------------------------------YI 244 (383)
T ss_dssp ------------------------------------------------------------------------------EE
T ss_pred ------------------------------------------------------------------------------eE
Confidence 00
Q ss_pred cccCCCCCCCcccCeeEEEEeC-CCcEEEEeecCCcEEEEEccCCCCCceEEee------------------ccCCeeeE
Q psy14906 448 GSYGHDNQPGHVGGVRGVVSDN-LNQIVISGGNDQTVKVWHFKQTGKPPLRSIK------------------LDNGISFF 508 (583)
Q Consensus 448 ~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------------------~~~~v~~~ 508 (583)
.. .+|...|.+++|+| ++++|++++.|+.|++||+.+. .....+. ....+..+
T Consensus 245 ~~------~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 316 (383)
T 3ei3_B 245 AE------MPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW--SKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVA 316 (383)
T ss_dssp EE------EECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBT--TSCSEEEECCBCCCTTSCCCCCEECSSSSEEEE
T ss_pred EE------ecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC--ccccccccccccccccccceEEeccCCCCceEE
Confidence 00 12444555555555 5555555555555555555554 2222221 12345567
Q ss_pred EeccCCcEEEEEeCCceEEEEEccccceEEeecc--cccceeeEEecCCCcEEEEEeCCCeEEEEeCCC
Q psy14906 509 RTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG--HMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575 (583)
Q Consensus 509 ~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~ 575 (583)
+|+|++++ +++.|+.|++||+.+++.+..+.+ |...+..++|+|++++|++++ |+.|++||+++
T Consensus 317 ~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 317 GRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp ECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred EecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 77788777 778999999999999999999987 457788889999999999997 99999999875
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=318.68 Aligned_cols=311 Identities=15% Similarity=0.148 Sum_probs=254.1
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc--eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE--SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR 237 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 237 (583)
.|..+|.+++|+|++++|++++.|+.|++||+.+++ .+..+.+|...|.+++|+|+++ +|++++.||.|++||++++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN-RIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTT-EEEEEETTSCEEEEEEETT
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCC-EEEEEcCCCeEEEEECCCC
Confidence 678999999999999999999999999999999887 8888999999999999999998 8999999999999999888
Q ss_pred eehhhhh-hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC
Q psy14906 238 QVENQIK-KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD 316 (583)
Q Consensus 238 ~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 316 (583)
+....+. ..|...|.+++|+|++++|++++.|+.+++|+++..............|...|.+++|+| ++++|++++.|
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d 163 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP-NSVLLAAGSCD 163 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT-TSSEEEEEETT
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcC-CCCEEEEEcCC
Confidence 6443321 568899999999999999999999999999988754321123344467899999999997 89999999999
Q ss_pred CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccc
Q psy14906 317 STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSK 396 (583)
Q Consensus 317 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 396 (583)
|.|++||+...........
T Consensus 164 g~i~~~d~~~~~~~~~~~~------------------------------------------------------------- 182 (372)
T 1k8k_C 164 FKCRIFSAYIKEVEERPAP------------------------------------------------------------- 182 (372)
T ss_dssp SCEEEEECCCTTTSCCCCC-------------------------------------------------------------
T ss_pred CCEEEEEcccccccccccc-------------------------------------------------------------
Confidence 9999999865432110000
Q ss_pred ccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEE
Q psy14906 397 MDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476 (583)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 476 (583)
.+-+. ....++....+ ..|...|.+++|+|++++|++
T Consensus 183 ------------------------~~~~~--------------~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~ 219 (372)
T 1k8k_C 183 ------------------------TPWGS--------------KMPFGELMFES-----SSSCGWVHGVCFSANGSRVAW 219 (372)
T ss_dssp ------------------------BTTBS--------------CCCTTCEEEEC-----CCCSSCEEEEEECSSSSEEEE
T ss_pred ------------------------ccccc--------------ccchhhheEec-----CCCCCeEEEEEECCCCCEEEE
Confidence 00000 01223344444 578999999999999999999
Q ss_pred eecCCcEEEEEccCCCCCceEEeecc-CCeeeEEeccCCcEEEEEeCCceEEEEEccc--cce-----------------
Q psy14906 477 GGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSMLAVCLDDFTVNIIDIDT--CTI----------------- 536 (583)
Q Consensus 477 ~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~--~~~----------------- 536 (583)
++.|+.|++||+.++ +++..+..+ .++.+++|+|++++++++ .|+.|++|++.+ ++.
T Consensus 220 ~~~d~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (372)
T 1k8k_C 220 VSHDSTVCLADADKK--MAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGL 296 (372)
T ss_dssp EETTTEEEEEEGGGT--TEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------
T ss_pred EeCCCEEEEEECCCC--ceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhc
Confidence 999999999999988 777777655 589999999999999888 999999999987 421
Q ss_pred ---------------E------Eee-cccccceeeEEec-CCC---cEEEEEeCCCeEEEEeCCCcccc
Q psy14906 537 ---------------I------RKL-SGHMGQLTDADFS-PDS---RWLITASMDCTIRVWDIPSSQLI 579 (583)
Q Consensus 537 ---------------~------~~~-~~h~~~v~~l~~s-~d~---~~l~s~~~d~~i~vw~~~~~~~~ 579 (583)
. ..+ .+|...|++++|. ++| ++|++++.||.|++|++.+++.+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 297 TARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESA 365 (372)
T ss_dssp CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHHHH
T ss_pred chhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChhHh
Confidence 0 233 4899999999966 676 99999999999999999886543
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=324.53 Aligned_cols=313 Identities=16% Similarity=0.180 Sum_probs=248.2
Q ss_pred cCCcceEEEeeCCC----CCEEEEEecCCeEEEEEccCCceeEEEec-----cCCCeEEEEEecC----CCCEEEEEcCC
Q psy14906 160 RWNSCVNVLEPSPV----VDIIGVGLSNKKIILHNILTDESLMEFIQ-----TWGPVTALSFRTD----GPPMMVSGSNT 226 (583)
Q Consensus 160 ~~~~~i~~~~~s~~----~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~~l~s~~~d 226 (583)
+|...|.+++|+|+ ...+++++.++.|++||+.+++.+..+.. |...|.+++|+|+ ++ +|++|+.|
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d 94 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHP-LLAVAGSR 94 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCE-EEEEEETT
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCC-EEEEecCC
Confidence 89999999999984 45677777778999999998888777764 4477999999999 55 89999999
Q ss_pred CcEEEEeCCCCeehhhhhhccccceEEEEEec-CCCEEEEEeCCCeEEEEEccCCCCCceeeEEe---ccCCCCCeeEEE
Q psy14906 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLY-NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIR---EGHSAPPNYIQF 302 (583)
Q Consensus 227 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~---~~~~~~v~~~~~ 302 (583)
|.|++||+.+++.+..+ .+|...|.+++|+| ++++|++++.|+.|++||++ ..+.+..+ .+|...|.+++|
T Consensus 95 g~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~~~~~~~~v~~~~~ 169 (366)
T 3k26_A 95 GIIRIINPITMQCIKHY-VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ----TDTLVAIFGGVEGHRDEVLSADY 169 (366)
T ss_dssp CEEEEECTTTCCEEEEE-ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT----TTEEEEEECSTTSCSSCEEEEEE
T ss_pred CEEEEEEchhceEeeee-cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee----cCeEEEEecccccccCceeEEEE
Confidence 99999999999998888 78999999999999 89999999999999999775 45666666 689999999999
Q ss_pred eeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEec
Q psy14906 303 YGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHT 382 (583)
Q Consensus 303 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (583)
+| ++++|++++.||.|++||+.+++....+..
T Consensus 170 ~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----------------------------------------------- 201 (366)
T 3k26_A 170 DL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKE----------------------------------------------- 201 (366)
T ss_dssp CT-TSSEEEEEETTSCEEEEESCSHHHHHHHHH-----------------------------------------------
T ss_pred CC-CCCEEEEecCCCCEEEEECCCCccccccce-----------------------------------------------
Confidence 97 899999999999999999987765433211
Q ss_pred CCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCe
Q psy14906 383 GKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGV 462 (583)
Q Consensus 383 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v 462 (583)
.+.++|++..+......... ...... ..|...|
T Consensus 202 ----------------------------------~~~~~~~~~~~~~~~~~~~~--------~~~~~~-----~~~~~~v 234 (366)
T 3k26_A 202 ----------------------------------SYDYNPNKTNRPFISQKIHF--------PDFSTR-----DIHRNYV 234 (366)
T ss_dssp ----------------------------------HHTCCGGGCSSCCCCEEECC--------CSEEEC-----SSCSSCC
T ss_pred ----------------------------------eEEecCCCCcccccceeecc--------Cccccc-----cCCcceE
Confidence 00111222111111111000 001111 4688899
Q ss_pred eEEEEeCCCcEEEEeecCCcEEEEEccCCCC------------CceEEee-ccCCeeeEEeccC--CcEEEEEeCCceEE
Q psy14906 463 RGVVSDNLNQIVISGGNDQTVKVWHFKQTGK------------PPLRSIK-LDNGISFFRTHQE--SSMLAVCLDDFTVN 527 (583)
Q Consensus 463 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~------------~~~~~~~-~~~~v~~~~~s~~--~~~l~~~~~dg~i~ 527 (583)
.+++|+ +++|++++.|+.|++||+.+... ..+..+. +...+.+++|+|+ +++|++++.||.|+
T Consensus 235 ~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~ 312 (366)
T 3k26_A 235 DCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLY 312 (366)
T ss_dssp CEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEE
T ss_pred EEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEE
Confidence 999998 67899999999999999887631 1133333 4468999999999 99999999999999
Q ss_pred EEEccccc----eEEeeccc--ccceeeEEecCCCcEEEEEeCCCeEEEEeCCC
Q psy14906 528 IIDIDTCT----IIRKLSGH--MGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575 (583)
Q Consensus 528 i~d~~~~~----~~~~~~~h--~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~ 575 (583)
+||+.+++ ....+.+| ...|++++|+|++++|++++.||.|++||+.+
T Consensus 313 vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 313 VWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp EEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred EEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 99999875 34477777 78999999999999999999999999999864
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-40 Score=340.24 Aligned_cols=294 Identities=17% Similarity=0.216 Sum_probs=244.6
Q ss_pred eeeeecccCccEEEE--ccC-CCEEEEEeCCCcEEEEEcCCC-----cEEEEeeccCCceEEecccCCcceEEEeeCCCC
Q psy14906 103 IVGTYKGHTSPVHLI--LPF-GPHLISVDEESNVKVWDIKAE-----ETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVV 174 (583)
Q Consensus 103 ~~~~~~~h~~~v~~i--s~~-~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 174 (583)
....+++|.+.|+++ +|+ +++|++|+.|++|++||+.+. .....+. +|...|.+++|+|++
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~-----------~h~~~v~~v~~s~~g 442 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT-----------GHSHFVEDVVLSSDG 442 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEE-----------CCSSCEEEEEECTTS
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceec-----------CCCCcEEEEEECCCC
Confidence 345688999999998 565 479999999999999999763 3445555 999999999999999
Q ss_pred CEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhh--hhhccccceE
Q psy14906 175 DIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ--IKKAHRKVVT 252 (583)
Q Consensus 175 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--~~~~~~~~v~ 252 (583)
++|++|+.|++|++||+.+++.+..+.+|...|.+++|+|+++ +|++++.|++|++||......... ...+|...|.
T Consensus 443 ~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~ 521 (694)
T 3dm0_A 443 QFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVS 521 (694)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEE
T ss_pred CEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEE
Confidence 9999999999999999999999999999999999999999999 899999999999999875433221 1157889999
Q ss_pred EEEEecCC--CEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccc
Q psy14906 253 GAHFLYNE--PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330 (583)
Q Consensus 253 ~~~~~~~~--~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 330 (583)
+++|+|++ ..|++++.|+.|++||+. ..+....+.+|...|.+++|+| ++++|++++.||.|++||+.+++.+
T Consensus 522 ~~~~~~~~~~~~l~s~s~d~~v~vwd~~----~~~~~~~~~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~~ 596 (694)
T 3dm0_A 522 CVRFSPNTLQPTIVSASWDKTVKVWNLS----NCKLRSTLAGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKL 596 (694)
T ss_dssp EEEECSCSSSCEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTTTEEE
T ss_pred EEEEeCCCCcceEEEEeCCCeEEEEECC----CCcEEEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCceE
Confidence 99999987 589999999999999775 4567788999999999999997 8999999999999999999887654
Q ss_pred eeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccccccc
Q psy14906 331 KNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQA 410 (583)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 410 (583)
..+..
T Consensus 597 ~~~~~--------------------------------------------------------------------------- 601 (694)
T 3dm0_A 597 YSLEA--------------------------------------------------------------------------- 601 (694)
T ss_dssp ECCBC---------------------------------------------------------------------------
T ss_pred EEecC---------------------------------------------------------------------------
Confidence 32210
Q ss_pred CCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCC--------------CCcccCeeEEEEeCCCcEEEE
Q psy14906 411 KQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQ--------------PGHVGGVRGVVSDNLNQIVIS 476 (583)
Q Consensus 411 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--------------~~h~~~v~~~~~s~~~~~l~s 476 (583)
...+.+++|+|++.+++++.. +.|++||+.++..+..+..... ..+...+++++|+|++++|++
T Consensus 602 -~~~v~~~~~sp~~~~l~~~~~-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~s 679 (694)
T 3dm0_A 602 -NSVIHALCFSPNRYWLCAATE-HGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFS 679 (694)
T ss_dssp -SSCEEEEEECSSSSEEEEEET-TEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEE
T ss_pred -CCcEEEEEEcCCCcEEEEEcC-CCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEE
Confidence 146889999999998888765 4599999999887765531100 111224789999999999999
Q ss_pred eecCCcEEEEEccC
Q psy14906 477 GGNDQTVKVWHFKQ 490 (583)
Q Consensus 477 ~~~dg~i~iwd~~~ 490 (583)
|+.||.|++|++..
T Consensus 680 gs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 680 GYTDGVIRVWGIGR 693 (694)
T ss_dssp EETTSEEEEEEC--
T ss_pred EcCCCeEEEEeccC
Confidence 99999999999853
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-41 Score=318.26 Aligned_cols=299 Identities=15% Similarity=0.214 Sum_probs=244.6
Q ss_pred EEeccCCCeEEEEEecCCCCEEEEEcC---CCcEEEEeCCCCeehhhhhhccccceEEEEEecC---CCEEEEEeCCCeE
Q psy14906 199 EFIQTWGPVTALSFRTDGPPMMVSGSN---TGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN---EPLLVTSSPDNTL 272 (583)
Q Consensus 199 ~~~~~~~~v~~~~~~~~~~~~l~s~~~---dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~~i 272 (583)
.+.+|...|.+++|+|+++.++++++. |+.|++||+.+++.......+|...|.+++|+|+ +++|++++.|+.|
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 356799999999999999757778876 9999999999887765543579999999999998 6999999999999
Q ss_pred EEEEccCCCCCceeeEEeccCCCCCeeEEEee-----CCCCEEEEeeCCCcEEEEEccccc-cceeeccchhhhhhhhhh
Q psy14906 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYG-----NSSDNILSAAGDSTLRIFNTKSET-SNKNLGIASANRNNLKRK 346 (583)
Q Consensus 273 ~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~ 346 (583)
++|+++.. ...+..+.+|...|.++.|.+ +++++|++++.||.|++||+.++. ....+...
T Consensus 93 ~iwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~---------- 159 (357)
T 3i2n_A 93 HIWNLEAP---EMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPV---------- 159 (357)
T ss_dssp EEECTTSC---SSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCC----------
T ss_pred EEEeCCCC---CccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecccc----------
Confidence 99976532 226778889999999997642 378899999999999999998765 33222100
Q ss_pred cchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEE----Ecc
Q psy14906 347 NRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVY----ITH 422 (583)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~s~ 422 (583)
.......+.+++ |+|
T Consensus 160 -------------------------------------------------------------~~~~~~~v~~~~~~~~~~~ 178 (357)
T 3i2n_A 160 -------------------------------------------------------------QGENKRDCWTVAFGNAYNQ 178 (357)
T ss_dssp -------------------------------------------------------------TTSCCCCEEEEEEECCCC-
T ss_pred -------------------------------------------------------------CCCCCCceEEEEEEeccCC
Confidence 000013577777 789
Q ss_pred CCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC---CCcEEEEeecCCcEEEEEccCCCCCceEEe
Q psy14906 423 CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN---LNQIVISGGNDQTVKVWHFKQTGKPPLRSI 499 (583)
Q Consensus 423 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 499 (583)
+++++++++.||.|++||+.+++.... ..|...|.+++|+| ++++|++++.||.|++||+.+. +....+
T Consensus 179 ~~~~l~~~~~d~~i~i~d~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~ 250 (357)
T 3i2n_A 179 EERVVCAGYDNGDIKLFDLRNMALRWE------TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ--HPTKGF 250 (357)
T ss_dssp CCCEEEEEETTSEEEEEETTTTEEEEE------EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE--ETTTEE
T ss_pred CCCEEEEEccCCeEEEEECccCceeee------cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC--Ccccce
Confidence 999999999999999999999887554 37889999999999 9999999999999999999887 444333
Q ss_pred ------eccCCeeeEEeccCCc-EEEEEeCCceEEEEEcccc-------------------ceEEeecccccceeeEEec
Q psy14906 500 ------KLDNGISFFRTHQESS-MLAVCLDDFTVNIIDIDTC-------------------TIIRKLSGHMGQLTDADFS 553 (583)
Q Consensus 500 ------~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~-------------------~~~~~~~~h~~~v~~l~~s 553 (583)
.+...|.+++|+|+++ +|++++.||.|++||+.++ +.+..+.+|...|++++|+
T Consensus 251 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s 330 (357)
T 3i2n_A 251 ASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWS 330 (357)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEEC
T ss_pred eeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEc
Confidence 4667999999999999 8999999999999999854 4677788999999999999
Q ss_pred CCCcEEE-EEeCCCeEEEEeCCCcccc
Q psy14906 554 PDSRWLI-TASMDCTIRVWDIPSSQLI 579 (583)
Q Consensus 554 ~d~~~l~-s~~~d~~i~vw~~~~~~~~ 579 (583)
|++++|+ +++.|+.|++||+.+.+++
T Consensus 331 ~~~~~l~~s~~~d~~i~iw~~~~~~~i 357 (357)
T 3i2n_A 331 PDKRGLCVCSSFDQTVRVLIVTKLNKI 357 (357)
T ss_dssp SSSTTEEEEEETTSEEEEEEECC----
T ss_pred CCCCeEEEEecCCCcEEEEECCCcccC
Confidence 9999998 8999999999999987653
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=322.65 Aligned_cols=300 Identities=15% Similarity=0.165 Sum_probs=232.2
Q ss_pred ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeeh--hhhhhccccceEEEEEec-CCCEEEEEeCCCe
Q psy14906 195 ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE--NQIKKAHRKVVTGAHFLY-NEPLLVTSSPDNT 271 (583)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~ 271 (583)
+.......|...|++|+|+|.+..+||+|+.||.|+|||+.+++.. ..+ .+|.+.|++++|+| ++++|++++.|++
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~-~gH~~~V~~l~f~p~~~~~l~s~s~D~~ 188 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKG-IGAGGSITGLKFNPLNTNQFYASSMEGT 188 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECC-CSSSCCCCEEEECSSCTTEEEEECSSSC
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEc-cCCCCCEEEEEEeCCCCCEEEEEeCCCE
Confidence 3445566788899999999965558999999999999999876543 334 58999999999998 6889999999999
Q ss_pred EEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhc
Q psy14906 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEK 351 (583)
Q Consensus 272 i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (583)
|++||++. .....+.....+...+.+++|+| ++.+|++++.||.|++||++.... ..+
T Consensus 189 v~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~~~~-~~~------------------ 246 (435)
T 4e54_B 189 TRLQDFKG--NILRVFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMDGKEL-WNL------------------ 246 (435)
T ss_dssp EEEEETTS--CEEEEEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEESSSCBC-CCS------------------
T ss_pred EEEeeccC--CceeEEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeeccCccee-EEE------------------
Confidence 99997742 11222222233445678999997 899999999999999999864321 111
Q ss_pred cccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCc-EEEEE
Q psy14906 352 MNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGN-FVLIG 430 (583)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~ 430 (583)
..|...|.+++|+|+++ +++++
T Consensus 247 ---------------------------------------------------------~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 247 ---------------------------------------------------------RMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp ---------------------------------------------------------BCCSSCEEEEEECTTCSSEEEEE
T ss_pred ---------------------------------------------------------ecccceEEeeeecCCCceEEEEe
Confidence 11236799999999976 78889
Q ss_pred ecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc-------C
Q psy14906 431 YSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-------N 503 (583)
Q Consensus 431 ~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-------~ 503 (583)
+.|+.|++||+.+.+....+... .+|...|++++|+|++++|++++.||.|++||+.+. .....+..+ .
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~~~--~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~--~~~~~~~~~~~~~~~~~ 345 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFLYS--LPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW--DCPLGLIPHPHRHFQHL 345 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCSBC--CBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS--SSEEEECCCCCCCCSSS
T ss_pred cCcceeeEEecccccccceEEEe--eeccccccceeECCCCCeeEEEcCCCEEEEEECCCC--ccceEEecccccccccc
Confidence 99999999999887765544322 589999999999999999999999999999999987 555444322 1
Q ss_pred CeeeEEeccCCcEEEEEe------------CCceEEEEEccccceEEeec-ccccceeeE-EecCCCcEEEEEeCCCeEE
Q psy14906 504 GISFFRTHQESSMLAVCL------------DDFTVNIIDIDTCTIIRKLS-GHMGQLTDA-DFSPDSRWLITASMDCTIR 569 (583)
Q Consensus 504 ~v~~~~~s~~~~~l~~~~------------~dg~i~i~d~~~~~~~~~~~-~h~~~v~~l-~~s~d~~~l~s~~~d~~i~ 569 (583)
.+....|+|++.+++++. .++.|++||..+++.+..+. +|...|.++ +|+|+|++||+|+ |++|+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~ 424 (435)
T 4e54_B 346 TPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHIL 424 (435)
T ss_dssp CCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEE
T ss_pred eeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEE
Confidence 234557777777777764 23579999999999988764 688889998 6999999999876 88999
Q ss_pred EEeCCCcccc
Q psy14906 570 VWDIPSSQLI 579 (583)
Q Consensus 570 vw~~~~~~~~ 579 (583)
||++++|+..
T Consensus 425 iW~~~~gk~r 434 (435)
T 4e54_B 425 IWSQQEARTR 434 (435)
T ss_dssp ECCCC-----
T ss_pred EEECCcCeee
Confidence 9999998764
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-40 Score=316.34 Aligned_cols=291 Identities=11% Similarity=0.099 Sum_probs=247.3
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc------eeEEEeccCCCeEEEEEecC----C---CCEEEEEcCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE------SLMEFIQTWGPVTALSFRTD----G---PPMMVSGSNT 226 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~~l~s~~~d 226 (583)
+|...|.+++|+| ++|++|+.||.|++||+.+++ .+..+.+|...|.+++|+|+ + + +|++++.|
T Consensus 14 ~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~-~l~s~~~d 90 (397)
T 1sq9_A 14 AHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC-LVATTSFS 90 (397)
T ss_dssp CSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE-EEEEEETT
T ss_pred hhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCcccc-EEEEEcCC
Confidence 8999999999998 899999999999999999888 78889999999999999999 8 8 89999999
Q ss_pred CcEEEEeCCCCee-----hhhhhhcc-----ccceEEEEEe----cCCCE-EEEEeCCCeEEEEEccC------CCCC-c
Q psy14906 227 GHLTVWNLEDRQV-----ENQIKKAH-----RKVVTGAHFL----YNEPL-LVTSSPDNTLKLWIFDK------ADGN-G 284 (583)
Q Consensus 227 g~i~vwd~~~~~~-----~~~~~~~~-----~~~v~~~~~~----~~~~~-l~s~~~d~~i~~w~~~~------~~~~-~ 284 (583)
|.|++||+.+++. ...+ ..| ...|.+++|+ |++++ |++++.|+.|++|++.. .... .
T Consensus 91 g~i~iw~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 169 (397)
T 1sq9_A 91 GDLLFYRITREDETKKVIFEKL-DLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNW 169 (397)
T ss_dssp SCEEEEEEEECTTTCCEEEEEE-CCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCC
T ss_pred CCEEEEEccCCcccccccceee-cccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeec
Confidence 9999999998776 6666 677 5899999999 99999 99999999999998874 2111 1
Q ss_pred eeeEEe-------ccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccC
Q psy14906 285 RLLRIR-------EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFI 357 (583)
Q Consensus 285 ~~~~~~-------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (583)
.....+ ..|...|.+++|+| ++ .+++++.||.|++||+++++....+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~---------------------- 225 (397)
T 1sq9_A 170 SPTLELQGTVESPMTPSQFATSVDISE-RG-LIATGFNNGTVQISELSTLRPLYNFES---------------------- 225 (397)
T ss_dssp CCEEEEEEEECCSSSSCCCCCEEEECT-TS-EEEEECTTSEEEEEETTTTEEEEEEEC----------------------
T ss_pred cCcceeeeeeccccCCCCCceEEEECC-Cc-eEEEEeCCCcEEEEECCCCceeEEEec----------------------
Confidence 111144 45889999999998 67 999999999999999987654433210
Q ss_pred CCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccC---CCCceEEEEccCCcEEEEEecC-
Q psy14906 358 LPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAK---QSKPTCVYITHCGNFVLIGYSS- 433 (583)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~s~~~~~l~~~~~d- 433 (583)
...+ ...+.+++|+|++++|++++.|
T Consensus 226 --------------------------------------------------~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~ 255 (397)
T 1sq9_A 226 --------------------------------------------------QHSMINNSNSIRSVKFSPQGSLLAIAHDSN 255 (397)
T ss_dssp --------------------------------------------------CC---CCCCCEEEEEECSSTTEEEEEEEET
T ss_pred --------------------------------------------------cccccccCCccceEEECCCCCEEEEEecCC
Confidence 0001 2679999999999999999999
Q ss_pred --ceEEEEEcccCccccccCCCCCCC-------------cccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEE
Q psy14906 434 --GHVDRFNIQSGAHRGSYGHDNQPG-------------HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS 498 (583)
Q Consensus 434 --g~i~i~d~~~~~~~~~~~~~~~~~-------------h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 498 (583)
|.|++||+.+++....+ .. |...|.+++|+|++++|++++.||.|++||+.+. +++..
T Consensus 256 ~~g~i~i~d~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~ 328 (397)
T 1sq9_A 256 SFGCITLYETEFGERIGSL-----SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK--ERITT 328 (397)
T ss_dssp TEEEEEEEETTTCCEEEEE-----CBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--EEEEE
T ss_pred CCceEEEEECCCCccccee-----ccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC--ceeEE
Confidence 99999999999988887 56 9999999999999999999999999999999988 77777
Q ss_pred ee-------c---------------cCCeeeEEeccCC----------cEEEEEeCCceEEEEEccccc
Q psy14906 499 IK-------L---------------DNGISFFRTHQES----------SMLAVCLDDFTVNIIDIDTCT 535 (583)
Q Consensus 499 ~~-------~---------------~~~v~~~~~s~~~----------~~l~~~~~dg~i~i~d~~~~~ 535 (583)
+. + ...|.+++|+|++ ++|++++.||.|++||+++|+
T Consensus 329 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 329 LNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp EECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred EecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 76 3 6789999999998 799999999999999998764
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=314.45 Aligned_cols=288 Identities=15% Similarity=0.261 Sum_probs=246.3
Q ss_pred cceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEe--ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeeh
Q psy14906 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI--QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE 240 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 240 (583)
-.++.|+||++ ++||+|. |++|+|||..+++.+..+. +|...|++++|+|+|+ +|++|+.||.|++||+++++.+
T Consensus 106 ~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~-~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 106 YYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp TTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEE
T ss_pred ccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCC-EEEEEECCCeEEEEEcCCCcEE
Confidence 45778999975 5888775 8999999999999887665 6667899999999999 9999999999999999999999
Q ss_pred hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEE
Q psy14906 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLR 320 (583)
Q Consensus 241 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 320 (583)
..+ .+|...+.++.+ ++.+|++++.|+.+++|+... ....+..+.+|...+..+.++| ++.++++++.|+.++
T Consensus 183 ~~~-~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~---~~~~~~~~~~h~~~~~~~~~~~-~g~~l~s~~~D~~v~ 255 (420)
T 4gga_A 183 RNM-TSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRV---AEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVN 255 (420)
T ss_dssp EEE-CCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTS---SSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEE
T ss_pred EEE-eCCCCceEEEee--CCCEEEEEeCCCceeEeeecc---cceeeEEecccccceeeeeecC-CCCeeeeeeccccce
Confidence 998 899999998877 567999999999999997654 3456677889999999999997 789999999999999
Q ss_pred EEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccce
Q psy14906 321 IFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDM 400 (583)
Q Consensus 321 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 400 (583)
+|+..+++....
T Consensus 256 i~~~~~~~~~~~-------------------------------------------------------------------- 267 (420)
T 4gga_A 256 VWPSAPGEGGWV-------------------------------------------------------------------- 267 (420)
T ss_dssp EEESSCCSSCSC--------------------------------------------------------------------
T ss_pred EEeeccccccce--------------------------------------------------------------------
Confidence 999876432100
Q ss_pred eeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc-EEEE--e
Q psy14906 401 FLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ-IVIS--G 477 (583)
Q Consensus 401 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s--~ 477 (583)
..... ..|...|.+++|+|++. ++++ |
T Consensus 268 ---------------------------------------------~~~~~-----~~~~~~V~~~~~~p~~~~~la~~~g 297 (420)
T 4gga_A 268 ---------------------------------------------PLQTF-----TQHQGAVKAVAWCPWQSNVLATGGG 297 (420)
T ss_dssp ---------------------------------------------CSEEE-----CCCSSCEEEEEECTTCTTEEEEEEC
T ss_pred ---------------------------------------------eeeee-----cccCCceeeeeeCCCcccEEEEEee
Confidence 01111 47888999999999764 4544 4
Q ss_pred ecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEe--CCceEEEEEccccceEEeecccccceeeEEecCC
Q psy14906 478 GNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCL--DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPD 555 (583)
Q Consensus 478 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d 555 (583)
+.|++|++||+.++ .+...+..+..+.++.|+|+++.+++++ .|+.|+|||+.+++++..+.+|.+.|++++|+||
T Consensus 298 s~D~~I~iwd~~t~--~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spd 375 (420)
T 4gga_A 298 TSDRHIRIWNVCSG--ACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD 375 (420)
T ss_dssp TTTCEEEEEETTTT--EEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred cCCCEEEEEeCCcc--ccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 58999999999998 8889999999999999999999888765 6899999999999999999999999999999999
Q ss_pred CcEEEEEeCCCeEEEEeCCCccccc
Q psy14906 556 SRWLITASMDCTIRVWDIPSSQLID 580 (583)
Q Consensus 556 ~~~l~s~~~d~~i~vw~~~~~~~~~ 580 (583)
|++||||+.|++|+|||+.+..+.+
T Consensus 376 g~~l~S~s~D~tvriWdv~~~~~~~ 400 (420)
T 4gga_A 376 GATVASAAADETLRLWRCFELDPAR 400 (420)
T ss_dssp SSCEEEEETTTEEEEECCSCSSCC-
T ss_pred CCEEEEEecCCeEEEEECCCCCccc
Confidence 9999999999999999998765544
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=311.88 Aligned_cols=312 Identities=16% Similarity=0.188 Sum_probs=251.6
Q ss_pred ceeeeeecccCccEEEE--ccCC-CEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCC-CCCE
Q psy14906 101 IDIVGTYKGHTSPVHLI--LPFG-PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSP-VVDI 176 (583)
Q Consensus 101 ~~~~~~~~~h~~~v~~i--s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~ 176 (583)
.+....+.+|...|+++ +|++ ++|++++.||.|++||+.+++....+... +|...|.+++|+| ++++
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~~ 133 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGM---------GPGDAITGMKFNQFNTNQ 133 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCC---------STTCBEEEEEEETTEEEE
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecC---------CcCCceeEEEeCCCCCCE
Confidence 34567788999999997 8998 99999999999999999998887776532 6899999999999 7899
Q ss_pred EEEEecCCeEEEEEccCCceeEEEecc---CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEE
Q psy14906 177 IGVGLSNKKIILHNILTDESLMEFIQT---WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTG 253 (583)
Q Consensus 177 l~~~~~d~~i~iw~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~ 253 (583)
|++++.|+.|++||+.+ +.+..+..+ ...|.+++|+|+++ +|++++.|+.|++||+ +++.+..+ .+|...|.+
T Consensus 134 l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~-~~~~~~~~-~~h~~~v~~ 209 (383)
T 3ei3_B 134 LFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGL-DGHEIFKE-KLHKAKVTH 209 (383)
T ss_dssp EEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEET-TSCEEEEE-ECSSSCEEE
T ss_pred EEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEEC-CCCEEEEe-ccCCCcEEE
Confidence 99999999999999985 556666544 37899999999999 9999999999999999 46777777 789999999
Q ss_pred EEEecCCC-EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccccccee
Q psy14906 254 AHFLYNEP-LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKN 332 (583)
Q Consensus 254 ~~~~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 332 (583)
++|+|+++ +|++++.|+.|++||+.........+..+ +|...|.+++|+|.++.+|++++.|+.|++||+.+++....
T Consensus 210 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 210 AEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSE
T ss_pred EEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccc
Confidence 99999999 99999999999999887544335566655 69999999999975789999999999999999998876554
Q ss_pred eccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCC
Q psy14906 333 LGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQ 412 (583)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (583)
+....... .....++. ..|. ..
T Consensus 289 ~~~~~~~~--------------~~~~~~~~-------------------------~~~~-------------------p~ 310 (383)
T 3ei3_B 289 IIIHPHRQ--------------FQHLTPIK-------------------------ATWH-------------------PM 310 (383)
T ss_dssp EEECCBCC--------------CTTSCCCC-------------------------CEEC-------------------SS
T ss_pred cccccccc--------------cccccceE-------------------------Eecc-------------------CC
Confidence 42110000 00000000 0000 01
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccC
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQ 490 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 490 (583)
..+..++++|++++ +++.||.|++||+.+++.+..+.. ..|...+..++|+|++++|++++ |+.|++||+++
T Consensus 311 ~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~---~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 311 YDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRD---PNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp SSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECB---TTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecC---CCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 45667888999988 888999999999999999888731 12667888889999999999997 99999999875
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-41 Score=327.84 Aligned_cols=316 Identities=11% Similarity=0.059 Sum_probs=228.2
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcEE----EEeeccCCceEEecccCCcceEEEeeCCC------CCEEEEEecCCeEE
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEETY----LELSFDNDTFKIMGKRWNSCVNVLEPSPV------VDIIGVGLSNKKII 187 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~s~~------~~~l~~~~~d~~i~ 187 (583)
+|+++.+++++.|++|+|||+.+++.. ..+. .|.+.|.+++|+|+ +.+||+++.||+|+
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~-----------~~~~~V~~v~wsp~~~~~~~~~~LAs~s~Dgtvr 238 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIV-----------HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTIN 238 (524)
T ss_dssp ------------CEEEEEEEEETTTCCEEEEEEEE-----------ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEE
T ss_pred chhhhhhccCCCCceEEEEEccCCCCCceEEEEEE-----------ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEE
Confidence 689999999999999999999887642 2333 67789999999997 57999999999999
Q ss_pred EEEccCCce-----------eEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee-hhhhhhccccceEEE-
Q psy14906 188 LHNILTDES-----------LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV-ENQIKKAHRKVVTGA- 254 (583)
Q Consensus 188 iw~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~~v~~~- 254 (583)
+||+.+++. ...+.+|...|++++|++++ .|++|+.||+|++||+++++. ...+ .+|...|.++
T Consensus 239 lWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~~~~~~~~~-~~H~~~V~sv~ 315 (524)
T 2j04_B 239 FLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTDPEVPSFYD-QVHDSYILSVS 315 (524)
T ss_dssp EEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTBCSSCSEEE-ECSSSCEEEEE
T ss_pred EEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCCCCCceEEe-ecccccEEEEE
Confidence 999986642 34678899999999999864 799999999999999997643 3345 7899999999
Q ss_pred -EEecCC-CEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCC--CCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccc
Q psy14906 255 -HFLYNE-PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA--PPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330 (583)
Q Consensus 255 -~~~~~~-~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 330 (583)
+|+|++ ++|++++.|++|++||+. ..+....+.+|.. .|.+++|+| +++.+++++.|++|++||++++.+.
T Consensus 316 ~~~s~~g~~~laS~S~D~tvklWD~~----~~~~~~~~~~~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~~~ 390 (524)
T 2j04_B 316 TAYSDFEDTVVSTVAVDGYFYIFNPK----DIATTKTTVSRFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAFAV 390 (524)
T ss_dssp EECCTTSCCEEEEEETTSEEEEECGG----GHHHHCEEEEECSCCSCCCEEEET-TTTEEEEECSSSEEEEEETTCTTCC
T ss_pred EEcCCCCCeEEEEeccCCeEEEEECC----CCCcccccccccccCcccceEeCC-CcCeEEEeCCCCcEEEEECcccccc
Confidence 578887 899999999999999775 3444445555653 588999998 7889999999999999999876553
Q ss_pred eeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccccccc
Q psy14906 331 KNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQA 410 (583)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 410 (583)
..+. .
T Consensus 391 ~~l~---------------------------------------------------------------------------g 395 (524)
T 2j04_B 391 HPLV---------------------------------------------------------------------------S 395 (524)
T ss_dssp EEEE---------------------------------------------------------------------------E
T ss_pred eeee---------------------------------------------------------------------------c
Confidence 3220 1
Q ss_pred CCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEcc-
Q psy14906 411 KQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFK- 489 (583)
Q Consensus 411 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~- 489 (583)
|...|.+++|+|++++|++|+.||+|++||+..+ ............+...+.+++|+|+++.+. ... .+.+|+..
T Consensus 396 H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~--~~~~~~~~~ 471 (524)
T 2j04_B 396 RETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDS--SYEVYPLTV 471 (524)
T ss_dssp CSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEE-ECC--CCCCCC---
T ss_pred CCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEE-ccC--Cceeccccc
Confidence 2367999999999999999999999999998654 222110000001122578999999998553 222 23344433
Q ss_pred CCCCCceEEe-eccCCeeeEEeccCCc---EEEEEeCCceEEEEEccc
Q psy14906 490 QTGKPPLRSI-KLDNGISFFRTHQESS---MLAVCLDDFTVNIIDIDT 533 (583)
Q Consensus 490 ~~~~~~~~~~-~~~~~v~~~~~s~~~~---~l~~~~~dg~i~i~d~~~ 533 (583)
++ .++..+ .+...|.+++|+|++. .+|+|+.+|.|+||++.-
T Consensus 472 ~g--~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~ 517 (524)
T 2j04_B 472 ND--VSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSL 517 (524)
T ss_dssp ------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSC
T ss_pred CC--cceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccc
Confidence 22 334333 4567999999999965 999999999999999873
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-40 Score=318.10 Aligned_cols=362 Identities=14% Similarity=0.119 Sum_probs=256.5
Q ss_pred CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCC-CCCEEEEEecCCeEEEEEccCCceeEEEe-------
Q psy14906 130 ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSP-VVDIIGVGLSNKKIILHNILTDESLMEFI------- 201 (583)
Q Consensus 130 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~------- 201 (583)
++.+++|+++.++....+. .|.+.|.+++|+| ++++|++|+.||.|++||+.+++....+.
T Consensus 22 ~~~~~v~~~~~~~~~~~~~-----------~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~ 90 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVER-----------IHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSI 90 (408)
T ss_dssp HHHHHHHTEEECTTEEECC-----------CCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEE
T ss_pred cCcceeeccccCcceeeee-----------ccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccc
Confidence 4567888888888777776 8999999999999 99999999999999999999887665543
Q ss_pred ------ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecC---CCEEEEEeCCCeE
Q psy14906 202 ------QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN---EPLLVTSSPDNTL 272 (583)
Q Consensus 202 ------~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~~i 272 (583)
+|...|.+++|+|++..+|++++.||.|++||+.+++....+ .+...+.++.|++. +.++++++.|+.|
T Consensus 91 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 168 (408)
T 4a11_B 91 GRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF--NFEETVYSHHMSPVSTKHCLVAVGTRGPKV 168 (408)
T ss_dssp CTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEECSSCSSCCEEEEEESSSSE
T ss_pred cccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceec--cCCCceeeeEeecCCCCCcEEEEEcCCCeE
Confidence 488999999999944448999999999999999999988877 47889999999985 4599999999999
Q ss_pred EEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCC-EEEEeeCCCcEEEEEcccccc-ceeeccchhhhhhhhhhcchh
Q psy14906 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSD-NILSAAGDSTLRIFNTKSETS-NKNLGIASANRNNLKRKNRLE 350 (583)
Q Consensus 273 ~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 350 (583)
++|++. ....+..+.+|...|.+++|+| ++. .+++++.||.|++||++++.. ...+.....
T Consensus 169 ~~~d~~----~~~~~~~~~~~~~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------------ 231 (408)
T 4a11_B 169 QLCDLK----SGSCSHILQGHRQEILAVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHNG------------ 231 (408)
T ss_dssp EEEESS----SSCCCEEECCCCSCEEEEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTT------------
T ss_pred EEEeCC----CcceeeeecCCCCcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCCCccccccccccc------------
Confidence 999775 4566778889999999999998 565 689999999999999987652 221110000
Q ss_pred ccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEE
Q psy14906 351 KMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIG 430 (583)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 430 (583)
............+...+.+++|+|++++++++
T Consensus 232 ------------------------------------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 263 (408)
T 4a11_B 232 ------------------------------------------------KKSQAVESANTAHNGKVNGLCFTSDGLHLLTV 263 (408)
T ss_dssp ------------------------------------------------CSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE
T ss_pred ------------------------------------------------ccceeeccccccccCceeEEEEcCCCCEEEEe
Confidence 00000111122334789999999999999999
Q ss_pred ecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee-ccCCeeeEE
Q psy14906 431 YSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFR 509 (583)
Q Consensus 431 ~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~ 509 (583)
+.||.|++||+.+++....+...........+........+..+++++.|+.|++||+.++ +++..+. +...|.+++
T Consensus 264 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~--~~~~~~~~~~~~v~~~~ 341 (408)
T 4a11_B 264 GTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG--EQITMLKGHYKTVDCCV 341 (408)
T ss_dssp ETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC--CEEEEECCCSSCEEEEE
T ss_pred cCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCC--cceeeeccCCCeEEEEE
Confidence 9999999999998887655422111122222333333344566777788999999999998 8888776 557899999
Q ss_pred eccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecC-CCcEEEEEeCCCeEEEEeCC
Q psy14906 510 THQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSP-DSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 510 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~-d~~~l~s~~~d~~i~vw~~~ 574 (583)
|+|++++|++++.||.|++||+.+++.+.....+... ..+.+ +...+.+.+.|+.+++|+..
T Consensus 342 ~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 342 FQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK---SQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp EETTTTEEEEEETTSCEEEEEECC------------------------------------------
T ss_pred EcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEec---cccccccceeecccCccCceeecCCc
Confidence 9999999999999999999999999887655433222 23333 33445667789999999865
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=312.08 Aligned_cols=284 Identities=15% Similarity=0.239 Sum_probs=236.7
Q ss_pred ceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEec-cCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhh
Q psy14906 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQ-TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242 (583)
Q Consensus 164 ~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 242 (583)
.+.++.|++ ..+++++.|+.|++||+.+++....+.. |...|.+++|+|+++ +|++|+.||.|++||+.+++.+..
T Consensus 95 ~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~ 171 (401)
T 4aez_A 95 YLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGS-FLSVGLGNGLVDIYDVESQTKLRT 171 (401)
T ss_dssp TCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEEE
T ss_pred eEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCC-EEEEECCCCeEEEEECcCCeEEEE
Confidence 355566664 5577888999999999999998888775 778999999999998 899999999999999999999988
Q ss_pred hhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEE
Q psy14906 243 IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322 (583)
Q Consensus 243 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 322 (583)
+ .+|...|.+++| ++++|++++.|+.|++||+.. .......+.+|...|.+++|+| ++.+|++++.|+.|++|
T Consensus 172 ~-~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~---~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iw 244 (401)
T 4aez_A 172 M-AGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRI---ANHQIGTLQGHSSEVCGLAWRS-DGLQLASGGNDNVVQIW 244 (401)
T ss_dssp E-CCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTS---SSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred e-cCCCCceEEEEE--CCCEEEEEcCCCCEEEEeccc---CcceeeEEcCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEc
Confidence 8 799999999999 467999999999999997753 2355667778888888888887 77888888888888888
Q ss_pred EccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceee
Q psy14906 323 NTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFL 402 (583)
Q Consensus 323 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 402 (583)
|+.++.
T Consensus 245 d~~~~~-------------------------------------------------------------------------- 250 (401)
T 4aez_A 245 DARSSI-------------------------------------------------------------------------- 250 (401)
T ss_dssp ETTCSS--------------------------------------------------------------------------
T ss_pred cCCCCC--------------------------------------------------------------------------
Confidence 875432
Q ss_pred ecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc-EEEEee--c
Q psy14906 403 VPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ-IVISGG--N 479 (583)
Q Consensus 403 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~--~ 479 (583)
....+ ..|...|.+++|+|++. ++++++ .
T Consensus 251 -------------------------------------------~~~~~-----~~~~~~v~~~~~~p~~~~ll~~~~gs~ 282 (401)
T 4aez_A 251 -------------------------------------------PKFTK-----TNHNAAVKAVAWCPWQSNLLATGGGTM 282 (401)
T ss_dssp -------------------------------------------EEEEE-----CCCSSCCCEEEECTTSTTEEEEECCTT
T ss_pred -------------------------------------------ccEEe-----cCCcceEEEEEECCCCCCEEEEecCCC
Confidence 22222 57888999999999764 556654 7
Q ss_pred CCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEE--eCCceEEEEEccccceE--EeecccccceeeEEecCC
Q psy14906 480 DQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVC--LDDFTVNIIDIDTCTII--RKLSGHMGQLTDADFSPD 555 (583)
Q Consensus 480 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~--~~dg~i~i~d~~~~~~~--~~~~~h~~~v~~l~~s~d 555 (583)
|+.|++||+.++ +++..+.+...+.+++|+|++++++++ +.||.|++||+.+++.. ..+.+|...|.+++|+|+
T Consensus 283 d~~i~i~d~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~d 360 (401)
T 4aez_A 283 DKQIHFWNAATG--ARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPD 360 (401)
T ss_dssp TCEEEEEETTTC--CEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTT
T ss_pred CCEEEEEECCCC--CEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCC
Confidence 999999999998 888899888999999999999999995 48999999999986554 447789999999999999
Q ss_pred CcEEEEEeCCCeEEEEeCCCcccccc
Q psy14906 556 SRWLITASMDCTIRVWDIPSSQLIDC 581 (583)
Q Consensus 556 ~~~l~s~~~d~~i~vw~~~~~~~~~~ 581 (583)
+++|++++.||.|++|++.+++.+..
T Consensus 361 g~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 361 GRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp SSEEEEECTTSEEEEEECCC------
T ss_pred CCEEEEEeCCCcEEEEECCCCccccc
Confidence 99999999999999999999987754
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-41 Score=324.33 Aligned_cols=339 Identities=9% Similarity=0.019 Sum_probs=236.7
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCC--ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTD--ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR 237 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 237 (583)
.+..+|.+++|+|++++||+|+.|+.|++||+.++ +.+..+.+|...|.+++|+|+++ +|++++.|+.|++||+.++
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSN-RIVTCSQDRNAYVYEKRPD 87 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTC-CEEEEETTSSEEEC-----
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCC-EEEEEeCCCeEEEEEcCCC
Confidence 45679999999999999999999999999999988 78888999999999999999998 8999999999999999987
Q ss_pred e---ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEecc-CCCCCeeEEEeeCCCCEEEEe
Q psy14906 238 Q---VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREG-HSAPPNYIQFYGNSSDNILSA 313 (583)
Q Consensus 238 ~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~ 313 (583)
+ ....+ .+|...|.+++|+|++++|++++.|+.|++|+++... .......+.. |...|.+++|+| ++++|+++
T Consensus 88 ~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~ 164 (377)
T 3dwl_C 88 GTWKQTLVL-LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEN-DWWVSKHLKRPLRSTILSLDWHP-NNVLLAAG 164 (377)
T ss_dssp -CCCCEEEC-CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC------CCCCEEECSSCCSCEEEEEECT-TSSEEEEE
T ss_pred CceeeeeEe-cccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcc-cceeeeEeecccCCCeEEEEEcC-CCCEEEEE
Confidence 7 45555 6899999999999999999999999999999775322 1224566777 999999999998 89999999
Q ss_pred eCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecC
Q psy14906 314 AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFY 393 (583)
Q Consensus 314 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 393 (583)
+.|+.|++||+............. |...
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~----------------------------------------------------~~~~ 192 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASV----------------------------------------------------WGSR 192 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCS----------------------------------------------------SCSC
T ss_pred eCCCEEEEEEEEecccCCCccccc----------------------------------------------------cccc
Confidence 999999999997654321110000 0000
Q ss_pred cccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcc----ccccCCCCCCCcccCeeEEEEeC
Q psy14906 394 KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH----RGSYGHDNQPGHVGGVRGVVSDN 469 (583)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~~h~~~v~~~~~s~ 469 (583)
. ........+ .+...+.+++|+|++++|++++.||.|++||+.+++. +..+ ..|...|.+++|+|
T Consensus 193 ---~-~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-----~~~~~~v~~~~~s~ 261 (377)
T 3dwl_C 193 ---L-PFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITV-----KLSQLPLRSLLWAN 261 (377)
T ss_dssp ---C-CEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCE-----ECSSSCEEEEEEEE
T ss_pred ---c-chhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEee-----cCCCCceEEEEEcC
Confidence 0 000000011 3447899999999999999999999999999999887 5666 78999999999999
Q ss_pred CCcEEEEeecCCcEEEEEccCCCCCceEEeeccC----------------CeeeEEeccCCcEEEEEeCCceEEEEEccc
Q psy14906 470 LNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN----------------GISFFRTHQESSMLAVCLDDFTVNIIDIDT 533 (583)
Q Consensus 470 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------------~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 533 (583)
++++|++++.|+.+ +|+......+....+.... ...++.|++....+......+...
T Consensus 262 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~------ 334 (377)
T 3dwl_C 262 ESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQ------ 334 (377)
T ss_dssp TTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-----------------------------
T ss_pred CCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccc------
Confidence 99999999876655 7776643222222222211 123333333322222211111111
Q ss_pred cceEEeecccccceeeEEecCCC-c---EEEEEeCCCeEEEEeC
Q psy14906 534 CTIIRKLSGHMGQLTDADFSPDS-R---WLITASMDCTIRVWDI 573 (583)
Q Consensus 534 ~~~~~~~~~h~~~v~~l~~s~d~-~---~l~s~~~d~~i~vw~~ 573 (583)
........|...|+++++.++. . .|+|++.||.|++||+
T Consensus 335 -~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 335 -SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ---CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred -cccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 1222345699999999976543 3 6999999999999985
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-40 Score=309.98 Aligned_cols=287 Identities=13% Similarity=0.190 Sum_probs=221.4
Q ss_pred CCeEEEEEecCCCCEEEEEcCCC-------cEEEEeCCCCeehh----------hhhhccccceEEEEEecCCCEEEEE-
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTG-------HLTVWNLEDRQVEN----------QIKKAHRKVVTGAHFLYNEPLLVTS- 266 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg-------~i~vwd~~~~~~~~----------~~~~~~~~~v~~~~~~~~~~~l~s~- 266 (583)
.||++++|+||++ +|++|+.+. .|++|++..+.... .+ .+|...+.+++++ ++.++++
T Consensus 15 ~PV~sv~fs~dg~-~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l-~~~~~~v~s~~~~--~~~~~~g~ 90 (365)
T 4h5i_A 15 YPAYGAKFLNNDT-LLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFAL-EDNDDSPTAIDAS--KGIILVGC 90 (365)
T ss_dssp SCEEEEEEEETTE-EEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEEC-CTTSCCCCEEEEE--TTEEEEEC
T ss_pred CCEEEEEEeCCCc-EEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEc-cCCCCceEEEEeC--CCEEEEEE
Confidence 5899999999999 899886533 59999987654322 22 4567778777664 5566655
Q ss_pred ----------eCCCeEEEEEccCCCCCceeeEEec-----cCCCCCeeEEEeeCCCCEEEEe--eCCCcEEEEEcccccc
Q psy14906 267 ----------SPDNTLKLWIFDKADGNGRLLRIRE-----GHSAPPNYIQFYGNSSDNILSA--AGDSTLRIFNTKSETS 329 (583)
Q Consensus 267 ----------~~d~~i~~w~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~--~~dg~i~iwd~~~~~~ 329 (583)
+.|+.+++|+++............. .+...+..++|+| ||++++++ +.|++|++||+.+++.
T Consensus 91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~ 169 (365)
T 4h5i_A 91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTE 169 (365)
T ss_dssp CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEE
T ss_pred CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcE
Confidence 4578899998875443333333222 2345578999998 89887654 4789999999988765
Q ss_pred ceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccc
Q psy14906 330 NKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQ 409 (583)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 409 (583)
...+.
T Consensus 170 ~~~~~--------------------------------------------------------------------------- 174 (365)
T 4h5i_A 170 KFEIE--------------------------------------------------------------------------- 174 (365)
T ss_dssp EEEEE---------------------------------------------------------------------------
T ss_pred EEEeC---------------------------------------------------------------------------
Confidence 44331
Q ss_pred cCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCC----cEEE
Q psy14906 410 AKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ----TVKV 485 (583)
Q Consensus 410 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg----~i~i 485 (583)
+...|.+++|+|||+++++++.+ .+.+|+..+++....... ..|...|.+++|+|+++++++++.|+ .+++
T Consensus 175 -~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~---~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 175 -TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTD---FDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp -CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECC---CCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred -CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeec---CCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 11569999999999999999855 477777777766543322 57899999999999999999999887 6888
Q ss_pred EEccCCCCCce--EEe-eccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEe-ecccccceeeEEecCCCcEEEE
Q psy14906 486 WHFKQTGKPPL--RSI-KLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRK-LSGHMGQLTDADFSPDSRWLIT 561 (583)
Q Consensus 486 wd~~~~~~~~~--~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~h~~~v~~l~~s~d~~~l~s 561 (583)
|++........ ..+ .+..+|++++|+|||++||+|+.|++|+|||+++++++.. +.+|...|++|+|||||++|||
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS 329 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVAS 329 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEE
T ss_pred cccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEE
Confidence 98876521111 222 3456899999999999999999999999999999999987 5799999999999999999999
Q ss_pred EeCCCeEEEEeCCCc
Q psy14906 562 ASMDCTIRVWDIPSS 576 (583)
Q Consensus 562 ~~~d~~i~vw~~~~~ 576 (583)
+|.|++|+||++..+
T Consensus 330 ~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 330 VSAANTIHIIKLPLN 344 (365)
T ss_dssp EETTSEEEEEECCTT
T ss_pred EeCCCeEEEEEcCCC
Confidence 999999999999654
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-40 Score=318.21 Aligned_cols=358 Identities=13% Similarity=0.105 Sum_probs=252.1
Q ss_pred CCeEEEEecc-ceeeeeecccCccEEEE--cc-CCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEE--ecccCCcc
Q psy14906 91 NNIIYAWRRG-IDIVGTYKGHTSPVHLI--LP-FGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKI--MGKRWNSC 164 (583)
Q Consensus 91 ~~~i~vw~~~-~~~~~~~~~h~~~v~~i--s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 164 (583)
++.+++|+.. .+....+.+|.++|+++ +| ++++|++++.||.|++||+.+++....+......... ...+|...
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS 101 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCc
Confidence 3456677753 45567788999999997 88 9999999999999999999987654333211000000 00158999
Q ss_pred eEEEeeCC-CCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCC--CEEEEEcCCCcEEEEeCCCCeehh
Q psy14906 165 VNVLEPSP-VVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGP--PMMVSGSNTGHLTVWNLEDRQVEN 241 (583)
Q Consensus 165 i~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~s~~~dg~i~vwd~~~~~~~~ 241 (583)
|.+++|+| ++++|++++.||.|++||+.+++.+..+. +...+.++.|+|.+. .++++++.++.|++||+.+++.+.
T Consensus 102 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 180 (408)
T 4a11_B 102 VETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSH 180 (408)
T ss_dssp EEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCE
T ss_pred EEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceee
Confidence 99999999 78899999999999999999999888887 448999999998533 289999999999999999999888
Q ss_pred hhhhccccceEEEEEecCCC-EEEEEeCCCeEEEEEccCCCCCceeeEEe---------------ccCCCCCeeEEEeeC
Q psy14906 242 QIKKAHRKVVTGAHFLYNEP-LLVTSSPDNTLKLWIFDKADGNGRLLRIR---------------EGHSAPPNYIQFYGN 305 (583)
Q Consensus 242 ~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~---------------~~~~~~v~~~~~~~~ 305 (583)
.+ .+|...|.+++|+|+++ +|++++.|+.|++||+.... ..+..+ ..|...|.+++|+|
T Consensus 181 ~~-~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 255 (408)
T 4a11_B 181 IL-QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS---GCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS- 255 (408)
T ss_dssp EE-CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS---CCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-
T ss_pred ee-cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC---cccccccccccccceeeccccccccCceeEEEEcC-
Confidence 88 78999999999999998 58999999999999875432 122222 57889999999997
Q ss_pred CCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCc
Q psy14906 306 SSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKN 385 (583)
Q Consensus 306 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (583)
++++|++++.||.|++||+.+++..........
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~----------------------------------------------- 288 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVC----------------------------------------------- 288 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCC-----------------------------------------------
T ss_pred CCCEEEEecCCCeEEEEECCCCccceecccccc-----------------------------------------------
Confidence 899999999999999999988765432210000
Q ss_pred eEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEE
Q psy14906 386 KVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGV 465 (583)
Q Consensus 386 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~ 465 (583)
......+........+..+++++.++.|++||+.+++.+..+ .+|...|+++
T Consensus 289 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~-----~~~~~~v~~~ 340 (408)
T 4a11_B 289 -----------------------NNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML-----KGHYKTVDCC 340 (408)
T ss_dssp -----------------------CCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE-----CCCSSCEEEE
T ss_pred -----------------------ccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee-----ccCCCeEEEE
Confidence 000011222223344566777788999999999999999988 7899999999
Q ss_pred EEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEecc-CCcEEEEEeCCceEEEEEccc
Q psy14906 466 VSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ-ESSMLAVCLDDFTVNIIDIDT 533 (583)
Q Consensus 466 ~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~ 533 (583)
+|+|++++|++++.||.|++||+.+. +++.......... .+.+ ....+...+.++.+++|+...
T Consensus 341 ~~s~~~~~l~s~~~dg~i~iw~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~W~~~~ 405 (408)
T 4a11_B 341 VFQSNFQELYSGSRDCNILAWVPSLY--EPVPDDDETTTKS--QLNPAFEDAWSSSDEEGGTSAWSHPQ 405 (408)
T ss_dssp EEETTTTEEEEEETTSCEEEEEECC--------------------------------------------
T ss_pred EEcCCCCEEEEECCCCeEEEEeCCCC--CccCCCCceEecc--ccccccceeecccCccCceeecCCcc
Confidence 99999999999999999999999988 5554443332222 2232 333555677889999998753
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=307.91 Aligned_cols=297 Identities=13% Similarity=0.123 Sum_probs=248.0
Q ss_pred eecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCc--EEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe
Q psy14906 106 TYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEE--TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL 181 (583)
Q Consensus 106 ~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 181 (583)
.+..|..+|+++ +|++++|++++.|+.|++||+.+++ .+..+. .|...|.+++|+|++++|++++
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~-----------~h~~~v~~~~~~~~~~~l~~~~ 71 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK-----------EHNGQVTGVDWAPDSNRIVTCG 71 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE-----------CCSSCEEEEEEETTTTEEEEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec-----------CCCCcccEEEEeCCCCEEEEEc
Confidence 355689999987 9999999999999999999999987 777777 8999999999999999999999
Q ss_pred cCCeEEEEEccCCceeEEE--eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee---hhhhhhccccceEEEEE
Q psy14906 182 SNKKIILHNILTDESLMEF--IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV---ENQIKKAHRKVVTGAHF 256 (583)
Q Consensus 182 ~d~~i~iw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~---~~~~~~~~~~~v~~~~~ 256 (583)
.|+.|++||+.+++....+ ..|...|.+++|+|+++ +|++++.|+.|++||++.++. ...+..+|...|.+++|
T Consensus 72 ~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~ 150 (372)
T 1k8k_C 72 TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDW 150 (372)
T ss_dssp TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEE
T ss_pred CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEE
Confidence 9999999999988755544 57889999999999998 899999999999999987652 33333678999999999
Q ss_pred ecCCCEEEEEeCCCeEEEEEccCC--------------CCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEE
Q psy14906 257 LYNEPLLVTSSPDNTLKLWIFDKA--------------DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322 (583)
Q Consensus 257 ~~~~~~l~s~~~d~~i~~w~~~~~--------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 322 (583)
+|++++|++++.|+.+++||+... ......+..+.+|...|.+++|+| ++++|++++.|+.|++|
T Consensus 151 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~ 229 (372)
T 1k8k_C 151 HPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NGSRVAWVSHDSTVCLA 229 (372)
T ss_dssp CTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS-SSSEEEEEETTTEEEEE
T ss_pred cCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC-CCCEEEEEeCCCEEEEE
Confidence 999999999999999999986421 124577788889999999999997 78999999999999999
Q ss_pred EccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceee
Q psy14906 323 NTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFL 402 (583)
Q Consensus 323 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 402 (583)
|+.+++....+.
T Consensus 230 d~~~~~~~~~~~-------------------------------------------------------------------- 241 (372)
T 1k8k_C 230 DADKKMAVATLA-------------------------------------------------------------------- 241 (372)
T ss_dssp EGGGTTEEEEEE--------------------------------------------------------------------
T ss_pred ECCCCceeEEEc--------------------------------------------------------------------
Confidence 998776544321
Q ss_pred ecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEccc--Ccc--ccccC---------------------------
Q psy14906 403 VPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQS--GAH--RGSYG--------------------------- 451 (583)
Q Consensus 403 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~--~~~--~~~~~--------------------------- 451 (583)
.+...+.+++|+|+++++++| .|+.|++|++.+ +.. ...+.
T Consensus 242 -------~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (372)
T 1k8k_C 242 -------SETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEG 313 (372)
T ss_dssp -------CSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC----
T ss_pred -------cCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccccccccc
Confidence 112578999999999999888 899999999988 421 00000
Q ss_pred -----CCCCCCcccCeeEEEEe-CCC---cEEEEeecCCcEEEEEccCC
Q psy14906 452 -----HDNQPGHVGGVRGVVSD-NLN---QIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 452 -----~~~~~~h~~~v~~~~~s-~~~---~~l~s~~~dg~i~iwd~~~~ 491 (583)
.....+|...|++++|. +++ ++|++++.||.|++|++.+.
T Consensus 314 ~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 314 SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp -----CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHH
T ss_pred CccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecCh
Confidence 11114899999999966 666 99999999999999999764
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=297.23 Aligned_cols=291 Identities=18% Similarity=0.265 Sum_probs=250.7
Q ss_pred ceeeeeecccCccEEEE-ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEE
Q psy14906 101 IDIVGTYKGHTSPVHLI-LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV 179 (583)
Q Consensus 101 ~~~~~~~~~h~~~v~~i-s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 179 (583)
.+..+.+.+|.+.|+++ .|++++|++++.||.|++||+.+++....+. .|...|.+++|+|++++|++
T Consensus 8 ~~~~~~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~l~~ 76 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVY-----------TGQGFLNSVCYDSEKELLLF 76 (313)
T ss_dssp CEEEEEECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEE-----------ECSSCEEEEEEETTTTEEEE
T ss_pred HHHHHHhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEee-----------cCCccEEEEEECCCCCEEEE
Confidence 36788899999999997 6899999999999999999999998888887 88999999999999999999
Q ss_pred EecCCeEEEEEccCC---ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEE
Q psy14906 180 GLSNKKIILHNILTD---ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF 256 (583)
Q Consensus 180 ~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~ 256 (583)
++.|+.|++|++... +.+..+..|...|.+++| +++ ++++++.||.|++|| .++....+ ..|...+.+++|
T Consensus 77 ~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~-~l~~~~~d~~i~~~d--~~~~~~~~-~~~~~~v~~~~~ 150 (313)
T 3odt_A 77 GGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDG-VVISGSWDKTAKVWK--EGSLVYNL-QAHNASVWDAKV 150 (313)
T ss_dssp EETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETT-EEEEEETTSEEEEEE--TTEEEEEE-ECCSSCEEEEEE
T ss_pred ecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCC-EEEEEeCCCCEEEEc--CCcEEEec-ccCCCceeEEEE
Confidence 999999999998654 567788899999999999 445 899999999999999 56777777 789999999999
Q ss_pred ec-CCCEEEEEeCCCeEEEEEccCCCCCceeeEEecc-CCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeec
Q psy14906 257 LY-NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREG-HSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLG 334 (583)
Q Consensus 257 ~~-~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 334 (583)
.| +++++++++.|+.+++|| .......+.. |...+.+++|+| ++. +++++.||.|++||+.+++....+.
T Consensus 151 ~~~~~~~l~~~~~d~~i~i~d------~~~~~~~~~~~~~~~i~~~~~~~-~~~-~~~~~~dg~i~i~d~~~~~~~~~~~ 222 (313)
T 3odt_A 151 VSFSENKFLTASADKTIKLWQ------NDKVIKTFSGIHNDVVRHLAVVD-DGH-FISCSNDGLIKLVDMHTGDVLRTYE 222 (313)
T ss_dssp EETTTTEEEEEETTSCEEEEE------TTEEEEEECSSCSSCEEEEEEEE-TTE-EEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ccCCCCEEEEEECCCCEEEEe------cCceEEEEeccCcccEEEEEEcC-CCe-EEEccCCCeEEEEECCchhhhhhhh
Confidence 98 899999999999999996 2355566666 899999999998 566 9999999999999998765543321
Q ss_pred cchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCC
Q psy14906 335 IASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSK 414 (583)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (583)
.+...
T Consensus 223 ---------------------------------------------------------------------------~~~~~ 227 (313)
T 3odt_A 223 ---------------------------------------------------------------------------GHESF 227 (313)
T ss_dssp ---------------------------------------------------------------------------CCSSC
T ss_pred ---------------------------------------------------------------------------cCCce
Confidence 12267
Q ss_pred ceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCC
Q psy14906 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP 494 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 494 (583)
+.+++|+|++ .+++++.||.|++||+.+++....+ ..|...|.+++|+|+++ +++++.||.|++||+.++ +
T Consensus 228 i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~-----~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~--~ 298 (313)
T 3odt_A 228 VYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVI-----TLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKS--R 298 (313)
T ss_dssp EEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEE-----ECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGG--G
T ss_pred EEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEE-----eccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCC--c
Confidence 9999999999 6889999999999999999998888 68889999999999998 667899999999999987 4
Q ss_pred ceEEee
Q psy14906 495 PLRSIK 500 (583)
Q Consensus 495 ~~~~~~ 500 (583)
......
T Consensus 299 ~~~~~~ 304 (313)
T 3odt_A 299 WASEDE 304 (313)
T ss_dssp CCC---
T ss_pred eeehhh
Confidence 444433
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-39 Score=309.73 Aligned_cols=295 Identities=16% Similarity=0.216 Sum_probs=247.6
Q ss_pred eeeecccCcc--EEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe
Q psy14906 104 VGTYKGHTSP--VHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL 181 (583)
Q Consensus 104 ~~~~~~h~~~--v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 181 (583)
+....+|... +.++++++..+++++.|+.|++||+.+++....+.. .|...|.+++|+|++++|++|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~----------~~~~~v~~v~~s~~~~~l~~~~ 153 (401)
T 4aez_A 84 VLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAET----------DESTYVASVKWSHDGSFLSVGL 153 (401)
T ss_dssp EEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEEC----------CTTCCEEEEEECTTSSEEEEEE
T ss_pred eeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeec----------CCCCCEEEEEECCCCCEEEEEC
Confidence 3344466554 444677788899999999999999999998887762 4789999999999999999999
Q ss_pred cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC-CCeehhhhhhccccceEEEEEecCC
Q psy14906 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE-DRQVENQIKKAHRKVVTGAHFLYNE 260 (583)
Q Consensus 182 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~~~~v~~~~~~~~~ 260 (583)
.||.|++||+.+++.+..+.+|...|.+++|++ + ++++++.||.|++||++ .+.....+ .+|...|.+++|+|++
T Consensus 154 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~ 229 (401)
T 4aez_A 154 GNGLVDIYDVESQTKLRTMAGHQARVGCLSWNR--H-VLSSGSRSGAIHHHDVRIANHQIGTL-QGHSSEVCGLAWRSDG 229 (401)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSSCEEEEE-ECCSSCEEEEEECTTS
T ss_pred CCCeEEEEECcCCeEEEEecCCCCceEEEEECC--C-EEEEEcCCCCEEEEecccCcceeeEE-cCCCCCeeEEEEcCCC
Confidence 999999999999999999999999999999954 4 89999999999999998 45556666 7899999999999999
Q ss_pred CEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee--CCCcEEEEEccccccceeeccchh
Q psy14906 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA--GDSTLRIFNTKSETSNKNLGIASA 338 (583)
Q Consensus 261 ~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~ 338 (583)
++|++++.|+.|++||+. .......+..|...|.+++|+|.....+++++ .|+.|++||+.+++....+..
T Consensus 230 ~~l~s~~~d~~v~iwd~~----~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~--- 302 (401)
T 4aez_A 230 LQLASGGNDNVVQIWDAR----SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA--- 302 (401)
T ss_dssp SEEEEEETTSCEEEEETT----CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC---
T ss_pred CEEEEEeCCCeEEEccCC----CCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC---
Confidence 999999999999999775 45677788899999999999985556677765 799999999988765443311
Q ss_pred hhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEE
Q psy14906 339 NRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCV 418 (583)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 418 (583)
...+.++
T Consensus 303 -------------------------------------------------------------------------~~~v~~~ 309 (401)
T 4aez_A 303 -------------------------------------------------------------------------GSQVTSL 309 (401)
T ss_dssp -------------------------------------------------------------------------SSCEEEE
T ss_pred -------------------------------------------------------------------------CCcEEEE
Confidence 1568999
Q ss_pred EEccCCcEEEE--EecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCce
Q psy14906 419 YITHCGNFVLI--GYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPL 496 (583)
Q Consensus 419 ~~s~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 496 (583)
+|+|+++++++ |+.||.|++||+.++........ .+|...|.+++|+|++++|++++.||.|++|++.++ +.+
T Consensus 310 ~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~---~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~--~~~ 384 (401)
T 4aez_A 310 IWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDI---PAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG--DHV 384 (401)
T ss_dssp EECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEE---ECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC------
T ss_pred EECCCCCeEEEEeecCCCcEEEEecCCccceeEEEe---cCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC--ccc
Confidence 99999999999 55899999999998765544311 589999999999999999999999999999999887 444
Q ss_pred E
Q psy14906 497 R 497 (583)
Q Consensus 497 ~ 497 (583)
.
T Consensus 385 ~ 385 (401)
T 4aez_A 385 K 385 (401)
T ss_dssp -
T ss_pred c
Confidence 3
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=308.46 Aligned_cols=278 Identities=16% Similarity=0.249 Sum_probs=240.6
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCcee
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL 197 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~ 197 (583)
|+ ++.||+|. |++|+|||..+|+....+... +|...|++++|+|+|++||+|+.||.|++||+++++.+
T Consensus 114 S~-~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~---------~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~ 182 (420)
T 4gga_A 114 SS-GNVLAVAL-DNSVYLWSASSGDILQLLQME---------QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 182 (420)
T ss_dssp CT-TSEEEEEE-TTEEEEEETTTCCEEEEEECC---------STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CC-CCEEEEEe-CCEEEEEECCCCCEEEEEEec---------CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE
Confidence 54 35677665 999999999999988877644 77889999999999999999999999999999999999
Q ss_pred EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe-ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEE
Q psy14906 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ-VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWI 276 (583)
Q Consensus 198 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~ 276 (583)
..+.+|...+.++++++ . +|++|+.|+.+++||..... .+..+ .+|...+..+.|+|+++++++++.|+.+++|+
T Consensus 183 ~~~~~h~~~v~~~s~~~--~-~l~sgs~d~~i~~~d~~~~~~~~~~~-~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~ 258 (420)
T 4gga_A 183 RNMTSHSARVGSLSWNS--Y-ILSSGSRSGHIHHHDVRVAEHHVATL-SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 258 (420)
T ss_dssp EEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSSCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEeCCCCceEEEeeCC--C-EEEEEeCCCceeEeeecccceeeEEe-cccccceeeeeecCCCCeeeeeeccccceEEe
Confidence 99999999999988764 4 89999999999999998654 44555 78999999999999999999999999999998
Q ss_pred ccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEe--eCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcccc
Q psy14906 277 FDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSA--AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNE 354 (583)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (583)
..........+.....|...|.+++|+|.+...++++ +.|++|++||+.++.....+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~------------------- 319 (420)
T 4gga_A 259 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA------------------- 319 (420)
T ss_dssp SSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC-------------------
T ss_pred eccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc-------------------
Confidence 7655444556677888999999999999777777664 5799999999988765543311
Q ss_pred ccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe--c
Q psy14906 355 KFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY--S 432 (583)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~ 432 (583)
...+.++.|+|+++.+++++ .
T Consensus 320 ---------------------------------------------------------~~~v~~~~~~~~~~~lv~~sg~~ 342 (420)
T 4gga_A 320 ---------------------------------------------------------HSQVCSILWSPHYKELISGHGFA 342 (420)
T ss_dssp ---------------------------------------------------------SSCEEEEEEETTTTEEEEEECTT
T ss_pred ---------------------------------------------------------ccceeeeeecCCCCeEEEEEecC
Confidence 14688999999999888765 7
Q ss_pred CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 433 SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 433 dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
||.|++||+.+++.+..+ .+|.+.|++++|+|++++|++|+.|++|++||+...
T Consensus 343 d~~I~iwd~~~~~~v~~l-----~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 343 QNQLVIWKYPTMAKVAEL-----KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp TCCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred CCEEEEEECCCCcEEEEE-----cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 899999999999999998 899999999999999999999999999999999876
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-39 Score=305.76 Aligned_cols=295 Identities=15% Similarity=0.194 Sum_probs=237.1
Q ss_pred cCCcceEEEeeCCCCCEE-EEEec---CCeEEEEEccCCceeEEEe-ccCCCeEEEEEecC---CCCEEEEEcCCCcEEE
Q psy14906 160 RWNSCVNVLEPSPVVDII-GVGLS---NKKIILHNILTDESLMEFI-QTWGPVTALSFRTD---GPPMMVSGSNTGHLTV 231 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l-~~~~~---d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~---~~~~l~s~~~dg~i~v 231 (583)
+|...|.+++|+|++..+ ++++. |+.|++||+.+++...... +|...|.+++|+|+ +. +|++++.||.|++
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~dg~i~i 94 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQR-YLATGDFGGNLHI 94 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTC-CEEEEETTSCEEE
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCc-eEEEecCCCeEEE
Confidence 799999999999999655 55655 8999999999887765543 78899999999999 46 8999999999999
Q ss_pred EeCCCCe-ehhhhhhccccceEEEEE------ecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCC----CCeeE
Q psy14906 232 WNLEDRQ-VENQIKKAHRKVVTGAHF------LYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA----PPNYI 300 (583)
Q Consensus 232 wd~~~~~-~~~~~~~~~~~~v~~~~~------~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~----~v~~~ 300 (583)
||+.+++ .+..+ .+|...|.++.| +|++++|++++.|+.|++||+... ...+..+..|.. .+.++
T Consensus 95 wd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~---~~~~~~~~~~~~~~~~~v~~~ 170 (357)
T 3i2n_A 95 WNLEAPEMPVYSV-KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQK---DDPVANMEPVQGENKRDCWTV 170 (357)
T ss_dssp ECTTSCSSCSEEE-CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSC---SSCSEEECCCTTSCCCCEEEE
T ss_pred EeCCCCCccEEEE-EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCC---CCcceeccccCCCCCCceEEE
Confidence 9999887 77777 789999999955 688999999999999999976532 124455554443 78888
Q ss_pred E----EeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccccccccc
Q psy14906 301 Q----FYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNN 376 (583)
Q Consensus 301 ~----~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (583)
+ |+| ++.++++++.||.|++||+++++.....
T Consensus 171 ~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~------------------------------------------- 206 (357)
T 3i2n_A 171 AFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMALRWET------------------------------------------- 206 (357)
T ss_dssp EEECCCC--CCCEEEEEETTSEEEEEETTTTEEEEEE-------------------------------------------
T ss_pred EEEeccCC-CCCEEEEEccCCeEEEEECccCceeeec-------------------------------------------
Confidence 8 455 8999999999999999999876542211
Q ss_pred EEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc---CCcEEEEEecCceEEEEEcccCccccccCCC
Q psy14906 377 IAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH---CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHD 453 (583)
Q Consensus 377 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 453 (583)
.+...+.+++|+| +++++++++.||.|++||+.+++....+...
T Consensus 207 ---------------------------------~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 253 (357)
T 3i2n_A 207 ---------------------------------NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASV 253 (357)
T ss_dssp ---------------------------------ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEE
T ss_pred ---------------------------------CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeee
Confidence 1115799999999 9999999999999999999988776665211
Q ss_pred CCCCcccCeeEEEEeCCCc-EEEEeecCCcEEEEEccCCCCC-----------------ceEEee-ccCCeeeEEeccCC
Q psy14906 454 NQPGHVGGVRGVVSDNLNQ-IVISGGNDQTVKVWHFKQTGKP-----------------PLRSIK-LDNGISFFRTHQES 514 (583)
Q Consensus 454 ~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~-----------------~~~~~~-~~~~v~~~~~s~~~ 514 (583)
...+|...|++++|+|+++ +|++++.||.|++||+...... ++..+. +...|.+++|+|++
T Consensus 254 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 333 (357)
T 3i2n_A 254 SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDK 333 (357)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSS
T ss_pred ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCC
Confidence 1128999999999999998 8999999999999999865322 233333 45689999999999
Q ss_pred cEEE-EEeCCceEEEEEccccce
Q psy14906 515 SMLA-VCLDDFTVNIIDIDTCTI 536 (583)
Q Consensus 515 ~~l~-~~~~dg~i~i~d~~~~~~ 536 (583)
++|+ +++.|+.|++||+.+.+.
T Consensus 334 ~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 334 RGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp TTEEEEEETTSEEEEEEECC---
T ss_pred CeEEEEecCCCcEEEEECCCccc
Confidence 9998 799999999999987654
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=295.05 Aligned_cols=284 Identities=14% Similarity=0.243 Sum_probs=240.6
Q ss_pred ceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEe--ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehh
Q psy14906 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI--QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN 241 (583)
Q Consensus 164 ~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 241 (583)
..++|+||+++ +||+| .|++|+|||+.+++.+..+. +|...|++++|+|+++ +|++|+.||+|++||+++++++.
T Consensus 27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~-~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEEEE
T ss_pred cceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCC-EEEEEECCCcEEEeecCCceeEE
Confidence 35789999886 77776 58999999999999888765 6777899999999999 99999999999999999999999
Q ss_pred hhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEE
Q psy14906 242 QIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321 (583)
Q Consensus 242 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 321 (583)
.+ .+|...+.++. +++..+++++.++.+++|+... ....+..+.+|...+..+.+.+ +++++++++.|+.|++
T Consensus 104 ~~-~~h~~~~~~~~--~~~~~l~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~i 176 (318)
T 4ggc_A 104 NM-TSHSARVGSLS--WNSYILSSGSRSGHIHHHDVRV---AEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNV 176 (318)
T ss_dssp EE-ECCSSCEEEEE--EETTEEEEEETTSEEEEEETTS---SSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEE
T ss_pred Ee-cCccceEEEee--cCCCEEEEEecCCceEeeecCC---CceeEEEEcCccCceEEEEEcC-CCCEEEEEecCcceeE
Confidence 88 78998887655 4677999999999999996543 3456677888999999999986 7899999999999999
Q ss_pred EEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccccee
Q psy14906 322 FNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401 (583)
Q Consensus 322 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 401 (583)
||+.+++.....
T Consensus 177 wd~~~~~~~~~~-------------------------------------------------------------------- 188 (318)
T 4ggc_A 177 WPSAPGEGGWVP-------------------------------------------------------------------- 188 (318)
T ss_dssp EESSCBTTBSCC--------------------------------------------------------------------
T ss_pred EECCCCcccccc--------------------------------------------------------------------
Confidence 998765422110
Q ss_pred eecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcE---EEEee
Q psy14906 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQI---VISGG 478 (583)
Q Consensus 402 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~---l~s~~ 478 (583)
.... ..|.+.|.+++++|++.. +++++
T Consensus 189 ---------------------------------------------~~~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~ 218 (318)
T 4ggc_A 189 ---------------------------------------------LQTF-----TQHQGAVKAVAWCPWQSNVLATGGGT 218 (318)
T ss_dssp ---------------------------------------------SEEE-----CCCCSCEEEEEECTTSTTEEEEEECT
T ss_pred ---------------------------------------------eeee-----cccCCceEEEEecCCCCcEEEEEecC
Confidence 0001 456777888888887653 34677
Q ss_pred cCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEe--CCceEEEEEccccceEEeecccccceeeEEecCCC
Q psy14906 479 NDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCL--DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDS 556 (583)
Q Consensus 479 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~ 556 (583)
.++.|++||.... .......+...+..+.|+|+++.+++++ .|+.|++||+.+++++.++.+|.+.|++++|+||+
T Consensus 219 ~~~~i~lwd~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg 296 (318)
T 4ggc_A 219 SDRHIRIWNVCSG--ACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG 296 (318)
T ss_dssp TTCEEEEEETTTC--CEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred CCCEEEEEecccc--cccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC
Confidence 8999999999988 7778888888999999999999887765 78999999999999999999999999999999999
Q ss_pred cEEEEEeCCCeEEEEeCCCcc
Q psy14906 557 RWLITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 557 ~~l~s~~~d~~i~vw~~~~~~ 577 (583)
++|||++.|++|+|||+.+..
T Consensus 297 ~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 297 ATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp SCEEEEETTTEEEEECCSCCC
T ss_pred CEEEEEecCCeEEEEECCCCC
Confidence 999999999999999997654
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=320.93 Aligned_cols=322 Identities=11% Similarity=0.066 Sum_probs=251.9
Q ss_pred ccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeE
Q psy14906 109 GHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKI 186 (583)
Q Consensus 109 ~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i 186 (583)
.-...|.++ +|||+++|+++.|++|+ |...++.+ . +|...|.+++|+|+| .++.+
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~-----------gh~~~v~~V~FsPdg-------~~~~~ 69 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---N-----------CNSKNLFHVKEFPLE-------FENKL 69 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC---S-----------SBGGGTEEEEEECCC-------CCCTT
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--ccccccee---c-----------CCCccEEEEEECCCC-------CcceE
Confidence 445667776 99999999999999999 76655433 4 899999999999999 45555
Q ss_pred EEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhcccc-----ceEEEEEecCCC
Q psy14906 187 ILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRK-----VVTGAHFLYNEP 261 (583)
Q Consensus 187 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~ 261 (583)
.+|+.+ +..+..+ .|...|.+++|+|+|. +|++++.||.|++||.+. ++..+ . |.. .+.+++|+|||+
T Consensus 70 ~~~~~~-~~~~~~~-~~~~~V~~vawSPdG~-~LAs~s~dg~V~iwd~~~--~l~~l-~-~~~~~~~~sv~svafSPDG~ 142 (588)
T 2j04_A 70 DFELAQ-QNGLLNS-QPVCYPRVCKPSPIDD-WMAVLSNNGNVSVFKDNK--MLTNL-D-SKGNLSSRTYHCFEWNPIES 142 (588)
T ss_dssp TTSCCC-SSCSSTT-SCSCCEEEEEECSSSS-CEEEEETTSCEEEEETTE--EEEEC-C-CSSCSTTTCEEEEEECSSSS
T ss_pred EEEeCC-CceEeec-CCCCcEEEEEECCCCC-EEEEEeCCCcEEEEeCCc--eeeec-c-CCCccccccEEEEEEcCCCC
Confidence 555543 2222222 4478999999999999 899999999999999654 55556 4 554 599999999999
Q ss_pred EEEEEeCCCeEEEEEccCCCCC-c--eeeEEe----ccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeec
Q psy14906 262 LLVTSSPDNTLKLWIFDKADGN-G--RLLRIR----EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLG 334 (583)
Q Consensus 262 ~l~s~~~d~~i~~w~~~~~~~~-~--~~~~~~----~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 334 (583)
+|++|+.||+|++|++...... . -.+.++ .+|...|.+++|+| ++ +++++.|+++++||+.++......
T Consensus 143 ~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~~~~~- 218 (588)
T 2j04_A 143 SIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSHQPVS- 218 (588)
T ss_dssp CEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSSCCCE-
T ss_pred EEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCccccce-
Confidence 9999999999999977532100 0 135665 67888999999997 67 888999999999999776532100
Q ss_pred cchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCC
Q psy14906 335 IASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSK 414 (583)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (583)
..+...|...
T Consensus 219 ----------------------------------------------------------------------~tL~~~h~~~ 228 (588)
T 2j04_A 219 ----------------------------------------------------------------------RMIQNASRRK 228 (588)
T ss_dssp ----------------------------------------------------------------------EEEECCCSSC
T ss_pred ----------------------------------------------------------------------eeecccccCc
Confidence 0000112257
Q ss_pred ceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEE--eCCCcEEEEeecCCcEEEEEccCCC
Q psy14906 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVS--DNLNQIVISGGNDQTVKVWHFKQTG 492 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~--s~~~~~l~s~~~dg~i~iwd~~~~~ 492 (583)
|.+++|+ |+.+++++ ++.|++||+.+++..... .+|...|..++| +|++..|++++.||+ ++|..+
T Consensus 229 V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~-----~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d--- 296 (588)
T 2j04_A 229 ITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLK-----TGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED--- 296 (588)
T ss_dssp CCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEE-----CSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS---
T ss_pred EEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEE-----cCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec---
Confidence 9999999 68888887 699999999988774333 489999999999 999999999999999 999976
Q ss_pred CCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeC
Q psy14906 493 KPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASM 564 (583)
Q Consensus 493 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~ 564 (583)
.++++||+..++.. |+++++|+...+. +..+.+ ...|.+++|||||+.+|+++.
T Consensus 297 --------------~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 297 --------------ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp --------------SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred --------------cEEECCCceEEEEc--CCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 26699999988875 9999999986554 445554 778999999999999998873
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=300.28 Aligned_cols=247 Identities=15% Similarity=0.193 Sum_probs=214.0
Q ss_pred eecCCCCCCeEEEEeeC-------eEEEEEcCCeEEEEecc-ceeeeeecc-----cCccEEEE--ccC----CCEEEEE
Q psy14906 67 SVSPQHEDDITCLSSDF-------FHIYTSANNIIYAWRRG-IDIVGTYKG-----HTSPVHLI--LPF----GPHLISV 127 (583)
Q Consensus 67 ~~~~~h~~~v~~~~~~~-------~~~~~~~~~~i~vw~~~-~~~~~~~~~-----h~~~v~~i--s~~----~~~l~s~ 127 (583)
....+|..+|++++|++ .+++++.++.|++||.. ++.+..+.. |...|.++ +|+ +++|+++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 34568999999999963 38888888999999975 455555553 56779887 787 6799999
Q ss_pred eCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCC-CCCEEEEEecCCeEEEEEccCCceeEEE---ecc
Q psy14906 128 DEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSP-VVDIIGVGLSNKKIILHNILTDESLMEF---IQT 203 (583)
Q Consensus 128 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~---~~~ 203 (583)
+.||.|++||+.+++.+..+. +|...|.+++|+| ++++|++++.||.|++||+.+++.+..+ ..|
T Consensus 92 ~~dg~i~v~d~~~~~~~~~~~-----------~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 160 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIKHYV-----------GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGH 160 (366)
T ss_dssp ETTCEEEEECTTTCCEEEEEE-----------SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSC
T ss_pred cCCCEEEEEEchhceEeeeec-----------CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccc
Confidence 999999999999999999887 8999999999999 9999999999999999999999999988 689
Q ss_pred CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhc----------------------------cccceEEEE
Q psy14906 204 WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA----------------------------HRKVVTGAH 255 (583)
Q Consensus 204 ~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~----------------------------~~~~v~~~~ 255 (583)
...|.+++|+|+++ +|++++.||.|++||+++++....+ .. |...|.+++
T Consensus 161 ~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 238 (366)
T 3k26_A 161 RDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAI-KESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR 238 (366)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHH-HHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEE
T ss_pred cCceeEEEECCCCC-EEEEecCCCCEEEEECCCCcccccc-ceeEEecCCCCcccccceeeccCccccccCCcceEEEEE
Confidence 99999999999998 8999999999999999988877766 33 899999999
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCCCC----------CceeeEEeccCCCCCeeEEEeeCC--CCEEEEeeCCCcEEEEE
Q psy14906 256 FLYNEPLLVTSSPDNTLKLWIFDKADG----------NGRLLRIREGHSAPPNYIQFYGNS--SDNILSAAGDSTLRIFN 323 (583)
Q Consensus 256 ~~~~~~~l~s~~~d~~i~~w~~~~~~~----------~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~iwd 323 (583)
|+ +++|++++.|+.|++||+..... ....+..+..|...|.+++|+| + +++|++++.||.|++||
T Consensus 239 ~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~~l~~~~~dg~i~vwd 315 (366)
T 3k26_A 239 WL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSM-DFWQKMLALGNQVGKLYVWD 315 (366)
T ss_dssp EE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEE-CTTSSEEEEECTTSCEEEEE
T ss_pred Ec--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcC-CCCCcEEEEEecCCcEEEEE
Confidence 98 77999999999999998754321 1245777888999999999998 6 89999999999999999
Q ss_pred cccccc
Q psy14906 324 TKSETS 329 (583)
Q Consensus 324 ~~~~~~ 329 (583)
+.+++.
T Consensus 316 ~~~~~~ 321 (366)
T 3k26_A 316 LEVEDP 321 (366)
T ss_dssp CCSSSG
T ss_pred CCCCCC
Confidence 887653
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=313.78 Aligned_cols=297 Identities=12% Similarity=0.089 Sum_probs=226.8
Q ss_pred cCCcceEEEeeCC-CCCEEEEEecCCeEEEEEccCCceeE--EEeccCCCeEEEEEecC-CCCEEEEEcCCCcEEEEeCC
Q psy14906 160 RWNSCVNVLEPSP-VVDIIGVGLSNKKIILHNILTDESLM--EFIQTWGPVTALSFRTD-GPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 160 ~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~--~~~~~~~~v~~~~~~~~-~~~~l~s~~~dg~i~vwd~~ 235 (583)
.|...|++|+|+| ++++||+|+.||.|+|||+.+++... .+.+|.+.|++++|+|. +. +|++++.||+|++||++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~-~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTN-QFYASSMEGTTRLQDFK 195 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTT-EEEEECSSSCEEEEETT
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCC-EEEEEeCCCEEEEeecc
Confidence 7788999999999 56799999999999999998776544 45589999999999984 55 99999999999999998
Q ss_pred CCeehhhhh-hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee
Q psy14906 236 DRQVENQIK-KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 236 ~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 314 (583)
++....... ..+...+.+++|+|++++|++|+.||.|++||++ .+.+..+.+|...|.+++|+|....++++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-----~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s 270 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-----GKELWNLRMHKKKVTHVALNPCCDWFLATAS 270 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-----SCBCCCSBCCSSCEEEEEECTTCSSEEEEEE
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-----cceeEEEecccceEEeeeecCCCceEEEEec
Confidence 765433220 2234467899999999999999999999999764 3456678899999999999985556888999
Q ss_pred CCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCc
Q psy14906 315 GDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYK 394 (583)
Q Consensus 315 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 394 (583)
.|+.|++||+++.+....+.
T Consensus 271 ~d~~v~iwd~~~~~~~~~~~------------------------------------------------------------ 290 (435)
T 4e54_B 271 VDQTVKIWDLRQVRGKASFL------------------------------------------------------------ 290 (435)
T ss_dssp TTSBCCEEETTTCCSSSCCS------------------------------------------------------------
T ss_pred CcceeeEEecccccccceEE------------------------------------------------------------
Confidence 99999999998765432220
Q ss_pred ccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCC-CCcccCeeEEEEeCCCcE
Q psy14906 395 SKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQ-PGHVGGVRGVVSDNLNQI 473 (583)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~ 473 (583)
....|...|++++|+|+|++|++++.||.|++||+.++.....+..... ......+....|+|++.+
T Consensus 291 ------------~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (435)
T 4e54_B 291 ------------YSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNL 358 (435)
T ss_dssp ------------BCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSC
T ss_pred ------------EeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCE
Confidence 0112236799999999999999999999999999998887665521100 011112334566666666
Q ss_pred EEEee------------cCCcEEEEEccCCCCCceEEee--ccCCeeeE-EeccCCcEEEEEeCCceEEEEEccccceE
Q psy14906 474 VISGG------------NDQTVKVWHFKQTGKPPLRSIK--LDNGISFF-RTHQESSMLAVCLDDFTVNIIDIDTCTII 537 (583)
Q Consensus 474 l~s~~------------~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~~-~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 537 (583)
+++++ .++.|++||..++ +.+..+. +...|.++ +|+|+|++||+|+ |+.|+|||+++++..
T Consensus 359 ~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g--~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 359 IVVGRYPDPNFKSCTPYELRTIDVFDGNSG--KMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp EEEECCCCTTSCCSSTTCCCCEEEECSSSC--CEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred EEEEEcCCCCeEEEEecCCCEEEEEECCCC--cEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 55543 3457999999998 7776653 44578887 6999999999876 779999999988753
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=309.96 Aligned_cols=337 Identities=15% Similarity=0.160 Sum_probs=250.5
Q ss_pred EEecCCcEEEeec-CCCCCCeEEEEeeC----eEEEEEcCCeEEEEeccc----eee-eeec-ccCccEEEE--ccCCCE
Q psy14906 57 VYGCNHFKLLSVS-PQHEDDITCLSSDF----FHIYTSANNIIYAWRRGI----DIV-GTYK-GHTSPVHLI--LPFGPH 123 (583)
Q Consensus 57 v~d~~~~~~~~~~-~~h~~~v~~~~~~~----~~~~~~~~~~i~vw~~~~----~~~-~~~~-~h~~~v~~i--s~~~~~ 123 (583)
.|+ .+++++..+ .+|.+.|+++++++ .+++++.|++|++||... ... ..+. +|..+|.++ +|++++
T Consensus 47 ~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 125 (437)
T 3gre_A 47 MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDA 125 (437)
T ss_dssp GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSE
T ss_pred ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCE
Confidence 488 456777777 89999999999854 577888999999999743 111 1222 699999997 899999
Q ss_pred EEEEeCCCcEEEEEcC---CCcEEEEeeccCCceEEeccc--CCcceEEEe--eCCCCCEEEEEecCCeEEEEEccCCce
Q psy14906 124 LISVDEESNVKVWDIK---AEETYLELSFDNDTFKIMGKR--WNSCVNVLE--PSPVVDIIGVGLSNKKIILHNILTDES 196 (583)
Q Consensus 124 l~s~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~--~s~~~~~l~~~~~d~~i~iw~~~~~~~ 196 (583)
|++++.||.|++||+. +++.......... ..+.-.. +...+.++. +++++++|++++.|+.|++||+++++.
T Consensus 126 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 204 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVNHYQQESEVKFLNCECI-RKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLER 204 (437)
T ss_dssp EEEEETTSEEEEEEEEEEEETTEEEEEEEEEE-EEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEeCCCEEEEEEeccccCCceeecccccee-EEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCee
Confidence 9999999999999995 5555544331100 0000001 567788887 668999999999999999999999999
Q ss_pred eEEEec--cCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEe----cCCCEEEEEeCCC
Q psy14906 197 LMEFIQ--TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL----YNEPLLVTSSPDN 270 (583)
Q Consensus 197 ~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~s~~~d~ 270 (583)
+..+.. |...|++++|+|+++ +|++|+.||.|++||+++++++..+...|...|.+++|+ +++.+|++++.|+
T Consensus 205 ~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg 283 (437)
T 3gre_A 205 LQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKT 283 (437)
T ss_dssp EEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTE
T ss_pred eEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCC
Confidence 999987 889999999999998 999999999999999999999887743788899999665 4678999999999
Q ss_pred eEEEEEccCCCCCceeeEEecc--------------------------CCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEc
Q psy14906 271 TLKLWIFDKADGNGRLLRIREG--------------------------HSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324 (583)
Q Consensus 271 ~i~~w~~~~~~~~~~~~~~~~~--------------------------~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 324 (583)
.|++||+. .++.+..+.+ |...|.+++|+ ++.+|++++.|+.|++||+
T Consensus 284 ~i~iwd~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~d~~i~~wd~ 357 (437)
T 3gre_A 284 FLTIWNFV----KGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS--NDKILLTDEATSSIVMFSL 357 (437)
T ss_dssp EEEEEETT----TTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE--TTEEEEEEGGGTEEEEEET
T ss_pred cEEEEEcC----CCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC--CceEEEecCCCCeEEEEEC
Confidence 99999775 3444444443 55568888998 5689999999999999999
Q ss_pred cccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeec
Q psy14906 325 KSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVP 404 (583)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 404 (583)
.+++....+.....
T Consensus 358 ~~~~~~~~~~~~~~------------------------------------------------------------------ 371 (437)
T 3gre_A 358 NELSSSKAVISPSR------------------------------------------------------------------ 371 (437)
T ss_dssp TCGGGCEEEECC--------------------------------------------------------------------
T ss_pred CCcccceEEecccc------------------------------------------------------------------
Confidence 98876654421100
Q ss_pred ccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCC--CcEEEEeecCCc
Q psy14906 405 ERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNL--NQIVISGGNDQT 482 (583)
Q Consensus 405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~~~dg~ 482 (583)
.........++++..+++.. ++...+...... ..|...|++++|+++ +.+|++++.||.
T Consensus 372 ------~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-----~~h~~~I~~i~~~~~~~~~~l~s~~~dG~ 432 (437)
T 3gre_A 372 ------FSDVFIPTQVTANLTMLLRK--------MKRTSTHSVDDS-----LYHHDIINSISTCEVDETPLLVACDNSGL 432 (437)
T ss_dssp ------CCCEEEEEEEETTEEEEEEE--------CC------------------CCCEEEEEEEESSSSEEEEEEETTSC
T ss_pred ------cCceEEEEEeecceEEEEEe--------cccccccccCcc-----cccccceeeEeeeccCCceEEEEEcCCce
Confidence 00234445555555554443 222223333333 579999999999998 789999999999
Q ss_pred EEEEE
Q psy14906 483 VKVWH 487 (583)
Q Consensus 483 i~iwd 487 (583)
|+||+
T Consensus 433 I~iw~ 437 (437)
T 3gre_A 433 IGIFQ 437 (437)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 99995
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-38 Score=304.94 Aligned_cols=293 Identities=19% Similarity=0.309 Sum_probs=239.3
Q ss_pred ecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeE
Q psy14906 107 YKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKI 186 (583)
Q Consensus 107 ~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i 186 (583)
..+|...|.++++++++|++|+.||.|++||+.+++.+..+. +|...|.+++| ++++|++|+.||.|
T Consensus 129 ~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~-----------~h~~~v~~l~~--~~~~l~sg~~dg~i 195 (435)
T 1p22_A 129 RSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT-----------GHTGSVLCLQY--DERVIITGSSDSTV 195 (435)
T ss_dssp CCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEEC-----------CCSSCEEEEEC--CSSEEEEEETTSCE
T ss_pred ccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEc-----------CCCCcEEEEEE--CCCEEEEEcCCCeE
Confidence 346778899999999999999999999999999999999987 89999999999 78999999999999
Q ss_pred EEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeeh---hhhhhccccceEEEEEecCCCEE
Q psy14906 187 ILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE---NQIKKAHRKVVTGAHFLYNEPLL 263 (583)
Q Consensus 187 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l 263 (583)
++||+.+++.+..+.+|...|.+++|+++ ++++|+.||.|++||+.+++.. ..+ .+|...|.+++| +++++
T Consensus 196 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~---~l~s~s~dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~--~~~~l 269 (435)
T 1p22_A 196 RVWDVNTGEMLNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDMASPTDITLRRVL-VGHRAAVNVVDF--DDKYI 269 (435)
T ss_dssp EEEESSSCCEEEEECCCCSCEEEEECCTT---EEEEEETTSCEEEEECSSSSCCEEEEEE-CCCSSCEEEEEE--ETTEE
T ss_pred EEEECCCCcEEEEEcCCCCcEEEEEEcCC---EEEEeeCCCcEEEEeCCCCCCceeeeEe-cCCCCcEEEEEe--CCCEE
Confidence 99999999999999999999999999743 8999999999999999987655 445 789999999999 78899
Q ss_pred EEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhh
Q psy14906 264 VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNL 343 (583)
Q Consensus 264 ~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 343 (583)
++++.|+.|++||+. ..+.+..+.+|...|.++.+. +.++++++.||.|++||+.+++....+.
T Consensus 270 ~s~~~dg~i~vwd~~----~~~~~~~~~~~~~~v~~~~~~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~--------- 333 (435)
T 1p22_A 270 VSASGDRTIKVWNTS----TCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLE--------- 333 (435)
T ss_dssp EEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEEC---------
T ss_pred EEEeCCCeEEEEECC----cCcEEEEEcCCCCcEEEEEeC---CCEEEEEeCCCeEEEEECCCCCEEEEEe---------
Confidence 999999999999775 567788889999999999984 6799999999999999998876544331
Q ss_pred hhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC
Q psy14906 344 KRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC 423 (583)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 423 (583)
.+...+.++++ +
T Consensus 334 ------------------------------------------------------------------~h~~~v~~~~~--~ 345 (435)
T 1p22_A 334 ------------------------------------------------------------------GHEELVRCIRF--D 345 (435)
T ss_dssp ------------------------------------------------------------------CCSSCEEEEEC--C
T ss_pred ------------------------------------------------------------------CCcCcEEEEEe--c
Confidence 12256888888 7
Q ss_pred CcEEEEEecCceEEEEEcccCc---------cccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCC
Q psy14906 424 GNFVLIGYSSGHVDRFNIQSGA---------HRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP 494 (583)
Q Consensus 424 ~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 494 (583)
++++++|+.||.|++||+.++. ....+ .+|.+.|.+++| ++++|++++.||.|++||+.+. .
T Consensus 346 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-----~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~--~ 416 (435)
T 1p22_A 346 NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL-----VEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND--P 416 (435)
T ss_dssp SSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEE-----CCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-------
T ss_pred CCEEEEEeCCCcEEEEECCCCCCccccccchheeec-----cCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCC--C
Confidence 8999999999999999998766 55555 689999999999 7889999999999999999887 4
Q ss_pred ceEEeeccCCeeeEEec
Q psy14906 495 PLRSIKLDNGISFFRTH 511 (583)
Q Consensus 495 ~~~~~~~~~~v~~~~~s 511 (583)
.........+..++.|.
T Consensus 417 ~~~~~~~~~~~~~~~~~ 433 (435)
T 1p22_A 417 AAQAEPPRSPSRTYTYI 433 (435)
T ss_dssp -----------------
T ss_pred CcccCCCCCCccceeee
Confidence 44444444455555554
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=311.27 Aligned_cols=296 Identities=13% Similarity=0.117 Sum_probs=227.0
Q ss_pred eecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCC--cEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe
Q psy14906 106 TYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAE--ETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL 181 (583)
Q Consensus 106 ~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 181 (583)
.+..|.++|+++ +|++++||+++.|+.|++||+.++ +.+..+. +|...|.+++|+|++++|++++
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-----------~h~~~v~~~~~s~~~~~l~s~s 74 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFS-----------DHDKIVTCVDWAPKSNRIVTCS 74 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBC-----------CCSSCEEEEEECTTTCCEEEEE
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEe-----------cCCceEEEEEEeCCCCEEEEEe
Confidence 344567788876 999999999999999999999988 5666665 8999999999999999999999
Q ss_pred cCCeEEEEEccCCc---eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe---ehhhhhhc-cccceEEE
Q psy14906 182 SNKKIILHNILTDE---SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ---VENQIKKA-HRKVVTGA 254 (583)
Q Consensus 182 ~d~~i~iw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~-~~~~v~~~ 254 (583)
.|+.|++||+.+++ ....+..|...|.+++|+|+++ +|++++.|+.|++||+++++ ....+ .. |...|.++
T Consensus 75 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~-~~~h~~~v~~~ 152 (377)
T 3dwl_C 75 QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWWVSKHL-KRPLRSTILSL 152 (377)
T ss_dssp TTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CCCCEEE-CSSCCSCEEEE
T ss_pred CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccceeeeEe-ecccCCCeEEE
Confidence 99999999999877 6777888999999999999998 89999999999999999876 35666 45 99999999
Q ss_pred EEecCCCEEEEEeCCCeEEEEEccCCC--------------CCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEE
Q psy14906 255 HFLYNEPLLVTSSPDNTLKLWIFDKAD--------------GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLR 320 (583)
Q Consensus 255 ~~~~~~~~l~s~~~d~~i~~w~~~~~~--------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 320 (583)
+|+|++++|++++.|+.|++||++... .....+..+ +|...|.+++|+| ++++|++++.||.|+
T Consensus 153 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~~~~d~~i~ 230 (377)
T 3dwl_C 153 DWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSP-SGNALAYAGHDSSVT 230 (377)
T ss_dssp EECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECT-TSSCEEEEETTTEEC
T ss_pred EEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECC-CCCEEEEEeCCCcEE
Confidence 999999999999999999999875221 124455556 8999999999998 899999999999999
Q ss_pred EEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccce
Q psy14906 321 IFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDM 400 (583)
Q Consensus 321 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 400 (583)
+||+.+++......
T Consensus 231 iwd~~~~~~~~~~~------------------------------------------------------------------ 244 (377)
T 3dwl_C 231 IAYPSAPEQPPRAL------------------------------------------------------------------ 244 (377)
T ss_dssp -CEECSTTSCEEEC------------------------------------------------------------------
T ss_pred EEECCCCCCcceee------------------------------------------------------------------
Confidence 99998876521100
Q ss_pred eeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCc--cccccC---------------------------
Q psy14906 401 FLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGA--HRGSYG--------------------------- 451 (583)
Q Consensus 401 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~--------------------------- 451 (583)
.....+...+.+++|+|++++|++++.++.+ +|+..... ....+.
T Consensus 245 -----~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (377)
T 3dwl_C 245 -----ITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFT 318 (377)
T ss_dssp -----CCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------
T ss_pred -----EeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccc
Confidence 0001122578999999999999999877755 66654211 000000
Q ss_pred ------------------CCCCCCcccCeeEEEEeCCC-c---EEEEeecCCcEEEEEc
Q psy14906 452 ------------------HDNQPGHVGGVRGVVSDNLN-Q---IVISGGNDQTVKVWHF 488 (583)
Q Consensus 452 ------------------~~~~~~h~~~v~~~~~s~~~-~---~l~s~~~dg~i~iwd~ 488 (583)
......|...|+++++.+.. . .|+|++.||.|++||+
T Consensus 319 ~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 319 ALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 00012399999999976643 3 6999999999999985
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-37 Score=287.30 Aligned_cols=280 Identities=16% Similarity=0.223 Sum_probs=235.6
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc
Q psy14906 116 LILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE 195 (583)
Q Consensus 116 ~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~ 195 (583)
+.|+++ .||+| .|++|+|||+.+++++..+... +|...|.+++|+|++++||+|+.||+|++||+++++
T Consensus 32 ~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~---------~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~ 100 (318)
T 4ggc_A 32 DWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQME---------QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 100 (318)
T ss_dssp EECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECC---------STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred EECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEec---------CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCce
Confidence 347765 66665 5999999999999998887654 788899999999999999999999999999999999
Q ss_pred eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee-hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEE
Q psy14906 196 SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV-ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKL 274 (583)
Q Consensus 196 ~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~ 274 (583)
.+..+.+|...+.++.+. +. ++++++.++.+++|+...... +..+ .+|...+..+.+.+++++|++++.|+.|++
T Consensus 101 ~~~~~~~h~~~~~~~~~~--~~-~l~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i 176 (318)
T 4ggc_A 101 RLRNMTSHSARVGSLSWN--SY-ILSSGSRSGHIHHHDVRVAEHHVATL-SGHSQEVCGLRWAPDGRHLASGGNDNLVNV 176 (318)
T ss_dssp EEEEEECCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eEEEecCccceEEEeecC--CC-EEEEEecCCceEeeecCCCceeEEEE-cCccCceEEEEEcCCCCEEEEEecCcceeE
Confidence 999999998888776654 44 899999999999999987644 4444 789999999999999999999999999999
Q ss_pred EEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEE--EEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcc
Q psy14906 275 WIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNI--LSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKM 352 (583)
Q Consensus 275 w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l--~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (583)
||+...............+...|.++.++|.+...+ ++++.+++|++||...........
T Consensus 177 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~------------------ 238 (318)
T 4ggc_A 177 WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD------------------ 238 (318)
T ss_dssp EESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE------------------
T ss_pred EECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc------------------
Confidence 987654434455666777888999999998555554 356678999999987754432211
Q ss_pred ccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe-
Q psy14906 353 NEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY- 431 (583)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~- 431 (583)
+...+..+.++|+++.+++++
T Consensus 239 ----------------------------------------------------------~~~~v~~~~~~~~~~~~~~~sg 260 (318)
T 4ggc_A 239 ----------------------------------------------------------AHSQVCSILWSPHYKELISGHG 260 (318)
T ss_dssp ----------------------------------------------------------CSSCEEEEEEETTTTEEEEEEC
T ss_pred ----------------------------------------------------------ceeeeeeeeecccccceEEEEE
Confidence 115688999999998887754
Q ss_pred -cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 432 -SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 432 -~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
.|+.|++||+.+++.+..+ .+|.+.|++++|+|++++|++++.||+|+|||+...
T Consensus 261 ~~d~~i~iwd~~~~~~~~~l-----~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 261 FAQNQLVIWKYPTMAKVAEL-----KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp TTTCCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cCCCEEEEEECCCCcEEEEE-----cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 7999999999999999998 799999999999999999999999999999999764
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=304.68 Aligned_cols=297 Identities=11% Similarity=0.207 Sum_probs=233.4
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc-----------eeEEEeccC------------CCeEEEEEecCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE-----------SLMEFIQTW------------GPVTALSFRTDG 216 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~ 216 (583)
.+.+.|.+++|+|++++||+|+.||.|++||+.+++ ....+.+|. ..|++++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 457899999999999999999999999999999877 577888998 889999999998
Q ss_pred --CCEEEEEcCCCcEEEEeCCCCeeh---------------------------------------hhhhhccccceEEEE
Q psy14906 217 --PPMMVSGSNTGHLTVWNLEDRQVE---------------------------------------NQIKKAHRKVVTGAH 255 (583)
Q Consensus 217 --~~~l~s~~~dg~i~vwd~~~~~~~---------------------------------------~~~~~~~~~~v~~~~ 255 (583)
. +|++++.|+.|++||+.+++.. ..+..+|...|.+++
T Consensus 106 ~~~-~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 106 NAA-QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp SSS-EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred Ccc-eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 5 8999999999999999764431 122257999999999
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCCCCCceeeE-------EeccCCCCCeeEEEeeCCC-CEEEEeeCCCcEEEEEcccc
Q psy14906 256 FLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLR-------IREGHSAPPNYIQFYGNSS-DNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 256 ~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~ 327 (583)
|+|++++|+++ .|+.|++||++. ....+. .+.+|...|.+++|+| ++ .+|++++.||.|++||++++
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEI---TDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVYSSSKGTIRLCDMRAS 259 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTE---EEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEEEETTSCEEEEETTTC
T ss_pred EcCCCCEEEEe-CCCeEEEEECCC---CCceeeeeecccccccccCcceEEEEECC-CCCcEEEEEeCCCeEEEEECcCC
Confidence 99999999998 799999997752 122333 2568999999999998 56 89999999999999999876
Q ss_pred ccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccc
Q psy14906 328 TSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERC 407 (583)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 407 (583)
+.....
T Consensus 260 ~~~~~~-------------------------------------------------------------------------- 265 (447)
T 3dw8_B 260 ALCDRH-------------------------------------------------------------------------- 265 (447)
T ss_dssp SSSCTT--------------------------------------------------------------------------
T ss_pred ccccce--------------------------------------------------------------------------
Confidence 531100
Q ss_pred cccCCCCceEEEEccCCcEEEEEecCceEEEEEccc-CccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEE
Q psy14906 408 KQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQS-GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486 (583)
Q Consensus 408 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iw 486 (583)
+. .+.... ......+ ..|...|.+++|+|++++|++++. +.|++|
T Consensus 266 -------~~---------------------~~~~~~~~~~~~~~-----~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iw 311 (447)
T 3dw8_B 266 -------SK---------------------LFEEPEDPSNRSFF-----SEIISSISDVKFSHSGRYMMTRDY-LSVKVW 311 (447)
T ss_dssp -------CE---------------------EECCC-----CCHH-----HHHTTCEEEEEECTTSSEEEEEES-SEEEEE
T ss_pred -------ee---------------------EeccCCCccccccc-----cccCceEEEEEECCCCCEEEEeeC-CeEEEE
Confidence 00 000000 0000112 457779999999999999999998 999999
Q ss_pred EccC-CCCCceEEeeccCCe----------------eeEEeccCCcEEEEEeCCceEEEEEccccceEEeec--------
Q psy14906 487 HFKQ-TGKPPLRSIKLDNGI----------------SFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLS-------- 541 (583)
Q Consensus 487 d~~~-~~~~~~~~~~~~~~v----------------~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------- 541 (583)
|+.. + +++..+..+..+ ..++|+|++++|++|+.||.|++||+.+++.+. +.
T Consensus 312 d~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~ 388 (447)
T 3dw8_B 312 DLNMEN--RPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKP 388 (447)
T ss_dssp ETTCCS--SCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCT
T ss_pred eCCCCc--cccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeeccccccc
Confidence 9987 5 666666655432 339999999999999999999999999887653 22
Q ss_pred -------------------------ccccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 542 -------------------------GHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 542 -------------------------~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
.+...|..++|+|++++||+++.++ +++|.-+
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 389 RTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp TCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred ccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 2345688999999999999998776 7888643
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=294.73 Aligned_cols=245 Identities=11% Similarity=0.051 Sum_probs=175.0
Q ss_pred CCCeEEEEe--eCeEEEEEc--------CCeEEEEeccce-----------eeeeecccCccEEEEccCCCEEEEEe---
Q psy14906 73 EDDITCLSS--DFFHIYTSA--------NNIIYAWRRGID-----------IVGTYKGHTSPVHLILPFGPHLISVD--- 128 (583)
Q Consensus 73 ~~~v~~~~~--~~~~~~~~~--------~~~i~vw~~~~~-----------~~~~~~~h~~~v~~is~~~~~l~s~~--- 128 (583)
..||+|++| |+++++++. ++.|++|++... ....|.+|+..|.+++++++.++++.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~ 93 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNEN 93 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCC
Confidence 468999998 667766653 336999996321 12346789999999999999988874
Q ss_pred --------CCCcEEEEEcCCCcEEEE----eeccCCceEEecccCCcceEEEeeCCCCCEEEEEe--cCCeEEEEEccCC
Q psy14906 129 --------EESNVKVWDIKAEETYLE----LSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL--SNKKIILHNILTD 194 (583)
Q Consensus 129 --------~dg~i~iwd~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~d~~i~iw~~~~~ 194 (583)
.|+.+++|++.++..... ..+... ..+...+.+++|||||++||+++ .|++|+|||++++
T Consensus 94 ~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~ 167 (365)
T 4h5i_A 94 STKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDAS------TNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL 167 (365)
T ss_dssp HHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCC------CCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT
T ss_pred ccEEEEecCCCcEEEEEecCCCceEEEeeeeceeec------CCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC
Confidence 367799999876532221 111100 14556789999999999987654 6899999999999
Q ss_pred ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehh-hhhhccccceEEEEEecCCCEEEEEeCCC---
Q psy14906 195 ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN-QIKKAHRKVVTGAHFLYNEPLLVTSSPDN--- 270 (583)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~d~--- 270 (583)
+.+..+. |...|.+++|+|||+ ++++++.+ .+.+|+..+++.+. ....+|...|.+++|+|+++++++++.|+
T Consensus 168 ~~~~~~~-~~~~V~~v~fspdg~-~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~ 244 (365)
T 4h5i_A 168 TEKFEIE-TRGEVKDLHFSTDGK-VVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKG 244 (365)
T ss_dssp EEEEEEE-CSSCCCEEEECTTSS-EEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCC
T ss_pred cEEEEeC-CCCceEEEEEccCCc-eEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcce
Confidence 9998886 558899999999999 88888855 56677766665443 33357889999999999999999998887
Q ss_pred -eEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccc
Q psy14906 271 -TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 271 -~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
.+++|++............+.+|...|++++|+| ++++|++|+.|++|++||+.++
T Consensus 245 ~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 245 IVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM-KGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT-TSCEEEEEETTSCEEEEETTTT
T ss_pred eEEeecccccceecceeeeeecCCCCCeEeEEECC-CCCceEEEcCCCEEEEEECCCC
Confidence 5777865432111222344556666666666665 5666666666666666665543
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-37 Score=283.72 Aligned_cols=210 Identities=17% Similarity=0.243 Sum_probs=180.1
Q ss_pred eeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCC--CcEEEEeeccCCceEEecccCCcceEEEeeCCC--CCEE
Q psy14906 104 VGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKA--EETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV--VDII 177 (583)
Q Consensus 104 ~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l 177 (583)
+..+.+|.+.|.++ +|+|++||+++.|++|+|||+.+ ++.+.++. +|...|.+++|+++ +++|
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~-----------gH~~~V~~v~~s~~~~g~~l 70 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLT-----------GHEGPVWRVDWAHPKFGTIL 70 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEEC-----------CCSSCEEEEEECCGGGCSEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEc-----------cccCCeEEEEecCCCcCCEE
Confidence 34678999999987 89999999999999999999975 35667776 99999999999874 8999
Q ss_pred EEEecCCeEEEEEccCCc--eeEEEeccCCCeEEEEEecC--CCCEEEEEcCCCcEEEEeCCCCee--hhhhhhccccce
Q psy14906 178 GVGLSNKKIILHNILTDE--SLMEFIQTWGPVTALSFRTD--GPPMMVSGSNTGHLTVWNLEDRQV--ENQIKKAHRKVV 251 (583)
Q Consensus 178 ~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~~v 251 (583)
++|+.|++|++||+++++ .+..+.+|...|.+++|+|+ +. +|++++.|+.|++||++++.. ...+ .+|...|
T Consensus 71 ~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~~~-~~h~~~v 148 (297)
T 2pm7_B 71 ASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGV 148 (297)
T ss_dssp EEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBCCEEE-ECCSSCE
T ss_pred EEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCceeeeee-ecccCcc
Confidence 999999999999998874 56778889999999999998 66 899999999999999987632 2334 6899999
Q ss_pred EEEEEecC-------------CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC--CCEEEEeeCC
Q psy14906 252 TGAHFLYN-------------EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS--SDNILSAAGD 316 (583)
Q Consensus 252 ~~~~~~~~-------------~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~d 316 (583)
.+++|+|+ +++|++++.|+.|++||++...........+.+|...|.+++|+|.. +.+|++++.|
T Consensus 149 ~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D 228 (297)
T 2pm7_B 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQD 228 (297)
T ss_dssp EEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred ceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECC
Confidence 99999997 57999999999999998864332233667889999999999999832 4899999999
Q ss_pred CcEEEEEccc
Q psy14906 317 STLRIFNTKS 326 (583)
Q Consensus 317 g~i~iwd~~~ 326 (583)
++|++||+.+
T Consensus 229 ~~v~iWd~~~ 238 (297)
T 2pm7_B 229 RTCIIWTQDN 238 (297)
T ss_dssp SCEEEEEESS
T ss_pred CcEEEEEeCC
Confidence 9999999865
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=292.71 Aligned_cols=313 Identities=14% Similarity=0.188 Sum_probs=232.3
Q ss_pred EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC----eehhhhhhccccceEEEEEec--CCCEEEEEeCCCe
Q psy14906 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR----QVENQIKKAHRKVVTGAHFLY--NEPLLVTSSPDNT 271 (583)
Q Consensus 198 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~----~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~ 271 (583)
..+.+|.+.|++++|+|+++ +|++++.||.|++||+.++ +....+ .+|...|.+++|+| ++++|++++.|+.
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGR-HVATCSSDQHIKVFKLDKDTSNWELSDSW-RAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CEECCCSSCEEEEEECSSSS-EEEEEETTSEEEEEEECSSSCCEEEEEEE-ECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ccCcccccceeEEEEcCCCC-EEEEeeCCCeEEEEECCCCCCcceeccee-ccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 34678999999999999999 8999999999999999876 455566 68999999999999 6999999999999
Q ss_pred EEEEEccCCCCC-----ceeeEEeccCCCCCeeEEEeeCC--CCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhh
Q psy14906 272 LKLWIFDKADGN-----GRLLRIREGHSAPPNYIQFYGNS--SDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLK 344 (583)
Q Consensus 272 i~~w~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 344 (583)
|++|+++..... .+.+..+..|...|.+++|+| + +.+|++++.||.|++||+.+++....+......
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~----- 156 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEM----- 156 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEE-----
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhccccccccc-----
Confidence 999988643211 156788889999999999997 6 899999999999999999887765443211000
Q ss_pred hhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC-
Q psy14906 345 RKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC- 423 (583)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~- 423 (583)
.........+...+.+++|+|+
T Consensus 157 ---------------------------------------------------------~~~~~~~~~~~~~~~~~~~~p~~ 179 (351)
T 3f3f_A 157 ---------------------------------------------------------KVLSIPPANHLQSDFCLSWCPSR 179 (351)
T ss_dssp ---------------------------------------------------------ESCSCCCSSCSCCCEEEEECCCS
T ss_pred ---------------------------------------------------------cccccccCCcccceeEEEeccCC
Confidence 0000011122367999999997
Q ss_pred --CcEEEEEecCceEEEEEcccCcc--ccccCCCCCCCcccCeeEEEEeCCC----cEEEEeecCCcEEEEEccCCCCCc
Q psy14906 424 --GNFVLIGYSSGHVDRFNIQSGAH--RGSYGHDNQPGHVGGVRGVVSDNLN----QIVISGGNDQTVKVWHFKQTGKPP 495 (583)
Q Consensus 424 --~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~h~~~v~~~~~s~~~----~~l~s~~~dg~i~iwd~~~~~~~~ 495 (583)
+.++++++.++.+.+|+...+.. ...+ .+|...|++++|+|++ ++|++++.||.|++||+... ..
T Consensus 180 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~--~~ 252 (351)
T 3f3f_A 180 FSPEKLAVSALEQAIIYQRGKDGKLHVAAKL-----PGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK--LS 252 (351)
T ss_dssp SSCCEEEEEETTEEEEEEECTTSCEEEEEEC-----CCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC--C-
T ss_pred CCCcEEEEecCCCcEEEEccCCCceeeeeec-----CCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC--cC
Confidence 89999999999998888877765 4444 6899999999999998 89999999999999999876 33
Q ss_pred eEEe-eccCCeeeEEeccCCcEEEEE----eCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEE
Q psy14906 496 LRSI-KLDNGISFFRTHQESSMLAVC----LDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRV 570 (583)
Q Consensus 496 ~~~~-~~~~~v~~~~~s~~~~~l~~~----~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~v 570 (583)
.... ...........++....++.+ .....+.+|+....+.+..+.+|...|++++|+|++++|++++.||.|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~i 332 (351)
T 3f3f_A 253 PLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRL 332 (351)
T ss_dssp --------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEE
T ss_pred ccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEE
Confidence 2222 222233344444444444443 34456777888888899999999999999999999999999999999999
Q ss_pred EeCCCccccccc
Q psy14906 571 WDIPSSQLIDCF 582 (583)
Q Consensus 571 w~~~~~~~~~~~ 582 (583)
|++.+++.++.+
T Consensus 333 w~~~~~~~~~~~ 344 (351)
T 3f3f_A 333 WKATYSNEFKCM 344 (351)
T ss_dssp EEECTTSCEEEE
T ss_pred EecCcCcchhhe
Confidence 999998766544
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=296.47 Aligned_cols=279 Identities=24% Similarity=0.390 Sum_probs=221.0
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
.|...|.++++ ++++|++|+.||.|++||+.+++.+..+.+|...|.+++| +++ +|++|+.||.|++||+.+++.
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~-~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DER-VIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEESSSCCE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCC-EEEEEcCCCeEEEEECCCCcE
Confidence 56778988887 7999999999999999999999999999999999999999 666 899999999999999999999
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
+..+ .+|...|.+++|+ +.++++++.|+.|++||+.... .......+.+|...|.+++| +++++++++.||.|
T Consensus 206 ~~~~-~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~i 278 (435)
T 1p22_A 206 LNTL-IHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPT-DITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTI 278 (435)
T ss_dssp EEEE-CCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSS-CCEEEEEECCCSSCEEEEEE---ETTEEEEEETTSEE
T ss_pred EEEE-cCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCC-CceeeeEecCCCCcEEEEEe---CCCEEEEEeCCCeE
Confidence 9888 7899999999996 4589999999999999775432 22333667788888888887 46688888888888
Q ss_pred EEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 320 RIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 320 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
++||+.+++..
T Consensus 279 ~vwd~~~~~~~--------------------------------------------------------------------- 289 (435)
T 1p22_A 279 KVWNTSTCEFV--------------------------------------------------------------------- 289 (435)
T ss_dssp EEEETTTCCEE---------------------------------------------------------------------
T ss_pred EEEECCcCcEE---------------------------------------------------------------------
Confidence 88887654321
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN 479 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 479 (583)
..+ .+|...|.++++ +++++++++.
T Consensus 290 ------------------------------------------------~~~-----~~~~~~v~~~~~--~~~~l~~g~~ 314 (435)
T 1p22_A 290 ------------------------------------------------RTL-----NGHKRGIACLQY--RDRLVVSGSS 314 (435)
T ss_dssp ------------------------------------------------EEE-----ECCSSCEEEEEE--ETTEEEEEET
T ss_pred ------------------------------------------------EEE-----cCCCCcEEEEEe--CCCEEEEEeC
Confidence 122 356666777777 3567777777
Q ss_pred CCcEEEEEccCCCCCceEEee-ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccc---------eEEeecccccceee
Q psy14906 480 DQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT---------IIRKLSGHMGQLTD 549 (583)
Q Consensus 480 dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~---------~~~~~~~h~~~v~~ 549 (583)
||.|++||+.++ +++..+. +...+.+++| ++++|++|+.||.|++||+.+++ .+..+.+|.+.|.+
T Consensus 315 dg~i~iwd~~~~--~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 390 (435)
T 1p22_A 315 DNTIRLWDIECG--ACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 390 (435)
T ss_dssp TSCEEEEETTTC--CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCC
T ss_pred CCeEEEEECCCC--CEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEE
Confidence 788888887776 6666665 3456777777 67778888888888888877665 77888999999999
Q ss_pred EEecCCCcEEEEEeCCCeEEEEeCCCccccc
Q psy14906 550 ADFSPDSRWLITASMDCTIRVWDIPSSQLID 580 (583)
Q Consensus 550 l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~ 580 (583)
++| ++++|++++.||+|++||+.++....
T Consensus 391 l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 391 LQF--DEFQIVSSSHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp EEE--CSSCEEECCSSSEEEEEC--------
T ss_pred EEe--CCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 999 78899999999999999998876543
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=279.66 Aligned_cols=253 Identities=16% Similarity=0.175 Sum_probs=206.8
Q ss_pred EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC--eehhhhhhccccceEEEEEecC--CCEEEEEeCCCeEE
Q psy14906 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR--QVENQIKKAHRKVVTGAHFLYN--EPLLVTSSPDNTLK 273 (583)
Q Consensus 198 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~i~ 273 (583)
..+.+|.+.|++++|+|+|+ +|++|+.|++|++||+..+ +++..+ .+|.+.|.+++|+++ +++|++++.|++|+
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~-~las~s~D~~v~iw~~~~~~~~~~~~l-~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGK-RMATCSSDKTIKIFEVEGETHKLIDTL-TGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp EECCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEEBCSSCBCCCEEE-CCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred eeccCCcCceEEEEECCCCC-EEEEEeCCCEEEEEecCCCCcEEEEEE-ccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 45678999999999999999 8999999999999999743 567777 799999999999863 89999999999999
Q ss_pred EEEccCCCCCceeeEEeccCCCCCeeEEEeeC-CCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcc
Q psy14906 274 LWIFDKADGNGRLLRIREGHSAPPNYIQFYGN-SSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKM 352 (583)
Q Consensus 274 ~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (583)
+||++. +....+..+.+|...|.+++|+|. ++.+|++++.|+.|++||++++......
T Consensus 81 iWd~~~--~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~------------------- 139 (297)
T 2pm7_B 81 IWKEEN--GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPI------------------- 139 (297)
T ss_dssp EEEBSS--SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCE-------------------
T ss_pred EEEcCC--CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeee-------------------
Confidence 997653 233456677889999999999983 2789999999999999998764311000
Q ss_pred ccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC---------
Q psy14906 353 NEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC--------- 423 (583)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--------- 423 (583)
....|...+.+++|+|+
T Consensus 140 ------------------------------------------------------~~~~h~~~v~~~~~~p~~~~~~~~~~ 165 (297)
T 2pm7_B 140 ------------------------------------------------------IIDAHAIGVNSASWAPATIEEDGEHN 165 (297)
T ss_dssp ------------------------------------------------------EEECCSSCEEEEEECCCC--------
T ss_pred ------------------------------------------------------eeecccCccceEeecCCcccccccCC
Confidence 00112256788888886
Q ss_pred ----CcEEEEEecCceEEEEEcccCc----cccccCCCCCCCcccCeeEEEEeCCC---cEEEEeecCCcEEEEEccCCC
Q psy14906 424 ----GNFVLIGYSSGHVDRFNIQSGA----HRGSYGHDNQPGHVGGVRGVVSDNLN---QIVISGGNDQTVKVWHFKQTG 492 (583)
Q Consensus 424 ----~~~l~~~~~dg~i~i~d~~~~~----~~~~~~~~~~~~h~~~v~~~~~s~~~---~~l~s~~~dg~i~iwd~~~~~ 492 (583)
+++|++|+.|+.|++||+.++. ....+ .+|...|.+++|+|++ ++|++++.|++|++||+....
T Consensus 166 ~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l-----~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~ 240 (297)
T 2pm7_B 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-----EGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQ 240 (297)
T ss_dssp ----CCEEEEEETTSCEEEEEEETTTTEEEEEEEE-----CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred CCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe-----cCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCC
Confidence 5799999999999999998776 44455 7899999999999984 899999999999999998752
Q ss_pred CCce-EEe---eccCCeeeEEeccCCcEEEEEeCCceEEEEEcc
Q psy14906 493 KPPL-RSI---KLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 493 ~~~~-~~~---~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 532 (583)
.... ..+ .+...+.+++|+|+|++||+++.|+.|++|+..
T Consensus 241 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 1222 222 345689999999999999999999999999976
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-36 Score=285.99 Aligned_cols=281 Identities=13% Similarity=0.119 Sum_probs=234.5
Q ss_pred EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe---ehhhhhhccccceEEEEEecCCC-EEEEEeCCCeEEEE
Q psy14906 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ---VENQIKKAHRKVVTGAHFLYNEP-LLVTSSPDNTLKLW 275 (583)
Q Consensus 200 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~w 275 (583)
..+|.+.|++++|+|+++ +|++++.|+.|++||+.+++ ....+ .+|...|.+++|+|+++ +|++++.|+.|++|
T Consensus 7 ~~~h~~~v~~~~~s~~~~-~l~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKS-LLLITSWDGSLTVYKFDIQAKNVDLLQS-LRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp SSCCSSCEEEEEEEGGGT-EEEEEETTSEEEEEEEETTTTEEEEEEE-EECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ccCCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEeCCCCccccceee-eecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 347889999999999998 89999999999999998776 23344 58999999999999999 99999999999999
Q ss_pred Ec-cCCCCCceeeEEecc--CCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccc---------cccceeeccchhhhhhh
Q psy14906 276 IF-DKADGNGRLLRIREG--HSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS---------ETSNKNLGIASANRNNL 343 (583)
Q Consensus 276 ~~-~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~~~~~ 343 (583)
++ +. . ....+.+ |...|.+++|+| +.++++++.|+.|++||+.+ ++....+.
T Consensus 85 d~~~~----~-~~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--------- 148 (342)
T 1yfq_A 85 DLIGS----P-SFQALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK--------- 148 (342)
T ss_dssp CSSSS----S-SEEECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS---------
T ss_pred EeccC----C-ceEeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe---------
Confidence 66 42 2 2367778 999999999996 88999999999999999876 32221110
Q ss_pred hhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC
Q psy14906 344 KRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC 423 (583)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 423 (583)
+...+.+++|+|+
T Consensus 149 -------------------------------------------------------------------~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 149 -------------------------------------------------------------------VKNKIFTMDTNSS 161 (342)
T ss_dssp -------------------------------------------------------------------SCCCEEEEEECSS
T ss_pred -------------------------------------------------------------------eCCceEEEEecCC
Confidence 2267899999998
Q ss_pred CcEEEEEecCceEEEEEccc-CccccccCCCCCCCcccCeeEEEEeC-CCcEEEEeecCCcEEEEEccCCC----CCceE
Q psy14906 424 GNFVLIGYSSGHVDRFNIQS-GAHRGSYGHDNQPGHVGGVRGVVSDN-LNQIVISGGNDQTVKVWHFKQTG----KPPLR 497 (583)
Q Consensus 424 ~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~----~~~~~ 497 (583)
+ +++++.++.|++||+.+ +........ ..|...+.+++|+| +++++++++.||.|++|+++... .+...
T Consensus 162 ~--l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~ 236 (342)
T 1yfq_A 162 R--LIVGMNNSQVQWFRLPLCEDDNGTIEE---SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF 236 (342)
T ss_dssp E--EEEEESTTEEEEEESSCCTTCCCEEEE---CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCE
T ss_pred c--EEEEeCCCeEEEEECCccccccceeee---cCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccce
Confidence 8 99999999999999988 543221111 47888999999999 99999999999999999997751 13444
Q ss_pred Eeecc----------CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeeccc-ccceeeEEecCCCcEEEEEeCCC
Q psy14906 498 SIKLD----------NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGH-MGQLTDADFSPDSRWLITASMDC 566 (583)
Q Consensus 498 ~~~~~----------~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h-~~~v~~l~~s~d~~~l~s~~~d~ 566 (583)
.+..+ ..|.+++|+|++++|++++.||.|++||+.+++.+..+.+| ...|.+++ |++++|++++.||
T Consensus 237 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 237 AFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp EEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECT
T ss_pred eeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCC
Confidence 44433 28999999999999999999999999999999999999998 99999999 9999999999999
Q ss_pred e-EEEEe
Q psy14906 567 T-IRVWD 572 (583)
Q Consensus 567 ~-i~vw~ 572 (583)
. .+.|.
T Consensus 315 ~~~~~~~ 321 (342)
T 1yfq_A 315 TFKTNAA 321 (342)
T ss_dssp HHHHCSS
T ss_pred ccccccc
Confidence 8 44443
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-36 Score=286.85 Aligned_cols=299 Identities=16% Similarity=0.157 Sum_probs=229.0
Q ss_pred eeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCC----cEEEEeeccCCceEEecccCCcceEEEeeCC--CCC
Q psy14906 104 VGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAE----ETYLELSFDNDTFKIMGKRWNSCVNVLEPSP--VVD 175 (583)
Q Consensus 104 ~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~ 175 (583)
...+.+|.+.|+++ +|++++||+++.||.|++||+.++ +....+. +|...|.+++|+| +++
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~d~~ 72 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWR-----------AHDSSIVAIDWASPEYGR 72 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEE-----------CCSSCEEEEEECCGGGCS
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceec-----------cCCCcEEEEEEcCCCCCC
Confidence 35678999999998 899999999999999999999976 3555565 8999999999999 699
Q ss_pred EEEEEecCCeEEEEEccCC---------ceeEEEeccCCCeEEEEEecC--CCCEEEEEcCCCcEEEEeCCCCeehhhhh
Q psy14906 176 IIGVGLSNKKIILHNILTD---------ESLMEFIQTWGPVTALSFRTD--GPPMMVSGSNTGHLTVWNLEDRQVENQIK 244 (583)
Q Consensus 176 ~l~~~~~d~~i~iw~~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 244 (583)
+|++++.||.|++||+.++ +.+..+..|...|.+++|+|+ +. ++++++.||.|++||+.+++.+..+.
T Consensus 73 ~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~ 151 (351)
T 3f3f_A 73 IIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGL-KLACLGNDGILRLYDALEPSDLRSWT 151 (351)
T ss_dssp EEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTCEEEEEECSSTTCTTCCE
T ss_pred EEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCc-EEEEecCCCcEEEecCCChHHhcccc
Confidence 9999999999999999887 557788899999999999999 88 89999999999999999887666542
Q ss_pred ------------hccccceEEEEEecC---CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCC--
Q psy14906 245 ------------KAHRKVVTGAHFLYN---EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSS-- 307 (583)
Q Consensus 245 ------------~~~~~~v~~~~~~~~---~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-- 307 (583)
..|...+.+++|+|+ +.++++++.++.+.+|+. .......+..+.+|...|.+++|+| ++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~h~~~i~~~~~~p-~~~~ 228 (351)
T 3f3f_A 152 LTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRG--KDGKLHVAAKLPGHKSLIRSISWAP-SIGR 228 (351)
T ss_dssp EEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEEC--TTSCEEEEEECCCCCSCEEEEEECC-CSSC
T ss_pred ccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEcc--CCCceeeeeecCCCCcceeEEEECC-CCCC
Confidence 267889999999997 899999999999977744 3334456788889999999999998 55
Q ss_pred --CEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCc
Q psy14906 308 --DNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKN 385 (583)
Q Consensus 308 --~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (583)
++|++++.||.|++||+..+..........
T Consensus 229 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------------------------------------------ 260 (351)
T 3f3f_A 229 WYQLIATGCKDGRIRIFKITEKLSPLASEESL------------------------------------------------ 260 (351)
T ss_dssp SSEEEEEEETTSCEEEEEEEECC---------------------------------------------------------
T ss_pred cceEEEEEcCCCeEEEEeCCCCcCccccCCcc------------------------------------------------
Confidence 799999999999999998764322110000
Q ss_pred eEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEE----EEEecCceEEEEEcccCccccccCCCCCCCcccC
Q psy14906 386 KVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFV----LIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG 461 (583)
Q Consensus 386 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l----~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~ 461 (583)
........++....+ ..+.....+.+|+....+.+..+ .+|...
T Consensus 261 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~h~~~ 308 (351)
T 3f3f_A 261 ---------------------------TNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEH-----DDHNGE 308 (351)
T ss_dssp ---------------------------------------------------------CCSEEEEEEEEE-----CTTSSC
T ss_pred ---------------------------cceeccCCCcccccccccccccccceeeeecccccccEEEEE-----eccccc
Confidence 011111111222222 22233445666666667777777 789999
Q ss_pred eeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEe
Q psy14906 462 VRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI 499 (583)
Q Consensus 462 v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 499 (583)
|++++|+|++++|++++.||.|++|++.++ .....+
T Consensus 309 v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~--~~~~~~ 344 (351)
T 3f3f_A 309 VWSVSWNLTGTILSSAGDDGKVRLWKATYS--NEFKCM 344 (351)
T ss_dssp EEEEEECSSSCCEEEEETTSCEEEEEECTT--SCEEEE
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEecCcC--cchhhe
Confidence 999999999999999999999999999987 544433
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=300.98 Aligned_cols=263 Identities=11% Similarity=0.065 Sum_probs=204.0
Q ss_pred CcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeCeEEEEEcCCeEEEEeccceeeeeeccc
Q psy14906 31 HLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGH 110 (583)
Q Consensus 31 ~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~h 110 (583)
.-...++|+|||+. +++++.|++|+ |.+.+ ..+.+|...|.+++|.|.- .++.+.+|+.++.....+ .|
T Consensus 16 ~~v~sv~~SpDG~~-iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg----~~~~~~~~~~~~~~~~~~-~~ 84 (588)
T 2j04_A 16 DWKNNLTWARDGTL-YLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE----FENKLDFELAQQNGLLNS-QP 84 (588)
T ss_dssp SSSCCEEECTTSCE-EEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC----CCCTTTTSCCCSSCSSTT-SC
T ss_pred ccEEEEEECCCCCE-EEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC----CcceEEEEeCCCceEeec-CC
Confidence 34578999998766 34455899999 75555 4457999999999985422 566666666554443333 55
Q ss_pred CccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEE
Q psy14906 111 TSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIIL 188 (583)
Q Consensus 111 ~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~i 188 (583)
...|.++ ||+|++||+++.||.|++||.++ ++..+. +... -....+.+++|||||++||+|+.||+|++
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~------~~~~sv~svafSPDG~~LAsgs~DGtVkI 155 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGN------LSSRTYHCFEWNPIESSIVVGNEDGELQF 155 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSC------STTTCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCc------cccccEEEEEEcCCCCEEEEEcCCCEEEE
Confidence 8889987 99999999999999999999554 444442 1000 01236999999999999999999999999
Q ss_pred EEccCCce-------eEEE----eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeeh---hhhhhccccceEEE
Q psy14906 189 HNILTDES-------LMEF----IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE---NQIKKAHRKVVTGA 254 (583)
Q Consensus 189 w~~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~---~~~~~~~~~~v~~~ 254 (583)
||+.+++. +.++ .+|...|.+++|+||| +++++.|++|++||+.+++.. .++..+|...|.++
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sv 232 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDL 232 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCE
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEE
Confidence 99998753 5666 5677899999999998 678888999999999887742 34424788999999
Q ss_pred EEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEE--eeCCCCEEEEeeCCCcEEEEEcc
Q psy14906 255 HFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQF--YGNSSDNILSAAGDSTLRIFNTK 325 (583)
Q Consensus 255 ~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~i~iwd~~ 325 (583)
+|+ ++.||+++ ++.|++|++. ..+......+|...+..++| +| ++..+++++.||+ ++|...
T Consensus 233 aFs--g~~LASa~-~~tIkLWd~~----~~~~~~~~~gh~~~V~~va~~~s~-d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 233 KIV--DYKVVLTC-PGYVHKIDLK----NYSISSLKTGSLENFHIIPLNHEK-ESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEE--TTEEEEEC-SSEEEEEETT----TTEEEEEECSCCSCCCEEEETTCS-SCEEEEECSSCEE-EEEESS
T ss_pred EEE--CCEEEEEe-CCeEEEEECC----CCeEEEEEcCCCceEEEEEeeeCC-CCCEEEEEcCCCC-EEEeec
Confidence 999 68899887 6999999764 33442333389999999999 87 8899999999999 999864
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=290.55 Aligned_cols=296 Identities=15% Similarity=0.154 Sum_probs=236.9
Q ss_pred EEccCCceeEEEeccCCCeEEEEEecC---CCCEEEEEcCCCcEEEEeCCC-Ceeh-hhhhhccccceEEEEEecCCCEE
Q psy14906 189 HNILTDESLMEFIQTWGPVTALSFRTD---GPPMMVSGSNTGHLTVWNLED-RQVE-NQIKKAHRKVVTGAHFLYNEPLL 263 (583)
Q Consensus 189 w~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~s~~~dg~i~vwd~~~-~~~~-~~~~~~~~~~v~~~~~~~~~~~l 263 (583)
++....+.+..+.+|.+.|++++|+|+ |+ +|++|+.||.|++||+.+ ++.+ ..+ .+|...|.+++|+|++++|
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~-~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l 101 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGN-FLIAGSWANDVRCWEVQDSGQTIPKAQ-QMHTGPVLDVCWSDDGSKV 101 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSE-EEEEEETTSEEEEEEECTTSCEEEEEE-EECSSCEEEEEECTTSSEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCce-EEEEECCCCcEEEEEcCCCCceeEEEe-ccccCCEEEEEECcCCCEE
Confidence 345566777888899999999999999 47 899999999999999997 5554 555 7899999999999999999
Q ss_pred EEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEE--eeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhh
Q psy14906 264 VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQF--YGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341 (583)
Q Consensus 264 ~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 341 (583)
++++.|+.|++|+++ ..+.. ....|...|.+++| +| ++.+|++++.||.|++||+++++....+...
T Consensus 102 ~s~~~dg~v~iwd~~----~~~~~-~~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~----- 170 (368)
T 3mmy_A 102 FTASCDKTAKMWDLS----SNQAI-QIAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP----- 170 (368)
T ss_dssp EEEETTSEEEEEETT----TTEEE-EEEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECS-----
T ss_pred EEEcCCCcEEEEEcC----CCCce-eeccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecC-----
Confidence 999999999999775 33433 35679999999999 65 7889999999999999999887665443111
Q ss_pred hhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEc
Q psy14906 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYIT 421 (583)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 421 (583)
..+.++.+
T Consensus 171 -----------------------------------------------------------------------~~~~~~~~- 178 (368)
T 3mmy_A 171 -----------------------------------------------------------------------ERCYCADV- 178 (368)
T ss_dssp -----------------------------------------------------------------------SCEEEEEE-
T ss_pred -----------------------------------------------------------------------CCceEEEe-
Confidence 22333333
Q ss_pred cCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcE----EEEeecCCcEEEEEccCCCC-Cce
Q psy14906 422 HCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQI----VISGGNDQTVKVWHFKQTGK-PPL 496 (583)
Q Consensus 422 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~----l~s~~~dg~i~iwd~~~~~~-~~~ 496 (583)
....+++++.++.+.+|++........... ..+...+.++.+.++... +++++.||.|++|++..... ...
T Consensus 179 -~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~ 254 (368)
T 3mmy_A 179 -IYPMAVVATAERGLIVYQLENQPSEFRRIE---SPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDN 254 (368)
T ss_dssp -ETTEEEEEEGGGCEEEEECSSSCEEEEECC---CSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHS
T ss_pred -cCCeeEEEeCCCcEEEEEeccccchhhhcc---ccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccc
Confidence 355888899999999999987654433321 244555666766665544 99999999999999987621 223
Q ss_pred EEeeccC-------------CeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEe
Q psy14906 497 RSIKLDN-------------GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 497 ~~~~~~~-------------~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~ 563 (583)
..+..+. .|.+++|+|++++|++++.||.|++||+.+++++..+.+|...|++++|+||+++|++++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 255 FTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp EEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEE
T ss_pred eeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEe
Confidence 3444332 699999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeC
Q psy14906 564 MDCTIRVWDI 573 (583)
Q Consensus 564 ~d~~i~vw~~ 573 (583)
.|+..+.|++
T Consensus 335 ~d~~~~~~~~ 344 (368)
T 3mmy_A 335 SYDWSKGHEF 344 (368)
T ss_dssp CCCSTTCGGG
T ss_pred cccccccccc
Confidence 9875555444
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-36 Score=294.78 Aligned_cols=304 Identities=13% Similarity=0.131 Sum_probs=229.4
Q ss_pred ccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCc-----------EEEEeeccCCceEEecccCC------------c
Q psy14906 109 GHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEE-----------TYLELSFDNDTFKIMGKRWN------------S 163 (583)
Q Consensus 109 ~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~~~~~~~~~~~~------------~ 163 (583)
.|.+.|+++ +|+|++||+|+.||.|+|||+.+++ ....+. +|. .
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-----------~h~~~~~~~~~~~~~~ 94 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQ-----------SHEPEFDYLKSLEIEE 94 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEE-----------CCCCEEEGGGTEEECC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccc-----------cccccccccccccccC
Confidence 467899987 9999999999999999999999877 456665 787 8
Q ss_pred ceEEEeeCCCC--CEEEEEecCCeEEEEEccCCcee---------------------------------------EE-Ee
Q psy14906 164 CVNVLEPSPVV--DIIGVGLSNKKIILHNILTDESL---------------------------------------ME-FI 201 (583)
Q Consensus 164 ~i~~~~~s~~~--~~l~~~~~d~~i~iw~~~~~~~~---------------------------------------~~-~~ 201 (583)
.|.+++|+|++ .+|++++.|+.|++||+.+++.. .. ..
T Consensus 95 ~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (447)
T 3dw8_B 95 KINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFAN 174 (447)
T ss_dssp CCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECS
T ss_pred ceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEecc
Confidence 89999999998 89999999999999999865432 12 35
Q ss_pred ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC-Ceehh-------hhhhccccceEEEEEecCC-CEEEEEeCCCeE
Q psy14906 202 QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED-RQVEN-------QIKKAHRKVVTGAHFLYNE-PLLVTSSPDNTL 272 (583)
Q Consensus 202 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~-------~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i 272 (583)
+|...|.+++|+|+++ +|++| .|+.|++||+++ ++... .+ .+|...|.+++|+|++ ++|++++.|+.|
T Consensus 175 ~h~~~v~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 175 AHTYHINSISINSDYE-TYLSA-DDLRINLWHLEITDRSFNIVDIKPANM-EELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CCSSCCCEEEECTTSS-EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSG-GGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred CCCcceEEEEEcCCCC-EEEEe-CCCeEEEEECCCCCceeeeeecccccc-cccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 7889999999999998 88888 799999999984 44333 34 6899999999999998 999999999999
Q ss_pred EEEEccCCCCCceeeEEeccCCC------------CCeeEEEeeCCCCEEEEeeCCCcEEEEEccc-cccceeeccchhh
Q psy14906 273 KLWIFDKADGNGRLLRIREGHSA------------PPNYIQFYGNSSDNILSAAGDSTLRIFNTKS-ETSNKNLGIASAN 339 (583)
Q Consensus 273 ~~w~~~~~~~~~~~~~~~~~~~~------------~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~ 339 (583)
++||+............+.+|.. .|.+++|+| ++++|++++. +.|++||+.. ++....+......
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~ 329 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYL 329 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGG
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccccceeeccccc
Confidence 99987643211122567777775 899999998 8999999999 9999999986 5554443211100
Q ss_pred hhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEE
Q psy14906 340 RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVY 419 (583)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 419 (583)
..... .......-..+..++
T Consensus 330 ~~~l~------------------------------------------------------------~~~~~~~i~~~~~~~ 349 (447)
T 3dw8_B 330 RSKLC------------------------------------------------------------SLYENDCIFDKFECC 349 (447)
T ss_dssp TTTHH------------------------------------------------------------HHHHTSGGGCCCCEE
T ss_pred ccccc------------------------------------------------------------ccccccccccceEEE
Confidence 00000 000000001244599
Q ss_pred EccCCcEEEEEecCceEEEEEcccCccccccCCC---------------------------CCCCcccCeeEEEEeCCCc
Q psy14906 420 ITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHD---------------------------NQPGHVGGVRGVVSDNLNQ 472 (583)
Q Consensus 420 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---------------------------~~~~h~~~v~~~~~s~~~~ 472 (583)
|+|++++|++|+.||.|++||+.+++........ ....+...|..++|+|+++
T Consensus 350 ~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~ 429 (447)
T 3dw8_B 350 WNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKEN 429 (447)
T ss_dssp ECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSS
T ss_pred ECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCC
Confidence 9999999999999999999999988764311000 0013456799999999999
Q ss_pred EEEEeecCCcEEEEEcc
Q psy14906 473 IVISGGNDQTVKVWHFK 489 (583)
Q Consensus 473 ~l~s~~~dg~i~iwd~~ 489 (583)
+||+++.++ +++|..+
T Consensus 430 ~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 430 IIAVATTNN-LYIFQDK 445 (447)
T ss_dssp EEEEECSSC-EEEEECC
T ss_pred EEEEEecce-eeeeccc
Confidence 999998875 8888643
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-35 Score=313.74 Aligned_cols=433 Identities=10% Similarity=-0.004 Sum_probs=324.0
Q ss_pred eeeeecCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eCeEEE-EEcC----C--eEE
Q psy14906 25 LGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DFFHIY-TSAN----N--IIY 95 (583)
Q Consensus 25 ~g~~~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~~~~~-~~~~----~--~i~ 95 (583)
-|.+........+|+| + .|++...+.|.+||+.+++.. .+.+|...+.+++| ||+.|+ ++.+ + .|+
T Consensus 9 ~g~~~~~~~~~~~~S~--~--~iaf~~~~~l~~~~~~gg~~~-~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~ 83 (1045)
T 1k32_A 9 HGLCMPNLLLNPDIHG--D--RIIFVCCDDLWEHDLKSGSTR-KIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLY 83 (1045)
T ss_dssp ----CCCCCEEEEEET--T--EEEEEETTEEEEEETTTCCEE-EEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEE
T ss_pred ccccccceEeCcEEeC--C--EEEEEECCcEEEEECCCCcEE-EeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEE
Confidence 3434455667778874 2 356666689999999887654 45679999999988 676554 4332 3 899
Q ss_pred EEeccceeeeeecccCccE-------EEE--ccCCCEEEEEeCC------CcEEEEEcCCCcEEEEeeccCCceEEeccc
Q psy14906 96 AWRRGIDIVGTYKGHTSPV-------HLI--LPFGPHLISVDEE------SNVKVWDIKAEETYLELSFDNDTFKIMGKR 160 (583)
Q Consensus 96 vw~~~~~~~~~~~~h~~~v-------~~i--s~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 160 (583)
+|+..+...+.+..|...+ ..+ +|||+.+++++.+ ..|.+|++.+++.. .+. .
T Consensus 84 ~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~-~l~-----------~ 151 (1045)
T 1k32_A 84 FYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFV-PLN-----------L 151 (1045)
T ss_dssp EEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEE-ECC-----------S
T ss_pred EEECCCCCeEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeE-Eec-----------C
Confidence 9998766678899999888 554 9999977777644 35888888877643 332 2
Q ss_pred CCcceEEEeeCCCCCEEEEEec------------CCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCc
Q psy14906 161 WNSCVNVLEPSPVVDIIGVGLS------------NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGH 228 (583)
Q Consensus 161 ~~~~i~~~~~s~~~~~l~~~~~------------d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~ 228 (583)
+ ....++|+| | ++++++. +....+|....+.....+.+|...+.++.|+++ . ++++++.++.
T Consensus 152 ~--~~~~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~-l~~~~~~dg~ 225 (1045)
T 1k32_A 152 G--PATHILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-R-IYFITDIDGF 225 (1045)
T ss_dssp C--SCSEEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-E-EEEEECTTSS
T ss_pred C--CcceeeeCC-C-EEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-E-EEEEEeccCc
Confidence 2 234577999 8 8888752 234566654444555667899999999999998 4 7888888999
Q ss_pred EEEEeCCC-CeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEecc-----------CCCC
Q psy14906 229 LTVWNLED-RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREG-----------HSAP 296 (583)
Q Consensus 229 i~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~-----------~~~~ 296 (583)
+.+|.+.. +.....+ ..|. .+...+|+|||+.|+.+. ++.|.+|++. ...+..+.+ |...
T Consensus 226 ~~l~~~~~~g~~~~~l-~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~-----~~~l~~l~~~~~~~~~~~~~~~~~ 297 (1045)
T 1k32_A 226 GQIYSTDLDGKDLRKH-TSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPD-----TEKIEKIEIGDLESPEDRIISIPS 297 (1045)
T ss_dssp CEEEEEETTSCSCEEC-CCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTT-----TCCEEECCCCCCCBCCSEEEECGG
T ss_pred eEEEEEeCCCCcceEe-cCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCC-----ceEeeeeccCcccccccccccccc
Confidence 99998653 3344444 3444 456779999999998884 8999999652 222334444 3446
Q ss_pred CeeEEEe-eCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccc
Q psy14906 297 PNYIQFY-GNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWN 375 (583)
Q Consensus 297 v~~~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (583)
+.+++|+ | ++++|++++ ++.+.+|++..+......
T Consensus 298 v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~~~~~~------------------------------------------ 333 (1045)
T 1k32_A 298 KFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTYVLKVP------------------------------------------ 333 (1045)
T ss_dssp GGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSBEEECS------------------------------------------
T ss_pred cceeeecCC-CCCEEEEEE-cCEEEEEcCCCCceEEcc------------------------------------------
Confidence 8999999 8 898888887 789999998765422110
Q ss_pred cEEEEecCCceEEEeecCcccccceeeecccccccCCC-CceEEEEccCCcEEEEEecCceEE-EEEcccCccccccCCC
Q psy14906 376 NIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQS-KPTCVYITHCGNFVLIGYSSGHVD-RFNIQSGAHRGSYGHD 453 (583)
Q Consensus 376 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~s~~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~ 453 (583)
.+.. .+..++|+ ||+.+++++.++.+. +|++.+++.. .+
T Consensus 334 ----------------------------------~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l--- 374 (1045)
T 1k32_A 334 ----------------------------------EPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KF--- 374 (1045)
T ss_dssp ----------------------------------CCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-EC---
T ss_pred ----------------------------------CCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-Ee---
Confidence 0012 57789999 999999988888899 9999876543 33
Q ss_pred CCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEe-eccCCeeeEEeccCCcEEEEEeCC---------
Q psy14906 454 NQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRTHQESSMLAVCLDD--------- 523 (583)
Q Consensus 454 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d--------- 523 (583)
..|...+..++|+|||++|++++.++.|++||+.++ +..... .+...+..++|||||++|++++.+
T Consensus 375 --~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg--~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~ 450 (1045)
T 1k32_A 375 --EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG--KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYV 450 (1045)
T ss_dssp --CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC--CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCC
T ss_pred --cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC--ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCC
Confidence 467788999999999999999999999999999988 666666 455678999999999999888764
Q ss_pred -ceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCc
Q psy14906 524 -FTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576 (583)
Q Consensus 524 -g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~ 576 (583)
+.|++||+.+++ +..+..|...+..++|+|||++|++++.++...+|+....
T Consensus 451 ~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 451 MQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp EEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred CCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcc
Confidence 499999999887 6677788888999999999999999999888888876543
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=291.72 Aligned_cols=261 Identities=16% Similarity=0.200 Sum_probs=219.1
Q ss_pred eeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcC--CCcEEEEeeccCCceEEecccCCcceEEEeeCCC--CC
Q psy14906 102 DIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIK--AEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV--VD 175 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~ 175 (583)
+.+..+.+|.+.|+++ +|++++||+++.||.|++||+. +++.+..+. +|...|.+++|+++ ++
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----------~h~~~v~~~~~~~~~~~~ 70 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-----------GHEGPVWRVDWAHPKFGT 70 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-----------CCSSCEEEEEECCGGGCS
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec-----------CCCCcEEEEEeCCCCCCC
Confidence 4677899999999997 8999999999999999999998 456666666 89999999999987 99
Q ss_pred EEEEEecCCeEEEEEccCCc--eeEEEeccCCCeEEEEEecC--CCCEEEEEcCCCcEEEEeCCCCee--hhhhhhcccc
Q psy14906 176 IIGVGLSNKKIILHNILTDE--SLMEFIQTWGPVTALSFRTD--GPPMMVSGSNTGHLTVWNLEDRQV--ENQIKKAHRK 249 (583)
Q Consensus 176 ~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~ 249 (583)
+|++++.||.|++||+.+++ .+..+..|...|.+++|+|+ +. +|++++.|+.|++||+.++.. ...+ .+|..
T Consensus 71 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~-~~~~~ 148 (379)
T 3jrp_A 71 ILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSPIII-DAHAI 148 (379)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCCEEEE-ECCTT
T ss_pred EEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCceeeEEe-cCCCC
Confidence 99999999999999999987 77778889999999999999 77 899999999999999988743 2334 57899
Q ss_pred ceEEEEEec-------------CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC---CCEEEEe
Q psy14906 250 VVTGAHFLY-------------NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS---SDNILSA 313 (583)
Q Consensus 250 ~v~~~~~~~-------------~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~ 313 (583)
.|.+++|+| ++.+|++++.|+.|++||+............+.+|...|.+++|+| + +.+|+++
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~ 227 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP-TVLLRSYLASV 227 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC-CCSSSEEEEEE
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECC-CCCCCCeEEEE
Confidence 999999999 6999999999999999988755434456678889999999999998 6 8999999
Q ss_pred eCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecC
Q psy14906 314 AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFY 393 (583)
Q Consensus 314 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 393 (583)
+.||.|++||+.++....... +
T Consensus 228 ~~dg~i~iwd~~~~~~~~~~~------------------------------------------------------~---- 249 (379)
T 3jrp_A 228 SQDRTCIIWTQDNEQGPWKKT------------------------------------------------------L---- 249 (379)
T ss_dssp ETTSCEEEEEESSTTSCCEEE------------------------------------------------------E----
T ss_pred eCCCEEEEEeCCCCCccceee------------------------------------------------------e----
Confidence 999999999998754211100 0
Q ss_pred cccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcc
Q psy14906 394 KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446 (583)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 446 (583)
.....+...+.+++|+|++++|++++.||.|++|++..+..
T Consensus 250 ------------~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~ 290 (379)
T 3jrp_A 250 ------------LKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGK 290 (379)
T ss_dssp ------------SSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTE
T ss_pred ------------eccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCc
Confidence 00011226799999999999999999999999999986543
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=282.48 Aligned_cols=253 Identities=16% Similarity=0.181 Sum_probs=202.7
Q ss_pred eeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCc--EEEEeeccCCceEEecccCCcceEEEeeCC--CCCEEE
Q psy14906 105 GTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEE--TYLELSFDNDTFKIMGKRWNSCVNVLEPSP--VVDIIG 178 (583)
Q Consensus 105 ~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~ 178 (583)
..+.+|.+.|+++ +|+|++||+++.|++|+|||+.+++ .+..+. +|...|.+++|++ ++++|+
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~-----------gH~~~V~~v~~~~~~~~~~l~ 75 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLR-----------GHEGPVWQVAWAHPMYGNILA 75 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEE-----------CCSSCEEEEEECCGGGSSCEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEc-----------CCCccEEEEEeCCCCCCCEEE
Confidence 3567999999987 8999999999999999999999875 345665 9999999999986 489999
Q ss_pred EEecCCeEEEEEccCC--ceeEEEeccCCCeEEEEEecC--CCCEEEEEcCCCcEEEEeCCCCe---ehhhhhhccccce
Q psy14906 179 VGLSNKKIILHNILTD--ESLMEFIQTWGPVTALSFRTD--GPPMMVSGSNTGHLTVWNLEDRQ---VENQIKKAHRKVV 251 (583)
Q Consensus 179 ~~~~d~~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~~~~~~v 251 (583)
+|+.|++|++||++++ +.+..+.+|...|.+++|+|+ +. +|++|+.|+.|++||+..+. ....+ .+|...|
T Consensus 76 s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~~~~~~-~~h~~~v 153 (316)
T 3bg1_A 76 SCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWEVKKIN-NAHTIGC 153 (316)
T ss_dssp EEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEEECCBT-TSSSSCB
T ss_pred EEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcceeeee-ccccCCc
Confidence 9999999999999887 456678899999999999998 66 89999999999999998753 23444 6899999
Q ss_pred EEEEEecC-----------------CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC---CCEEE
Q psy14906 252 TGAHFLYN-----------------EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS---SDNIL 311 (583)
Q Consensus 252 ~~~~~~~~-----------------~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~ 311 (583)
.+++|+|+ +++|++++.|+.|++|+++.. .....+..+.+|...|.+++|+|.. +.+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~-~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~la 232 (316)
T 3bg1_A 154 NAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEED-GQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIA 232 (316)
T ss_dssp CCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTT-SCEEEEECCBCCSSCEEEEECCCCSSCSCCEEE
T ss_pred ceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCC-CccceeeecccCCCceEEEEecCCCCCCCceEE
Confidence 99999997 478999999999999987421 1235677889999999999999832 37899
Q ss_pred EeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEee
Q psy14906 312 SAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWS 391 (583)
Q Consensus 312 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 391 (583)
+++.|++|++|++.+.......
T Consensus 233 s~s~D~~v~iw~~~~~~~~~~~---------------------------------------------------------- 254 (316)
T 3bg1_A 233 SCSQDGRVFIWTCDDASSNTWS---------------------------------------------------------- 254 (316)
T ss_dssp EEETTCEEEEEECSSTTCCCCB----------------------------------------------------------
T ss_pred EEcCCCeEEEEEccCccccchh----------------------------------------------------------
Confidence 9999999999998753110000
Q ss_pred cCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcc
Q psy14906 392 FYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQ 442 (583)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~ 442 (583)
......+...+.+++|+|++++|++++.||.|++|+..
T Consensus 255 -------------~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 255 -------------PKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp -------------CCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred -------------hhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 00000112579999999999999999999999999975
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-36 Score=286.12 Aligned_cols=257 Identities=14% Similarity=0.147 Sum_probs=215.9
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEcc--CCceeEEEeccCCCeEEEEEecC--CCCEEEEEcCCCcEEEEeCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNIL--TDESLMEFIQTWGPVTALSFRTD--GPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~vwd~~ 235 (583)
+|...|.+++|+|++++||+|+.||.|++||+. +++.+..+.+|...|++++|+++ ++ +|++++.||.|++||+.
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~ 87 (379)
T 3jrp_A 9 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWKEE 87 (379)
T ss_dssp ECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSCEEEEEEE
T ss_pred CCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCC-EEEEeccCCEEEEEEcC
Confidence 899999999999999999999999999999998 66778889999999999999977 77 99999999999999999
Q ss_pred CCe--ehhhhhhccccceEEEEEecC--CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeC------
Q psy14906 236 DRQ--VENQIKKAHRKVVTGAHFLYN--EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGN------ 305 (583)
Q Consensus 236 ~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------ 305 (583)
+++ .+..+ ..|...|.+++|+|+ +++|++++.|+.|++|++... .......+..|...|.+++|+|.
T Consensus 88 ~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 88 NGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN--GTTSPIIIDAHAIGVNSASWAPATIEEDG 164 (379)
T ss_dssp TTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTT--SCCCEEEEECCTTCEEEEEECCCC-----
T ss_pred CCceeEeeee-cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCC--CceeeEEecCCCCceEEEEEcCccccccc
Confidence 886 56666 679999999999999 999999999999999977543 33445567789999999999984
Q ss_pred ------CCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEE
Q psy14906 306 ------SSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAA 379 (583)
Q Consensus 306 ------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (583)
++.++++++.||.|++||++++.....+.
T Consensus 165 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------------------------------------------- 199 (379)
T 3jrp_A 165 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE--------------------------------------------- 199 (379)
T ss_dssp -----CTTCEEEEEETTSCEEEEEEETTTTEEEEE---------------------------------------------
T ss_pred cccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeE---------------------------------------------
Confidence 58999999999999999998654321110
Q ss_pred EecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC---CcEEEEEecCceEEEEEcccCccccccCCCCCC
Q psy14906 380 IHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC---GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQP 456 (583)
Q Consensus 380 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 456 (583)
.....|...+.+++|+|+ ++++++++.||.|++||+.++............
T Consensus 200 --------------------------~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 253 (379)
T 3jrp_A 200 --------------------------STLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEE 253 (379)
T ss_dssp --------------------------EEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSS
T ss_pred --------------------------EEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccc
Confidence 001122367999999999 899999999999999999987522211111114
Q ss_pred CcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 457 ~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
.|...|.+++|+|++++|++++.||.|++|++...
T Consensus 254 ~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 254 KFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp CCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred cCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 68999999999999999999999999999999865
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=281.54 Aligned_cols=253 Identities=12% Similarity=0.125 Sum_probs=197.6
Q ss_pred EEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe--ehhhhhhccccceEEEEEec--CCCEEEEEeCCCeEEE
Q psy14906 199 EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ--VENQIKKAHRKVVTGAHFLY--NEPLLVTSSPDNTLKL 274 (583)
Q Consensus 199 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~i~~ 274 (583)
.+.+|.+.|++++|+|+++ +|++|+.|++|++||+.+++ ++..+ .+|.+.|.+++|++ ++++|++++.|++|++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~-~lasgs~D~~v~lwd~~~~~~~~~~~l-~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGT-RLATCSSDRSVKIFDVRNGGQILIADL-RGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp ------CCEEEEEECGGGC-EEEEEETTTEEEEEEEETTEEEEEEEE-ECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred ecccccCeEEEeeEcCCCC-EEEEEeCCCeEEEEEecCCCcEEEEEE-cCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 3568999999999999999 99999999999999998764 45666 79999999999986 4899999999999999
Q ss_pred EEccCCCCCceeeEEeccCCCCCeeEEEeeCC-CCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 275 WIFDKADGNGRLLRIREGHSAPPNYIQFYGNS-SDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 275 w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
||+. .+.......+.+|...|.+++|+|.+ +.+|++++.|++|++||+..+......
T Consensus 86 Wd~~--~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~-------------------- 143 (316)
T 3bg1_A 86 WREE--NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVK-------------------- 143 (316)
T ss_dssp ECCS--SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEEC--------------------
T ss_pred EECC--CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCccee--------------------
Confidence 9654 33335667788999999999999842 789999999999999998764321100
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC----------
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC---------- 423 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---------- 423 (583)
.....|...+.+++|+|+
T Consensus 144 ----------------------------------------------------~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 171 (316)
T 3bg1_A 144 ----------------------------------------------------KINNAHTIGCNAVSWAPAVVPGSLIDHP 171 (316)
T ss_dssp ----------------------------------------------------CBTTSSSSCBCCCEECCCCCC------C
T ss_pred ----------------------------------------------------eeeccccCCcceEEEccccCCccccccc
Confidence 000111134555555554
Q ss_pred -------CcEEEEEecCceEEEEEcccCc---cccccCCCCCCCcccCeeEEEEeCCC----cEEEEeecCCcEEEEEcc
Q psy14906 424 -------GNFVLIGYSSGHVDRFNIQSGA---HRGSYGHDNQPGHVGGVRGVVSDNLN----QIVISGGNDQTVKVWHFK 489 (583)
Q Consensus 424 -------~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~h~~~v~~~~~s~~~----~~l~s~~~dg~i~iwd~~ 489 (583)
+++|++|+.|+.|++||+..+. ....+ .+|...|.+++|+|++ ++|++++.|++|++|++.
T Consensus 172 ~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l-----~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~ 246 (316)
T 3bg1_A 172 SGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL-----EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCD 246 (316)
T ss_dssp CSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC-----BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECS
T ss_pred cccCccccceEEEecCCCeEEEEEeCCCCccceeeec-----ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEcc
Confidence 5789999999999999997552 44445 7899999999999986 789999999999999997
Q ss_pred CCCC-C-ce-EEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEcc
Q psy14906 490 QTGK-P-PL-RSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 490 ~~~~-~-~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 532 (583)
.... . .. ....+...|.+++|+|++++||+++.|+.|++|+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 247 DASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp STTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 6310 1 11 223456789999999999999999999999999975
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-35 Score=284.73 Aligned_cols=298 Identities=16% Similarity=0.170 Sum_probs=246.1
Q ss_pred eEEEEEccCC--ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehh-----hhhhccccceEEEEEe
Q psy14906 185 KIILHNILTD--ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN-----QIKKAHRKVVTGAHFL 257 (583)
Q Consensus 185 ~i~iw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-----~~~~~~~~~v~~~~~~ 257 (583)
.|..+|..++ +.+..+..+ ..+.+++|+|++. ++++++.++.|++||+.+++... .+ .+|...|.+++|+
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~-~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~-~~~~~~v~~~~~~ 178 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTR-LAIPLLEDEGMDVLDINSGQTVRLSPPEKY-KKKLGFVETISIP 178 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSE-EEEEBTTSSSEEEEETTTCCEEEECCCHHH-HTTCCEEEEEEEG
T ss_pred EEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCe-EEEEeCCCCeEEEEECCCCeEeeecCcccc-cccCCceeEEEEc
Confidence 4444555434 556666666 5677999999665 88888889999999999988766 45 6888999999999
Q ss_pred cCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEE-EeeCCCcEEEEEccccccceeeccc
Q psy14906 258 YNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL-SAAGDSTLRIFNTKSETSNKNLGIA 336 (583)
Q Consensus 258 ~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~ 336 (583)
++++++++++.|+.|++|+++ ..+.+..+..|...+.+++|+| +++.++ +++.|+.|++||+.+++....+..
T Consensus 179 ~~~~~~~s~~~d~~v~~~d~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~- 252 (433)
T 3bws_A 179 EHNELWVSQMQANAVHVFDLK----TLAYKATVDLTGKWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLEIRKTDK- 252 (433)
T ss_dssp GGTEEEEEEGGGTEEEEEETT----TCCEEEEEECSSSSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEECCC-
T ss_pred CCCEEEEEECCCCEEEEEECC----CceEEEEEcCCCCCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcEEEEecC-
Confidence 999999999999999999765 4566777778889999999997 677775 555799999999987654333211
Q ss_pred hhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCce
Q psy14906 337 SANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT 416 (583)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 416 (583)
...+.
T Consensus 253 ---------------------------------------------------------------------------~~~~~ 257 (433)
T 3bws_A 253 ---------------------------------------------------------------------------IGLPR 257 (433)
T ss_dssp ---------------------------------------------------------------------------CSEEE
T ss_pred ---------------------------------------------------------------------------CCCce
Confidence 03478
Q ss_pred EEEEccCCcEEEEEe--------cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcE-EEEeecCCcEEEEE
Q psy14906 417 CVYITHCGNFVLIGY--------SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQI-VISGGNDQTVKVWH 487 (583)
Q Consensus 417 ~~~~s~~~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~~~dg~i~iwd 487 (583)
+++++|+++++++++ .||.|++||+.+++....+ .|...+.+++|+|+++. +++++.|+.|++||
T Consensus 258 ~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~------~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d 331 (433)
T 3bws_A 258 GLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI------GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYD 331 (433)
T ss_dssp EEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE------EEEECEEEEEECSSTTEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec------cCCCCcceEEECCCCCEEEEEecCCCEEEEEE
Confidence 999999999999888 5889999999988877665 56778999999999974 56678999999999
Q ss_pred ccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeC---------------CceEEEEEccccceEEeecccccceeeEEe
Q psy14906 488 FKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLD---------------DFTVNIIDIDTCTIIRKLSGHMGQLTDADF 552 (583)
Q Consensus 488 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------------dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~ 552 (583)
+.++ +....+.+...+.+++|+|+|+++++++. ||.|++||+.+++.+..+.. ...+.+++|
T Consensus 332 ~~~~--~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~ 408 (433)
T 3bws_A 332 LKEK--KVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDV 408 (433)
T ss_dssp TTTT--EEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEE
T ss_pred CCCC--cEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEE
Confidence 9987 78888888889999999999999988876 57999999999999888876 457899999
Q ss_pred cCCCcEEEEEeC-CCeEEEEeCCC
Q psy14906 553 SPDSRWLITASM-DCTIRVWDIPS 575 (583)
Q Consensus 553 s~d~~~l~s~~~-d~~i~vw~~~~ 575 (583)
+||+++|++++. |+.|++|+++.
T Consensus 409 s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 409 SPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CTTSCEEEEEETTTTEEEEEEETT
T ss_pred cCCCCEEEEEECCCCeEEEEEecC
Confidence 999999988875 99999999863
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=279.52 Aligned_cols=292 Identities=10% Similarity=0.073 Sum_probs=239.9
Q ss_pred eeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCc---EEEEeeccCCceEEecccCCcceEEEeeCCCCC-EE
Q psy14906 104 VGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEE---TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD-II 177 (583)
Q Consensus 104 ~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l 177 (583)
.....+|.+.|+++ +|++++|++++.||.|++||+.+++ ....+. .|...|.+++|+|+++ +|
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~-----------~~~~~v~~~~~~~~~~~~l 72 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL-----------RYKHPLLCCNFIDNTDLQI 72 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE-----------ECSSCEEEEEEEESSSEEE
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee-----------ecCCceEEEEECCCCCcEE
Confidence 34456899999997 8999999999999999999999877 233343 7899999999999999 99
Q ss_pred EEEecCCeEEEEEc-cCCceeEEEec--cCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC---------Ceehhhhhh
Q psy14906 178 GVGLSNKKIILHNI-LTDESLMEFIQ--TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED---------RQVENQIKK 245 (583)
Q Consensus 178 ~~~~~d~~i~iw~~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~---------~~~~~~~~~ 245 (583)
++++.||.|++||+ .+++. ..+.. |...|.+++|+| +. ++++++.|+.|++||+++ ++++..+ .
T Consensus 73 ~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~ 148 (342)
T 1yfq_A 73 YVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT-K 148 (342)
T ss_dssp EEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS-S
T ss_pred EEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCeeeEE-e
Confidence 99999999999999 77654 67778 999999999999 77 899999999999999987 7777777 3
Q ss_pred ccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcc
Q psy14906 246 AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325 (583)
Q Consensus 246 ~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 325 (583)
|...|.+++|+|++ +++++.|+.|++|++... ...........|...+.+++|+|.+++++++++.||.+++|++.
T Consensus 149 -~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 149 -VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLC-EDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD 224 (342)
T ss_dssp -SCCCEEEEEECSSE--EEEEESTTEEEEEESSCC-TTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECC
T ss_pred -eCCceEEEEecCCc--EEEEeCCCeEEEEECCcc-ccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEc
Confidence 89999999999887 899999999999977531 12233445567888999999996258899999999999999997
Q ss_pred cc------ccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 326 SE------TSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 326 ~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
.. +....+.. ....
T Consensus 225 ~~~~~~~~~~~~~~~~---------------------------------------------------------~~~~--- 244 (342)
T 1yfq_A 225 DQGDDYNSSKRFAFRC---------------------------------------------------------HRLN--- 244 (342)
T ss_dssp TTCCSTTCTTCEEEEC---------------------------------------------------------CCCC---
T ss_pred CCCcccccccceeeec---------------------------------------------------------cccc---
Confidence 65 22221100 0000
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCc-ccCeeEEEEeCCCcEEEEee
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGH-VGGVRGVVSDNLNQIVISGG 478 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~ 478 (583)
.....+...+.+++|+|++++|++++.||.|++||+.+++.+..+ ..| ...|.+++ |++++|++++
T Consensus 245 ------~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~-----~~~h~~~v~~~~--~~~~~l~s~s 311 (342)
T 1yfq_A 245 ------LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNF-----AKFNEDSVVKIA--CSDNILCLAT 311 (342)
T ss_dssp ------TTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC-----CCCSSSEEEEEE--ECSSEEEEEE
T ss_pred ------ccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhh-----hcccCCCceEec--CCCCeEEEEe
Confidence 000012257999999999999999999999999999999988887 677 99999999 9999999999
Q ss_pred cCCc-EEEEE
Q psy14906 479 NDQT-VKVWH 487 (583)
Q Consensus 479 ~dg~-i~iwd 487 (583)
.||. .+.|.
T Consensus 312 ~Dg~~~~~~~ 321 (342)
T 1yfq_A 312 SDDTFKTNAA 321 (342)
T ss_dssp ECTHHHHCSS
T ss_pred cCCccccccc
Confidence 9998 55555
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-34 Score=274.47 Aligned_cols=334 Identities=12% Similarity=0.108 Sum_probs=258.3
Q ss_pred CEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEE-EEEecCCeEEEEEccCCceeEEE
Q psy14906 122 PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDII-GVGLSNKKIILHNILTDESLMEF 200 (583)
Q Consensus 122 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~ 200 (583)
..+++++.|+.|++||+.+++.+..+. .+ ..+.+++|+|++++| ++++.++.|++||+.+++.+..+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~-----------~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~ 70 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIP-----------VG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV 70 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE-----------CS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEee-----------cC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE
Confidence 357788899999999999999988886 44 458999999999987 66778999999999999999988
Q ss_pred eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEE-EEEeCCCeEEEEEccC
Q psy14906 201 IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLL-VTSSPDNTLKLWIFDK 279 (583)
Q Consensus 201 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~i~~w~~~~ 279 (583)
..+ ..+.+++|+|++++++++++.++.|++||+.+++.+..+ . +...+.+++|+|+++.| ++++.++.|++||+.
T Consensus 71 ~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~-~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~- 146 (391)
T 1l0q_A 71 PAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV-K-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTV- 146 (391)
T ss_dssp ECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-E-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETT-
T ss_pred ECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE-e-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECC-
Confidence 877 599999999999955567777899999999999888777 3 45578999999999977 678889999999765
Q ss_pred CCCCceeeEEeccCCCCCeeEEEeeCCCCEE-EEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCC
Q psy14906 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNI-LSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFIL 358 (583)
Q Consensus 280 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (583)
.++.+..+..+ ..+..++|+| +++.+ ++++.++.|++||+.+++....+..
T Consensus 147 ---~~~~~~~~~~~-~~~~~~~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~----------------------- 198 (391)
T 1l0q_A 147 ---TKAVINTVSVG-RSPKGIAVTP-DGTKVYVANFDSMSISVIDTVTNSVIDTVKV----------------------- 198 (391)
T ss_dssp ---TTEEEEEEECC-SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEEC-----------------------
T ss_pred ---CCcEEEEEecC-CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCeEEEEEec-----------------------
Confidence 45666666655 4568999997 67776 6778899999999987654332210
Q ss_pred CccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe---cCce
Q psy14906 359 PPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY---SSGH 435 (583)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~ 435 (583)
...+.+++|+|+++++++++ .++.
T Consensus 199 -----------------------------------------------------~~~~~~~~~~~~g~~l~~~~~~~~~~~ 225 (391)
T 1l0q_A 199 -----------------------------------------------------EAAPSGIAVNPEGTKAYVTNVDKYFNT 225 (391)
T ss_dssp -----------------------------------------------------SSEEEEEEECTTSSEEEEEEECSSCCE
T ss_pred -----------------------------------------------------CCCccceEECCCCCEEEEEecCcCCCc
Confidence 13578899999999999888 6899
Q ss_pred EEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEE-EEeecCCcEEEEEccCCCCCceEEeeccCCee----eEE-
Q psy14906 436 VDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIV-ISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS----FFR- 509 (583)
Q Consensus 436 i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~----~~~- 509 (583)
|++||+.+++....+ ..| ..+.+++|+|++++| ++++.|+.|++||+.++ +.+..+..+.... .+.
T Consensus 226 v~~~d~~~~~~~~~~-----~~~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~ 297 (391)
T 1l0q_A 226 VSMIDTGTNKITARI-----PVG-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATN--TITATMAVGKNPYASGQFIGS 297 (391)
T ss_dssp EEEEETTTTEEEEEE-----ECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--EEEEEEECSSSEECCSSCEEE
T ss_pred EEEEECCCCeEEEEE-----ecC-CCccEEEEccCCCEEEEEcCCCCEEEEEECCCC--cEEEEEECCcCCCccceeeec
Confidence 999999999887776 344 357899999999877 67788999999999987 6666665432211 122
Q ss_pred -----------eccCC----------cEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEE---eCC
Q psy14906 510 -----------THQES----------SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITA---SMD 565 (583)
Q Consensus 510 -----------~s~~~----------~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~---~~d 565 (583)
|+.+. ..+...+.|...++||+.++... .+.. ....|+++|.|.++. +.|
T Consensus 298 ~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~~----~~~~--~~~~~~~~g~y~~~~~~~~~~ 371 (391)
T 1l0q_A 298 IPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSS----KKQN--PTHTYSETGIYTVRLTVSNSN 371 (391)
T ss_dssp CSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCEE----CSSS--CEECCSSCEEEEEEEEEEETT
T ss_pred ccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCccc----CcCC--CeEEeCCCceEEEEEEEECCC
Confidence 22221 23555566888999999887642 1222 235799999987754 355
Q ss_pred C
Q psy14906 566 C 566 (583)
Q Consensus 566 ~ 566 (583)
|
T Consensus 372 g 372 (391)
T 1l0q_A 372 G 372 (391)
T ss_dssp E
T ss_pred C
Confidence 5
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-36 Score=289.27 Aligned_cols=293 Identities=14% Similarity=0.187 Sum_probs=234.1
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe----ehhhhhhccccceEEEEEec-CCCEEEEEeCCCeEEEEEccCC
Q psy14906 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ----VENQIKKAHRKVVTGAHFLY-NEPLLVTSSPDNTLKLWIFDKA 280 (583)
Q Consensus 206 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~w~~~~~ 280 (583)
....++++|+...++++++.||.|++|++.... ....+ .+|.+.|.+++|+| ++++|++++.|+.|++|++...
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLV-CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCB-CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceE-ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 345688888876455568889999999996642 23344 68999999999999 9999999999999999977643
Q ss_pred CCC---ceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccC
Q psy14906 281 DGN---GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFI 357 (583)
Q Consensus 281 ~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (583)
... ...+..+.+|...|.+++|+|....+|++++.||.|++||+.+++....+.
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----------------------- 171 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG----------------------- 171 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC-----------------------
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe-----------------------
Confidence 111 155778889999999999998333799999999999999998876543321
Q ss_pred CCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEE
Q psy14906 358 LPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVD 437 (583)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 437 (583)
...+...+.+++|+|++++|++++.||.|+
T Consensus 172 --------------------------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 201 (402)
T 2aq5_A 172 --------------------------------------------------PDVHPDTIYSVDWSRDGALICTSCRDKRVR 201 (402)
T ss_dssp --------------------------------------------------TTTCCSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred --------------------------------------------------cCCCCCceEEEEECCCCCEEEEEecCCcEE
Confidence 011226799999999999999999999999
Q ss_pred EEEcccCccccccCCCCCCCcccC-eeEEEEeCCCcEEEEe---ecCCcEEEEEccCCCCCc-eEEeeccCCeeeEEecc
Q psy14906 438 RFNIQSGAHRGSYGHDNQPGHVGG-VRGVVSDNLNQIVISG---GNDQTVKVWHFKQTGKPP-LRSIKLDNGISFFRTHQ 512 (583)
Q Consensus 438 i~d~~~~~~~~~~~~~~~~~h~~~-v~~~~~s~~~~~l~s~---~~dg~i~iwd~~~~~~~~-~~~~~~~~~v~~~~~s~ 512 (583)
+||+.+++....+. ..|.+. +.+++|+|++++|+++ +.|+.|++||+.+..... ...+.+...+.+++|+|
T Consensus 202 iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 277 (402)
T 2aq5_A 202 VIEPRKGTVVAEKD----RPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDP 277 (402)
T ss_dssp EEETTTTEEEEEEE----CSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEET
T ss_pred EEeCCCCceeeeec----cCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcC
Confidence 99999988877762 256665 8999999999999999 799999999999873211 23345667899999999
Q ss_pred CCcEEEE-EeCCceEEEEEccccce-EEeecc--cccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccc
Q psy14906 513 ESSMLAV-CLDDFTVNIIDIDTCTI-IRKLSG--HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578 (583)
Q Consensus 513 ~~~~l~~-~~~dg~i~i~d~~~~~~-~~~~~~--h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~ 578 (583)
++++|++ ++.|+.|++||+.+++. +..+.. |...|.+++|+|++.++++ .|+.+++|++.++++
T Consensus 278 ~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 278 DTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp TTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred CCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 9999875 55799999999998874 444444 5589999999999998874 567999999988654
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=276.01 Aligned_cols=311 Identities=12% Similarity=0.112 Sum_probs=250.3
Q ss_pred CEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEE
Q psy14906 175 DIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGA 254 (583)
Q Consensus 175 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~ 254 (583)
.++++++.|+.|++||+.+++.+..+..| ..+.+++|+|+++.++++++.|+.|++||+.+++.+..+ .. ...+.++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~-~~-~~~v~~~ 79 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV-PA-GSSPQGV 79 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE-EC-SSSEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE-EC-CCCccce
Confidence 46788889999999999999999999888 569999999999855578889999999999999988887 33 3499999
Q ss_pred EEecCCCEEEEE-eCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEE-EEeeCCCcEEEEEcccccccee
Q psy14906 255 HFLYNEPLLVTS-SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNI-LSAAGDSTLRIFNTKSETSNKN 332 (583)
Q Consensus 255 ~~~~~~~~l~s~-~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~ 332 (583)
+|+|++++|+.+ +.++.|++||+. ..+.+..+..+ ..+.+++|+| +++.+ ++++.++.|++||+.+++....
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~----~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTT----SNTVAGTVKTG-KSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETT----TTEEEEEEECS-SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EECCCCCEEEEEECCCCEEEEEECC----CCeEEEEEeCC-CCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 999999987654 467999999765 44556666544 4679999997 77766 6888899999999987755433
Q ss_pred eccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCC
Q psy14906 333 LGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQ 412 (583)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (583)
+.. .
T Consensus 154 ~~~----------------------------------------------------------------------------~ 157 (391)
T 1l0q_A 154 VSV----------------------------------------------------------------------------G 157 (391)
T ss_dssp EEC----------------------------------------------------------------------------C
T ss_pred Eec----------------------------------------------------------------------------C
Confidence 211 0
Q ss_pred CCceEEEEccCCcEE-EEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee---cCCcEEEEEc
Q psy14906 413 SKPTCVYITHCGNFV-LIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG---NDQTVKVWHF 488 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~---~dg~i~iwd~ 488 (583)
..+.+++|+|+++.+ +++..++.|++||+.+++....+ .+...+.+++|+|++++|++++ .++.|++||+
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~------~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV------KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE------ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE------ecCCCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 346789999999887 56778899999999998877766 4566899999999999998887 6899999999
Q ss_pred cCCCCCceEEeeccCCeeeEEeccCCcEE-EEEeCCceEEEEEccccceEEeeccccccee---eEE------------e
Q psy14906 489 KQTGKPPLRSIKLDNGISFFRTHQESSML-AVCLDDFTVNIIDIDTCTIIRKLSGHMGQLT---DAD------------F 552 (583)
Q Consensus 489 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~---~l~------------~ 552 (583)
.++ +.+..+..+..+.+++|+|++++| ++++.|+.|++||+.+++.+..+..|..+.. .+. |
T Consensus 232 ~~~--~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~f 309 (391)
T 1l0q_A 232 GTN--KITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADF 309 (391)
T ss_dssp TTT--EEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCE
T ss_pred CCC--eEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeeccccccccccccc
Confidence 988 778888888889999999999977 5667899999999999999888877655432 122 2
Q ss_pred cCCC----------cEEEEEeCCCeEEEEeCCCccc
Q psy14906 553 SPDS----------RWLITASMDCTIRVWDIPSSQL 578 (583)
Q Consensus 553 s~d~----------~~l~s~~~d~~i~vw~~~~~~~ 578 (583)
+.+. -.+...+.|..+++|++.+|..
T Consensus 310 s~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~ 345 (391)
T 1l0q_A 310 KSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSS 345 (391)
T ss_dssp EESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCE
T ss_pred ccccccccccccceEEEEeCCCCceEEEEECCCCcc
Confidence 2221 3456667788999999988764
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-34 Score=276.74 Aligned_cols=302 Identities=11% Similarity=0.120 Sum_probs=236.6
Q ss_pred ceeeeeecccCccEEEE--ccC---CCEEEEEeCCCcEEEEEcCC-CcEE-EEeeccCCceEEecccCCcceEEEeeCCC
Q psy14906 101 IDIVGTYKGHTSPVHLI--LPF---GPHLISVDEESNVKVWDIKA-EETY-LELSFDNDTFKIMGKRWNSCVNVLEPSPV 173 (583)
Q Consensus 101 ~~~~~~~~~h~~~v~~i--s~~---~~~l~s~~~dg~i~iwd~~~-~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 173 (583)
.+.+..+.+|.+.|+++ +|+ |++|++++.||.|++||+.+ ++.+ ..+. .|...|.+++|+|+
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-----------~h~~~v~~~~~~~~ 97 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQ-----------MHTGPVLDVCWSDD 97 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEE-----------ECSSCEEEEEECTT
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEec-----------cccCCEEEEEECcC
Confidence 45677889999999998 888 69999999999999999998 5554 5555 89999999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEE--ecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccce
Q psy14906 174 VDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSF--RTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVV 251 (583)
Q Consensus 174 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v 251 (583)
+++|++++.||.|++||+.+++.+. +..|...|.+++| +|++. +|++++.||.|++||+++++.+..+ ..+ ..+
T Consensus 98 ~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~-~~~-~~~ 173 (368)
T 3mmy_A 98 GSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSNPMMVL-QLP-ERC 173 (368)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSSCSEEE-ECS-SCE
T ss_pred CCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCcEEEEE-ecC-CCc
Confidence 9999999999999999999888766 5678899999999 88888 8999999999999999999888887 444 466
Q ss_pred EEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCE----EEEeeCCCcEEEEEcccc
Q psy14906 252 TGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN----ILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 252 ~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~----l~~~~~dg~i~iwd~~~~ 327 (583)
.++.+. ...+++++.++.+++|+++.. ..........+...+.++.+.+ +... +++++.||.|++||+...
T Consensus 174 ~~~~~~--~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~dg~i~i~~~~~~ 248 (368)
T 3mmy_A 174 YCADVI--YPMAVVATAERGLIVYQLENQ--PSEFRRIESPLKHQHRCVAIFK-DKQNKPTGFALGSIEGRVAIHYINPP 248 (368)
T ss_dssp EEEEEE--TTEEEEEEGGGCEEEEECSSS--CEEEEECCCSCSSCEEEEEEEE-CTTSCEEEEEEEETTSEEEEEESSCS
T ss_pred eEEEec--CCeeEEEeCCCcEEEEEeccc--cchhhhccccccCCCceEEEcc-cCCCCCCeEEEecCCCcEEEEecCCC
Confidence 666665 457888889999999977543 2222222233445566777765 3444 999999999999999876
Q ss_pred cc---ceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeec
Q psy14906 328 TS---NKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVP 404 (583)
Q Consensus 328 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 404 (583)
.. ...+... ... ..
T Consensus 249 ~~~~~~~~~~~~---------------------------------------------------------~~~------~~ 265 (368)
T 3mmy_A 249 NPAKDNFTFKCH---------------------------------------------------------RSN------GT 265 (368)
T ss_dssp CHHHHSEEEECS---------------------------------------------------------EEC--------
T ss_pred Cccccceeeeee---------------------------------------------------------ecc------cc
Confidence 32 1111000 000 00
Q ss_pred ccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEE
Q psy14906 405 ERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVK 484 (583)
Q Consensus 405 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~ 484 (583)
......+...+.+++|+|++++|++++.||.|++||+.+++.+..+ ..|...|++++|+|++++|++++.|+..+
T Consensus 266 ~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~s~~g~~l~~~s~d~~~~ 340 (368)
T 3mmy_A 266 NTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS-----EQLDQPISACCFNHNGNIFAYASSYDWSK 340 (368)
T ss_dssp --CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC-----CCCSSCEEEEEECTTSSCEEEEECCCSTT
T ss_pred cccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe-----cCCCCCceEEEECCCCCeEEEEecccccc
Confidence 0000011146999999999999999999999999999999998888 78999999999999999999999998766
Q ss_pred EEEccC
Q psy14906 485 VWHFKQ 490 (583)
Q Consensus 485 iwd~~~ 490 (583)
.|++..
T Consensus 341 ~~~~~~ 346 (368)
T 3mmy_A 341 GHEFYN 346 (368)
T ss_dssp CGGGCC
T ss_pred cccccC
Confidence 665543
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=282.32 Aligned_cols=285 Identities=10% Similarity=0.099 Sum_probs=221.5
Q ss_pred CcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc---eeEEEecc-----------------------------------
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE---SLMEFIQT----------------------------------- 203 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~---~~~~~~~~----------------------------------- 203 (583)
..++.+++|+|+|++|+++ .++.|++||+.+++ .+..+..+
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578899999999966655 57899999999998 66555533
Q ss_pred -------------------CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC--CCeehhhhhh--ccccceEEEEEecCC
Q psy14906 204 -------------------WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE--DRQVENQIKK--AHRKVVTGAHFLYNE 260 (583)
Q Consensus 204 -------------------~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~--~~~~~v~~~~~~~~~ 260 (583)
.+.|.+++|+|+++.++++++.||.|++||+. +++.+..+ . .|...|.+++|+|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~~~v~~~~~sp~~ 161 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLR-KRFCFSKRPNAISIAEDD 161 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEE-EEEECSSCEEEEEECTTS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeee-ecccCCCCceEEEEcCCC
Confidence 23699999999999335999999999999999 78777776 4 567899999999999
Q ss_pred CEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC---CCEEEEeeCCCcEEEEEccccccceeeccch
Q psy14906 261 PLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS---SDNILSAAGDSTLRIFNTKSETSNKNLGIAS 337 (583)
Q Consensus 261 ~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 337 (583)
++|++++.++.+++|++............+.+|...|.+++|+| + +++|++++.|+.|++||+.++.....+
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp-~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~---- 236 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIK-DSDGHQFIITSDRDEHIKISHYPQCFIVDKW---- 236 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEE-CTTSCEEEEEEETTSCEEEEEESCTTCEEEE----
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcC-CCCCCcEEEEEcCCCcEEEEECCCCceeeee----
Confidence 99999999999999977543211113346678999999999998 6 789999999999999998654321110
Q ss_pred hhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceE
Q psy14906 338 ANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTC 417 (583)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 417 (583)
T Consensus 237 -------------------------------------------------------------------------------- 236 (450)
T 2vdu_B 237 -------------------------------------------------------------------------------- 236 (450)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceE
Q psy14906 418 VYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLR 497 (583)
Q Consensus 418 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 497 (583)
+ .+|...|.+++|+ ++++|++++.|+.|++||+.++ +++.
T Consensus 237 --------------------------------~-----~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~--~~~~ 276 (450)
T 2vdu_B 237 --------------------------------L-----FGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTG--KNLS 276 (450)
T ss_dssp --------------------------------C-----CCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTC--CEEE
T ss_pred --------------------------------e-----cCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCC--cEee
Confidence 1 4677777788887 7777888877888888887776 5555
Q ss_pred Eeec--------------------------cCCeeeEEeccCCcEEEEEe-CCceEEEEEc--ccc---ceEEeeccccc
Q psy14906 498 SIKL--------------------------DNGISFFRTHQESSMLAVCL-DDFTVNIIDI--DTC---TIIRKLSGHMG 545 (583)
Q Consensus 498 ~~~~--------------------------~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~--~~~---~~~~~~~~h~~ 545 (583)
.+.. ...+.+++|+|++++|++++ .++.|++|++ .++ +.+..+.+| .
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~ 355 (450)
T 2vdu_B 277 TFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-Y 355 (450)
T ss_dssp EEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-S
T ss_pred eecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-C
Confidence 5542 24688999999999999999 8999999999 555 677778888 8
Q ss_pred ceeeEEecCCCcEEEEEeC------CCeEEEEeCC
Q psy14906 546 QLTDADFSPDSRWLITASM------DCTIRVWDIP 574 (583)
Q Consensus 546 ~v~~l~~s~d~~~l~s~~~------d~~i~vw~~~ 574 (583)
.|.+++|+|++.+++.++. +..|.+|.+.
T Consensus 356 ~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 356 NVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp CEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred ceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 8999999996544444443 4557888764
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-34 Score=305.27 Aligned_cols=406 Identities=12% Similarity=0.082 Sum_probs=306.0
Q ss_pred CCCCeEEEEeeCeEEEEEcCCeEEEEeccceeeeeecccCccEEEE--ccCCCEEEEEeCC------CcEEEEEcCCCcE
Q psy14906 72 HEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLI--LPFGPHLISVDEE------SNVKVWDIKAEET 143 (583)
Q Consensus 72 h~~~v~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~d------g~i~iwd~~~~~~ 143 (583)
+...+.+.+++|+.++...++.|++|+..+...+.+.+|...+.++ ||||++||+++.+ ..|++||+.+++
T Consensus 13 ~~~~~~~~~~S~~~iaf~~~~~l~~~~~~gg~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~- 91 (1045)
T 1k32_A 13 MPNLLLNPDIHGDRIIFVCCDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE- 91 (1045)
T ss_dssp CCCCCEEEEEETTEEEEEETTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-
T ss_pred ccceEeCcEEeCCEEEEEECCcEEEEECCCCcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-
Confidence 4566778888887777777789999999777778889999999886 9999999987643 379999999876
Q ss_pred EEEeeccCCceEEecccCCcce-------EEEeeCCCCCEEEEEecC------CeEEEEEccCCceeEEEeccCCCeEEE
Q psy14906 144 YLELSFDNDTFKIMGKRWNSCV-------NVLEPSPVVDIIGVGLSN------KKIILHNILTDESLMEFIQTWGPVTAL 210 (583)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~i-------~~~~~s~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~v~~~ 210 (583)
...+. .|...+ ..++|+|||+++++++.+ ..|.+|++.+++... +..+ ....+
T Consensus 92 ~~~lt-----------~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~-l~~~--~~~~~ 157 (1045)
T 1k32_A 92 IKRIT-----------YFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVP-LNLG--PATHI 157 (1045)
T ss_dssp EEECC-----------CCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEE-CCSC--SCSEE
T ss_pred eEEcc-----------cCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEE-ecCC--Cccee
Confidence 45555 677777 999999999977777644 468888887776543 3333 34567
Q ss_pred EEecCCCCEEEEEcC------------CCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEcc
Q psy14906 211 SFRTDGPPMMVSGSN------------TGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 211 ~~~~~~~~~l~s~~~------------dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 278 (583)
+|+| | ++++++. +...++|....+.....+ .+|...+.++.|+++ .++++++.++.+++|.++
T Consensus 158 ~~sp-G--~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l-~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~ 232 (1045)
T 1k32_A 158 LFAD-G--RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKI-VDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTD 232 (1045)
T ss_dssp EEET-T--EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEE-ECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEE
T ss_pred eeCC-C--EEEEeccCCCccccccccCCCcCCEEEECCCCCeEEC-cCCCCcccceEEeCC-EEEEEEeccCceEEEEEe
Confidence 7999 7 6777642 234566654332334445 689999999999988 677778888999999887
Q ss_pred CCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCC
Q psy14906 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFIL 358 (583)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (583)
... .....+..|. .+...+|+| +++.|+.+. ++.|++||+..... ..+.....
T Consensus 233 ~~g---~~~~~l~~~~-~~~~~~~Sp-DG~~la~~~-~~~i~~~d~~~~~l-~~l~~~~~-------------------- 285 (1045)
T 1k32_A 233 LDG---KDLRKHTSFT-DYYPRHLNT-DGRRILFSK-GGSIYIFNPDTEKI-EKIEIGDL-------------------- 285 (1045)
T ss_dssp TTS---CSCEECCCCC-SSCEEEEEE-SSSCEEEEE-TTEEEEECTTTCCE-EECCCCCC--------------------
T ss_pred CCC---CcceEecCCC-CcceeeEcC-CCCEEEEEe-CCEEEEecCCceEe-eeeccCcc--------------------
Confidence 532 2334455554 467789998 788888874 78999999833221 11100000
Q ss_pred CccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEc-cCCcEEEEEecCceEE
Q psy14906 359 PPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYIT-HCGNFVLIGYSSGHVD 437 (583)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~~dg~i~ 437 (583)
.. ......+...+.+++|+ |||++++++. ++.|+
T Consensus 286 -------------------------------------~~-------~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~ 320 (1045)
T 1k32_A 286 -------------------------------------ES-------PEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAF 320 (1045)
T ss_dssp -------------------------------------CB-------CCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEE
T ss_pred -------------------------------------cc-------cccccccccccceeeecCCCCCEEEEEE-cCEEE
Confidence 00 00000011458899999 9999999887 78899
Q ss_pred EEEcccCccccccCCCCCCCccc-CeeEEEEeCCCcEEEEeecCCcEE-EEEccCCCCCceEEeeccCCeeeEEeccCCc
Q psy14906 438 RFNIQSGAHRGSYGHDNQPGHVG-GVRGVVSDNLNQIVISGGNDQTVK-VWHFKQTGKPPLRSIKLDNGISFFRTHQESS 515 (583)
Q Consensus 438 i~d~~~~~~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~~~dg~i~-iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 515 (583)
+|+..++.... + ..|.. .+..++|+ |++.|++++.++.+. +|++..+ +......+...+..++|+|||+
T Consensus 321 ~~~~~~~~~~~-~-----~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~--~~~~l~~~~~~~~~~~~SpDG~ 391 (1045)
T 1k32_A 321 IQDVSGTYVLK-V-----PEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTG--KAEKFEENLGNVFAMGVDRNGK 391 (1045)
T ss_dssp EECTTSSBEEE-C-----SCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTC--CEEECCCCCCSEEEEEECTTSS
T ss_pred EEcCCCCceEE-c-----cCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCC--CceEecCCccceeeeEECCCCC
Confidence 99998776544 3 46666 89999999 999999998888888 8998876 4444334446899999999999
Q ss_pred EEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCC----------eEEEEeCCCccc
Q psy14906 516 MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDC----------TIRVWDIPSSQL 578 (583)
Q Consensus 516 ~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~----------~i~vw~~~~~~~ 578 (583)
+|++++.++.|++||+.+++....+.+|...+.+++|||||++|++++.++ .|++||+.+++.
T Consensus 392 ~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~ 464 (1045)
T 1k32_A 392 FAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 464 (1045)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred EEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence 999999999999999999998888878999999999999999999887654 899999998873
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-35 Score=282.79 Aligned_cols=284 Identities=13% Similarity=0.163 Sum_probs=231.9
Q ss_pred ceEEEeeCCCCCEEE-EEecCCeEEEEEccCC----ceeEEEeccCCCeEEEEEec-CCCCEEEEEcCCCcEEEEeCCCC
Q psy14906 164 CVNVLEPSPVVDIIG-VGLSNKKIILHNILTD----ESLMEFIQTWGPVTALSFRT-DGPPMMVSGSNTGHLTVWNLEDR 237 (583)
Q Consensus 164 ~i~~~~~s~~~~~l~-~~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~vwd~~~~ 237 (583)
....++++|+...++ +++.+|.|++|++... +.+..+.+|.+.|++++|+| +++ +|++|+.||.|++||+.++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~-~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDN-VIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTT-EEEEEETTSEEEEEECCTT
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCC-EEEEEeCCCeEEEEEccCC
Confidence 344578888776554 4788999999998654 34456778999999999999 777 9999999999999999987
Q ss_pred -------eehhhhhhccccceEEEEEecCC-CEEEEEeCCCeEEEEEccCCCCCceeeEEe--ccCCCCCeeEEEeeCCC
Q psy14906 238 -------QVENQIKKAHRKVVTGAHFLYNE-PLLVTSSPDNTLKLWIFDKADGNGRLLRIR--EGHSAPPNYIQFYGNSS 307 (583)
Q Consensus 238 -------~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~ 307 (583)
+.+..+ .+|...|.+++|+|++ ++|++++.|+.|++||+. ..+.+..+ .+|...|.+++|+| ++
T Consensus 115 ~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~~~~~~~v~~~~~~~-~~ 188 (402)
T 2aq5_A 115 GLVLPLREPVITL-EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVG----TGAAVLTLGPDVHPDTIYSVDWSR-DG 188 (402)
T ss_dssp CCSSCBCSCSEEE-ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETT----TTEEEEEECTTTCCSCEEEEEECT-TS
T ss_pred CCccccCCceEEe-cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECC----CCCccEEEecCCCCCceEEEEECC-CC
Confidence 456666 7899999999999998 699999999999999775 45777777 78999999999998 89
Q ss_pred CEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceE
Q psy14906 308 DNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKV 387 (583)
Q Consensus 308 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 387 (583)
.+|++++.||.|++||+++++....+..
T Consensus 189 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~---------------------------------------------------- 216 (402)
T 2aq5_A 189 ALICTSCRDKRVRVIEPRKGTVVAEKDR---------------------------------------------------- 216 (402)
T ss_dssp SCEEEEETTSEEEEEETTTTEEEEEEEC----------------------------------------------------
T ss_pred CEEEEEecCCcEEEEeCCCCceeeeecc----------------------------------------------------
Confidence 9999999999999999988765433200
Q ss_pred EEeecCcccccceeeecccccccCC-CCceEEEEccCCcEEEEE---ecCceEEEEEcccCccc-cccCCCCCCCcccCe
Q psy14906 388 SLWSFYKSKMDDMFLVPERCKQAKQ-SKPTCVYITHCGNFVLIG---YSSGHVDRFNIQSGAHR-GSYGHDNQPGHVGGV 462 (583)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~---~~dg~i~i~d~~~~~~~-~~~~~~~~~~h~~~v 462 (583)
.+. ..+.++.|+|+++++++| +.++.|++||+.+++.. .... ..|...+
T Consensus 217 ----------------------~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~----~~~~~~v 270 (402)
T 2aq5_A 217 ----------------------PHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQE----LDTSSGV 270 (402)
T ss_dssp ----------------------SSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEE----CCCCSSC
T ss_pred ----------------------CCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEe----ccCCCce
Confidence 011 347899999999999999 79999999999987652 2221 3577889
Q ss_pred eEEEEeCCCcEEEE-eecCCcEEEEEccCCCCCc-e---EEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccce
Q psy14906 463 RGVVSDNLNQIVIS-GGNDQTVKVWHFKQTGKPP-L---RSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI 536 (583)
Q Consensus 463 ~~~~~s~~~~~l~s-~~~dg~i~iwd~~~~~~~~-~---~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 536 (583)
.+++|+|++++|++ ++.||.|++||+.++ +. + ..+.+...+.+++|+|++.++++ .++.+++|++.+++.
T Consensus 271 ~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~--~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 271 LLPFFDPDTNIVYLCGKGDSSIRYFEITSE--APFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp EEEEEETTTTEEEEEETTCSCEEEEEECSS--TTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred eEEEEcCCCCEEEEEEcCCCeEEEEEecCC--CcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 99999999998864 557999999999987 42 3 33344589999999999998875 567999999988654
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=271.66 Aligned_cols=291 Identities=12% Similarity=0.151 Sum_probs=213.0
Q ss_pred EEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEE-EEE
Q psy14906 188 LHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLL-VTS 266 (583)
Q Consensus 188 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~ 266 (583)
+|++.+.+++..+..|...|++++|+|||+ +|++|+.++ +++||+.+++..... +...+..+++.++++.+ +++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~-~la~g~~~~-~~iw~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 77 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQS-CLILSTLKS-FEIYNVHPVAHIMSQ---EMRHLSKVRMLHRTNYVAFVT 77 (355)
T ss_dssp ----------------CCCCCEEEECTTSS-EEEEECSSE-EEEEEETTEEEEEEE---ECSCCCEEEECTTSSEEEEEC
T ss_pred cccccccCCccccccCCCceEEEEECCCCC-EEEEEcCCE-EEEEecCCcceeeee---ecCCeEEEEEcCCCCEEEEEE
Confidence 566777778878889999999999999999 888888775 789999887765543 22357888899988877 567
Q ss_pred eCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccc-ccceeeccchhhhhhhhh
Q psy14906 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE-TSNKNLGIASANRNNLKR 345 (583)
Q Consensus 267 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~ 345 (583)
+.|+.|++||+. .++.+..+. +...|.++.+++ + .++.+ .|+.|++||+.+. +....+..
T Consensus 78 ~~d~~v~iWd~~----~~~~~~~~~-~~~~v~~v~~~~-~--~~~~~-~~~~i~i~d~~~~~~~~~~~~~---------- 138 (355)
T 3vu4_A 78 GVKEVVHIWDDV----KKQDVSRIK-VDAPVKDLFLSR-E--FIVVS-YGDVISVFKFGNPWKRITDDIR---------- 138 (355)
T ss_dssp SSTTEEEEEETT----TTEEEEEEE-CSSCEEEEEECS-S--EEEEE-ETTEEEEEESSTTCCBSSCCEE----------
T ss_pred CCccEEEEEECC----CCcEEEEEE-CCCceEEEEEcC-C--EEEEE-EcCEEEEEECCCCceeeEEecc----------
Confidence 778999999764 456666665 567899999975 2 44444 4789999999876 43332210
Q ss_pred hcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCc
Q psy14906 346 KNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGN 425 (583)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 425 (583)
....+++++ .
T Consensus 139 --------------------------------------------------------------------~~~~~~~s~--~ 148 (355)
T 3vu4_A 139 --------------------------------------------------------------------FGGVCEFSN--G 148 (355)
T ss_dssp --------------------------------------------------------------------EEEEEEEET--T
T ss_pred --------------------------------------------------------------------CCceEEEEc--c
Confidence 122344555 5
Q ss_pred EEEE--EecCceEEEEEcccCc----------------cccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCc-EEEE
Q psy14906 426 FVLI--GYSSGHVDRFNIQSGA----------------HRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT-VKVW 486 (583)
Q Consensus 426 ~l~~--~~~dg~i~i~d~~~~~----------------~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~-i~iw 486 (583)
++++ |+.+|.|++||+.++. ....+ .+|...|++++|+|++++|++++.|++ |++|
T Consensus 149 ~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~-----~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iw 223 (355)
T 3vu4_A 149 LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI-----KAHTNPIKMVRLNRKSDMVATCSQDGTIIRVF 223 (355)
T ss_dssp EEEEEESSCTTCEEEEECCC------------------CCEEE-----CCCSSCEEEEEECTTSSEEEEEETTCSEEEEE
T ss_pred EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE-----EccCCceEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 5555 6889999999998765 14445 799999999999999999999999998 9999
Q ss_pred EccCCCCCceEEee---ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceE--Eeec--------------------
Q psy14906 487 HFKQTGKPPLRSIK---LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTII--RKLS-------------------- 541 (583)
Q Consensus 487 d~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~-------------------- 541 (583)
|+.++ +++..+. +...|.+++|+|+|++|++++.|+.|++||++.+... ..+.
T Consensus 224 d~~~~--~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (355)
T 3vu4_A 224 KTEDG--VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLS 301 (355)
T ss_dssp ETTTC--CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECC
T ss_pred ECCCC--cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEec
Confidence 99998 8888887 6789999999999999999999999999999765311 1111
Q ss_pred -ccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCcccc
Q psy14906 542 -GHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579 (583)
Q Consensus 542 -~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~ 579 (583)
.+......++|++|+++|++++.||.+++|++..++..
T Consensus 302 ~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~ 340 (355)
T 3vu4_A 302 VDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDEM 340 (355)
T ss_dssp CCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETTT
T ss_pred cCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCC
Confidence 11223477999999999999999999999998876543
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-34 Score=277.15 Aligned_cols=258 Identities=19% Similarity=0.298 Sum_probs=213.2
Q ss_pred EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC----------CeehhhhhhccccceEEEEEecCCC-EEEEE
Q psy14906 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED----------RQVENQIKKAHRKVVTGAHFLYNEP-LLVTS 266 (583)
Q Consensus 198 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~ 266 (583)
.....|.+.|++++|+|++..+|++++.+|.|++||+.+ .+.+..+ .+|...|.+++|+|++. +|+++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRL-RGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEE-ECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEe-cCCCCCeEEEEeCCCCCCeEEEE
Confidence 344578899999999998444999999999999999986 4666667 78999999999999998 99999
Q ss_pred eCCCeEEEEEccCCCCCc---eeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhh
Q psy14906 267 SPDNTLKLWIFDKADGNG---RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNL 343 (583)
Q Consensus 267 ~~d~~i~~w~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 343 (583)
+.||.|++|++....... .....+.+|...|.+++|+|.++..|++++.||.|++||++++...
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~------------- 267 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTS------------- 267 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSS-------------
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCC-------------
Confidence 999999999876422111 1245677899999999999867888999999999999998754210
Q ss_pred hhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC
Q psy14906 344 KRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC 423 (583)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 423 (583)
T Consensus 268 -------------------------------------------------------------------------------- 267 (430)
T 2xyi_A 268 -------------------------------------------------------------------------------- 267 (430)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc-EEEEeecCCcEEEEEccCCCCCceEEee-c
Q psy14906 424 GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ-IVISGGNDQTVKVWHFKQTGKPPLRSIK-L 501 (583)
Q Consensus 424 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~ 501 (583)
+....+ ..|...|++++|+|+++ +|++++.||.|++||++... .++..+. +
T Consensus 268 ---------------------~~~~~~-----~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-~~~~~~~~h 320 (430)
T 2xyi_A 268 ---------------------KPSHTV-----DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-LKLHSFESH 320 (430)
T ss_dssp ---------------------SCSEEE-----ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-SCSEEEECC
T ss_pred ---------------------cceeEe-----ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-CCeEEeecC
Confidence 111111 36788899999999887 68899999999999998743 4555554 6
Q ss_pred cCCeeeEEeccCCc-EEEEEeCCceEEEEEccc--------------cceEEeecccccceeeEEecCCCc-EEEEEeCC
Q psy14906 502 DNGISFFRTHQESS-MLAVCLDDFTVNIIDIDT--------------CTIIRKLSGHMGQLTDADFSPDSR-WLITASMD 565 (583)
Q Consensus 502 ~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~--------------~~~~~~~~~h~~~v~~l~~s~d~~-~l~s~~~d 565 (583)
...|.+++|+|+++ +|++++.|+.|++||+.. .+++..+.+|...|++++|+|+++ +|++++.|
T Consensus 321 ~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~d 400 (430)
T 2xyi_A 321 KDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSED 400 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECC
Confidence 67999999999996 699999999999999987 367788889999999999999999 89999999
Q ss_pred CeEEEEeCCCc
Q psy14906 566 CTIRVWDIPSS 576 (583)
Q Consensus 566 ~~i~vw~~~~~ 576 (583)
|.|++|++..+
T Consensus 401 g~i~iw~~~~~ 411 (430)
T 2xyi_A 401 NIMQVWQMAEN 411 (430)
T ss_dssp SEEEEEEECHH
T ss_pred CCEEEeEcccc
Confidence 99999999764
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=271.13 Aligned_cols=309 Identities=10% Similarity=0.048 Sum_probs=215.2
Q ss_pred EEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEec
Q psy14906 135 VWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRT 214 (583)
Q Consensus 135 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~ 214 (583)
||++.+.+.+.... .|...|.+++|+|||++||+|+.++ +++||+.+++.......+ .+..+++.+
T Consensus 3 i~s~~~~~~~~~~~-----------~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~ 68 (355)
T 3vu4_A 3 LGSMITRNPIVPEN-----------HVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLH 68 (355)
T ss_dssp ---------------------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECT
T ss_pred cccccccCCccccc-----------cCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcC
Confidence 45666666665555 8999999999999999999998775 789999887766554433 588889999
Q ss_pred CCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCC
Q psy14906 215 DGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294 (583)
Q Consensus 215 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~ 294 (583)
+++.++++++.|++|++||..+++++..+ .+...|.+++|+++. ++.+ .|+.+++|++.... +.+..+..
T Consensus 69 ~~~~~~~~~~~d~~v~iWd~~~~~~~~~~--~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~---~~~~~~~~-- 138 (355)
T 3vu4_A 69 RTNYVAFVTGVKEVVHIWDDVKKQDVSRI--KVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPW---KRITDDIR-- 138 (355)
T ss_dssp TSSEEEEECSSTTEEEEEETTTTEEEEEE--ECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTC---CBSSCCEE--
T ss_pred CCCEEEEEECCccEEEEEECCCCcEEEEE--ECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCc---eeeEEecc--
Confidence 88845577888999999999999998887 477899999998764 4444 47899999876421 22222222
Q ss_pred CCCeeEEEeeCCCCEEEE--eeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccccc
Q psy14906 295 APPNYIQFYGNSSDNILS--AAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREK 372 (583)
Q Consensus 295 ~~v~~~~~~~~~~~~l~~--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (583)
+...+++++ ..++. ++.||.|++||+.++..........
T Consensus 139 -~~~~~~~s~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~----------------------------------- 179 (355)
T 3vu4_A 139 -FGGVCEFSN---GLLVYSNEFNLGQIHITKLQSSGSATTQDQGV----------------------------------- 179 (355)
T ss_dssp -EEEEEEEET---TEEEEEESSCTTCEEEEECCC----------------------------------------------
T ss_pred -CCceEEEEc---cEEEEeCCCcCcEEEEEECCCCCccccccccc-----------------------------------
Confidence 334455654 45665 6889999999998764221100000
Q ss_pred ccccEEEEecCCceEEEeecCcccccceeeec-ccccccCCCCceEEEEccCCcEEEEEecCce-EEEEEcccCcccccc
Q psy14906 373 DWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVP-ERCKQAKQSKPTCVYITHCGNFVLIGYSSGH-VDRFNIQSGAHRGSY 450 (583)
Q Consensus 373 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~ 450 (583)
......+ ......|...|.+++|+|+|++|++|+.||+ |++||+.+++.+..+
T Consensus 180 -------------------------~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 180 -------------------------QQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp --------------------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred -------------------------cccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 0000001 1122334578999999999999999999998 999999999998888
Q ss_pred CCCCCCC-cccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee------------------c----cCCeee
Q psy14906 451 GHDNQPG-HVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK------------------L----DNGISF 507 (583)
Q Consensus 451 ~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------------------~----~~~v~~ 507 (583)
. .+ |...|.+++|+|++++|++++.|++|++||+..........+. . ..+...
T Consensus 235 ~----~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (355)
T 3vu4_A 235 R----RGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCK 310 (355)
T ss_dssp E----CTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCE
T ss_pred E----cCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceE
Confidence 2 14 9999999999999999999999999999999765212211110 0 123477
Q ss_pred EEeccCCcEEEEEeCCceEEEEEccccc
Q psy14906 508 FRTHQESSMLAVCLDDFTVNIIDIDTCT 535 (583)
Q Consensus 508 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 535 (583)
++|++++++|++++.||.+++|++..++
T Consensus 311 ~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 311 IAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp EEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred EEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 9999999999999999999999987543
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-35 Score=302.77 Aligned_cols=261 Identities=15% Similarity=0.183 Sum_probs=215.7
Q ss_pred eeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcC--CCcEEEEeeccCCceEEecccCCcceEEEeeCCC--CCEE
Q psy14906 104 VGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIK--AEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV--VDII 177 (583)
Q Consensus 104 ~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l 177 (583)
...+.+|.++|+++ +|+|++|++|+.||.|++||+. +++.+..+. +|...|.+++|+|+ +++|
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~-----------~h~~~V~~l~~s~~~~~~~l 70 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT-----------GHEGPVWRVDWAHPKFGTIL 70 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC-----------CCSSCEEEEEECCTTSCSEE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc-----------CCcCceEEEEecCCCCCCEE
Confidence 45688999999998 8999999999999999999998 445666666 89999999999988 9999
Q ss_pred EEEecCCeEEEEEccCCc--eeEEEeccCCCeEEEEEecC--CCCEEEEEcCCCcEEEEeCCCCee--hhhhhhccccce
Q psy14906 178 GVGLSNKKIILHNILTDE--SLMEFIQTWGPVTALSFRTD--GPPMMVSGSNTGHLTVWNLEDRQV--ENQIKKAHRKVV 251 (583)
Q Consensus 178 ~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~~v 251 (583)
++|+.||.|++||+.+++ .+..+..|...|.+++|+|+ ++ ++++|+.||.|++||+.++.. ...+ .+|...|
T Consensus 71 ~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~~~~~-~~~~~~v 148 (753)
T 3jro_A 71 ASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGV 148 (753)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCCCEEE-ECCSSCE
T ss_pred EEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcceeEe-ecCCCce
Confidence 999999999999999887 77778899999999999999 77 999999999999999987732 3334 6799999
Q ss_pred EEEEEec-------------CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC--CCEEEEeeCC
Q psy14906 252 TGAHFLY-------------NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS--SDNILSAAGD 316 (583)
Q Consensus 252 ~~~~~~~-------------~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~d 316 (583)
.+++|+| ++.+|++++.||.|++||+............+.+|...|.+++|+|.+ +.++++++.|
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~D 228 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD 228 (753)
T ss_dssp EEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESS
T ss_pred EEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecC
Confidence 9999999 589999999999999998875544446777889999999999999832 8999999999
Q ss_pred CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccc
Q psy14906 317 STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSK 396 (583)
Q Consensus 317 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 396 (583)
|.|++||+.++.......
T Consensus 229 g~I~iwd~~~~~~~~~~~-------------------------------------------------------------- 246 (753)
T 3jro_A 229 RTCIIWTQDNEQGPWKKT-------------------------------------------------------------- 246 (753)
T ss_dssp SCEEEEEESSSSSCCBCC--------------------------------------------------------------
T ss_pred CEEEEecCCCCCCcceeE--------------------------------------------------------------
Confidence 999999998753211100
Q ss_pred ccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccc
Q psy14906 397 MDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHR 447 (583)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 447 (583)
......+...+.+++|+|+++++++++.||.|++|++..+...
T Consensus 247 --------~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~~ 289 (753)
T 3jro_A 247 --------LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKW 289 (753)
T ss_dssp --------BSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSCC
T ss_pred --------EeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCCc
Confidence 0001112367899999999999999999999999999865543
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=300.42 Aligned_cols=257 Identities=14% Similarity=0.153 Sum_probs=215.7
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEcc--CCceeEEEeccCCCeEEEEEecC--CCCEEEEEcCCCcEEEEeCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNIL--TDESLMEFIQTWGPVTALSFRTD--GPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~s~~~dg~i~vwd~~ 235 (583)
+|.+.|++++|+|++++|++|+.||.|++||+. +++.+..+.+|.+.|++++|+|+ ++ +|++|+.||.|++||+.
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~-~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWKEE 85 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCS-EEEEEETTSCEEEEEEE
T ss_pred cCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCC-EEEEEeCCCeEEEEECC
Confidence 899999999999999999999999999999998 56778889999999999999988 77 99999999999999999
Q ss_pred CCe--ehhhhhhccccceEEEEEecC--CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeC------
Q psy14906 236 DRQ--VENQIKKAHRKVVTGAHFLYN--EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGN------ 305 (583)
Q Consensus 236 ~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------ 305 (583)
+++ ....+ .+|...|.+++|+|+ ++++++++.||.|++||+... .......+.+|...|.+++|+|.
T Consensus 86 ~~~~~~~~~~-~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~--~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 86 NGRWSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN--GTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp TTEEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS--SCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred CCcccccccc-cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC--CCcceeEeecCCCceEEEEecCccccccc
Confidence 886 56666 689999999999999 999999999999999977543 33445567789999999999984
Q ss_pred ------CCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEE
Q psy14906 306 ------SSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAA 379 (583)
Q Consensus 306 ------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (583)
++..+++++.||.|++||++++......
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~---------------------------------------------- 196 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL---------------------------------------------- 196 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEE----------------------------------------------
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCccccee----------------------------------------------
Confidence 5889999999999999999875322111
Q ss_pred EecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC---CcEEEEEecCceEEEEEcccCccccccCCCCCC
Q psy14906 380 IHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC---GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQP 456 (583)
Q Consensus 380 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 456 (583)
......|...+.+++|+|+ ++++++++.||.|++||+.++............
T Consensus 197 -------------------------~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~ 251 (753)
T 3jro_A 197 -------------------------ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEE 251 (753)
T ss_dssp -------------------------EEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSS
T ss_pred -------------------------eeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccC
Confidence 0011123367999999999 999999999999999999987532222111125
Q ss_pred CcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 457 ~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
.|...|++++|+|+++++++++.||.|++|++...
T Consensus 252 ~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 252 KFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp CCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSS
T ss_pred CCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCC
Confidence 78999999999999999999999999999999864
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-33 Score=273.32 Aligned_cols=304 Identities=10% Similarity=0.057 Sum_probs=243.9
Q ss_pred EEeCCCcEEEEE--cCCC--cEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEE--
Q psy14906 126 SVDEESNVKVWD--IKAE--ETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLME-- 199 (583)
Q Consensus 126 s~~~dg~i~iwd--~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~-- 199 (583)
+++.++.+.+|. ..++ +.+..+. . ...+.+++|+|++.++++++.++.|++||+.+++.+..
T Consensus 94 ~~~~~~~~~l~~~d~~~~~~~~~~~~~-----------~-~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~ 161 (433)
T 3bws_A 94 RKPEELNEKLIALDKEGITHRFISRFK-----------T-GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSP 161 (433)
T ss_dssp SSGGGGTTCEEECCBTTCSEEEEEEEE-----------C-SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECC
T ss_pred cccCCCceEEEEECCCCCcceEEEEEc-----------C-CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecC
Confidence 344556444554 4435 4445543 2 34556899999777888888889999999999988873
Q ss_pred ---EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEE-EeCCCeEEEE
Q psy14906 200 ---FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT-SSPDNTLKLW 275 (583)
Q Consensus 200 ---~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~d~~i~~w 275 (583)
+.+|...|.+++|+|++. ++++++.|+.|++||+++++.+..+ ..|...+.+++|+|+++++++ ++.|+.|++|
T Consensus 162 ~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~ 239 (433)
T 3bws_A 162 PEKYKKKLGFVETISIPEHNE-LWVSQMQANAVHVFDLKTLAYKATV-DLTGKWSKILLYDPIRDLVYCSNWISEDISVI 239 (433)
T ss_dssp CHHHHTTCCEEEEEEEGGGTE-EEEEEGGGTEEEEEETTTCCEEEEE-ECSSSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cccccccCCceeEEEEcCCCE-EEEEECCCCEEEEEECCCceEEEEE-cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEE
Confidence 447888999999999998 8999999999999999999888888 678899999999999998854 4479999999
Q ss_pred EccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee--------CCCcEEEEEccccccceeeccchhhhhhhhhhc
Q psy14906 276 IFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA--------GDSTLRIFNTKSETSNKNLGIASANRNNLKRKN 347 (583)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 347 (583)
|++ .++.+..+..+ ..+.+++|+| +++.+++++ .|+.|++||+.+++....+...
T Consensus 240 d~~----~~~~~~~~~~~-~~~~~~~~~~-~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~----------- 302 (433)
T 3bws_A 240 DRK----TKLEIRKTDKI-GLPRGLLLSK-DGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP----------- 302 (433)
T ss_dssp ETT----TTEEEEECCCC-SEEEEEEECT-TSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE-----------
T ss_pred ECC----CCcEEEEecCC-CCceEEEEcC-CCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC-----------
Confidence 765 45666666654 4589999997 788888887 5889999999876543322100
Q ss_pred chhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEE
Q psy14906 348 RLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFV 427 (583)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 427 (583)
..+.+++|+|+++.+
T Consensus 303 -----------------------------------------------------------------~~~~~~~~~~~g~~l 317 (433)
T 3bws_A 303 -----------------------------------------------------------------GNKRHIVSGNTENKI 317 (433)
T ss_dssp -----------------------------------------------------------------ECEEEEEECSSTTEE
T ss_pred -----------------------------------------------------------------CCcceEEECCCCCEE
Confidence 347789999999755
Q ss_pred -EEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec---------------CCcEEEEEccCC
Q psy14906 428 -LIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN---------------DQTVKVWHFKQT 491 (583)
Q Consensus 428 -~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---------------dg~i~iwd~~~~ 491 (583)
++++.++.|++||+.+++....+ .+...+.+++|+|+++++++++. ||.|++||+.++
T Consensus 318 ~~~~~~~~~v~v~d~~~~~~~~~~------~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 318 YVSDMCCSKIEVYDLKEKKVQKSI------PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEE------ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT
T ss_pred EEEecCCCEEEEEECCCCcEEEEe------cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCC
Confidence 55688999999999988887776 46778999999999998888776 579999999988
Q ss_pred CCCceEEeeccCCeeeEEeccCCcEEEEEeC-CceEEEEEccc
Q psy14906 492 GKPPLRSIKLDNGISFFRTHQESSMLAVCLD-DFTVNIIDIDT 533 (583)
Q Consensus 492 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~~ 533 (583)
+.+..+.....+.+++|+|+|++|++++. |+.|++|+++.
T Consensus 392 --~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 392 --TVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp --EEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred --cEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 88888888888999999999999998875 99999999863
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=273.13 Aligned_cols=268 Identities=15% Similarity=0.122 Sum_probs=205.2
Q ss_pred cCCcceEEEeeCCCCCEE-EEEecCCeEEEEEcc--CCceeEEEe--ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q psy14906 160 RWNSCVNVLEPSPVVDII-GVGLSNKKIILHNIL--TDESLMEFI--QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL 234 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l-~~~~~d~~i~iw~~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 234 (583)
.|...|.+++|+|++++| ++++.||.|++||+. +++.+..+. .|...|.+++|+|+++ +|++++.+|.+++|++
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~~g~v~~~~~ 178 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT-TVIIADKFGDVYSIDI 178 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS-EEEEEETTSEEEEEET
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC-EEEEEeCCCcEEEEec
Confidence 456689999999999996 889999999999999 888888886 5668999999999998 8999999999999999
Q ss_pred CCCeehh----hhhhccccceEEEEEecC---CCEEEEEeCCCeEEEEEccCCCCCceeeEE-eccCCCCCeeEEEeeCC
Q psy14906 235 EDRQVEN----QIKKAHRKVVTGAHFLYN---EPLLVTSSPDNTLKLWIFDKADGNGRLLRI-REGHSAPPNYIQFYGNS 306 (583)
Q Consensus 235 ~~~~~~~----~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~ 306 (583)
.+++... .+ .+|...|.+++|+|+ +++|++++.|+.|++||+. ....+.. +.+|...|.+++|+ +
T Consensus 179 ~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~----~~~~~~~~~~~h~~~v~~~~~s--d 251 (450)
T 2vdu_B 179 NSIPEEKFTQEPI-LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP----QCFIVDKWLFGHKHFVSSICCG--K 251 (450)
T ss_dssp TSCCCSSCCCCCS-EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES----CTTCEEEECCCCSSCEEEEEEC--S
T ss_pred CCcccccccceee-ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC----CCceeeeeecCCCCceEEEEEC--C
Confidence 8877554 66 789999999999999 9999999999999999875 3444555 66899999999998 7
Q ss_pred CCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCce
Q psy14906 307 SDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNK 386 (583)
Q Consensus 307 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (583)
+++|++++.|+.|++||+.+++....+........... ....++.. +.
T Consensus 252 ~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~-~~--------------------- 299 (450)
T 2vdu_B 252 DYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLN----------DQHLAPPR-FQ--------------------- 299 (450)
T ss_dssp TTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCC----------TTSBC---------------------------
T ss_pred CCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhh----------hccccccc-cc---------------------
Confidence 99999999999999999999887766533211100000 00000000 00
Q ss_pred EEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe-cCceEEEEEc--ccC---ccccccCCCCCCCccc
Q psy14906 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRFNI--QSG---AHRGSYGHDNQPGHVG 460 (583)
Q Consensus 387 i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~--~~~---~~~~~~~~~~~~~h~~ 460 (583)
. .........+..++++|+++++++++ .++.|++|++ .++ .....+ ..| .
T Consensus 300 -----------------~-~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~-----~~~-~ 355 (450)
T 2vdu_B 300 -----------------N-ENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQII-----TFP-Y 355 (450)
T ss_dssp -----------------------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEE-----ECS-S
T ss_pred -----------------c-cccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEe-----ccC-C
Confidence 0 00001125688999999999999998 8999999999 555 444555 456 8
Q ss_pred CeeEEEEeCCCcEEEEeec------CCcEEEEEccCC
Q psy14906 461 GVRGVVSDNLNQIVISGGN------DQTVKVWHFKQT 491 (583)
Q Consensus 461 ~v~~~~~s~~~~~l~s~~~------dg~i~iwd~~~~ 491 (583)
.|.+++|+|++.+++.++. +..|.+|.+...
T Consensus 356 ~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 356 NVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp CEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred ceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 8999999996544444443 456899988654
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-33 Score=274.60 Aligned_cols=331 Identities=10% Similarity=0.028 Sum_probs=259.5
Q ss_pred eeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC--CCCeehhhhhhc
Q psy14906 169 EPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL--EDRQVENQIKKA 246 (583)
Q Consensus 169 ~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~--~~~~~~~~~~~~ 246 (583)
+|+|++.++++++.+++|.+||..+++.+.++..+.. +..++|+|||+ +|++++.|+.|++||+ .+++.+.++ .
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~-~l~v~~~d~~V~v~D~~~~t~~~~~~i-~- 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGR-YLLVIGRDARIDMIDLWAKEPTKVAEI-K- 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSC-EEEEEETTSEEEEEETTSSSCEEEEEE-E-
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCC-EEEEECCCCeEEEEECcCCCCcEEEEE-e-
Confidence 4899999999999999999999999999999984423 89999999999 8899999999999999 888888887 3
Q ss_pred cccceEEEEEec----CCCEEEEEeC-CCeEEEEEccCCCCCceeeEEecc----------CC-CCCeeEEEeeCCCCEE
Q psy14906 247 HRKVVTGAHFLY----NEPLLVTSSP-DNTLKLWIFDKADGNGRLLRIREG----------HS-APPNYIQFYGNSSDNI 310 (583)
Q Consensus 247 ~~~~v~~~~~~~----~~~~l~s~~~-d~~i~~w~~~~~~~~~~~~~~~~~----------~~-~~v~~~~~~~~~~~~l 310 (583)
+...+..++|+| +|+++++++. +++|.+||.. ..+++..+.. |. ..+..+.++|..+.++
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~----t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE----TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT----TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc----ccccceeecccCcccCccccccCCceEEEEECCCCCEEE
Confidence 456789999999 9999999884 8999999654 4555555543 22 2678899998556667
Q ss_pred EEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEe
Q psy14906 311 LSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLW 390 (583)
Q Consensus 311 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 390 (583)
++...++.|.+||+.+.+...... .
T Consensus 296 vs~~~~g~i~vvd~~~~~~l~~~~-------------------------------------------------------i 320 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNLTVTS-------------------------------------------------------I 320 (543)
T ss_dssp EEETTTTEEEEEECTTSSSCEEEE-------------------------------------------------------E
T ss_pred EEECCCCeEEEEEecCCCcceeEE-------------------------------------------------------e
Confidence 777889999999987754322100 0
Q ss_pred ecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe-cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC
Q psy14906 391 SFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN 469 (583)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 469 (583)
. ....+..+.|+|+|++++++. .++.|.+||..++++...+.... ..|.+....+ ++|
T Consensus 321 ~-------------------~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~-~ph~g~g~~~-~~p 379 (543)
T 1nir_A 321 G-------------------AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGK-TPHPGRGANF-VHP 379 (543)
T ss_dssp E-------------------CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SBCCTTCEEE-EET
T ss_pred c-------------------cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCC-CCCCCCCccc-CCC
Confidence 0 013577899999999877654 58899999999999887763210 2365544444 577
Q ss_pred C-CcEEEEee-cCCcEEEEEccCCC-----CCceEEeecc-CCeeeEEeccCCcEEEEEe-------CCceEEEEEcccc
Q psy14906 470 L-NQIVISGG-NDQTVKVWHFKQTG-----KPPLRSIKLD-NGISFFRTHQESSMLAVCL-------DDFTVNIIDIDTC 534 (583)
Q Consensus 470 ~-~~~l~s~~-~dg~i~iwd~~~~~-----~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~-------~dg~i~i~d~~~~ 534 (583)
+ +..++++. .|++|.+||+.+.. .++++.+..+ ..+..++++|+|++|++++ .+++|.+||++++
T Consensus 380 ~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~ 459 (543)
T 1nir_A 380 KYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNL 459 (543)
T ss_dssp TTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred CCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCC
Confidence 7 66677765 68999999998821 1778888765 5678999999999999987 2679999999998
Q ss_pred ceE-Eee--------cccccceeeEEecCCCcEEEEEe-----CCCeEEEEeCCCcccccccC
Q psy14906 535 TII-RKL--------SGHMGQLTDADFSPDSRWLITAS-----MDCTIRVWDIPSSQLIDCFQ 583 (583)
Q Consensus 535 ~~~-~~~--------~~h~~~v~~l~~s~d~~~l~s~~-----~d~~i~vw~~~~~~~~~~~~ 583 (583)
+.. ..+ ..+...+..++|+|||+.|+.+. .|+.|.|||..|++++++++
T Consensus 460 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 460 DAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK 522 (543)
T ss_dssp TSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred CCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeec
Confidence 876 443 35678899999999999988663 47999999999999988764
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-34 Score=271.98 Aligned_cols=286 Identities=9% Similarity=-0.032 Sum_probs=185.9
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeE-----EEeccCCCeEEEEEec--------CCCCEEEEEcCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLM-----EFIQTWGPVTALSFRT--------DGPPMMVSGSNT 226 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~-----~~~~~~~~v~~~~~~~--------~~~~~l~s~~~d 226 (583)
.|........+++++.+||+++.|++|+|||.++++... .+.+|.+.|++++|+| |++ +|++++.|
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~-~las~s~D 165 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ-VIASVGDD 165 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE-EEEEEETT
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCC-EEEEEECC
Confidence 455566667778889999999999999999999886543 3568999999999998 777 99999999
Q ss_pred CcEEEEeCCCCeehhhhhhccccceEEEEEecCCC-EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeC
Q psy14906 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEP-LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGN 305 (583)
Q Consensus 227 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 305 (583)
++|+|||+.++..+..+ ..|...+.+++|+|++. +|++++.|++|++||+... +.......+........+.+
T Consensus 166 ~tv~~Wd~~~~~~~~~~-~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~----~~~~~~~~~~~~~~~~~~s~- 239 (393)
T 4gq1_A 166 CTLIIWRLTDEGPILAG-YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN----LSAEENSQTELVKNPWLLTL- 239 (393)
T ss_dssp SEEEEEEEETTEEEEEE-EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC----C----------CSCCCSEEE-
T ss_pred CeEEEEECCCCceeeee-cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC----cccccccccCCcccceEEec-
Confidence 99999999988877777 68999999999999874 8999999999999977532 22222222211111111110
Q ss_pred CCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCc
Q psy14906 306 SSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKN 385 (583)
Q Consensus 306 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (583)
..........
T Consensus 240 --------~~~~~~~~~~-------------------------------------------------------------- 249 (393)
T 4gq1_A 240 --------NTLPLVNTCH-------------------------------------------------------------- 249 (393)
T ss_dssp --------ESGGGC------------------------------------------------------------------
T ss_pred --------ccccceeeee--------------------------------------------------------------
Confidence 0000000000
Q ss_pred eEEEeecCcccccceeeecccccccCCCCceEEEEc-cCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeE
Q psy14906 386 KVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYIT-HCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRG 464 (583)
Q Consensus 386 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~ 464 (583)
...+...+.++.|+ |+++.+++++.|+.+++||+..++....+ ..|...+..
T Consensus 250 ----------------------~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l-----~~~~~~~~~ 302 (393)
T 4gq1_A 250 ----------------------SSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEI-----SDSTMKLGP 302 (393)
T ss_dssp ------------------------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------------
T ss_pred ----------------------cccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceE-----eeecCcccc
Confidence 00112567788886 79999999999999999999988877776 677777777
Q ss_pred EEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEecc-CCcEEEEEeCCceEEEEEccccceEEeeccc
Q psy14906 465 VVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ-ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGH 543 (583)
Q Consensus 465 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h 543 (583)
+.+.|+.+.+.... ..+..+.+.+ ++.++++|+.||.|++||+.+++.+..+.+|
T Consensus 303 ~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~ 358 (393)
T 4gq1_A 303 KNLLPNVQGISLFP------------------------SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQL 358 (393)
T ss_dssp -CCSCSEEEECSSC------------------------CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEEC
T ss_pred EEEccccccccccC------------------------cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCC
Confidence 77777654332111 1112222222 4557788889999999999999998888889
Q ss_pred ccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 544 MGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 544 ~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
..+|.+++|+|||++||+++.|| +.+|++.
T Consensus 359 ~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 359 GMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp SSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred CCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 99999999999999999999776 6666653
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-32 Score=244.57 Aligned_cols=283 Identities=13% Similarity=0.041 Sum_probs=197.0
Q ss_pred ceEEEeeCCCCC---EEEEEecCCeEEEEEccCC---ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC
Q psy14906 164 CVNVLEPSPVVD---IIGVGLSNKKIILHNILTD---ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR 237 (583)
Q Consensus 164 ~i~~~~~s~~~~---~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 237 (583)
.+.++.|-..+- -++++++ ..|++|+..++ +.+.++.+|+.+|..+.|.||...++..+-.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~------------ 107 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALG------------ 107 (356)
T ss_dssp EEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEEC------------
T ss_pred EEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeec------------
Confidence 345555544332 4555555 58999999998 8999999999999999999987645544421
Q ss_pred eehhhhhhccccceEEEEEecC----CCEEEEEeCCCeEEEEEccCCCCCceeeEE-eccCCCCCeeEEEeeCCCCEEEE
Q psy14906 238 QVENQIKKAHRKVVTGAHFLYN----EPLLVTSSPDNTLKLWIFDKADGNGRLLRI-REGHSAPPNYIQFYGNSSDNILS 312 (583)
Q Consensus 238 ~~~~~~~~~~~~~v~~~~~~~~----~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~ 312 (583)
.-+...|.+++|+|| ++++++++. .+++|++. .++.+.. ..+
T Consensus 108 -------~~~~~~v~sla~spd~~~~~~~l~s~g~--~~~v~~l~----~g~lv~ss~~g-------------------- 154 (356)
T 2w18_A 108 -------NLEIREIRALFCSSDDESEKQVLLKSGN--IKAVLGLT----KRRLVSSSGTL-------------------- 154 (356)
T ss_dssp -------SSSEEEEEEECC------CCEEEEEEEE--EEEEEEET----TTEEEEEESSS--------------------
T ss_pred -------cccccceEEEEECCCccccccEEEeCCC--eEEEEecC----CCcEEEecccC--------------------
Confidence 125678899999999 999999874 47788542 2233222 223
Q ss_pred eeCCCcEEEEEccc-cccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEee
Q psy14906 313 AAGDSTLRIFNTKS-ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWS 391 (583)
Q Consensus 313 ~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 391 (583)
.|+.|++|++.. ++....+
T Consensus 155 --~d~~V~~~~~s~dG~~~~s~---------------------------------------------------------- 174 (356)
T 2w18_A 155 --SDQQVEVMTFAEDGGGKENQ---------------------------------------------------------- 174 (356)
T ss_dssp --TTCEEEEEEECTTSCEEEEE----------------------------------------------------------
T ss_pred --CCCcEEEEEECCCCceeeee----------------------------------------------------------
Confidence 355666666532 2221111
Q ss_pred cCcccccceeeecccccccCCCCceEEEEcc---CCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEe
Q psy14906 392 FYKSKMDDMFLVPERCKQAKQSKPTCVYITH---CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSD 468 (583)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s 468 (583)
..+...++.++|+| ++.+|++++.|++|++||+.+++.+.++... ..+...+.+++|+
T Consensus 175 -----------------~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~--~~~v~~v~~vafS 235 (356)
T 2w18_A 175 -----------------FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID--DSYQASVCHKAYS 235 (356)
T ss_dssp -----------------EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC--C---CCCEEEEEE
T ss_pred -----------------ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC--CcceeeeEEEEEC
Confidence 01115677888888 7799999999999999999999999988311 1123478888999
Q ss_pred CCCcEE------------EEeecCCcEEEEEccCCCCCceEEee----ccCCeeeEEeccCCcEEEEEeCCceEEEEEcc
Q psy14906 469 NLNQIV------------ISGGNDQTVKVWHFKQTGKPPLRSIK----LDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 469 ~~~~~l------------~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 532 (583)
|+++++ ++|+.|++|++||..++ +.+..+. .......+..+.++.++|+++.|++|+|||+.
T Consensus 236 pdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg--k~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~ 313 (356)
T 2w18_A 236 EMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT--LSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLL 313 (356)
T ss_dssp ETTEEEEEEC------------CCEEEEEEETTTT--EEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred CCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC--EEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECC
Confidence 999876 56888999999999887 6655442 11111123334447889999999999999999
Q ss_pred ccceEEeeccccccee-eEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 533 TCTIIRKLSGHMGQLT-DADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 533 ~~~~~~~~~~h~~~v~-~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
+++++.++.+|...+. .++|+|||++|++|+.|++|+|||+
T Consensus 314 tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 314 LGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 9999999999988766 5899999999999999999999996
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-33 Score=261.41 Aligned_cols=278 Identities=11% Similarity=0.055 Sum_probs=217.4
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCcee
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL 197 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~ 197 (583)
.+++++|++|+.||+|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+...
T Consensus 45 ~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-------------~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~---- 104 (343)
T 3lrv_A 45 YYDKWVCMCRCEDGALHFTQLKDSKTITTIT-------------TPNPRTGGEHPA---IISRGPCNRLLLLYPGN---- 104 (343)
T ss_dssp SEEEEEEEEEEETTEEEEEEESSSSCEEEEE-------------EECCCTTCCCCS---EEEECSTTEEEEEETTT----
T ss_pred cCCCCEEEEECCCCcEEEEECCCCcEEEEEe-------------cCCceeeeeCCc---eEEecCCCeEEEEEccC----
Confidence 5788899999999999999999998887775 356777888888 88999999999998753
Q ss_pred EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEec--CCCEEEEEeCCCeEEEE
Q psy14906 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLY--NEPLLVTSSPDNTLKLW 275 (583)
Q Consensus 198 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~i~~w 275 (583)
.+.+||+.+++.+..+..+|...|.+++|+| ++++|++++.|+.|++|
T Consensus 105 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~w 154 (343)
T 3lrv_A 105 ------------------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQ 154 (343)
T ss_dssp ------------------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEE
T ss_pred ------------------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEE
Confidence 4667888887766666457888999999999 99999999999999999
Q ss_pred EccCCCCCceeeEEe-ccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccc-eeeccchhhhhhhhhhcchhccc
Q psy14906 276 IFDKADGNGRLLRIR-EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN-KNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 276 ~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
|++ .++.+... ..|...+.+++|+| ++.+|++|+.||.|++||+++++.. ..+.
T Consensus 155 d~~----~~~~~~~~~~~~~~~i~~~~~~p-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~------------------- 210 (343)
T 3lrv_A 155 SYE----DDSQYIVHSAKSDVEYSSGVLHK-DSLLLALYSPDGILDVYNLSSPDQASSRFP------------------- 210 (343)
T ss_dssp ESS----SSCEEEEECCCSSCCCCEEEECT-TSCEEEEECTTSCEEEEESSCTTSCCEECC-------------------
T ss_pred ECC----CCcEEEEEecCCCCceEEEEECC-CCCEEEEEcCCCEEEEEECCCCCCCccEEe-------------------
Confidence 775 33444444 34566899999998 8999999999999999999887654 2221
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 433 (583)
..|...|++++|+|++.+|++++.
T Consensus 211 -------------------------------------------------------~~h~~~v~~l~fs~~g~~l~s~~~- 234 (343)
T 3lrv_A 211 -------------------------------------------------------VDEEAKIKEVKFADNGYWMVVECD- 234 (343)
T ss_dssp -------------------------------------------------------CCTTSCEEEEEECTTSSEEEEEES-
T ss_pred -------------------------------------------------------ccCCCCEEEEEEeCCCCEEEEEeC-
Confidence 112368999999999999999994
Q ss_pred ceEEEEEcccCccccccCCCCCCCcccCee--EEEEeCCCcEEEEeec-CCcEEEEEccCCCCCceEEeeccCCeeeEEe
Q psy14906 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVR--GVVSDNLNQIVISGGN-DQTVKVWHFKQTGKPPLRSIKLDNGISFFRT 510 (583)
Q Consensus 434 g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~--~~~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 510 (583)
+.|++||+++++....+... ..|...+. +++|+|++++|++++. |+.+++|++... ...... .++..++|
T Consensus 235 ~~v~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~--~~~~~~---~~~~~~~~ 307 (343)
T 3lrv_A 235 QTVVCFDLRKDVGTLAYPTY--TIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKK--TKNWTK---DEESALCL 307 (343)
T ss_dssp SBEEEEETTSSTTCBSSCCC--BC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTT--TCSEEE---EEEEECCC
T ss_pred CeEEEEEcCCCCcceeeccc--ccccccccceEEEECCCCCEEEEecCCCCcEEEEEEccc--ccceEe---cCceeEec
Confidence 59999999998876665321 22444444 6999999999999988 999999999776 332222 56788889
Q ss_pred cc---CCcEEEEEeCCceEEEEEcc
Q psy14906 511 HQ---ESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 511 s~---~~~~l~~~~~dg~i~i~d~~ 532 (583)
++ +.+.+++++.|+.+.++-..
T Consensus 308 ~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 308 QSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp ----CCCCEEEEEEETTEEEEEEEC
T ss_pred CccccccceeEEEecCCceEEEEec
Confidence 98 88899999999998887543
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-33 Score=268.35 Aligned_cols=335 Identities=9% Similarity=0.071 Sum_probs=214.2
Q ss_pred cCcccEEEEE---eCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeCeEEEEEcCCeEEEEeccceeeee
Q psy14906 30 NHLPVVARFI---RRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGT 106 (583)
Q Consensus 30 ~~~~~~~~~~---p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~ 106 (583)
+..|..+.|. |+.. .+++++.++.|.+|+...... ..........+ ..+..+.......|+... ...
T Consensus 15 ~~~p~~~~w~~~~~~~~-~l~a~g~~~~i~~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~ 84 (393)
T 4gq1_A 15 NVRPYTTTWCSQSPSCS-NLLAIGHDTGITIYCASEEQT---PGSTGLTLQEL----FTIQTGLPTLHLSFSSSC--SYS 84 (393)
T ss_dssp TCCEEEEEECTTSGGGT-TEEEEEESSEEEEEEEEECCS---SSCCSEEEEEE----EEEECSSCEEEEEECTTC--EEE
T ss_pred CCCCeEEEEeCCCCCCC-CEEEEECCCCEEEEECCCCCc---ccccccceeee----EEEecCCCeeeEeecCCc--ccc
Confidence 4556677774 3333 357777899999997532110 00000000000 000001111222333222 122
Q ss_pred ecccCccEEE--EccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCC--------CCCE
Q psy14906 107 YKGHTSPVHL--ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSP--------VVDI 176 (583)
Q Consensus 107 ~~~h~~~v~~--is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--------~~~~ 176 (583)
...|...+.. .++++.+||+++.|++|+|||.++++......+... .+|.+.|.+++|+| |+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~------~gH~~~v~~v~~~p~~~~~~~~d~~~ 158 (393)
T 4gq1_A 85 ENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGK------SGHHNFVNDIDIADVYSADNRLAEQV 158 (393)
T ss_dssp CC----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTT------TSCSSCEEEEEEEEEECTTCSEEEEE
T ss_pred ccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeeccc------CCCCCceEEEEEccccccccCCCCCE
Confidence 2334433333 378889999999999999999999876543321111 18999999999998 8999
Q ss_pred EEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhh-------------
Q psy14906 177 IGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI------------- 243 (583)
Q Consensus 177 l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~------------- 243 (583)
||+|+.|++|+|||+.++.++..+..|...|.+++|+|++..+|++++.|++|++||+.+++.....
T Consensus 159 las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s 238 (393)
T 4gq1_A 159 IASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLT 238 (393)
T ss_dssp EEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEE
T ss_pred EEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEe
Confidence 9999999999999999998888888888999999999998658999999999999999877543322
Q ss_pred -----------hhccccceEEEEEe-cCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEE
Q psy14906 244 -----------KKAHRKVVTGAHFL-YNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL 311 (583)
Q Consensus 244 -----------~~~~~~~v~~~~~~-~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 311 (583)
..+|...+.++.|+ ++++.|++++.|+.+++||+. ..+....+..|...+..+.+.| +...+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~----~~~~~~~l~~~~~~~~~~~~~~-~~~~~~ 313 (393)
T 4gq1_A 239 LNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLF----ANNDYNEISDSTMKLGPKNLLP-NVQGIS 313 (393)
T ss_dssp EESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------------------CCSC-SEEEEC
T ss_pred cccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECc----cCCCCceEeeecCccccEEEcc-cccccc
Confidence 13577788999987 799999999999999999765 2334444555555555555543 211110
Q ss_pred EeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEee
Q psy14906 312 SAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWS 391 (583)
Q Consensus 312 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 391 (583)
..
T Consensus 314 ~~------------------------------------------------------------------------------ 315 (393)
T 4gq1_A 314 LF------------------------------------------------------------------------------ 315 (393)
T ss_dssp SS------------------------------------------------------------------------------
T ss_pred cc------------------------------------------------------------------------------
Confidence 00
Q ss_pred cCcccccceeeecccccccCCCCceEEEEcc--CCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC
Q psy14906 392 FYKSKMDDMFLVPERCKQAKQSKPTCVYITH--CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN 469 (583)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 469 (583)
.......++| ++.++++|+.||.|++||+.+++....+ ..|..+|++++|+|
T Consensus 316 ---------------------~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~-----~~~~~~V~svafsp 369 (393)
T 4gq1_A 316 ---------------------PSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIP-----IQLGMPIVDFCWHQ 369 (393)
T ss_dssp ---------------------CCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEE-----EECSSCEEEEEECT
T ss_pred ---------------------CcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEe-----cCCCCcEEEEEEcC
Confidence 1111222333 4556778889999999999999887776 68889999999999
Q ss_pred CCcEEEEeecCCcEEEEEccC
Q psy14906 470 LNQIVISGGNDQTVKVWHFKQ 490 (583)
Q Consensus 470 ~~~~l~s~~~dg~i~iwd~~~ 490 (583)
||++||+++.+| +.+|.+..
T Consensus 370 dG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 370 DGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp TSSEEEEEESSE-EEEEEEGG
T ss_pred CCCEEEEEeCCC-eEEEEEeC
Confidence 999999998766 66666643
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=265.91 Aligned_cols=249 Identities=15% Similarity=0.237 Sum_probs=211.6
Q ss_pred eecCCCCCCeEEEEeeC---e-EEEEEcCCeEEEEecc-----------ceeeeeecccCccEEEE--ccCCC-EEEEEe
Q psy14906 67 SVSPQHEDDITCLSSDF---F-HIYTSANNIIYAWRRG-----------IDIVGTYKGHTSPVHLI--LPFGP-HLISVD 128 (583)
Q Consensus 67 ~~~~~h~~~v~~~~~~~---~-~~~~~~~~~i~vw~~~-----------~~~~~~~~~h~~~v~~i--s~~~~-~l~s~~ 128 (583)
....+|.+.|+++++.+ . +++++.+|.|++|++. ...+..+.+|...|.++ +|+++ +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 34557999999999843 3 5556689999999975 36677888999999987 88888 999999
Q ss_pred CCCcEEEEEcCCCcE-------EEEeeccCCceEEecccCCcceEEEeeCC-CCCEEEEEecCCeEEEEEccCC---cee
Q psy14906 129 EESNVKVWDIKAEET-------YLELSFDNDTFKIMGKRWNSCVNVLEPSP-VVDIIGVGLSNKKIILHNILTD---ESL 197 (583)
Q Consensus 129 ~dg~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~i~iw~~~~~---~~~ 197 (583)
.||.|++||+.++.. ...+. .|...|.+++|+| ++.+|++++.|+.|++||++++ +.+
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~-----------~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFT-----------GHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEEC-----------CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCS
T ss_pred CCCeEEEEeCCCCCCCCceeccceeec-----------CCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcce
Confidence 999999999987422 23333 7899999999999 7889999999999999999987 577
Q ss_pred EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC-CeehhhhhhccccceEEEEEecCCC-EEEEEeCCCeEEEE
Q psy14906 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED-RQVENQIKKAHRKVVTGAHFLYNEP-LLVTSSPDNTLKLW 275 (583)
Q Consensus 198 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~w 275 (583)
..+..|...|++++|+|++++++++|+.||.|++||+++ ++.+..+ .+|...|.+++|+|+++ +|++++.|+.|++|
T Consensus 271 ~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~-~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iw 349 (430)
T 2xyi_A 271 HTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVW 349 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE-ECCSSCEEEEEECSSCTTEEEEEETTSCCEEE
T ss_pred eEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe-ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEE
Confidence 888899999999999999987899999999999999997 4566677 78999999999999985 69999999999999
Q ss_pred EccCCCC----------CceeeEEeccCCCCCeeEEEeeCCCC-EEEEeeCCCcEEEEEccccc
Q psy14906 276 IFDKADG----------NGRLLRIREGHSAPPNYIQFYGNSSD-NILSAAGDSTLRIFNTKSET 328 (583)
Q Consensus 276 ~~~~~~~----------~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~ 328 (583)
++..... ....+..+.+|...|.+++|+| ++. ++++++.||.|++|++....
T Consensus 350 d~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~s~dg~i~iw~~~~~~ 412 (430)
T 2xyi_A 350 DLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP-NEPWIICSVSEDNIMQVWQMAENV 412 (430)
T ss_dssp EGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECS-SSTTEEEEEETTSEEEEEEECHHH
T ss_pred eCCCCccccCccccccCCcceEEEcCCCCCCceEEEECC-CCCCEEEEEECCCCEEEeEccccc
Confidence 8865221 1367778889999999999998 566 89999999999999997654
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-32 Score=242.92 Aligned_cols=269 Identities=12% Similarity=0.055 Sum_probs=204.1
Q ss_pred EEEEE-eCCCceEEEEeeCCeEEEEecCCc---EEEeecCCCCCCeEEEEeeC---eEEEEEcCC-eE-EEEe----cc-
Q psy14906 35 VARFI-RRRKETLFVTCVGKAFHVYGCNHF---KLLSVSPQHEDDITCLSSDF---FHIYTSANN-II-YAWR----RG- 100 (583)
Q Consensus 35 ~~~~~-p~~~~~~i~~~~~~~i~v~d~~~~---~~~~~~~~h~~~v~~~~~~~---~~~~~~~~~-~i-~vw~----~~- 100 (583)
.+.|- ++.++..|+++....|.+|+..++ ++++++.+|..+|..+++-+ .++..+-.+ .+ .++- .+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~ 123 (356)
T 2w18_A 44 AMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDD 123 (356)
T ss_dssp EEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC----
T ss_pred eeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCc
Confidence 34443 355777888889999999999998 99999999999999999844 344443322 11 1221 22
Q ss_pred ---ceeeeeecccCccEEEEccCCCEEEEEe--CCCcEEEEEc-CCCcEEEEeeccCCceEEecccCCcceEEEeeCC--
Q psy14906 101 ---IDIVGTYKGHTSPVHLILPFGPHLISVD--EESNVKVWDI-KAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSP-- 172 (583)
Q Consensus 101 ---~~~~~~~~~h~~~v~~is~~~~~l~s~~--~dg~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-- 172 (583)
++ ...-.+|...|..+ ++|+.+.+++ .|+.|++|++ .+|+.+..+. .|...++.++|++
T Consensus 124 ~~~~~-~l~s~g~~~~v~~l-~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~-----------~~~~~v~~l~fs~~~ 190 (356)
T 2w18_A 124 ESEKQ-VLLKSGNIKAVLGL-TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQF-----------LMPPEETILTFAEVQ 190 (356)
T ss_dssp --CCE-EEEEEEEEEEEEEE-TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEE-----------ECCCSSCEEEEEEEE
T ss_pred ccccc-EEEeCCCeEEEEec-CCCcEEEecccCCCCcEEEEEECCCCceeeeec-----------cCCCceeeEEeeccC
Confidence 11 11224566666666 5666666644 5999999999 5588888887 8899999999999
Q ss_pred -CCCEEEEEecCCeEEEEEccCCceeEEEeccC---CCeEEEEEecCCCCEE------------EEEcCCCcEEEEeCCC
Q psy14906 173 -VVDIIGVGLSNKKIILHNILTDESLMEFIQTW---GPVTALSFRTDGPPMM------------VSGSNTGHLTVWNLED 236 (583)
Q Consensus 173 -~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~l------------~s~~~dg~i~vwd~~~ 236 (583)
++.+||+++.|++|+|||+++++.+.++.+|. ..+.+++|+|+|. ++ ++|+.|++|++||..+
T Consensus 191 g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~-~lvs~s~~~~~w~laSGs~D~tIklWd~~t 269 (356)
T 2w18_A 191 GMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGL-LFIVLSHPCAKESESLRSPVFQLIVINPKT 269 (356)
T ss_dssp TSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTE-EEEEEC------------CCEEEEEEETTT
T ss_pred CCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCC-EEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence 78999999999999999999999999998653 3677889999998 54 6688899999999999
Q ss_pred Ceehhhh----hhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCe-eEEEeeCCCCEEE
Q psy14906 237 RQVENQI----KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPN-YIQFYGNSSDNIL 311 (583)
Q Consensus 237 ~~~~~~~----~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~ 311 (583)
++.+..+ ..+|...+.+..++ +.++++++.|++|+|||+. .++.+.++.+|...+. .++|+| |+++|+
T Consensus 270 gk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~----tGk~l~tL~gH~~~vvs~vafSP-DG~~La 342 (356)
T 2w18_A 270 TLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLL----LGQCTALLPPVSDQHWSFVKWSG-TDSHLL 342 (356)
T ss_dssp TEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETT----TCSEEEEECCC--CCCCEEEECS-SSSEEE
T ss_pred CEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECC----CCcEEEEecCCCCCeEEEEEECC-CCCEEE
Confidence 9876543 24676665544444 8899999999999999775 6788899999988766 589998 899999
Q ss_pred EeeCCCcEEEEEc
Q psy14906 312 SAAGDSTLRIFNT 324 (583)
Q Consensus 312 ~~~~dg~i~iwd~ 324 (583)
+|+.|++|++||+
T Consensus 343 SGS~D~TIklWd~ 355 (356)
T 2w18_A 343 AGQKDGNIFVYHY 355 (356)
T ss_dssp EECTTSCEEEEEE
T ss_pred EEECCCcEEEecC
Confidence 9999999999995
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=257.52 Aligned_cols=258 Identities=10% Similarity=0.066 Sum_probs=199.5
Q ss_pred ceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeCeEEEEEcCCeEEEEeccce----------eeeeec-ccCc
Q psy14906 44 ETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGID----------IVGTYK-GHTS 112 (583)
Q Consensus 44 ~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~i~vw~~~~~----------~~~~~~-~h~~ 112 (583)
..+++++.|+.|++||+++++.+..+. ...|.++.+.+.+++++.|++|++|+..+. .++.+. +|.+
T Consensus 49 ~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (343)
T 3lrv_A 49 WVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSAN 126 (343)
T ss_dssp EEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCSEEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSS
T ss_pred CEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCceEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCC
Confidence 456667799999999999988877665 456777777667889999999999986532 233333 7778
Q ss_pred cEEEE--cc--CCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEE
Q psy14906 113 PVHLI--LP--FGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIIL 188 (583)
Q Consensus 113 ~v~~i--s~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~i 188 (583)
+|.++ +| ++++|++++.||+|++||+.+++.+..... .+...|.+++|+|++.+|++|+.||.|++
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~----------~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA----------KSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC----------CSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec----------CCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 99998 88 999999999999999999999988666541 45668999999999999999999999999
Q ss_pred EEccCCcee-EEEec-cCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhc---cccceE--EEEEecCCC
Q psy14906 189 HNILTDESL-MEFIQ-TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA---HRKVVT--GAHFLYNEP 261 (583)
Q Consensus 189 w~~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~---~~~~v~--~~~~~~~~~ 261 (583)
||+++++.+ ..+.. |.++|++++|+|++. +|++++ ++.|++||+++++....+ .. |...+. +++|+|+++
T Consensus 197 wd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~-~l~s~~-~~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~ 273 (343)
T 3lrv_A 197 YNLSSPDQASSRFPVDEEAKIKEVKFADNGY-WMVVEC-DQTVVCFDLRKDVGTLAY-PTYTIPEFKTGTVTYDIDDSGK 273 (343)
T ss_dssp EESSCTTSCCEECCCCTTSCEEEEEECTTSS-EEEEEE-SSBEEEEETTSSTTCBSS-CCCBC-----CCEEEEECTTSS
T ss_pred EECCCCCCCccEEeccCCCCEEEEEEeCCCC-EEEEEe-CCeEEEEEcCCCCcceee-cccccccccccceEEEECCCCC
Confidence 999999988 78888 999999999999998 888888 559999999988766555 22 333443 699999999
Q ss_pred EEEEEeC-CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEee--CCCCEEEEeeCCCcEEEEEc
Q psy14906 262 LLVTSSP-DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG--NSSDNILSAAGDSTLRIFNT 324 (583)
Q Consensus 262 ~l~s~~~-d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~dg~i~iwd~ 324 (583)
+|++++. |+.+++|+++........ .++..+.|.+ .+...+++++.||.+.++-.
T Consensus 274 ~l~~~s~~d~~i~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 274 NMIAYSNESNSLTIYKFDKKTKNWTK--------DEESALCLQSDTADFTDMDVVCGDGGIAAILK 331 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTTCSEEE--------EEEEECCC----CCCCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCCcEEEEEEcccccceEe--------cCceeEecCccccccceeEEEecCCceEEEEe
Confidence 9999988 999999988644322222 2334455543 14566777777777776643
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-31 Score=262.67 Aligned_cols=335 Identities=9% Similarity=0.082 Sum_probs=259.2
Q ss_pred ccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEc
Q psy14906 112 SPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNI 191 (583)
Q Consensus 112 ~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~ 191 (583)
.+...++|++..+++.+.|++|.+||..+++.+.++. .+.. +..++|+|||++|++++.++.|.+||+
T Consensus 140 ~~~~~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~-----------~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~ 207 (543)
T 1nir_A 140 KQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVID-----------TGYA-VHISRMSASGRYLLVIGRDARIDMIDL 207 (543)
T ss_dssp SCCSCCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEE-----------CSTT-EEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred ccccccCCCCEEEEEEcCCCeEEEEECCCceEEEEEe-----------cCcc-cceEEECCCCCEEEEECCCCeEEEEEC
Confidence 3444578999999999999999999999999998886 2223 889999999999999999999999999
Q ss_pred --cCCceeEEEeccCCCeEEEEEec----CCCCEEEEEc-CCCcEEEEeCCCCeehhhhhh-c--------ccc-ceEEE
Q psy14906 192 --LTDESLMEFIQTWGPVTALSFRT----DGPPMMVSGS-NTGHLTVWNLEDRQVENQIKK-A--------HRK-VVTGA 254 (583)
Q Consensus 192 --~~~~~~~~~~~~~~~v~~~~~~~----~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~-~--------~~~-~v~~~ 254 (583)
.+++.+.++..+ ..+..++|+| ||+ ++++++ .+++|.+||..+++++..+.. + |.. .+.++
T Consensus 208 ~~~t~~~~~~i~~g-~~p~~va~sp~~~~dg~-~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i 285 (543)
T 1nir_A 208 WAKEPTKVAEIKIG-IEARSVESSKFKGYEDR-YTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAI 285 (543)
T ss_dssp TSSSCEEEEEEECC-SEEEEEEECCSTTCTTT-EEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEE
T ss_pred cCCCCcEEEEEecC-CCcceEEeCCCcCCCCC-EEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEE
Confidence 889998888855 6789999999 999 677766 589999999999988877621 1 223 78899
Q ss_pred EEecCCC-EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee-CCCcEEEEEcccccccee
Q psy14906 255 HFLYNEP-LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA-GDSTLRIFNTKSETSNKN 332 (583)
Q Consensus 255 ~~~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~ 332 (583)
.++|++. ++++...++.|.+||+... ....+..+ .+...+..+.|+| +++++++++ .+++|.+||+.++++...
T Consensus 286 ~~s~~~~~~~vs~~~~g~i~vvd~~~~--~~l~~~~i-~~~~~~~~~~~sp-dg~~l~va~~~~~~v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 286 IASHEHPEFIVNVKETGKVLLVNYKDI--DNLTVTSI-GAAPFLHDGGWDS-SHRYFMTAANNSNKVAVIDSKDRRLSAL 361 (543)
T ss_dssp EECSSSSEEEEEETTTTEEEEEECTTS--SSCEEEEE-ECCSSCCCEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred EECCCCCEEEEEECCCCeEEEEEecCC--CcceeEEe-ccCcCccCceECC-CCCEEEEEecCCCeEEEEECCCCeEEEe
Confidence 9999776 4566677899999976532 11122233 3566788999998 788776554 588999999998876554
Q ss_pred eccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCC
Q psy14906 333 LGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQ 412 (583)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (583)
+.... ..|.
T Consensus 362 i~~g~-----------------------------------------------------------------------~ph~ 370 (543)
T 1nir_A 362 VDVGK-----------------------------------------------------------------------TPHP 370 (543)
T ss_dssp EECSS-----------------------------------------------------------------------SBCC
T ss_pred eccCC-----------------------------------------------------------------------CCCC
Confidence 32100 0000
Q ss_pred CCceEEEEccC-CcEEEEEe-cCceEEEEEccc-------CccccccCCCCCCCcccCeeEEEEeCCCcEEEEee-----
Q psy14906 413 SKPTCVYITHC-GNFVLIGY-SSGHVDRFNIQS-------GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG----- 478 (583)
Q Consensus 413 ~~i~~~~~s~~-~~~l~~~~-~dg~i~i~d~~~-------~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~----- 478 (583)
.....+ ++|+ +..++++. .+++|.+||+.+ .+.+..+ ..|...+..++++|++++|++++
T Consensus 371 g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l-----~~~g~~~~~v~~~pdg~~l~v~~~~~~~ 444 (543)
T 1nir_A 371 GRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL-----QGQGGGSLFIKTHPKSSHLYVDTTFNPD 444 (543)
T ss_dssp TTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE-----ECSCSCCCCEECCTTCCEEEECCTTCSS
T ss_pred CCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEE-----EcCCCCceEEEcCCCCCcEEEecCCCCC
Confidence 122232 4677 55566664 579999999988 7777777 67888899999999999999987
Q ss_pred --cCCcEEEEEccCCCCCce-EEe---------eccCCeeeEEeccCCcEEEEEe-----CCceEEEEEccccceEEeec
Q psy14906 479 --NDQTVKVWHFKQTGKPPL-RSI---------KLDNGISFFRTHQESSMLAVCL-----DDFTVNIIDIDTCTIIRKLS 541 (583)
Q Consensus 479 --~dg~i~iwd~~~~~~~~~-~~~---------~~~~~v~~~~~s~~~~~l~~~~-----~dg~i~i~d~~~~~~~~~~~ 541 (583)
.+++|.+||+.+. +.. ..+ .+...+..++|+|+|+.|+++. .++.|.|||.++++++.+++
T Consensus 445 ~~~~~~v~v~d~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 522 (543)
T 1nir_A 445 ARISQSVAVFDLKNL--DAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK 522 (543)
T ss_dssp HHHHTCEEEEETTCT--TSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred cccCceEEEEECCCC--CCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeec
Confidence 3779999999988 555 443 2346799999999999888763 47999999999999999888
Q ss_pred cc
Q psy14906 542 GH 543 (583)
Q Consensus 542 ~h 543 (583)
.+
T Consensus 523 ~~ 524 (543)
T 1nir_A 523 DP 524 (543)
T ss_dssp CT
T ss_pred CC
Confidence 54
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-30 Score=246.57 Aligned_cols=299 Identities=11% Similarity=0.035 Sum_probs=229.6
Q ss_pred cceEEEeeCCCCC-EEEEEe----cCC----eEEEEEc--cCCcee--EEEeccCCCeEEEEEecC--------------
Q psy14906 163 SCVNVLEPSPVVD-IIGVGL----SNK----KIILHNI--LTDESL--MEFIQTWGPVTALSFRTD-------------- 215 (583)
Q Consensus 163 ~~i~~~~~s~~~~-~l~~~~----~d~----~i~iw~~--~~~~~~--~~~~~~~~~v~~~~~~~~-------------- 215 (583)
..+...+|.+.|. ++++|+ .+| .+++||+ .+++.+ ..+.+|...+..+++++.
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 4677888888875 555775 467 8999999 889887 457888888888877751
Q ss_pred CCCEEEEEcCC------CcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCC---eEEEEEccCCCCCcee
Q psy14906 216 GPPMMVSGSNT------GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN---TLKLWIFDKADGNGRL 286 (583)
Q Consensus 216 ~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~---~i~~w~~~~~~~~~~~ 286 (583)
+. .++.++.+ +.|++||+.. .....+ .+|...+.+++|+|+|++|++++.++ .|++||++. ++.
T Consensus 143 ~~-~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l-~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t----g~~ 215 (415)
T 2hqs_A 143 RT-RIAYVVQTNGGQFPYELRVSDYDG-YNQFVV-HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN----GAV 215 (415)
T ss_dssp TC-EEEEEEECSSSSCCEEEEEEETTS-CSCEEE-EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT----CCE
T ss_pred CC-EEEEEEecCCCCccceEEEEcCCC-CCCEEE-eCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCC----CcE
Confidence 44 34444433 7999999974 445666 67899999999999999999999875 999997652 233
Q ss_pred eEEeccCCCCCeeEEEeeCCCCEEE-EeeCCCc--EEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccce
Q psy14906 287 LRIREGHSAPPNYIQFYGNSSDNIL-SAAGDST--LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQ 363 (583)
Q Consensus 287 ~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (583)
..+..|...+.+++|+| |++.|+ +++.++. |++||+.+++.....
T Consensus 216 -~~l~~~~~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~~~l~------------------------------ 263 (415)
T 2hqs_A 216 -RQVASFPRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQIRQVT------------------------------ 263 (415)
T ss_dssp -EEEECCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEECC------------------------------
T ss_pred -EEeecCCCcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCEEeCc------------------------------
Confidence 34566778899999998 788777 6666554 888998776432110
Q ss_pred eeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec-Cc--eEEEEE
Q psy14906 364 FSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS-SG--HVDRFN 440 (583)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg--~i~i~d 440 (583)
.+...+.+++|+|||++|++++. ++ .|++||
T Consensus 264 ----------------------------------------------~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 264 ----------------------------------------------DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp ----------------------------------------------CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ----------------------------------------------CCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 01145789999999999988876 44 688889
Q ss_pred cccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecC---CcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEE
Q psy14906 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGND---QTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSML 517 (583)
Q Consensus 441 ~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 517 (583)
+.+++... + ..|...+.+++|+|+|++|++++.+ ..|++||+.++ +.. .+.....+.+++|+|||++|
T Consensus 298 ~~~~~~~~-l-----~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~--~~~-~l~~~~~~~~~~~spdg~~l 368 (415)
T 2hqs_A 298 INGGAPQR-I-----TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG--GVQ-VLSSTFLDETPSLAPNGTMV 368 (415)
T ss_dssp TTSSCCEE-C-----CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC--CEE-ECCCSSSCEEEEECTTSSEE
T ss_pred CCCCCEEE-E-----ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCC--CEE-EecCCCCcCCeEEcCCCCEE
Confidence 88876433 3 3567789999999999999988764 58999999987 553 34334489999999999999
Q ss_pred EEEeCCc---eEEEEEccccceEEeecccccceeeEEecCCC
Q psy14906 518 AVCLDDF---TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDS 556 (583)
Q Consensus 518 ~~~~~dg---~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~ 556 (583)
++++.++ .|++||+. ++....+.+|.+.|.+++|+|.-
T Consensus 369 ~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 369 IYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp EEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCC
T ss_pred EEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccc
Confidence 9988776 89999987 55677888999999999999964
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-29 Score=262.11 Aligned_cols=356 Identities=9% Similarity=0.025 Sum_probs=243.6
Q ss_pred CcceEEEeeCCCCCEEEEEec-CC-----eEEEEEccCCceeEEEeccCCC------------------------eEEEE
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLS-NK-----KIILHNILTDESLMEFIQTWGP------------------------VTALS 211 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~-d~-----~i~iw~~~~~~~~~~~~~~~~~------------------------v~~~~ 211 (583)
...+.+++|||||++|++++. ++ .|++||+.+++....+..+... +.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 567999999999999999988 88 8999999999887777655333 78999
Q ss_pred EecCCCCEEEEEcCCCcEEEEeCCCCe--ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEE
Q psy14906 212 FRTDGPPMMVSGSNTGHLTVWNLEDRQ--VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289 (583)
Q Consensus 212 ~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~ 289 (583)
|+|||+ .|++++. +.|++||+.+++ ....+ ..|...+..++|+|||++|++++ ++.|.+|+++ .++....
T Consensus 116 ~SpDg~-~l~~~~~-~~i~~~d~~~~~~~~~~~l-~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~----~g~~~~~ 187 (741)
T 2ecf_A 116 WSPDAQ-RLLFPLG-GELYLYDLKQEGKAAVRQL-THGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLA----SGRQMQL 187 (741)
T ss_dssp ECTTSS-EEEEEET-TEEEEEESSSCSTTSCCBC-CCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETT----TTEEEEC
T ss_pred ECCCCC-EEEEEeC-CcEEEEECCCCCcceEEEc-ccCCcccccccCCCCCCEEEEEe-CCcEEEEecC----CCCEEEe
Confidence 999999 6777765 899999999873 34445 56788899999999999999987 5689999764 2333333
Q ss_pred eccCCC----------------CCeeEEEeeCCCCEEEEeeCCC-cEEEEEccccccceeeccchhhhhhhhhhcchhcc
Q psy14906 290 REGHSA----------------PPNYIQFYGNSSDNILSAAGDS-TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKM 352 (583)
Q Consensus 290 ~~~~~~----------------~v~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (583)
...+.. .+..++|+| |+++|++++.|+ .+..|+..........
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~------------------- 247 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTD------------------- 247 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEE-------------------
T ss_pred ccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCccc-------------------
Confidence 332322 257899998 899888887653 3333331100000000
Q ss_pred ccccCCCccceeeeecccccccccEEEEecCCceEEEeecCc-ccccceeeecccccccCCCCceEEEEccCCcEEEEEe
Q psy14906 353 NEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYK-SKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY 431 (583)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 431 (583)
......+... .......+.+||... ......... ..+...+..++| |||++|+++.
T Consensus 248 ~~~~~~~~~g-----------------~~~~~~~l~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~~-pDg~~l~~~~ 304 (741)
T 2ecf_A 248 VIEQRYPAAG-----------------DANVQVKLGVISPAEQAQTQWIDLG-----KEQDIYLARVNW-RDPQHLSFQR 304 (741)
T ss_dssp EEEEECCBTT-----------------SCCCEEEEEEECSSTTCCCEEECCC-----SCSSEEEEEEEE-EETTEEEEEE
T ss_pred ceEeecCCCC-----------------CCCCeeEEEEEECCCCCceEEecCC-----CCcceEEEEEEe-CCCCEEEEEE
Confidence 0000000000 000112456667655 432111110 122356889999 9999999775
Q ss_pred c-----CceEEEEEcccCccccccCCCCCCCccc----CeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee-c
Q psy14906 432 S-----SGHVDRFNIQSGAHRGSYGHDNQPGHVG----GVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK-L 501 (583)
Q Consensus 432 ~-----dg~i~i~d~~~~~~~~~~~~~~~~~h~~----~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~ 501 (583)
. +..|++||+.+++....+ ..+.. .+..++|+|||+++++++.||.++||.++... . ...+. +
T Consensus 305 ~~~~~~~~~i~~~d~~~g~~~~~~-----~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~-~-~~~l~~~ 377 (741)
T 2ecf_A 305 QSRDQKKLDLVEVTLASNQQRVLA-----HETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKG-K-AAALTHG 377 (741)
T ss_dssp EETTSSEEEEEEEETTTCCEEEEE-----EEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSS-C-EEESCCS
T ss_pred ecccCCeEEEEEEECCCCceEEEE-----EcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCC-C-eeeeeec
Confidence 4 678999999998876655 23332 45689999999999999999988898887432 3 44443 3
Q ss_pred cCCeeeE-EeccCCcEEEE-EeCCc--eEEEEEccc-cceEEeecccccceeeEEecCCCcEEEEEeCC----CeEEEEe
Q psy14906 502 DNGISFF-RTHQESSMLAV-CLDDF--TVNIIDIDT-CTIIRKLSGHMGQLTDADFSPDSRWLITASMD----CTIRVWD 572 (583)
Q Consensus 502 ~~~v~~~-~~s~~~~~l~~-~~~dg--~i~i~d~~~-~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d----~~i~vw~ 572 (583)
...+..+ .|+|+|+.|+. ++.++ .++||++.. ++....+.. ...+..++|||||++|+....+ ..+.+|+
T Consensus 378 ~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~ 456 (741)
T 2ecf_A 378 NWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFR 456 (741)
T ss_dssp SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEE
T ss_pred ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEE
Confidence 4567776 59999997765 44455 899999874 555666665 6678899999999998866443 4789998
Q ss_pred CCCc
Q psy14906 573 IPSS 576 (583)
Q Consensus 573 ~~~~ 576 (583)
...+
T Consensus 457 ~~~~ 460 (741)
T 2ecf_A 457 ANGE 460 (741)
T ss_dssp TTSC
T ss_pred cCCC
Confidence 7544
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-29 Score=238.76 Aligned_cols=294 Identities=10% Similarity=0.091 Sum_probs=221.9
Q ss_pred ccCC-CEEEEEe----CCC----cEEEEEc--CCCcEEEEeeccCCceEEecccCCcceEEEeeCC--------------
Q psy14906 118 LPFG-PHLISVD----EES----NVKVWDI--KAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSP-------------- 172 (583)
Q Consensus 118 s~~~-~~l~s~~----~dg----~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-------------- 172 (583)
.+.| +++++|+ .+| .+++||+ .+++++....+. +|...+..+++++
T Consensus 71 ~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~d~~~~~~~g~~~~ 141 (415)
T 2hqs_A 71 SALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYK---------VNKQWLRYAGHTASDEVFEKLTGIKGA 141 (415)
T ss_dssp HTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEE---------ECGGGHHHHHHHHHHHHHHHHHSSCCC
T ss_pred HhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEE---------cChhHHHHHHHHHHHHHHHHHcCCCCc
Confidence 4555 4666775 467 8999999 999887443222 7777777777764
Q ss_pred CCCEEEEEecC------CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCC---cEEEEeCCCCeehhhh
Q psy14906 173 VVDIIGVGLSN------KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTG---HLTVWNLEDRQVENQI 243 (583)
Q Consensus 173 ~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~ 243 (583)
.+..++.++.+ +.|++||+. +.....+..|...+.+++|+|||+ .|++++.++ .|++||+.+++... +
T Consensus 142 ~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~-~la~~s~~~~~~~i~~~d~~tg~~~~-l 218 (415)
T 2hqs_A 142 FRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGS-KLAYVTFESGRSALVIQTLANGAVRQ-V 218 (415)
T ss_dssp TTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTTCCEEE-E
T ss_pred CCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCC-EEEEEEecCCCcEEEEEECCCCcEEE-e
Confidence 26677776664 799999997 556777888889999999999999 788887765 89999999887753 4
Q ss_pred hhccccceEEEEEecCCCEEE-EEeCCCe--EEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC-CC--
Q psy14906 244 KKAHRKVVTGAHFLYNEPLLV-TSSPDNT--LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DS-- 317 (583)
Q Consensus 244 ~~~~~~~v~~~~~~~~~~~l~-s~~~d~~--i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg-- 317 (583)
..|...+.+++|+|||++|+ +++.++. |.+||++. ++ ...+..|...+.+++|+| |++.|++++. ++
T Consensus 219 -~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~----~~-~~~l~~~~~~~~~~~~sp-dg~~l~~~s~~~g~~ 291 (415)
T 2hqs_A 219 -ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS----GQ-IRQVTDGRSNNTEPTWFP-DSQNLAFTSDQAGRP 291 (415)
T ss_dssp -ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT----CC-EEECCCCSSCEEEEEECT-TSSEEEEEECTTSSC
T ss_pred -ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC----CC-EEeCcCCCCcccceEECC-CCCEEEEEECCCCCc
Confidence 46788999999999999888 6666655 77786542 22 356777888899999998 8998888776 45
Q ss_pred cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccc
Q psy14906 318 TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKM 397 (583)
Q Consensus 318 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 397 (583)
.|++||+.+++.....
T Consensus 292 ~i~~~d~~~~~~~~l~---------------------------------------------------------------- 307 (415)
T 2hqs_A 292 QVYKVNINGGAPQRIT---------------------------------------------------------------- 307 (415)
T ss_dssp EEEEEETTSSCCEECC----------------------------------------------------------------
T ss_pred EEEEEECCCCCEEEEe----------------------------------------------------------------
Confidence 5777787665421110
Q ss_pred cceeeecccccccCCCCceEEEEccCCcEEEEEecC---ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEE
Q psy14906 398 DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS---GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIV 474 (583)
Q Consensus 398 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 474 (583)
.+...+.+++|+|+|++|++++.+ ..|++||+.+++... + ..|. .+.+++|+|++++|
T Consensus 308 ------------~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l-----~~~~-~~~~~~~spdg~~l 368 (415)
T 2hqs_A 308 ------------WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-L-----SSTF-LDETPSLAPNGTMV 368 (415)
T ss_dssp ------------CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-C-----CCSS-SCEEEEECTTSSEE
T ss_pred ------------cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-e-----cCCC-CcCCeEEcCCCCEE
Confidence 001356789999999999988764 689999999887643 3 3443 89999999999999
Q ss_pred EEeecCC---cEEEEEccCCCCCceEEeeccCCeeeEEeccCCc
Q psy14906 475 ISGGNDQ---TVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS 515 (583)
Q Consensus 475 ~s~~~dg---~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 515 (583)
++++.++ .|++||+... .......+.+.|.+++|+|...
T Consensus 369 ~~~s~~~~~~~l~~~d~~g~--~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 369 IYSSSQGMGSVLNLVSTDGR--FKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEEEEETTEEEEEEEETTSC--CEEECCCSSSEEEEEEECCCCC
T ss_pred EEEEcCCCccEEEEEECCCC--cEEEeeCCCCCCcCCccccccc
Confidence 9888777 7999999864 4333344557899999999654
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-28 Score=257.10 Aligned_cols=337 Identities=10% Similarity=0.074 Sum_probs=237.3
Q ss_pred ccEEEE--ccCCCEEEEEeC-CC-----cEEEEEcCCCcEEEEeeccCCc-----eEEec--------ccCCcceEEEee
Q psy14906 112 SPVHLI--LPFGPHLISVDE-ES-----NVKVWDIKAEETYLELSFDNDT-----FKIMG--------KRWNSCVNVLEP 170 (583)
Q Consensus 112 ~~v~~i--s~~~~~l~s~~~-dg-----~i~iwd~~~~~~~~~~~~~~~~-----~~~~~--------~~~~~~i~~~~~ 170 (583)
..+.++ ||||++|++++. |+ .|++||+.+++....+...... ..... ......+.+++|
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 345554 999999999998 88 8999999999877666532100 00000 000034889999
Q ss_pred CCCCCEEEEEecCCeEEEEEccCCc--eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccc
Q psy14906 171 SPVVDIIGVGLSNKKIILHNILTDE--SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHR 248 (583)
Q Consensus 171 s~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 248 (583)
||||++|++++. +.|++||+.+++ ....+..+...+..++|+|||+ .|+.++ ++.|++||+.+++..... ..+.
T Consensus 117 SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~-~la~~~-~~~i~~~d~~~g~~~~~~-~~~~ 192 (741)
T 2ecf_A 117 SPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGG-FVSFIR-GRNLWVIDLASGRQMQLT-ADGS 192 (741)
T ss_dssp CTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSS-EEEEEE-TTEEEEEETTTTEEEECC-CCCC
T ss_pred CCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCC-EEEEEe-CCcEEEEecCCCCEEEec-cCCc
Confidence 999999999886 899999999873 4455677778899999999999 677776 468999999988766544 3333
Q ss_pred cc----------------eEEEEEecCCCEEEEEeCCC---------------------------------eEEEEEccC
Q psy14906 249 KV----------------VTGAHFLYNEPLLVTSSPDN---------------------------------TLKLWIFDK 279 (583)
Q Consensus 249 ~~----------------v~~~~~~~~~~~l~s~~~d~---------------------------------~i~~w~~~~ 279 (583)
.. +.+++|+|||++|++++.|+ .|.+||++
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~- 271 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA- 271 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS-
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC-
Confidence 22 47899999999999987665 66777543
Q ss_pred CC-CCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC-----CCcEEEEEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 280 AD-GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-----DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 280 ~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
. +....+.....|...+..++| | |+++|++++. +..|++||+.+++....+....
T Consensus 272 -~~~~~~~~~~~~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~---------------- 332 (741)
T 2ecf_A 272 -EQAQTQWIDLGKEQDIYLARVNW-R-DPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETS---------------- 332 (741)
T ss_dssp -TTCCCEEECCCSCSSEEEEEEEE-E-ETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEEC----------------
T ss_pred -CCCceEEecCCCCcceEEEEEEe-C-CCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCC----------------
Confidence 2 222221111246778899999 8 7888887653 5678999988765433221000
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 433 (583)
...-..+..++|+|||++++++..+
T Consensus 333 -------------------------------------------------------~~~~~~~~~~~~spdg~~~~~~~~~ 357 (741)
T 2ecf_A 333 -------------------------------------------------------PTWVPLHNSLRFLDDGSILWSSERT 357 (741)
T ss_dssp -------------------------------------------------------SSCCCCCSCCEECTTSCEEEEECTT
T ss_pred -------------------------------------------------------CCcCCcCCceEECCCCeEEEEecCC
Confidence 0000134578999999999999999
Q ss_pred ceEEEEEcc-cCccccccCCCCCCCcccCeeEE-EEeCCCcEEE-EeecCC--cEEEEEccCCCCCceEEeeccCCeeeE
Q psy14906 434 GHVDRFNIQ-SGAHRGSYGHDNQPGHVGGVRGV-VSDNLNQIVI-SGGNDQ--TVKVWHFKQTGKPPLRSIKLDNGISFF 508 (583)
Q Consensus 434 g~i~i~d~~-~~~~~~~~~~~~~~~h~~~v~~~-~~s~~~~~l~-s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~ 508 (583)
|.+.+|.+. ++. ...+ ..|...+..+ .|+|+++.|+ +++.++ .+++|++.... .....+.....+..+
T Consensus 358 g~~~l~~~~~~~~-~~~l-----~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g-~~~~~l~~~~~~~~~ 430 (741)
T 2ecf_A 358 GFQHLYRIDSKGK-AAAL-----THGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQG-GQPQRLSKAPGMHSA 430 (741)
T ss_dssp SSCEEEEECSSSC-EEES-----CCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTC-CCCEECCCSCSEEEE
T ss_pred CccEEEEEcCCCC-eeee-----eecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCC-CCeeecccCCCceEE
Confidence 987777765 344 5555 5677788887 5999998775 445555 89999987532 445555556678899
Q ss_pred EeccCCcEEEEEeCC----ceEEEEEcccc
Q psy14906 509 RTHQESSMLAVCLDD----FTVNIIDIDTC 534 (583)
Q Consensus 509 ~~s~~~~~l~~~~~d----g~i~i~d~~~~ 534 (583)
+|+|||++|+....+ ..+++++...+
T Consensus 431 ~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 431 SFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp EECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred EECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 999999988876544 57899987643
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.97 E-value=7e-29 Score=258.39 Aligned_cols=357 Identities=8% Similarity=0.043 Sum_probs=243.7
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCc---ceEEEeeCCCCCEEEEEecC---------C
Q psy14906 117 ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS---CVNVLEPSPVVDIIGVGLSN---------K 184 (583)
Q Consensus 117 is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~s~~~~~l~~~~~d---------~ 184 (583)
++|||+++++ +.||+|++||+.+++....+. .+.. .|.+++|||||++|++++.+ +
T Consensus 24 ~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~-----------~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 24 WISDTEFIYR-EQKGTVRLWNVETNTSTVLIE-----------GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp BSSSSCBCCC-CSSSCEEEBCGGGCCCEEEEC-----------TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCS
T ss_pred EcCCCcEEEE-eCCCCEEEEECCCCcEEEEec-----------cccccccccceEEECCCCCEEEEEecCccceeeccee
Confidence 4999998877 789999999999998877665 4443 48999999999999998764 7
Q ss_pred eEEEEEccCCceeEEEe---ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccc-----------
Q psy14906 185 KIILHNILTDESLMEFI---QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKV----------- 250 (583)
Q Consensus 185 ~i~iw~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~----------- 250 (583)
.+.+||+.+++. ..+. .+...+..++|+|||+ .|+.++. +.|++||+.+++..... ..+...
T Consensus 92 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~-~la~~~~-~~i~~~~~~~g~~~~~~-~~~~~~~~~~g~~~~v~ 167 (723)
T 1xfd_A 92 YYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQ-QLIFIFE-NNIYYCAHVGKQAIRVV-STGKEGVIYNGLSDWLY 167 (723)
T ss_dssp EEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTT-CEEEEET-TEEEEESSSSSCCEEEE-CCCBTTTEEEEECCHHH
T ss_pred eEEEEECCCCce-EeccCCccccccccccEECCCCC-EEEEEEC-CeEEEEECCCCceEEEe-cCCCCCceECcccceeE
Confidence 888999998876 3343 3444588999999999 5666664 78999999988765544 333332
Q ss_pred -------eEEEEEecCCCEEEEEeCC-CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEE
Q psy14906 251 -------VTGAHFLYNEPLLVTSSPD-NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322 (583)
Q Consensus 251 -------v~~~~~~~~~~~l~s~~~d-~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 322 (583)
+.+++|+|||++|++++.+ +.+.+|++..... .+...+..+.|.+ +|.. ..+..|++|
T Consensus 168 ~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~G~~----~~~~~l~~~ 233 (723)
T 1xfd_A 168 EEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTG---------SIYPTVKPYHYPK-AGSE----NPSISLHVI 233 (723)
T ss_dssp HHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSS---------SSSCCCEEEECCB-TTSC----CCEEEEEEE
T ss_pred EEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCC---------cCCCcceeccCCC-CCCC----CCeeEEEEE
Confidence 3789999999999988754 4677886543211 1233577888875 5542 334589999
Q ss_pred EccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceee
Q psy14906 323 NTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFL 402 (583)
Q Consensus 323 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 402 (583)
|+.+++....+....
T Consensus 234 d~~~~~~~~~l~~~~----------------------------------------------------------------- 248 (723)
T 1xfd_A 234 GLNGPTHDLEMMPPD----------------------------------------------------------------- 248 (723)
T ss_dssp ESSSSCCCEECCCCC-----------------------------------------------------------------
T ss_pred ECCCCceeEEeeCCc-----------------------------------------------------------------
Confidence 988765433221000
Q ss_pred ecccccccCCCCceEEEEccCCcEEEEEec----CceEEEEEcccCccccccCCCCCCCcccCe----eEEEEeCCCcEE
Q psy14906 403 VPERCKQAKQSKPTCVYITHCGNFVLIGYS----SGHVDRFNIQSGAHRGSYGHDNQPGHVGGV----RGVVSDNLNQIV 474 (583)
Q Consensus 403 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v----~~~~~s~~~~~l 474 (583)
....+...+..++|+|||+++++... +..|++||+.+++....+. ..+...+ ..++|+|||+.|
T Consensus 249 ----~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~----~~~~~~~~~~~~~~~~spdg~~l 320 (723)
T 1xfd_A 249 ----DPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHE----DESEAWLHRQNEEPVFSKDGRKF 320 (723)
T ss_dssp ----CGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEE----EECSSCCCCCCCCCEECTTSCSE
T ss_pred ----cCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEE----eccCCEEeccCCCceEcCCCCeE
Confidence 00001145788999999998877653 3679999999888665541 1233333 378999999977
Q ss_pred EE--eecCC------cEEEEE-ccCCCCC--ceEEee-ccCCeee-EEeccCCcEEEEEeCC---ceEEEEEccccc--e
Q psy14906 475 IS--GGNDQ------TVKVWH-FKQTGKP--PLRSIK-LDNGISF-FRTHQESSMLAVCLDD---FTVNIIDIDTCT--I 536 (583)
Q Consensus 475 ~s--~~~dg------~i~iwd-~~~~~~~--~~~~~~-~~~~v~~-~~~s~~~~~l~~~~~d---g~i~i~d~~~~~--~ 536 (583)
+. ...++ .|.+|| ...+ . +...+. ....+.. ++|+|||+.|+..+.+ +.+++|++.... .
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~d~~~~~--~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~ 398 (723)
T 1xfd_A 321 FFIRAIPQGGRGKFYHITVSSSQPNS--SNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFN 398 (723)
T ss_dssp EEEEEECCSSSSCEEEEEEECSSCCS--SSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCC
T ss_pred EEEEecccCCCcceeEEEEEeccCCC--CccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCC
Confidence 75 44666 466677 3333 2 133333 3344554 6999999998876655 789999986432 3
Q ss_pred EEeecc---cccceeeEEecCCCcEEEEEeCC-C--eEEEEeCCCccc
Q psy14906 537 IRKLSG---HMGQLTDADFSPDSRWLITASMD-C--TIRVWDIPSSQL 578 (583)
Q Consensus 537 ~~~~~~---h~~~v~~l~~s~d~~~l~s~~~d-~--~i~vw~~~~~~~ 578 (583)
...+.. |...+..++|+|||++|+..... + ...+++..+++.
T Consensus 399 ~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~~~~~~~~ 446 (723)
T 1xfd_A 399 RQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKK 446 (723)
T ss_dssp CBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCE
T ss_pred cceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEEECCCCCE
Confidence 344543 67779999999999988765332 2 234455544443
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-27 Score=248.34 Aligned_cols=340 Identities=8% Similarity=0.039 Sum_probs=223.6
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEE-EEee-ccCC--ceEE---ecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccC
Q psy14906 121 GPHLISVDEESNVKVWDIKAEETY-LELS-FDND--TFKI---MGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILT 193 (583)
Q Consensus 121 ~~~l~s~~~dg~i~iwd~~~~~~~-~~~~-~~~~--~~~~---~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~ 193 (583)
|+.+++.+.|+ | +||+.+++.+ ..+. .... .+.. ....+...|.+++|+|| +.++.+ .++.|++||+.+
T Consensus 35 g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~ 110 (706)
T 2z3z_A 35 GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQGGLVGFDMLA 110 (706)
T ss_dssp TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETTEEEEEETTT
T ss_pred CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECCEEEEEECCC
Confidence 66777777777 8 9999998873 3322 1000 0000 00011256999999999 666665 459999999988
Q ss_pred CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC-----Ceehhhhhhccccc--------------eEEE
Q psy14906 194 DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED-----RQVENQIKKAHRKV--------------VTGA 254 (583)
Q Consensus 194 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~-----~~~~~~~~~~~~~~--------------v~~~ 254 (583)
++... +..+...+.+++|+|||+ .|+.+ .++.|++||+.+ ++..... ..+... +.++
T Consensus 111 ~~~~~-l~~~~~~~~~~~~SpdG~-~la~~-~~~~i~v~~~~~~~~~~g~~~~~~-~~~~~~~~~g~~~~~ee~~~~~~~ 186 (706)
T 2z3z_A 111 RKVTY-LFDTNEETASLDFSPVGD-RVAYV-RNHNLYIARGGKLGEGMSRAIAVT-IDGTETLVYGQAVHQREFGIEKGT 186 (706)
T ss_dssp TEEEE-EECCTTCCTTCEECTTSS-EEEEE-ETTEEEEEECBCTTSCCCCCEESC-SCCBTTEEESSCCGGGCTTCCCSE
T ss_pred CceEE-ccCCcccccCCcCCCCCC-EEEEE-ECCeEEEEecCcccccCCCcEEec-cCCCCCeEcccchhhhhcCCCceE
Confidence 76654 444557899999999999 66664 679999999998 7665444 233332 4889
Q ss_pred EEecCCCEEEEEe---------------------------------CCCeEEEEEccCCCCCceeeEEe--ccCCCCCee
Q psy14906 255 HFLYNEPLLVTSS---------------------------------PDNTLKLWIFDKADGNGRLLRIR--EGHSAPPNY 299 (583)
Q Consensus 255 ~~~~~~~~l~s~~---------------------------------~d~~i~~w~~~~~~~~~~~~~~~--~~~~~~v~~ 299 (583)
+|+|||++|++++ .+..|.+||++ .++..... ..|...+..
T Consensus 187 ~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~----~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 187 FWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLA----TGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp EECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETT----TTEEEECCCCSCTTCEEEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECC----CCceEeeccCCCCceeEee
Confidence 9999999999987 34678888664 22322222 246677899
Q ss_pred EEEeeCCCCEEEEeeCCC-----cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccccccc
Q psy14906 300 IQFYGNSSDNILSAAGDS-----TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDW 374 (583)
Q Consensus 300 ~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (583)
++|+| |++.|++++.++ .|++||+.+++....+...
T Consensus 263 ~~~sp-dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~-------------------------------------- 303 (706)
T 2z3z_A 263 LSWSP-DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVE-------------------------------------- 303 (706)
T ss_dssp EEECT-TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEE--------------------------------------
T ss_pred EEEEC-CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEc--------------------------------------
Confidence 99998 899999877665 8999998876322211000
Q ss_pred ccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc--CCcEEEEEecCceEEEEEcc-cCccccccC
Q psy14906 375 NNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH--CGNFVLIGYSSGHVDRFNIQ-SGAHRGSYG 451 (583)
Q Consensus 375 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~ 451 (583)
. .......+..++|+| ||++++++..+|.+++|.+. ++.....+
T Consensus 304 -------------------------------~-~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l- 350 (706)
T 2z3z_A 304 -------------------------------T-DKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQV- 350 (706)
T ss_dssp -------------------------------E-CSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEEC-
T ss_pred -------------------------------c-CCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEec-
Confidence 0 000001246789999 99999999999999999887 56666666
Q ss_pred CCCCCCcccCeeE-EEEeCCCcEEEEeec-CC----cEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCC--
Q psy14906 452 HDNQPGHVGGVRG-VVSDNLNQIVISGGN-DQ----TVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDD-- 523 (583)
Q Consensus 452 ~~~~~~h~~~v~~-~~~s~~~~~l~s~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-- 523 (583)
..|...+.. ++|+|+++.|+.++. ++ .|..||+.++ . ...+.+...+..++|+|||++++....+
T Consensus 351 ----~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~--~-~~~l~~~~~~~~~~~spdg~~l~~~~~~~~ 423 (706)
T 2z3z_A 351 ----TKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGG--K-TKDLTPESGMHRTQLSPDGSAIIDIFQSPT 423 (706)
T ss_dssp ----CCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCC--C-CEESCCSSSEEEEEECTTSSEEEEEEECSS
T ss_pred ----CCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCC--C-ceeccCCCceEEEEECCCCCEEEEEecCCC
Confidence 567777877 799999987765554 44 5666666665 3 4445566778999999999988876544
Q ss_pred --ceEEEEEccccceEEeecccccceeeEEec
Q psy14906 524 --FTVNIIDIDTCTIIRKLSGHMGQLTDADFS 553 (583)
Q Consensus 524 --g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s 553 (583)
+.|++||+.+++ ...+. +...+....+.
T Consensus 424 ~p~~i~l~d~~~~~-~~~~~-~~~~~~~~~~~ 453 (706)
T 2z3z_A 424 VPRKVTVTNIGKGS-HTLLE-AKNPDTGYAMP 453 (706)
T ss_dssp CSCEEEEEESSSCE-EEEEE-CC------CCC
T ss_pred CCcEEEEEECCCCe-Eeecc-ccchhhhcCCC
Confidence 569999998887 33333 33444444443
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-26 Score=216.19 Aligned_cols=282 Identities=11% Similarity=0.077 Sum_probs=203.1
Q ss_pred EEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC-CCeEEEEEccCCCCCcee-e
Q psy14906 210 LSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNGRL-L 287 (583)
Q Consensus 210 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~~~-~ 287 (583)
..|.+++..++++...++.|.+||+.+++....+ ..+...+ .++|+|+++++++++. ++.|.+||++. .+. .
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~----~~~~~ 76 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQI-TLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL----EPPKV 76 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEE-ECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS----SSCEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeE-EccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC----CceeE
Confidence 4566777757888999999999999999888777 4455566 9999999997766665 88999996652 333 5
Q ss_pred EEeccCCCCCeeEEEeeCCCCEEEEeeCCC---cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCcccee
Q psy14906 288 RIREGHSAPPNYIQFYGNSSDNILSAAGDS---TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQF 364 (583)
Q Consensus 288 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (583)
..+..+..+..+++|+| +++++++...++ .|.+||+.+++....+..
T Consensus 77 ~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~----------------------------- 126 (331)
T 3u4y_A 77 VAIQEGQSSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI----------------------------- 126 (331)
T ss_dssp EEEEECSSCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-----------------------------
T ss_pred EecccCCCCccceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-----------------------------
Confidence 55565666655599997 898888655553 899999987755433211
Q ss_pred eeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEE-ecCce-EEEEEcc
Q psy14906 365 SFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIG-YSSGH-VDRFNIQ 442 (583)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~-i~i~d~~ 442 (583)
...+..++|+|+|++++++ ..++. |.+|++.
T Consensus 127 -----------------------------------------------~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~ 159 (331)
T 3u4y_A 127 -----------------------------------------------PYDAVGIAISPNGNGLILIDRSSANTVRRFKID 159 (331)
T ss_dssp -----------------------------------------------CTTEEEEEECTTSSCEEEEEETTTTEEEEEEEC
T ss_pred -----------------------------------------------CCCccceEECCCCCEEEEEecCCCceEEEEEEC
Confidence 0346789999999866655 45577 9999987
Q ss_pred cCccccccCCCCCCCcccCeeEEEEeCCCcEEE-EeecCCcEEEEEccCCCCCc---eEEeeccCCeeeEEeccCCcEEE
Q psy14906 443 SGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI-SGGNDQTVKVWHFKQTGKPP---LRSIKLDNGISFFRTHQESSMLA 518 (583)
Q Consensus 443 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~~~dg~i~iwd~~~~~~~~---~~~~~~~~~v~~~~~s~~~~~l~ 518 (583)
......... .........+..++|+|++++++ ++..++.|++||+.++ +. +..+.....+..++|+|||++++
T Consensus 160 ~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~--~~~~~~~~~~~~~~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 160 ADGVLFDTG-QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNP--ENITLLNAVGTNNLPGTIVVSRDGSTVY 236 (331)
T ss_dssp TTCCEEEEE-EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSST--TSCEEEEEEECSSCCCCEEECTTSSEEE
T ss_pred CCCcEeecC-CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCC--cccceeeeccCCCCCceEEECCCCCEEE
Confidence 544321110 00013345589999999999655 4556899999999988 76 77777778899999999999777
Q ss_pred EEe-CCceEEEEEccccce--EEeeccc----ccc---eeeEEecCCCcEEEEEeC-CCeEEEEeCCCcc
Q psy14906 519 VCL-DDFTVNIIDIDTCTI--IRKLSGH----MGQ---LTDADFSPDSRWLITASM-DCTIRVWDIPSSQ 577 (583)
Q Consensus 519 ~~~-~dg~i~i~d~~~~~~--~~~~~~h----~~~---v~~l~~s~d~~~l~s~~~-d~~i~vw~~~~~~ 577 (583)
++. .++.|.+||+.+++. +..+..+ ... ...++|+||+++|++++. ++.|.+||+.+..
T Consensus 237 v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 237 VLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp EECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred EEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 665 478899999998877 3333322 222 345899999998866554 5699999998654
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.1e-27 Score=244.19 Aligned_cols=358 Identities=12% Similarity=0.060 Sum_probs=226.1
Q ss_pred eEEEeeCCCCCEEEEEecCCeEEEEEccCCcee-EEEeccC-----------------CCeEEEEEecCCCCEEEEEcCC
Q psy14906 165 VNVLEPSPVVDIIGVGLSNKKIILHNILTDESL-MEFIQTW-----------------GPVTALSFRTDGPPMMVSGSNT 226 (583)
Q Consensus 165 i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~~l~s~~~d 226 (583)
+..+.|. ++.+++++.++ | +||+.+++.+ ..+..+. ..|.+++|+|| ..++++ .+
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~--~~ 100 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF--TQ 100 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE--ET
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE--EC
Confidence 4456777 66777777777 8 9999999873 3333322 46999999999 524444 35
Q ss_pred CcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCC-CCCceeeEEeccCCC----------
Q psy14906 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA-DGNGRLLRIREGHSA---------- 295 (583)
Q Consensus 227 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~-~~~~~~~~~~~~~~~---------- 295 (583)
+.+++||+.+++..... .+...+.+++|+|||++|+++ .++.|.+|+++.. ...++.......+..
T Consensus 101 ~~i~~~d~~~~~~~~l~--~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 101 GGLVGFDMLARKVTYLF--DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQ 177 (706)
T ss_dssp TEEEEEETTTTEEEEEE--CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGG
T ss_pred CEEEEEECCCCceEEcc--CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhh
Confidence 89999999988765443 466778899999999999986 6899999977530 000222222222222
Q ss_pred ----CCeeEEEeeCCCCEEEEeeCC-CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccc
Q psy14906 296 ----PPNYIQFYGNSSDNILSAAGD-STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAR 370 (583)
Q Consensus 296 ----~v~~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (583)
.+.++.|+| |+++|++++.| ..+..+.+......... ......+..
T Consensus 178 ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~-------------------~~~~~y~~~--------- 228 (706)
T 2z3z_A 178 REFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAE-------------------SKPLYYPMA--------- 228 (706)
T ss_dssp GCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCE-------------------EEEECCCBT---------
T ss_pred hhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCc-------------------eEEeeCCCC---------
Confidence 258999998 89999988732 22222222111000000 000000000
Q ss_pred ccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCc-----eEEEEEcccCc
Q psy14906 371 EKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG-----HVDRFNIQSGA 445 (583)
Q Consensus 371 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~~~ 445 (583)
. ....+..+.+||+.......... ...+...+..++|+|||++|++++.++ .|++||+.+++
T Consensus 229 ----g----~~~~~~~l~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~ 295 (706)
T 2z3z_A 229 ----G----TPSHHVTVGIYHLATGKTVYLQT-----GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR 295 (706)
T ss_dssp ----T----SCCCEEEEEEEETTTTEEEECCC-----CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC
T ss_pred ----C----CCCCeeEEEEEECCCCceEeecc-----CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc
Confidence 0 01233568888887654321111 112335688999999999999987665 89999999884
Q ss_pred cccccCCCCCCCcccCeeEEEEeC--CCcEEEEeecCCcEEEEEccCCCCCceEEeec-cCCeee-EEeccCCcEEEEEe
Q psy14906 446 HRGSYGHDNQPGHVGGVRGVVSDN--LNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL-DNGISF-FRTHQESSMLAVCL 521 (583)
Q Consensus 446 ~~~~~~~~~~~~h~~~v~~~~~s~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~-~~~s~~~~~l~~~~ 521 (583)
....+...........+.+++|+| ||+++++++.|+.+++|.++... ..+..+.. ...+.. ++|+|+|+.|+.++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~-~~~~~l~~~~~~v~~~~~~spdg~~l~~~~ 374 (706)
T 2z3z_A 296 FVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG-RLIRQVTKGEWEVTNFAGFDPKGTRLYFES 374 (706)
T ss_dssp EEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTS-CEEEECCCSSSCEEEEEEECTTSSEEEEEE
T ss_pred eeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCC-CEEEecCCCCeEEEeeeEEcCCCCEEEEEe
Confidence 333321000011112346789999 99999999999999999987321 44444443 345666 79999999877655
Q ss_pred CC-c----eEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCC----CeEEEEeCCCcc
Q psy14906 522 DD-F----TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMD----CTIRVWDIPSSQ 577 (583)
Q Consensus 522 ~d-g----~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d----~~i~vw~~~~~~ 577 (583)
.+ + .|+.||+.+++ ...+. |...+.+++|||||++|+..+.+ +.|++||+.+++
T Consensus 375 ~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 375 TEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp SSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred cCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 54 3 67777877766 33444 67779999999999998876443 569999998876
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.7e-26 Score=211.88 Aligned_cols=281 Identities=12% Similarity=0.127 Sum_probs=200.4
Q ss_pred ccCCCE-EEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec-CCeEEEEEccCCc
Q psy14906 118 LPFGPH-LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS-NKKIILHNILTDE 195 (583)
Q Consensus 118 s~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d~~i~iw~~~~~~ 195 (583)
.+++++ +++.+.++.|.+||..+++.+..+. .+...+ .++|+|++++|++++. ++.|.+||+.+++
T Consensus 6 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~-----------~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~ 73 (331)
T 3u4y_A 6 QTTSNFGIVVEQHLRRISFFSTDTLEILNQIT-----------LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP 73 (331)
T ss_dssp -CCCCEEEEEEGGGTEEEEEETTTCCEEEEEE-----------CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS
T ss_pred cCCCCEEEEEecCCCeEEEEeCcccceeeeEE-----------ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 444554 6677788999999999999988876 445556 9999999997766655 8899999999998
Q ss_pred e-eEEEeccCCCeEEEEEecCCCCEEEEEcCCC---cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEE-eCCC
Q psy14906 196 S-LMEFIQTWGPVTALSFRTDGPPMMVSGSNTG---HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS-SPDN 270 (583)
Q Consensus 196 ~-~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~ 270 (583)
. ...+..+..+..+++|+|+++ +++++..++ .|.+||+.+++.+..+ .+.....+++|+|+|++++++ ..++
T Consensus 74 ~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~v~d~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~~ 150 (331)
T 3u4y_A 74 PKVVAIQEGQSSMADVDITPDDQ-FAVTVTGLNHPFNMQSYSFLKNKFISTI--PIPYDAVGIAISPNGNGLILIDRSSA 150 (331)
T ss_dssp CEEEEEEECSSCCCCEEECTTSS-EEEECCCSSSSCEEEEEETTTTEEEEEE--ECCTTEEEEEECTTSSCEEEEEETTT
T ss_pred eeEEecccCCCCccceEECCCCC-EEEEecCCCCcccEEEEECCCCCeEEEE--ECCCCccceEECCCCCEEEEEecCCC
Confidence 8 777777756665599999999 666555553 8999999999888776 234567899999999855554 5557
Q ss_pred e-EEEEEccCCCCCcee-eEEeccCCCCCeeEEEeeCCCCEEEEe-eCCCcEEEEEcccccc---ceeeccchhhhhhhh
Q psy14906 271 T-LKLWIFDKADGNGRL-LRIREGHSAPPNYIQFYGNSSDNILSA-AGDSTLRIFNTKSETS---NKNLGIASANRNNLK 344 (583)
Q Consensus 271 ~-i~~w~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~ 344 (583)
. +.+|+++........ ...+ .....+..++|+| ++++++.+ ..++.|.+||+.+++. ...+..
T Consensus 151 ~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~--------- 219 (331)
T 3u4y_A 151 NTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTP-DGNFAFVANLIGNSIGILETQNPENITLLNAVGT--------- 219 (331)
T ss_dssp TEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECT-TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC---------
T ss_pred ceEEEEEECCCCcEeecCCccc-cCCCCccceEECC-CCCEEEEEeCCCCeEEEEECCCCcccceeeeccC---------
Confidence 8 999988742111111 1222 3344578999997 78765554 4689999999987765 221100
Q ss_pred hhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCC
Q psy14906 345 RKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCG 424 (583)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 424 (583)
...+..++|+|||
T Consensus 220 -------------------------------------------------------------------~~~~~~~~~spdg 232 (331)
T 3u4y_A 220 -------------------------------------------------------------------NNLPGTIVVSRDG 232 (331)
T ss_dssp -------------------------------------------------------------------SSCCCCEEECTTS
T ss_pred -------------------------------------------------------------------CCCCceEEECCCC
Confidence 0356789999999
Q ss_pred cEEEEEe-cCceEEEEEcccCcc--ccccCCC--CCCCcccCeeEEEEeCCCcEEEEee-cCCcEEEEEccCC
Q psy14906 425 NFVLIGY-SSGHVDRFNIQSGAH--RGSYGHD--NQPGHVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQT 491 (583)
Q Consensus 425 ~~l~~~~-~dg~i~i~d~~~~~~--~~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~ 491 (583)
++++++. .++.|.+||+.+++. +..+... ...........++|+|++++|+.++ .++.|.+||+...
T Consensus 233 ~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 233 STVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp SEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred CEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 9877665 578899999998876 2222100 0011222335699999999886555 5679999999875
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=1e-25 Score=212.37 Aligned_cols=278 Identities=10% Similarity=0.111 Sum_probs=197.1
Q ss_pred EEEEEcCCCcEEEEeCC-CC--eehhhhhhccccceEEEEEecCCCEEEEEeCC-CeEEEEEccCCCCCceeeEEeccCC
Q psy14906 219 MMVSGSNTGHLTVWNLE-DR--QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD-NTLKLWIFDKADGNGRLLRIREGHS 294 (583)
Q Consensus 219 ~l~s~~~dg~i~vwd~~-~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-~~i~~w~~~~~~~~~~~~~~~~~~~ 294 (583)
++++++.++.|++||+. ++ +.+..+ .+...+.+++|+|++++|++++.+ +.+.+|+++...+....+..+..+.
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 84 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV--DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG 84 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE--ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC
Confidence 55566889999999995 33 333333 577789999999999998888876 9999998875444555555555544
Q ss_pred CCCeeEEEeeCCCCEEEEeeC-CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccc
Q psy14906 295 APPNYIQFYGNSSDNILSAAG-DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKD 373 (583)
Q Consensus 295 ~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (583)
.+..++|+| +++++++++. ++.|.+||+..+......
T Consensus 85 -~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~---------------------------------------- 122 (343)
T 1ri6_A 85 -SLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVV---------------------------------------- 122 (343)
T ss_dssp -CCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEE----------------------------------------
T ss_pred -CCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCcccccc----------------------------------------
Confidence 789999997 7887766654 888999998522111100
Q ss_pred cccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe-cCceEEEEEccc-Ccccc---
Q psy14906 374 WNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRFNIQS-GAHRG--- 448 (583)
Q Consensus 374 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~-~~~~~--- 448 (583)
... .....+.+++|+|+++++++++ .++.|.+||+.+ ++...
T Consensus 123 --------------~~~-------------------~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 169 (343)
T 1ri6_A 123 --------------DVV-------------------EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDP 169 (343)
T ss_dssp --------------EEE-------------------CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEE
T ss_pred --------------ccc-------------------cCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecc
Confidence 000 0013477899999999888877 899999999987 54422
Q ss_pred -ccCCCCCCCcccCeeEEEEeCCCcEEEEe-ecCCcEEEEEccCCCCCc--eEEeec-------cCCeeeEEeccCCcEE
Q psy14906 449 -SYGHDNQPGHVGGVRGVVSDNLNQIVISG-GNDQTVKVWHFKQTGKPP--LRSIKL-------DNGISFFRTHQESSML 517 (583)
Q Consensus 449 -~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~--~~~~~~-------~~~v~~~~~s~~~~~l 517 (583)
.+. ......+..++|+|++++++.+ ..++.|.+|++.....+. ...... ...+..++|+|+|++|
T Consensus 170 ~~~~----~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l 245 (343)
T 1ri6_A 170 AEVT----TVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHL 245 (343)
T ss_dssp EEEE----CSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEE
T ss_pred cccc----cCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEE
Confidence 111 1234578899999999977555 478999999996421132 222221 1245679999999988
Q ss_pred EEEe-CCceEEEEEcc----ccceEEeecccccceeeEEecCCCcEEEEEe-CCCeEEEEeC--CCccc
Q psy14906 518 AVCL-DDFTVNIIDID----TCTIIRKLSGHMGQLTDADFSPDSRWLITAS-MDCTIRVWDI--PSSQL 578 (583)
Q Consensus 518 ~~~~-~dg~i~i~d~~----~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~-~d~~i~vw~~--~~~~~ 578 (583)
+++. .++.|.+||+. +.+.+..+..+.. +..++|+||+++|++++ .|+.|.+|++ .+|++
T Consensus 246 ~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 246 YACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 313 (343)
T ss_dssp EEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred EEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCcee
Confidence 7554 78999999998 3345555655544 89999999999888887 6899999954 46643
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.95 E-value=8.7e-27 Score=242.60 Aligned_cols=318 Identities=8% Similarity=-0.042 Sum_probs=223.7
Q ss_pred cceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCC---CeEEEEEecCCCCEEEEEcCC---------CcEE
Q psy14906 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWG---PVTALSFRTDGPPMMVSGSNT---------GHLT 230 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~s~~~d---------g~i~ 230 (583)
..+.+++|+|||+++++ +.||+|++||+.+++....+..|.. .|.+++|+|||+ .|++++.+ +.+.
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~-~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDRE-YALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSS-EEEEEESCCCCSSSCCCSEEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCC-EEEEEecCccceeecceeeEE
Confidence 44678999999997766 7899999999999998888877754 499999999999 77777653 7788
Q ss_pred EEeCCCCee--hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCC-----------
Q psy14906 231 VWNLEDRQV--ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP----------- 297 (583)
Q Consensus 231 vwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v----------- 297 (583)
+||+.+++. +... .+|...+..++|+|||+.|+.++. +.|.+|+++. ++.......+...+
T Consensus 95 ~~d~~~~~~~~l~~~-~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~----g~~~~~~~~~~~~~~~~g~~~~v~~ 168 (723)
T 1xfd_A 95 LSKIPHGDPQSLDPP-EVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVG----KQAIRVVSTGKEGVIYNGLSDWLYE 168 (723)
T ss_dssp EEESSSCCCEECCCT-TCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSS----SCCEEEECCCBTTTEEEEECCHHHH
T ss_pred EEECCCCceEeccCC-ccccccccccEECCCCCEEEEEEC-CeEEEEECCC----CceEEEecCCCCCceECcccceeEE
Confidence 999998875 2222 345556889999999999999885 7899996542 23333333333333
Q ss_pred -------eeEEEeeCCCCEEEEeeCC-CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecc
Q psy14906 298 -------NYIQFYGNSSDNILSAAGD-STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLA 369 (583)
Q Consensus 298 -------~~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (583)
.+++|+| |+++|++++.+ +.+.+|++......
T Consensus 169 ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~--------------------------------------- 208 (723)
T 1xfd_A 169 EEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGS--------------------------------------- 208 (723)
T ss_dssp HTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSS---------------------------------------
T ss_pred EEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCc---------------------------------------
Confidence 7899998 89999888754 45666665321100
Q ss_pred cccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccc
Q psy14906 370 REKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGS 449 (583)
Q Consensus 370 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 449 (583)
....+..+.+.++|.. ..+..|++||+.+++....
T Consensus 209 -----------------------------------------~~~~~~~~~~~~~G~~----~~~~~l~~~d~~~~~~~~~ 243 (723)
T 1xfd_A 209 -----------------------------------------IYPTVKPYHYPKAGSE----NPSISLHVIGLNGPTHDLE 243 (723)
T ss_dssp -----------------------------------------SSCCCEEEECCBTTSC----CCEEEEEEEESSSSCCCEE
T ss_pred -----------------------------------------CCCcceeccCCCCCCC----CCeeEEEEEECCCCceeEE
Confidence 0023667777777753 3456899999998876555
Q ss_pred cCCC-CCCCcccCeeEEEEeCCCcEEEEeec----CCcEEEEEccCCCCCceEEeec--cCCe----eeEEeccCCcEEE
Q psy14906 450 YGHD-NQPGHVGGVRGVVSDNLNQIVISGGN----DQTVKVWHFKQTGKPPLRSIKL--DNGI----SFFRTHQESSMLA 518 (583)
Q Consensus 450 ~~~~-~~~~h~~~v~~~~~s~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~--~~~v----~~~~~s~~~~~l~ 518 (583)
+... ....+...+..++|+|||++|++... +..|++||+.++ ++...+.. ...+ ..++|+|||+.|+
T Consensus 244 l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g--~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~ 321 (723)
T 1xfd_A 244 MMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTG--VCTKKHEDESEAWLHRQNEEPVFSKDGRKFF 321 (723)
T ss_dssp CCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTC--CEEEEEEEECSSCCCCCCCCCEECTTSCSEE
T ss_pred eeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCC--cceEEEEeccCCEEeccCCCceEcCCCCeEE
Confidence 5210 00123678999999999998877653 357999999887 65554432 2333 3889999999777
Q ss_pred E--EeCCc------eEEEEE-ccccc--eEEeecccccceee-EEecCCCcEEEEEeCC---CeEEEEeCCC
Q psy14906 519 V--CLDDF------TVNIID-IDTCT--IIRKLSGHMGQLTD-ADFSPDSRWLITASMD---CTIRVWDIPS 575 (583)
Q Consensus 519 ~--~~~dg------~i~i~d-~~~~~--~~~~~~~h~~~v~~-l~~s~d~~~l~s~~~d---~~i~vw~~~~ 575 (583)
. +..++ .|++|| ..+++ ....+..+...+.. ++|+|||++|+..+.+ +.+++|++..
T Consensus 322 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 322 FIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp EEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred EEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 5 44566 577777 34444 14555544444554 6999999999866655 7899999864
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.1e-26 Score=215.28 Aligned_cols=279 Identities=9% Similarity=-0.004 Sum_probs=209.8
Q ss_pred CEEEEEecCCeEEEEEccCCceeEEEeccCC--CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhcc----c
Q psy14906 175 DIIGVGLSNKKIILHNILTDESLMEFIQTWG--PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAH----R 248 (583)
Q Consensus 175 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~----~ 248 (583)
++|++++.++.|.+||+.+++.+..+..... .+..++|+|+++.+++++..++.|.+||+.+++.+..+..++ .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4788999999999999999999888875422 588999999998566777778999999999988776663222 2
Q ss_pred cceEEEEEecCCCEEEEEe------------CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC
Q psy14906 249 KVVTGAHFLYNEPLLVTSS------------PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD 316 (583)
Q Consensus 249 ~~v~~~~~~~~~~~l~s~~------------~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 316 (583)
..+..++|+|+|+++++++ .++.|.+||++ ..+....+.. ...+..++|+| ++++|+++ +
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~----~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~--~ 153 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE----TLSRRKAFEA-PRQITMLAWAR-DGSKLYGL--G 153 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETT----TTEEEEEEEC-CSSCCCEEECT-TSSCEEEE--S
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECC----CCcEEEEEeC-CCCcceeEECC-CCCEEEEe--C
Confidence 3677899999999988886 57999999764 3455555543 44678899997 78888877 6
Q ss_pred CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccc
Q psy14906 317 STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSK 396 (583)
Q Consensus 317 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 396 (583)
+.|.+||+.+++....+.....
T Consensus 154 ~~i~~~d~~~~~~~~~~~~~~~---------------------------------------------------------- 175 (337)
T 1pby_B 154 RDLHVMDPEAGTLVEDKPIQSW---------------------------------------------------------- 175 (337)
T ss_dssp SSEEEEETTTTEEEEEECSTTT----------------------------------------------------------
T ss_pred CeEEEEECCCCcEeeeeecccc----------------------------------------------------------
Confidence 8999999988765543321100
Q ss_pred ccceeeecccccccCCCCceEEEEccCCcEEEEEecC------------------------ceEEEEEcccCccccccCC
Q psy14906 397 MDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS------------------------GHVDRFNIQSGAHRGSYGH 452 (583)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------------------------g~i~i~d~~~~~~~~~~~~ 452 (583)
...+.++|+++.+++.... ..|.+||+.+++.. .+..
T Consensus 176 ------------------~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~ 236 (337)
T 1pby_B 176 ------------------EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREV 236 (337)
T ss_dssp ------------------TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEE
T ss_pred ------------------CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-Eeec
Confidence 0001233443333222211 15889999988765 2211
Q ss_pred CCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEcc
Q psy14906 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 453 ~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 532 (583)
..+...+.+++|+|++++++++ ++.|.+||+.++ +.+..+.....+.+++|+|+|++|++++.++.|++||+.
T Consensus 237 ---~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 237 ---RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN--ASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp ---EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT--EEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred ---CCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC--cCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECc
Confidence 3456678899999999998888 689999999987 777777777789999999999999999999999999999
Q ss_pred ccceEEeeccccc
Q psy14906 533 TCTIIRKLSGHMG 545 (583)
Q Consensus 533 ~~~~~~~~~~h~~ 545 (583)
+++.+..+..+..
T Consensus 310 ~~~~~~~~~~~~~ 322 (337)
T 1pby_B 310 TLEKKGQVDLPGN 322 (337)
T ss_dssp TCCEEEEEECGGG
T ss_pred CCcEEEEEEcCCC
Confidence 9998888775533
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=9.7e-26 Score=212.49 Aligned_cols=304 Identities=15% Similarity=0.184 Sum_probs=202.5
Q ss_pred CEEEE-EeCCCcEEEEEcC-CCc--EEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC-CeEEEEEcc--CC
Q psy14906 122 PHLIS-VDEESNVKVWDIK-AEE--TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN-KKIILHNIL--TD 194 (583)
Q Consensus 122 ~~l~s-~~~dg~i~iwd~~-~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-~~i~iw~~~--~~ 194 (583)
+++++ ++.|+.|++||+. +++ .+..+ .+...+.+++|+|++++|++++.+ +.|.+|++. ++
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~ 72 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVV------------DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDG 72 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEE------------ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeE------------ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCC
Confidence 34444 4779999999996 342 22222 556788899999999999888876 899999997 55
Q ss_pred c--eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC---CCeehhhhhhccccceEEEEEecCCCEEEEEe-C
Q psy14906 195 E--SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE---DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS-P 268 (583)
Q Consensus 195 ~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~ 268 (583)
+ .+..+..+ ..+..++|+|+++++++++..++.|.+||+. ..+....+ . ....+.+++|+|+++++++++ .
T Consensus 73 ~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~-~~~~~~~~~~s~dg~~l~~~~~~ 149 (343)
T 1ri6_A 73 ALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV-E-GLDGCHSANISPDNRTLWVPALK 149 (343)
T ss_dssp CEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE-C-CCTTBCCCEECTTSSEEEEEEGG
T ss_pred ceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc-c-CCCCceEEEECCCCCEEEEecCC
Confidence 4 33445555 4889999999999444555568899999994 33444444 2 334688999999999888877 8
Q ss_pred CCeEEEEEccCCCCCceeeE--Eecc-CCCCCeeEEEeeCCCCEEEEe-eCCCcEEEEEccc--cccceeeccchhhhhh
Q psy14906 269 DNTLKLWIFDKADGNGRLLR--IREG-HSAPPNYIQFYGNSSDNILSA-AGDSTLRIFNTKS--ETSNKNLGIASANRNN 342 (583)
Q Consensus 269 d~~i~~w~~~~~~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~ 342 (583)
++.|.+|+++.. +...... .... ....+..++|+| ++++++++ ..++.+.+|++.. +......
T Consensus 150 ~~~v~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p-dg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~--------- 218 (343)
T 1ri6_A 150 QDRICLFTVSDD-GHLVAQDPAEVTTVEGAGPRHMVFHP-NEQYAYCVNELNSSVDVWELKDPHGNIECVQ--------- 218 (343)
T ss_dssp GTEEEEEEECTT-SCEEEEEEEEEECSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEESSCTTSCCEEEE---------
T ss_pred CCEEEEEEecCC-CceeeecccccccCCCCCcceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEEe---------
Confidence 899999987531 1222222 2222 334678899997 78866555 4789999999853 2110000
Q ss_pred hhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc
Q psy14906 343 LKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH 422 (583)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 422 (583)
..... +.. ......+..++|+|
T Consensus 219 ----------------------------------------------~~~~~----------~~~--~~~~~~~~~i~~s~ 240 (343)
T 1ri6_A 219 ----------------------------------------------TLDMM----------PEN--FSDTRWAADIHITP 240 (343)
T ss_dssp ----------------------------------------------EEECS----------CTT--CCSCCCEEEEEECT
T ss_pred ----------------------------------------------ecccc----------Ccc--ccccCCccceEECC
Confidence 00000 000 00013567899999
Q ss_pred CCcEEEEEe-cCceEEEEEcc--cC--ccccccCCCCCCCcccCeeEEEEeCCCcEEEEee-cCCcEEEEEcc--CCCCC
Q psy14906 423 CGNFVLIGY-SSGHVDRFNIQ--SG--AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFK--QTGKP 494 (583)
Q Consensus 423 ~~~~l~~~~-~dg~i~i~d~~--~~--~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~--~~~~~ 494 (583)
++++++++. .++.|.+||+. ++ +....+ ..+. .+.+++|+|++++|++++ .++.|.+|+++ ++..+
T Consensus 241 dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~-----~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~ 314 (343)
T 1ri6_A 241 DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ-----PTET-QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLH 314 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE-----ECSS-SCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEE
T ss_pred CCCEEEEEecCCCEEEEEEEcCCCCceEEeeee-----cCCC-ccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceee
Confidence 998887554 78999999998 22 233333 2233 388999999999888777 68999999665 33112
Q ss_pred ceEEeeccCCeeeEEeccCCc
Q psy14906 495 PLRSIKLDNGISFFRTHQESS 515 (583)
Q Consensus 495 ~~~~~~~~~~v~~~~~s~~~~ 515 (583)
.+..+.......+++|.|+.+
T Consensus 315 ~~~~~~~g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 315 EKGRYAVGQGPMWVVVNAHEG 335 (343)
T ss_dssp EEEEEECSSSCCEEEEEEEC-
T ss_pred EccccccCCCCeeEEEEcccC
Confidence 334444445677777777543
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=5.9e-25 Score=208.02 Aligned_cols=277 Identities=9% Similarity=0.005 Sum_probs=216.4
Q ss_pred CcceEEEeeCCCCCEEEEEec-------CCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLS-------NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL 234 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~-------d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 234 (583)
...+..++|+|++++|++++. ++.|.+||..+++.+..+... ..+..++|+|+++.++++...++.|.+||.
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 456789999999999888774 568999999999998888765 568899999999856667777899999999
Q ss_pred CCCeehhhhhhcccc--------ceEEEEEecCCCEEEEEe--CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEee
Q psy14906 235 EDRQVENQIKKAHRK--------VVTGAHFLYNEPLLVTSS--PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304 (583)
Q Consensus 235 ~~~~~~~~~~~~~~~--------~v~~~~~~~~~~~l~s~~--~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 304 (583)
.+++.+..+..++.. .+.+++|+|+++++++++ .++.|.+||.+ ..+....+..+...+..++|+|
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~----~~~~~~~~~~~~~~~~~~~~s~ 194 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGG----NIKLKTAIQNTGKMSTGLALDS 194 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETT----TTEEEEEECCCCTTCCCCEEET
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCC----CCceEEEecCCCCccceEEECC
Confidence 999887776322211 278899999999877776 47889999664 4566666665666688999997
Q ss_pred CCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCC
Q psy14906 305 NSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGK 384 (583)
Q Consensus 305 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (583)
+++++++++.++.+.+||+.+++....+....
T Consensus 195 -dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~----------------------------------------------- 226 (353)
T 3vgz_A 195 -EGKRLYTTNADGELITIDTADNKILSRKKLLD----------------------------------------------- 226 (353)
T ss_dssp -TTTEEEEECTTSEEEEEETTTTEEEEEEECCC-----------------------------------------------
T ss_pred -CCCEEEEEcCCCeEEEEECCCCeEEEEEEcCC-----------------------------------------------
Confidence 89999999999999999998876544321100
Q ss_pred ceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec-CceEEEEEcccCccccccCCCCCCCcccCee
Q psy14906 385 NKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS-SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVR 463 (583)
Q Consensus 385 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~ 463 (583)
..+...+..++++|++++++++.. ++.|.+||..+++....+.. .. ..
T Consensus 227 ------------------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~-----~~--~~ 275 (353)
T 3vgz_A 227 ------------------------DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA-----PE--SL 275 (353)
T ss_dssp ------------------------SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC-----SS--CC
T ss_pred ------------------------CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc-----CC--Cc
Confidence 001145778999999998777665 49999999999988777632 21 25
Q ss_pred EEEEeCCCcEEEEee-cCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCc
Q psy14906 464 GVVSDNLNQIVISGG-NDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDF 524 (583)
Q Consensus 464 ~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 524 (583)
.++|+|++++++.++ .++.|.+||..++ +.+..+.....+..++|+|+|++|+++..++
T Consensus 276 ~~~~s~dg~~l~v~~~~~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 276 AVLFNPARNEAYVTHRQAGKVSVIDAKSY--KVVKTFDTPTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEEETTTT--EEEEEEECCSEEEEEEECTTSCEEEEEEECC
T ss_pred eEEECCCCCEEEEEECCCCeEEEEECCCC--eEEEEEecCCCCCeEEEcCCCCEEEEEEccc
Confidence 799999999665544 7899999999988 7888888888899999999999887776653
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-24 Score=203.10 Aligned_cols=273 Identities=9% Similarity=0.046 Sum_probs=208.4
Q ss_pred CCeEEEEEecCCCCEEEEEcC-------CCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEE-EeCCCeEEEEE
Q psy14906 205 GPVTALSFRTDGPPMMVSGSN-------TGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT-SSPDNTLKLWI 276 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~-------dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~d~~i~~w~ 276 (583)
..+..++|+|+++ .+++++. ++.|.+||..+++.+..+ . ....+..++|+|++++++. ...++.|.+||
T Consensus 41 ~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~-~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 41 KGAYEMAYSQQEN-ALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI-H-NDLKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp SSEEEEEEETTTT-EEEEEECCCTTTEESEEEEEECTTTCCEEEEE-E-ESSCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCccceEECCCCC-EEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE-e-cCCCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 5788999999998 5555553 568999999999888777 2 3455788999999995554 45579999996
Q ss_pred ccCCCCCceeeEEeccCCCC---------CeeEEEeeCCCCEEEEee--CCCcEEEEEccccccceeeccchhhhhhhhh
Q psy14906 277 FDKADGNGRLLRIREGHSAP---------PNYIQFYGNSSDNILSAA--GDSTLRIFNTKSETSNKNLGIASANRNNLKR 345 (583)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 345 (583)
.. .++.+..+..+... +..++|+| +++++++++ .++.|.+||..+++....+..
T Consensus 118 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~---------- 182 (353)
T 3vgz_A 118 AK----TGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQN---------- 182 (353)
T ss_dssp TT----TCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEECC----------
T ss_pred CC----CCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEecC----------
Confidence 64 34455555443322 57899997 788777665 478899999987765433210
Q ss_pred hcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCc
Q psy14906 346 KNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGN 425 (583)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 425 (583)
....+..++++|+++
T Consensus 183 -----------------------------------------------------------------~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 183 -----------------------------------------------------------------TGKMSTGLALDSEGK 197 (353)
T ss_dssp -----------------------------------------------------------------CCTTCCCCEEETTTT
T ss_pred -----------------------------------------------------------------CCCccceEEECCCCC
Confidence 003467889999999
Q ss_pred EEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec-CCcEEEEEccCCCCCceEEeeccCC
Q psy14906 426 FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN-DQTVKVWHFKQTGKPPLRSIKLDNG 504 (583)
Q Consensus 426 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~ 504 (583)
+++++..++.|.+||..+++....+.... .++...+.+++|+|++++++.++. ++.|.+||+.++ +.+..+....+
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~--~~~~~~~~~~~ 274 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKILSRKKLLD-DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG--NILAKVAAPES 274 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCC-SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC--CEEEEEECSSC
T ss_pred EEEEEcCCCeEEEEECCCCeEEEEEEcCC-CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC--cEEEEEEcCCC
Confidence 99999999999999999998877663210 235667889999999997766654 589999999988 77777766554
Q ss_pred eeeEEeccCCcEEEEEe-CCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCC
Q psy14906 505 ISFFRTHQESSMLAVCL-DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMD 565 (583)
Q Consensus 505 v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d 565 (583)
..++|+|+|++++++. .++.|.+||..+++.+..+..+ ..+.+++|+|||++|+.+..+
T Consensus 275 -~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 275 -LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp -CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred -ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 6799999999766665 6899999999999988887754 468999999999987766655
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-25 Score=208.53 Aligned_cols=270 Identities=8% Similarity=-0.008 Sum_probs=201.5
Q ss_pred EEEEEcCCCcEEEEeCCCCeehhhhhhcccc-ceEEEEEecCCCEE-EEEeCCCeEEEEEccCCCCCceeeEEecc-C--
Q psy14906 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRK-VVTGAHFLYNEPLL-VTSSPDNTLKLWIFDKADGNGRLLRIREG-H-- 293 (583)
Q Consensus 219 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l-~s~~~d~~i~~w~~~~~~~~~~~~~~~~~-~-- 293 (583)
++++++.++.|.+||+.+++.+..+..++.. .+..++|+|+++++ +++..++.|.+||+. .++.+..+.. +
T Consensus 3 ~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~----~~~~~~~~~~~~~~ 78 (337)
T 1pby_B 3 YILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLV----TGETLGRIDLSTPE 78 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETT----TCCEEEEEECCBTT
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECC----CCCeEeeEEcCCcc
Confidence 7889999999999999999888777323322 47889999999865 455567899999764 3344444332 1
Q ss_pred --CCCCeeEEEeeCCCCEEEEee------------CCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCC
Q psy14906 294 --SAPPNYIQFYGNSSDNILSAA------------GDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILP 359 (583)
Q Consensus 294 --~~~v~~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (583)
...+..++|+| ++++++++. .++.|.+||+.+++....+..
T Consensus 79 ~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~------------------------ 133 (337)
T 1pby_B 79 ERVKSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA------------------------ 133 (337)
T ss_dssp EEEECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC------------------------
T ss_pred cccccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC------------------------
Confidence 22678899997 788888886 578999999876654332210
Q ss_pred ccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEE
Q psy14906 360 PVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRF 439 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~ 439 (583)
...+..++|+|++++++++ ++.|++|
T Consensus 134 ----------------------------------------------------~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 134 ----------------------------------------------------PRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp ----------------------------------------------------CSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred ----------------------------------------------------CCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 0346788999999988888 6889999
Q ss_pred EcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCC------------------------cEEEEEccCCCCCc
Q psy14906 440 NIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ------------------------TVKVWHFKQTGKPP 495 (583)
Q Consensus 440 d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg------------------------~i~iwd~~~~~~~~ 495 (583)
|+.+++....+... .+..+ +.|+|+++.++..+.++ .|.+||+.++ +.
T Consensus 160 d~~~~~~~~~~~~~---~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~--~~ 231 (337)
T 1pby_B 160 DPEAGTLVEDKPIQ---SWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG--EM 231 (337)
T ss_dssp ETTTTEEEEEECST---TTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC--CE
T ss_pred ECCCCcEeeeeecc---ccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCC--Cc
Confidence 99998877666321 11122 37899988665544332 4689999887 44
Q ss_pred e-E-EeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 496 L-R-SIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 496 ~-~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
. . ...+...+..++|+|+|++++++ ++.|++||+.+++.+..+.. ...+.+++|+||+++|++++.++.|++||+
T Consensus 232 ~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 232 AMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred eEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 3 1 11233467889999999999988 68999999999988877764 356889999999999999999999999999
Q ss_pred CCccccccc
Q psy14906 574 PSSQLIDCF 582 (583)
Q Consensus 574 ~~~~~~~~~ 582 (583)
.+++.++.+
T Consensus 309 ~~~~~~~~~ 317 (337)
T 1pby_B 309 ETLEKKGQV 317 (337)
T ss_dssp TTCCEEEEE
T ss_pred cCCcEEEEE
Confidence 999887765
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.94 E-value=9.7e-25 Score=201.04 Aligned_cols=255 Identities=13% Similarity=0.138 Sum_probs=188.9
Q ss_pred EEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC-CCCCeeE
Q psy14906 222 SGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH-SAPPNYI 300 (583)
Q Consensus 222 s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~-~~~v~~~ 300 (583)
.++.++.|++||+.+++.... ..|...+.+++|+|++++|++++ ++.|.+|+++.. .+.......+ ...+.++
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~--~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~ 90 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVV--WQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGD---PSPEKVDTGFATICNNDH 90 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEE--EEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSC---CSCEECCCTTCCCBCSCC
T ss_pred CCCcceeEEEEeCCCCceeee--ccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCC---CCceEeccccccccccce
Confidence 345788999999998887644 36889999999999999999987 789999976530 3333444444 3678899
Q ss_pred EEeeCCCCEEEEee--CCCcEEEEEcc--ccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccccccccc
Q psy14906 301 QFYGNSSDNILSAA--GDSTLRIFNTK--SETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNN 376 (583)
Q Consensus 301 ~~~~~~~~~l~~~~--~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (583)
+|+| ++++|++++ .++...+|.+. ++.. ..+.
T Consensus 91 ~~sp-dg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~------------------------------------------ 126 (297)
T 2ojh_A 91 GISP-DGALYAISDKVEFGKSAIYLLPSTGGTP-RLMT------------------------------------------ 126 (297)
T ss_dssp EECT-TSSEEEEEECTTTSSCEEEEEETTCCCC-EECC------------------------------------------
T ss_pred EECC-CCCEEEEEEeCCCCcceEEEEECCCCce-EEee------------------------------------------
Confidence 9997 899999988 34556666553 2221 1100
Q ss_pred EEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEE-EEecCceEEEEEccc-CccccccCCCC
Q psy14906 377 IAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVL-IGYSSGHVDRFNIQS-GAHRGSYGHDN 454 (583)
Q Consensus 377 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~i~i~d~~~-~~~~~~~~~~~ 454 (583)
....+..++|+|++++++ ++..++.+.+|++.. +.....+
T Consensus 127 ----------------------------------~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~---- 168 (297)
T 2ojh_A 127 ----------------------------------KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRL---- 168 (297)
T ss_dssp ----------------------------------SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEEC----
T ss_pred ----------------------------------cCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEc----
Confidence 002367889999999887 677889899998642 2223333
Q ss_pred CCCcccCeeEEEEeCCCcEEEEee-cCCcEEEEEccCCCCCceEEe-eccCCeeeEEeccCCcEEEEEeCC---------
Q psy14906 455 QPGHVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRTHQESSMLAVCLDD--------- 523 (583)
Q Consensus 455 ~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d--------- 523 (583)
..|...+.+++|+|++++|+.++ .++.+++|++.... .....+ .+...+..++|+|+|++|++++.+
T Consensus 169 -~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 246 (297)
T 2ojh_A 169 -THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG-SSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRD 246 (297)
T ss_dssp -CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-SCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSS
T ss_pred -ccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC-CCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCccccc
Confidence 56778899999999999887666 58999999987332 333333 344578899999999999888765
Q ss_pred --ceEEEEEccccce--EEeecccccceeeEEecCCCcEEEEEeCCC
Q psy14906 524 --FTVNIIDIDTCTI--IRKLSGHMGQLTDADFSPDSRWLITASMDC 566 (583)
Q Consensus 524 --g~i~i~d~~~~~~--~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~ 566 (583)
+.|++||+++++. +..+.+|...+.+++|+||+++|++++.|.
T Consensus 247 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 247 LDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 6799999998865 444557888999999999999999887664
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.4e-25 Score=202.24 Aligned_cols=256 Identities=7% Similarity=-0.016 Sum_probs=191.1
Q ss_pred EeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccC-CceeEEEecc-C
Q psy14906 127 VDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILT-DESLMEFIQT-W 204 (583)
Q Consensus 127 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~-~~~~~~~~~~-~ 204 (583)
.+.|+.|++||+.+++..... .|...+.+++|+|++++|++++ ++.|++||+.+ ++.......+ .
T Consensus 18 ~~~~~~i~~~d~~~~~~~~~~------------~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~ 84 (297)
T 2ojh_A 18 GSMRSSIEIFNIRTRKMRVVW------------QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFAT 84 (297)
T ss_dssp CCCCEEEEEEETTTTEEEEEE------------EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCC
T ss_pred CCcceeEEEEeCCCCceeeec------------cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccccc
Confidence 356899999999998866443 6788999999999999999986 78999999998 8777666555 3
Q ss_pred CCeEEEEEecCCCCEEEEEc--CCCcEEE--EeCCCCeehhhhhhccccceEEEEEecCCCEEE-EEeCCCeEEEEEccC
Q psy14906 205 GPVTALSFRTDGPPMMVSGS--NTGHLTV--WNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV-TSSPDNTLKLWIFDK 279 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~--~dg~i~v--wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~i~~w~~~~ 279 (583)
..+.+++|+|+++ +|++++ .++...+ |+..+++ ...+ .+...+..++|+|++++|+ +++.++.+++|+++.
T Consensus 85 ~~~~~~~~spdg~-~l~~~~~~~~~~~~l~~~~~~~~~-~~~~--~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 85 ICNNDHGISPDGA-LYAISDKVEFGKSAIYLLPSTGGT-PRLM--TKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp CBCSCCEECTTSS-EEEEEECTTTSSCEEEEEETTCCC-CEEC--CSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred ccccceEECCCCC-EEEEEEeCCCCcceEEEEECCCCc-eEEe--ecCCCccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence 6789999999999 777777 3344555 4555544 3333 2333588999999999877 777899999998876
Q ss_pred CCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee-CCCcEEEEEccc-cccceeeccchhhhhhhhhhcchhccccccC
Q psy14906 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA-GDSTLRIFNTKS-ETSNKNLGIASANRNNLKRKNRLEKMNEKFI 357 (583)
Q Consensus 280 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (583)
.. .....+..+...+.+++|+| +++.|+.++ .++.+++|++.. +.....+.
T Consensus 161 ~~---~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~----------------------- 213 (297)
T 2ojh_A 161 DS---GVETRLTHGEGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERIT----------------------- 213 (297)
T ss_dssp TT---CCEEECCCSSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECC-----------------------
T ss_pred CC---CcceEcccCCCccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEe-----------------------
Confidence 43 23455667778899999997 788777665 589999998762 22211110
Q ss_pred CCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC----
Q psy14906 358 LPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS---- 433 (583)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---- 433 (583)
.+...+..++|+|++++|++++.+
T Consensus 214 ----------------------------------------------------~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 241 (297)
T 2ojh_A 214 ----------------------------------------------------DSAYGDWFPHPSPSGDKVVFVSYDADVF 241 (297)
T ss_dssp ----------------------------------------------------CCSEEEEEEEECTTSSEEEEEEEETTCC
T ss_pred ----------------------------------------------------cCCcccCCeEECCCCCEEEEEEcCCCCC
Confidence 001347789999999999888765
Q ss_pred -------ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCC
Q psy14906 434 -------GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ 481 (583)
Q Consensus 434 -------g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg 481 (583)
+.|++||+.+++....... .+|...+.+++|+|++++|++++.+.
T Consensus 242 ~~~~~~~~~l~~~d~~~~~~~~~~~~---~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 242 DHPRDLDVRVQLMDMDGGNVETLFDL---FGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SCCSSEEEEEEEEETTSCSCEEEEEE---EESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cccccCceEEEEEecCCCCceeeecc---CCCCcccccceECCCCCEEEEEEecc
Confidence 6799999988765433311 36788899999999999998887654
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.6e-25 Score=227.53 Aligned_cols=367 Identities=9% Similarity=-0.036 Sum_probs=231.9
Q ss_pred EEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCC---CeEEEEEecCCCCEEEEEcC---------CCcEEEEeC
Q psy14906 167 VLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWG---PVTALSFRTDGPPMMVSGSN---------TGHLTVWNL 234 (583)
Q Consensus 167 ~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~s~~~---------dg~i~vwd~ 234 (583)
.++|+|||+++++ +.|+.|++||+.+++....+.++.. .+.+++|||||+ .|+.++. ++.|++||+
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~-~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQ-FVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCC-eEEEEecCceeEEeecceEEEEEEC
Confidence 6899999965554 5689999999999998877776633 489999999999 7777665 689999999
Q ss_pred CCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCC-----------------CC
Q psy14906 235 EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA-----------------PP 297 (583)
Q Consensus 235 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~-----------------~v 297 (583)
.+++.+... .....+..++|+|||+.|+.+. ++.|++|++.. +....+ +..++.. ..
T Consensus 98 ~~g~~~~~~--~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~--g~~~~l-~~~~~~~~v~~g~~~~v~~ee~~~~~ 171 (719)
T 1z68_A 98 SNGEFVRGN--ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPG--DPPFQI-TFNGRENKIFNGIPDWVYEEEMLATK 171 (719)
T ss_dssp TTTEECCSS--CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTT--SCCEEC-CCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred CCCccccce--ecCcccccceECCCCCEEEEEE-CCeEEEEeCCC--CCcEEE-ecCCCcCCeEcccccceeeeecccCc
Confidence 998874211 1125688899999999999886 78999996542 222111 1122221 12
Q ss_pred eeEEEeeCCCCEEEEeeCC-CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccccccccc
Q psy14906 298 NYIQFYGNSSDNILSAAGD-STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNN 376 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (583)
.+++|+| ||++|++++.| +.+.+|.+....... . ........+....
T Consensus 172 ~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~-~-----------------~~~~~~~yp~~g~------------- 219 (719)
T 1z68_A 172 YALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQ-Y-----------------PRTINIPYPKAGA------------- 219 (719)
T ss_dssp CCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSS-S-----------------CEEEEEECCBTTS-------------
T ss_pred ccEEECC-CCCEEEEEEECCCCCceEEeeccCCCC-C-----------------ccceeecCCCCCC-------------
Confidence 5899998 89999988764 445555442211000 0 0000111111100
Q ss_pred EEEEecCCceEEEeecCccccc-ceeeecccccccCCCCceEEEEccCCcEEEEEecC----ceEEEEE----cccCccc
Q psy14906 377 IAAIHTGKNKVSLWSFYKSKMD-DMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS----GHVDRFN----IQSGAHR 447 (583)
Q Consensus 377 ~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~i~d----~~~~~~~ 447 (583)
......+.+||....... ............+...+..++|+||++++++.... ..|.+|| ..+++..
T Consensus 220 ----~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~ 295 (719)
T 1z68_A 220 ----KNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCP 295 (719)
T ss_dssp ----CCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECC
T ss_pred ----CCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceE
Confidence 012236788888776532 00111101112234568899999998877774432 3588999 7777665
Q ss_pred cccCCCCCCCcccCee-----EEEEeCCCcEEEE--eecCC--cEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEE
Q psy14906 448 GSYGHDNQPGHVGGVR-----GVVSDNLNQIVIS--GGNDQ--TVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLA 518 (583)
Q Consensus 448 ~~~~~~~~~~h~~~v~-----~~~~s~~~~~l~s--~~~dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 518 (583)
..+.. ....|...+. .+.|+|||+.++. ...+| .|.+||+.++ +......+...+..+.++ +++.|+
T Consensus 296 ~~~~~-~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~--~~~~lt~~~~~v~~~~~~-d~~~i~ 371 (719)
T 1z68_A 296 KTQEH-IEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE--NAIQITSGKWEAINIFRV-TQDSLF 371 (719)
T ss_dssp GGGEE-EEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST--TCEECSCSSSCEEEEEEE-CSSEEE
T ss_pred EEEec-ccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC--ceEecccCceEEEEEEEE-eCCEEE
Confidence 54410 0014566666 8899999996554 44555 4666777665 433333334467777777 888777
Q ss_pred EEeCC-----ceEEEEEccc--cc-eEEeec----ccccceeeEEecCCCcEEEE-EeCC--CeEEEEeCCCcccccc
Q psy14906 519 VCLDD-----FTVNIIDIDT--CT-IIRKLS----GHMGQLTDADFSPDSRWLIT-ASMD--CTIRVWDIPSSQLIDC 581 (583)
Q Consensus 519 ~~~~d-----g~i~i~d~~~--~~-~~~~~~----~h~~~v~~l~~s~d~~~l~s-~~~d--~~i~vw~~~~~~~~~~ 581 (583)
..+.+ +..++|.+.. +. ....+. +|...+..+.|+||+++++. ++.+ ..+.+||+.++++++.
T Consensus 372 ~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~~~ 449 (719)
T 1z68_A 372 YSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKI 449 (719)
T ss_dssp EEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCEEEE
T ss_pred EEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCEEEE
Confidence 66654 7888888764 42 123333 36677889999999988774 3333 4689999988876543
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.5e-24 Score=225.38 Aligned_cols=328 Identities=9% Similarity=0.006 Sum_probs=218.6
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCc---ceEEEeeCCCCCEEEEEec---------C
Q psy14906 116 LILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS---CVNVLEPSPVVDIIGVGLS---------N 183 (583)
Q Consensus 116 ~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~s~~~~~l~~~~~---------d 183 (583)
.++|||+++++ +.|++|++||+.+++....+. .+.. .+.+++|||||++|++++. +
T Consensus 22 ~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~-----------~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~ 89 (719)
T 1z68_A 22 NWISGQEYLHQ-SADNNIVLYNIETGQSYTILS-----------NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYT 89 (719)
T ss_dssp EESSSSEEEEE-CTTSCEEEEESSSCCEEEEEC-----------HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred EECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEc-----------cccccccceeeEEECCCCCeEEEEecCceeEEeecc
Confidence 35899976655 469999999999998776664 3322 4889999999999999876 6
Q ss_pred CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccce------------
Q psy14906 184 KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVV------------ 251 (583)
Q Consensus 184 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v------------ 251 (583)
+.|++||+.+++.+..... ...+..++|+|||+ .|+.+. ++.|++||+.+++.......++...+
T Consensus 90 ~~i~~~d~~~g~~~~~~~l-~~~~~~~~~SPDG~-~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee 166 (719)
T 1z68_A 90 ATYYIYDLSNGEFVRGNEL-PRPIQYLCWSPVGS-KLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEE 166 (719)
T ss_dssp EEEEEEETTTTEECCSSCC-CSSBCCEEECSSTT-CEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHH
T ss_pred eEEEEEECCCCccccceec-CcccccceECCCCC-EEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeee
Confidence 8999999998876311111 25688999999999 566664 78999999988766443322333322
Q ss_pred -----EEEEEecCCCEEEEEeCCC----------------------------------eEEEEEccCCCCCceee-----
Q psy14906 252 -----TGAHFLYNEPLLVTSSPDN----------------------------------TLKLWIFDKADGNGRLL----- 287 (583)
Q Consensus 252 -----~~~~~~~~~~~l~s~~~d~----------------------------------~i~~w~~~~~~~~~~~~----- 287 (583)
.+++|+|||++|++++.|. .+++||++. +...
T Consensus 167 ~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~----~~~~~~~~~ 242 (719)
T 1z68_A 167 MLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY----PAYVGPQEV 242 (719)
T ss_dssp TTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC----HHHHCCEEC
T ss_pred cccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC----CCccceeEc
Confidence 4899999999999987652 677886642 2211
Q ss_pred ---EEeccCCCCCeeEEEeeCCCCEEEEeeCC----CcEEEEE----ccccccceeeccchhhhhhhhhhcchhcccccc
Q psy14906 288 ---RIREGHSAPPNYIQFYGNSSDNILSAAGD----STLRIFN----TKSETSNKNLGIASANRNNLKRKNRLEKMNEKF 356 (583)
Q Consensus 288 ---~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~iwd----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (583)
..+.+|...+..++|+| |++.+++.... ..|.+|| +.+++....+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~Sp-D~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~--------------------- 300 (719)
T 1z68_A 243 PVPAMIASSDYYFSWLTWVT-DERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEH--------------------- 300 (719)
T ss_dssp CCCHHHHTSCEEEEEEEESS-SSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEE---------------------
T ss_pred cCCccCCCCcceEEEeEEeC-CCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEec---------------------
Confidence 11345777889999998 67766664322 2477888 655543221100
Q ss_pred CCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCce-----EEEEccCCcEEEE--
Q psy14906 357 ILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT-----CVYITHCGNFVLI-- 429 (583)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~~~s~~~~~l~~-- 429 (583)
....+...+. .+.|+|||+.++.
T Consensus 301 --------------------------------------------------~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 330 (719)
T 1z68_A 301 --------------------------------------------------IEESRTGWAGGFFVSTPVFSYDAISYYKIF 330 (719)
T ss_dssp --------------------------------------------------EEECSSSCSSSSSCCCCEECTTSSCEEEEE
T ss_pred --------------------------------------------------ccccCCceEccccCCccEECCCCCeEEEEE
Confidence 0000012233 6789999996655
Q ss_pred EecCc--eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecC-----CcEEEEEccCCCCC-ceEEee-
Q psy14906 430 GYSSG--HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGND-----QTVKVWHFKQTGKP-PLRSIK- 500 (583)
Q Consensus 430 ~~~dg--~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~-~~~~~~- 500 (583)
...+| .|++||+.+++ ...+ ..+...+..+.++ +++.|+..+.+ +..++|.+...... ....+.
T Consensus 331 ~~~~g~~~l~~~~~~~~~-~~~l-----t~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~ 403 (719)
T 1z68_A 331 SDKDGYKHIHYIKDTVEN-AIQI-----TSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTC 403 (719)
T ss_dssp ECTTSCEEEEEESSCSTT-CEEC-----SCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESST
T ss_pred EccCCceEEEEEECCCCc-eEec-----ccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccC
Confidence 33444 57777877665 3334 3556668888877 77777666554 88999988752112 123332
Q ss_pred ----ccCCeeeEEeccCCcEEEEEe-CC--ceEEEEEccccceEEeec
Q psy14906 501 ----LDNGISFFRTHQESSMLAVCL-DD--FTVNIIDIDTCTIIRKLS 541 (583)
Q Consensus 501 ----~~~~v~~~~~s~~~~~l~~~~-~d--g~i~i~d~~~~~~~~~~~ 541 (583)
+...+..+.|+|++++++... .. ..+++||+.+++.+..+.
T Consensus 404 ~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~~~~~ 451 (719)
T 1z68_A 404 HLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRTDQEIKILE 451 (719)
T ss_dssp TTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSSCCEEEEEE
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCCCCEEEEee
Confidence 234677899999999877543 22 478899998887654443
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-23 Score=217.01 Aligned_cols=363 Identities=10% Similarity=-0.013 Sum_probs=233.1
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCc-----ceEEEeeCCCCCEEEEEecC--------
Q psy14906 117 ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS-----CVNVLEPSPVVDIIGVGLSN-------- 183 (583)
Q Consensus 117 is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~s~~~~~l~~~~~d-------- 183 (583)
.+|||++++++ |++|++||+.+++....+. .|.. ....++|||||++|+.++.+
T Consensus 24 w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 24 WISDHEYLYKQ--ENNILVFNAEYGNSSVFLE-----------NSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp ECSSSEEEEEE--TTEEEEEETTTCCEEEEEC-----------TTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred ECCCCcEEEEc--CCcEEEEECCCCceEEEEe-----------chhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 48999999986 9999999999999876665 3332 23447889999999998876
Q ss_pred -CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccce-----------
Q psy14906 184 -KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVV----------- 251 (583)
Q Consensus 184 -~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v----------- 251 (583)
+.+.+||+.+++.. .+..+...+...+|||||+ .|+.+ .++.|++||+.+++..+....++...+
T Consensus 91 ~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~-~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~e 167 (740)
T 4a5s_A 91 TASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGH-KLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEE 167 (740)
T ss_dssp EEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTT-CEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHH
T ss_pred ceEEEEEECCCCcEE-EcccCCCcceeeEECCCCC-EEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccc
Confidence 56779999988765 3666668899999999999 56655 468999999988765433212333222
Q ss_pred ------EEEEEecCCCEEEEEeCCCe-EEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEc
Q psy14906 252 ------TGAHFLYNEPLLVTSSPDNT-LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324 (583)
Q Consensus 252 ------~~~~~~~~~~~l~s~~~d~~-i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 324 (583)
..+.|||||+.|+.++.|.. +.+|++....... .+...+..+.|.+ .|.. .....|++||+
T Consensus 168 e~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~-------~~~~~~~~~~yp~-~G~~----~~~~~l~v~d~ 235 (740)
T 4a5s_A 168 EVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES-------LQYPKTVRVPYPK-AGAV----NPTVKFFVVNT 235 (740)
T ss_dssp HTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT-------CSSCEEEEEECCB-TTSC----CCEEEEEEEET
T ss_pred hhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC-------CCCCcceeecCCC-CcCc----CCeeEEEEEEC
Confidence 35899999999998876544 8888664321110 2334445566654 3432 12236888998
Q ss_pred cc---cccce--eeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 325 KS---ETSNK--NLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 325 ~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
.+ +.... .+...
T Consensus 236 ~~~~~~~~~~~~~l~~~--------------------------------------------------------------- 252 (740)
T 4a5s_A 236 DSLSSVTNATSIQITAP--------------------------------------------------------------- 252 (740)
T ss_dssp TSCCSSSCCCEEEECCC---------------------------------------------------------------
T ss_pred CCCCCCCcceEEEecCC---------------------------------------------------------------
Confidence 87 53211 11000
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEEEec----CceEEEEEcccCc----cccccCCCCCCCcccCee-----EEE
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS----SGHVDRFNIQSGA----HRGSYGHDNQPGHVGGVR-----GVV 466 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~~----~~~~~~~~~~~~h~~~v~-----~~~ 466 (583)
.....+...+..++|+|||+.++.... +..|++||+.+++ +...... ....|...+. .++
T Consensus 253 ------~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l-~~~~~~~~v~~~~~~~p~ 325 (740)
T 4a5s_A 253 ------ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQH-IEMSTTGWVGRFRPSEPH 325 (740)
T ss_dssp ------HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCE-EEECSSSCSSSSSCCCCE
T ss_pred ------ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEe-eeccCCceEccCcCCCce
Confidence 000011245788999999997766543 3479999999887 2221100 0023554444 789
Q ss_pred EeCCCcEEE-Eee-cCC--cEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCC-------ceEEEEEccccc
Q psy14906 467 SDNLNQIVI-SGG-NDQ--TVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDD-------FTVNIIDIDTCT 535 (583)
Q Consensus 467 ~s~~~~~l~-s~~-~dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------g~i~i~d~~~~~ 535 (583)
|+|||+.|+ ..+ .+| .|++||+.++ ...........+..+.. +|++.|+..+.. ..|+..++..++
T Consensus 326 fspDG~~l~~~~s~~~G~~~l~~~~~~~~--~~~~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~ 402 (740)
T 4a5s_A 326 FTLDGNSFYKIISNEEGYRHICYFQIDKK--DCTFITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYT 402 (740)
T ss_dssp ECTTSSEEEEEEECTTSCEEEEEEETTCS--SCEESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEE
T ss_pred EcCCCCEEEEEEEcCCCceEEEEEECCCC--ceEecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCC
Confidence 999999876 555 344 5888888776 55554444455655432 456655544433 345555555554
Q ss_pred eEEeecc----cccceeeEEecCCCcEEEEEeCC---CeEEEEeCCCccccc
Q psy14906 536 IIRKLSG----HMGQLTDADFSPDSRWLITASMD---CTIRVWDIPSSQLID 580 (583)
Q Consensus 536 ~~~~~~~----h~~~v~~l~~s~d~~~l~s~~~d---~~i~vw~~~~~~~~~ 580 (583)
....+.. .........||||+++++..... ..+.+++..+++.+.
T Consensus 403 ~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~ 454 (740)
T 4a5s_A 403 KVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLR 454 (740)
T ss_dssp EEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEE
T ss_pred cceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcEEE
Confidence 4323432 34568899999999987654433 368888888776544
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.93 E-value=7.7e-24 Score=199.99 Aligned_cols=302 Identities=8% Similarity=0.032 Sum_probs=206.7
Q ss_pred EEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccC-CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhh
Q psy14906 167 VLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTW-GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKK 245 (583)
Q Consensus 167 ~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 245 (583)
.++++++++++++++.++.|.+||+.+++.+..+..+. ..+..++|+|+++.+++++..++.|.+||+.+++.+..+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 45788899999999999999999999999988887652 26889999999985556777789999999999988766622
Q ss_pred cc-----ccceEEEEEecCCCEEEEEeCC------------CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCC
Q psy14906 246 AH-----RKVVTGAHFLYNEPLLVTSSPD------------NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSD 308 (583)
Q Consensus 246 ~~-----~~~v~~~~~~~~~~~l~s~~~d------------~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 308 (583)
.+ ...+..++|+|+|++|++++.+ +.|.+||+.... ..+.+..... ...+.+++|+| +++
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~-~~~~~~~~~s~-dg~ 160 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL-EAKPVRTFPM-PRQVYLMRAAD-DGS 160 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG-GBCCSEEEEC-CSSCCCEEECT-TSC
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc-ccceeeeccC-CCcccceeECC-CCc
Confidence 22 2347889999999999998865 899999875311 1222333333 34688999997 777
Q ss_pred EEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEE
Q psy14906 309 NILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVS 388 (583)
Q Consensus 309 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 388 (583)
+++++. .|.+||+.+++....+........ ...++ ..+.
T Consensus 161 -l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~--------------~~~~~------------------------~~~~ 199 (349)
T 1jmx_B 161 -LYVAGP--DIYKMDVKTGKYTVALPLRNWNRK--------------GYSAP------------------------DVLY 199 (349)
T ss_dssp -EEEESS--SEEEECTTTCCEEEEECSTTCCCT--------------TBCCC------------------------BCCC
T ss_pred -EEEccC--cEEEEeCCCCceeccccccccCCc--------------cccCc------------------------ccee
Confidence 555543 499999988876554421100000 00000 0000
Q ss_pred EeecCcccccceeeecccccccCCCCceEEEEccCCc-----------EEEEEecCceEEEEEcccCccccccCCCCCCC
Q psy14906 389 LWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGN-----------FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPG 457 (583)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-----------~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 457 (583)
+|....... .. .....+++++++. ++.....++.+.+++.. .
T Consensus 200 ~~~~~~~~~--~~-----------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~ 252 (349)
T 1jmx_B 200 FWPHQSPRH--EF-----------SMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA--------------D 252 (349)
T ss_dssp CCCCCCTTC--EE-----------EEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEE--------------E
T ss_pred eecCCCcce--eE-----------EeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccc--------------c
Confidence 111100000 00 0123455554432 22233344555555542 2
Q ss_pred cccCeeEEEEeC-CCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccce
Q psy14906 458 HVGGVRGVVSDN-LNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI 536 (583)
Q Consensus 458 h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 536 (583)
+...+.+++|+| ++++++++ ++.|.+||+.++ +.+..+.....+.+++|+|+|++|++++.++.|++||+++++.
T Consensus 253 ~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~--~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 253 LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR--KLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTT--EEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEE
T ss_pred CCCcceeeEecCCCCCEEEEE--cCeEEEEECccC--eEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEeccccce
Confidence 445688999999 99998888 789999999988 7777777777789999999999999888899999999999998
Q ss_pred EEeeccc
Q psy14906 537 IRKLSGH 543 (583)
Q Consensus 537 ~~~~~~h 543 (583)
+..++.+
T Consensus 329 ~~~~~~~ 335 (349)
T 1jmx_B 329 VKNIKLP 335 (349)
T ss_dssp EEEEECS
T ss_pred eeeeecC
Confidence 8877654
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-23 Score=195.66 Aligned_cols=285 Identities=15% Similarity=0.164 Sum_probs=189.1
Q ss_pred CCcEEEEeC--CCCeehhhhhhccccceEEEEEecCCCEEEEEeC---CCeEEEEEccCCCCCceeeEEeccCCCCCeeE
Q psy14906 226 TGHLTVWNL--EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP---DNTLKLWIFDKADGNGRLLRIREGHSAPPNYI 300 (583)
Q Consensus 226 dg~i~vwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~ 300 (583)
++.|.+|++ .+++........+...+..++|+|+|+ |++++. ++.|.+|+++. +..+.+..+..+...+..+
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~--g~~~~~~~~~~~~~~p~~~ 91 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDG--QTAHKLNTVVAPGTPPAYV 91 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEET--TEEEEEEEEEEESCCCSEE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecC--CcEEEeeeeecCCCCCEEE
Confidence 455666665 455544321134567788899999999 555544 68999998753 2344555555677788999
Q ss_pred EEeeCCCCEEEEee-CCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEE
Q psy14906 301 QFYGNSSDNILSAA-GDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAA 379 (583)
Q Consensus 301 ~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (583)
+|+| ++++|++++ .++.+.+|++........+..
T Consensus 92 a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~-------------------------------------------- 126 (347)
T 3hfq_A 92 AVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDT-------------------------------------------- 126 (347)
T ss_dssp EEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEE--------------------------------------------
T ss_pred EECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecce--------------------------------------------
Confidence 9997 898888887 679999999863221111100
Q ss_pred EecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcc-cCccccccCCCCCCCc
Q psy14906 380 IHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQ-SGAHRGSYGHDNQPGH 458 (583)
Q Consensus 380 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~h 458 (583)
...... .+. .......+.+++|+|+|+++++...++.|.+|++. +++........ ...
T Consensus 127 ----------~~~~~~-------~p~--~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~--~~~ 185 (347)
T 3hfq_A 127 ----------VQHSGH-------GPR--PEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLT--MEA 185 (347)
T ss_dssp ----------EECCCC-------CSS--TTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEE--CCT
T ss_pred ----------eecCCC-------CCC--ccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEE--cCC
Confidence 000000 000 00011457889999999966666778899999998 45432211000 122
Q ss_pred ccCeeEEEEeCCCcEEEE-eecCCcEEEEEccCCCCCc--eEEeec-c------CCeeeEEeccCCcEEE-EEeCCceEE
Q psy14906 459 VGGVRGVVSDNLNQIVIS-GGNDQTVKVWHFKQTGKPP--LRSIKL-D------NGISFFRTHQESSMLA-VCLDDFTVN 527 (583)
Q Consensus 459 ~~~v~~~~~s~~~~~l~s-~~~dg~i~iwd~~~~~~~~--~~~~~~-~------~~v~~~~~s~~~~~l~-~~~~dg~i~ 527 (583)
...+..++|+|||++++. ...++.+.+|++.....+. +..+.. . ..+..++|+|||++|+ +...++.|.
T Consensus 186 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~ 265 (347)
T 3hfq_A 186 GFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLA 265 (347)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEE
T ss_pred CCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEE
Confidence 346788999999996655 5678899999998521122 222221 1 3478899999999875 455689999
Q ss_pred EEEccc---cceEEeecccccceeeEEecCCCcEEEEEeCC-CeEEEE--eCCCcccc
Q psy14906 528 IIDIDT---CTIIRKLSGHMGQLTDADFSPDSRWLITASMD-CTIRVW--DIPSSQLI 579 (583)
Q Consensus 528 i~d~~~---~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d-~~i~vw--~~~~~~~~ 579 (583)
+|++.. .+.+..+..+...+..++|+|||++|++++.+ +.|.+| |.++|++.
T Consensus 266 v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 266 VFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 999973 25556666667778999999999998888765 899999 55667664
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-23 Score=212.08 Aligned_cols=270 Identities=8% Similarity=0.022 Sum_probs=200.3
Q ss_pred CCCeEEEEEecCCCCEEEEEcC-CCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC---CCeEEEEEccC
Q psy14906 204 WGPVTALSFRTDGPPMMVSGSN-TGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP---DNTLKLWIFDK 279 (583)
Q Consensus 204 ~~~v~~~~~~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---d~~i~~w~~~~ 279 (583)
..+|++++|+|||+ .|+.++. ||+++||++.+++..... ..+...+..++|+|| +++++++. +...++|.++.
T Consensus 21 ~~~~~~~~~~~DG~-~la~~s~~~g~~~lw~~~~g~~~~lt-~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGD-KLLVVGFSEGSVNAYLYDGGETVKLN-REPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTT-EEEEEEEETTEEEEEEEETTEEEECC-SSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCC-eEEEEEccCCceeEEEEcCCCcEeee-cccccccccccCCCC-eEEEEeccCCCCcceEEEEEec
Confidence 45899999999999 6777665 999999999776655443 334468999999999 77777765 56678887765
Q ss_pred --CCCCceeeEEeccCCCCCeeEEEeeCCCC-EEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcccccc
Q psy14906 280 --ADGNGRLLRIREGHSAPPNYIQFYGNSSD-NILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKF 356 (583)
Q Consensus 280 --~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (583)
.. ... .+... ..+...+|+| +++ .+++.+.++.+.+||+.+++..+...
T Consensus 98 ~~~g-~~~---~l~~~-~~~~~~~~s~-dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~---------------------- 149 (582)
T 3o4h_A 98 SRPG-EEQ---RLEAV-KPMRILSGVD-TGEAVVFTGATEDRVALYALDGGGLRELAR---------------------- 149 (582)
T ss_dssp TSTT-CCE---ECTTS-CSBEEEEEEE-CSSCEEEEEECSSCEEEEEEETTEEEEEEE----------------------
T ss_pred cCCC-ccc---cccCC-CCceeeeeCC-CCCeEEEEecCCCCceEEEccCCcEEEeec----------------------
Confidence 32 112 22222 2345678887 554 44455555566699998765322110
Q ss_pred CCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC---
Q psy14906 357 ILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS--- 433 (583)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--- 433 (583)
....+++|+|||++++.++.+
T Consensus 150 --------------------------------------------------------~~~~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 150 --------------------------------------------------------LPGFGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp --------------------------------------------------------ESSCEEEEEEETTEEEEEEEEETT
T ss_pred --------------------------------------------------------CCCceEEECCCCCEEEEEEEcCCC
Confidence 011688999999999988877
Q ss_pred -ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCC--cEEEEEccCCCCCceEEee-ccCCeeeEE
Q psy14906 434 -GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ--TVKVWHFKQTGKPPLRSIK-LDNGISFFR 509 (583)
Q Consensus 434 -g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~-~~~~v~~~~ 509 (583)
+.|++||+.+++.. .+ ..|...+..++|+|||+.|+++..++ .|++||+.++ +.. .+. +...+..++
T Consensus 174 ~~~i~~~d~~~g~~~-~l-----~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~--~~~-~~~~~~~~~~~~~ 244 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLR-VF-----DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDG--SVE-DLELPSKDFSSYR 244 (582)
T ss_dssp EEEEEEEETTTCCCE-EE-----CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTC--CEE-ECCCSCSHHHHHC
T ss_pred CeEEEEEcCCCCCce-Ee-----ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCC--cEE-EccCCCcChhhhh
Confidence 78999999888765 44 57888899999999999999888888 8999999987 555 333 334566666
Q ss_pred --------eccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCC---eEEEEeCCC
Q psy14906 510 --------THQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDC---TIRVWDIPS 575 (583)
Q Consensus 510 --------~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~---~i~vw~~~~ 575 (583)
|+|||.++++++.++.+++|++ ++... .+.+.|.+++|+ |++++++++.+. .+.+|+..+
T Consensus 245 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 245 PTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp CSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred hccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 9999999999999999999999 66554 344678999999 999999888775 477777653
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-23 Score=197.39 Aligned_cols=279 Identities=7% Similarity=-0.000 Sum_probs=192.5
Q ss_pred EEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEE-EEeCCCeEEEEEccCCCCCceee
Q psy14906 209 ALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV-TSSPDNTLKLWIFDKADGNGRLL 287 (583)
Q Consensus 209 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~i~~w~~~~~~~~~~~~ 287 (583)
.+++++++. ++++++.++.|.+||+.+++.+..+..+....+..++|+|++++++ +...++.|.+||++ .++..
T Consensus 4 g~~~~~~~~-~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~----t~~~~ 78 (349)
T 1jmx_B 4 GPALKAGHE-YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD----TCKNT 78 (349)
T ss_dssp CCCCCTTCE-EEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETT----TTEEE
T ss_pred cccccCCCE-EEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCC----CCcEE
Confidence 346777777 8999999999999999999888777322222578899999998655 55568999999764 34555
Q ss_pred EEeccC------CCCCeeEEEeeCCCCEEEEeeCC------------CcEEEEEccccccceeeccchhhhhhhhhhcch
Q psy14906 288 RIREGH------SAPPNYIQFYGNSSDNILSAAGD------------STLRIFNTKSETSNKNLGIASANRNNLKRKNRL 349 (583)
Q Consensus 288 ~~~~~~------~~~v~~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (583)
..+... ...+..++|+| +++++++++.+ +.|.+||+.+++..+.+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-------------- 143 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT-------------- 143 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE--------------
T ss_pred EEEEcccccccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeee--------------
Confidence 444422 22378999997 89999988865 7888888876543221100
Q ss_pred hccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEE
Q psy14906 350 EKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLI 429 (583)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 429 (583)
+ .....+.+++|+|+|+ +++
T Consensus 144 ----------------------------------------~-------------------~~~~~~~~~~~s~dg~-l~~ 163 (349)
T 1jmx_B 144 ----------------------------------------F-------------------PMPRQVYLMRAADDGS-LYV 163 (349)
T ss_dssp ----------------------------------------E-------------------ECCSSCCCEEECTTSC-EEE
T ss_pred ----------------------------------------c-------------------cCCCcccceeECCCCc-EEE
Confidence 0 0013477899999999 665
Q ss_pred EecCceEEEEEcccCccccccCCCCCCCc-------------------ccCeeEEEEeCCCcEE-----------EEeec
Q psy14906 430 GYSSGHVDRFNIQSGAHRGSYGHDNQPGH-------------------VGGVRGVVSDNLNQIV-----------ISGGN 479 (583)
Q Consensus 430 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~h-------------------~~~v~~~~~s~~~~~l-----------~s~~~ 479 (583)
++. .|.+||..+++....+.......+ ......+++++++... .....
T Consensus 164 ~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 241 (349)
T 1jmx_B 164 AGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 241 (349)
T ss_dssp ESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT
T ss_pred ccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEecc
Confidence 543 499999998887766532100000 0034456666554211 12223
Q ss_pred CCcEEEEEccCCCCCceEEeeccCCeeeEEecc-CCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcE
Q psy14906 480 DQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ-ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558 (583)
Q Consensus 480 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~ 558 (583)
++.+++|++. .....+..++++| +|++++++ ++.|.+||+.+++.+..+.. ...+.+++|+||+++
T Consensus 242 ~~~~~~~~~~----------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~ 308 (349)
T 1jmx_B 242 TGKTHTQEFA----------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDK 308 (349)
T ss_dssp TCCEEEEEEE----------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSC
T ss_pred CCcEEecccc----------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCE
Confidence 3344444432 2345688999999 99999988 88999999999998877763 345789999999999
Q ss_pred EEEEeCCCeEEEEeCCCccccccc
Q psy14906 559 LITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 559 l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
|++++.++.|++||+.+++.+..+
T Consensus 309 l~~~~~~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 309 LYLGGTFNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp EEEESBSSEEEEEETTTTEEEEEE
T ss_pred EEEecCCCeEEEEeccccceeeee
Confidence 988888999999999999888765
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.92 E-value=9.8e-22 Score=186.18 Aligned_cols=303 Identities=8% Similarity=0.013 Sum_probs=195.1
Q ss_pred CCCEEEEEe----CCCcEEEEEcC--CCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC----CeEEEE
Q psy14906 120 FGPHLISVD----EESNVKVWDIK--AEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN----KKIILH 189 (583)
Q Consensus 120 ~~~~l~s~~----~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----~~i~iw 189 (583)
...+++.|+ .++.|.+|+++ +++...... .+......++|+|||++|++++.+ +.|.+|
T Consensus 12 ~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~-----------~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~ 80 (361)
T 3scy_A 12 SELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSD-----------AEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAF 80 (361)
T ss_dssp GEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEE-----------EECSCCCSEEECTTSSEEEEEECCSSTTCEEEEE
T ss_pred CceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeec-----------ccCCCCceEEECCCCCEEEEEEccCCCCCcEEEE
Confidence 344556653 35689999774 455443332 235566779999999999998875 799999
Q ss_pred EccC--Cce--eEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhh-------------hccccceE
Q psy14906 190 NILT--DES--LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK-------------KAHRKVVT 252 (583)
Q Consensus 190 ~~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-------------~~~~~~v~ 252 (583)
++.. ++. +.....+......+++ +++.++++...++.+.+|++.....+..+. ..+...+.
T Consensus 81 ~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~ 158 (361)
T 3scy_A 81 AFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLH 158 (361)
T ss_dssp EEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEE
T ss_pred EEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcce
Confidence 9875 432 3334444456777887 777445555568899999997543332220 11223468
Q ss_pred EEEEecCCCEEEEEe-CCCeEEEEEccCCCC----C-cee----eEEeccCCCCCeeEEEeeCCCCEEEEee-CCCcEEE
Q psy14906 253 GAHFLYNEPLLVTSS-PDNTLKLWIFDKADG----N-GRL----LRIREGHSAPPNYIQFYGNSSDNILSAA-GDSTLRI 321 (583)
Q Consensus 253 ~~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~----~-~~~----~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~i 321 (583)
+++|+|+|+++++++ .++.+.+|+++.... . ... ......+...+..++|+| +++++++++ .++.|.+
T Consensus 159 ~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v 237 (361)
T 3scy_A 159 CVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNS-DGKFAYLINEIGGTVIA 237 (361)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTCEEEE
T ss_pred EEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcC-CCCEEEEEcCCCCeEEE
Confidence 899999999766655 478999998875432 1 111 112223345567899997 788777666 5788888
Q ss_pred EEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccccee
Q psy14906 322 FNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401 (583)
Q Consensus 322 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 401 (583)
|++.++.....
T Consensus 238 ~~~~~g~~~~~--------------------------------------------------------------------- 248 (361)
T 3scy_A 238 FRYADGMLDEI--------------------------------------------------------------------- 248 (361)
T ss_dssp EEEETTEEEEE---------------------------------------------------------------------
T ss_pred EEecCCceEEe---------------------------------------------------------------------
Confidence 88764321000
Q ss_pred eecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec--
Q psy14906 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN-- 479 (583)
Q Consensus 402 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-- 479 (583)
..+ ... ..+......++|+|||++|+++..
T Consensus 249 --------------~~~-----------------------------~~~-----~~~~~~~~~i~~spdg~~l~v~~~~~ 280 (361)
T 3scy_A 249 --------------QTV-----------------------------AAD-----TVNAQGSGDIHLSPDGKYLYASNRLK 280 (361)
T ss_dssp --------------EEE-----------------------------ESC-----SSCCCCEEEEEECTTSSEEEEEECSS
T ss_pred --------------EEE-----------------------------ecC-----CCCCCCcccEEECCCCCEEEEECCCC
Confidence 000 000 233344578899999988866554
Q ss_pred CCcEEEEEcc--CCCCCceEEeeccCCeeeEEeccCCcEEEEEe-CCceEEEEEc--cccceEEee-cccccceeeEEec
Q psy14906 480 DQTVKVWHFK--QTGKPPLRSIKLDNGISFFRTHQESSMLAVCL-DDFTVNIIDI--DTCTIIRKL-SGHMGQLTDADFS 553 (583)
Q Consensus 480 dg~i~iwd~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~--~~~~~~~~~-~~h~~~v~~l~~s 553 (583)
++.|.+|++. ++....+..+.....+..++|+|||++|++++ .++.|.+|++ +++++.... ..+...+.|+.|.
T Consensus 281 ~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 281 ADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp SCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 4789999986 33112334444445788999999999988887 5789999654 567665443 2344678888885
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-23 Score=212.86 Aligned_cols=268 Identities=7% Similarity=-0.065 Sum_probs=193.3
Q ss_pred CcceEEEeeCCCCCEEEEEec-CCeEEEEEccCCceeEEEeccC-CCeEEEEEecCCCCEEEEEcC---CCcEEEEeCCC
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLS-NKKIILHNILTDESLMEFIQTW-GPVTALSFRTDGPPMMVSGSN---TGHLTVWNLED 236 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~---dg~i~vwd~~~ 236 (583)
..+|.+++|+|||+.||+++. +|++.||++.+++. ..+..+. ..+..++|+|| + ++++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd-~-~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET-VKLNREPINSVLDPHYGVG-R-VILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE-EECCSSCCSEECEECTTCS-E-EEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc-EeeecccccccccccCCCC-e-EEEEeccCCCCcceEEEEEec
Confidence 467999999999999999887 99999999976655 4455444 68999999999 5 7887765 45556654432
Q ss_pred ---CeehhhhhhccccceEEEEEecCCC--EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEE
Q psy14906 237 ---RQVENQIKKAHRKVVTGAHFLYNEP--LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL 311 (583)
Q Consensus 237 ---~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 311 (583)
+... .+.. ...+...+|+|+++ .+++++ ++.+.+|+++. ++...... +.. .+++|+| ||++|+
T Consensus 98 ~~~g~~~-~l~~--~~~~~~~~~s~dg~~~~~~s~~-~~~~~l~d~~~----g~~~~l~~-~~~--~~~~~sp-DG~~la 165 (582)
T 3o4h_A 98 SRPGEEQ-RLEA--VKPMRILSGVDTGEAVVFTGAT-EDRVALYALDG----GGLRELAR-LPG--FGFVSDI-RGDLIA 165 (582)
T ss_dssp TSTTCCE-ECTT--SCSBEEEEEEECSSCEEEEEEC-SSCEEEEEEET----TEEEEEEE-ESS--CEEEEEE-ETTEEE
T ss_pred cCCCccc-cccC--CCCceeeeeCCCCCeEEEEecC-CCCceEEEccC----CcEEEeec-CCC--ceEEECC-CCCEEE
Confidence 2222 2311 22334668888886 344444 44556997752 33333322 222 7899998 899999
Q ss_pred EeeCC----CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceE
Q psy14906 312 SAAGD----STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKV 387 (583)
Q Consensus 312 ~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 387 (583)
+++.+ +.|++||+.+++.....
T Consensus 166 ~~~~~~~~~~~i~~~d~~~g~~~~l~------------------------------------------------------ 191 (582)
T 3o4h_A 166 GLGFFGGGRVSLFTSNLSSGGLRVFD------------------------------------------------------ 191 (582)
T ss_dssp EEEEEETTEEEEEEEETTTCCCEEEC------------------------------------------------------
T ss_pred EEEEcCCCCeEEEEEcCCCCCceEee------------------------------------------------------
Confidence 88776 77999998776542111
Q ss_pred EEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCc--eEEEEEcccCccccccCCCCCCCcccCeeEE
Q psy14906 388 SLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG--HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGV 465 (583)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~ 465 (583)
.+...+..++|+|||++|+++..++ .|++||+.+++.. .+ ..|...+..+
T Consensus 192 ----------------------~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~-----~~~~~~~~~~ 243 (582)
T 3o4h_A 192 ----------------------SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DL-----ELPSKDFSSY 243 (582)
T ss_dssp ----------------------CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-EC-----CCSCSHHHHH
T ss_pred ----------------------cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ec-----cCCCcChhhh
Confidence 0114568899999999999888888 8999999988877 55 5777777777
Q ss_pred E--------EeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCc---eEEEEEccc
Q psy14906 466 V--------SDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDF---TVNIIDIDT 533 (583)
Q Consensus 466 ~--------~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~i~d~~~ 533 (583)
+ |+|||.++++++.|+.+++|++ + +... .....+.+++|+ +++++++++.+. .+++||..+
T Consensus 244 ~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g--~~~~--~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 244 RPTAITWLGYLPDGRLAVVARREGRSAVFID--G--ERVE--APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp CCSEEEEEEECTTSCEEEEEEETTEEEEEET--T--EEEC--CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred hhccccceeEcCCCcEEEEEEcCCcEEEEEE--C--Ceec--cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 7 9999999999999999999999 4 4443 233578899999 999998887764 477777654
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.91 E-value=9.2e-22 Score=186.37 Aligned_cols=292 Identities=16% Similarity=0.212 Sum_probs=192.9
Q ss_pred EEEEEc----CCCcEEEEeC--CCCeehhhhhhccccceEEEEEecCCCEEEEEeCC----CeEEEEEccCCCCCceeeE
Q psy14906 219 MMVSGS----NTGHLTVWNL--EDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD----NTLKLWIFDKADGNGRLLR 288 (583)
Q Consensus 219 ~l~s~~----~dg~i~vwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----~~i~~w~~~~~~~~~~~~~ 288 (583)
.++.|+ .++.|.+|.+ .+++..... ..+...+..++|+|++++|++++.+ +.+.+|+++..++..+.+.
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~-~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLS-DAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEE-EEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEee-cccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee
Confidence 455653 3567888876 445543333 2266778889999999999999876 7999998886544444555
Q ss_pred EeccCCCCCeeEEEeeCCCCEEEEee-CCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeee
Q psy14906 289 IREGHSAPPNYIQFYGNSSDNILSAA-GDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFG 367 (583)
Q Consensus 289 ~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (583)
....+...+..+++ ++++|++++ .++.+.+|++........+...
T Consensus 94 ~~~~~~~~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~------------------------------- 139 (361)
T 3scy_A 94 TQKTMGADPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDV------------------------------- 139 (361)
T ss_dssp EEECSSSCEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEE-------------------------------
T ss_pred EeccCCCCcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCccccee-------------------------------
Confidence 55545556666766 577777666 5789999999754332211000
Q ss_pred cccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe-cCceEEEEEcccCcc
Q psy14906 368 LAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRFNIQSGAH 446 (583)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~ 446 (583)
....... + .........+.+++|+|+|++++++. .++.|.+|++.....
T Consensus 140 ----------------------~~~~g~~-------~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~ 189 (361)
T 3scy_A 140 ----------------------IEFKGSG-------P-DKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNAN 189 (361)
T ss_dssp ----------------------EECCCCC-------S-CTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCC
T ss_pred ----------------------EEccCCC-------C-CccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCC
Confidence 0000000 0 00000113468899999999776655 578999999875432
Q ss_pred ------c------cccCCCCCCCcccCeeEEEEeCCCcEEEEee-cCCcEEEEEccCCCCCceEEeec----cCCeeeEE
Q psy14906 447 ------R------GSYGHDNQPGHVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQTGKPPLRSIKL----DNGISFFR 509 (583)
Q Consensus 447 ------~------~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~----~~~v~~~~ 509 (583)
+ .... ..+...+..++|+||++++++++ .++.|.+|++.++....+..+.. ...+..++
T Consensus 190 ~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~ 265 (361)
T 3scy_A 190 ADNKEKFLTKGTPEAFK----VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIH 265 (361)
T ss_dssp TTTCCCCEEEEEEEEEE----CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEE
T ss_pred cccccceeeccccccee----cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEE
Confidence 1 1111 23455678999999999887776 68999999998651111222221 13467999
Q ss_pred eccCCcEEEEEeCC--ceEEEEEcc--ccc--eEEeecccccceeeEEecCCCcEEEEEe-CCCeEEEE--eCCCccccc
Q psy14906 510 THQESSMLAVCLDD--FTVNIIDID--TCT--IIRKLSGHMGQLTDADFSPDSRWLITAS-MDCTIRVW--DIPSSQLID 580 (583)
Q Consensus 510 ~s~~~~~l~~~~~d--g~i~i~d~~--~~~--~~~~~~~h~~~v~~l~~s~d~~~l~s~~-~d~~i~vw--~~~~~~~~~ 580 (583)
|+|||++|+++..+ +.|.+|++. +++ .+..+.. ...+.+++|+|||++|++++ .++.|.+| |..+|++..
T Consensus 266 ~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 266 LSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred ECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 99999998776654 899999995 444 4444544 55788999999999988887 67899996 555776643
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.7e-22 Score=185.84 Aligned_cols=275 Identities=9% Similarity=0.058 Sum_probs=179.9
Q ss_pred CCcEEEEEcC--CCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec---CCeEEEEEccCCc--eeEEEec
Q psy14906 130 ESNVKVWDIK--AEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS---NKKIILHNILTDE--SLMEFIQ 202 (583)
Q Consensus 130 dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---d~~i~iw~~~~~~--~~~~~~~ 202 (583)
++.|.+|+++ +++....... .+...+..++|+|||+ |++++. ++.|.+|++.+++ .+..+..
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~----------~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~ 83 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLL----------AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA 83 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEE----------EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCEEEEEEcCCCCeEEEeeee----------eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeec
Confidence 4567777765 4544331111 4456677899999999 555544 5899999998765 4444455
Q ss_pred cCCCeEEEEEecCCCCEEEEEc-CCCcEEEEeCCC-C--eehhhhhh-c-------cccceEEEEEecCCCEEEEEeCCC
Q psy14906 203 TWGPVTALSFRTDGPPMMVSGS-NTGHLTVWNLED-R--QVENQIKK-A-------HRKVVTGAHFLYNEPLLVTSSPDN 270 (583)
Q Consensus 203 ~~~~v~~~~~~~~~~~~l~s~~-~dg~i~vwd~~~-~--~~~~~~~~-~-------~~~~v~~~~~~~~~~~l~s~~~d~ 270 (583)
+...+..++|+|+|+ +|++++ .++.+.+|++.. + +.+..+.. + +...+.+++|+|+|+++++...++
T Consensus 84 ~~~~p~~~a~spdg~-~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~ 162 (347)
T 3hfq_A 84 PGTPPAYVAVDEARQ-LVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSD 162 (347)
T ss_dssp ESCCCSEEEEETTTT-EEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTT
T ss_pred CCCCCEEEEECCCCC-EEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCC
Confidence 667899999999999 566555 789999999963 2 22222210 0 123488899999999666666788
Q ss_pred eEEEEEccCCCCCceeeEEeccC-CCCCeeEEEeeCCCCEEEE-eeCCCcEEEEEccc--cccceeeccchhhhhhhhhh
Q psy14906 271 TLKLWIFDKADGNGRLLRIREGH-SAPPNYIQFYGNSSDNILS-AAGDSTLRIFNTKS--ETSNKNLGIASANRNNLKRK 346 (583)
Q Consensus 271 ~i~~w~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~l~~-~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~ 346 (583)
.|.+|+++. .+.......+..+ ...+..++|+| +++++++ ...++.+.+|++.. ++.....
T Consensus 163 ~v~~~~~~~-~g~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~------------- 227 (347)
T 3hfq_A 163 KVYVYNVSD-AGQLSEQSVLTMEAGFGPRHLVFSP-DGQYAFLAGELSSQIASLKYDTQTGAFTQLG------------- 227 (347)
T ss_dssp EEEEEEECT-TSCEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEEEEEE-------------
T ss_pred EEEEEEECC-CCcEEEeeeEEcCCCCCCceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCceEEee-------------
Confidence 999998762 2222333322222 23577899998 7886665 55688999999874 2211000
Q ss_pred cchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcE
Q psy14906 347 NRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNF 426 (583)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 426 (583)
..... +... .....+..++|+|||++
T Consensus 228 ------------------------------------------~~~~~----------~~~~--~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 228 ------------------------------------------IVKTI----------PADY--TAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp ------------------------------------------EEESS----------CTTC--CSCCEEEEEEECTTSCE
T ss_pred ------------------------------------------eeeec----------CCCC--CCCCcceeEEECCCCCE
Confidence 00000 0000 00134778999999998
Q ss_pred EEE-EecCceEEEEEcccC---ccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec-CCcEEEEEccC
Q psy14906 427 VLI-GYSSGHVDRFNIQSG---AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN-DQTVKVWHFKQ 490 (583)
Q Consensus 427 l~~-~~~dg~i~i~d~~~~---~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-dg~i~iwd~~~ 490 (583)
|++ ...++.|.+|++... +.+..+ ..+...+..++|+||+++|++++. ++.|.+|+++.
T Consensus 254 l~v~~~~~~~v~v~~~~~~g~~~~~~~~-----~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 254 LYVSNRGYNTLAVFAVTADGHLTLIQQI-----STEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EEEEEETTTEEEEEEECGGGCEEEEEEE-----ECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEEEeCCCCEEEEEEECCCCcEEEeEEE-----ecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 755 456899999999732 233333 345567899999999998888775 48999996643
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-22 Score=193.03 Aligned_cols=319 Identities=8% Similarity=-0.007 Sum_probs=195.8
Q ss_pred EEEEccCCceeEEEeccCCCeEE-----EEEecCCCCEEEEEcC-CC--cEEEEeCCCCeehhhhhhccccceEEEEEec
Q psy14906 187 ILHNILTDESLMEFIQTWGPVTA-----LSFRTDGPPMMVSGSN-TG--HLTVWNLEDRQVENQIKKAHRKVVTGAHFLY 258 (583)
Q Consensus 187 ~iw~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~~l~s~~~-dg--~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 258 (583)
..++..++..+..+..+...... .+|+|||+ .|+.++. ++ .|.+||+.+++..... .++...+..+.|+|
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~g~~~l~~~d~~~g~~~~lt-~~~~~~~~~~~~sp 90 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGS-KLLFGGAFDGPWNYYLLDLNTQVATQLT-EGRGDNTFGGFLSP 90 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSC-EEEEEECTTSSCEEEEEETTTCEEEECC-CSSCBCSSSCEECT
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCCC-EEEEEEcCCCCceEEEEeCCCCceEEee-eCCCCCccceEEcC
Confidence 34577788888888877666665 88999999 5555554 66 4888899988877665 56666666778999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEE--eeCCCCEEEEeeCCCcEEEEEccccccceeeccc
Q psy14906 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQF--YGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIA 336 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 336 (583)
||+.|+.++.++.+.+|+++. ++.......+...+....| +| ++.+++....+ .... ..+...
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~----g~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~---------~~~~-~~~~~~ 155 (388)
T 3pe7_A 91 DDDALFYVKDGRNLMRVDLAT----LEENVVYQVPAEWVGYGTWVANS-DCTKLVGIEIR---------REDW-VPLTDW 155 (388)
T ss_dssp TSSEEEEEETTTEEEEEETTT----CCEEEEEECCTTEEEEEEEEECT-TSSEEEEEEEE---------GGGC-CCCCSH
T ss_pred CCCEEEEEeCCCeEEEEECCC----CcceeeeechhhcccccceeECC-CCCeecccccc---------Cccc-cccccc
Confidence 999999999999999997653 2333333334443333333 44 66666542110 0000 000000
Q ss_pred hhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCce
Q psy14906 337 SANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT 416 (583)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 416 (583)
. .+. . ......+..+.+||+.+....... .+...+.
T Consensus 156 --~-----------------------~~~----------~-~~~~~~~~~l~~~d~~~g~~~~l~--------~~~~~~~ 191 (388)
T 3pe7_A 156 --K-----------------------KFH----------E-FYFTKPCCRLMRVDLKTGESTVIL--------QENQWLG 191 (388)
T ss_dssp --H-----------------------HHH----------H-HGGGCCCEEEEEEETTTCCEEEEE--------EESSCEE
T ss_pred --c-----------------------hhh----------h-hhccCCcceEEEEECCCCceEEee--------cCCcccc
Confidence 0 000 0 000011234555665544321111 0114578
Q ss_pred EEEEcc-CCcEEEEEecC------ceEEEEEcccCccccccCCCCCCCcc-cCeeEEEEeCCCcEEEEeec-CC----cE
Q psy14906 417 CVYITH-CGNFVLIGYSS------GHVDRFNIQSGAHRGSYGHDNQPGHV-GGVRGVVSDNLNQIVISGGN-DQ----TV 483 (583)
Q Consensus 417 ~~~~s~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~~~-dg----~i 483 (583)
.+.|+| ||+.|+....+ ..|.++|...+...... ..+. ..+..++|+|||+.|+..+. ++ .|
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-----~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (388)
T 3pe7_A 192 HPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK-----THAEGESCTHEFWVPDGSALVYVSYLKGSPDRFI 266 (388)
T ss_dssp EEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC-----CCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEE
T ss_pred ccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee-----eCCCCcccccceECCCCCEEEEEecCCCCCcceE
Confidence 899999 99998887653 37888887765543332 2222 35788999999997765443 22 39
Q ss_pred EEEEccCCCCCceEEeeccC------CeeeEEeccCCcEEEEE---------eCCceEEEEEccccceEEeeccccc---
Q psy14906 484 KVWHFKQTGKPPLRSIKLDN------GISFFRTHQESSMLAVC---------LDDFTVNIIDIDTCTIIRKLSGHMG--- 545 (583)
Q Consensus 484 ~iwd~~~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~~~---------~~dg~i~i~d~~~~~~~~~~~~h~~--- 545 (583)
++||+.++ +......... ......|+|||+.|+.. ..+..|++||+.+++. ..+..|..
T Consensus 267 ~~~d~~~g--~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~ 343 (388)
T 3pe7_A 267 YSADPETL--ENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWK 343 (388)
T ss_dssp EEECTTTC--CEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCC
T ss_pred EEEecCCC--ceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCccc
Confidence 99999987 4332222221 12334799999988864 4566899999998765 44555555
Q ss_pred --------ceeeEEecCCCcEEEEEe-CCCeEEEEeCC
Q psy14906 546 --------QLTDADFSPDSRWLITAS-MDCTIRVWDIP 574 (583)
Q Consensus 546 --------~v~~l~~s~d~~~l~s~~-~d~~i~vw~~~ 574 (583)
.+.+++|+|||++|+.++ .++...||.++
T Consensus 344 ~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 344 VFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp CBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 588899999999887665 46666666544
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-21 Score=181.58 Aligned_cols=304 Identities=12% Similarity=0.036 Sum_probs=206.3
Q ss_pred ccCCCEEEEEe------CCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec---------
Q psy14906 118 LPFGPHLISVD------EESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS--------- 182 (583)
Q Consensus 118 s~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--------- 182 (583)
.++++++++.. .|+.|.+||..+++.+.++. .+..+ .++|+||+++|+++..
T Consensus 12 ~~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~-----------~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~ 78 (361)
T 2oiz_A 12 APQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVP-----------TAFNG--HVQVSNDGKKIYTMTTYHERITRGK 78 (361)
T ss_dssp SCGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEE-----------CCEEE--EEEECTTSSEEEEEEEEETTSSSSC
T ss_pred CCCCCEEEEECCCCCccccCeEEEEECCCCeEEEEec-----------CCCCC--ceEECCCCCEEEEEEecccccccCC
Confidence 34667777654 36799999999999888876 44444 8999999999998863
Q ss_pred -CCeEEEEEccCCceeEEEecc------CCCeEEEEEecCCCCEEEEEcC--CCcEEEEeCCCCeehhh-hhhccccceE
Q psy14906 183 -NKKIILHNILTDESLMEFIQT------WGPVTALSFRTDGPPMMVSGSN--TGHLTVWNLEDRQVENQ-IKKAHRKVVT 252 (583)
Q Consensus 183 -d~~i~iw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~-~~~~~~~~v~ 252 (583)
++.|.+||..+++.+.++... ......++|+|||+ +|+++.. ++.|.+||+.+++.+.. +. ... ..
T Consensus 79 ~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~-~l~v~n~~~~~~v~v~d~~~~~~~~~~i~--~~~-~~ 154 (361)
T 2oiz_A 79 RSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGK-FIVLQNASPATSIGIVDVAKGDYVEDVTA--AAG-CW 154 (361)
T ss_dssp EEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSS-EEEEEEESSSEEEEEEETTTTEEEEEEGG--GTT-EE
T ss_pred CCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCC-EEEEECCCCCCeEEEEECCCCcEEEEEec--CCC-cc
Confidence 567999999999998887643 24567899999999 6666543 68899999999988877 62 222 23
Q ss_pred EEEEecCC-CEEEEEeCCCeEEEEEccCCCCCceeeEE------eccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcc
Q psy14906 253 GAHFLYNE-PLLVTSSPDNTLKLWIFDKADGNGRLLRI------REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325 (583)
Q Consensus 253 ~~~~~~~~-~~l~s~~~d~~i~~w~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 325 (583)
.+.+.|++ ..+++.+.||.+.+|+++.. ++.... +..+..+ ..+.+.+ ++..++..+.++.+.++|+.
T Consensus 155 ~v~~~p~~~~~~~~~~~dg~~~~v~~~~~---g~~~~~~~~~~~~~~~~~~-~~~~~~~-~g~~~~~~~~~~~v~v~d~~ 229 (361)
T 2oiz_A 155 SVIPQPNRPRSFMTICGDGGLLTINLGED---GKVASQSRSKQMFSVKDDP-IFIAPAL-DKDKAHFVSYYGNVYSADFS 229 (361)
T ss_dssp EEEECTTSSSEEEEEETTSSEEEEEECTT---SSEEEEEECCCCSCTTTSC-BCSCCEE-CSSEEEEEBTTSEEEEEECS
T ss_pred eeEEcCCCCeeEEEECCCCcEEEEEECCC---CcEeeeccccceEcCCCCc-eEEEecc-cCCEEEEEeCCCeEEEEEec
Confidence 35567765 67788889999999976431 222211 1111111 1222333 44555555566666666654
Q ss_pred ccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecc
Q psy14906 326 SETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPE 405 (583)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 405 (583)
......
T Consensus 230 ~~~~~~-------------------------------------------------------------------------- 235 (361)
T 2oiz_A 230 GDEVKV-------------------------------------------------------------------------- 235 (361)
T ss_dssp SSSCEE--------------------------------------------------------------------------
T ss_pred CCCcee--------------------------------------------------------------------------
Confidence 321100
Q ss_pred cccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec------
Q psy14906 406 RCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN------ 479 (583)
Q Consensus 406 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~------ 479 (583)
+..|++....... . .........++|+|+++.++.+..
T Consensus 236 ------------------------------~~~~~~~~~~~~~-~-----~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~ 279 (361)
T 2oiz_A 236 ------------------------------DGPWSLLNDEDKA-K-----NWVPGGYNLVGLHRASGRMYVFMHPDGKEG 279 (361)
T ss_dssp ------------------------------EEEEESCCHHHHH-T-----TCEECCSSCEEEETTTTEEEEEEESSCCTT
T ss_pred ------------------------------cccccccCccccc-c-----ccccCCeeEEEEecCCCeEEEEEccCCCcc
Confidence 0001110000000 0 000111123678888776665432
Q ss_pred -----CCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEcccc--ceEEeecccccceeeEEe
Q psy14906 480 -----DQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTC--TIIRKLSGHMGQLTDADF 552 (583)
Q Consensus 480 -----dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~h~~~v~~l~~ 552 (583)
.+.|.+||+.+. +.+..+..+. +..++|+|||++|+++.. +.|.+||.+++ +.+..+..+......+++
T Consensus 280 ~~~~~~~~v~viD~~t~--~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~ 355 (361)
T 2oiz_A 280 THKFPAAEIWVMDTKTK--QRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQF 355 (361)
T ss_dssp CTTCCCSEEEEEETTTT--EEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEE
T ss_pred cccCCCceEEEEECCCC--cEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEe
Confidence 347999999998 8888888877 999999999999998887 99999999999 999888777788899999
Q ss_pred cCCCc
Q psy14906 553 SPDSR 557 (583)
Q Consensus 553 s~d~~ 557 (583)
+|||+
T Consensus 356 ~p~G~ 360 (361)
T 2oiz_A 356 HPVGG 360 (361)
T ss_dssp CCCSC
T ss_pred cCCCC
Confidence 99985
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-22 Score=191.69 Aligned_cols=323 Identities=10% Similarity=-0.064 Sum_probs=211.7
Q ss_pred EEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC---CeEEEEEccCCceeEEEeccCCCeEEE
Q psy14906 134 KVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN---KKIILHNILTDESLMEFIQTWGPVTAL 210 (583)
Q Consensus 134 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---~~i~iw~~~~~~~~~~~~~~~~~v~~~ 210 (583)
..+|..+++.+..+...... .+...+..++|+|||++|+..... ..|.+||+.+++......++......+
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~------~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 86 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDII------CHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGG 86 (396)
T ss_dssp EEECTTTCCEEEECSCTTSC------EECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTC
T ss_pred eeecCCCCcceEEEecCCCC------ccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccc
Confidence 45577888877776521100 122336778999999998877543 478899998877654433332223347
Q ss_pred EEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEe
Q psy14906 211 SFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIR 290 (583)
Q Consensus 211 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~ 290 (583)
.|+|||+ .|+..+.++.|.+||+.+++..... ..+.. |+++|+.|+....+....+|..
T Consensus 87 ~~spdg~-~l~~~~~~~~l~~~d~~~~~~~~~~-~~~~~------~~~~g~~l~~~~~~~~~~~~~~------------- 145 (396)
T 3c5m_A 87 FISTDER-AFFYVKNELNLMKVDLETLEEQVIY-TVDEE------WKGYGTWVANSDCTKLVGIEIL------------- 145 (396)
T ss_dssp EECTTSS-EEEEEETTTEEEEEETTTCCEEEEE-ECCTT------EEEEEEEEECTTSSEEEEEEEE-------------
T ss_pred eECCCCC-EEEEEEcCCcEEEEECCCCCcEEEE-ecccc------cCCCCCEEEeccCCcccccccc-------------
Confidence 8999999 7877777889999999887654433 22332 7788888887776665555521
Q ss_pred ccCCCCCeeEEEeeCCCCEEEEe-----eCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceee
Q psy14906 291 EGHSAPPNYIQFYGNSSDNILSA-----AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFS 365 (583)
Q Consensus 291 ~~~~~~v~~~~~~~~~~~~l~~~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (583)
.+.++| +++.++.. ..+..|.+||+.+++......
T Consensus 146 --------~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~------------------------------- 185 (396)
T 3c5m_A 146 --------KRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ------------------------------- 185 (396)
T ss_dssp --------GGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-------------------------------
T ss_pred --------ccccCC-CCcceeeeeeccCCCcceEEEEECCCCcEEeecc-------------------------------
Confidence 123555 66666544 356678888887654321110
Q ss_pred eecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc-CCcEEEEEecC------ceEEE
Q psy14906 366 FGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH-CGNFVLIGYSS------GHVDR 438 (583)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d------g~i~i 438 (583)
+...+..+.|+| +++.++..+.+ ..|.+
T Consensus 186 ---------------------------------------------~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~ 220 (396)
T 3c5m_A 186 ---------------------------------------------DTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWL 220 (396)
T ss_dssp ---------------------------------------------ESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEE
T ss_pred ---------------------------------------------CCcccccceECCCCCCEEEEEecCCCCCCCceEEE
Confidence 013577889999 78877766543 36888
Q ss_pred EEcccCccccccCCCCCCCc-ccCeeEEEEeCCCcEEEEeecC-----CcEEEEEccCCCCCceEEeeccCCeeeEEecc
Q psy14906 439 FNIQSGAHRGSYGHDNQPGH-VGGVRGVVSDNLNQIVISGGND-----QTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ 512 (583)
Q Consensus 439 ~d~~~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~ 512 (583)
||+..++..... ... ...+..++|+|||++|+.++.+ +.|++||+.++ +........ ... +.|+|
T Consensus 221 ~d~~~~~~~~l~-----~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g--~~~~l~~~~-~~~-~~~s~ 291 (396)
T 3c5m_A 221 VNEDGSNVRKIK-----EHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETL--ENEEVMVMP-PCS-HLMSN 291 (396)
T ss_dssp EETTSCCCEESS-----CCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTC--CEEEEEECC-SEE-EEEEC
T ss_pred EECCCCceeEee-----ccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCC--CeEEeeeCC-CCC-CCccC
Confidence 898765543332 211 3358889999999988777544 44999999877 443333222 233 89999
Q ss_pred -CCcEEEEEe----------------CCceEEEEEccccceEEeeccccc-----------ceeeEEecCCCcEEEEEeC
Q psy14906 513 -ESSMLAVCL----------------DDFTVNIIDIDTCTIIRKLSGHMG-----------QLTDADFSPDSRWLITASM 564 (583)
Q Consensus 513 -~~~~l~~~~----------------~dg~i~i~d~~~~~~~~~~~~h~~-----------~v~~l~~s~d~~~l~s~~~ 564 (583)
||++++++. .+..|++||+.+++.. .+..+.. .+..++|+|||++|+.++.
T Consensus 292 ~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 292 FDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp SSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred CCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 999888754 3478999999887653 4444544 2677899999999887764
Q ss_pred -CCe--EEEEeCCCccc
Q psy14906 565 -DCT--IRVWDIPSSQL 578 (583)
Q Consensus 565 -d~~--i~vw~~~~~~~ 578 (583)
++. |.+.++.+++.
T Consensus 371 ~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 371 FEGVPAIYIADVPESYK 387 (396)
T ss_dssp TTSSCEEEEEECCTTCC
T ss_pred CCCCceEEEEEEccccc
Confidence 444 55555555544
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.89 E-value=7.2e-21 Score=183.15 Aligned_cols=218 Identities=9% Similarity=0.026 Sum_probs=153.4
Q ss_pred CeEEEEeccceeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCc----------EEEEeeccCCceEEecccC
Q psy14906 92 NIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEE----------TYLELSFDNDTFKIMGKRW 161 (583)
Q Consensus 92 ~~i~vw~~~~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~----------~~~~~~~~~~~~~~~~~~~ 161 (583)
+.+++|+.... +........++++++.++++++.++ +++|+..... .+.... . ...+ .+
T Consensus 23 ~~vri~~~~~~----~~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~---~~ 91 (434)
T 2oit_A 23 KKVRIFDSPEE----LPKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKV--Q-GLLV---PM 91 (434)
T ss_dssp CEEECSCCCSS----CCCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECC--C-CEEE---CC
T ss_pred eeEEecCCccc----cCCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccC--c-cccc---cC
Confidence 45666654221 1222334445577788888877776 7777653210 011000 0 0000 45
Q ss_pred CcceEEEeeCCCCCEEE----EEecCCeEEEEEccCC--------ce---eEEEeccCCCeEEEEEecCCCCEEEEEcCC
Q psy14906 162 NSCVNVLEPSPVVDIIG----VGLSNKKIILHNILTD--------ES---LMEFIQTWGPVTALSFRTDGPPMMVSGSNT 226 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~----~~~~d~~i~iw~~~~~--------~~---~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d 226 (583)
...|.+++|+|++++|+ +|+.|+.|++||+.++ +. +..+.+|...|.+++|+|++..+|++++.|
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D 171 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD 171 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC
Confidence 67899999999999999 6788999999999765 22 344567889999999999844499999999
Q ss_pred CcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC-------CCCCee
Q psy14906 227 GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH-------SAPPNY 299 (583)
Q Consensus 227 g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~-------~~~v~~ 299 (583)
|+|++||++++...... .+|...|.+++|+|+|++|++|+.||.|++||++ ......+..| ...+.+
T Consensus 172 g~v~iwD~~~~~~~~~~-~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-----~~~~~~~~~~~~~~~~~~~~v~~ 245 (434)
T 2oit_A 172 GSIAVLQVTETVKVCAT-LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-----LQEKKVIPCPPFYESDHPVRVLD 245 (434)
T ss_dssp SCEEEEEESSSEEEEEE-ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-----CCEEEEECCCTTCCTTSCEEEEE
T ss_pred CeEEEEEcCCCcceeec-cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-----CcccccccCCcccCCCCceeEEE
Confidence 99999999988766555 5788999999999999999999999999999653 1223333322 337899
Q ss_pred EEEeeCCCCEEEE-eeCCC------cEEEEEcccc
Q psy14906 300 IQFYGNSSDNILS-AAGDS------TLRIFNTKSE 327 (583)
Q Consensus 300 ~~~~~~~~~~l~~-~~~dg------~i~iwd~~~~ 327 (583)
++|++ ++.++++ ...+| .+++|++...
T Consensus 246 v~w~~-~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 246 VLWIG-TYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEE-TTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEec-CceEEEEEccCCCccCCCCceEEEEeccC
Confidence 99997 5655544 33443 3899999765
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-21 Score=188.20 Aligned_cols=301 Identities=10% Similarity=-0.045 Sum_probs=197.8
Q ss_pred EEEEcCCCcEEEEeeccCCceEEecccCCcceEE-----EeeCCCCCEEEEEec-CC--eEEEEEccCCceeEEEeccCC
Q psy14906 134 KVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNV-----LEPSPVVDIIGVGLS-NK--KIILHNILTDESLMEFIQTWG 205 (583)
Q Consensus 134 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-----~~~s~~~~~l~~~~~-d~--~i~iw~~~~~~~~~~~~~~~~ 205 (583)
..+|..++..+..+. .+...... .+|+|||++|+.++. ++ .|.+||+.+++......++..
T Consensus 13 ~~~~~~~g~~~~~lt-----------~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~ 81 (388)
T 3pe7_A 13 TYQDASTGAQVTRLT-----------PPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGD 81 (388)
T ss_dssp EEECTTTCCEEEECS-----------CTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCB
T ss_pred EEecCCCCcceEEec-----------CCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCC
Confidence 345777788887776 55555555 889999999999887 56 488899998888777667755
Q ss_pred CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEE--EecCCCEEEEE-----------------
Q psy14906 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAH--FLYNEPLLVTS----------------- 266 (583)
Q Consensus 206 ~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~s~----------------- 266 (583)
.+..+.|+|||+ .|+.++.++.|++||+.+++..... ..+...+.... ++|++++++..
T Consensus 82 ~~~~~~~spdg~-~l~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~ 159 (388)
T 3pe7_A 82 NTFGGFLSPDDD-ALFYVKDGRNLMRVDLATLEENVVY-QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFH 159 (388)
T ss_dssp CSSSCEECTTSS-EEEEEETTTEEEEEETTTCCEEEEE-ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHH
T ss_pred CccceEEcCCCC-EEEEEeCCCeEEEEECCCCcceeee-echhhcccccceeECCCCCeeccccccCcccccccccchhh
Confidence 666788999999 7888888889999999998766544 34444444333 48999988743
Q ss_pred -----eCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC------CcEEEEEccccccceeecc
Q psy14906 267 -----SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD------STLRIFNTKSETSNKNLGI 335 (583)
Q Consensus 267 -----~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~ 335 (583)
..+..|.+||+. ++. ...+..+...+..+.|+|.+++.|+....+ ..|.++|...+........
T Consensus 160 ~~~~~~~~~~l~~~d~~--~g~---~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~ 234 (388)
T 3pe7_A 160 EFYFTKPCCRLMRVDLK--TGE---STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTH 234 (388)
T ss_dssp HHGGGCCCEEEEEEETT--TCC---EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCC
T ss_pred hhhccCCcceEEEEECC--CCc---eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeC
Confidence 234567777554 222 233334566788999997367777776653 2566666654322111000
Q ss_pred chhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCc
Q psy14906 336 ASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKP 415 (583)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i 415 (583)
.....+
T Consensus 235 --------------------------------------------------------------------------~~~~~~ 240 (388)
T 3pe7_A 235 --------------------------------------------------------------------------AEGESC 240 (388)
T ss_dssp --------------------------------------------------------------------------CTTEEE
T ss_pred --------------------------------------------------------------------------CCCccc
Confidence 000135
Q ss_pred eEEEEccCCcEEEEEec-C----ceEEEEEcccCccccccCCCCCCCccc---CeeEEEEeCCCcEEEEe---------e
Q psy14906 416 TCVYITHCGNFVLIGYS-S----GHVDRFNIQSGAHRGSYGHDNQPGHVG---GVRGVVSDNLNQIVISG---------G 478 (583)
Q Consensus 416 ~~~~~s~~~~~l~~~~~-d----g~i~i~d~~~~~~~~~~~~~~~~~h~~---~v~~~~~s~~~~~l~s~---------~ 478 (583)
...+|+|||+.|+..+. + +.|++||+.+++....... .++.. ....+.|+|||+.|+.. .
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~---~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 317 (388)
T 3pe7_A 241 THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSM---PACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIE 317 (388)
T ss_dssp EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEE---CCEEEEEECTTSSEEEEEECCC------------C
T ss_pred ccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcC---CCceeeeecCCCCeEccCCCcceeEeeeccccccC
Confidence 67889999998766443 2 2499999998875332211 12111 01223799999987754 4
Q ss_pred cCCcEEEEEccCCCCCceEEeeccC-----------CeeeEEeccCCcEEEEEeC-CceEEEEEc
Q psy14906 479 NDQTVKVWHFKQTGKPPLRSIKLDN-----------GISFFRTHQESSMLAVCLD-DFTVNIIDI 531 (583)
Q Consensus 479 ~dg~i~iwd~~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~l~~~~~-dg~i~i~d~ 531 (583)
.+..|++||+.++ +......+.. .+..++|+|||+.|+..+. ++...||.+
T Consensus 318 ~~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 318 NDPFLYVFNMKNG--TQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp CCCEEEEEETTTT--EEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CCCEEEEEeccCC--ceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 5668999999886 5444444444 4788999999998887664 565556544
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=99.88 E-value=8.8e-20 Score=189.24 Aligned_cols=369 Identities=11% Similarity=-0.000 Sum_probs=226.9
Q ss_pred eEEEEe--eCeEEEEEcCCeEEEEecc-ceeeeeecccCcc-----E--EEEccCCCEEEEEeCC---------CcEEEE
Q psy14906 76 ITCLSS--DFFHIYTSANNIIYAWRRG-IDIVGTYKGHTSP-----V--HLILPFGPHLISVDEE---------SNVKVW 136 (583)
Q Consensus 76 v~~~~~--~~~~~~~~~~~~i~vw~~~-~~~~~~~~~h~~~-----v--~~is~~~~~l~s~~~d---------g~i~iw 136 (583)
..++++ |+++++.+ |++|++||.. ++....+.+|... . ..+||||++|+.++.+ +.+.+|
T Consensus 19 ~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~ 97 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIY 97 (740)
T ss_dssp CCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEE
Confidence 445665 67787777 9999999974 5556667777543 2 3569999999998875 567799
Q ss_pred EcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEE-EeccCCCe--------
Q psy14906 137 DIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLME-FIQTWGPV-------- 207 (583)
Q Consensus 137 d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~-~~~~~~~v-------- 207 (583)
|+.+++.. .+. .+...+...+|||||+.||.+ .++.|++|++.+++..+. ..++...+
T Consensus 98 d~~~~~~~-~l~-----------~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v 164 (740)
T 4a5s_A 98 DLNKRQLI-TEE-----------RIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWV 164 (740)
T ss_dssp ETTTTEEC-CSS-----------CCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHH
T ss_pred ECCCCcEE-Ecc-----------cCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCccccc
Confidence 99998754 333 667789999999999999988 568999999988775432 12332222
Q ss_pred ---------EEEEEecCCCCEEEEEcC-CCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEc
Q psy14906 208 ---------TALSFRTDGPPMMVSGSN-TGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIF 277 (583)
Q Consensus 208 ---------~~~~~~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~ 277 (583)
..+.|||||+ .|+.++. ++.+.+|++....... .+...+..+.+.+.|.. .....|.+||+
T Consensus 165 ~~ee~~~~~~~~~wSpDg~-~la~~~~d~~~v~~~~~~~~~~~~----~~~~~~~~~~yp~~G~~----~~~~~l~v~d~ 235 (740)
T 4a5s_A 165 YEEEVFSAYSALWWSPNGT-FLAYAQFNDTEVPLIEYSFYSDES----LQYPKTVRVPYPKAGAV----NPTVKFFVVNT 235 (740)
T ss_dssp HHHHTSSSSBCEEECTTSS-EEEEEEEECTTCCEEEEEECCSTT----CSSCEEEEEECCBTTSC----CCEEEEEEEET
T ss_pred ccchhcCCCcceEECCCCC-EEEEEEEcccCCceEEEEeecCCC----CCCCcceeecCCCCcCc----CCeeEEEEEEC
Confidence 3589999999 6666554 4558888864221111 24456677788777643 12236778866
Q ss_pred cCCC-CCceeeEEec------cCCCCCeeEEEeeCCCCEEEEeeC----CCcEEEEEccccc----cceeeccchhhhhh
Q psy14906 278 DKAD-GNGRLLRIRE------GHSAPPNYIQFYGNSSDNILSAAG----DSTLRIFNTKSET----SNKNLGIASANRNN 342 (583)
Q Consensus 278 ~~~~-~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~----~~~~~~~~~~~~~~ 342 (583)
+... +.......+. +|...+..++|+| |++.++.... +..|++||+.+++ +......
T Consensus 236 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l------- 307 (740)
T 4a5s_A 236 DSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQH------- 307 (740)
T ss_dssp TSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCE-------
T ss_pred CCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEe-------
Confidence 5300 1110122232 3777789999998 7876665432 3479999998875 2111000
Q ss_pred hhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc
Q psy14906 343 LKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH 422 (583)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 422 (583)
.....+ ..... .......|+|
T Consensus 308 ------------------------------------~~~~~~---------------------~~v~~--~~~~~p~fsp 328 (740)
T 4a5s_A 308 ------------------------------------IEMSTT---------------------GWVGR--FRPSEPHFTL 328 (740)
T ss_dssp ------------------------------------EEECSS---------------------SCSSS--SSCCCCEECT
T ss_pred ------------------------------------eeccCC---------------------ceEcc--CcCCCceEcC
Confidence 000000 00000 0123578999
Q ss_pred CCcEEE-EEec-C--ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEE-Eeec----CCcEEEEEccCCCC
Q psy14906 423 CGNFVL-IGYS-S--GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI-SGGN----DQTVKVWHFKQTGK 493 (583)
Q Consensus 423 ~~~~l~-~~~~-d--g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~~~----dg~i~iwd~~~~~~ 493 (583)
||+.++ ..+. + ..|++||..+++..... .....+..+.. +|++.|+ ++.. .+...||.+.....
T Consensus 329 DG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT------~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~ 401 (740)
T 4a5s_A 329 DGNSFYKIISNEEGYRHICYFQIDKKDCTFIT------KGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDY 401 (740)
T ss_dssp TSSEEEEEEECTTSCEEEEEEETTCSSCEESC------CSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEE
T ss_pred CCCEEEEEEEcCCCceEEEEEECCCCceEecc------cCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCC
Confidence 999877 5543 3 46888898876654432 33455665542 3455554 4433 23455555443211
Q ss_pred CceEEeec-----cCCeeeEEeccCCcEEEEEeCC---ceEEEEEccccceEEeec
Q psy14906 494 PPLRSIKL-----DNGISFFRTHQESSMLAVCLDD---FTVNIIDIDTCTIIRKLS 541 (583)
Q Consensus 494 ~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~ 541 (583)
.....+.. ........|||++++++..... ..+.+++..+++.+..+.
T Consensus 402 ~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~~~~~~l~ 457 (740)
T 4a5s_A 402 TKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLE 457 (740)
T ss_dssp EEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEEE
T ss_pred CcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCCcEEEEec
Confidence 22222321 2467889999999987765543 478888888776655443
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-20 Score=177.30 Aligned_cols=291 Identities=11% Similarity=0.095 Sum_probs=187.0
Q ss_pred EEEEEeCC--CcEEEEEc--CCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEcc-CCcee
Q psy14906 123 HLISVDEE--SNVKVWDI--KAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNIL-TDESL 197 (583)
Q Consensus 123 ~l~s~~~d--g~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~-~~~~~ 197 (583)
+|+.|+.. +.|.+|++ .+++........ ......+..++|+|||++|++++.+ .|.+|++. +++..
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~--------~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~ 74 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTE--------IPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIV 74 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEE--------CCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEc--------cCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEE
Confidence 45555543 56887765 455432211100 0223467889999999999988887 99999997 77765
Q ss_pred EEEecc-CCCeEEEEEecCCCC-EEEEEc-------------CCCcEEEEeCC-CCeehhhhhh---ccccceEEEEEec
Q psy14906 198 MEFIQT-WGPVTALSFRTDGPP-MMVSGS-------------NTGHLTVWNLE-DRQVENQIKK---AHRKVVTGAHFLY 258 (583)
Q Consensus 198 ~~~~~~-~~~v~~~~~~~~~~~-~l~s~~-------------~dg~i~vwd~~-~~~~~~~~~~---~~~~~v~~~~~~~ 258 (583)
...... .+.+..++|+|+|++ +++++. .+|.+.+|++. +++....+.. .+...+.+++|+|
T Consensus 75 ~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp 154 (365)
T 1jof_A 75 HEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP 154 (365)
T ss_dssp EEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT
T ss_pred EeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECC
Confidence 433311 134667899999984 244543 68999999997 4555433311 2456789999999
Q ss_pred CCCEEEEEeC-CCeEEEEEccCCCCCceeeEEec--cCCCCCeeEEEeeCCCCEEEEeeC-CCcEEEEEccc--ccccee
Q psy14906 259 NEPLLVTSSP-DNTLKLWIFDKADGNGRLLRIRE--GHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFNTKS--ETSNKN 332 (583)
Q Consensus 259 ~~~~l~s~~~-d~~i~~w~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~--~~~~~~ 332 (583)
||++|++++. ++.|.+|+++. ++....+..+. .|...+..++|+| +++++++++. ++.+.+|++.. ++....
T Consensus 155 dG~~l~~~~~~~~~v~~~~~~~-~g~~~~~~~~~~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~ 232 (365)
T 1jof_A 155 TETYLYSADLTANKLWTHRKLA-SGEVELVGSVDAPDPGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYT 232 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEECT-TSCEEEEEEEECSSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEcCCCCEEEEEEECC-CCCEEEeeeEecCCCCCCCCEeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEc
Confidence 9998887764 67999998763 22333333333 2456789999997 8988887765 68999998753 322100
Q ss_pred eccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCC
Q psy14906 333 LGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQ 412 (583)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (583)
... +-.+ +... ..+.
T Consensus 233 ~~~-----------------------------------------------------~~~~-----------~~~~-~g~~ 247 (365)
T 1jof_A 233 HHS-----------------------------------------------------FPLI-----------PPGI-PDRD 247 (365)
T ss_dssp EEE-----------------------------------------------------EESS-----------CTTC-CCBC
T ss_pred cce-----------------------------------------------------EEcC-----------CCCc-CCcc
Confidence 000 0000 0000 0000
Q ss_pred ------CCceEEE-EccCCcEEEEEecCc------eEEEEEcc-cCccccccCCCCCCCcccCeeEEEEeC---CCcEEE
Q psy14906 413 ------SKPTCVY-ITHCGNFVLIGYSSG------HVDRFNIQ-SGAHRGSYGHDNQPGHVGGVRGVVSDN---LNQIVI 475 (583)
Q Consensus 413 ------~~i~~~~-~s~~~~~l~~~~~dg------~i~i~d~~-~~~~~~~~~~~~~~~h~~~v~~~~~s~---~~~~l~ 475 (583)
..+..++ |+|||++|+++..+. .|.+|++. +++........ ..+...+..++|+| |+++|+
T Consensus 248 ~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~--~~~~~~~~~~a~sp~~~dg~~l~ 325 (365)
T 1jof_A 248 PETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLS--PTPTSGGHSNAVSPCPWSDEWMA 325 (365)
T ss_dssp TTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEE--ECSSCCTTCCCEEECTTCTTEEE
T ss_pred cccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeee--ecCCCCcccceecCCCcCCCEEE
Confidence 1477899 999999988776533 89999996 55543211000 23445567899999 899999
Q ss_pred EeecC-CcEEEEEccCC
Q psy14906 476 SGGND-QTVKVWHFKQT 491 (583)
Q Consensus 476 s~~~d-g~i~iwd~~~~ 491 (583)
+++.+ +.|.+|+++..
T Consensus 326 v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 326 ITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EECSSSCEEEEEEEETT
T ss_pred EEEcCCCeEEEEEEchh
Confidence 88764 89999999865
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.3e-19 Score=174.03 Aligned_cols=329 Identities=12% Similarity=0.059 Sum_probs=229.1
Q ss_pred CCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC--CCeehhhhhhcccc
Q psy14906 172 PVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE--DRQVENQIKKAHRK 249 (583)
Q Consensus 172 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~--~~~~~~~~~~~~~~ 249 (583)
+.+.++++...++.|.++|..+++.+.++... ..+..+.|+|||+ ++++++.++.|.+||+. +++.+.++.. ..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~~~t~~~v~~i~~--G~ 240 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGR-YLFVIGRDGKVNMIDLWMKEPTTVAEIKI--GS 240 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSC-EEEEEETTSEEEEEETTSSSCCEEEEEEC--CS
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCC-EEEEEcCCCeEEEEECCCCCCcEeEEEec--CC
Confidence 44556677778899999999999999988765 4677999999999 77888889999999996 7777777732 33
Q ss_pred ceEEEEEe----cCCCEEEEEeC-CCeEEEEEccCCCCCceeeEEecc----------CCC-CCeeEEEeeCCCCEEEEe
Q psy14906 250 VVTGAHFL----YNEPLLVTSSP-DNTLKLWIFDKADGNGRLLRIREG----------HSA-PPNYIQFYGNSSDNILSA 313 (583)
Q Consensus 250 ~v~~~~~~----~~~~~l~s~~~-d~~i~~w~~~~~~~~~~~~~~~~~----------~~~-~v~~~~~~~~~~~~l~~~ 313 (583)
....++|+ |||++++++.. ++.+.++|.. ..+.+..+.. |.. .+..+..++....+++..
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~----t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~ 316 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE----TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 316 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT----TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEECC----CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe
Confidence 46789999 69998887765 5899999643 3445444331 112 456777776444555566
Q ss_pred eCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecC
Q psy14906 314 AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFY 393 (583)
Q Consensus 314 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 393 (583)
..+|.|.++|.......... .+.
T Consensus 317 ~~~g~v~~vd~~~~~~~~v~---------------------------------------------------------~i~ 339 (567)
T 1qks_A 317 KETGKILLVDYTDLNNLKTT---------------------------------------------------------EIS 339 (567)
T ss_dssp TTTTEEEEEETTCSSEEEEE---------------------------------------------------------EEE
T ss_pred cCCCeEEEEecCCCccceee---------------------------------------------------------eee
Confidence 66788888887653211100 000
Q ss_pred cccccceeeecccccccCCCCceEEEEccCCcEEEEEe-cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc
Q psy14906 394 KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472 (583)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 472 (583)
.......+.|+|+|++++++. .++.|.++|+.+++....+..-....|.+.-..+ ++|++.
T Consensus 340 -----------------~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g 401 (567)
T 1qks_A 340 -----------------AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFG 401 (567)
T ss_dssp -----------------CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTE
T ss_pred -----------------ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCC
Confidence 003456788999999987765 5789999999999877665320112454322222 688754
Q ss_pred -EEEEee-cCCcEEEEEccCCC-----CCceEEeeccC-CeeeEEeccCCcEEEEEeC-------CceEEEEEcccc---
Q psy14906 473 -IVISGG-NDQTVKVWHFKQTG-----KPPLRSIKLDN-GISFFRTHQESSMLAVCLD-------DFTVNIIDIDTC--- 534 (583)
Q Consensus 473 -~l~s~~-~dg~i~iwd~~~~~-----~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~-------dg~i~i~d~~~~--- 534 (583)
.+++.. .++.|.++|..... .+.++.+...+ .-..+..+|++++|.+... .++|.++|+.+.
T Consensus 402 ~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 481 (567)
T 1qks_A 402 PVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGD 481 (567)
T ss_dssp EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCS
T ss_pred cEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCccccc
Confidence 444543 46899999998732 15667776553 3356889999999998763 359999999877
Q ss_pred --ce-EEeec--------ccccceeeEEecCCCcEEEEEe-----CCCeEEEEeCCCcccccccC
Q psy14906 535 --TI-IRKLS--------GHMGQLTDADFSPDSRWLITAS-----MDCTIRVWDIPSSQLIDCFQ 583 (583)
Q Consensus 535 --~~-~~~~~--------~h~~~v~~l~~s~d~~~l~s~~-----~d~~i~vw~~~~~~~~~~~~ 583 (583)
.. ...+. .-...+..+.|+|||+++..+. .++.|.|+|..+++++++++
T Consensus 482 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 482 GSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp SSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred ccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence 21 12221 1235789999999999877653 37899999999999887753
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6.9e-20 Score=176.30 Aligned_cols=256 Identities=12% Similarity=0.144 Sum_probs=168.0
Q ss_pred CCeEEEEecCCcEEEeecCCCCCCeEEEEe--eCeEEEEEcCCeEEEEeccce-----------eeee-----ecccCcc
Q psy14906 52 GKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DFFHIYTSANNIIYAWRRGID-----------IVGT-----YKGHTSP 113 (583)
Q Consensus 52 ~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~~i~vw~~~~~-----------~~~~-----~~~h~~~ 113 (583)
.+.+++|+.... + +...+.++++ ++.+++++....+++|+.... .... ...|...
T Consensus 22 ~~~vri~~~~~~-----~--~~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (434)
T 2oit_A 22 LKKVRIFDSPEE-----L--PKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFP 94 (434)
T ss_dssp CCEEECSCCCSS-----C--CCSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSC
T ss_pred eeeEEecCCccc-----c--CCCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCc
Confidence 467888764311 2 2334555555 444444444334999875211 0110 1135667
Q ss_pred EEEE--ccCCCEEE----EEeCCCcEEEEEcCCC--------cEEEEeeccCCceEEecccCCcceEEEeeCCC-CCEEE
Q psy14906 114 VHLI--LPFGPHLI----SVDEESNVKVWDIKAE--------ETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV-VDIIG 178 (583)
Q Consensus 114 v~~i--s~~~~~l~----s~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~-~~~l~ 178 (583)
|.++ +|+|++|| +++.|+.|+|||+.++ +.+..+... .+|...|.+++|+|+ +++|+
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~--------~~h~~~V~~v~~~p~~~~~la 166 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLL--------KDAGGMVIDMKWNPTVPSMVA 166 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECC--------CSGGGSEEEEEECSSCTTEEE
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeecc--------CCCCCceEEEEECCCCCCEEE
Confidence 8887 99999999 7888999999998765 222222110 178999999999998 88999
Q ss_pred EEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhh------hccccceE
Q psy14906 179 VGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK------KAHRKVVT 252 (583)
Q Consensus 179 ~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~------~~~~~~v~ 252 (583)
+++.||+|++||++++..+....+|...|.+++|+|+|+ +|++|+.||.|++||.+ ++....+. ..|...|.
T Consensus 167 s~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~ 244 (434)
T 2oit_A 167 VCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVL 244 (434)
T ss_dssp EEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSS-CEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEE
T ss_pred EEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCC-EEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEE
Confidence 999999999999999877777778889999999999998 89999999999999998 44333331 12344899
Q ss_pred EEEEecCCCEEEEEe-CCC------eEEEEEccCCCCC-ceeeEEec-------cCCCCCeeEEEeeCCCCEEEEeeC-C
Q psy14906 253 GAHFLYNEPLLVTSS-PDN------TLKLWIFDKADGN-GRLLRIRE-------GHSAPPNYIQFYGNSSDNILSAAG-D 316 (583)
Q Consensus 253 ~~~~~~~~~~l~s~~-~d~------~i~~w~~~~~~~~-~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~-d 316 (583)
+++|++++.++++.+ .+| .+++|++...... ......+. +...+-..+.+.+ +.+++++++. .
T Consensus 245 ~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~-dw~l~~v~s~~s 323 (434)
T 2oit_A 245 DVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIE-EWDLVLAASAAS 323 (434)
T ss_dssp EEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEG-GGTEEEEEETTC
T ss_pred EEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhc-cCCEEEEecCCC
Confidence 999999888775433 332 3899987643221 11222221 2222333344445 4556655544 4
Q ss_pred CcEEEEEcc
Q psy14906 317 STLRIFNTK 325 (583)
Q Consensus 317 g~i~iwd~~ 325 (583)
+.|.++...
T Consensus 324 ~dv~vl~~~ 332 (434)
T 2oit_A 324 TEVSILARQ 332 (434)
T ss_dssp SBCEEEEEC
T ss_pred CceeEEEec
Confidence 556666643
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-19 Score=167.10 Aligned_cols=287 Identities=10% Similarity=0.056 Sum_probs=202.5
Q ss_pred CCeEEEEec-cceeeeeecccCccEEEEccCCCEEEEEeC----------CCcEEEEEcCCCcEEEEeeccCCceEEecc
Q psy14906 91 NNIIYAWRR-GIDIVGTYKGHTSPVHLILPFGPHLISVDE----------ESNVKVWDIKAEETYLELSFDNDTFKIMGK 159 (583)
Q Consensus 91 ~~~i~vw~~-~~~~~~~~~~h~~~v~~is~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 159 (583)
|+.|.+||. .++.+..+..+..+-..++|||++|++++. ++.|.+||..+++.+.++......+
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~----- 104 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRV----- 104 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBC-----
T ss_pred cCeEEEEECCCCeEEEEecCCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccc-----
Confidence 679999995 456677777776662345999999999863 5789999999999988887432110
Q ss_pred cCCcceEEEeeCCCCCEEEEEec--CCeEEEEEccCCceeEE-EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLS--NKKIILHNILTDESLME-FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED 236 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~--d~~i~iw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 236 (583)
.+......++|+|||++|+++.. ++.|.+||+.+++.+.. +... ....+.+.|++...+++.+.||.+.+|+...
T Consensus 105 ~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~ 182 (361)
T 2oiz_A 105 QGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMTICGDGGLLTINLGE 182 (361)
T ss_dssp CBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEEEETTSSEEEEEECT
T ss_pred ccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEEECCCCcEEEEEECC
Confidence 12345677999999999998874 57899999999988877 5433 2233667888755788889999999999865
Q ss_pred -Ceeh------hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC----------CCCCee
Q psy14906 237 -RQVE------NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH----------SAPPNY 299 (583)
Q Consensus 237 -~~~~------~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~----------~~~v~~ 299 (583)
++.. ..+ .....++ .+.+++++..++..+.++.+.++|+... .......+... ......
T Consensus 183 ~g~~~~~~~~~~~~-~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~--~~~~~~~~~~~~~~~~~~~~~p~g~~~ 258 (361)
T 2oiz_A 183 DGKVASQSRSKQMF-SVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGD--EVKVDGPWSLLNDEDKAKNWVPGGYNL 258 (361)
T ss_dssp TSSEEEEEECCCCS-CTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSS--SCEEEEEEESCCHHHHHTTCEECCSSC
T ss_pred CCcEeeeccccceE-cCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCC--CceecccccccCccccccccccCCeeE
Confidence 4433 112 1122222 3345778877787888999999976432 22222221110 112234
Q ss_pred EEEeeCCCCEEEEeeC-----------CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeec
Q psy14906 300 IQFYGNSSDNILSAAG-----------DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGL 368 (583)
Q Consensus 300 ~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (583)
++|+| ++++++.+.. .+.|.+||+.+.+.+..+...
T Consensus 259 ~a~~~-dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~-------------------------------- 305 (361)
T 2oiz_A 259 VGLHR-ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR-------------------------------- 305 (361)
T ss_dssp EEEET-TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT--------------------------------
T ss_pred EEEec-CCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC--------------------------------
Confidence 78887 6777776543 347899998887655443111
Q ss_pred ccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccC--cc
Q psy14906 369 AREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSG--AH 446 (583)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~--~~ 446 (583)
. +..++|+|||++|++++. +.|.+||..++ +.
T Consensus 306 --------------------------------------------~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~ 339 (361)
T 2oiz_A 306 --------------------------------------------D-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKL 339 (361)
T ss_dssp --------------------------------------------T-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEE
T ss_pred --------------------------------------------C-eeEEEECCCCCEEEEeCC-CeEEEEECCCCccee
Confidence 3 789999999999999887 99999999999 88
Q ss_pred ccccCCCCCCCcccCeeEEEEeCCCc
Q psy14906 447 RGSYGHDNQPGHVGGVRGVVSDNLNQ 472 (583)
Q Consensus 447 ~~~~~~~~~~~h~~~v~~~~~s~~~~ 472 (583)
+..+ ..+......++++|+|+
T Consensus 340 ~~~i-----~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 340 LRTI-----EGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEE-----TTSCSSEEEEEECCCSC
T ss_pred eEEe-----ccCCCCcEEEEecCCCC
Confidence 8776 46677889999999985
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-19 Score=170.90 Aligned_cols=280 Identities=9% Similarity=0.025 Sum_probs=182.7
Q ss_pred EEEEEecC--CeEEEEEc--cCCceeEE--Ee-ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCC-CCeehhhhhhcc
Q psy14906 176 IIGVGLSN--KKIILHNI--LTDESLME--FI-QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE-DRQVENQIKKAH 247 (583)
Q Consensus 176 ~l~~~~~d--~~i~iw~~--~~~~~~~~--~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~-~~~~~~~~~~~~ 247 (583)
.|++|+.. +.|.+|++ .+++.... .. .....+..++|+|+++ +|++++.+ .|.+|++. ++++........
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~-~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~ 81 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERK-NIYGAAMK-KWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSS-EEEEEEBT-EEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCC-EEEEEccc-eEEEEEECCCCCEEEeeEeec
Confidence 35555543 46877765 45543222 21 2334788999999999 78888777 99999997 776644321101
Q ss_pred ccceEEEEEecCCCE--EEEEe-------------CCCeEEEEEccCCCCCceeeEEec----cCCCCCeeEEEeeCCCC
Q psy14906 248 RKVVTGAHFLYNEPL--LVTSS-------------PDNTLKLWIFDKADGNGRLLRIRE----GHSAPPNYIQFYGNSSD 308 (583)
Q Consensus 248 ~~~v~~~~~~~~~~~--l~s~~-------------~d~~i~~w~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~ 308 (583)
.+.+.+++|+|+|++ +++++ .++.+.+|+++.. ++....+. .+...+.+++|+| +++
T Consensus 82 ~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~sp-dG~ 157 (365)
T 1jof_A 82 GGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSET---GKLEKNVQNYEYQENTGIHGMVFDP-TET 157 (365)
T ss_dssp CSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTT---CCEEEEEEEEECCTTCCEEEEEECT-TSS
T ss_pred CCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCC---CcCcceEeeEEeCCCCcceEEEECC-CCC
Confidence 123556889999994 55553 6899999987642 22222222 2456789999998 888
Q ss_pred EEEEeeC-CCcEEEEEcc-ccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCce
Q psy14906 309 NILSAAG-DSTLRIFNTK-SETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNK 386 (583)
Q Consensus 309 ~l~~~~~-dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (583)
+++++.. ++.|++||+. +++.....
T Consensus 158 ~l~~~~~~~~~v~~~~~~~~g~~~~~~----------------------------------------------------- 184 (365)
T 1jof_A 158 YLYSADLTANKLWTHRKLASGEVELVG----------------------------------------------------- 184 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEE-----------------------------------------------------
T ss_pred EEEEEcCCCCEEEEEEECCCCCEEEee-----------------------------------------------------
Confidence 8887654 6799999987 44321100
Q ss_pred EEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec-CceEEEEEcc--cCcccc---ccCC-C-CCCCc
Q psy14906 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS-SGHVDRFNIQ--SGAHRG---SYGH-D-NQPGH 458 (583)
Q Consensus 387 i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~--~~~~~~---~~~~-~-~~~~h 458 (583)
.... ..+...+..++|+|||++++++.. ++.|.+|++. +++... .+.. + ...+|
T Consensus 185 --~~~~----------------~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~ 246 (365)
T 1jof_A 185 --SVDA----------------PDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDR 246 (365)
T ss_dssp --EEEC----------------SSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCB
T ss_pred --eEec----------------CCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCc
Confidence 0000 000145788999999999888765 6899999875 454321 1111 0 00123
Q ss_pred cc------CeeEEE-EeCCCcEEEEeecC-C-----cEEEEEcc-CCCCCceE---Eee-ccCCeeeEEecc---CCcEE
Q psy14906 459 VG------GVRGVV-SDNLNQIVISGGND-Q-----TVKVWHFK-QTGKPPLR---SIK-LDNGISFFRTHQ---ESSML 517 (583)
Q Consensus 459 ~~------~v~~~~-~s~~~~~l~s~~~d-g-----~i~iwd~~-~~~~~~~~---~~~-~~~~v~~~~~s~---~~~~l 517 (583)
.. .+..++ |+|||++|+++..+ . .|.+|++. ++ ++.. ... ....+..++|+| ||++|
T Consensus 247 ~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g--~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l 324 (365)
T 1jof_A 247 DPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCG--SIEKQLFLSPTPTSGGHSNAVSPCPWSDEWM 324 (365)
T ss_dssp CTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTS--CEEEEEEEEECSSCCTTCCCEEECTTCTTEE
T ss_pred ccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCC--CEEEeeeeeecCCCCcccceecCCCcCCCEE
Confidence 33 588999 99999988776543 2 89999996 44 4433 132 234678899999 89999
Q ss_pred EEEeCC-ceEEEEEcccc
Q psy14906 518 AVCLDD-FTVNIIDIDTC 534 (583)
Q Consensus 518 ~~~~~d-g~i~i~d~~~~ 534 (583)
++++.+ +.|.+|+++..
T Consensus 325 ~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 325 AITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEECSSSCEEEEEEEETT
T ss_pred EEEEcCCCeEEEEEEchh
Confidence 998875 89999999765
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-17 Score=164.81 Aligned_cols=333 Identities=11% Similarity=0.047 Sum_probs=230.6
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEcc--C
Q psy14906 116 LILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNIL--T 193 (583)
Q Consensus 116 ~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~--~ 193 (583)
...|.+.++++...+++|.++|..+++.+.++.. ...+..++|+|||+++.+++.++.|.+||+. +
T Consensus 162 ~~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~------------g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t 229 (567)
T 1qks_A 162 DWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDT------------GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE 229 (567)
T ss_dssp CCCGGGEEEEEETTTTEEEEEETTTCCEEEEEEC------------SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSS
T ss_pred ccCCCceEEEEeCCCCeEEEEECCCCeEEEEEeC------------CCCccceEECCCCCEEEEEcCCCeEEEEECCCCC
Confidence 3456566777777889999999999999988862 3356689999999999999999999999995 8
Q ss_pred CceeEEEeccCCCeEEEEEe----cCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhc---------ccc-ceEEEEEecC
Q psy14906 194 DESLMEFIQTWGPVTALSFR----TDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA---------HRK-VVTGAHFLYN 259 (583)
Q Consensus 194 ~~~~~~~~~~~~~v~~~~~~----~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~---------~~~-~v~~~~~~~~ 259 (583)
++.+.++... .....++|+ |||++++++...++++.++|..+.+.+..+... |.. .+..+..+++
T Consensus 230 ~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~ 308 (567)
T 1qks_A 230 PTTVAEIKIG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHY 308 (567)
T ss_dssp CCEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSS
T ss_pred CcEeEEEecC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCC
Confidence 8888888765 456899999 699955555566799999999998887765311 222 6778888888
Q ss_pred CCEE-EEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee-CCCcEEEEEccccccceeecc-c
Q psy14906 260 EPLL-VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA-GDSTLRIFNTKSETSNKNLGI-A 336 (583)
Q Consensus 260 ~~~l-~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-~ 336 (583)
+..+ +....+|.|.++|+... ....+..+ ........+.|+| ++++++++. .++.|.++|+.+++....+.. .
T Consensus 309 ~~~~vv~~~~~g~v~~vd~~~~--~~~~v~~i-~~~~~~~d~~~~p-dgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg 384 (567)
T 1qks_A 309 RPEFIVNVKETGKILLVDYTDL--NNLKTTEI-SAERFLHDGGLDG-SHRYFITAANARNKLVVIDTKEGKLVAIEDTGG 384 (567)
T ss_dssp SSEEEEEETTTTEEEEEETTCS--SEEEEEEE-ECCSSEEEEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS
T ss_pred CCEEEEEecCCCeEEEEecCCC--ccceeeee-eccccccCceECC-CCCEEEEEeCCCCeEEEEECCCCcEEEEEeccC
Confidence 6654 44455688888865421 11222222 2234456788997 788877665 578999999988765433211 0
Q ss_pred hhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCce
Q psy14906 337 SANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT 416 (583)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 416 (583)
. ..|...-.
T Consensus 385 ~-----------------------------------------------------------------------~Phpg~g~ 393 (567)
T 1qks_A 385 Q-----------------------------------------------------------------------TPHPGRGA 393 (567)
T ss_dssp S-----------------------------------------------------------------------SBCCTTCE
T ss_pred c-----------------------------------------------------------------------CCCCccce
Confidence 0 00001111
Q ss_pred EEEEccCCcEEE-EEe-cCceEEEEEccc-------CccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec-------C
Q psy14906 417 CVYITHCGNFVL-IGY-SSGHVDRFNIQS-------GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN-------D 480 (583)
Q Consensus 417 ~~~~s~~~~~l~-~~~-~dg~i~i~d~~~-------~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-------d 480 (583)
. -++|++..+. ++. .++.|.++|..+ .+.+..+ ......-..+..+|++++|..... .
T Consensus 394 ~-~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i-----~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~ 467 (567)
T 1qks_A 394 N-FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSF-----PALGGGSLFIKTHPNSQYLYVDATLNPEAEIS 467 (567)
T ss_dssp E-EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE-----ECSCSCCCCEECCTTCSEEEEECTTCSSHHHH
T ss_pred e-eECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEE-----ecCCCCCEEEEeCCCCCeEEEecCCCCCcccC
Confidence 2 2578755444 443 468999999987 3344444 222233345778999998887652 3
Q ss_pred CcEEEEEccCCC----CCceEEee---------ccCCeeeEEeccCCcEEEEEe-----CCceEEEEEccccceEEeecc
Q psy14906 481 QTVKVWHFKQTG----KPPLRSIK---------LDNGISFFRTHQESSMLAVCL-----DDFTVNIIDIDTCTIIRKLSG 542 (583)
Q Consensus 481 g~i~iwd~~~~~----~~~~~~~~---------~~~~v~~~~~s~~~~~l~~~~-----~dg~i~i~d~~~~~~~~~~~~ 542 (583)
.+|.++|+.+.. ......+. ....+..+.|+|+|+++.++. .++.|.++|.++++++.+++.
T Consensus 468 ~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 468 GSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD 547 (567)
T ss_dssp TCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred ceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence 589999998761 12223332 134688999999999877763 378999999999999888875
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-19 Score=184.94 Aligned_cols=328 Identities=9% Similarity=-0.028 Sum_probs=208.1
Q ss_pred cCCcceEEEeeCCCCCEEEEE--ecCCeEEEEEccCCceeEEEeccCCCeE---------EEEEe--cCCCC-EEEEEcC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVG--LSNKKIILHNILTDESLMEFIQTWGPVT---------ALSFR--TDGPP-MMVSGSN 225 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~--~~d~~i~iw~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-~l~s~~~ 225 (583)
+|...+..++|++++-+++.. ..++...||....+.....+..+...+. ...|+ |||+. ++++...
T Consensus 21 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~ 100 (662)
T 3azo_A 21 SRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG 100 (662)
T ss_dssp HTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT
T ss_pred hcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECC
Confidence 678899999999876666666 5578899999765666677777766666 66676 99995 4445445
Q ss_pred CCcEEEEeCC--C-Ceehhhhhhc-----cccceEEEEEecCCCEEEEEeCC----------CeEEEEEccCCC-CCcee
Q psy14906 226 TGHLTVWNLE--D-RQVENQIKKA-----HRKVVTGAHFLYNEPLLVTSSPD----------NTLKLWIFDKAD-GNGRL 286 (583)
Q Consensus 226 dg~i~vwd~~--~-~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~d----------~~i~~w~~~~~~-~~~~~ 286 (583)
+..|.++++. . ++ ...+ .. |...+..++|+|||+.|++++.+ ..|.+|+++... .....
T Consensus 101 ~~~l~~~~~~~~g~~~-~~~l-~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 178 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAV-PRPL-TPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA 178 (662)
T ss_dssp TCCEEEECTTSTTCCC-CEEC-SCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG
T ss_pred CCeEEEEcCCCCCCCC-CEec-cCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc
Confidence 6778888876 2 43 3333 23 56788999999999999988876 578888664310 00022
Q ss_pred eEEec-cCCCCCeeEEEeeCCCCEEEEeeCC--------CcEEEEEcc-ccc--cceeeccchhhhhhhhhhcchhcccc
Q psy14906 287 LRIRE-GHSAPPNYIQFYGNSSDNILSAAGD--------STLRIFNTK-SET--SNKNLGIASANRNNLKRKNRLEKMNE 354 (583)
Q Consensus 287 ~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d--------g~i~iwd~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (583)
...+. .+...+..++|+| ||++|+.++.+ ..|++||+. ++. ....+
T Consensus 179 ~~~l~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l--------------------- 236 (662)
T 3azo_A 179 VRELSDDAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL--------------------- 236 (662)
T ss_dssp SEESSCSCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE---------------------
T ss_pred eeEEEecCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe---------------------
Confidence 34444 5556778899998 89999887754 368888876 341 11110
Q ss_pred ccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCc
Q psy14906 355 KFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434 (583)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 434 (583)
...+...+..+.|+|||++++++..++
T Consensus 237 -----------------------------------------------------~~~~~~~~~~~~~spdg~l~~~~~~~~ 263 (662)
T 3azo_A 237 -----------------------------------------------------LGGPEEAIAQAEWAPDGSLIVATDRTG 263 (662)
T ss_dssp -----------------------------------------------------EEETTBCEEEEEECTTSCEEEEECTTS
T ss_pred -----------------------------------------------------CCCCCceEcceEECCCCeEEEEECCCC
Confidence 000114577899999999888888788
Q ss_pred --eEEEEEcccCccccccCCCCCCCcccC--------eeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc-C
Q psy14906 435 --HVDRFNIQSGAHRGSYGHDNQPGHVGG--------VRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-N 503 (583)
Q Consensus 435 --~i~i~d~~~~~~~~~~~~~~~~~h~~~--------v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~ 503 (583)
.|++||+.+++..... ..+... +..++|+|++++++++.. +.++||.++... ..+..+..+ .
T Consensus 264 ~~~l~~~~~~~~~~~~l~-----~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~-~~~~~l~~~~~ 336 (662)
T 3azo_A 264 WWNLHRVDPATGAATQLC-----RREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPES-GELVDAAGPWT 336 (662)
T ss_dssp SCEEEEECTTTCCEEESS-----CCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTT-TEEEECCSSCC
T ss_pred CeEEEEEECCCCceeecc-----cccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCC-CcEEEecCCCC
Confidence 6777777666654433 222221 567899999999999998 999999554321 224444433 3
Q ss_pred CeeeEEeccCCc--EEEEEeCCc--eEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEe
Q psy14906 504 GISFFRTHQESS--MLAVCLDDF--TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 504 ~v~~~~~s~~~~--~l~~~~~dg--~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~ 572 (583)
.+..+ +++++. +++.++.+. .|+++|+.+++.......|...+....+++.....+.+..+..|..|-
T Consensus 337 ~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~dg~~i~~~~ 408 (662)
T 3azo_A 337 EWAAT-LTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPAYYPEPQIRTFTAPDGREIHAHI 408 (662)
T ss_dssp EEEEE-EEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGGSCCCEEEEEECTTSCEEEEEE
T ss_pred eEEEE-EecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCCccccCcceEEEEEcCCCCEEEEEE
Confidence 45555 145554 344445554 566667777775544444544444445544444444443333555554
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.3e-20 Score=178.33 Aligned_cols=295 Identities=11% Similarity=-0.005 Sum_probs=191.0
Q ss_pred EccCCCEEEEEeCC---CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccC
Q psy14906 117 ILPFGPHLISVDEE---SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILT 193 (583)
Q Consensus 117 is~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~ 193 (583)
++|||++|+.+... ..|.+||+.+++...... ........+.|+|||+.|+.++.++.|++||+.+
T Consensus 43 ~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~-----------~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~ 111 (396)
T 3c5m_A 43 FTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE-----------GKGDNTFGGFISTDERAFFYVKNELNLMKVDLET 111 (396)
T ss_dssp BCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC-----------SSCBCTTTCEECTTSSEEEEEETTTEEEEEETTT
T ss_pred CCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec-----------CCCCccccceECCCCCEEEEEEcCCcEEEEECCC
Confidence 49999998877543 478899998887543322 2222233478999999999999999999999998
Q ss_pred CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEE-----eC
Q psy14906 194 DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS-----SP 268 (583)
Q Consensus 194 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-----~~ 268 (583)
++.......+.. |+++++ .|+....++...+|.. .+.|+|+++.++.. ..
T Consensus 112 ~~~~~~~~~~~~------~~~~g~-~l~~~~~~~~~~~~~~------------------~~~~spdg~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 112 LEEQVIYTVDEE------WKGYGT-WVANSDCTKLVGIEIL------------------KRDWQPLTSWEKFAEFYHTNP 166 (396)
T ss_dssp CCEEEEEECCTT------EEEEEE-EEECTTSSEEEEEEEE------------------GGGCCCCCSHHHHHHHHHTCC
T ss_pred CCcEEEEecccc------cCCCCC-EEEeccCCcccccccc------------------ccccCCCCcceeeeeeccCCC
Confidence 887666655533 778887 6776666655555431 23467888877654 35
Q ss_pred CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC------CcEEEEEccccccceeeccchhhhhh
Q psy14906 269 DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD------STLRIFNTKSETSNKNLGIASANRNN 342 (583)
Q Consensus 269 d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~ 342 (583)
+..|.+|+++ .+. .. .+..+...+..+.|+|.+++.|+..+.+ ..|.+||+..+.......
T Consensus 167 ~~~l~~~d~~--~g~--~~-~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-------- 233 (396)
T 3c5m_A 167 TCRLIKVDIE--TGE--LE-VIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-------- 233 (396)
T ss_dssp CEEEEEEETT--TCC--EE-EEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC--------
T ss_pred cceEEEEECC--CCc--EE-eeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec--------
Confidence 5677888654 222 22 2224566788999997456666665543 346667765432111000
Q ss_pred hhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc
Q psy14906 343 LKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH 422 (583)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 422 (583)
......+..++|+|
T Consensus 234 ------------------------------------------------------------------~~~~~~~~~~~~sp 247 (396)
T 3c5m_A 234 ------------------------------------------------------------------HAEGESCTHEFWIP 247 (396)
T ss_dssp ------------------------------------------------------------------CCTTEEEEEEEECT
T ss_pred ------------------------------------------------------------------cCCCccccceEECC
Confidence 00002366789999
Q ss_pred CCcEEEEEecC-----ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC-CCcEEEEee----------------cC
Q psy14906 423 CGNFVLIGYSS-----GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN-LNQIVISGG----------------ND 480 (583)
Q Consensus 423 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~----------------~d 480 (583)
||++|+..+.+ +.|++||+.+++....... .+ .. +.|+| |++++++++ .+
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~---~~----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~ 319 (396)
T 3c5m_A 248 DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM---PP----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEND 319 (396)
T ss_dssp TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC---CS----EE-EEEECSSSSEEEEEECCC----------CCCCC
T ss_pred CCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC---CC----CC-CCccCCCCceEEEecCCcceeeccccccccCCC
Confidence 99988777554 5599999988765433211 12 22 89999 999888754 34
Q ss_pred CcEEEEEccCCCCCceEEeeccC-----------CeeeEEeccCCcEEEEEeC-Cce--EEEEEccccce
Q psy14906 481 QTVKVWHFKQTGKPPLRSIKLDN-----------GISFFRTHQESSMLAVCLD-DFT--VNIIDIDTCTI 536 (583)
Q Consensus 481 g~i~iwd~~~~~~~~~~~~~~~~-----------~v~~~~~s~~~~~l~~~~~-dg~--i~i~d~~~~~~ 536 (583)
..|++||+.++ +......+.. .+..++|+|||+.|+..+. ++. |+.+++.+++.
T Consensus 320 ~~i~~~d~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 320 PFLYVLNTKAK--SAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp CEEEEEETTTT--BCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred CcEEEEecccC--ceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence 78999999877 4433333333 2567899999998887765 444 44555555544
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4.5e-19 Score=182.41 Aligned_cols=291 Identities=10% Similarity=0.019 Sum_probs=191.0
Q ss_pred EeccCCCeEEEEEecCCCCEEEEE--cCCCcEEEEeCCCCeehhhhhhccccceE---------EEEEe--cCCCE-EEE
Q psy14906 200 FIQTWGPVTALSFRTDGPPMMVSG--SNTGHLTVWNLEDRQVENQIKKAHRKVVT---------GAHFL--YNEPL-LVT 265 (583)
Q Consensus 200 ~~~~~~~v~~~~~~~~~~~~l~s~--~~dg~i~vwd~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~s 265 (583)
+.+|...+..++|++++- +++.. +.++...||....+.....+ ..|...+. ...|+ |||+. |+.
T Consensus 19 ~~~~~~~~~~~~~s~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~ 96 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEV-WWVAPRPAEAGRATLVRRRADGAEESA-LPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVF 96 (662)
T ss_dssp HHHTCSCCEEEEEETTEE-EEEEEETTTTTEEEEEEECTTSCEEES-SCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEE
T ss_pred HhhcCCccceeEEcCCeE-EEEecCcccCCcEEEEEECCCCCccee-CCCCccccccccccCCccceeeeecCCCeEEEE
Confidence 456778999999998765 55555 55788999986444444444 34555555 56666 99998 776
Q ss_pred EeCCCeEEEEEccCCCCCc-eeeEEecc-----CCCCCeeEEEeeCCCCEEEEeeCC----------CcEEEEEccc---
Q psy14906 266 SSPDNTLKLWIFDKADGNG-RLLRIREG-----HSAPPNYIQFYGNSSDNILSAAGD----------STLRIFNTKS--- 326 (583)
Q Consensus 266 ~~~d~~i~~w~~~~~~~~~-~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~--- 326 (583)
++.. ...||.++... .+ .....+.. |...+..++|+| ||+.|++++.+ ..|++||+.+
T Consensus 97 ~~~~-~~~l~~~~~~~-~g~~~~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 173 (662)
T 3azo_A 97 THFG-DQRLYAFEPDA-PGGAVPRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAA 173 (662)
T ss_dssp EBTT-TCCEEEECTTS-TTCCCCEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTT
T ss_pred EECC-CCeEEEEcCCC-CCCCCCEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCcc
Confidence 6542 34455445430 01 12333444 556788999998 89999988876 4677777765
Q ss_pred ---cccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeee
Q psy14906 327 ---ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLV 403 (583)
Q Consensus 327 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 403 (583)
+.. ..+.
T Consensus 174 ~~~~~~-~~l~--------------------------------------------------------------------- 183 (662)
T 3azo_A 174 ADRSAV-RELS--------------------------------------------------------------------- 183 (662)
T ss_dssp TCGGGS-EESS---------------------------------------------------------------------
T ss_pred ccCCce-eEEE---------------------------------------------------------------------
Confidence 221 1110
Q ss_pred cccccccCCCCceEEEEccCCcEEEEEecC--------ceEEEEEcc-cC---ccccccCCCCCCCcccCeeEEEEeCCC
Q psy14906 404 PERCKQAKQSKPTCVYITHCGNFVLIGYSS--------GHVDRFNIQ-SG---AHRGSYGHDNQPGHVGGVRGVVSDNLN 471 (583)
Q Consensus 404 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--------g~i~i~d~~-~~---~~~~~~~~~~~~~h~~~v~~~~~s~~~ 471 (583)
..+...+..++|+|||++|+..+.+ ..|++||+. ++ +..... ..|...+..++|+|||
T Consensus 184 -----~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~-----~~~~~~~~~~~~spdg 253 (662)
T 3azo_A 184 -----DDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL-----GGPEEAIAQAEWAPDG 253 (662)
T ss_dssp -----CSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE-----EETTBCEEEEEECTTS
T ss_pred -----ecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC-----CCCCceEcceEECCCC
Confidence 0001345668899999999987754 479999998 56 333332 3457889999999999
Q ss_pred cEEEEeecCC--cEEEEEccCCCCCceEEeeccCC---------eeeEEeccCCcEEEEEeCCceEEEE--EccccceEE
Q psy14906 472 QIVISGGNDQ--TVKVWHFKQTGKPPLRSIKLDNG---------ISFFRTHQESSMLAVCLDDFTVNII--DIDTCTIIR 538 (583)
Q Consensus 472 ~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~---------v~~~~~s~~~~~l~~~~~dg~i~i~--d~~~~~~~~ 538 (583)
++++++..++ .|.+||+.++ +.......+.. +..++|+|++++++++.. +.++|| |+.+++ +.
T Consensus 254 ~l~~~~~~~~~~~l~~~~~~~~--~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~ 329 (662)
T 3azo_A 254 SLIVATDRTGWWNLHRVDPATG--AATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LV 329 (662)
T ss_dssp CEEEEECTTSSCEEEEECTTTC--CEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EE
T ss_pred eEEEEECCCCCeEEEEEECCCC--ceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EE
Confidence 9888888888 5566665555 44433333221 567899999999999998 999999 555454 67
Q ss_pred eecccccceeeE-EecCCCcEEEEEeCCC--eEEEEeCCCcccc
Q psy14906 539 KLSGHMGQLTDA-DFSPDSRWLITASMDC--TIRVWDIPSSQLI 579 (583)
Q Consensus 539 ~~~~h~~~v~~l-~~s~d~~~l~s~~~d~--~i~vw~~~~~~~~ 579 (583)
.+..|...+..+ +++.+.-++++++.+. .|.+||+.+++..
T Consensus 330 ~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 330 DAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRAR 373 (662)
T ss_dssp ECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred EecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceE
Confidence 788787778777 5544333344555554 4666677677653
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-17 Score=152.53 Aligned_cols=245 Identities=18% Similarity=0.244 Sum_probs=177.2
Q ss_pred ccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEec------cCCCCCeeEEEeeCCCCEEEEeeC-CCc
Q psy14906 246 AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE------GHSAPPNYIQFYGNSSDNILSAAG-DST 318 (583)
Q Consensus 246 ~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~-dg~ 318 (583)
++-..+.+++++++++++++...++.|.+|+.+ +..+..+. ++...+..+++.+.++..+++... ++.
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-----g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~ 101 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-----GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQ 101 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-----SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-----CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCE
Confidence 455678999999999988888889999999543 33344442 233567889996435655555533 788
Q ss_pred EEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccc
Q psy14906 319 LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMD 398 (583)
Q Consensus 319 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 398 (583)
|.+|| .+++....+..
T Consensus 102 i~~~d-~~g~~~~~~~~--------------------------------------------------------------- 117 (286)
T 1q7f_A 102 IQIYN-QYGQFVRKFGA--------------------------------------------------------------- 117 (286)
T ss_dssp EEEEC-TTSCEEEEECT---------------------------------------------------------------
T ss_pred EEEEC-CCCcEEEEecC---------------------------------------------------------------
Confidence 99998 34433222100
Q ss_pred ceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee
Q psy14906 399 DMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG 478 (583)
Q Consensus 399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 478 (583)
.....+..++++|+|+++++...++.|.+||.. ++....+.. ..+...+.+++++|+++++++..
T Consensus 118 -----------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~---~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 118 -----------TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGC---SKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp -----------TTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC---TTTCSSEEEEEECSSSEEEEEEG
T ss_pred -----------ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCC---CCccCCcEEEEECCCCCEEEEEC
Confidence 001357889999999988887788999999964 554444421 24456789999999999888888
Q ss_pred cCCcEEEEEccCCCCCceEEeecc---CCeeeEEeccCCcEEEEEeCCc-eEEEEEccccceEEeeccccc--ceeeEEe
Q psy14906 479 NDQTVKVWHFKQTGKPPLRSIKLD---NGISFFRTHQESSMLAVCLDDF-TVNIIDIDTCTIIRKLSGHMG--QLTDADF 552 (583)
Q Consensus 479 ~dg~i~iwd~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~h~~--~v~~l~~ 552 (583)
.++.|++||... +.+..+... ..+..++++++|+++++...++ .|.+||. +++.+..+..+.. .+.++++
T Consensus 183 ~~~~i~~~~~~g---~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~ 258 (286)
T 1q7f_A 183 RAHCVKVFNYEG---QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVAL 258 (286)
T ss_dssp GGTEEEEEETTC---CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEE
T ss_pred CCCEEEEEcCCC---CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEE
Confidence 899999999754 455555433 4688999999999888888776 9999995 4666666665443 4779999
Q ss_pred cCCCcEEEEEeCCCeEEEEeCCCcccc
Q psy14906 553 SPDSRWLITASMDCTIRVWDIPSSQLI 579 (583)
Q Consensus 553 s~d~~~l~s~~~d~~i~vw~~~~~~~~ 579 (583)
+|+|+++++ +.|++|++|++....++
T Consensus 259 ~~~g~l~vs-~~~~~v~v~~~~~~~pv 284 (286)
T 1q7f_A 259 MDDGSVVLA-SKDYRLYIYRYVQLAPV 284 (286)
T ss_dssp ETTTEEEEE-ETTTEEEEEECSCCCCT
T ss_pred CCCCcEEEE-CCCCeEEEEEccccccc
Confidence 999987777 67999999999776554
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.81 E-value=3.5e-17 Score=153.97 Aligned_cols=272 Identities=10% Similarity=0.073 Sum_probs=179.3
Q ss_pred CcceEEEeeCCCCCEEEEEe---------cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCC---C--
Q psy14906 162 NSCVNVLEPSPVVDIIGVGL---------SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT---G-- 227 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~---------~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---g-- 227 (583)
...+...++ ||+.++... .++.|.+||+.+++... + ..+..++|+|||+ .|+..+.+ +
T Consensus 14 ~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~-~la~~~~~~~~~~~ 85 (347)
T 2gop_A 14 FAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGK-KIAFMRANEEKKVS 85 (347)
T ss_dssp SCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSS-EEEEEEEETTTTEE
T ss_pred eEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCC-EEEEEEeccCCCcc
Confidence 345677777 899887653 25679999998876543 3 4688999999999 56655433 3
Q ss_pred cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC---------------------------CeEEEEEccCC
Q psy14906 228 HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD---------------------------NTLKLWIFDKA 280 (583)
Q Consensus 228 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------------------------~~i~~w~~~~~ 280 (583)
.|.+||+.+++..... . +.. +..++|+|||+.|+.++.+ ..|.+|+++
T Consensus 86 ~l~~~~~~~g~~~~l~-~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~-- 160 (347)
T 2gop_A 86 EIWVADLETLSSKKIL-E-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTE-- 160 (347)
T ss_dssp EEEEEETTTTEEEEEE-E-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETT--
T ss_pred eEEEEECCCCceEEEE-c-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECC--
Confidence 3888899887765544 2 333 9999999999988887632 456677553
Q ss_pred CCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC-------cEEEEEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 281 DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS-------TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 281 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
. ++.+..+.. . .+..+.|+| ++ .++++..++ ...+|.+.+++. ..+
T Consensus 161 ~--~~~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l-------------------- 213 (347)
T 2gop_A 161 S--EEVIEEFEK-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKM-------------------- 213 (347)
T ss_dssp T--TEEEEEEEE-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEE--------------------
T ss_pred C--CeEEeeecC-C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeCCCce-EEe--------------------
Confidence 2 233233333 3 788999997 77 777765542 233443322211 000
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 433 (583)
. . + ..+..+ +|||++|+..+.+
T Consensus 214 ------------------------------------~-------------~------~-~~~~~~--spdg~~l~~~~~~ 235 (347)
T 2gop_A 214 ------------------------------------F-------------E------K-VSFYAV--DSDGERILLYGKP 235 (347)
T ss_dssp ------------------------------------E-------------E------E-ESEEEE--EECSSCEEEEECC
T ss_pred ------------------------------------c-------------c------C-cceeeE--CCCCCEEEEEEcc
Confidence 0 0 0 112233 8999988877643
Q ss_pred --------ceEEEEEcccCccccccCCCCCCCcccCeeE-EEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCC
Q psy14906 434 --------GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRG-VVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNG 504 (583)
Q Consensus 434 --------g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~-~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 504 (583)
..|++|| +++..... ..|...+.. +.|+ ++ ++++++.++.+++| +.++ +..........
T Consensus 236 ~~~~~~~~~~l~~~d--~~~~~~l~-----~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g--~~~~~~~~~~~ 303 (347)
T 2gop_A 236 EKKYMSEHNKLYIYD--GKEVMGIL-----DEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG--EIKPIAKGRHW 303 (347)
T ss_dssp SSSCCCSSCEEEEEC--SSCEEESS-----TTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS--SEEEEECSSSE
T ss_pred ccCCccccceEEEEC--CCceEecc-----ccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC--ceEEEecCCCe
Confidence 4688888 55544333 466778886 9999 88 88999999999999 8854 55555555677
Q ss_pred eeeEEeccCCcEEEEEeCCceE-EEEEccccceEEeecccccce
Q psy14906 505 ISFFRTHQESSMLAVCLDDFTV-NIIDIDTCTIIRKLSGHMGQL 547 (583)
Q Consensus 505 v~~~~~s~~~~~l~~~~~dg~i-~i~d~~~~~~~~~~~~h~~~v 547 (583)
+.+++|+| .++++++.++.. .+|.++ ++ ...+..|...+
T Consensus 304 v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~~ 343 (347)
T 2gop_A 304 IMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDPI 343 (347)
T ss_dssp EEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTSTT
T ss_pred EEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHhH
Confidence 89999999 677777766654 777766 54 44566665543
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.1e-17 Score=155.50 Aligned_cols=255 Identities=11% Similarity=0.068 Sum_probs=183.5
Q ss_pred CCCeEEEEEecCCCCEEEEEcCC------------------------CcEEEEeCCCCeehhhhhhccccceEEEEEecC
Q psy14906 204 WGPVTALSFRTDGPPMMVSGSNT------------------------GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN 259 (583)
Q Consensus 204 ~~~v~~~~~~~~~~~~l~s~~~d------------------------g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 259 (583)
-+.+.+++++|+|+ ++++...+ +.|.+||..+++.+..+..++-.....++++|+
T Consensus 23 l~~v~~va~d~~G~-l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKNN-LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTCC-EEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred cCCceEEEECCCCC-EEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 36799999999998 77777766 479999999888876653345567899999999
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCCceeeEEe---------ccCCCCCeeEEEeeCCCCEEEEee-CCCcEEEEEcccccc
Q psy14906 260 EPLLVTSSPDNTLKLWIFDKADGNGRLLRIR---------EGHSAPPNYIQFYGNSSDNILSAA-GDSTLRIFNTKSETS 329 (583)
Q Consensus 260 ~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~ 329 (583)
|+++++...++.|++|+.+. ....+..+ .++...+..++++|.++.++++.+ .++.|++||. ++..
T Consensus 102 g~l~v~d~~~~~v~~~~~~g---~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~ 177 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHS---KEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKF 177 (329)
T ss_dssp SCEEEEETTTTEEEEECTTC---SSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCE
T ss_pred CCEEEEECCCCEEEEEeCCC---CeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCE
Confidence 99888888889999996532 11133443 234446789999975677777775 6899999994 4443
Q ss_pred ceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccc
Q psy14906 330 NKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQ 409 (583)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 409 (583)
...+..... .+ . ...
T Consensus 178 ~~~~~~~g~--------------------------------------------~~---------~------------~~~ 192 (329)
T 3fvz_A 178 VTQWGEESS--------------------------------------------GS---------S------------PRP 192 (329)
T ss_dssp EEEECEECC--------------------------------------------SS---------S------------CCT
T ss_pred EEEeccCCC--------------------------------------------CC---------C------------CCC
Confidence 332211000 00 0 000
Q ss_pred cCCCCceEEEEccC-CcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC------CCcEEEEeecCCc
Q psy14906 410 AKQSKPTCVYITHC-GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN------LNQIVISGGNDQT 482 (583)
Q Consensus 410 ~~~~~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~------~~~~l~s~~~dg~ 482 (583)
.....+..++++|+ ++++++...++.|++|+..+++.+..+.. ..+...+.+++++| +++..++...+..
T Consensus 193 ~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~---~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~ 269 (329)
T 3fvz_A 193 GQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH---ASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQ 269 (329)
T ss_dssp TEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC---TTTTTCEEEEEEETTEEEEEECCCCTTCSCCCC
T ss_pred cccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec---cccCCCcceeeecCCEEEEeCCCEEeccCCCcE
Confidence 00035789999998 77777778899999999998888877643 35667888999999 3333333334558
Q ss_pred EEEEEccCCCCCceEEee----ccCCeeeEEeccCCcEEEEEeCCceEEEEEccc
Q psy14906 483 VKVWHFKQTGKPPLRSIK----LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533 (583)
Q Consensus 483 i~iwd~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 533 (583)
|++|++.++ +.+..+. +...+..++++|+|.++++...++.|++|++..
T Consensus 270 v~~~~~~~g--~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 270 GFVMNFSSG--EIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEETTTC--CEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEEEEcCCC--eEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 999999988 7777763 335689999999998888888899999999864
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3.1e-17 Score=152.48 Aligned_cols=250 Identities=11% Similarity=0.072 Sum_probs=184.4
Q ss_pred CCcceEEEeeCCCCCEEEEEecC------------------------CeEEEEEccCCceeEEEe-ccCCCeEEEEEecC
Q psy14906 161 WNSCVNVLEPSPVVDIIGVGLSN------------------------KKIILHNILTDESLMEFI-QTWGPVTALSFRTD 215 (583)
Q Consensus 161 ~~~~i~~~~~s~~~~~l~~~~~d------------------------~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~ 215 (583)
.-+.+.+++++|+|+++++...+ +.|.+||..+++.+..+. .+......++++|+
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 35679999999999999888777 479999999898877665 34457899999999
Q ss_pred CCCEEEEEcCCCcEEEEeCCCCe-ehhhhh--------hccccceEEEEEec-CCCEEEEEe-CCCeEEEEEccCCCCCc
Q psy14906 216 GPPMMVSGSNTGHLTVWNLEDRQ-VENQIK--------KAHRKVVTGAHFLY-NEPLLVTSS-PDNTLKLWIFDKADGNG 284 (583)
Q Consensus 216 ~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~--------~~~~~~v~~~~~~~-~~~~l~s~~-~d~~i~~w~~~~~~~~~ 284 (583)
|+ ++++...++.|++||..... .+..+. .++-.....++++| ++.++++.+ .++.|++|+. .+
T Consensus 102 g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-----~g 175 (329)
T 3fvz_A 102 GN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-----SG 175 (329)
T ss_dssp SC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-----TS
T ss_pred CC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-----CC
Confidence 99 88888889999999986542 333331 13344688999999 788888876 6899999953 34
Q ss_pred eeeEEecc----------CCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcccc
Q psy14906 285 RLLRIREG----------HSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNE 354 (583)
Q Consensus 285 ~~~~~~~~----------~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (583)
..+..+.. +-..+..++++|..+.++++...++.|++||..+++....+....
T Consensus 176 ~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~----------------- 238 (329)
T 3fvz_A 176 KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS----------------- 238 (329)
T ss_dssp CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT-----------------
T ss_pred CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc-----------------
Confidence 45555432 223478999997337777777788999999998776554432110
Q ss_pred ccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc------CCcEEE
Q psy14906 355 KFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH------CGNFVL 428 (583)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~------~~~~l~ 428 (583)
....+..++++| +|+..+
T Consensus 239 --------------------------------------------------------~~~~~~~~~~~pg~~~~~~g~~~v 262 (329)
T 3fvz_A 239 --------------------------------------------------------FGRNVFAISYIPGFLFAVNGKPYF 262 (329)
T ss_dssp --------------------------------------------------------TTTCEEEEEEETTEEEEEECCCCT
T ss_pred --------------------------------------------------------cCCCcceeeecCCEEEEeCCCEEe
Confidence 003455667777 344333
Q ss_pred EEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 429 IGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 429 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
+...+..|++|+..+++.+..+... ..+...+.+++++|+|.++++...++.|++|++...
T Consensus 263 ~~~~~~~v~~~~~~~g~~~~~~~~~--~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 263 GDQEPVQGFVMNFSSGEIIDVFKPV--RKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp TCSCCCCEEEEETTTCCEEEEECCS--SSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred ccCCCcEEEEEEcCCCeEEEEEcCC--CCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 3444568999999999988876322 367778999999999988888889999999998764
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.80 E-value=8.6e-17 Score=147.89 Aligned_cols=301 Identities=10% Similarity=-0.003 Sum_probs=208.3
Q ss_pred ccCCCEEEEEeC-----CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe----------c
Q psy14906 118 LPFGPHLISVDE-----ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL----------S 182 (583)
Q Consensus 118 s~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----------~ 182 (583)
.|+++.++.... ++.|.+.|..+++.+.++. ....+ . ++++|||++|.++. .
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~-----------vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~ 107 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMID-----------GGFLP-N-PVVADDGSFIAHASTVFSRIARGER 107 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEE-----------ECSSC-E-EEECTTSSCEEEEEEEEEETTEEEE
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEE-----------CCCCC-c-EEECCCCCEEEEEcccccccccCCC
Confidence 799998888765 6799999999999999987 33344 4 99999999887775 3
Q ss_pred CCeEEEEEccCCceeEEEeccC-------CCeEEEEEecCCCCEEEEEc--CCCcEEEEeCCCCeehhhhhhccccceEE
Q psy14906 183 NKKIILHNILTDESLMEFIQTW-------GPVTALSFRTDGPPMMVSGS--NTGHLTVWNLEDRQVENQIKKAHRKVVTG 253 (583)
Q Consensus 183 d~~i~iw~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~~v~~ 253 (583)
++.|.+||..+++.+.++.-.. .....++|+|||+ +++++. .++.|.++|+.+++.+.++... + . .
T Consensus 108 ~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk-~lyVan~~~~~~VsVID~~t~~vv~tI~v~--g-~-~ 182 (386)
T 3sjl_D 108 TDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAFKRMLDVP--D-C-Y 182 (386)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEEECC--S-E-E
T ss_pred CCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCC-EEEEEEcCCCCeEEEEECCCCcEEEEEECC--C-c-c
Confidence 5789999999999998876331 2467899999999 555554 3689999999999998887221 1 1 2
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC----CCCCe-eEEEeeCCCCEEEEeeCCCcEEEEEccccc
Q psy14906 254 AHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH----SAPPN-YIQFYGNSSDNILSAAGDSTLRIFNTKSET 328 (583)
Q Consensus 254 ~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~----~~~v~-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 328 (583)
..+....+.+++.+.||.+.+.++... ++.......+ ..++. ...|.+.++++++ .+.+|.+.+.|+.+..
T Consensus 183 ~~~P~g~~~~~~~~~DG~~~~v~~~~~---g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 183 HIFPTAPDTFFMHCRDGSLAKVAFGTE---GTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGD 258 (386)
T ss_dssp EEEEEETTEEEEEETTSCEEEEECCSS---SCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSS
T ss_pred eeecCCCceeEEECCCCCEEEEECCCC---CeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCc
Confidence 234344566778888888888866432 1211111111 12221 2466544665544 5567999999987653
Q ss_pred c--ceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccc
Q psy14906 329 S--NKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPER 406 (583)
Q Consensus 329 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 406 (583)
. ...+....... .
T Consensus 259 ~~v~~~~~~~~~~~-----------------------------------------------------------------~ 273 (386)
T 3sjl_D 259 AKFLPAVEALTEAE-----------------------------------------------------------------R 273 (386)
T ss_dssp CEECCCEESSCHHH-----------------------------------------------------------------H
T ss_pred ceeecceecccccc-----------------------------------------------------------------c
Confidence 2 11110000000 0
Q ss_pred ccccCCCCceEEEEccCCcEEEEEec----------CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc-EEE
Q psy14906 407 CKQAKQSKPTCVYITHCGNFVLIGYS----------SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ-IVI 475 (583)
Q Consensus 407 ~~~~~~~~i~~~~~s~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~ 475 (583)
...........++++++++.+++... .+.|.++|+.+++.+..+. -...+..+++++|++ +|+
T Consensus 274 ~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~------vg~~~~~lavs~D~~~~ly 347 (386)
T 3sjl_D 274 ADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE------MGHEIDSINVSQDEKPLLY 347 (386)
T ss_dssp HTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE------EEEEECEEEECSSSSCEEE
T ss_pred cccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE------CCCCcceEEECCCCCeEEE
Confidence 00000023446777999988888653 3679999999999998873 234788999999997 666
Q ss_pred Ee-ecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccC
Q psy14906 476 SG-GNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQE 513 (583)
Q Consensus 476 s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~ 513 (583)
+. ..++.|.++|..++ +.+..+........|.+++|
T Consensus 348 ~tn~~~~~VsViD~~t~--k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 348 ALSTGDKTLYIHDAESG--EELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EEETTTTEEEEEETTTC--CEEEEECCCCSSCCEEEECC
T ss_pred EEcCCCCeEEEEECCCC--cEEEEecCCCCCceeEECCc
Confidence 54 45899999999999 99999999888888888887
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.80 E-value=4.9e-17 Score=148.25 Aligned_cols=244 Identities=14% Similarity=0.150 Sum_probs=175.7
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEec------cCCCeEEEEEe-cCCCCEEEEEcC-CCcEEE
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQ------TWGPVTALSFR-TDGPPMMVSGSN-TGHLTV 231 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~------~~~~v~~~~~~-~~~~~~l~s~~~-dg~i~v 231 (583)
++-..+.+++++++++++++...++.|.+||.. ++.+..+.. +...+..+++. +++. ++++... ++.|.+
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEECGGGCEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCe-EEEEcCCCCCEEEE
Confidence 445678999999999988888889999999987 666666642 33578999995 6676 6666543 789999
Q ss_pred EeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEec--cCCCCCeeEEEeeCCCCE
Q psy14906 232 WNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE--GHSAPPNYIQFYGNSSDN 309 (583)
Q Consensus 232 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~ 309 (583)
|| .+++.+..+...+...+.+++++++|+++++...++.|.+|+. .+..+..+. .+...+..++++| +++.
T Consensus 105 ~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-----~g~~~~~~~~~~~~~~p~~i~~~~-~g~l 177 (286)
T 1q7f_A 105 YN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-----NGNVLHKFGCSKHLEFPNGVVVND-KQEI 177 (286)
T ss_dssp EC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-----TSCEEEEEECTTTCSSEEEEEECS-SSEE
T ss_pred EC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-----CCCEEEEeCCCCccCCcEEEEECC-CCCE
Confidence 99 5566665553344567899999999998888777899999953 234444443 3445678999997 6877
Q ss_pred EEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEE
Q psy14906 310 ILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSL 389 (583)
Q Consensus 310 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 389 (583)
+++...++.|++||... +....+..
T Consensus 178 ~v~~~~~~~i~~~~~~g-~~~~~~~~------------------------------------------------------ 202 (286)
T 1q7f_A 178 FISDNRAHCVKVFNYEG-QYLRQIGG------------------------------------------------------ 202 (286)
T ss_dssp EEEEGGGTEEEEEETTC-CEEEEESC------------------------------------------------------
T ss_pred EEEECCCCEEEEEcCCC-CEEEEEcc------------------------------------------------------
Confidence 77777789999999743 22111100
Q ss_pred eecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCc-eEEEEEcccCccccccCCCCCCCcccCeeEEEEe
Q psy14906 390 WSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG-HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSD 468 (583)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s 468 (583)
. .....+..++++++|+++++...++ .|.+|+. +++.+..+.. ......+.+++++
T Consensus 203 ---~----------------g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~---~~~~~~~~~i~~~ 259 (286)
T 1q7f_A 203 ---E----------------GITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALES---KVKHAQCFDVALM 259 (286)
T ss_dssp ---T----------------TTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEE---SSCCSCEEEEEEE
T ss_pred ---C----------------CccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcc---cCCCCcceeEEEC
Confidence 0 0003577899999999888887776 9999995 4555555521 1223357899999
Q ss_pred CCCcEEEEeecCCcEEEEEccCC
Q psy14906 469 NLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 469 ~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
|+++++++ +.|+.|++|++...
T Consensus 260 ~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 260 DDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp TTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCCcEEEE-CCCCeEEEEEcccc
Confidence 99987777 57899999998654
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.79 E-value=5.4e-17 Score=151.64 Aligned_cols=275 Identities=12% Similarity=0.116 Sum_probs=187.4
Q ss_pred CcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehh
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVEN 241 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 241 (583)
...|.+++|++++..++....++.++.| .++....+..+...+.+++|+|+++ +++++..++.|.+||..+++...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~~~~ 80 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKR 80 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEE
T ss_pred ccccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCC-EEEEECCCCEEEEEeCCCCcEEE
Confidence 4557889999998888877788889999 4566677777767889999999998 88888889999999998876554
Q ss_pred hhhhccccceEEEEEecCCCEEEEEeCC----CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC--
Q psy14906 242 QIKKAHRKVVTGAHFLYNEPLLVTSSPD----NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-- 315 (583)
Q Consensus 242 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d----~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-- 315 (583)
.. ..+...+.+++++++++++++...+ +.|.+|+.+ ......+.....+...+..++++| +++.+++...
T Consensus 81 ~~-~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~--~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~ 156 (333)
T 2dg1_A 81 PF-VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN--GDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGY 156 (333)
T ss_dssp EE-ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT--SCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCB
T ss_pred Ee-eCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC--CCEEEEEEccCccCCcccceEECC-CCCEEEEecccc
Confidence 33 3456789999999999988877666 678888543 222221111112345688999997 6776666543
Q ss_pred ----CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEee
Q psy14906 316 ----DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWS 391 (583)
Q Consensus 316 ----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 391 (583)
.+.|..+|..+++..... .
T Consensus 157 ~~~~~~~l~~~~~~~~~~~~~~---------------------------------------------------------~ 179 (333)
T 2dg1_A 157 STNPLGGVYYVSPDFRTVTPII---------------------------------------------------------Q 179 (333)
T ss_dssp TTBCCEEEEEECTTSCCEEEEE---------------------------------------------------------E
T ss_pred ccCCCceEEEEeCCCCEEEEee---------------------------------------------------------c
Confidence 234544544332211000 0
Q ss_pred cCcccccceeeecccccccCCCCceEEEEccCCcEEEEE-ecCceEEEEEccc-CccccccC---CCCCCCcccCeeEEE
Q psy14906 392 FYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIG-YSSGHVDRFNIQS-GAHRGSYG---HDNQPGHVGGVRGVV 466 (583)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~i~d~~~-~~~~~~~~---~~~~~~h~~~v~~~~ 466 (583)
....+..++++|+++.++++ ..++.|.+|+..+ +.....+. .....++ ..+..++
T Consensus 180 -------------------~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~ 239 (333)
T 2dg1_A 180 -------------------NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCC 239 (333)
T ss_dssp -------------------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEE
T ss_pred -------------------CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceE
Confidence 00346789999999866554 5678999999864 33221110 0000122 4678899
Q ss_pred EeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccC-------CeeeEEeccCCcEEEEEeCCc
Q psy14906 467 SDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN-------GISFFRTHQESSMLAVCLDDF 524 (583)
Q Consensus 467 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-------~v~~~~~s~~~~~l~~~~~dg 524 (583)
++++|+++++...++.|.+||.. + +.+..+.... .+.+++|+||++.|++++.++
T Consensus 240 ~d~~G~l~v~~~~~~~v~~~d~~-g--~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 240 IDSDDNLYVAMYGQGRVLVFNKR-G--YPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EBTTCCEEEEEETTTEEEEECTT-S--CEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred ECCCCCEEEEEcCCCEEEEECCC-C--CEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 99999988888778999999984 4 5555555442 588999999988777666653
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=99.78 E-value=6.5e-17 Score=151.09 Aligned_cols=270 Identities=11% Similarity=0.083 Sum_probs=185.4
Q ss_pred CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCc
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNG 284 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~ 284 (583)
..|.++.|++++. .++..+.++.++.| .++....+ ..+...+.+++|++++++++++..++.|.+|+.+ . +
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~--~--~ 76 (333)
T 2dg1_A 6 QDLPTLFYSGKSN-SAVPIISESELQTI---TAEPWLEI-SKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPE--T--K 76 (333)
T ss_dssp CCCCBCCSCGGGG-CSSCCCCGGGSCEE---ECEEEEEE-ESSCCCEEEEEECTTSCEEEEETTTCEEEEECTT--T--C
T ss_pred cccceeeecCCcc-ceeEEeecccCccc---ccceeEEE-eccCccccCcEECCCCCEEEEECCCCEEEEEeCC--C--C
Confidence 5678889999887 56666778889999 34455555 4566677999999999988888888999999543 2 2
Q ss_pred eeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC----CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCc
Q psy14906 285 RLLRIREGHSAPPNYIQFYGNSSDNILSAAGD----STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPP 360 (583)
Q Consensus 285 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (583)
+.......+...+.+++++| +++++++...+ +.|.+||..++.....+..
T Consensus 77 ~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~------------------------- 130 (333)
T 2dg1_A 77 EIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIED------------------------- 130 (333)
T ss_dssp CEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECS-------------------------
T ss_pred cEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEcc-------------------------
Confidence 32222324556789999997 78777776665 6888998776543211100
Q ss_pred cceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec------Cc
Q psy14906 361 VSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS------SG 434 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~------dg 434 (583)
......+..++++|+|+++++... .+
T Consensus 131 ------------------------------------------------~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 162 (333)
T 2dg1_A 131 ------------------------------------------------LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG 162 (333)
T ss_dssp ------------------------------------------------SSSCCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred ------------------------------------------------CccCCcccceEECCCCCEEEEeccccccCCCc
Confidence 000145788999999987776653 36
Q ss_pred eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEE-EEeecCCcEEEEEccCCCCCceEEe------e--ccCCe
Q psy14906 435 HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIV-ISGGNDQTVKVWHFKQTGKPPLRSI------K--LDNGI 505 (583)
Q Consensus 435 ~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~------~--~~~~v 505 (583)
.|..++..+++..... .+...+..++|+|+++.| ++...++.|.+|++.... ..+..+ . ....+
T Consensus 163 ~l~~~~~~~~~~~~~~------~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g-~~~~~~~~~~~~~~~~~~~~ 235 (333)
T 2dg1_A 163 GVYYVSPDFRTVTPII------QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDG-VTIQPFGATIPYYFTGHEGP 235 (333)
T ss_dssp EEEEECTTSCCEEEEE------EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS-SSEEEEEEEEEEECCSSSEE
T ss_pred eEEEEeCCCCEEEEee------cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCC-cCcccccceEEEecCCCCCC
Confidence 6777776655443222 234457899999999855 455567899999996421 222211 1 12367
Q ss_pred eeEEeccCCcEEEEEeCCceEEEEEccccceEEeeccccc------ceeeEEecCCCcEEEEEeCC
Q psy14906 506 SFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMG------QLTDADFSPDSRWLITASMD 565 (583)
Q Consensus 506 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~------~v~~l~~s~d~~~l~s~~~d 565 (583)
..++++++|+++++...++.|.+||. +++.+..+..+.. .+.+++|+||++.|+.++.+
T Consensus 236 ~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 236 DSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 88999999998888888899999998 4666666654433 68999999998777655554
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.2e-16 Score=146.43 Aligned_cols=286 Identities=9% Similarity=-0.015 Sum_probs=195.2
Q ss_pred CCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeE
Q psy14906 129 EESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVT 208 (583)
Q Consensus 129 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~ 208 (583)
.++.|.++|.++++....+...... .........+++. ++++.++...++.|.+||..+++.+.++... ....
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~-----~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~-~~p~ 87 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANG-----FKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGF-TSPR 87 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHS-----SCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECC-SSEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcC-----cccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCC-CCCc
Confidence 3789999999999876554210000 0122445677774 4555666667799999999999999988644 6789
Q ss_pred EEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhcc----ccceEEEEEecCCCEEEEEe-CCCeEEEEEccCCCCC
Q psy14906 209 ALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAH----RKVVTGAHFLYNEPLLVTSS-PDNTLKLWIFDKADGN 283 (583)
Q Consensus 209 ~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~~ 283 (583)
.++++++++ ++++...++.|.+||..+++....+..+. ......+++ .++.++++.. .++.|.++|.. .
T Consensus 88 ~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~----t 161 (328)
T 3dsm_A 88 YIHFLSDEK-AYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTE----T 161 (328)
T ss_dssp EEEEEETTE-EEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETT----T
T ss_pred EEEEeCCCe-EEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECC----C
Confidence 999999985 66666578999999999998776652222 114556777 4444444433 48899999664 3
Q ss_pred ceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC----------CcEEEEEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 284 GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD----------STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 284 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
.+.+..+... .....+.++| ++++++++..+ +.|.++|..+++....+...
T Consensus 162 ~~~~~~i~~g-~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~----------------- 222 (328)
T 3dsm_A 162 DKVVDELTIG-IQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFK----------------- 222 (328)
T ss_dssp TEEEEEEECS-SCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECC-----------------
T ss_pred CeEEEEEEcC-CCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecC-----------------
Confidence 4555555432 3457888886 77766666554 68888888776543322100
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 433 (583)
. ...+..++++|++++++++..
T Consensus 223 ----------------------------------------~-----------------g~~p~~la~~~d~~~lyv~~~- 244 (328)
T 3dsm_A 223 ----------------------------------------L-----------------GDWPSEVQLNGTRDTLYWINN- 244 (328)
T ss_dssp ----------------------------------------T-----------------TCCCEEEEECTTSCEEEEESS-
T ss_pred ----------------------------------------C-----------------CCCceeEEEecCCCEEEEEcc-
Confidence 0 035789999999999988765
Q ss_pred ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC-CCcEEEEe----ecCCcEEEEEccCCCCCceEEeeccCCeeeE
Q psy14906 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN-LNQIVISG----GNDQTVKVWHFKQTGKPPLRSIKLDNGISFF 508 (583)
Q Consensus 434 g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~----~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~ 508 (583)
.|.+||..+++....... ..+......++++| ++.++++. ..++.|.+||.. + +.+..+........+
T Consensus 245 -~v~~~d~~t~~~~~~~~~---~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g--~~~~~i~~G~~P~~~ 317 (328)
T 3dsm_A 245 -DIWRMPVEADRVPVRPFL---EFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-G--KLIDEFYVGIIPGAF 317 (328)
T ss_dssp -SEEEEETTCSSCCSSCSB---CCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-C--CEEEEEEEEESEEEE
T ss_pred -EEEEEECCCCceeeeeee---cCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-C--CEEEEEEeccCcceE
Confidence 899999988876422100 22246789999999 55666665 568899999998 6 788887766666666
Q ss_pred Eec
Q psy14906 509 RTH 511 (583)
Q Consensus 509 ~~s 511 (583)
+|-
T Consensus 318 ~~~ 320 (328)
T 3dsm_A 318 CWK 320 (328)
T ss_dssp EEE
T ss_pred EEe
Confidence 663
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-16 Score=146.60 Aligned_cols=267 Identities=10% Similarity=0.096 Sum_probs=185.8
Q ss_pred CCCcEEEEeCCCCeehhhhhhc-----cccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCee
Q psy14906 225 NTGHLTVWNLEDRQVENQIKKA-----HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNY 299 (583)
Q Consensus 225 ~dg~i~vwd~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~ 299 (583)
.++.|.+||.++++....+... .......+.+. +++++++...++.|.+||.. ..+.+..+.. ...+..
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~----t~~~~~~i~~-~~~p~~ 88 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDIN----TFKEVGRITG-FTSPRY 88 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETT----TCCEEEEEEC-CSSEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECc----ccEEEEEcCC-CCCCcE
Confidence 3789999999999876655221 22346777774 45566666667999999654 4555565543 456789
Q ss_pred EEEeeCCCCEEEEee-CCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEE
Q psy14906 300 IQFYGNSSDNILSAA-GDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIA 378 (583)
Q Consensus 300 ~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (583)
+++++ ++ .++.+. .++.|.+||..+++....+.....
T Consensus 89 i~~~~-~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~---------------------------------------- 126 (328)
T 3dsm_A 89 IHFLS-DE-KAYVTQIWDYRIFIINPKTYEITGYIECPDM---------------------------------------- 126 (328)
T ss_dssp EEEEE-TT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTC----------------------------------------
T ss_pred EEEeC-CC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCc----------------------------------------
Confidence 99987 56 455554 789999999988765443311100
Q ss_pred EEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe--cCceEEEEEcccCccccccCCCCCC
Q psy14906 379 AIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY--SSGHVDRFNIQSGAHRGSYGHDNQP 456 (583)
Q Consensus 379 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~ 456 (583)
......+..+++ ++..++++. .++.|.++|..+++....+..
T Consensus 127 ------------------------------~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~---- 170 (328)
T 3dsm_A 127 ------------------------------DMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI---- 170 (328)
T ss_dssp ------------------------------CTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC----
T ss_pred ------------------------------cccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc----
Confidence 000013445666 344444444 488999999999988776631
Q ss_pred CcccCeeEEEEeCCCcEEEEeecC----------CcEEEEEccCCCCCceEEeecc--CCeeeEEeccCCcEEEEEeCCc
Q psy14906 457 GHVGGVRGVVSDNLNQIVISGGND----------QTVKVWHFKQTGKPPLRSIKLD--NGISFFRTHQESSMLAVCLDDF 524 (583)
Q Consensus 457 ~h~~~v~~~~~s~~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~dg 524 (583)
......++++|+|++++++..+ +.|.++|..+. +....+... ..+..++++|+++.|+++..
T Consensus 171 --g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~--~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-- 244 (328)
T 3dsm_A 171 --GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF--TVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-- 244 (328)
T ss_dssp --SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT--EEEEEEECCTTCCCEEEEECTTSCEEEEESS--
T ss_pred --CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC--eEEEEEecCCCCCceeEEEecCCCEEEEEcc--
Confidence 2345788999999988777654 78999999887 666666543 46899999999999888765
Q ss_pred eEEEEEccccceEEe--ecccccceeeEEecC-CCcEEEEE----eCCCeEEEEeCCCccccccc
Q psy14906 525 TVNIIDIDTCTIIRK--LSGHMGQLTDADFSP-DSRWLITA----SMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 525 ~i~i~d~~~~~~~~~--~~~h~~~v~~l~~s~-d~~~l~s~----~~d~~i~vw~~~~~~~~~~~ 582 (583)
.|.+||..+++.... +..+......++++| ++...++. ..++.|.+||.+ |+++.++
T Consensus 245 ~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 245 DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 899999998876421 222245688999999 55555665 578999999998 9988765
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=99.77 E-value=6.1e-16 Score=142.25 Aligned_cols=304 Identities=12% Similarity=0.088 Sum_probs=207.7
Q ss_pred EEeeCCCCCEEEEEec-----CCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEc---------CCCcEEEE
Q psy14906 167 VLEPSPVVDIIGVGLS-----NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS---------NTGHLTVW 232 (583)
Q Consensus 167 ~~~~s~~~~~l~~~~~-----d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---------~dg~i~vw 232 (583)
.....|+++.+.+... ++.|.++|..+++.+.++.....+ . ++++|||++++++.. .++.|.+|
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 3566799998888765 579999999999999998865455 4 999999995444432 35789999
Q ss_pred eCCCCeehhhhhhcc------ccceEEEEEecCCCEEEEEeC--CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEee
Q psy14906 233 NLEDRQVENQIKKAH------RKVVTGAHFLYNEPLLVTSSP--DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304 (583)
Q Consensus 233 d~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~~~--d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 304 (583)
|..+++.+..+..+. ......++|+|||++++.+.. ++.|.++|+. ..+.+.++.... +....|
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~----t~~vv~tI~v~g----~~~~~P 186 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE----GKAFKRMLDVPD----CYHIFP 186 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT----TTEEEEEEECCS----EEEEEE
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECC----CCcEEEEEECCC----cceeec
Confidence 999998887763221 124557899999999888864 6899999765 456666664211 223345
Q ss_pred CCCCEEEEeeCCCcEEEEEccc-cccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecC
Q psy14906 305 NSSDNILSAAGDSTLRIFNTKS-ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTG 383 (583)
Q Consensus 305 ~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (583)
...+.+++.+.||.+.+.++.+ ++......
T Consensus 187 ~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~------------------------------------------------- 217 (386)
T 3sjl_D 187 TAPDTFFMHCRDGSLAKVAFGTEGTPEITHT------------------------------------------------- 217 (386)
T ss_dssp EETTEEEEEETTSCEEEEECCSSSCCEEEEC-------------------------------------------------
T ss_pred CCCceeEEECCCCCEEEEECCCCCeEEEeec-------------------------------------------------
Confidence 4567888889999999999876 33211000
Q ss_pred CceEEEeecCcccccceeeecccccccCCCCc-eEEEE-ccCCcEEEEEecCceEEEEEcccCcc--ccccCCCC-----
Q psy14906 384 KNKVSLWSFYKSKMDDMFLVPERCKQAKQSKP-TCVYI-THCGNFVLIGYSSGHVDRFNIQSGAH--RGSYGHDN----- 454 (583)
Q Consensus 384 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~-s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~----- 454 (583)
..++... ..+ ....| .++|++++ .+.+|.|+++|+.++.. ...+....
T Consensus 218 ----~~~~~~~------------------~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~ 274 (386)
T 3sjl_D 218 ----EVFHPED------------------EFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERA 274 (386)
T ss_dssp ----CCCSCTT------------------SCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHH
T ss_pred ----ceecccc------------------ccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceecccccccc
Confidence 0000000 011 11244 36776655 44579999999876542 22221000
Q ss_pred CCCcccCeeEEEEeCCCcEEEEeec----------CCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCc-EEEEEe-C
Q psy14906 455 QPGHVGGVRGVVSDNLNQIVISGGN----------DQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS-MLAVCL-D 522 (583)
Q Consensus 455 ~~~h~~~v~~~~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~ 522 (583)
..-.......++++++++.++.... ...|.+.|+.+. +.+..+.....+..+++++|++ +|++.. .
T Consensus 275 ~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~--kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~ 352 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG--ERLAKFEMGHEIDSINVSQDEKPLLYALSTG 352 (386)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC--CEEEEEEEEEEECEEEECSSSSCEEEEEETT
T ss_pred ccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCC--eEEEEEECCCCcceEEECCCCCeEEEEEcCC
Confidence 0012234456788999887776542 246999999998 9999998888999999999997 666654 4
Q ss_pred CceEEEEEccccceEEeecccccceeeEEecCC
Q psy14906 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPD 555 (583)
Q Consensus 523 dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d 555 (583)
++.|.++|..+++.+.++.. .+.-+.|.+++|
T Consensus 353 ~~~VsViD~~t~k~~~~i~~-~~~p~~l~~s~d 384 (386)
T 3sjl_D 353 DKTLYIHDAESGEELRSVNQ-LGHGPQVITTAD 384 (386)
T ss_dssp TTEEEEEETTTCCEEEEECC-CCSSCCEEEECC
T ss_pred CCeEEEEECCCCcEEEEecC-CCCCceeEECCc
Confidence 89999999999999988874 344566677766
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.1e-16 Score=160.33 Aligned_cols=281 Identities=11% Similarity=0.090 Sum_probs=181.6
Q ss_pred cCCCCEEEEEcCCC----cEEEEeCCCCeeh-----hhhhhccccceEEEEEecCCCEEEEEeCCC-----eEEEEEccC
Q psy14906 214 TDGPPMMVSGSNTG----HLTVWNLEDRQVE-----NQIKKAHRKVVTGAHFLYNEPLLVTSSPDN-----TLKLWIFDK 279 (583)
Q Consensus 214 ~~~~~~l~s~~~dg----~i~vwd~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~i~~w~~~~ 279 (583)
|+|++++++-...+ .+.+.+...++.. ..+..+|...+..++|||||++|+.+..++ .|++||++
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~- 159 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD- 159 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT-
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC-
Confidence 88884444443322 3444454444321 123234555788999999999998776543 89999765
Q ss_pred CCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCc----------------EEEEEccccccceeeccchhhhhhh
Q psy14906 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDST----------------LRIFNTKSETSNKNLGIASANRNNL 343 (583)
Q Consensus 280 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~----------------i~iwd~~~~~~~~~~~~~~~~~~~~ 343 (583)
.++.......+ ..+..++|+| |++.|+.++.++. |++|++.++...
T Consensus 160 ---tg~~~~~~~~~-~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~------------- 221 (710)
T 2xdw_A 160 ---GAKELPDVLER-VKFSCMAWTH-DGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSE------------- 221 (710)
T ss_dssp ---TTEEEEEEEEE-ECSCCEEECT-TSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGG-------------
T ss_pred ---CCCCCcccccC-cccceEEEEe-CCCEEEEEEECCccccccccccccCCCCEEEEEECCCCccc-------------
Confidence 23333322112 2367899997 8999998887654 555555443211
Q ss_pred hhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC
Q psy14906 344 KRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC 423 (583)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 423 (583)
....... ..+......+.|+||
T Consensus 222 -------------------------------------------------------~~~v~~~---~~~~~~~~~~~~SpD 243 (710)
T 2xdw_A 222 -------------------------------------------------------DILCAEF---PDEPKWMGGAELSDD 243 (710)
T ss_dssp -------------------------------------------------------CEEEECC---TTCTTCEEEEEECTT
T ss_pred -------------------------------------------------------ceEEecc---CCCCeEEEEEEEcCC
Confidence 0000000 001134678899999
Q ss_pred CcEEEEEec-----CceEEEEEccc------Cc-cccccCCCCCCCcccCeeEEEEeCCCcEEEEeecC----CcEEEEE
Q psy14906 424 GNFVLIGYS-----SGHVDRFNIQS------GA-HRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGND----QTVKVWH 487 (583)
Q Consensus 424 ~~~l~~~~~-----dg~i~i~d~~~------~~-~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d----g~i~iwd 487 (583)
|++|+.... +..|++||+.+ +. ....+ ..+...+.. .|+|+|+.|+..+.+ +.|.+||
T Consensus 244 g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l-----~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d 317 (710)
T 2xdw_A 244 GRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKL-----IDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINID 317 (710)
T ss_dssp SCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEE-----ECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred CCEEEEEEEccCCCccEEEEEECcccccccCCccceEEe-----eCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEe
Confidence 999988765 56899999987 43 23334 344444544 488888877766543 3699999
Q ss_pred ccCCCCCc-eEEeeccC--CeeeEEeccCCcEEEEEeCCc--eEEEEEccccceEEeecccccceeeEEecCCCcEEEEE
Q psy14906 488 FKQTGKPP-LRSIKLDN--GISFFRTHQESSMLAVCLDDF--TVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITA 562 (583)
Q Consensus 488 ~~~~~~~~-~~~~~~~~--~v~~~~~s~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~ 562 (583)
+.+..... ...+.+.. .+..+.|++++.++++...++ .|++||+.+++.+..+..+...+..++++|+++.|+..
T Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~ 397 (710)
T 2xdw_A 318 FTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQ 397 (710)
T ss_dssp TTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEE
T ss_pred CCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEE
Confidence 98762112 23333333 577889998888888888887 46667776788778888888889999999999776633
Q ss_pred -e---CCCeEEEEeCCCcc
Q psy14906 563 -S---MDCTIRVWDIPSSQ 577 (583)
Q Consensus 563 -~---~d~~i~vw~~~~~~ 577 (583)
+ ..++|++||+.+++
T Consensus 398 ~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 398 FTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EECSSCCCEEEEEETTSSS
T ss_pred EeCCCCCCEEEEEECCCCc
Confidence 2 34789999999887
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=8.8e-16 Score=158.58 Aligned_cols=285 Identities=14% Similarity=0.072 Sum_probs=184.7
Q ss_pred ccCCCEEEEEeCC-C----cEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCC-----eEE
Q psy14906 118 LPFGPHLISVDEE-S----NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNK-----KII 187 (583)
Q Consensus 118 s~~~~~l~s~~~d-g----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~-----~i~ 187 (583)
+|+|++++....+ + .|.+.+..+++....+... ... .++...+..++|||||++||.+..++ .|+
T Consensus 80 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~--~l~---~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~ 154 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPN--ILS---DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIK 154 (710)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGG--GGC---TTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEE
T ss_pred EEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHH--Hhc---cCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEE
Confidence 6899988865433 2 3344444444432222111 000 13445788999999999999876654 899
Q ss_pred EEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCc----------------EEEEeCCCCeeh----hhhhhcc
Q psy14906 188 LHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGH----------------LTVWNLEDRQVE----NQIKKAH 247 (583)
Q Consensus 188 iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~----------------i~vwd~~~~~~~----~~~~~~~ 247 (583)
+||+.+++.+.....+ ..+..++|+|||+ .|+.++.++. |++|++.+++.. ... ..|
T Consensus 155 v~d~~tg~~~~~~~~~-~~~~~~~wspDg~-~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~-~~~ 231 (710)
T 2xdw_A 155 FMKVDGAKELPDVLER-VKFSCMAWTHDGK-GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF-PDE 231 (710)
T ss_dssp EEETTTTEEEEEEEEE-ECSCCEEECTTSS-EEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC-TTC
T ss_pred EEECCCCCCCcccccC-cccceEEEEeCCC-EEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEecc-CCC
Confidence 9999999877643333 3477899999999 6666666655 999999876532 222 234
Q ss_pred ccceEEEEEecCCCEEEEEeC-----CCeEEEEEccCCC----CCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC--
Q psy14906 248 RKVVTGAHFLYNEPLLVTSSP-----DNTLKLWIFDKAD----GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD-- 316 (583)
Q Consensus 248 ~~~v~~~~~~~~~~~l~s~~~-----d~~i~~w~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-- 316 (583)
...+..+.|+|||++|+..+. +..+.+|+++... +.. ....+..+...+.. .|+| +++.|+..+..
T Consensus 232 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~l~~~~~~~~~-~~s~-dg~~l~~~s~~~~ 308 (710)
T 2xdw_A 232 PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL-KWVKLIDNFEGEYD-YVTN-EGTVFTFKTNRHS 308 (710)
T ss_dssp TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-CCEEEECSSSSCEE-EEEE-ETTEEEEEECTTC
T ss_pred CeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc-ceEEeeCCCCcEEE-EEec-cCCEEEEEECCCC
Confidence 556789999999999887764 5688888775310 111 23445555555554 4776 67777666543
Q ss_pred --CcEEEEEcccccc--ceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeec
Q psy14906 317 --STLRIFNTKSETS--NKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSF 392 (583)
Q Consensus 317 --g~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 392 (583)
+.|.+||+.++.. .+.+.
T Consensus 309 ~~~~l~~~d~~~~~~~~~~~l~---------------------------------------------------------- 330 (710)
T 2xdw_A 309 PNYRLINIDFTDPEESKWKVLV---------------------------------------------------------- 330 (710)
T ss_dssp TTCEEEEEETTSCCGGGCEEEE----------------------------------------------------------
T ss_pred CCCEEEEEeCCCCCcccceecc----------------------------------------------------------
Confidence 3588888766431 11110
Q ss_pred CcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCce--EEEEEcccCccccccCCCCCCCcccCeeEEEEeCC
Q psy14906 393 YKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGH--VDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNL 470 (583)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 470 (583)
+. .....+..+++++++.++++...++. |++|++.+++....+ ..+.+.+..+.++|+
T Consensus 331 -----------~~----~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l-----~~~~~~v~~~~~s~d 390 (710)
T 2xdw_A 331 -----------PE----HEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIF-----PLEVGSVVGYSGQKK 390 (710)
T ss_dssp -----------CC----CSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEE-----CCCSSEEEEEECCTT
T ss_pred -----------CC----CCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEec-----CCCCceEEEEecCCC
Confidence 00 00023667888888888888888874 666777677766666 456778899999999
Q ss_pred CcEEEEe-e---cCCcEEEEEccCC
Q psy14906 471 NQIVISG-G---NDQTVKVWHFKQT 491 (583)
Q Consensus 471 ~~~l~s~-~---~dg~i~iwd~~~~ 491 (583)
++.++.. + ..++++.||+.++
T Consensus 391 ~~~l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 391 DTEIFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp CSEEEEEEECSSCCCEEEEEETTSS
T ss_pred CCEEEEEEeCCCCCCEEEEEECCCC
Confidence 8766533 2 4578999999887
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.2e-16 Score=148.48 Aligned_cols=288 Identities=9% Similarity=0.038 Sum_probs=169.2
Q ss_pred CCeEEEEEecCCCCEEEEE--------cCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC---CeEE
Q psy14906 205 GPVTALSFRTDGPPMMVSG--------SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD---NTLK 273 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~--------~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~i~ 273 (583)
..+...++ ||++++++. ..++.|.+||+.+++... + ..+..++|+|||++|+..+.+ +...
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~ 86 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I-----ENATMPRISPDGKKIAFMRANEEKKVSE 86 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E-----ESCEEEEECTTSSEEEEEEEETTTTEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c-----ccCCCeEECCCCCEEEEEEeccCCCcce
Confidence 45666777 777333332 125679999998876432 2 567889999999999887654 4545
Q ss_pred EEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 274 LWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 274 ~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
||.++... ++....... .. +..+.|+| |++.|+.++.+. ........+
T Consensus 87 l~~~~~~~--g~~~~l~~~-~~-~~~~~wsp-dg~~l~~~~~~~-------~~~~~~~~~-------------------- 134 (347)
T 2gop_A 87 IWVADLET--LSSKKILEA-KN-IRSLEWNE-DSRKLLIVGFKR-------REDEDFIFE-------------------- 134 (347)
T ss_dssp EEEEETTT--TEEEEEEEE-SE-EEEEEECT-TSSEEEEEEECC-------CC---------------------------
T ss_pred EEEEECCC--CceEEEEcC-CC-ccceeECC-CCCEEEEEEccC-------CCcCCcEEE--------------------
Confidence 55445443 233322222 23 88999997 788888876431 000000000
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccc-cceeeecccccccCCCCceEEEEccCCcEEEEEec
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKM-DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS 432 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 432 (583)
....... . ... ........+.+|++..... .... . . .+..++|+||| +++++..
T Consensus 135 ~~~~~~~------~------g~~--~~~~~~~~l~~~d~~~~~~~~~l~-------~--~-~~~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 135 DDVPAWF------D------DLG--FFDGEKTTFWIFDTESEEVIEEFE-------K--P-RFSSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp --CCCC-----------------------CEEEEEEEETTTTEEEEEEE-------E--E-TTCEEEEETTE-EEEEEEC
T ss_pred cccceee------c------Ccc--cccCccceEEEEECCCCeEEeeec-------C--C-CcccccCCCCe-EEEEEec
Confidence 0000000 0 000 0001123566677655432 1111 0 1 47789999999 7777654
Q ss_pred Cc-------eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecC--------CcEEEEEccCCCCCceE
Q psy14906 433 SG-------HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGND--------QTVKVWHFKQTGKPPLR 497 (583)
Q Consensus 433 dg-------~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~ 497 (583)
++ ...+|.+.+++. ..+ ..+ ..+..+ +|||+.|+.++.+ ..|.+|| ++ +...
T Consensus 190 ~~~~~~~~~~~~l~~~d~~~~-~~l-----~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~--~~~~ 256 (347)
T 2gop_A 190 REIIPQYFKFWDIYIWEDGKE-EKM-----FEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK--EVMG 256 (347)
T ss_dssp CCSSCCSSCCEEEEEEETTEE-EEE-----EEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS--CEEE
T ss_pred ccccccccccccEEEeCCCce-EEe-----ccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC--ceEe
Confidence 32 334444434443 333 234 455544 9999988877744 3677777 43 4333
Q ss_pred Eeec-cCCeee-EEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeE-EEEeCC
Q psy14906 498 SIKL-DNGISF-FRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI-RVWDIP 574 (583)
Q Consensus 498 ~~~~-~~~v~~-~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i-~vw~~~ 574 (583)
.... ...+.. +.|+ |+ ++++++.++.++|| +.+++... +..+...|.+++|+| .++++++.++.. .+|.++
T Consensus 257 l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~-~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 257 ILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKP-IAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp SSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEE-EECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred ccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEE-EecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 3333 346775 8999 88 99999999999999 88666544 344577899999999 677777777654 777765
Q ss_pred Ccc
Q psy14906 575 SSQ 577 (583)
Q Consensus 575 ~~~ 577 (583)
|+
T Consensus 331 -g~ 332 (347)
T 2gop_A 331 -GE 332 (347)
T ss_dssp -SS
T ss_pred -Cc
Confidence 54
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=5.3e-15 Score=135.83 Aligned_cols=282 Identities=9% Similarity=0.017 Sum_probs=194.0
Q ss_pred ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCC
Q psy14906 202 QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKAD 281 (583)
Q Consensus 202 ~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~ 281 (583)
.+...+.++++.++|. ++++...++.|.+||.. ++........+...+.++++.+++.++++...++.|..|+.+
T Consensus 12 ~~~~~~~~i~~d~~g~-l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--- 86 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGK-VWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK--- 86 (299)
T ss_dssp SSSCCEEEEEECTTSC-EEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT---
T ss_pred CcCCCccceEECCCCC-EEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC---
Confidence 3446899999999998 77766667899999988 543322112245678999999999988877768888888543
Q ss_pred CCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCcc
Q psy14906 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPV 361 (583)
Q Consensus 282 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (583)
+... ...+......+..+++.+ ++..+++...++.|..||. ++......
T Consensus 87 g~~~-~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~---------------------------- 135 (299)
T 2z2n_A 87 GIIK-EYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYE---------------------------- 135 (299)
T ss_dssp SCEE-EEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEE----------------------------
T ss_pred CcEE-EEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEec----------------------------
Confidence 1211 122223445678899986 6777777667788999987 43221100
Q ss_pred ceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEc
Q psy14906 362 SQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNI 441 (583)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~ 441 (583)
.. .....+..++++++|++.++...++.|..||.
T Consensus 136 ------------------------------~~----------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 136 ------------------------------LP----------------NKGSYPSFITLGSDNALWFTENQNNAIGRITE 169 (299)
T ss_dssp ------------------------------CS----------------STTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred ------------------------------CC----------------CCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence 00 00145788999999988887777889999998
Q ss_pred ccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeec---cCCeeeEEeccCCcEEE
Q psy14906 442 QSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL---DNGISFFRTHQESSMLA 518 (583)
Q Consensus 442 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~ 518 (583)
+++..... . ..+...+.+++++++++++++...++.|.+||. ++ ... .+.. ...+..++++++|++++
T Consensus 170 -~g~~~~~~-~---~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g--~~~-~~~~~~~~~~~~~i~~~~~g~l~v 240 (299)
T 2z2n_A 170 -SGDITEFK-I---PTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SG--EIT-EFKIPTPNARPHAITAGAGIDLWF 240 (299)
T ss_dssp -TCCEEEEE-C---SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC--CEE-EEECSSTTCCEEEEEECSTTCEEE
T ss_pred -CCcEEEee-C---CCCCCcceeEEECCCCCEEEEccCCceEEEECC-CC--cEE-EEECCCCCCCceeEEECCCCCEEE
Confidence 66554321 1 234556889999999997777767889999998 54 332 2322 25788999999999777
Q ss_pred EEeCCceEEEEEccccceEE-eecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCcc
Q psy14906 519 VCLDDFTVNIIDIDTCTIIR-KLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 519 ~~~~dg~i~i~d~~~~~~~~-~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~ 577 (583)
+...++.|..||. +++... .+..+...+.++++ +++++.++.. .+.+..++.++++
T Consensus 241 ~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 241 TEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp EETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred eccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 6667889999998 454322 23445567899999 8888777655 5677788877654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.76 E-value=1e-16 Score=165.01 Aligned_cols=279 Identities=8% Similarity=-0.012 Sum_probs=178.4
Q ss_pred eCCCCCEEEEEecCC-----eEEEEEccCCceeEEEe------ccCCCeEEEEEecCCCCEEE-E----EcCCCcEEEEe
Q psy14906 170 PSPVVDIIGVGLSNK-----KIILHNILTDESLMEFI------QTWGPVTALSFRTDGPPMMV-S----GSNTGHLTVWN 233 (583)
Q Consensus 170 ~s~~~~~l~~~~~d~-----~i~iw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~-s----~~~dg~i~vwd 233 (583)
.+|+|++++....++ .|.+.+...++....+. +|...+..++|||||+ +|+ + |+.+..|++||
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~-~la~~~~~~G~~~~~i~v~d 153 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGK-KVAFAQKPNAADEAVLHVID 153 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSS-EEEEEEEETTCSCCEEEEEE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCC-EEEEEECCCCCceEEEEEEE
Confidence 347899888776643 34444544444433332 3444689999999999 555 3 33456899999
Q ss_pred CCCCeeh-hhhhhccccceEEEEEecCCCEEEEEeCCCe-------------EEEEEccCCCCCceeeEEeccCCCCCee
Q psy14906 234 LEDRQVE-NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT-------------LKLWIFDKADGNGRLLRIREGHSAPPNY 299 (583)
Q Consensus 234 ~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~-------------i~~w~~~~~~~~~~~~~~~~~~~~~v~~ 299 (583)
+.+++.+ ... .. ......++|+|||+.|+.++.|.. |++|++........++.....+...+..
T Consensus 154 l~tg~~~~~~~-~~-~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~ 231 (695)
T 2bkl_A 154 VDSGEWSKVDV-IE-GGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQ 231 (695)
T ss_dssp TTTCCBCSSCC-BS-CCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEE
T ss_pred CCCCCCcCCcc-cC-cccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEE
Confidence 9998865 211 11 111267899999999999988776 9999765432222344444455567889
Q ss_pred EEEeeCCCCEEEEeeCCC----cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccc
Q psy14906 300 IQFYGNSSDNILSAAGDS----TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWN 375 (583)
Q Consensus 300 ~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (583)
+.|+| ||++|+..+.++ .|++|+..++.......
T Consensus 232 ~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~----------------------------------------- 269 (695)
T 2bkl_A 232 SDLSR-DGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK----------------------------------------- 269 (695)
T ss_dssp EEECT-TSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE-----------------------------------------
T ss_pred EEECC-CCCEEEEEEeCCCCceEEEEEcCCCCceEEeec-----------------------------------------
Confidence 99997 888888777655 55555543322111000
Q ss_pred cEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec----CceEEEEEcccCcc--ccc
Q psy14906 376 NIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS----SGHVDRFNIQSGAH--RGS 449 (583)
Q Consensus 376 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~~~--~~~ 449 (583)
+........+ ++|+ +++.+. ++.|.+||+.++.. ...
T Consensus 270 -----------------------------------~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~ 312 (695)
T 2bkl_A 270 -----------------------------------GVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKE 312 (695)
T ss_dssp -----------------------------------CSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEE
T ss_pred -----------------------------------CCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeE
Confidence 0012333444 6666 544443 58899999987753 122
Q ss_pred cCCCCCCCc-ccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeec--cCCeeeEEeccCCcEEEEEeC----
Q psy14906 450 YGHDNQPGH-VGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL--DNGISFFRTHQESSMLAVCLD---- 522 (583)
Q Consensus 450 ~~~~~~~~h-~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~---- 522 (583)
+. ..+ ...+..++++ ++.++++...|+..++|.+.... .....+.. ...+..+.++|+++.++....
T Consensus 313 l~----~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g-~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~ 386 (695)
T 2bkl_A 313 IV----PEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKG-KPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTT 386 (695)
T ss_dssp EE----CCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC-CEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTE
T ss_pred Ee----cCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC-CeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCC
Confidence 21 222 4568888998 77888999999998888776321 44444443 346778889999987764433
Q ss_pred CceEEEEEccccce
Q psy14906 523 DFTVNIIDIDTCTI 536 (583)
Q Consensus 523 dg~i~i~d~~~~~~ 536 (583)
.++|++||+.+++.
T Consensus 387 P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 387 PRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEEEEEETTTCCE
T ss_pred CCEEEEEECCCCcE
Confidence 47899999988764
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-14 Score=136.51 Aligned_cols=279 Identities=9% Similarity=-0.018 Sum_probs=182.5
Q ss_pred EecCCCCEEEEEcC--CC---cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEe----------CCCeEEEEE
Q psy14906 212 FRTDGPPMMVSGSN--TG---HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS----------PDNTLKLWI 276 (583)
Q Consensus 212 ~~~~~~~~l~s~~~--dg---~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~----------~d~~i~~w~ 276 (583)
..|+++ .+++... .. .|.+||..+++.+..+..+ ..+ .++++|||++++.+. .++.|.+||
T Consensus 28 ~~~~~~-~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g-~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 28 PGADGR-RSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG-FLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred CCCCCC-EEEEeCCcccCCccEEEEEECCCCeEEEEecCC-CCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 346776 5555543 22 7899999999988877333 223 899999999998886 367899996
Q ss_pred ccCCCCCceeeEEeccC-------CCCCeeEEEeeCCCCEEEEeeC--CCcEEEEEcccccccee-eccchhhhhhhhhh
Q psy14906 277 FDKADGNGRLLRIREGH-------SAPPNYIQFYGNSSDNILSAAG--DSTLRIFNTKSETSNKN-LGIASANRNNLKRK 346 (583)
Q Consensus 277 ~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~ 346 (583)
.. ..+.+..+.-. ......+.++| |+++|+.+.. ++.|.++| .+++.... +..
T Consensus 104 ~~----t~~~~~~i~~~~~~~~~~g~~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~----------- 166 (373)
T 2mad_H 104 PV----TFLPIADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS----------- 166 (373)
T ss_pred CC----CCcEEEEEECCCccccccCCCccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-----------
Confidence 64 33333333211 12356889997 8999998874 47899999 88765443 210
Q ss_pred cchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCC-c
Q psy14906 347 NRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCG-N 425 (583)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~ 425 (583)
..++.+.|++ +
T Consensus 167 --------------------------------------------------------------------~~~~~~~~~~~~ 178 (373)
T 2mad_H 167 --------------------------------------------------------------------PTCYHIHPGAPS 178 (373)
T ss_pred --------------------------------------------------------------------CceEEEEeCCCc
Confidence 1123344444 3
Q ss_pred EEEEEecCceEEEEEcccCccccccCC-CCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeec---
Q psy14906 426 FVLIGYSSGHVDRFNIQSGAHRGSYGH-DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL--- 501 (583)
Q Consensus 426 ~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--- 501 (583)
.+++.+.||.+.++|. +++....... ....+.........+.+++..++..+..+.+.+.|+.......+..+..
T Consensus 179 ~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~ 257 (373)
T 2mad_H 179 TFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSG 257 (373)
T ss_pred eEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCC
Confidence 4455566788888888 6665522210 0000111112335566766555444567899999987652222232221
Q ss_pred --------cCCeeeEEeccCCcEEEEEeC----------CceEEEEEccccceEEeecccccceeeEEecCCCc-EEEEE
Q psy14906 502 --------DNGISFFRTHQESSMLAVCLD----------DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSR-WLITA 562 (583)
Q Consensus 502 --------~~~v~~~~~s~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~-~l~s~ 562 (583)
......++++|+++.++++.. .+.|.++|+.+++.+.++.. ......++|+|||+ +++++
T Consensus 258 ~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~ 336 (373)
T 2mad_H 258 GRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYAL 336 (373)
T ss_pred cccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEE
Confidence 123444789999998877653 35899999999999988863 34689999999999 77777
Q ss_pred e-CCCeEEEEeCCCcccccc
Q psy14906 563 S-MDCTIRVWDIPSSQLIDC 581 (583)
Q Consensus 563 ~-~d~~i~vw~~~~~~~~~~ 581 (583)
. .++.|.+||+.+++.+++
T Consensus 337 ~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 337 SAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred cCCCCeEEEEECCCCCEEee
Confidence 6 589999999999998876
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.74 E-value=3.1e-16 Score=161.47 Aligned_cols=283 Identities=7% Similarity=-0.029 Sum_probs=178.2
Q ss_pred EccCCCEEEEEeCCC---cEEEE--EcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe-----cCCeE
Q psy14906 117 ILPFGPHLISVDEES---NVKVW--DIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL-----SNKKI 186 (583)
Q Consensus 117 is~~~~~l~s~~~dg---~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-----~d~~i 186 (583)
.+|+|++++....++ .-.+| +...++....+..... ..+|...+..++|||||++||.+. .+..|
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~-----a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i 149 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGW-----SKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVL 149 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGS-----SSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHh-----ccCCCEEEEEEEECCCCCEEEEEECCCCCceEEE
Confidence 379999988766543 33444 4444443322221100 014556799999999999999543 34689
Q ss_pred EEEEccCCcee-EEEeccCCCeEEEEEecCCCCEEEEEcCCCc-------------EEEEeCCCCe----ehhhhhhccc
Q psy14906 187 ILHNILTDESL-MEFIQTWGPVTALSFRTDGPPMMVSGSNTGH-------------LTVWNLEDRQ----VENQIKKAHR 248 (583)
Q Consensus 187 ~iw~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~-------------i~vwd~~~~~----~~~~~~~~~~ 248 (583)
++||+.+++.+ .. .........++|+|||+ .|+.++.+.. |++|++.+++ ++... ..|.
T Consensus 150 ~v~dl~tg~~~~~~-~~~~~~~~~~~wspDg~-~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~-~~~~ 226 (695)
T 2bkl_A 150 HVIDVDSGEWSKVD-VIEGGKYATPKWTPDSK-GFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHER-TGDP 226 (695)
T ss_dssp EEEETTTCCBCSSC-CBSCCTTCCCEECTTSS-EEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECC-CCCT
T ss_pred EEEECCCCCCcCCc-ccCcccccceEEecCCC-EEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEec-CCCC
Confidence 99999998865 21 11111226899999999 7777776665 9999998775 23222 3455
Q ss_pred cceEEEEEecCCCEEEEEeCCC--eEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee---CCCcEEEEE
Q psy14906 249 KVVTGAHFLYNEPLLVTSSPDN--TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA---GDSTLRIFN 323 (583)
Q Consensus 249 ~~v~~~~~~~~~~~l~s~~~d~--~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~dg~i~iwd 323 (583)
..+..+.|+|||++|+..+.++ ...+|-++...+. ...+..+...+....+ + ++++++... .++.|.+||
T Consensus 227 ~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~~~~~~-~-~g~l~~~s~~~~~~~~l~~~d 301 (695)
T 2bkl_A 227 TTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD---FRLLVKGVGAKYEVHA-W-KDRFYVLTDEGAPRQRVFEVD 301 (695)
T ss_dssp TCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS---CEEEEECSSCCEEEEE-E-TTEEEEEECTTCTTCEEEEEB
T ss_pred EEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc---eEEeecCCCceEEEEe-c-CCcEEEEECCCCCCCEEEEEe
Confidence 6788999999999988877655 4445544543222 3334445556666666 4 455444433 257888888
Q ss_pred ccccccc--eeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccccee
Q psy14906 324 TKSETSN--KNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401 (583)
Q Consensus 324 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 401 (583)
+.++... +.+..
T Consensus 302 ~~~~~~~~~~~l~~------------------------------------------------------------------ 315 (695)
T 2bkl_A 302 PAKPARASWKEIVP------------------------------------------------------------------ 315 (695)
T ss_dssp TTBCSGGGCEEEEC------------------------------------------------------------------
T ss_pred CCCCCccCCeEEec------------------------------------------------------------------
Confidence 8665320 11000
Q ss_pred eecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcc-cCccccccCCCCCCCc-ccCeeEEEEeCCCcEEE----
Q psy14906 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQ-SGAHRGSYGHDNQPGH-VGGVRGVVSDNLNQIVI---- 475 (583)
Q Consensus 402 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~---- 475 (583)
......+..++++ ++.++++...++..++|.+. +++....+ ..+ .+.+..++++|+++.++
T Consensus 316 -------~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l-----~~~~~~~v~~~~~s~d~~~l~~~~s 382 (695)
T 2bkl_A 316 -------EDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTV-----QLPGVGAASNLMGLEDLDDAYYVFT 382 (695)
T ss_dssp -------CCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEEC-----CCSSSSEECCCBSCTTCSEEEEEEE
T ss_pred -------CCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEe-----cCCCCeEEEEeecCCCCCEEEEEEc
Confidence 0001235667777 67788888889888887665 35444444 233 66788889999997766
Q ss_pred EeecCCcEEEEEccCC
Q psy14906 476 SGGNDQTVKVWHFKQT 491 (583)
Q Consensus 476 s~~~dg~i~iwd~~~~ 491 (583)
+....++|++||+.++
T Consensus 383 s~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 383 SFTTPRQIYKTSVSTG 398 (695)
T ss_dssp ETTEEEEEEEEETTTC
T ss_pred CCCCCCEEEEEECCCC
Confidence 3334578999999887
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-15 Score=138.08 Aligned_cols=241 Identities=12% Similarity=0.070 Sum_probs=170.9
Q ss_pred ccccceEEEEEecCCC-EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEc
Q psy14906 246 AHRKVVTGAHFLYNEP-LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324 (583)
Q Consensus 246 ~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 324 (583)
.+.....+++|+|+++ +++++..++.|..|+.+ . . ...+..+...+.+++++| +++++++...++.|.+||.
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~--~---~-~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDD--G---Q-LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETT--S---C-EEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECS
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECC--C---C-eEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcC
Confidence 3445678899999998 77788888999999653 2 2 445556667789999997 7887777767789999998
Q ss_pred cccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeec
Q psy14906 325 KSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVP 404 (583)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 404 (583)
.+++........
T Consensus 98 ~~g~~~~~~~~~-------------------------------------------------------------------- 109 (296)
T 3e5z_A 98 PGGEWESIADSF-------------------------------------------------------------------- 109 (296)
T ss_dssp TTCCEEEEECEE--------------------------------------------------------------------
T ss_pred CCCcEEEEeecc--------------------------------------------------------------------
Confidence 766532211000
Q ss_pred ccccccCCCCceEEEEccCCcEEEE----Ee-------------cCceEEEEEcccCccccccCCCCCCCcccCeeEEEE
Q psy14906 405 ERCKQAKQSKPTCVYITHCGNFVLI----GY-------------SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVS 467 (583)
Q Consensus 405 ~~~~~~~~~~i~~~~~s~~~~~l~~----~~-------------~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 467 (583)
.......+..++++|+|+++++ |+ ..+.|..++.. ++.. .+ ..+......++|
T Consensus 110 ---~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~-----~~~~~~~~gi~~ 179 (296)
T 3e5z_A 110 ---EGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-AP-----IRDRVKPNGLAF 179 (296)
T ss_dssp ---TTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EE-----ECCCSSEEEEEE
T ss_pred ---CCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-Ee-----ecCCCCCccEEE
Confidence 0000135678999999998887 33 13456666655 4432 22 245566789999
Q ss_pred eCCCcEEEEeecCCcEEEEEcc-CCCCCc---eEEee-ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecc
Q psy14906 468 DNLNQIVISGGNDQTVKVWHFK-QTGKPP---LRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG 542 (583)
Q Consensus 468 s~~~~~l~s~~~dg~i~iwd~~-~~~~~~---~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 542 (583)
+|+++.+++.+.++.|.+|++. .+ .. ...+. ....+..++++++|+++++. ++.|.+||.+ ++.+..+..
T Consensus 180 s~dg~~lv~~~~~~~i~~~~~~~~g--~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~ 254 (296)
T 3e5z_A 180 LPSGNLLVSDTGDNATHRYCLNARG--ETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLT 254 (296)
T ss_dssp CTTSCEEEEETTTTEEEEEEECSSS--CEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEEC
T ss_pred CCCCCEEEEeCCCCeEEEEEECCCC--cCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEEC
Confidence 9999988777788999999997 33 33 22221 23457789999999876666 7899999987 778888887
Q ss_pred cccceeeEEe-cCCCcEEEEEeCCCeEEEEeCCCccc
Q psy14906 543 HMGQLTDADF-SPDSRWLITASMDCTIRVWDIPSSQL 578 (583)
Q Consensus 543 h~~~v~~l~~-s~d~~~l~s~~~d~~i~vw~~~~~~~ 578 (583)
+.. +++++| +|+++.|+.++.++ +.-++..++++
T Consensus 255 ~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 255 PQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL 289 (296)
T ss_dssp SSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred CCC-ceeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence 777 999999 68999898888764 55556666554
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.5e-14 Score=130.36 Aligned_cols=281 Identities=8% Similarity=-0.007 Sum_probs=191.9
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEE-eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEF-IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
.+...+.+++++++|+++++...++.|.+||.. ++..... ..+...+.++++.+++. ++++...++.|..||.. ++
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~ 88 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE-VWFTENAANKIGRITKK-GI 88 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SC
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC-EEEeCCCCCeEEEECCC-Cc
Confidence 445688999999999988876667899999987 5443222 23446799999999998 77777778889999986 33
Q ss_pred eh-hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC
Q psy14906 239 VE-NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS 317 (583)
Q Consensus 239 ~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 317 (583)
.. ..+ ......+.++++.++++++++...++.|..|+. .+... ..........+..+++.+ ++...++...++
T Consensus 89 ~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~---~g~~~-~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~ 162 (299)
T 2z2n_A 89 IKEYTL-PNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD---DGKIR-EYELPNKGSYPSFITLGS-DNALWFTENQNN 162 (299)
T ss_dssp EEEEEC-SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT---TCCEE-EEECSSTTCCEEEEEECT-TSCEEEEETTTT
T ss_pred EEEEeC-CCcCCCceeeEECCCCCEEEEecCCceEEEECC---CCCEE-EecCCCCCCCCceEEEcC-CCCEEEEeCCCC
Confidence 21 112 124457889999999988887777888888854 21222 122233445678899986 677776666678
Q ss_pred cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccc
Q psy14906 318 TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKM 397 (583)
Q Consensus 318 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 397 (583)
.|..||. +++.... ...
T Consensus 163 ~i~~~~~-~g~~~~~----------------------------------------------------------~~~---- 179 (299)
T 2z2n_A 163 AIGRITE-SGDITEF----------------------------------------------------------KIP---- 179 (299)
T ss_dssp EEEEECT-TCCEEEE----------------------------------------------------------ECS----
T ss_pred EEEEEcC-CCcEEEe----------------------------------------------------------eCC----
Confidence 8999987 4432110 000
Q ss_pred cceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEe
Q psy14906 398 DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISG 477 (583)
Q Consensus 398 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 477 (583)
.....+..++++++|++.++...++.|.+||. +++... +.. ..+...+.+++++++|+++++.
T Consensus 180 ------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~---~~~~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 180 ------------TPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKI---PTPNARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp ------------STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EEC---SSTTCCEEEEEECSTTCEEEEE
T ss_pred ------------CCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EEC---CCCCCCceeEEECCCCCEEEec
Confidence 00135778999999997777767889999998 665433 211 3455678999999999977776
Q ss_pred ecCCcEEEEEccCCCCCceEEee---ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccc
Q psy14906 478 GNDQTVKVWHFKQTGKPPLRSIK---LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT 535 (583)
Q Consensus 478 ~~dg~i~iwd~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 535 (583)
..++.|..||.. + . +..+. ....+.++++ ++|+++++.. .+.+..++.++++
T Consensus 243 ~~~~~i~~~d~~-g--~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 243 WGANKIGRLTSN-N--I-IEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp TTTTEEEEEETT-T--E-EEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC---
T ss_pred cCCceEEEECCC-C--c-eEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCccc
Confidence 677899999983 3 2 33332 2256888999 8888766654 5677778776543
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=99.73 E-value=2.7e-14 Score=133.83 Aligned_cols=288 Identities=10% Similarity=-0.027 Sum_probs=191.1
Q ss_pred eeCCCCCEEEEEec--CC---eEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEc----------CCCcEEEEe
Q psy14906 169 EPSPVVDIIGVGLS--NK---KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS----------NTGHLTVWN 233 (583)
Q Consensus 169 ~~s~~~~~l~~~~~--d~---~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~----------~dg~i~vwd 233 (583)
...|+++++.+... .. .|.++|..+++.+.++.....+ .++++|||+ .++.+. .++.|.+||
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~-~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGS-EFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCC-EEEEEeccccccccCCCCCeEEEEE
Confidence 44578887777653 22 8899999999998888765444 999999999 555554 367899999
Q ss_pred CCCCeehhhhhhc------cccceEEEEEecCCCEEEEEeC--CCeEEEEEccCCCCCceeeEE-eccCCCCCeeEEEee
Q psy14906 234 LEDRQVENQIKKA------HRKVVTGAHFLYNEPLLVTSSP--DNTLKLWIFDKADGNGRLLRI-REGHSAPPNYIQFYG 304 (583)
Q Consensus 234 ~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~s~~~--d~~i~~w~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~ 304 (583)
..+.+.+..+..+ +......++|+|||++|+.+.. ++.|.++| + ..+.+.. +... .++.+.|
T Consensus 104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~----t~~~~~~~i~~~----~~~~~~~ 174 (373)
T 2mad_H 104 PVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-Q----GGSSDDQLLSSP----TCYHIHP 174 (373)
T ss_pred CCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-C----CCCEEeEEcCCC----ceEEEEe
Confidence 9988777665221 0123457899999999998874 47899986 4 3455555 4321 2345556
Q ss_pred CCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCC
Q psy14906 305 NSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGK 384 (583)
Q Consensus 305 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (583)
.....+++.+.||.+.++|. +++.........
T Consensus 175 ~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~----------------------------------------------- 206 (373)
T 2mad_H 175 GAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGA----------------------------------------------- 206 (373)
T ss_pred CCCceEEEEcCCCCEEEEEC-CCcEEEEEeccc-----------------------------------------------
Confidence 45566777888999999998 665432110000
Q ss_pred ceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcc--ccccCCCC-----CCC
Q psy14906 385 NKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH--RGSYGHDN-----QPG 457 (583)
Q Consensus 385 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~-----~~~ 457 (583)
.+ .. ...-.....+.+++..++..+..+.+.+.|+.++.. ...+.... ...
T Consensus 207 ----~~-~~-----------------~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~ 264 (373)
T 2mad_H 207 ----ML-TA-----------------AQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTW 264 (373)
T ss_pred ----cc-cC-----------------CcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccce
Confidence 00 00 000012234556655544445678888888865432 11111000 000
Q ss_pred cccCeeEEEEeCCCcEEEEeec----------CCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCc-EEEEEe-CCce
Q psy14906 458 HVGGVRGVVSDNLNQIVISGGN----------DQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS-MLAVCL-DDFT 525 (583)
Q Consensus 458 h~~~v~~~~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~dg~ 525 (583)
.......++++|+++.++.+.. ++.|.++|..+. +.+..+........++|+|||+ +++++. .++.
T Consensus 265 ~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~--~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~ 342 (373)
T 2mad_H 265 RPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG--QTSSQISLGHDVDAISVAQDGGPDLYALSAGTEV 342 (373)
T ss_pred ecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC--EEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCe
Confidence 1223445789999987776543 357999999988 8888888888899999999999 777776 4899
Q ss_pred EEEEEccccceEEee
Q psy14906 526 VNIIDIDTCTIIRKL 540 (583)
Q Consensus 526 i~i~d~~~~~~~~~~ 540 (583)
|.++|+.+++.+..+
T Consensus 343 V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 343 LHIYDAGAGDQDQST 357 (373)
T ss_pred EEEEECCCCCEEeee
Confidence 999999999998774
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=99.73 E-value=3e-15 Score=137.05 Aligned_cols=249 Identities=13% Similarity=0.079 Sum_probs=168.3
Q ss_pred CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEE
Q psy14906 194 DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLK 273 (583)
Q Consensus 194 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~ 273 (583)
+..+..+..+.....+++|+|+++.+++++..++.|..||..++ ...+ ..+...+.+++++++|+++++...++.|.
T Consensus 17 ~~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~-~~~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 17 GAEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPE-MHPSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEE-ESSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred CCcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEE-ECCCCCcceeeECCCCcEEEEecCCCeEE
Confidence 34445555555778899999999767888888999999999877 4444 45667899999999999888777778899
Q ss_pred EEEccCCCCCceeeEE-ecc-CCCCCeeEEEeeCCCCEEEEeeC-----------------CCcEEEEEccccccceeec
Q psy14906 274 LWIFDKADGNGRLLRI-REG-HSAPPNYIQFYGNSSDNILSAAG-----------------DSTLRIFNTKSETSNKNLG 334 (583)
Q Consensus 274 ~w~~~~~~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~~l~~~~~-----------------dg~i~iwd~~~~~~~~~~~ 334 (583)
+|+. .++....+.. ..+ ....+..++++| +|+++++.+. .+.|..++.. ++.
T Consensus 94 ~~d~--~~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~----- 164 (296)
T 3e5z_A 94 RQRE--PGGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL----- 164 (296)
T ss_dssp EECS--TTCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-----
T ss_pred EEcC--CCCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-----
Confidence 9954 3222222211 111 123567889987 7877776321 1223333222 110
Q ss_pred cchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCC
Q psy14906 335 IASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSK 414 (583)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (583)
... ......
T Consensus 165 -----------------------------------------------------~~~------------------~~~~~~ 173 (296)
T 3e5z_A 165 -----------------------------------------------------SAP------------------IRDRVK 173 (296)
T ss_dssp -----------------------------------------------------EEE------------------ECCCSS
T ss_pred -----------------------------------------------------EEe------------------ecCCCC
Confidence 000 000134
Q ss_pred ceEEEEccCCcEEEEEecCceEEEEEcc-cCcc---ccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccC
Q psy14906 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQ-SGAH---RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQ 490 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 490 (583)
+..++|+|+++.+++.+.++.|++|++. ++.. ...+ ..+...+.+++++++|+++++. ++.|.+|+..
T Consensus 174 ~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-----~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~- 245 (296)
T 3e5z_A 174 PNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-----TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD- 245 (296)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-----CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-
T ss_pred CccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-----eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-
Confidence 6789999999998777778999999987 4443 2222 1345567789999999977666 7889999987
Q ss_pred CCCCceEEeeccCCeeeEEe-ccCCcEEEEEeCCceEEEEEccccce
Q psy14906 491 TGKPPLRSIKLDNGISFFRT-HQESSMLAVCLDDFTVNIIDIDTCTI 536 (583)
Q Consensus 491 ~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~dg~i~i~d~~~~~~ 536 (583)
+ +.+..+..+..+.+++| +|+++.|++++.+ .+.-++.++.++
T Consensus 246 g--~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~ 289 (296)
T 3e5z_A 246 G--DELGRVLTPQTTSNLCFGGPEGRTLYMTVST-EFWSIETNVRGL 289 (296)
T ss_dssp S--CEEEEEECSSCCCEEEEESTTSCEEEEEETT-EEEEEECSCCBC
T ss_pred C--CEEEEEECCCCceeEEEECCCCCEEEEEcCC-eEEEEEcccccc
Confidence 4 66666666555899999 5899999998876 455556655543
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.72 E-value=8.4e-15 Score=137.47 Aligned_cols=288 Identities=10% Similarity=0.024 Sum_probs=196.7
Q ss_pred CCCCCEEEEEecC-----CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEc---------CCCcEEEEeCCC
Q psy14906 171 SPVVDIIGVGLSN-----KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS---------NTGHLTVWNLED 236 (583)
Q Consensus 171 s~~~~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---------~dg~i~vwd~~~ 236 (583)
.++++.+.+.... +.|.++|..+++.+.++.....+ .++++||+++++++.. .++.|.++|..+
T Consensus 81 ~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 81 APDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 3577777666553 69999999999999999866455 8999999995444432 467899999999
Q ss_pred Ceehhhhhhc------cccceEEEEEecCCCEEEEEeC--CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCC
Q psy14906 237 RQVENQIKKA------HRKVVTGAHFLYNEPLLVTSSP--DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSD 308 (583)
Q Consensus 237 ~~~~~~~~~~------~~~~v~~~~~~~~~~~l~s~~~--d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 308 (583)
++.+..+..+ .......+.|+|||++++.+.. ++.|.+.|+. ..+.+..+.-.. +....|....
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~----t~kvv~~I~v~g----~~~~~p~g~~ 230 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLE----GKTFDRMLDVPD----CYHIFPASPT 230 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETT----TTEEEEEEECCS----EEEEEEEETT
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECC----CCeEEEEEEcCC----ceeeccCCCc
Confidence 9888776322 1123457899999999998874 5789999664 455565554311 1334443446
Q ss_pred EEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEE
Q psy14906 309 NILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVS 388 (583)
Q Consensus 309 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 388 (583)
.+++.+.||.+.+.+..+++...... .
T Consensus 231 ~~v~~~~dG~~~~V~~~~~~v~~~~~-----------------------------------------------------~ 257 (426)
T 3c75_H 231 VFYMNCRDGSLARVDFADGETKVTNT-----------------------------------------------------E 257 (426)
T ss_dssp EEEEEETTSSEEEEECCTTCCEEEEC-----------------------------------------------------C
T ss_pred EEEEEcCCCCEEEEECCCCcEEEEee-----------------------------------------------------e
Confidence 77778889998888885443221100 0
Q ss_pred EeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccc--cccCCC--CC---CCcccC
Q psy14906 389 LWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHR--GSYGHD--NQ---PGHVGG 461 (583)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~--~~---~~h~~~ 461 (583)
.++.... .....+.+.++++.++.....+.+.+.|...+... ..+... .. ......
T Consensus 258 ~~~v~~~-----------------p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g 320 (426)
T 3c75_H 258 VFHTEDE-----------------LLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGG 320 (426)
T ss_dssp CCSCTTS-----------------CBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECS
T ss_pred eeccCCC-----------------ceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCC
Confidence 0111100 01123467888888777778899999998654421 111000 00 001122
Q ss_pred eeEEEEeCCCcEEEEeec----------CCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCc-EEEEEe-CCceEEEE
Q psy14906 462 VRGVVSDNLNQIVISGGN----------DQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS-MLAVCL-DDFTVNII 529 (583)
Q Consensus 462 v~~~~~s~~~~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~dg~i~i~ 529 (583)
...++++|+++.++.... ++.|.+.|..+. +.+..+........++|+|||+ ++++.. .++.|.++
T Consensus 321 ~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~--kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVI 398 (426)
T 3c75_H 321 WQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG--ERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIY 398 (426)
T ss_dssp SSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC--CEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred ceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC--eEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEE
Confidence 234789999887666532 357999999999 8999998888899999999999 888887 58999999
Q ss_pred EccccceEEee
Q psy14906 530 DIDTCTIIRKL 540 (583)
Q Consensus 530 d~~~~~~~~~~ 540 (583)
|+.+++.+.++
T Consensus 399 D~~t~kvv~tI 409 (426)
T 3c75_H 399 DAATGEELRSV 409 (426)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCCEEEEe
Confidence 99999999886
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.6e-15 Score=133.05 Aligned_cols=219 Identities=11% Similarity=0.045 Sum_probs=167.1
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCC-CCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccch
Q psy14906 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS-APPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIAS 337 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 337 (583)
.+++|++++.++.|.+||.. +++.+..+..+. ..+.++.++| +++.++ +.++.|..||. +++.+..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~----tG~~~w~~~~~~~~~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~~~W~~---- 71 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKD----TKEIVWEYPLEKGWECNSVAATK-AGEILF--SYSKGAKMITR-DGRELWNI---- 71 (276)
T ss_dssp CCEEEEECTTCSEEEEEETT----TTEEEEEEECCTTCCCCEEEECT-TSCEEE--ECBSEEEEECT-TSCEEEEE----
T ss_pred CCcEEEeeCCCCEEEEEECC----CCeEEEEeCCCccCCCcCeEECC-CCCEEE--eCCCCEEEECC-CCCEEEEE----
Confidence 46789999999999999543 567777777665 4688999997 788888 45678999998 66543322
Q ss_pred hhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceE
Q psy14906 338 ANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTC 417 (583)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 417 (583)
... ....+.+
T Consensus 72 -------------------------------------------------------~~~---------------~~~~~~~ 81 (276)
T 3no2_A 72 -------------------------------------------------------AAP---------------AGCEMQT 81 (276)
T ss_dssp -------------------------------------------------------ECC---------------TTCEEEE
T ss_pred -------------------------------------------------------cCC---------------CCccccc
Confidence 110 0024667
Q ss_pred EEEccCCcEEEEEec-CceEEEEEcccCccccccCCCC-CCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCc
Q psy14906 418 VYITHCGNFVLIGYS-SGHVDRFNIQSGAHRGSYGHDN-QPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPP 495 (583)
Q Consensus 418 ~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 495 (583)
+.+.++|+++++.+. ++.+..+|. +++.+..+.... ...+......+++.++|+++++...++.|..||.+ + +.
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G--~~ 157 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G--QL 157 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S--CE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C--CE
Confidence 889999999999887 888888886 677665553210 01233456677889999999999999999999998 7 88
Q ss_pred eEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccc------cceeeEEecCCCcEEEEEe
Q psy14906 496 LRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM------GQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 496 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~------~~v~~l~~s~d~~~l~s~~ 563 (583)
+..+.....+..+...++|++++++..++.|..+|.++|+.+.++..+. ..+..++..++|..+++..
T Consensus 158 ~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 158 LNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 8888877778888899999999999989999999999999998886432 2277888889999888773
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.71 E-value=6.1e-15 Score=133.14 Aligned_cols=242 Identities=7% Similarity=-0.029 Sum_probs=169.0
Q ss_pred ceEEEEEecCCCEEE-EEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccc
Q psy14906 250 VVTGAHFLYNEPLLV-TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328 (583)
Q Consensus 250 ~v~~~~~~~~~~~l~-s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 328 (583)
...++++++++++++ +...++.|..|+.+ . .........+...+.++++.+ +++.+++.. ++.|.+||.....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~--~--~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATG--S--TGTTVLPFNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC---------EECCCCSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCC--C--cccceEeeCCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCce
Confidence 678899999999777 54678889999532 1 111111122335678899986 677555555 8899999976542
Q ss_pred cceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccccc
Q psy14906 329 SNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCK 408 (583)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 408 (583)
... +..
T Consensus 99 ~~~-~~~------------------------------------------------------------------------- 104 (270)
T 1rwi_B 99 QTV-LPF------------------------------------------------------------------------- 104 (270)
T ss_dssp CEE-CCC-------------------------------------------------------------------------
T ss_pred Eee-eec-------------------------------------------------------------------------
Confidence 210 000
Q ss_pred ccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEc
Q psy14906 409 QAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHF 488 (583)
Q Consensus 409 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 488 (583)
.....+..++++++|+++++...++.|.+|+..+....... ......+.+++++++++++++...++.|.+||.
T Consensus 105 -~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 105 -DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP-----FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp -CSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC-----CCSCCSCCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred -CCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec-----cccCCCceeEEEeCCCCEEEEECCCCEEEEEec
Confidence 00035778999999997777777889999976554433221 233456789999999998777777889999998
Q ss_pred cCCCCCceEEee-ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCe
Q psy14906 489 KQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCT 567 (583)
Q Consensus 489 ~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~ 567 (583)
... ....... ....+..++++++|.++++...++.|.+||............+...+.+++++++|+++++...++.
T Consensus 179 ~~~--~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~ 256 (270)
T 1rwi_B 179 ESN--NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR 256 (270)
T ss_dssp TTC--CEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTE
T ss_pred CCC--ceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCE
Confidence 765 3332222 2256889999999977777777889999998765544333334467899999999998888889999
Q ss_pred EEEEeCCCcccc
Q psy14906 568 IRVWDIPSSQLI 579 (583)
Q Consensus 568 i~vw~~~~~~~~ 579 (583)
|+++++...+.+
T Consensus 257 v~~~~~~~~~~~ 268 (270)
T 1rwi_B 257 VVKLTSLEHHHH 268 (270)
T ss_dssp EEEECCCGGGSC
T ss_pred EEEEcCCCcccc
Confidence 999999877654
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=99.70 E-value=8.9e-15 Score=131.15 Aligned_cols=213 Identities=12% Similarity=0.060 Sum_probs=165.6
Q ss_pred ceEEEEeeCCeEEEEecCCcEEEeecCCCC-CCeEEEEe--eCeEEEEEcCCeEEEEeccceeeeeecccC-ccEEEE--
Q psy14906 44 ETLFVTCVGKAFHVYGCNHFKLLSVSPQHE-DDITCLSS--DFFHIYTSANNIIYAWRRGIDIVGTYKGHT-SPVHLI-- 117 (583)
Q Consensus 44 ~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~-~~v~~~~~--~~~~~~~~~~~~i~vw~~~~~~~~~~~~h~-~~v~~i-- 117 (583)
..+++.+.++.|.+||.++++.+..+..+. ..+.++++ +|++++ +.++.|..||.+++.+..+..+. ..+.++
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~~~~~~~~~~~~~~ 84 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITRDGRELWNIAAPAGCEMQTARI 84 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECTTSCEEEEEECCTTCEEEEEEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECCCCCEEEEEcCCCCccccccEE
Confidence 455556689999999999999999888765 45666665 778777 67889999999888888888653 456554
Q ss_pred ccCCCEEEEEeC-CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCce
Q psy14906 118 LPFGPHLISVDE-ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDES 196 (583)
Q Consensus 118 s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~ 196 (583)
.++|+++++.+. ++.|..+|. +|+.+.++.+..... .+......+++.++|++|++...++.|..||.+ |+.
T Consensus 85 ~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~-----~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 85 LPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIE-----RPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp CTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCS-----SGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCC-----cccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 899999999887 778888885 688887776432100 112234556789999999999999999999998 999
Q ss_pred eEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccc------cceEEEEEecCCCEEEEEe
Q psy14906 197 LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHR------KVVTGAHFLYNEPLLVTSS 267 (583)
Q Consensus 197 ~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l~s~~ 267 (583)
+.++..+ ..+.++.+.++|+ +++++..++.|..+|..+++.+.++ ..+. ..+..+...++|+.+++..
T Consensus 158 ~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~~w~~-~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 158 LNSVKLS-GTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNRIVRRV-NANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEECS-SCCCEEEECTTSC-EEEECBTTSEEEEECTTTCCEEEEE-EGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEECC-CCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCcEEEEe-cCCCCCCccccccccceEcCCCCEEEEec
Confidence 9999876 5667788899998 8888888889999999999988777 2221 2377888889998888764
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.6e-14 Score=134.10 Aligned_cols=301 Identities=9% Similarity=-0.035 Sum_probs=196.8
Q ss_pred ccCCCEEEEEeCC-----CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe----------c
Q psy14906 118 LPFGPHLISVDEE-----SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL----------S 182 (583)
Q Consensus 118 s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----------~ 182 (583)
.++++++++.... +.|.+.|..+++.+.++.. ...+ .++++||+++|.++. .
T Consensus 81 ~~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v-----------G~~P--gia~SpDgk~lyVan~~~~~~~~G~~ 147 (426)
T 3c75_H 81 APDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG-----------GFLP--HPVAAEDGSFFAQASTVFERIARGKR 147 (426)
T ss_dssp CCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE-----------CSSC--EEEECTTSSCEEEEEEEEEETTEEEE
T ss_pred CCCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC-----------CCCC--ceEECCCCCEEEEEeccccccccCCC
Confidence 5677777776553 6999999999999999973 3344 799999999888876 3
Q ss_pred CCeEEEEEccCCceeEEEecc-------CCCeEEEEEecCCCCEEEEEcC--CCcEEEEeCCCCeehhhhhhccccceEE
Q psy14906 183 NKKIILHNILTDESLMEFIQT-------WGPVTALSFRTDGPPMMVSGSN--TGHLTVWNLEDRQVENQIKKAHRKVVTG 253 (583)
Q Consensus 183 d~~i~iw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~v~~ 253 (583)
++.|.++|..+++.+.++.-. ......+.|+|||+ +++++.. ++.|.+.|+.+++.+..+..+. .
T Consensus 148 ~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk-~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~--- 221 (426)
T 3c75_H 148 TDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNK-NLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C--- 221 (426)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEEECCS--E---
T ss_pred CCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCC-EEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c---
Confidence 678999999999998887632 13456889999999 5665543 6789999999999888773221 1
Q ss_pred EEEecCC-CEEEEEeCCCeEEEEEccCCCCCceeeEE----eccCCCCC-eeEEEeeCCCCEEEEeeCCCcEEEEEcccc
Q psy14906 254 AHFLYNE-PLLVTSSPDNTLKLWIFDKADGNGRLLRI----REGHSAPP-NYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 254 ~~~~~~~-~~l~s~~~d~~i~~w~~~~~~~~~~~~~~----~~~~~~~v-~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
....|++ ..+++.+.||.+.+.+.. ..+.... +.....++ ..+.+.+ ++..++.....+.+.+.|....
T Consensus 222 ~~~~p~g~~~~v~~~~dG~~~~V~~~----~~~v~~~~~~~~~v~~~p~~~~~~~~~-dg~~~~~~s~~g~V~ViD~~~~ 296 (426)
T 3c75_H 222 YHIFPASPTVFYMNCRDGSLARVDFA----DGETKVTNTEVFHTEDELLINHPAFSL-RSGRLVWPTYTGKIFQADLTAE 296 (426)
T ss_dssp EEEEEEETTEEEEEETTSSEEEEECC----TTCCEEEECCCCSCTTSCBCSCCEECT-TTCEEEEEBTTSEEEEEEECSS
T ss_pred eeeccCCCcEEEEEcCCCCEEEEECC----CCcEEEEeeeeeccCCCceeeEeeecC-CCCEEEEEeCCCcEEEEeccCC
Confidence 2233333 455666677777666541 1222211 11111121 2345676 6777776677889999998654
Q ss_pred ccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccc
Q psy14906 328 TSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERC 407 (583)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 407 (583)
.....- -|.+...........
T Consensus 297 ~~~v~~-------------------------------------------------------~~~~~~~~~i~~g~~---- 317 (426)
T 3c75_H 297 GATFRA-------------------------------------------------------PIEALTEAERADDWR---- 317 (426)
T ss_dssp CEEECC-------------------------------------------------------CEESSCTTTGGGTEE----
T ss_pred ceEEee-------------------------------------------------------eeeeccccccccccc----
Confidence 321000 000000000000000
Q ss_pred cccCCCCceEEEEccCCcEEEEEec----------CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc-EEEE
Q psy14906 408 KQAKQSKPTCVYITHCGNFVLIGYS----------SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ-IVIS 476 (583)
Q Consensus 408 ~~~~~~~i~~~~~s~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s 476 (583)
......++++|+++.+++... ++.|.++|..+.+.+..+. -......++|+||++ ++++
T Consensus 318 ----p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~------vg~~P~gia~spDg~~~lyv 387 (426)
T 3c75_H 318 ----PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE------LGHEIDSINVSQDAEPLLYA 387 (426)
T ss_dssp ----ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE------EEEEECEEEECCSSSCEEEE
T ss_pred ----cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEE------CCCCcCeEEEccCCCEEEEE
Confidence 022334689999988887653 4679999999999998873 223588999999999 8887
Q ss_pred ee-cCCcEEEEEccCCCCCceEEeeccCCeeeEEeccC
Q psy14906 477 GG-NDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQE 513 (583)
Q Consensus 477 ~~-~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~ 513 (583)
.. .++.|.++|..+. +.+..+..-+.-..+..+||
T Consensus 388 ~n~~s~~VsVID~~t~--kvv~tI~~vG~~P~~i~~~~ 423 (426)
T 3c75_H 388 LSAGTQTLHIYDAATG--EELRSVDQLGRGPQIITTHD 423 (426)
T ss_dssp EETTTTEEEEEETTTC--CEEEEECCCSSSCCEEECCC
T ss_pred EcCCCCeEEEEECCCC--CEEEEecCCCCCCcEEEcCC
Confidence 77 5899999999998 88877632222222445543
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=99.67 E-value=1.4e-14 Score=130.70 Aligned_cols=233 Identities=6% Similarity=-0.099 Sum_probs=163.1
Q ss_pred cccEEEEEeCCCceEE-EEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eCeEEEEEcCCeEEEEeccceeeeeec
Q psy14906 32 LPVVARFIRRRKETLF-VTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DFFHIYTSANNIIYAWRRGIDIVGTYK 108 (583)
Q Consensus 32 ~~~~~~~~p~~~~~~i-~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~~i~vw~~~~~~~~~~~ 108 (583)
.|..+.+.|+++ .++ +...++.|.+||..+.........+...+.++++ ++++.++..++.|.+||.++.....+.
T Consensus 25 ~p~~i~~~~~g~-l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGN-VYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCC-EEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCC-EEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeee
Confidence 778888977764 444 3357789999998766554433334456677777 457666666889999998765554443
Q ss_pred c-cCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCe
Q psy14906 109 G-HTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKK 185 (583)
Q Consensus 109 ~-h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~ 185 (583)
. .......+ .++|+.+++...++.|.+|+..+........ .....+..++++++|+++++...++.
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~-----------~~~~~p~~i~~~~~g~l~v~~~~~~~ 172 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF-----------TGLNDPDGVAVDNSGNVYVTDTDNNR 172 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC-----------CSCCSCCCEEECTTCCEEEEEGGGTE
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecc-----------ccCCCceeEEEeCCCCEEEEECCCCE
Confidence 2 22456665 7889877776678899999866554332221 23346788999999997777777889
Q ss_pred EEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEE
Q psy14906 186 IILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT 265 (583)
Q Consensus 186 i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s 265 (583)
|.+||............+...+..+++.++|. ++++...++.|.+||.......... ..+...+.+++++++|+++++
T Consensus 173 i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~~~~~~~~~-~~~~~~p~~i~~~~~g~l~v~ 250 (270)
T 1rwi_B 173 VVKLEAESNNQVVLPFTDITAPWGIAVDEAGT-VYVTEHNTNQVVKLLAGSTTSTVLP-FTGLNTPLAVAVDSDRTVYVA 250 (270)
T ss_dssp EEEECTTTCCEEECCCSSCCSEEEEEECTTCC-EEEEETTTSCEEEECTTCSCCEECC-CCSCSCEEEEEECTTCCEEEE
T ss_pred EEEEecCCCceEeecccCCCCceEEEECCCCC-EEEEECCCCcEEEEcCCCCcceeec-cCCCCCceeEEECCCCCEEEE
Confidence 99999876654433333336789999999996 7888877889999998765433222 233467899999999998888
Q ss_pred EeCCCeEEEEEcc
Q psy14906 266 SSPDNTLKLWIFD 278 (583)
Q Consensus 266 ~~~d~~i~~w~~~ 278 (583)
...++.|++++++
T Consensus 251 ~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 251 DRGNDRVVKLTSL 263 (270)
T ss_dssp EGGGTEEEEECCC
T ss_pred ECCCCEEEEEcCC
Confidence 8889999999654
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3.9e-11 Score=125.52 Aligned_cols=485 Identities=10% Similarity=0.065 Sum_probs=279.0
Q ss_pred EEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCC-----CCCCeEEEEee--CeEEEEEcCCeEEEEeccceeeeeecc
Q psy14906 37 RFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQ-----HEDDITCLSSD--FFHIYTSANNIIYAWRRGIDIVGTYKG 109 (583)
Q Consensus 37 ~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~-----h~~~v~~~~~~--~~~~~~~~~~~i~vw~~~~~~~~~~~~ 109 (583)
+...|.++.+-+++.+ -+..||-.+.+....... ....|.++..| |++-+++. +.+..||........+..
T Consensus 47 ~I~qD~~G~lWigT~~-GL~ryDG~~f~~~~~~~~~~~~l~~n~I~~i~~d~~g~lWigT~-~Gl~~yd~~~~~f~~~~~ 124 (795)
T 4a2l_A 47 SIDQDKRGNMWFATYD-GVNKYDGYAFTVYQHNEDDPNSIANDISRIVKTDSQGRVWIGTR-DGLSRYDEEKDIFQNFFY 124 (795)
T ss_dssp EEEECTTSCEEEEETT-EEEEECSSCEEEECCCTTCTTSCSCSCEEEEEECTTSCEEEEES-SCEEEEETTTTEEEEECC
T ss_pred EEEEcCCCCEEEeecC-cCcccCCCceEEEeCCCCCCCcccccceeEEEECCCCCEEEEeC-CchheeCCCCCeEEeccc
Confidence 3444777766665554 467788665444332111 24568899874 46666665 457899975443444432
Q ss_pred cCc----cEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcc-eEEEeeCCCCCEEEEEec
Q psy14906 110 HTS----PVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSC-VNVLEPSPVVDIIGVGLS 182 (583)
Q Consensus 110 h~~----~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~s~~~~~l~~~~~ 182 (583)
... .|.++ .++|...+ ++. +.|..||.++++.. .+... ..... |.++...+++++.+ ++.
T Consensus 125 ~~~~~~~~i~~i~~d~~g~lwi-~t~-~gl~~~~~~~~~~~-~~~~~---------~~~~~~i~~i~~d~~g~lwi-gt~ 191 (795)
T 4a2l_A 125 EKNGKHLQVNGIEEISPEQLLI-STP-EGLIMFDIKESKFI-DDSFS---------TAMHKTIASTLYRQGDQIYI-GTS 191 (795)
T ss_dssp EETTEECCCCEEEEEETTEEEE-EET-TEEEEEETTTTEEE-CSSSC---------HHHHTCCEEEEEEETTEEEE-EES
T ss_pred cccCCCceEEEEEECCCCCEEE-EEC-CceEEEECCCCEEE-eccCC---------CCCCcceEEEEECCCCCEEE-EEC
Confidence 211 17776 45565544 444 55899998776432 11100 00123 88888888886555 555
Q ss_pred CCeEEEEEccCCceeEEE-eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhh------ccccceEEEE
Q psy14906 183 NKKIILHNILTDESLMEF-IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKK------AHRKVVTGAH 255 (583)
Q Consensus 183 d~~i~iw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~------~~~~~v~~~~ 255 (583)
++.+..|+..+++..... ......|.++...+++. +..++.++-+..||..+++....... -....|.++.
T Consensus 192 ~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~--lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 269 (795)
T 4a2l_A 192 TDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTR--IWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLA 269 (795)
T ss_dssp SSCEEEEETTTCCEEECC----CCCEEEEEEEETTE--EEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEE
T ss_pred CCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCC--EEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEE
Confidence 545889998766543321 12346788998888886 44555444599999887654322100 1235799999
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEec-------cCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccc
Q psy14906 256 FLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE-------GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328 (583)
Q Consensus 256 ~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 328 (583)
..++|.+.+ |..+| +.+|+.. ......... -....|.++...+ ++ .|..|+.++-|..++..+..
T Consensus 270 ~d~~g~lWi-gt~~G-l~~~~~~----~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-~g-~lWigt~~~Gl~~~~~~~~~ 341 (795)
T 4a2l_A 270 MDSQNRLWI-GTFND-LNIYHEG----TDSFASYSSNPVENGSLSQRSVRSIFMDS-QG-GMWLGTYFGGLNYYHPIRNR 341 (795)
T ss_dssp ECTTSCEEE-EESSC-EEEEETT----TTEEEEECCCTTSTTSCSSSCEEEEEECT-TS-CEEEEESSSCEEEECGGGGS
T ss_pred EcCCCCEEE-EeCCh-hheEcCC----CCeEEEEecCCCCCCCCCCCcEEEEEEeC-Cc-CEEEEECCCCeEEeCCCccc
Confidence 988887555 44454 7777542 122222111 1234678887764 34 57777777889999876554
Q ss_pred cceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccccc
Q psy14906 329 SNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCK 408 (583)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 408 (583)
... +..... ...+....+..+.. +.+..+-.++.++-+..|+.................
T Consensus 342 ~~~-~~~~~~--------------~~~l~~~~V~~i~~------d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~ 400 (795)
T 4a2l_A 342 FKN-IRNIPY--------------KNSLSDNVVSCIVE------DKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESA 400 (795)
T ss_dssp SEE-ECCCTT--------------SSSCSCSSEEEEEE------CTTSCEEEEESSSCEEEECTTTCCEEEECCC-----
T ss_pred ceE-EcCCCC--------------CCCCCCCeeEEEEE------CCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcc
Confidence 321 110000 00001111111111 112334455666567777766543322211110000
Q ss_pred -ccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE
Q psy14906 409 -QAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487 (583)
Q Consensus 409 -~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 487 (583)
......|.+++..++++.|.+|+.++.|..||..+++........ ...+...|.++...+++++.+... + -+.+||
T Consensus 401 ~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~-~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~ 477 (795)
T 4a2l_A 401 RGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRN-SQLVNENVYAILPDGEGNLWLGTL-S-ALVRFN 477 (795)
T ss_dssp -CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTT-SCCSCSCEEEEEECSSSCEEEEES-S-CEEEEE
T ss_pred cCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCC-CCcCCCeeEEEEECCCCCEEEEec-C-ceeEEe
Confidence 112256889999999986777887777999998877644322100 013456799999998888665443 4 488898
Q ss_pred ccCCCCCceEEee-------ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeec-------ccccceeeEEec
Q psy14906 488 FKQTGKPPLRSIK-------LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLS-------GHMGQLTDADFS 553 (583)
Q Consensus 488 ~~~~~~~~~~~~~-------~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~h~~~v~~l~~s 553 (583)
..++ +...... ....|.++...++|++.+.. . +-+..||..+++. .+. .+...|.++...
T Consensus 478 ~~~~--~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt-~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d 551 (795)
T 4a2l_A 478 PEQR--SFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGG-E-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEA 551 (795)
T ss_dssp TTTT--EEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEE-S-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEEC
T ss_pred CCCC--eEEEccccccccccCCceEEEEEECCCCCEEEEe-C-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEEC
Confidence 8764 3222111 12468889888888866654 4 4588999887665 222 134568899999
Q ss_pred CCCcEEEEEeCCCeEEEEeCCCccc
Q psy14906 554 PDSRWLITASMDCTIRVWDIPSSQL 578 (583)
Q Consensus 554 ~d~~~l~s~~~d~~i~vw~~~~~~~ 578 (583)
++|++.++.. . -|..||..+++.
T Consensus 552 ~~g~lWigT~-~-Gl~~~d~~~~~~ 574 (795)
T 4a2l_A 552 SNGIIWVGTR-E-GFYCFNEKDKQI 574 (795)
T ss_dssp TTSCEEEEES-S-CEEEEETTTTEE
T ss_pred CCCCEEEEeC-C-CceeECCCCCcE
Confidence 9998666443 4 478888776543
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.3e-14 Score=150.31 Aligned_cols=278 Identities=11% Similarity=0.041 Sum_probs=173.4
Q ss_pred CCCCCEEEEEecCCe---EEEEEcc-----CCceeEEEe------ccCCCeEEEEEecCCCCEEEEEc-CCC----cEEE
Q psy14906 171 SPVVDIIGVGLSNKK---IILHNIL-----TDESLMEFI------QTWGPVTALSFRTDGPPMMVSGS-NTG----HLTV 231 (583)
Q Consensus 171 s~~~~~l~~~~~d~~---i~iw~~~-----~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~s~~-~dg----~i~v 231 (583)
+|+|++++....++. -.+|-.. .++....+. ++...+..++|||||+ +|+.+. .+| .|++
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~-~la~~~~~~G~e~~~i~v 193 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGR-LLAYSVQDGGSDWRTVKF 193 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSS-EEEEEEEETTCSEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCC-EEEEEEcCCCCceEEEEE
Confidence 488998887765432 4445443 333332222 2223688999999999 555443 333 5999
Q ss_pred EeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCe--------------EEEEEccCCCCCceeeEEeccCCCCC
Q psy14906 232 WNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT--------------LKLWIFDKADGNGRLLRIREGHSAPP 297 (583)
Q Consensus 232 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~--------------i~~w~~~~~~~~~~~~~~~~~~~~~v 297 (583)
||+.+++.+... .+...+..++|+|| +.|+.++.++. |.+|++.........+.....+...+
T Consensus 194 ~dl~tg~~~~~~--~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~ 270 (741)
T 1yr2_A 194 VGVADGKPLADE--LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRG 270 (741)
T ss_dssp EETTTCCEEEEE--EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred EECCCCCCCCcc--CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEE
Confidence 999998875432 12223357899999 98888876654 77786543211122333333343457
Q ss_pred eeEEEeeCCCCEEEEeeCCC-----cEEEEEcccccc--ceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccc
Q psy14906 298 NYIQFYGNSSDNILSAAGDS-----TLRIFNTKSETS--NKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAR 370 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (583)
..+.|+| ||++|+..+.++ .|++||+.++.. ...+..
T Consensus 271 ~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~----------------------------------- 314 (741)
T 1yr2_A 271 HGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP----------------------------------- 314 (741)
T ss_dssp EEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC-----------------------------------
T ss_pred EEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC-----------------------------------
Confidence 8899997 898888776543 788888876511 111100
Q ss_pred ccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec----CceEEEEEcccC--
Q psy14906 371 EKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS----SGHVDRFNIQSG-- 444 (583)
Q Consensus 371 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~-- 444 (583)
+....... ++|+|+.|+..+. ++.|.+||+.++
T Consensus 315 ----------------------------------------~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~ 353 (741)
T 1yr2_A 315 ----------------------------------------DLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTP 353 (741)
T ss_dssp ----------------------------------------SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSC
T ss_pred ----------------------------------------CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCcc
Confidence 00112222 3488888887765 456999998875
Q ss_pred ccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeec--cCCeeeEEeccCCcEEEEEe-
Q psy14906 445 AHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL--DNGISFFRTHQESSMLAVCL- 521 (583)
Q Consensus 445 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~- 521 (583)
.....+ ..+...+..++++ ++.++++...|+..+||.+.... .....+.. ...+..+.++|+++.++...
T Consensus 354 ~~~~l~-----~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g-~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~s 426 (741)
T 1yr2_A 354 RFDTVV-----PESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDG-KPAGAVSLPGIGSASGLSGRPGDRHAYLSFS 426 (741)
T ss_dssp EEEEEE-----CCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTS-CEEEECBCSSSCEEEEEECCBTCSCEEEEEE
T ss_pred ccEEEe-----cCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC-CceeeccCCCCeEEEEeecCCCCCEEEEEEc
Confidence 223333 3445567778887 66788888899988888765321 44555543 35688899999998666433
Q ss_pred ---CCceEEEEEccccce
Q psy14906 522 ---DDFTVNIIDIDTCTI 536 (583)
Q Consensus 522 ---~dg~i~i~d~~~~~~ 536 (583)
..++|++||+.+++.
T Consensus 427 s~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 427 SFTQPATVLALDPATAKT 444 (741)
T ss_dssp ETTEEEEEEEEETTTTEE
T ss_pred CCCCCCEEEEEECCCCcE
Confidence 247899999988763
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.66 E-value=4.9e-13 Score=122.69 Aligned_cols=279 Identities=10% Similarity=0.028 Sum_probs=189.6
Q ss_pred cCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCC
Q psy14906 203 TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282 (583)
Q Consensus 203 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~ 282 (583)
....+.++++.++|. ++++...++.|.+||.. ++............+.++++.++++++++...++.|..++.+ +
T Consensus 18 ~~~~p~~i~~d~~g~-l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~---g 92 (300)
T 2qc5_A 18 PDSGPYGITSSEDGK-VWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK---G 92 (300)
T ss_dssp TTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT---S
T ss_pred CCCCcceeeECCCCC-EEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC---C
Confidence 346789999999998 77777778999999988 554331112234678899999999988777667888888543 2
Q ss_pred CceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccc
Q psy14906 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVS 362 (583)
Q Consensus 283 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (583)
... ..........+..+++.+ ++..+++...++.|..+|.. ++... +
T Consensus 93 ~~~-~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~-~----------------------------- 139 (300)
T 2qc5_A 93 GFT-EYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYE-Y----------------------------- 139 (300)
T ss_dssp CEE-EEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEE-E-----------------------------
T ss_pred CeE-EecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEEE-c-----------------------------
Confidence 222 122232345678899986 67777776667888888875 32211 0
Q ss_pred eeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcc
Q psy14906 363 QFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQ 442 (583)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~ 442 (583)
... .....+..+++++++++.++...++.|..++.
T Consensus 140 ----------------------------~~~----------------~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~- 174 (300)
T 2qc5_A 140 ----------------------------DLP----------------NKGSYPAFITLGSDNALWFTENQNNSIGRITN- 174 (300)
T ss_dssp ----------------------------ECS----------------STTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred ----------------------------cCC----------------CCCCCceeEEECCCCCEEEEecCCCeEEEECC-
Confidence 000 00145788999999997666666788999998
Q ss_pred cCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEE-ee-ccCCeeeEEeccCCcEEEEE
Q psy14906 443 SGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS-IK-LDNGISFFRTHQESSMLAVC 520 (583)
Q Consensus 443 ~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~ 520 (583)
+++... +.. ..+...+.+++++++++++++....+.|.+|+. ++ ..... .. ....+.++++.++|++.++.
T Consensus 175 ~g~~~~-~~~---~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g--~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 175 TGKLEE-YPL---PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TG--EISEYDIPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp TCCEEE-EEC---SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC--CEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred CCcEEE-eeC---CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CC--cEEEEECCCCCCCceEEEECCCCCEEEec
Confidence 555433 211 244567899999999987777767778999998 33 33322 11 23568899999999977766
Q ss_pred eCCceEEEEEccccceEE-eecccccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 521 LDDFTVNIIDIDTCTIIR-KLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 521 ~~dg~i~i~d~~~~~~~~-~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
..++.|..||. +++... .+......+.+++++++|++.++.. . .|..++.+
T Consensus 248 ~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 248 WGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp TTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred cCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 66789999998 454332 2333456789999999998766554 4 67777653
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=99.65 E-value=8.9e-13 Score=120.94 Aligned_cols=279 Identities=9% Similarity=-0.006 Sum_probs=186.0
Q ss_pred cCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEE
Q psy14906 110 HTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKII 187 (583)
Q Consensus 110 h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~ 187 (583)
......++ .++|+..++...++.|.+||.. ++... +... .....+..+++++++++.++...++.|.
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~---------~~~~~~~~i~~~~~g~l~v~~~~~~~v~ 86 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVP---------TPDAKVMCLIVSSLGDIWFTENGANKIG 86 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECS---------STTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECC---------CCCCcceeEEECCCCCEEEEecCCCeEE
Confidence 34455665 7888877776678999999988 55433 3221 3346789999999999888776678999
Q ss_pred EEEccCCceeE-EEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEE
Q psy14906 188 LHNILTDESLM-EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266 (583)
Q Consensus 188 iw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 266 (583)
.+|.. ++... .+......+..+++.+++. ++++...++.|..||.. ++............+..+++.+++++.++.
T Consensus 87 ~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 87 KLSKK-GGFTEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp EECTT-SCEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred EECCC-CCeEEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEe
Confidence 99987 55432 2222346789999999998 77777768899999987 554322112234578899999999977766
Q ss_pred eCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhh
Q psy14906 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRK 346 (583)
Q Consensus 267 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 346 (583)
..++.|..++. .+.... .....+...+..+++.+ ++...++....+.|.+||. ++.....
T Consensus 164 ~~~~~i~~~~~---~g~~~~-~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~-------------- 223 (300)
T 2qc5_A 164 NQNNSIGRITN---TGKLEE-YPLPTNAAAPVGITSGN-DGALWFVEIMGNKIGRITT-TGEISEY-------------- 223 (300)
T ss_dssp TTTTEEEEECT---TCCEEE-EECSSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEE--------------
T ss_pred cCCCeEEEECC---CCcEEE-eeCCCCCCCcceEEECC-CCCEEEEccCCCEEEEEcC-CCcEEEE--------------
Confidence 66788888854 222221 22233445678899986 6766666666678888887 3221110
Q ss_pred cchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcE
Q psy14906 347 NRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNF 426 (583)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 426 (583)
... .....+.+++++++|++
T Consensus 224 --------------------------------------------~~~----------------~~~~~~~~i~~d~~g~l 243 (300)
T 2qc5_A 224 --------------------------------------------DIP----------------TPNARPHAITAGKNSEI 243 (300)
T ss_dssp --------------------------------------------ECS----------------STTCCEEEEEECSTTCE
T ss_pred --------------------------------------------ECC----------------CCCCCceEEEECCCCCE
Confidence 000 00145788999999987
Q ss_pred EEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEcc
Q psy14906 427 VLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFK 489 (583)
Q Consensus 427 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 489 (583)
.++...++.|..|+. ++... .+.. ......+.+++++++|+++++.. . .|..+|.+
T Consensus 244 ~v~~~~~~~i~~~~~-~g~~~-~~~~---~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 244 WFTEWGANQIGRITN-DNTIQ-EYQL---QTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp EEEETTTTEEEEECT-TSCEE-EEEC---CSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred EEeccCCCeEEEECC-CCcEE-EEEC---CccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 776666789999998 44433 2211 23455688999999998766655 4 67666653
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=99.65 E-value=5.1e-14 Score=145.99 Aligned_cols=283 Identities=10% Similarity=0.063 Sum_probs=172.7
Q ss_pred EccCCCEEEEEeCCC---cEEEEEcC-----CCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC-----
Q psy14906 117 ILPFGPHLISVDEES---NVKVWDIK-----AEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN----- 183 (583)
Q Consensus 117 is~~~~~l~s~~~dg---~i~iwd~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----- 183 (583)
.+|+|++++....++ .-.+|... .++...-+... ... .++...+..++|||||++||.+..+
T Consensus 114 p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~--~l~---~~~~~~~~~~~~SPDG~~la~~~~~~G~e~ 188 (741)
T 1yr2_A 114 PQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPN--TWA---KDGATALDAWAASDDGRLLAYSVQDGGSDW 188 (741)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGG--GCC-------EEEEEEEECTTSSEEEEEEEETTCSE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHH--Hhc---cCCCEEEEeEEECCCCCEEEEEEcCCCCce
Confidence 379999988765443 24555543 33322222111 000 0333478899999999999987654
Q ss_pred CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCc--------------EEEEeCCCCee----hhhhhh
Q psy14906 184 KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGH--------------LTVWNLEDRQV----ENQIKK 245 (583)
Q Consensus 184 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~--------------i~vwd~~~~~~----~~~~~~ 245 (583)
..|++||+.+++.+... .+...+..++|+|| + .|+.++.++. |++|++.+++. +... .
T Consensus 189 ~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~-~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~-~ 264 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-D-ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFAT-P 264 (741)
T ss_dssp EEEEEEETTTCCEEEEE-EEEEESCCCEESTT-S-EEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECC-T
T ss_pred EEEEEEECCCCCCCCcc-CCCceeccEEEECC-C-EEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEecc-C
Confidence 46999999999876542 22223467899999 7 5655555443 89999977652 2222 2
Q ss_pred ccccceEEEEEecCCCEEEEEeCCC-----eEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC----
Q psy14906 246 AHRKVVTGAHFLYNEPLLVTSSPDN-----TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD---- 316 (583)
Q Consensus 246 ~~~~~v~~~~~~~~~~~l~s~~~d~-----~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---- 316 (583)
.+...+..+.|+|||++|+..+.++ .|.+|+++.. .......+..+...+.... +| +++.|+..+.+
T Consensus 265 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~--~~~~~~~l~~~~~~~~~~~-~~-dg~~l~~~s~~~~~~ 340 (741)
T 1yr2_A 265 ELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG--KIGPVTALIPDLKAQWDFV-DG-VGDQLWFVSGDGAPL 340 (741)
T ss_dssp TCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT--EECCCEEEECSSSSCEEEE-EE-ETTEEEEEECTTCTT
T ss_pred CCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC--CCcccEEecCCCCceEEEE-ec-cCCEEEEEECCCCCC
Confidence 2334588999999999888777543 7888876532 1121334444444555553 45 67777777653
Q ss_pred CcEEEEEccccc-cceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcc
Q psy14906 317 STLRIFNTKSET-SNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKS 395 (583)
Q Consensus 317 g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 395 (583)
+.|.+||+.++. ..+.+.
T Consensus 341 ~~l~~~d~~~~~~~~~~l~------------------------------------------------------------- 359 (741)
T 1yr2_A 341 KKIVRVDLSGSTPRFDTVV------------------------------------------------------------- 359 (741)
T ss_dssp CEEEEEECSSSSCEEEEEE-------------------------------------------------------------
T ss_pred CEEEEEeCCCCccccEEEe-------------------------------------------------------------
Confidence 448888876531 111110
Q ss_pred cccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcc-cCccccccCCCCCCCcccCeeEEEEeCCCcEE
Q psy14906 396 KMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQ-SGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIV 474 (583)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 474 (583)
..+...+..++++ ++.++++...++..++|.+. ++.....+. ..+.+.+..+.++|+++.|
T Consensus 360 -------------~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~----~~~~~~v~~~~~s~d~~~l 421 (741)
T 1yr2_A 360 -------------PESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVS----LPGIGSASGLSGRPGDRHA 421 (741)
T ss_dssp -------------CCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECB----CSSSCEEEEEECCBTCSCE
T ss_pred -------------cCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeecc----CCCCeEEEEeecCCCCCEE
Confidence 0000224455666 56677888888877776554 455444442 1246678899999998766
Q ss_pred EE----eecCCcEEEEEccCC
Q psy14906 475 IS----GGNDQTVKVWHFKQT 491 (583)
Q Consensus 475 ~s----~~~dg~i~iwd~~~~ 491 (583)
+. ....++|++||+.++
T Consensus 422 ~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 422 YLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EEEEEETTEEEEEEEEETTTT
T ss_pred EEEEcCCCCCCEEEEEECCCC
Confidence 52 234578999999876
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=3.4e-10 Score=118.45 Aligned_cols=439 Identities=12% Similarity=0.031 Sum_probs=261.1
Q ss_pred CCCceEEEEeeCCeEEEEecCCcEEEeecCCCC-CC-eEEEEe--eCeEEEEEcCCeEEEEeccceeeeee--cccCccE
Q psy14906 41 RRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHE-DD-ITCLSS--DFFHIYTSANNIIYAWRRGIDIVGTY--KGHTSPV 114 (583)
Q Consensus 41 ~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~-~~-v~~~~~--~~~~~~~~~~~~i~vw~~~~~~~~~~--~~h~~~v 114 (583)
+.+..+.+.+. +-+..||.++++......++. .. |.++.. ++++.++..++.|..|+........+ ..+...|
T Consensus 139 d~~g~lwi~t~-~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i 217 (795)
T 4a2l_A 139 ISPEQLLISTP-EGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQI 217 (795)
T ss_dssp EETTEEEEEET-TEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC----CCCE
T ss_pred CCCCCEEEEEC-CceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCCCCCee
Confidence 33444444433 668899988876654333221 23 777776 46777777666788898654333332 1235668
Q ss_pred EEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccC-CceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEc
Q psy14906 115 HLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDN-DTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNI 191 (583)
Q Consensus 115 ~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~ 191 (583)
.++ .++|.+ ..++.++-|.+||..+++...... .. ... .-....|.++...++|.+.+ |+.+ -|.+||.
T Consensus 218 ~~i~~d~~g~l-wigt~~~Gl~~~~~~~~~~~~~~~-~~~~~~----~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~ 289 (795)
T 4a2l_A 218 QAILQQSPTRI-WVATEGAGLFLINPKTKEIKNYLH-SPSNPK----SISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHE 289 (795)
T ss_dssp EEEEEEETTEE-EEEEBSSCEEEEETTTTEEEEECC-CTTCTT----SCSCSBEEEEEECTTSCEEE-EESS-CEEEEET
T ss_pred EEEEEcCCCCE-EEEECCCCeEEEeCCCCeEEEeec-CCCCcc----ccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcC
Confidence 887 455554 444545459999988765443221 10 000 01246799999998887665 4455 5889998
Q ss_pred cCCceeEEEe-------ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhh--h---hccccceEEEEEecC
Q psy14906 192 LTDESLMEFI-------QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI--K---KAHRKVVTGAHFLYN 259 (583)
Q Consensus 192 ~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~--~---~~~~~~v~~~~~~~~ 259 (583)
.+++...... .....|.++...++|. |-.|+.++-|..|+..++....-. . .-....|.++...++
T Consensus 290 ~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~ 367 (795)
T 4a2l_A 290 GTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG--MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKD 367 (795)
T ss_dssp TTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC--EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTT
T ss_pred CCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC--EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCC
Confidence 7665433221 1235799999999987 666777778999987654321110 0 012456899998888
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCCceeeEEe------ccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceee
Q psy14906 260 EPLLVTSSPDNTLKLWIFDKADGNGRLLRIR------EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 260 ~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 333 (583)
|++ ..|+.++-+..|+. ..+........ ......|.++...+ ++..|..|+.++-+..+|..+++.....
T Consensus 368 g~l-WiGt~~~Gl~~~~~--~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~~~~~~ 443 (795)
T 4a2l_A 368 KNL-WIGTNDGGLNLYNP--ITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIGTHAGGLSILHRNSGQVENFN 443 (795)
T ss_dssp SCE-EEEESSSCEEEECT--TTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEEETTTEEEEEETTTCCEEEEC
T ss_pred CCE-EEEECCCCeEEEcC--CCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEEeCcCceeEEeCCCCcEEEee
Confidence 874 45666666888843 22221111100 01235677887764 5654777887778999998765422110
Q ss_pred ccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCC
Q psy14906 334 GIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQS 413 (583)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (583)
... ......
T Consensus 444 ----------------------------------------------------------~~~-------------~~l~~~ 452 (795)
T 4a2l_A 444 ----------------------------------------------------------QRN-------------SQLVNE 452 (795)
T ss_dssp ----------------------------------------------------------TTT-------------SCCSCS
T ss_pred ----------------------------------------------------------cCC-------------CCcCCC
Confidence 000 000114
Q ss_pred CceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCC-CCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCC
Q psy14906 414 KPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHD-NQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG 492 (583)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 492 (583)
.|.++...++|++.+.. .+| +.+||..+++........ ........|.++...+++++.+... +-|..||..+.
T Consensus 453 ~v~~i~~d~~g~lwigt-~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~- 527 (795)
T 4a2l_A 453 NVYAILPDGEGNLWLGT-LSA-LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGL- 527 (795)
T ss_dssp CEEEEEECSSSCEEEEE-SSC-EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETT-
T ss_pred eeEEEEECCCCCEEEEe-cCc-eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCC-
Confidence 57888888888765554 444 889998776543322100 0011346799999999998666544 45888988765
Q ss_pred CCceEEee--------ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEee--cc-cccceeeEEecCCCcEEEE
Q psy14906 493 KPPLRSIK--------LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKL--SG-HMGQLTDADFSPDSRWLIT 561 (583)
Q Consensus 493 ~~~~~~~~--------~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~-h~~~v~~l~~s~d~~~l~s 561 (583)
.. .+. ....|.++...++|.+.+.. .. -+..||.++++...-- .+ ....|.++...++|++.++
T Consensus 528 -~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~ 602 (795)
T 4a2l_A 528 -DI--QKASILPVSNVTKLFTNCIYEASNGIIWVGT-RE-GFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLS 602 (795)
T ss_dssp -EE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEE-SS-CEEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEE
T ss_pred -eE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEe-CC-CceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEE
Confidence 33 221 12468888888888866544 34 5888998766543211 11 1346888999888987665
Q ss_pred EeCCCeEEEEeCCCcc
Q psy14906 562 ASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 562 ~~~d~~i~vw~~~~~~ 577 (583)
+ .. -|..|+..+++
T Consensus 603 t-~~-Gl~~~~~~~~~ 616 (795)
T 4a2l_A 603 T-NR-GISCFNPETEK 616 (795)
T ss_dssp E-TT-EEEEEETTTTE
T ss_pred c-CC-ceEEEcCCCCc
Confidence 5 33 46777776554
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.59 E-value=9.4e-13 Score=121.69 Aligned_cols=243 Identities=11% Similarity=0.101 Sum_probs=161.7
Q ss_pred cceEEEEEecCCCEEEE-------EeCCCeEEEEEccCCCCCceeeEE--eccCCCCCeeEEEeeCC-CCEEEEeeCCCc
Q psy14906 249 KVVTGAHFLYNEPLLVT-------SSPDNTLKLWIFDKADGNGRLLRI--REGHSAPPNYIQFYGNS-SDNILSAAGDST 318 (583)
Q Consensus 249 ~~v~~~~~~~~~~~l~s-------~~~d~~i~~w~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~ 318 (583)
....+++|+++++++++ ...++.|..|+.. ++....+.. ..++...+..+++++ + ++ |+.++..+.
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~--~g~~~~~~~~~~~~~~~~~~~i~~~~-~~g~-l~v~~~~~~ 93 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLK--TGKKTVICKPEVNGYGGIPAGCQCDR-DANQ-LFVADMRLG 93 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTT--TCCEEEEECCEETTEECCEEEEEECS-SSSE-EEEEETTTE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCC--CCcEEEEEecccCCCCCCCceEEEec-CCCc-EEEEECCCC
Confidence 35578999999988887 5678889999542 222221111 012445688999986 5 54 444444457
Q ss_pred EEEEEcccccccee-eccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccc
Q psy14906 319 LRIFNTKSETSNKN-LGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKM 397 (583)
Q Consensus 319 i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 397 (583)
|.+||.. ++.... ....
T Consensus 94 l~~~d~~-g~~~~~~~~~~------------------------------------------------------------- 111 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDS------------------------------------------------------------- 111 (314)
T ss_dssp EEEEETT-SCEEECCSBCT-------------------------------------------------------------
T ss_pred EEEEeCC-CCEEEEEeccC-------------------------------------------------------------
Confidence 8889876 432111 0000
Q ss_pred cceeeecccccccCCCCceEEEEccCCcEEEEEecC---------------ceEEEEEcccCccccccCCCCCCCcccCe
Q psy14906 398 DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS---------------GHVDRFNIQSGAHRGSYGHDNQPGHVGGV 462 (583)
Q Consensus 398 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---------------g~i~i~d~~~~~~~~~~~~~~~~~h~~~v 462 (583)
.......+..++++++|++.++...+ +.|..|+.. ++..... .+....
T Consensus 112 ----------~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~------~~~~~~ 174 (314)
T 1pjx_A 112 ----------EGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD------TAFQFP 174 (314)
T ss_dssp ----------TSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE------EEESSE
T ss_pred ----------CCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec------cCCCCc
Confidence 00001357889999999887776654 578888765 4433222 344557
Q ss_pred eEEEEe----CCCcEEEEe-ecCCcEEEEEccCCCCCc-----eEEeecc--CCeeeEEeccCCcEEEEEeCCceEEEEE
Q psy14906 463 RGVVSD----NLNQIVISG-GNDQTVKVWHFKQTGKPP-----LRSIKLD--NGISFFRTHQESSMLAVCLDDFTVNIID 530 (583)
Q Consensus 463 ~~~~~s----~~~~~l~s~-~~dg~i~iwd~~~~~~~~-----~~~~~~~--~~v~~~~~s~~~~~l~~~~~dg~i~i~d 530 (583)
..++++ |+++.|+.+ ..++.|.+|++.... .. ...+... ..+..++++++|+++++...++.|.+||
T Consensus 175 ~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g-~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d 253 (314)
T 1pjx_A 175 NGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPA-KIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFG 253 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETT-EEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEEC
T ss_pred ceEEEecccCCCCCEEEEEECCCCeEEEEECCCCC-ccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEc
Confidence 889999 999765444 567899999987321 21 1122212 4578899999999888888889999999
Q ss_pred ccccceEEeecccccceeeEEecCCCcEE-EEEeCCCeEEEEeCCC
Q psy14906 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWL-ITASMDCTIRVWDIPS 575 (583)
Q Consensus 531 ~~~~~~~~~~~~h~~~v~~l~~s~d~~~l-~s~~~d~~i~vw~~~~ 575 (583)
.++++.+..+..+...+.+++|++++++| ++...++.|..|++..
T Consensus 254 ~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 254 PDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp TTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 98788777777677789999999999955 4555668899999875
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.58 E-value=1.5e-12 Score=132.06 Aligned_cols=324 Identities=9% Similarity=0.044 Sum_probs=201.3
Q ss_pred CCEEEEEecCCeEEEEEccCCceeEEEeccCCC-----------eEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhh
Q psy14906 174 VDIIGVGLSNKKIILHNILTDESLMEFIQTWGP-----------VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242 (583)
Q Consensus 174 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 242 (583)
+..|.+++.++.|.-+|..+|+.+.++...... ...+++ ++. .++.++.|+.|..+|..+|+.+..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~-~v~v~~~dg~l~alD~~tG~~~W~ 153 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKG-KVYVGAWDGRLIALDAATGKEVWH 153 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETT-EEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECC-EEEEEcCCCEEEEEECCCCCEEee
Confidence 567777788899999999999999988754210 122333 233 688888999999999999998876
Q ss_pred hhhcc-c----cceEEEEEecCCCEEEEEeC------CCeEEEEEccCCCCCceeeEEeccCCC----------------
Q psy14906 243 IKKAH-R----KVVTGAHFLYNEPLLVTSSP------DNTLKLWIFDKADGNGRLLRIREGHSA---------------- 295 (583)
Q Consensus 243 ~~~~~-~----~~v~~~~~~~~~~~l~s~~~------d~~i~~w~~~~~~~~~~~~~~~~~~~~---------------- 295 (583)
+. .+ . ..+.+--...++ .++.++. ++.|..+|.. +++.+-.+.....
T Consensus 154 ~~-~~~~~~~~~~~~~~p~v~~~-~v~v~~~~~~~~~~g~v~a~D~~----tG~~~W~~~~~~~~~~~~~~~~~~~~g~~ 227 (677)
T 1kb0_A 154 QN-TFEGQKGSLTITGAPRVFKG-KVIIGNGGAEYGVRGYITAYDAE----TGERKWRWFSVPGDPSKPFEDESMKRAAR 227 (677)
T ss_dssp EE-TTTTCCSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETT----TCCEEEEEESSCCCTTSCCSSHHHHHHHT
T ss_pred ec-CCcCcCcCcccccCcEEECC-EEEEEecccccCCCCEEEEEECC----CCcEEEEeccCCCCccccccccccccccc
Confidence 62 22 1 112111111234 4444442 6888888554 3444433322111
Q ss_pred ----------------CCeeEEEeeCCCCEEEEeeCCCc-------------------EEEEEccccccceeeccchhhh
Q psy14906 296 ----------------PPNYIQFYGNSSDNILSAAGDST-------------------LRIFNTKSETSNKNLGIASANR 340 (583)
Q Consensus 296 ----------------~v~~~~~~~~~~~~l~~~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~~~ 340 (583)
....+++.| ++..++.+..++. |..+|..+++.
T Consensus 228 ~w~~~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~----------- 295 (677)
T 1kb0_A 228 TWDPSGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKY----------- 295 (677)
T ss_dssp TSCGGGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE-----------
T ss_pred cccccCceeEeCCCcccccceeEcC-CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCE-----------
Confidence 113567776 5667777766543 33333333322
Q ss_pred hhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEE
Q psy14906 341 NNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYI 420 (583)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 420 (583)
+|........ ............+..
T Consensus 296 ------------------------------------------------~W~~~~~~~d-------~wd~~~~~~p~l~~~ 320 (677)
T 1kb0_A 296 ------------------------------------------------KWHYQETPGD-------NWDYTSTQPMILADI 320 (677)
T ss_dssp ------------------------------------------------EEEEESSTTC-------CSCCCCCSCCEEEEE
T ss_pred ------------------------------------------------EEEEecCCCc-------ccccccCCCcEEEec
Confidence 2222110000 000000022334444
Q ss_pred ccCC---cEEEEEecCceEEEEEcccCccccccCCCCCC------CcccCe------------------------eEEEE
Q psy14906 421 THCG---NFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQP------GHVGGV------------------------RGVVS 467 (583)
Q Consensus 421 s~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~------~h~~~v------------------------~~~~~ 467 (583)
..+| +.++.++.+|.++++|..+|+.+..+...... .....+ ..+++
T Consensus 321 ~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~ 400 (677)
T 1kb0_A 321 KIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSF 400 (677)
T ss_dssp EETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEE
T ss_pred ccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceE
Confidence 4577 68899999999999999999987654321000 000001 25788
Q ss_pred eCCCcEEEEeec-------------------------------------------CCcEEEEEccCCCCCceEEeeccCC
Q psy14906 468 DNLNQIVISGGN-------------------------------------------DQTVKVWHFKQTGKPPLRSIKLDNG 504 (583)
Q Consensus 468 s~~~~~l~s~~~-------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~~~ 504 (583)
+|+..+++.... .|.|..||+.++ +.+..+....+
T Consensus 401 dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG--~~~W~~~~~~~ 478 (677)
T 1kb0_A 401 NPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ--KAAWSVEHVSP 478 (677)
T ss_dssp ETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT--EEEEEEEESSS
T ss_pred cCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC--cEEeecCCCCC
Confidence 998887776543 278999999998 88888887777
Q ss_pred eeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccc-cceeeEEecCCCcEEE-EEeC----------------CC
Q psy14906 505 ISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM-GQLTDADFSPDSRWLI-TASM----------------DC 566 (583)
Q Consensus 505 v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~-~~v~~l~~s~d~~~l~-s~~~----------------d~ 566 (583)
+....++.++.++++++.||.+++||.++++.+..+.... ..-.-+.|..+|+.++ ..+. .+
T Consensus 479 ~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~ 558 (677)
T 1kb0_A 479 WNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPG 558 (677)
T ss_dssp CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCC
T ss_pred CcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCC
Confidence 7777788888999999999999999999999998887443 2334466778887544 3222 36
Q ss_pred eEEEEeCCC
Q psy14906 567 TIRVWDIPS 575 (583)
Q Consensus 567 ~i~vw~~~~ 575 (583)
.+.+|.+..
T Consensus 559 ~l~~f~l~~ 567 (677)
T 1kb0_A 559 TVYTFVVGG 567 (677)
T ss_dssp EEEEEEETC
T ss_pred eEEEEeccc
Confidence 788888763
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.58 E-value=2.4e-09 Score=111.86 Aligned_cols=444 Identities=9% Similarity=-0.013 Sum_probs=260.3
Q ss_pred EEeCCCce-EEEEeeCCeEEEEecCCcEEEeecC----C---CCCCeEEEEee----CeEEEEEcCCeEEEEeccceeee
Q psy14906 38 FIRRRKET-LFVTCVGKAFHVYGCNHFKLLSVSP----Q---HEDDITCLSSD----FFHIYTSANNIIYAWRRGIDIVG 105 (583)
Q Consensus 38 ~~p~~~~~-~i~~~~~~~i~v~d~~~~~~~~~~~----~---h~~~v~~~~~~----~~~~~~~~~~~i~vw~~~~~~~~ 105 (583)
...|.+.. +-+.+.++-+..||.++.+...... . ....|.++..| +.+.+++.++.|..+|.......
T Consensus 71 i~~d~~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~gl~~~~~~~~~~~ 150 (781)
T 3v9f_A 71 VYTDPVQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYLDIATGKFT 150 (781)
T ss_dssp EEECSSSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESSSCEEEEETTTTEEE
T ss_pred EEEcCCCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEEEECCCCeeEEECCCCeEE
Confidence 33466555 5555555479999998877654311 1 12368888764 45666665667888997544444
Q ss_pred eecc------cCccEEEEc--cCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEE
Q psy14906 106 TYKG------HTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDII 177 (583)
Q Consensus 106 ~~~~------h~~~v~~is--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 177 (583)
.+.. ....|.++. ++| .|..+..++-|..+|..+++...-......... .....|.++...+++.+.
T Consensus 151 ~~~~~~~~~l~~~~i~~i~~d~~g-~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~----l~~~~i~~i~~d~~g~lw 225 (781)
T 3v9f_A 151 HYNKSTVPALPSEQTWTATEAEDG-KLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNS----LPGNDVRCIYKDTNGNIW 225 (781)
T ss_dssp EESTTTCTTCSCCCEEEEEEEETT-EEEEEETTTEEEEEETTTTEEEEECC------------CCSSEEEEEECTTCCEE
T ss_pred eeccCcccCCCccceEEEEECCCC-CEEEEecCCCeEEEcCCCCceEeeecCCCCccc----CCCCceeEEEEcCCCCEE
Confidence 4421 234577773 444 455566665689999887654322110000000 124578999998888766
Q ss_pred EEEecCCeEEEEEccCCceeEEEe-------ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhh------
Q psy14906 178 GVGLSNKKIILHNILTDESLMEFI-------QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK------ 244 (583)
Q Consensus 178 ~~~~~d~~i~iw~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~------ 244 (583)
+. +.+ -+.+||..+++...... .....|.++...++|. |..|+..+-|.++|..+++......
T Consensus 226 ig-t~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~ 301 (781)
T 3v9f_A 226 IG-TSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK--LWIATELNGIMILDLQQNQFLLPEQIRFEFI 301 (781)
T ss_dssp EE-ETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE--EEEEESSSCEEEEETTCC---------CEEE
T ss_pred EE-eCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC--EEEEeCCCCeEEECCCCCeeeeeeccccccc
Confidence 64 444 58999987664432211 1235799999888886 5666665668899988765432110
Q ss_pred -------hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEe-------ccCCCCCeeEEEeeCCCCEE
Q psy14906 245 -------KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIR-------EGHSAPPNYIQFYGNSSDNI 310 (583)
Q Consensus 245 -------~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~l 310 (583)
.-....|.++...++|. |..|..++-|..++. ........... ......|.++...+ + ..|
T Consensus 302 ~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~-g~l 376 (781)
T 3v9f_A 302 REGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISN--APPTFHTWSYSPTQMNESSLSNKVVSSVCDDG-Q-GKL 376 (781)
T ss_dssp CBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECS--SCCSCEEEC----CCCSSCCSSSCEEEEEECT-T-SCE
T ss_pred cCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCC--CCCcceeeccCccccccCCCCCcceEEEEEcC-C-CCE
Confidence 11345789999888887 445665566777743 22122221110 01234577777653 3 456
Q ss_pred EEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEe
Q psy14906 311 LSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLW 390 (583)
Q Consensus 311 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 390 (583)
..|+.++-|..||..++...... .
T Consensus 377 Wigt~~~Gl~~~~~~~~~~~~~~-~------------------------------------------------------- 400 (781)
T 3v9f_A 377 WIGTDGGGINVFENGKRVAIYNK-E------------------------------------------------------- 400 (781)
T ss_dssp EEEEBSSCEEEEETTEEEEECC----------------------------------------------------------
T ss_pred EEEeCCCcEEEEECCCCeEEEcc-C-------------------------------------------------------
Confidence 67776677888887653221100 0
Q ss_pred ecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCC
Q psy14906 391 SFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNL 470 (583)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~ 470 (583)
+. ......|.++...++|++.+ |+.++.+..++..+++...... . ......|.++...++
T Consensus 401 -------------~~---~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~-~--~~~~~~v~~i~~d~~ 460 (781)
T 3v9f_A 401 -------------NR---ELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIEL-E--KNELLDVRVFYEDKN 460 (781)
T ss_dssp -------------------CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCS-T--TTCCCCEEEEEECTT
T ss_pred -------------CC---CCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEecc-C--CCCCCeEEEEEECCC
Confidence 00 00114578888887776554 6666679999987765433221 0 123567999999888
Q ss_pred CcEEEEeecCCcEEEEEccCCCCCceEEeec------cCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecc--
Q psy14906 471 NQIVISGGNDQTVKVWHFKQTGKPPLRSIKL------DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG-- 542 (583)
Q Consensus 471 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-- 542 (583)
+++.+.. . +-|..+|..+. +....... ...|.++...++|.+.+. +.++-+..||.++++.......
T Consensus 461 g~lwigt-~-~Gl~~~~~~~~--~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~~~~~~~~~ 535 (781)
T 3v9f_A 461 KKIWIGT-H-AGVFVIDLASK--KVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLVRKFNQYEG 535 (781)
T ss_dssp SEEEEEE-T-TEEEEEESSSS--SCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEEEEECTTTT
T ss_pred CCEEEEE-C-CceEEEeCCCC--eEEecccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeEEEccCCCC
Confidence 8755543 4 45888998775 33322211 246888888888876554 4434477888876654322111
Q ss_pred -cccceeeEEecCCCcEEEEEeCCCeEEEEeCCCcc
Q psy14906 543 -HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 543 -h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~ 577 (583)
....|.++...++|.+.++. .+|.+..||..+++
T Consensus 536 l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 536 FCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFD 570 (781)
T ss_dssp CSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCC
T ss_pred CCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCc
Confidence 23568899998898866644 46755888877664
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=99.57 E-value=6e-12 Score=119.41 Aligned_cols=306 Identities=11% Similarity=0.041 Sum_probs=188.8
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEE
Q psy14906 120 FGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLME 199 (583)
Q Consensus 120 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 199 (583)
++..|+.++.++.|..+|.++|+.+.+......... .......+.+. ...++..+.+++.++.|..+|.++|+.+..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~ 128 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGW--FSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQ 128 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---C--CSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCcccccc--ccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEE
Confidence 467788888899999999999999887764211000 00001222221 122456788888999999999999999988
Q ss_pred EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccce------EEEEEecCCCEEEEEeCCCeEE
Q psy14906 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVV------TGAHFLYNEPLLVTSSPDNTLK 273 (583)
Q Consensus 200 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v------~~~~~~~~~~~l~s~~~d~~i~ 273 (583)
.............. ++ .++.++.++.|..+|..+++.+... ... ..+ ...... +..++.+..++.+.
T Consensus 129 ~~~~~~~~~~p~~~-~~--~v~v~~~~g~l~~~d~~tG~~~W~~-~~~-~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~ 201 (376)
T 3q7m_A 129 TKVAGEALSRPVVS-DG--LVLIHTSNGQLQALNEADGAVKWTV-NLD-MPSLSLRGESAPTTA--FGAAVVGGDNGRVS 201 (376)
T ss_dssp EECSSCCCSCCEEE-TT--EEEEECTTSEEEEEETTTCCEEEEE-ECC-C-----CCCCCCEEE--TTEEEECCTTTEEE
T ss_pred EeCCCceEcCCEEE-CC--EEEEEcCCCeEEEEECCCCcEEEEE-eCC-CCceeecCCCCcEEE--CCEEEEEcCCCEEE
Confidence 77553222222222 44 6888888999999999999877665 221 111 112222 34677788889888
Q ss_pred EEEccCCCCCceeeEEeccCCC--C--------C-eeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhh
Q psy14906 274 LWIFDKADGNGRLLRIREGHSA--P--------P-NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNN 342 (583)
Q Consensus 274 ~w~~~~~~~~~~~~~~~~~~~~--~--------v-~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 342 (583)
.+|.. .++.+........ . + ..... .+..++.++.++.+..+|..+++..-.
T Consensus 202 ~~d~~----tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~v~~~~~~g~l~~~d~~tG~~~w~---------- 264 (376)
T 3q7m_A 202 AVLME----QGQMIWQQRISQATGSTEIDRLSDVDTTPVV---VNGVVFALAYNGNLTALDLRSGQIMWK---------- 264 (376)
T ss_dssp EEETT----TCCEEEEEECCC-----------CCCCCCEE---ETTEEEEECTTSCEEEEETTTCCEEEE----------
T ss_pred EEECC----CCcEEEEEecccCCCCcccccccccCCCcEE---ECCEEEEEecCcEEEEEECCCCcEEee----------
Confidence 88553 2333333221110 0 1 11112 245777888889999999887754322
Q ss_pred hhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc
Q psy14906 343 LKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH 422 (583)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 422 (583)
... .....+. .
T Consensus 265 -------------------------------------------------~~~------------------~~~~~~~--~ 275 (376)
T 3q7m_A 265 -------------------------------------------------REL------------------GSVNDFI--V 275 (376)
T ss_dssp -------------------------------------------------ECC------------------CCEEEEE--E
T ss_pred -------------------------------------------------ccC------------------CCCCCce--E
Confidence 110 1111222 2
Q ss_pred CCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeec-
Q psy14906 423 CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL- 501 (583)
Q Consensus 423 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~- 501 (583)
++..+++++.++.+..+|..+++....... .....+..... .+..|+.++.+|.|.++|..++ +.+.....
T Consensus 276 ~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~----~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG--~~~~~~~~~ 347 (376)
T 3q7m_A 276 DGNRIYLVDQNDRVMALTIDGGVTLWTQSD----LLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDG--RFVAQQKVD 347 (376)
T ss_dssp ETTEEEEEETTCCEEEEETTTCCEEEEECT----TTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTC--CEEEEEECC
T ss_pred ECCEEEEEcCCCeEEEEECCCCcEEEeecc----cCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCC--cEEEEEecC
Confidence 466788888899999999999988766531 11222223333 2456888888999999999998 77776665
Q ss_pred cCCeeeEEeccCCcEEEEEeCCceEEEEE
Q psy14906 502 DNGISFFRTHQESSMLAVCLDDFTVNIID 530 (583)
Q Consensus 502 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~d 530 (583)
...+...... .+..|++++.+|.|+.|+
T Consensus 348 ~~~~~~~~~~-~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 348 SSGFQTEPVA-ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TTCBCSCCEE-ETTEEEEEBTTSCEEEEE
T ss_pred CCcceeCCEE-ECCEEEEEeCCCEEEEEe
Confidence 2333322112 355778889999999887
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=99.57 E-value=2.9e-13 Score=125.01 Aligned_cols=268 Identities=9% Similarity=-0.050 Sum_probs=171.7
Q ss_pred EEEEEcCCC----cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEe----------CCCeEEEEEccCCCCCc
Q psy14906 219 MMVSGSNTG----HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS----------PDNTLKLWIFDKADGNG 284 (583)
Q Consensus 219 ~l~s~~~dg----~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~----------~d~~i~~w~~~~~~~~~ 284 (583)
.+++...++ +|.++|..+++.+.++..+. .+ .+.++||+++++++. .++.|.+||.. ..
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~----T~ 106 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPV----TF 106 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTT----TC
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECC----CC
Confidence 444444444 78899999999999985444 34 799999999888886 36889999654 45
Q ss_pred eeeEEeccC-------CCCCeeEEEeeCCCCEEEEeeC--CCcEEE--EEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 285 RLLRIREGH-------SAPPNYIQFYGNSSDNILSAAG--DSTLRI--FNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 285 ~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
+.+..+... ......+.++| |+++++.+.. +..+.+ +|+.+ ...+...
T Consensus 107 ~vv~~I~v~~~~~~~~g~~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~----------------- 165 (368)
T 1mda_H 107 LPIADIELPDAPRFSVGPRVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA----------------- 165 (368)
T ss_dssp CEEEEEEETTSCSCCBSCCTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-----------------
T ss_pred CEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-----------------
Confidence 556665432 13467899997 8989888864 356888 88765 2221000
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCC-cEEEEEec
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCG-NFVLIGYS 432 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~ 432 (583)
. +..+.|++ +.+++.+.
T Consensus 166 ------------------------------------------------------------~--~~~~~p~g~~~~~~~~~ 183 (368)
T 1mda_H 166 ------------------------------------------------------------S--CFHIHPGAAATHYLGSC 183 (368)
T ss_dssp ------------------------------------------------------------S--CCCCEEEETTEEECCCC
T ss_pred ------------------------------------------------------------C--ceEEccCCCeEEEEEcC
Confidence 0 01122333 22333445
Q ss_pred CceEEEEEccc-----CccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeec------
Q psy14906 433 SGHVDRFNIQS-----GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL------ 501 (583)
Q Consensus 433 dg~i~i~d~~~-----~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------ 501 (583)
||.+.+.++.+ ++...... ........+. + .+++..++..+. +.+.+.|......+.+..+..
T Consensus 184 dg~~~~vd~~~~~~~~~~v~~~~t-~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~ 257 (368)
T 1mda_H 184 PASLAASDLAAAPAAAGIVGAQCT-GAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRK 257 (368)
T ss_dssp TTSCEEEECCSSCCCCEECCCCSC-TTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHH
T ss_pred CCCEEEEECccccccCCeEEEEee-eeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccc
Confidence 66666666665 33221100 0001122233 3 666666666666 899999987542122222211
Q ss_pred -----cCCeeeEEeccCCcEEEEEeC---------CceEEEEEccccceEEeecccccceeeEEecCCCcE-EEEEe-CC
Q psy14906 502 -----DNGISFFRTHQESSMLAVCLD---------DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW-LITAS-MD 565 (583)
Q Consensus 502 -----~~~v~~~~~s~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~-l~s~~-~d 565 (583)
......++++||++.++++.. ++.+.++|+.+++.+..+.... ....++|+|||++ +++.. .+
T Consensus 258 ~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~ 336 (368)
T 1mda_H 258 ADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGT 336 (368)
T ss_dssp HTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTT
T ss_pred ccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCC
Confidence 112233789999998887643 2456799999999998887543 6899999999984 56666 59
Q ss_pred CeEEEEeCCCcccccccC
Q psy14906 566 CTIRVWDIPSSQLIDCFQ 583 (583)
Q Consensus 566 ~~i~vw~~~~~~~~~~~~ 583 (583)
+.|.++|+.+++.+++++
T Consensus 337 ~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 337 EVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp TEEEEEESSSCEEEEECC
T ss_pred CeEEEEECCCCcEEEEEE
Confidence 999999999999988763
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.57 E-value=1.2e-12 Score=133.15 Aligned_cols=311 Identities=9% Similarity=0.054 Sum_probs=188.6
Q ss_pred CCEEEEEecCCeEEEEEccCCceeEEEeccCCC----------e-EEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhh
Q psy14906 174 VDIIGVGLSNKKIILHNILTDESLMEFIQTWGP----------V-TALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242 (583)
Q Consensus 174 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 242 (583)
+..|.+++.++.|..+|..+|+.+.++...... + ..+.. ++. .++.++.|+.|..+|..+|+.+..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g-~v~v~~~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKG-KVYVGVLDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETT-EEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECC-EEEEEccCCEEEEEECCCCCEeee
Confidence 667777888899999999999999998644221 1 11222 233 688888999999999999998766
Q ss_pred hhhc-ccc---ceEEEEEecCCCEEEEEe-----CCCeEEEEEccCCCCCceeeEEecc---------------------
Q psy14906 243 IKKA-HRK---VVTGAHFLYNEPLLVTSS-----PDNTLKLWIFDKADGNGRLLRIREG--------------------- 292 (583)
Q Consensus 243 ~~~~-~~~---~v~~~~~~~~~~~l~s~~-----~d~~i~~w~~~~~~~~~~~~~~~~~--------------------- 292 (583)
.... +.. .+.+--...++..++..+ .++.|..||.. +++.+-.+..
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~----tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 222 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAE----TGKEAWRFYTVPGDPKLPPEGKGMEIAAKTW 222 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETT----TCCEEEEEESSCCCTTSCCCSHHHHHHHTTC
T ss_pred ecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECC----CCcEEEEecccCCCccccccccccccccccc
Confidence 6222 111 111100111454443322 36888888554 3344433321
Q ss_pred ----------CCCCCeeEEEeeCCCCEEEEeeCCCc-------------------EEEEEccccccceeeccchhhhhhh
Q psy14906 293 ----------HSAPPNYIQFYGNSSDNILSAAGDST-------------------LRIFNTKSETSNKNLGIASANRNNL 343 (583)
Q Consensus 293 ----------~~~~v~~~~~~~~~~~~l~~~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~~~~~~ 343 (583)
+......+++.| +..+++.+..++. |..+|..+++.
T Consensus 223 ~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~-------------- 287 (689)
T 1yiq_A 223 FGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEY-------------- 287 (689)
T ss_dssp CSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCE--------------
T ss_pred CCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCce--------------
Confidence 011112567776 5677887777654 33333333322
Q ss_pred hhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC
Q psy14906 344 KRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC 423 (583)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 423 (583)
+|........ .........+.......+
T Consensus 288 ---------------------------------------------~W~~~~~~~d-------~wd~~~~~~~~l~d~~~~ 315 (689)
T 1yiq_A 288 ---------------------------------------------VWHYQTTPGD-------AWDYTATQHMILAELPID 315 (689)
T ss_dssp ---------------------------------------------EEEEESSTTC-------CSCCCCCSCEEEEEEEET
T ss_pred ---------------------------------------------eEeeecCCcc-------cccccCCCCcEEEeeccC
Confidence 1222110000 000000011222223335
Q ss_pred Cc---EEEEEecCceEEEEEcccCccccccCCCCC-----------------------CCcc-----------cCeeEEE
Q psy14906 424 GN---FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQ-----------------------PGHV-----------GGVRGVV 466 (583)
Q Consensus 424 ~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----------------------~~h~-----------~~v~~~~ 466 (583)
|+ .++.++.+|.++++|..+|+.+........ .... ..-..++
T Consensus 316 G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a 395 (689)
T 1yiq_A 316 GKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMS 395 (689)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCE
T ss_pred CcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcce
Confidence 64 788899999999999999998643211100 0000 0112378
Q ss_pred EeCCCcEEEEeec---------------------------------------------CCcEEEEEccCCCCCceEEeec
Q psy14906 467 SDNLNQIVISGGN---------------------------------------------DQTVKVWHFKQTGKPPLRSIKL 501 (583)
Q Consensus 467 ~s~~~~~l~s~~~---------------------------------------------dg~i~iwd~~~~~~~~~~~~~~ 501 (583)
++|+..+++.... +|.|+.||+.++ +.+.....
T Consensus 396 ~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG--~~~W~~~~ 473 (689)
T 1yiq_A 396 YNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ--QAAWEVPY 473 (689)
T ss_dssp EETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT--EEEEEEEE
T ss_pred ECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC--CeEeEccC
Confidence 8998877776422 377999999999 88888887
Q ss_pred cCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccc-eeeEEecCCCcEEE
Q psy14906 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ-LTDADFSPDSRWLI 560 (583)
Q Consensus 502 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~-v~~l~~s~d~~~l~ 560 (583)
..+...-.++..+.++++++.||.++.||.++|+.+.+++...+. -.-+.|..||+..+
T Consensus 474 ~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 474 VTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEE
Confidence 776666677778899999999999999999999999888754332 24567788887543
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=99.56 E-value=3.8e-13 Score=124.29 Aligned_cols=278 Identities=6% Similarity=-0.054 Sum_probs=180.3
Q ss_pred eEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEc---------CCCcEEEEeCCCCeehhhhhhcc------cc
Q psy14906 185 KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS---------NTGHLTVWNLEDRQVENQIKKAH------RK 249 (583)
Q Consensus 185 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---------~dg~i~vwd~~~~~~~~~~~~~~------~~ 249 (583)
.|.++|..+++.+.++.....+ .+.++||+++++++.. .++.|.+||+.+++.+.++..+. ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8889999999999999866566 7999999995444431 46889999999999988873220 12
Q ss_pred ceEEEEEecCCCEEEEEeC--CCeEEE--EEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcc
Q psy14906 250 VVTGAHFLYNEPLLVTSSP--DNTLKL--WIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325 (583)
Q Consensus 250 ~v~~~~~~~~~~~l~s~~~--d~~i~~--w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 325 (583)
....++++|||++++++.. +..+.+ +|.. + +..+..- +. ....|.....+++.+.||.+.+.|+.
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~--t-----v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~ 193 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS--D-----DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLA 193 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTE--E-----EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECC
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchh--h-----ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECc
Confidence 4567899999999998864 467888 7442 1 3333211 11 12234334566677788888888887
Q ss_pred c-----cccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccce
Q psy14906 326 S-----ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDM 400 (583)
Q Consensus 326 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 400 (583)
+ ++...... . .++.
T Consensus 194 ~~~~~~~~v~~~~t-~----------------------------------------------------~i~v-------- 212 (368)
T 1mda_H 194 AAPAAAGIVGAQCT-G----------------------------------------------------AQNC-------- 212 (368)
T ss_dssp SSCCCCEECCCCSC-T----------------------------------------------------TSCB--------
T ss_pred cccccCCeEEEEee-e----------------------------------------------------eeeC--------
Confidence 5 22110000 0 0000
Q ss_pred eeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCc--cccccCCCC-----CCCcccCeeEEEEeCCCcE
Q psy14906 401 FLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGA--HRGSYGHDN-----QPGHVGGVRGVVSDNLNQI 473 (583)
Q Consensus 401 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~-----~~~h~~~v~~~~~s~~~~~ 473 (583)
. ..+. . .+++..++..+. +.+.+.|..++. ....+.... ..........++++|+++.
T Consensus 213 ---------g-~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~ 277 (368)
T 1mda_H 213 ---------S-SQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDG 277 (368)
T ss_dssp ---------C-SCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTE
T ss_pred ---------C-CCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCE
Confidence 0 0122 3 556666555555 889999986543 222221100 0001122223789999987
Q ss_pred EEEeec---------CCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcE-EEEEe-CCceEEEEEccccceEEeecc
Q psy14906 474 VISGGN---------DQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSM-LAVCL-DDFTVNIIDIDTCTIIRKLSG 542 (583)
Q Consensus 474 l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~-~dg~i~i~d~~~~~~~~~~~~ 542 (583)
++.+.. ++.+.++|+.+. +.+..+........++|+|||+. +++.. .++.|.++|+.+++.+.++..
T Consensus 278 lyV~~~~~~~~~~~~~~~~~ViD~~t~--~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 278 IMILTVEHSRSCLAAAENTSSVTASVG--QTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp EEEEEEECSSCTTSCEEEEEEEESSSC--CEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC
T ss_pred EEEEeccccCcccccCCCEEEEECCCC--eEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC
Confidence 776532 235669999998 88888888788999999999985 45555 489999999999999999885
Q ss_pred cccceeeEEecC
Q psy14906 543 HMGQLTDADFSP 554 (583)
Q Consensus 543 h~~~v~~l~~s~ 554 (583)
... ...+++.+
T Consensus 356 g~~-P~~i~~~~ 366 (368)
T 1mda_H 356 DKG-PESLSVQN 366 (368)
T ss_dssp CSC-CCEEECCC
T ss_pred CCC-CCEEEeec
Confidence 543 45566543
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=99.56 E-value=2e-12 Score=119.48 Aligned_cols=232 Identities=11% Similarity=-0.000 Sum_probs=157.4
Q ss_pred CcccEEEEEeCCCceEEE-------EeeCCeEEEEecCCcEEEeecC----CCCCCeEEEEe--e-CeEEEEEcCCeEEE
Q psy14906 31 HLPVVARFIRRRKETLFV-------TCVGKAFHVYGCNHFKLLSVSP----QHEDDITCLSS--D-FFHIYTSANNIIYA 96 (583)
Q Consensus 31 ~~~~~~~~~p~~~~~~i~-------~~~~~~i~v~d~~~~~~~~~~~----~h~~~v~~~~~--~-~~~~~~~~~~~i~v 96 (583)
..|..++|.|++ ..+++ ...++.|.+||.++++...... ++...+.++++ + +++.+++.++.|.+
T Consensus 18 ~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEE
T ss_pred CCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEE
Confidence 356788897554 33444 3578899999988877654332 35567888887 5 67777776678999
Q ss_pred Eeccceeeee-ecc----cCccEEEE--ccCCCEEEEEeCC---------------CcEEEEEcCCCcEEEEeeccCCce
Q psy14906 97 WRRGIDIVGT-YKG----HTSPVHLI--LPFGPHLISVDEE---------------SNVKVWDIKAEETYLELSFDNDTF 154 (583)
Q Consensus 97 w~~~~~~~~~-~~~----h~~~v~~i--s~~~~~l~s~~~d---------------g~i~iwd~~~~~~~~~~~~~~~~~ 154 (583)
||.+++.... ... ....+.++ +++|+.+++...+ +.|..||.. ++.....
T Consensus 97 ~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~------- 168 (314)
T 1pjx_A 97 VQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD------- 168 (314)
T ss_dssp EETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-------
T ss_pred EeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-------
Confidence 9987543322 221 11235555 8889877776554 567777765 5543322
Q ss_pred EEecccCCcceEEEeeC----CCCCEEEEE-ecCCeEEEEEcc-CCce-----eEEEeccC-CCeEEEEEecCCCCEEEE
Q psy14906 155 KIMGKRWNSCVNVLEPS----PVVDIIGVG-LSNKKIILHNIL-TDES-----LMEFIQTW-GPVTALSFRTDGPPMMVS 222 (583)
Q Consensus 155 ~~~~~~~~~~i~~~~~s----~~~~~l~~~-~~d~~i~iw~~~-~~~~-----~~~~~~~~-~~v~~~~~~~~~~~~l~s 222 (583)
.+......++++ |+++.|.++ ..++.|.+|+.. +++. ...+..+. ..+..++++++|. ++++
T Consensus 169 -----~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~ 242 (314)
T 1pjx_A 169 -----TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVA 242 (314)
T ss_dssp -----EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEE
T ss_pred -----cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC-EEEE
Confidence 223346788999 999766555 567899999986 4432 22333333 5688999999998 7777
Q ss_pred EcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEE-EEeCCCeEEEEEcc
Q psy14906 223 GSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV-TSSPDNTLKLWIFD 278 (583)
Q Consensus 223 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~i~~w~~~ 278 (583)
...++.|.+||.++++....+ ..+...+.+++|+++++.|+ +...++.|..|+++
T Consensus 243 ~~~~~~i~~~d~~~g~~~~~~-~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 243 NWGSSHIEVFGPDGGQPKMRI-RCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EETTTEEEEECTTCBSCSEEE-ECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred EcCCCEEEEEcCCCCcEeEEE-eCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 767889999999877766666 45557899999999999554 44556788888664
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.54 E-value=8.1e-12 Score=118.87 Aligned_cols=243 Identities=13% Similarity=0.112 Sum_probs=160.7
Q ss_pred cceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC--cEEEEEccc
Q psy14906 249 KVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS--TLRIFNTKS 326 (583)
Q Consensus 249 ~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~ 326 (583)
.....++|+++++++++...++.|+.|+.+ .......... ..... ++|+| +++.|+.+..++ .|.+++...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~----~g~~~~~~~~-~~~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVD----DNKVTTVHPG-FKGGK-PAVTK-DKQRVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETT----TTEEEEEEET-CCBCB-CEECT-TSSEEEEEBSSTTCEEEEEEGGG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECC----CCEEEEeecc-CCCCc-eeEec-CCCcEEEEecCCCceEEEEEcCC
Confidence 467889999999977777777999999654 2333333332 23334 89997 788888888765 788888765
Q ss_pred cccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccc
Q psy14906 327 ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPER 406 (583)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 406 (583)
+.....+..
T Consensus 204 ~~~~~~~g~----------------------------------------------------------------------- 212 (409)
T 3hrp_A 204 GWAPTRIGQ----------------------------------------------------------------------- 212 (409)
T ss_dssp TTCEEEEEE-----------------------------------------------------------------------
T ss_pred CceeEEeee-----------------------------------------------------------------------
Confidence 432111100
Q ss_pred ccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCe--eEEEEeCC-CcEEEEeecCCcE
Q psy14906 407 CKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGV--RGVVSDNL-NQIVISGGNDQTV 483 (583)
Q Consensus 407 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v--~~~~~s~~-~~~l~s~~~dg~i 483 (583)
........+.+++++|++..|+++..++.|+.||..++....... ....++...- ..++|+|+ +.++++-..++.|
T Consensus 213 ~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~-~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I 291 (409)
T 3hrp_A 213 LGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQ-LELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSV 291 (409)
T ss_dssp CCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEE-CCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEE
T ss_pred ccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEec-ccccCCCCCCccccEEEeCCCCEEEEEeCCCCEE
Confidence 000001456789999965556667778999999998765432200 0002222222 39999995 6666776778899
Q ss_pred EEEEccCCCCCceEEeec---------------cCCeeeEEeccCCcEEEEEe-CCceEEEEEccccceEEeeccc----
Q psy14906 484 KVWHFKQTGKPPLRSIKL---------------DNGISFFRTHQESSMLAVCL-DDFTVNIIDIDTCTIIRKLSGH---- 543 (583)
Q Consensus 484 ~iwd~~~~~~~~~~~~~~---------------~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~h---- 543 (583)
+.|+.... ....... -.....++++|+|+++++-. .++.|+.|++.+++.. .+.++
T Consensus 292 ~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~-~~~g~~~~~ 367 (409)
T 3hrp_A 292 YKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS-TVAGQVDVA 367 (409)
T ss_dssp EEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE-EEEECTTCB
T ss_pred EEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE-EEeCCCCCC
Confidence 99987643 2222111 13478899999999777777 7899999998777643 33333
Q ss_pred -----------ccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 544 -----------MGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 544 -----------~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
-.....+++++++.++++-..++.|+.++++
T Consensus 368 g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 368 SQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp SCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred CcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 2457889999999888888888889888753
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.9e-12 Score=130.25 Aligned_cols=345 Identities=11% Similarity=0.020 Sum_probs=197.6
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCC-cce-EEEeeCCCCCEEEEEecCCeEEEEEccCCcee
Q psy14906 120 FGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN-SCV-NVLEPSPVVDIIGVGLSNKKIILHNILTDESL 197 (583)
Q Consensus 120 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~i-~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~ 197 (583)
.+..|+.++.++.|.-+|..+|+.+.+.......... .... ..+ ..+++ ++..|++++.|+.|..+|.++|+.+
T Consensus 69 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~--~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~ 144 (689)
T 1yiq_A 69 VDGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRA--GEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRA 144 (689)
T ss_dssp ETTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGG--GGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred ECCEEEEEcCCCeEEEEECCCCceeEEEcCCCCcccc--ccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEe
Confidence 3667777778899999999999999888643211000 0000 000 11112 4668888999999999999999999
Q ss_pred EEEecc--CCCeEEEEEec---CCCCEEEEEc------CCCcEEEEeCCCCeehhhhhh---------------------
Q psy14906 198 MEFIQT--WGPVTALSFRT---DGPPMMVSGS------NTGHLTVWNLEDRQVENQIKK--------------------- 245 (583)
Q Consensus 198 ~~~~~~--~~~v~~~~~~~---~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~--------------------- 245 (583)
.++... ......+..+| ++. ++.++ .+|.|..||..+|+.+..+..
T Consensus 145 W~~~~~~~~~~~~~~~~sP~v~~g~--v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 222 (689)
T 1yiq_A 145 WSVDTRADHKRSYTITGAPRVVNGK--VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTW 222 (689)
T ss_dssp EEEECCSCTTSCCBCCSCCEEETTE--EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTC
T ss_pred eeecCcCCCCCCccccCCcEEECCE--EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccccc
Confidence 887642 11111111112 453 55543 368999999999987655421
Q ss_pred ---------ccccceEEEEEecCCCEEEEEeCCCe-------------------EEEEEccCCCCCceeeEEecc--CCC
Q psy14906 246 ---------AHRKVVTGAHFLYNEPLLVTSSPDNT-------------------LKLWIFDKADGNGRLLRIREG--HSA 295 (583)
Q Consensus 246 ---------~~~~~v~~~~~~~~~~~l~s~~~d~~-------------------i~~w~~~~~~~~~~~~~~~~~--~~~ 295 (583)
++......++++|++.+++.+..++. |..+|.+ +++.+-.++. |..
T Consensus 223 ~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~----TG~~~W~~~~~~~d~ 298 (689)
T 1yiq_A 223 FGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNAD----TGEYVWHYQTTPGDA 298 (689)
T ss_dssp CSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETT----TCCEEEEEESSTTCC
T ss_pred CCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEcc----CCceeEeeecCCccc
Confidence 01111135788998888888887753 7777544 3444444332 321
Q ss_pred -------CCeeEEEeeCCCC---EEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceee
Q psy14906 296 -------PPNYIQFYGNSSD---NILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFS 365 (583)
Q Consensus 296 -------~v~~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (583)
++...... .+++ .++.++.+|.++++|..+++.+.........-.. . .+.....+ ..
T Consensus 299 wd~~~~~~~~l~d~~-~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~-----~----~~~~~~~p---i~ 365 (689)
T 1yiq_A 299 WDYTATQHMILAELP-IDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTK-----G----MDMKTGRP---IL 365 (689)
T ss_dssp SCCCCCSCEEEEEEE-ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEE-----E----EETTTTEE---EE
T ss_pred ccccCCCCcEEEeec-cCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccc-----c----cCccCCCc---cc
Confidence 11111111 1454 7889999999999999999876543211100000 0 00000000 00
Q ss_pred eeccc--ccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec-----------
Q psy14906 366 FGLAR--EKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS----------- 432 (583)
Q Consensus 366 ~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----------- 432 (583)
..... ..+....+++... ... ..-..++++|+..++++...
T Consensus 366 ~~~~~~~~~~~~~~~~~p~~------------------------~Gg--~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~ 419 (689)
T 1yiq_A 366 DEENAAYWKNGKRNLVTPAF------------------------WGA--HDWQPMSYNPDTGLVYIPAHIMSAYYEHIPE 419 (689)
T ss_dssp CHHHHCTTTSSSCEEESSCT------------------------TCS--SCSSCCEEETTTTEEEEEEEECCEEEECCSS
T ss_pred chhhccccCCCCeeEeCCCc------------------------ccc--cCCCcceECCCCCEEEEeccccceeeeeccc
Confidence 00000 0000000000000 000 11233566776666665422
Q ss_pred ----------------------------------CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee
Q psy14906 433 ----------------------------------SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG 478 (583)
Q Consensus 433 ----------------------------------dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 478 (583)
+|.|..||+.+++....+. +..++..-.+...+.+++.++
T Consensus 420 ~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~------~~~~~~~g~~~tagglvf~gt 493 (689)
T 1yiq_A 420 APKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVP------YVTIFNGGTLSTAGNLVFEGS 493 (689)
T ss_dssp CCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEE------ESSSCCCCEEEETTTEEEEEC
T ss_pred cccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEcc------CCCCccCccceECCCEEEEEC
Confidence 4889999999999887762 222333345666778899999
Q ss_pred cCCcEEEEEccCCCCCceEEeeccCCe--eeEEeccCCc-EEEEEe
Q psy14906 479 NDQTVKVWHFKQTGKPPLRSIKLDNGI--SFFRTHQESS-MLAVCL 521 (583)
Q Consensus 479 ~dg~i~iwd~~~~~~~~~~~~~~~~~v--~~~~~s~~~~-~l~~~~ 521 (583)
.||.++.||.+++ +.+..++....+ .-+.|..+|+ |+++.+
T Consensus 494 ~dg~l~a~D~~tG--~~lw~~~~~~~~~~~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 494 ADGRVIAYAADTG--EKLWEQPAASGVMAAPVTYSVDGEQYVTFMA 537 (689)
T ss_dssp TTSEEEEEETTTC--CEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CCCcEEEEECCCC--ccceeeeCCCCcccCceEEEECCEEEEEEEe
Confidence 9999999999999 899888766543 3477788888 444443
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.53 E-value=3.8e-12 Score=129.18 Aligned_cols=345 Identities=11% Similarity=0.014 Sum_probs=200.2
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEE
Q psy14906 120 FGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLME 199 (583)
Q Consensus 120 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 199 (583)
.+..|+.++.++.|.-+|..+|+.+.+.....................+++ ++..|++++.|+.+..+|..+|+.+.+
T Consensus 76 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~ 153 (677)
T 1kb0_A 76 VDGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWH 153 (677)
T ss_dssp ETTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEee
Confidence 356677777789999999999999988874321100000000000011222 467888889999999999999999998
Q ss_pred Eecc-C----CCeEEEEEecCCCCEEEEEcC------CCcEEEEeCCCCeehhhhhhc----------------------
Q psy14906 200 FIQT-W----GPVTALSFRTDGPPMMVSGSN------TGHLTVWNLEDRQVENQIKKA---------------------- 246 (583)
Q Consensus 200 ~~~~-~----~~v~~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~---------------------- 246 (583)
+... . ..+.+--...++ .++.++. ++.|+.||..+|+.+..+...
T Consensus 154 ~~~~~~~~~~~~~~~~p~v~~~--~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 154 QNTFEGQKGSLTITGAPRVFKG--KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp EETTTTCCSSCBCCSCCEEETT--EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred ecCCcCcCcCcccccCcEEECC--EEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence 8754 1 112211111244 4555543 689999999999877554211
Q ss_pred ---------cccceEEEEEecCCCEEEEEeCCC-------------------eEEEEEccCCCCCceeeEEeccCC----
Q psy14906 247 ---------HRKVVTGAHFLYNEPLLVTSSPDN-------------------TLKLWIFDKADGNGRLLRIREGHS---- 294 (583)
Q Consensus 247 ---------~~~~v~~~~~~~~~~~l~s~~~d~-------------------~i~~w~~~~~~~~~~~~~~~~~~~---- 294 (583)
.......++++|++..++.+..++ .|..+ |..+++.........|.
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~Al--D~~TG~~~W~~~~~~~d~wd~ 309 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVAL--DPDTGKYKWHYQETPGDNWDY 309 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE--CTTTCCEEEEEESSTTCCSCC
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEE--ECCCCCEEEEEecCCCccccc
Confidence 111123578899988888877664 36666 54433322222222231
Q ss_pred ---CCCeeEEEeeCCC---CEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeec
Q psy14906 295 ---APPNYIQFYGNSS---DNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGL 368 (583)
Q Consensus 295 ---~~v~~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (583)
....-+.... +| ..++.++.+|.++++|..+++.+..+....... ...+
T Consensus 310 ~~~~~p~l~~~~~-dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~--------------------~~~~---- 364 (677)
T 1kb0_A 310 TSTQPMILADIKI-AGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNW--------------------ASGY---- 364 (677)
T ss_dssp CCCSCCEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSS--------------------EEEE----
T ss_pred ccCCCcEEEeccc-CCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCc--------------------cccc----
Confidence 1122223322 56 689999999999999999998765542211000 0000
Q ss_pred ccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec----------------
Q psy14906 369 AREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS---------------- 432 (583)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---------------- 432 (583)
. ..+.... +................... ..-..++++|++.++++...
T Consensus 365 ------------d-~~g~~~~-~~~~~~~~~~~~~~P~~~G~--~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~ 428 (677)
T 1kb0_A 365 ------------D-KHGKPIG-IAAARDGSKPQDAVPGPYGA--HNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQ 428 (677)
T ss_dssp ------------C-TTSCEEE-CGGGGCTTSCEECSSCTTCS--SCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTC
T ss_pred ------------C-CCCceee-ccccCcCCCccEECcCcccc--cCCCCceEcCCCCEEEEeChhcceeeeccccccccc
Confidence 0 0000000 00000000000000000000 11235677887777776543
Q ss_pred ---------------------------CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEE
Q psy14906 433 ---------------------------SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKV 485 (583)
Q Consensus 433 ---------------------------dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~i 485 (583)
.|.|..||+.+++....+ .+..++....+..++.+++.++.||.+++
T Consensus 429 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~------~~~~~~~~g~~~~~g~~v~~g~~dg~l~a 502 (677)
T 1kb0_A 429 AGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSV------EHVSPWNGGTLTTAGNVVFQGTADGRLVA 502 (677)
T ss_dssp CCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEE------EESSSCCCCEEEETTTEEEEECTTSEEEE
T ss_pred ccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeec------CCCCCCcCcceEeCCCEEEEECCCCcEEE
Confidence 278999999999988776 23344555566777888888999999999
Q ss_pred EEccCCCCCceEEeeccCCe--eeEEeccCCcEEEE
Q psy14906 486 WHFKQTGKPPLRSIKLDNGI--SFFRTHQESSMLAV 519 (583)
Q Consensus 486 wd~~~~~~~~~~~~~~~~~v--~~~~~s~~~~~l~~ 519 (583)
||..++ +.+..+.....+ .-+.|.++|+.+++
T Consensus 503 ~D~~tG--~~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 503 YHAATG--EKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp EETTTC--CEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred EECCCC--ceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 999999 898888766533 44566788874443
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.52 E-value=8.7e-09 Score=107.57 Aligned_cols=448 Identities=11% Similarity=0.057 Sum_probs=257.8
Q ss_pred EEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCC--------CCCeEEEEee--Ce-EEEEEcCCeEEEEeccceeee
Q psy14906 37 RFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQH--------EDDITCLSSD--FF-HIYTSANNIIYAWRRGIDIVG 105 (583)
Q Consensus 37 ~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h--------~~~v~~~~~~--~~-~~~~~~~~~i~vw~~~~~~~~ 105 (583)
+...|.+..+=+++.++ +..||-.+.+.... ... ...|.++..| ++ +-+++.++.+..||.......
T Consensus 23 ~I~qD~~G~lWigT~~G-L~ryDG~~f~~~~~-~~~~~~~~~l~~n~I~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~f~ 100 (781)
T 3v9f_A 23 SITQDKQGFLWFATEEG-LNKFDGTRFITYYK-EEQSSSVQSITGNELNEVYTDPVQPVIWIATQRAGLNAYNYETQSFS 100 (781)
T ss_dssp EEEECTTSCEEEEESSC-EEEECSSSEEEECC-CSSCSSSCCCSCSCEEEEEECSSSSEEEEEESSSCEEEEETTTTEEE
T ss_pred EEEECCCCCEEEccCCc-CccccCCceEEEEc-CCCCCccccccccccceEEEcCCCCEEEEEeCCCCcceECCCCCeEE
Confidence 34447777666665554 77788666554433 211 3458888875 56 777777657999997644444
Q ss_pred eecc--------cCccEEEEccC---CCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCC
Q psy14906 106 TYKG--------HTSPVHLILPF---GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVV 174 (583)
Q Consensus 106 ~~~~--------h~~~v~~is~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 174 (583)
.+.. ....|.+|..+ ...|..++.++.|..+|.++++... +...... ......|.++...+++
T Consensus 101 ~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~~~gl~~~~~~~~~~~~-~~~~~~~-----~l~~~~i~~i~~d~~g 174 (781)
T 3v9f_A 101 VYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTYYRGIEYLDIATGKFTH-YNKSTVP-----ALPSEQTWTATEAEDG 174 (781)
T ss_dssp EECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEESSSCEEEEETTTTEEEE-ESTTTCT-----TCSCCCEEEEEEEETT
T ss_pred eeccccCCCCCcccCcceEEEecCccCCCEEEEECCCCeeEEECCCCeEEe-eccCccc-----CCCccceEEEEECCCC
Confidence 4311 12368887333 2455556645668899988765432 2211000 0113468888887777
Q ss_pred CEEEEEecCCeEEEEEccCCceeEEEe-------ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhh--
Q psy14906 175 DIIGVGLSNKKIILHNILTDESLMEFI-------QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKK-- 245 (583)
Q Consensus 175 ~~l~~~~~d~~i~iw~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-- 245 (583)
.+.+ ++.++-+..||..+++...-.. .....|.++...+++. |..|+.+ -+.+||..+++.......
T Consensus 175 ~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~--lwigt~~-Gl~~~d~~~~~~~~~~~~~~ 250 (781)
T 3v9f_A 175 KLYI-GHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGN--IWIGTSK-GLALFNANTETFTNFHNNPG 250 (781)
T ss_dssp EEEE-EETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCC--EEEEETT-EEEEEETTTTEEEC------
T ss_pred CEEE-EecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCC--EEEEeCC-cHheECCCCCcEEEEEcCCC
Confidence 6555 5566568899987665432111 1125689998888887 4444545 689999887654432201
Q ss_pred ----ccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEE-------e-----ccCCCCCeeEEEeeCCCCE
Q psy14906 246 ----AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI-------R-----EGHSAPPNYIQFYGNSSDN 309 (583)
Q Consensus 246 ----~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~-------~-----~~~~~~v~~~~~~~~~~~~ 309 (583)
.....|.++...++|.+. .|...+-+.+++... ........ . ......|.++...+ ++ .
T Consensus 251 ~~~~l~~~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g-~ 325 (781)
T 3v9f_A 251 NIHGALSSYIFSIKQLKDNKLW-IATELNGIMILDLQQ--NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FN-N 325 (781)
T ss_dssp -----CCCCEEEEEECTTSEEE-EEESSSCEEEEETTC--C---------CEEECBCSSTTSBSSSCEEEEEECS-SC-C
T ss_pred ccccccCceEEEEEECCCCCEE-EEeCCCCeEEECCCC--CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CC-C
Confidence 124578999888887644 455534577775432 11111111 0 11234677777764 34 5
Q ss_pred EEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEE
Q psy14906 310 ILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSL 389 (583)
Q Consensus 310 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 389 (583)
|..|+.++-|..++.......... ..
T Consensus 326 lWigt~~~Gl~~~~~~~~~~~~~~-~~----------------------------------------------------- 351 (781)
T 3v9f_A 326 IWIGTWGGGINFISNAPPTFHTWS-YS----------------------------------------------------- 351 (781)
T ss_dssp EEEEEBSSCEEEECSSCCSCEEEC--------------------------------------------------------
T ss_pred EEEEecCCeEEEeCCCCCcceeec-cC-----------------------------------------------------
Confidence 667777777888887654321100 00
Q ss_pred eecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC
Q psy14906 390 WSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN 469 (583)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 469 (583)
... ..........|.+++..++|.+ .+|+.++.|..|+..++......... ......|.++...+
T Consensus 352 ----~~~--------~~~~~l~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~d~ 416 (781)
T 3v9f_A 352 ----PTQ--------MNESSLSNKVVSSVCDDGQGKL-WIGTDGGGINVFENGKRVAIYNKENR--ELLSNSVLCSLKDS 416 (781)
T ss_dssp ------C--------CCSSCCSSSCEEEEEECTTSCE-EEEEBSSCEEEEETTEEEEECC-------CCCSBEEEEEECT
T ss_pred ----ccc--------cccCCCCCcceEEEEEcCCCCE-EEEeCCCcEEEEECCCCeEEEccCCC--CCCCcceEEEEECC
Confidence 000 0000001145788888887764 45665666999998765433221100 23456799999988
Q ss_pred CCcEEEEeecCCcEEEEEccCCCCCceEEee----ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeeccc--
Q psy14906 470 LNQIVISGGNDQTVKVWHFKQTGKPPLRSIK----LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGH-- 543 (583)
Q Consensus 470 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h-- 543 (583)
++.+.+ |+.++-+..++..++ +. ..+. ....|.++...++|.+.+ |+. +-+..||..+++........
T Consensus 417 ~g~lWi-gt~~~Gl~~~~~~~~--~~-~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~ 490 (781)
T 3v9f_A 417 EGNLWF-GTYLGNISYYNTRLK--KF-QIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNS 490 (781)
T ss_dssp TSCEEE-EETTEEEEEECSSSC--EE-EECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTS
T ss_pred CCCEEE-EeccCCEEEEcCCCC--cE-EEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCccc
Confidence 887555 555566888887664 32 2222 235688888888877554 445 56889998876543322211
Q ss_pred ---ccceeeEEecCCCcEEEEEeCCCeEEEEeCCCcc
Q psy14906 544 ---MGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577 (583)
Q Consensus 544 ---~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~ 577 (583)
...|.++...++|++.+....+| |..|+..+++
T Consensus 491 ~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~ 526 (781)
T 3v9f_A 491 QLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQL 526 (781)
T ss_dssp SCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCE
T ss_pred ccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCe
Confidence 35789999999988666443344 7778876554
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=1.8e-11 Score=113.15 Aligned_cols=218 Identities=11% Similarity=0.017 Sum_probs=144.8
Q ss_pred CcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eCeEEEEEcCCeEEEEeccceeeeeec
Q psy14906 31 HLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DFFHIYTSANNIIYAWRRGIDIVGTYK 108 (583)
Q Consensus 31 ~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~~i~vw~~~~~~~~~~~ 108 (583)
..+....|+|++...+++...++.|..||.++++..... ....+.++++ ++++++++. ..|.+||........+.
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~--~~~~v~~i~~~~dg~l~v~~~-~gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA--LPFMGSALAKISDSKQLIASD-DGLFLRDTATGVLTLHA 125 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE--CSSCEEEEEEEETTEEEEEET-TEEEEEETTTCCEEEEE
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE--CCCcceEEEEeCCCeEEEEEC-CCEEEEECCCCcEEEEe
Confidence 456778899887776666667899999999987654322 3457888876 667777764 45999997433333332
Q ss_pred cc-----CccEEEE--ccCCCEEEEEeC------CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCC
Q psy14906 109 GH-----TSPVHLI--LPFGPHLISVDE------ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD 175 (583)
Q Consensus 109 ~h-----~~~v~~i--s~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 175 (583)
.. ...+..+ +|+|+++++... .+.|..++ +++.. .+. ........++|+||++
T Consensus 126 ~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~-----------~~~~~~~~i~~s~dg~ 191 (326)
T 2ghs_A 126 ELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLF-----------ADISIPNSICFSPDGT 191 (326)
T ss_dssp CSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEE-----------EEESSEEEEEECTTSC
T ss_pred eCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-Eee-----------CCCcccCCeEEcCCCC
Confidence 21 2346665 899987765432 24455555 45433 222 2223467899999998
Q ss_pred EEEEE-ecCCeEEEEEcc--CC-ce-----eEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhc
Q psy14906 176 IIGVG-LSNKKIILHNIL--TD-ES-----LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA 246 (583)
Q Consensus 176 ~l~~~-~~d~~i~iw~~~--~~-~~-----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~ 246 (583)
.|+.+ +.++.|.+|++. ++ +. ...+......+..+++.++|. +.++...++.|.+||. +++.+..+ ..
T Consensus 192 ~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~-~g~~~~~i-~~ 268 (326)
T 2ghs_A 192 TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDT-DGNHIARY-EV 268 (326)
T ss_dssp EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECT-TCCEEEEE-EC
T ss_pred EEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECC-CCCEEEEE-EC
Confidence 77555 456899999985 55 32 222223345678899999998 6666656678999998 56666666 44
Q ss_pred cccceEEEEEe-cCCCEEEEEeC
Q psy14906 247 HRKVVTGAHFL-YNEPLLVTSSP 268 (583)
Q Consensus 247 ~~~~v~~~~~~-~~~~~l~s~~~ 268 (583)
+...+.+++|. ++++.|+.++.
T Consensus 269 ~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 269 PGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp SCSBEEEEEEESTTSCEEEEEEB
T ss_pred CCCCcEEEEEecCCCCEEEEEec
Confidence 55679999998 88876655443
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=99.52 E-value=3.3e-11 Score=114.27 Aligned_cols=307 Identities=9% Similarity=0.019 Sum_probs=189.1
Q ss_pred CCCEEEEEecCCeEEEEEccCCceeEEEeccC---------CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhh
Q psy14906 173 VVDIIGVGLSNKKIILHNILTDESLMEFIQTW---------GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI 243 (583)
Q Consensus 173 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 243 (583)
++..|.+++.++.|..+|.++|+.+..+.... ..+.+.-...++ .++.++.++.|..+|..+++.+...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGG--HVYIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETT--EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCC--EEEEEcCCCEEEEEECCCCCEEEEE
Confidence 46678888888999999999999988876531 233332222334 5778888999999999999887655
Q ss_pred hhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCC-----eeEEEeeCCCCEEEEeeCCCc
Q psy14906 244 KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP-----NYIQFYGNSSDNILSAAGDST 318 (583)
Q Consensus 244 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~l~~~~~dg~ 318 (583)
............. +..++.++.++.+..+|.. +++.+.......... ...... +..++.+..++.
T Consensus 130 -~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~----tG~~~W~~~~~~~~~~~~~~~~~~~~---~~~v~~g~~~g~ 199 (376)
T 3q7m_A 130 -KVAGEALSRPVVS--DGLVLIHTSNGQLQALNEA----DGAVKWTVNLDMPSLSLRGESAPTTA---FGAAVVGGDNGR 199 (376)
T ss_dssp -ECSSCCCSCCEEE--TTEEEEECTTSEEEEEETT----TCCEEEEEECCC-----CCCCCCEEE---TTEEEECCTTTE
T ss_pred -eCCCceEcCCEEE--CCEEEEEcCCCeEEEEECC----CCcEEEEEeCCCCceeecCCCCcEEE---CCEEEEEcCCCE
Confidence 2222111112222 3467778889988888543 334443333221110 222222 457888888999
Q ss_pred EEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccc
Q psy14906 319 LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMD 398 (583)
Q Consensus 319 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 398 (583)
+..+|..+++..-.........
T Consensus 200 l~~~d~~tG~~~w~~~~~~~~~---------------------------------------------------------- 221 (376)
T 3q7m_A 200 VSAVLMEQGQMIWQQRISQATG---------------------------------------------------------- 221 (376)
T ss_dssp EEEEETTTCCEEEEEECCC-------------------------------------------------------------
T ss_pred EEEEECCCCcEEEEEecccCCC----------------------------------------------------------
Confidence 9999998876543321100000
Q ss_pred ceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee
Q psy14906 399 DMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG 478 (583)
Q Consensus 399 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 478 (583)
. ............+ .. .+..+++++.++.+..+|..+++....... .....+.. ++..++.++
T Consensus 222 ~--~~~~~~~~~~~~p----~~--~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~-------~~~~~~~~--~~~~l~~~~ 284 (376)
T 3q7m_A 222 S--TEIDRLSDVDTTP----VV--VNGVVFALAYNGNLTALDLRSGQIMWKREL-------GSVNDFIV--DGNRIYLVD 284 (376)
T ss_dssp ----------CCCCCC----EE--ETTEEEEECTTSCEEEEETTTCCEEEEECC-------CCEEEEEE--ETTEEEEEE
T ss_pred C--cccccccccCCCc----EE--ECCEEEEEecCcEEEEEECCCCcEEeeccC-------CCCCCceE--ECCEEEEEc
Confidence 0 0000000000000 01 246777788899999999999988766521 22344444 356677788
Q ss_pred cCCcEEEEEccCCCCCceEEeec-c-CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceee-EEecCC
Q psy14906 479 NDQTVKVWHFKQTGKPPLRSIKL-D-NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTD-ADFSPD 555 (583)
Q Consensus 479 ~dg~i~iwd~~~~~~~~~~~~~~-~-~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~-l~~s~d 555 (583)
.++.|..+|..++ +.+..... . ........ .+..|++++.+|.++.+|..+++.+.........+.. ... .
T Consensus 285 ~~g~l~~~d~~tG--~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~ 358 (376)
T 3q7m_A 285 QNDRVMALTIDGG--VTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--A 358 (376)
T ss_dssp TTCCEEEEETTTC--CEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE--E
T ss_pred CCCeEEEEECCCC--cEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE--E
Confidence 8999999999988 76665542 1 12222232 3567888999999999999999998777653444333 222 2
Q ss_pred CcEEEEEeCCCeEEEEe
Q psy14906 556 SRWLITASMDCTIRVWD 572 (583)
Q Consensus 556 ~~~l~s~~~d~~i~vw~ 572 (583)
+..|+.++.+|.|..|+
T Consensus 359 ~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 359 DGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TTEEEEEBTTSCEEEEE
T ss_pred CCEEEEEeCCCEEEEEe
Confidence 45677788999999987
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.51 E-value=1.2e-11 Score=112.76 Aligned_cols=223 Identities=10% Similarity=-0.010 Sum_probs=151.2
Q ss_pred cCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eCeEEEEEcCCeEEEEeccceeeeee
Q psy14906 30 NHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DFFHIYTSANNIIYAWRRGIDIVGTY 107 (583)
Q Consensus 30 ~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~~i~vw~~~~~~~~~~ 107 (583)
...+....|+|+...++++-..++.|..||.++++... + .....+.++++ +++++++. ++.|.+||........+
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~-~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-V-TMDAPVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-E-ECSSCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-E-eCCCceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEE
Confidence 45668889998877776666678999999998876532 2 23467888887 56766665 67899999754333333
Q ss_pred cc-----cCccEEEE--ccCCCEEEEEeCC---------CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeC
Q psy14906 108 KG-----HTSPVHLI--LPFGPHLISVDEE---------SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPS 171 (583)
Q Consensus 108 ~~-----h~~~v~~i--s~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 171 (583)
.. ....+..+ +|+|+++++...+ ..-.||.+.....+..+. ........++|+
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~-----------~~~~~pngi~~s 157 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYF-----------DQVDISNGLDWS 157 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEE-----------EEESBEEEEEEC
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEe-----------eccccccceEEc
Confidence 21 12335555 8999977654321 234566554322222222 223456789999
Q ss_pred CCCCEEEE-EecCCeEEEEEc--cCCce-----eEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhh
Q psy14906 172 PVVDIIGV-GLSNKKIILHNI--LTDES-----LMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI 243 (583)
Q Consensus 172 ~~~~~l~~-~~~d~~i~iw~~--~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 243 (583)
||++.|.+ .+.++.|.+|++ .++.. ...+..+......+++.++|. +.++....+.|.+||.++++.+..+
T Consensus 158 pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 158 LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTCCEEEEE
T ss_pred CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCceEEEEE
Confidence 99987754 456789999987 45543 222333346788999999997 7777777788999999989888877
Q ss_pred hhccccceEEEEEe-cCCCEEEEEeC
Q psy14906 244 KKAHRKVVTGAHFL-YNEPLLVTSSP 268 (583)
Q Consensus 244 ~~~~~~~v~~~~~~-~~~~~l~s~~~ 268 (583)
..+...+++++|. |+++.|+.++.
T Consensus 237 -~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 237 -KLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp -ECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred -ECCCCCceEEEEeCCCCCEEEEEcC
Confidence 4566789999998 88876665543
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.2e-11 Score=115.82 Aligned_cols=247 Identities=9% Similarity=0.026 Sum_probs=159.0
Q ss_pred CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCC--eEEEEEccCCCC
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN--TLKLWIFDKADG 282 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~--~i~~w~~~~~~~ 282 (583)
.....++|+++++ ++++...++.|++||..+++..... .. ..... ++|+++++.|+.+..++ .|.+++.+. .
T Consensus 131 ~~P~~la~d~~g~-lyv~d~~~~~I~~id~~~g~~~~~~-~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~--~ 204 (409)
T 3hrp_A 131 KYMWGIAAVGNNT-VLAYQRDDPRVRLISVDDNKVTTVH-PG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKAS--G 204 (409)
T ss_dssp CCEEEEEECSTTE-EEEEETTTTEEEEEETTTTEEEEEE-ET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGG--T
T ss_pred CCceEEEEeCCCC-EEEEecCCCcEEEEECCCCEEEEee-cc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCC--C
Confidence 4678999999998 8888888899999999987765544 22 22333 89999999998888766 676675432 1
Q ss_pred Cc-eeeEEecc-CCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCc
Q psy14906 283 NG-RLLRIREG-HSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPP 360 (583)
Q Consensus 283 ~~-~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (583)
.. ..+..... ....+.+++++|. +..|+.+..++.|+.||..++........
T Consensus 205 ~~~~~~g~~~~~~~~~p~~iav~p~-~g~lyv~d~~~~I~~~d~~~~~~~~~~~~------------------------- 258 (409)
T 3hrp_A 205 WAPTRIGQLGSTFSGKIGAVALDET-EEWLYFVDSNKNFGRFNVKTQEVTLIKQL------------------------- 258 (409)
T ss_dssp TCEEEEEECCTTSCSCCCBCEECTT-SSEEEEECTTCEEEEEETTTCCEEEEEEC-------------------------
T ss_pred ceeEEeeeccchhcCCcEEEEEeCC-CCeEEEEECCCcEEEEECCCCCEEEEecc-------------------------
Confidence 11 11212222 4566789999974 44566677788999999876532110000
Q ss_pred cceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCce-EEEEccC-CcEEEEEecCceEEE
Q psy14906 361 VSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT-CVYITHC-GNFVLIGYSSGHVDR 438 (583)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~s~~-~~~l~~~~~dg~i~i 438 (583)
.. ......... .++++|+ +.++++...++.|+.
T Consensus 259 ------------------------------~~---------------~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~ 293 (409)
T 3hrp_A 259 ------------------------------EL---------------SGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYK 293 (409)
T ss_dssp ------------------------------CC---------------CSCCCCSSCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred ------------------------------cc---------------cCCCCCCccccEEEeCCCCEEEEEeCCCCEEEE
Confidence 00 000001123 8999995 556666667888999
Q ss_pred EEcccCccccccCCCCCC---------CcccCeeEEEEeCCCcEEEEee-cCCcEEEEEccCCCCCceEEeec-------
Q psy14906 439 FNIQSGAHRGSYGHDNQP---------GHVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQTGKPPLRSIKL------- 501 (583)
Q Consensus 439 ~d~~~~~~~~~~~~~~~~---------~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~------- 501 (583)
|+.... ........... ..-.....++++|+|+++++-. .++.|+.|++.++ ........
T Consensus 294 ~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G--~v~~~~g~~~~~g~~ 370 (409)
T 3hrp_A 294 ITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDG--YVSTVAGQVDVASQI 370 (409)
T ss_dssp ECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTT--EEEEEEECTTCBSCC
T ss_pred EecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCC--EEEEEeCCCCCCCcC
Confidence 987543 11111000000 1124578999999999888877 7899999997665 43322222
Q ss_pred --------cCCeeeEEeccCCcEEEEEeCCceEEEEEc
Q psy14906 502 --------DNGISFFRTHQESSMLAVCLDDFTVNIIDI 531 (583)
Q Consensus 502 --------~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 531 (583)
-.....++++++|.++++-..++.|+.+++
T Consensus 371 ~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 371 DGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 135788999999888888888888888765
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.50 E-value=2.3e-12 Score=120.17 Aligned_cols=263 Identities=10% Similarity=0.040 Sum_probs=168.4
Q ss_pred cceEEEeeCCCCCEEEEEe--cCCeEEEEEccCCceeEEEe-------ccCCCeEEEEEecCCCCEEEEEcC-----CCc
Q psy14906 163 SCVNVLEPSPVVDIIGVGL--SNKKIILHNILTDESLMEFI-------QTWGPVTALSFRTDGPPMMVSGSN-----TGH 228 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~s~~~-----dg~ 228 (583)
.....++++++|+++++.. .++.++||.+.+++. ..+. .+...+..++++++++ ++++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCCe
Confidence 5788999999999988864 234356666555543 3222 2346799999999987 6555433 578
Q ss_pred EEEEeCCCCeehhhhhh-----ccccceEEEEEecCCCEE-EEEe---CCCeEEEEEccCCCCCceeeEEeccCCCCCe-
Q psy14906 229 LTVWNLEDRQVENQIKK-----AHRKVVTGAHFLYNEPLL-VTSS---PDNTLKLWIFDKADGNGRLLRIREGHSAPPN- 298 (583)
Q Consensus 229 i~vwd~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l-~s~~---~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~- 298 (583)
|.+||+.+++.+..+.. .+...+..+++++++..+ ++.. .++.|.+|+++ .++..+.+.+|.....
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~----~g~~~r~~~~~~~~~~~ 170 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ----TGLAARVLQGYPGIAPE 170 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT----TCCEEEECTTCTTTSCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC----CCCEEEEecCCCccccc
Confidence 99999998886655421 123456899999865444 4444 57889999664 3445555555432111
Q ss_pred eEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEE
Q psy14906 299 YIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIA 378 (583)
Q Consensus 299 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (583)
...+.+ ++..+.+.+.++.+..|.
T Consensus 171 ~~~~~~-~g~~~~~~~~~g~~~~~~------------------------------------------------------- 194 (343)
T 2qe8_A 171 DIDLVI-DGVPVQIGQPDGTVIRPH------------------------------------------------------- 194 (343)
T ss_dssp SCCCEE-TTEECBEECTTSCEECCC-------------------------------------------------------
T ss_pred ccceeE-CCEEEEeccCCCceecee-------------------------------------------------------
Confidence 133343 565666666666655442
Q ss_pred EEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCc-eEEEEEccc---Cc-----cccc
Q psy14906 379 AIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG-HVDRFNIQS---GA-----HRGS 449 (583)
Q Consensus 379 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~i~i~d~~~---~~-----~~~~ 449 (583)
..+..++++|+|+.|+++...+ .++.++... +. ....
T Consensus 195 ----------------------------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T 2qe8_A 195 ----------------------------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSK 240 (343)
T ss_dssp ----------------------------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTT
T ss_pred ----------------------------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcc
Confidence 1356799999999888887665 565555421 11 0011
Q ss_pred cCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeec--cCCeeeEEeccCCcEEEEEeCCceE
Q psy14906 450 YGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL--DNGISFFRTHQESSMLAVCLDDFTV 526 (583)
Q Consensus 450 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i 526 (583)
+.. .++......++++++|+++++...++.|.+||..++ +....... ...+..+++.++++++++....+.+
T Consensus 241 ~~~---~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G--~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 241 IER---YSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADR--AYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp CEE---EEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTT--EEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred eEe---cccCCCCceEEECCCCCEEEEccCCCeEEEEECCCC--CEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 100 134446678999999999999888999999998444 33333322 2458899999998887777655444
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.49 E-value=1.4e-12 Score=120.73 Aligned_cols=130 Identities=11% Similarity=0.098 Sum_probs=106.8
Q ss_pred ceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCC
Q psy14906 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP 494 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 494 (583)
++.++| |+++|+++ .++.|++||+.+....... ..|...+.++.+.+.. ++++..||.|.+||+..+ .
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~-----~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~--~ 157 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTV-----TSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTK--S 157 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEE-----EECSSCEEEEEECSSE--EEEEETTSEEEEEETTTC--C
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCcc-----ceeecceeeEEecCCC--EEEEECCCCEEEEEccCC--c
Confidence 889999 99999999 8899999999876654444 4666778888776543 888899999999999977 4
Q ss_pred ceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccce--EEee------c---ccccceeeEEecCCCcEEEE
Q psy14906 495 PLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI--IRKL------S---GHMGQLTDADFSPDSRWLIT 561 (583)
Q Consensus 495 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~------~---~h~~~v~~l~~s~d~~~l~s 561 (583)
... ....|++++|||+| +++|..||.+++|+.+.++. ..++ . +|...|.+|.|.+++.+|++
T Consensus 158 ~~~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 158 TKQ---LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEE---EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred ccc---ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 432 45689999999999 78899999999999887775 4555 2 47788999999999999886
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.1e-11 Score=113.58 Aligned_cols=238 Identities=13% Similarity=0.085 Sum_probs=152.7
Q ss_pred CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEE
Q psy14906 194 DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLK 273 (583)
Q Consensus 194 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~ 273 (583)
+..+..+...........|+|+++.++++...++.|..|+.. ++. ..+ ..+...+..++++++|+++++...++.|.
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~-~~~-~~~~~~~~gl~~d~dG~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV-DVL-LDATAFTNGNAVDAQQRLVHCEHGRRAIT 110 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE-EEE-EESCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE-EEE-eCCCCccceeeECCCCCEEEEECCCCEEE
Confidence 344455555557788999999998678888889999999984 442 333 34566789999999999777666667888
Q ss_pred EEEccCCCCCceeeE-Eecc-CCCCCeeEEEeeCCCCEEEE----eeC-------------CCcEEEEEccccccceeec
Q psy14906 274 LWIFDKADGNGRLLR-IREG-HSAPPNYIQFYGNSSDNILS----AAG-------------DSTLRIFNTKSETSNKNLG 334 (583)
Q Consensus 274 ~w~~~~~~~~~~~~~-~~~~-~~~~v~~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~ 334 (583)
+|+.+ +....+. ...+ ....+..+++.| +|...++ +.. .+.|..+|..+++.
T Consensus 111 ~~~~~---g~~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~----- 181 (305)
T 3dr2_A 111 RSDAD---GQAHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL----- 181 (305)
T ss_dssp EECTT---SCEEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC-----
T ss_pred EECCC---CCEEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE-----
Confidence 88543 2222221 1111 123466788876 6766665 221 12233333322211
Q ss_pred cchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCC
Q psy14906 335 IASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSK 414 (583)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (583)
.... . ...
T Consensus 182 ---------------------------------------------------------------~~~~----~-----~~~ 189 (305)
T 3dr2_A 182 ---------------------------------------------------------------QRMA----D-----LDH 189 (305)
T ss_dssp ---------------------------------------------------------------EEEE----E-----ESS
T ss_pred ---------------------------------------------------------------EEEe----c-----CCC
Confidence 0000 0 034
Q ss_pred ceEEEEccCCcEEEEEecC------ceEEEEEcccCccc--cccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEE
Q psy14906 415 PTCVYITHCGNFVLIGYSS------GHVDRFNIQSGAHR--GSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~d------g~i~i~d~~~~~~~--~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iw 486 (583)
...++|+||++.|+++... +.|++|++..+... ..+. .........++++++|++.++. .+ .|.+|
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~----~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~ 263 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFA----SVPDGLPDGFCVDRGGWLWSSS-GT-GVCVF 263 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEE----CCSSSCCCSEEECTTSCEEECC-SS-EEEEE
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEE----ECCCCCCCeEEECCCCCEEEec-CC-cEEEE
Confidence 5689999999988887665 78999998754311 1111 1123445678999999955444 44 49999
Q ss_pred EccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCc
Q psy14906 487 HFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDF 524 (583)
Q Consensus 487 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 524 (583)
+.+ + +.+..+..+..+..++|+|+++.|.+++.++
T Consensus 264 ~~~-g--~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 264 DSD-G--QLLGHIPTPGTASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp CTT-S--CEEEEEECSSCCCEEEECTTSCEEEEEETTE
T ss_pred CCC-C--CEEEEEECCCceeEEEEeCCCCEEEEEcCCe
Confidence 984 4 6677777666799999999999888888764
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.8e-12 Score=119.42 Aligned_cols=253 Identities=15% Similarity=0.023 Sum_probs=167.4
Q ss_pred CCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eCeEEEEEcCCeEEEEeccceeeeeecccCccEEEEc
Q psy14906 41 RRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLIL 118 (583)
Q Consensus 41 ~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~is 118 (583)
+.+..+.+.+.++.|..|| .+++.+.....+...+.++.. ++.+.+++.+ |..+|.+++.+..+...........
T Consensus 28 d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~--l~~~d~~g~~~~~~~~~~~~~~~~~ 104 (330)
T 3hxj_A 28 AKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFGSDK--VYAINPDGTEKWRFDTKKAIVSDFT 104 (330)
T ss_dssp CTTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCSSCE--EEEECCCGGGGGGSCC-----CCEE
T ss_pred ccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEecCc--EEEECCCCcEEEEEECCCCcccCce
Confidence 4455556666688899999 888887766655555566666 4455555444 8888876655444443332222221
Q ss_pred cCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeE
Q psy14906 119 PFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLM 198 (583)
Q Consensus 119 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~ 198 (583)
-.+..|..++.++.|..+|.. ++...... .....+.++...+++. |.+++.++.|..+|.. ++.+.
T Consensus 105 ~~~~~l~v~t~~~~l~~~d~~-g~~~~~~~-----------~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~ 170 (330)
T 3hxj_A 105 IFEDILYVTSMDGHLYAINTD-GTEKWRFK-----------TKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKW 170 (330)
T ss_dssp EETTEEEEECTTSEEEEECTT-SCEEEEEE-----------CSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEE
T ss_pred EECCEEEEEecCCEEEEEcCC-CCEEEEEc-----------CCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeE
Confidence 226677788889999999998 88777665 3344455666777776 5557778899999998 88887
Q ss_pred EEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEcc
Q psy14906 199 EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 199 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 278 (583)
.+......+.++...+++. +..++ +.+..+| .+++..... ......+.++...++|. |..++.++.+..+ +
T Consensus 171 ~~~~~~~~~~~~~~d~~g~--l~v~t--~~l~~~d-~~g~~~~~~-~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~--~ 241 (330)
T 3hxj_A 171 RFKTNDAITSAASIGKDGT--IYFGS--DKVYAIN-PDGTEKWNF-YAGYWTVTRPAISEDGT-IYVTSLDGHLYAI--N 241 (330)
T ss_dssp EEECSSCCCSCCEECTTCC--EEEES--SSEEEEC-TTSCEEEEE-CCSSCCCSCCEECTTSC-EEEEETTTEEEEE--C
T ss_pred EEecCCCceeeeEEcCCCE--EEEEe--CEEEEEC-CCCcEEEEE-ccCCcceeceEECCCCe-EEEEcCCCeEEEE--C
Confidence 7776666778888878886 45555 7899999 667666555 33445677888888876 4556667777777 4
Q ss_pred CCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEc
Q psy14906 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324 (583)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 324 (583)
. .+..+.........+..+... .+..|..++.+|.+..+|.
T Consensus 242 ~---~g~~~~~~~~~~~~~~~~~~~--~~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 242 P---DGTEKWRFKTGKRIESSPVIG--NTDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp T---TSCEEEEEECSSCCCSCCEEC--TTSCEEEECTTCEEEEECT
T ss_pred C---CCCEeEEeeCCCCccccceEc--CCCeEEEecCCCCEEEECC
Confidence 2 233444444333444455554 3457778888888998885
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-11 Score=118.96 Aligned_cols=310 Identities=11% Similarity=0.065 Sum_probs=195.2
Q ss_pred EEEEecCCeEEEEEccCCceeEEEec---------------------------------c------CCCeEEEEEec---
Q psy14906 177 IGVGLSNKKIILHNILTDESLMEFIQ---------------------------------T------WGPVTALSFRT--- 214 (583)
Q Consensus 177 l~~~~~d~~i~iw~~~~~~~~~~~~~---------------------------------~------~~~v~~~~~~~--- 214 (583)
+.+|+..|+++|+-+.+++.++.+.- + .+.......|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 55678889999998888777766520 0 01122244444
Q ss_pred --CCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEE-e-cCCCEEEEEeC------------------CCeE
Q psy14906 215 --DGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF-L-YNEPLLVTSSP------------------DNTL 272 (583)
Q Consensus 215 --~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~l~s~~~------------------d~~i 272 (583)
||++++++...+..|.+.|+.+.++...+.......+..+++ + |+++++++++. ++.+
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 888666666677889999999999777442123356788888 5 99999988852 3567
Q ss_pred EEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcE-EEEEccccccceeeccchhhhhhhhhhcchhc
Q psy14906 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL-RIFNTKSETSNKNLGIASANRNNLKRKNRLEK 351 (583)
Q Consensus 273 ~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i-~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (583)
.+.|.+ ..+....+.-.. ....++++| +++++++.+.+..- ...+..+...
T Consensus 178 tvID~~----t~~v~~qI~Vgg-~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~---------------------- 229 (595)
T 1fwx_A 178 TAVDAD----KWEVAWQVLVSG-NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAE---------------------- 229 (595)
T ss_dssp EEEETT----TTEEEEEEEESS-CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCS----------------------
T ss_pred EEEECC----CCeEEEEEEeCC-CccceEECC-CCCEEEEEecCcccCcchhhccccc----------------------
Confidence 777554 345555544322 456788887 79999888875321 0001000000
Q ss_pred cccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe
Q psy14906 352 MNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY 431 (583)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 431 (583)
...+.+.+..... .+.++|++...
T Consensus 230 --------------------------------~d~v~V~~~~~~~----------------------~~v~~Gk~~~i-- 253 (595)
T 1fwx_A 230 --------------------------------MDHIVVFNIAEIE----------------------KAIAAGDYQEL-- 253 (595)
T ss_dssp --------------------------------EEEEEEEEHHHHH----------------------HHHHHTCSEEE--
T ss_pred --------------------------------cceEEEeecccee----------------------EeccCCCeeEE--
Confidence 0012222211110 12233444333
Q ss_pred cCceEEEEEccc--Ccc-ccccCCCCCCCcccCeeEEEEeCCCcEEEEee-cCCcEEEEEccCCC----------CCceE
Q psy14906 432 SSGHVDRFNIQS--GAH-RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQTG----------KPPLR 497 (583)
Q Consensus 432 ~dg~i~i~d~~~--~~~-~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~----------~~~~~ 497 (583)
+.|.+.|..+ ++. +..+ .-.....++.++|||++++.++ .+.+|.++|+.+.. .....
T Consensus 254 --~~V~VID~~~~~~~~~~~~I------pvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~ 325 (595)
T 1fwx_A 254 --NGVKVVDGRKEASSLFTRYI------PIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA 325 (595)
T ss_dssp --TTEEEEECSGGGCCSSEEEE------EEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE
T ss_pred --CcEEEEeCcccCCceeEEEE------ecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE
Confidence 4499999987 444 3333 2234567899999999776554 67899999998541 01234
Q ss_pred EeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccc----------cceEEeecccccc-----eeeEEecCCCcEEEEE
Q psy14906 498 SIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT----------CTIIRKLSGHMGQ-----LTDADFSPDSRWLITA 562 (583)
Q Consensus 498 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~----------~~~~~~~~~h~~~-----v~~l~~s~d~~~l~s~ 562 (583)
..........++|+|+|....+..-|++|.+||+++ .+.+.++..|-.+ -..+.++|||++|+++
T Consensus 326 ~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 326 EPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp CCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred EcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 555567899999999995555667799999999987 5567777655433 2345678999999987
Q ss_pred eC---CCe----------EEEEeCCCccc
Q psy14906 563 SM---DCT----------IRVWDIPSSQL 578 (583)
Q Consensus 563 ~~---d~~----------i~vw~~~~~~~ 578 (583)
.. |.. -.++|+..+++
T Consensus 406 Nk~skdr~~~~gp~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 406 SKFSKDRFLNVGPLKPENDQLIDISGDKM 434 (595)
T ss_dssp ESCCTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred CCCCccccccCCCCCCCcceEEEcCCCcE
Confidence 53 432 28899965553
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.3e-11 Score=115.04 Aligned_cols=264 Identities=13% Similarity=0.057 Sum_probs=161.8
Q ss_pred CCeEEEEEecCCCCEEEEEc--CCCcEEEEeCCCCeehhhh------hhccccceEEEEEecCCCEEEEEeC-----CCe
Q psy14906 205 GPVTALSFRTDGPPMMVSGS--NTGHLTVWNLEDRQVENQI------KKAHRKVVTGAHFLYNEPLLVTSSP-----DNT 271 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~l~s~~~-----d~~ 271 (583)
..+..++++|+|+ ++++.. .++.++||.+.+++.. .+ ...+-..+..++++++++++++-.. ++.
T Consensus 17 ~~p~~va~~~~g~-~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGR-LFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSC-EEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCC-EEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 6889999999998 777753 2343555555455533 11 1234568999999999876665433 478
Q ss_pred EEEEEccCCCCCceeeEEecc------CCCCCeeEEEeeCCCCEEEEee---CCCcEEEEEccccccceeeccchhhhhh
Q psy14906 272 LKLWIFDKADGNGRLLRIREG------HSAPPNYIQFYGNSSDNILSAA---GDSTLRIFNTKSETSNKNLGIASANRNN 342 (583)
Q Consensus 272 i~~w~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 342 (583)
|.+||++ .++.+..+.. +...+..+++.+.++..+++-. .++.|.+||+.+++..+.+.....
T Consensus 95 i~~~d~~----tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~---- 166 (343)
T 2qe8_A 95 LVAWDTL----NNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPG---- 166 (343)
T ss_dssp EEEEETT----TTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTT----
T ss_pred EEEEECC----CCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCc----
Confidence 8888654 3444444332 2235688999864344445544 578899999887654332210000
Q ss_pred hhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc
Q psy14906 343 LKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH 422 (583)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 422 (583)
.......+.+
T Consensus 167 ----------------------------------------------------------------------~~~~~~~~~~ 176 (343)
T 2qe8_A 167 ----------------------------------------------------------------------IAPEDIDLVI 176 (343)
T ss_dssp ----------------------------------------------------------------------TSCCSCCCEE
T ss_pred ----------------------------------------------------------------------ccccccceeE
Confidence 0000023344
Q ss_pred CCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCC-cEEEEEccCCCC-C------
Q psy14906 423 CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ-TVKVWHFKQTGK-P------ 494 (583)
Q Consensus 423 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-~i~iwd~~~~~~-~------ 494 (583)
+|..+.+...+|.+..|. ..+..++|+|+++.|+.+..++ .+..++...... .
T Consensus 177 ~g~~~~~~~~~g~~~~~~-------------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~ 237 (343)
T 2qe8_A 177 DGVPVQIGQPDGTVIRPH-------------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAEL 237 (343)
T ss_dssp TTEECBEECTTSCEECCC-------------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHH
T ss_pred CCEEEEeccCCCceecee-------------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhh
Confidence 566666666666554331 2367899999999888887666 444444321100 0
Q ss_pred --ceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecc-cccceeeEEecCCCcEEEEEeCCCe
Q psy14906 495 --PLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG-HMGQLTDADFSPDSRWLITASMDCT 567 (583)
Q Consensus 495 --~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-h~~~v~~l~~s~d~~~l~s~~~d~~ 567 (583)
.+...........++++++|.++++...++.|.+||.++++....... +...+.+++|.++++++++.+..+.
T Consensus 238 ~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~ 313 (343)
T 2qe8_A 238 GSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHH 313 (343)
T ss_dssp HTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGG
T ss_pred hcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcccc
Confidence 011222234567899999999999988899999999856654333322 2456889999999988887764443
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.46 E-value=5.1e-13 Score=123.56 Aligned_cols=179 Identities=12% Similarity=0.113 Sum_probs=131.5
Q ss_pred CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe---------ehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ---------VENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~---------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w 275 (583)
.+++.+++++... ++++|+.+ .+.+|++.+.+ ........+.. |+.++| |+++|+++ .++.|++|
T Consensus 38 ~~~nlLais~~~g-ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 38 ASLQNLDISNSKS-LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp SCCBCEEEETTTT-EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred ccccEEEEcCCCC-EEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 3789999999998 88888887 56679876433 11111134566 999999 89999998 88999999
Q ss_pred EccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccc
Q psy14906 276 IFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEK 355 (583)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (583)
+++... .......|..++.++.+.++ .++++..||.+.+||+.++.....
T Consensus 112 dv~sl~----~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~~~----------------------- 161 (388)
T 1xip_A 112 DLEELS----EFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQL----------------------- 161 (388)
T ss_dssp ESSSTT----CEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEEEE-----------------------
T ss_pred Echhhh----ccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCccccc-----------------------
Confidence 775432 23344556677888877653 388889999999999986643210
Q ss_pred cCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCce
Q psy14906 356 FILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGH 435 (583)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 435 (583)
...++|++|+|+| +++|..||.
T Consensus 162 --------------------------------------------------------~~~Vs~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 162 --------------------------------------------------------AQNVTSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp --------------------------------------------------------EESEEEEEECSSE--EEEEETTSC
T ss_pred --------------------------------------------------------cCCceEEEEcCCc--eEEEEcCCc
Confidence 0469999999999 788999999
Q ss_pred EEEEEcccCcc--ccccCCCC-C---CCcccCeeEEEEeCCCcEEEEe
Q psy14906 436 VDRFNIQSGAH--RGSYGHDN-Q---PGHVGGVRGVVSDNLNQIVISG 477 (583)
Q Consensus 436 i~i~d~~~~~~--~~~~~~~~-~---~~h~~~v~~~~~s~~~~~l~s~ 477 (583)
+++|+...++. ...+..+. . .+|...|.++.|.+++.++++-
T Consensus 184 i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 184 FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 99998887764 33442210 0 1478899999999999988864
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=99.45 E-value=4e-12 Score=118.40 Aligned_cols=300 Identities=14% Similarity=0.008 Sum_probs=188.5
Q ss_pred EeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhcc
Q psy14906 168 LEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAH 247 (583)
Q Consensus 168 ~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 247 (583)
+....++. |.+++.++.|..|| .+++.+..+..+...+.++...+++. +..++.+ +..+|. +++....+ ...
T Consensus 25 ~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~--l~~~d~-~g~~~~~~-~~~ 96 (330)
T 3hxj_A 25 PILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT--IYFGSDK--VYAINP-DGTEKWRF-DTK 96 (330)
T ss_dssp CEECTTSC-EECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE--ECCSSCE--EEEECC-CGGGGGGS-CC-
T ss_pred ceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc--EEEecCc--EEEECC-CCcEEEEE-ECC
Confidence 34444554 55567788899999 88888776665545567777777775 5666655 888886 66666555 222
Q ss_pred ccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccc
Q psy14906 248 RKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 248 ~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
........+. +..+..++.++.+..++. . ++.......+...+.++...+ ++ .++.++.++.+..+|.. +
T Consensus 97 ~~~~~~~~~~--~~~l~v~t~~~~l~~~d~--~---g~~~~~~~~~~~~~~~~~~~~-~g-~l~vgt~~~~l~~~d~~-g 166 (330)
T 3hxj_A 97 KAIVSDFTIF--EDILYVTSMDGHLYAINT--D---GTEKWRFKTKKAIYATPIVSE-DG-TIYVGSNDNYLYAINPD-G 166 (330)
T ss_dssp ----CCEEEE--TTEEEEECTTSEEEEECT--T---SCEEEEEECSSCCCSCCEECT-TS-CEEEECTTSEEEEECTT-S
T ss_pred CCcccCceEE--CCEEEEEecCCEEEEEcC--C---CCEEEEEcCCCceeeeeEEcC-CC-EEEEEcCCCEEEEECCC-C
Confidence 2223333333 445777778888888843 2 233333333444556666653 34 57777788899999977 4
Q ss_pred ccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccc
Q psy14906 328 TSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERC 407 (583)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 407 (583)
+....+.. .
T Consensus 167 ~~~~~~~~---------------------------------------------------------~-------------- 175 (330)
T 3hxj_A 167 TEKWRFKT---------------------------------------------------------N-------------- 175 (330)
T ss_dssp CEEEEEEC---------------------------------------------------------S--------------
T ss_pred CEeEEEec---------------------------------------------------------C--------------
Confidence 43221100 0
Q ss_pred cccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE
Q psy14906 408 KQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487 (583)
Q Consensus 408 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 487 (583)
...+.++...+++...+ ++ +.|..+| .+++....+ ......+.++...+++.+ ..++.++.+..+|
T Consensus 176 ----~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~-----~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~ 241 (330)
T 3hxj_A 176 ----DAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNF-----YAGYWTVTRPAISEDGTI-YVTSLDGHLYAIN 241 (330)
T ss_dssp ----SCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEE-----CCSSCCCSCCEECTTSCE-EEEETTTEEEEEC
T ss_pred ----CCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEE-----ccCCcceeceEECCCCeE-EEEcCCCeEEEEC
Confidence 02345556666776444 44 7799999 777766655 334466888888888764 4456677888887
Q ss_pred ccCCCCCceEEeeccCC-eeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCC
Q psy14906 488 FKQTGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDC 566 (583)
Q Consensus 488 ~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~ 566 (583)
. ++ ..+..+..... +..+.+.+++ .|.+++.+|.+..+|. +++.+..+......+.++...+++++ ..++.+|
T Consensus 242 ~-~g--~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l-~~gt~~G 315 (330)
T 3hxj_A 242 P-DG--TEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTI-YFGTRNG 315 (330)
T ss_dssp T-TS--CEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCE-EEECTTS
T ss_pred C-CC--CEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEE-EEEcCCC
Confidence 4 33 45555544433 3445555455 5667888889999996 67777766655667888888888874 5588899
Q ss_pred eEEEEeCCCc
Q psy14906 567 TIRVWDIPSS 576 (583)
Q Consensus 567 ~i~vw~~~~~ 576 (583)
.+++...+..
T Consensus 316 ~~~~~~~~~~ 325 (330)
T 3hxj_A 316 KFYALFNLEH 325 (330)
T ss_dssp CEEEEEC---
T ss_pred eEEEEecccc
Confidence 9998876543
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=99.45 E-value=7.2e-11 Score=107.65 Aligned_cols=233 Identities=11% Similarity=0.091 Sum_probs=153.7
Q ss_pred CCcceEEEeeCCCCC-EEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 161 WNSCVNVLEPSPVVD-IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 161 ~~~~i~~~~~s~~~~-~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
...-..+..|++++. ++++...++.|..||..+++. ..+.. ...+.+++++++|+ ++++. ++.|.+||.++++.
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~-~~~~~~i~~~~dG~-l~v~~--~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTM-DAPVSSVALRQSGG-YVATI--GTKFCALNWKEQSA 85 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEEC-SSCEEEEEEBTTSS-EEEEE--TTEEEEEETTTTEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeC-CCceEEEEECCCCC-EEEEE--CCeEEEEECCCCcE
Confidence 344566889999654 556666788999999987765 33433 37899999999998 55554 46799999988765
Q ss_pred hhhhh--h-ccccceEEEEEecCCCEEEEEeC---------CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCC
Q psy14906 240 ENQIK--K-AHRKVVTGAHFLYNEPLLVTSSP---------DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSS 307 (583)
Q Consensus 240 ~~~~~--~-~~~~~v~~~~~~~~~~~l~s~~~---------d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 307 (583)
..... . .....+..++++|+|+++++... ...-.+|.++.. +.... +..+....+.++|+| ++
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~---g~~~~-~~~~~~~pngi~~sp-dg 160 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD---HHVKK-YFDQVDISNGLDWSL-DH 160 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT---SCEEE-EEEEESBEEEEEECT-TS
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC---CCEEE-EeeccccccceEEcC-CC
Confidence 33221 0 11245788999999997765432 234577766643 22222 222233457899997 77
Q ss_pred CEEE-EeeCCCcEEEEEcc--ccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCC
Q psy14906 308 DNIL-SAAGDSTLRIFNTK--SETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGK 384 (583)
Q Consensus 308 ~~l~-~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (583)
+.|+ +.+.++.|.+|++. ++.....
T Consensus 161 ~~lyv~~~~~~~i~~~~~d~~~G~~~~~---------------------------------------------------- 188 (297)
T 3g4e_A 161 KIFYYIDSLSYSVDAFDYDLQTGQISNR---------------------------------------------------- 188 (297)
T ss_dssp CEEEEEEGGGTEEEEEEECTTTCCEEEE----------------------------------------------------
T ss_pred CEEEEecCCCCcEEEEeccCCCCcccCc----------------------------------------------------
Confidence 7664 45567889999873 3321100
Q ss_pred ceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeE
Q psy14906 385 NKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRG 464 (583)
Q Consensus 385 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~ 464 (583)
-.+.+... ....+..++++++|++.++....+.|..||..+++.+..+ ..+...+++
T Consensus 189 --~~~~~~~~----------------~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i-----~~p~~~~t~ 245 (297)
T 3g4e_A 189 --RSVYKLEK----------------EEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTV-----KLPVDKTTS 245 (297)
T ss_dssp --EEEEECCG----------------GGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEE-----ECSSSBEEE
T ss_pred --EEEEECCC----------------CCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEE-----ECCCCCceE
Confidence 00000000 0034678999999988888778889999999989888877 455577999
Q ss_pred EEEe-CCCcEEEEee
Q psy14906 465 VVSD-NLNQIVISGG 478 (583)
Q Consensus 465 ~~~s-~~~~~l~s~~ 478 (583)
++|. |+++.|+.++
T Consensus 246 ~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 246 CCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEESGGGCEEEEEE
T ss_pred EEEeCCCCCEEEEEc
Confidence 9998 8877665444
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=1.1e-11 Score=127.32 Aligned_cols=109 Identities=14% Similarity=0.091 Sum_probs=70.3
Q ss_pred EeCCCcEEE-Eeec---CCcEEEEEccCCCCCc-eEEeeccCCeeeEEeccCCcEEEEEeCCc---eEEEEEccccceEE
Q psy14906 467 SDNLNQIVI-SGGN---DQTVKVWHFKQTGKPP-LRSIKLDNGISFFRTHQESSMLAVCLDDF---TVNIIDIDTCTIIR 538 (583)
Q Consensus 467 ~s~~~~~l~-s~~~---dg~i~iwd~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~i~i~d~~~~~~~~ 538 (583)
+++++..|+ .... .+.|..+++.+..... .....+...+. .|+++++.|+....++ .|++||++.+. ..
T Consensus 287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~ 363 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VR 363 (693)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EE
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eE
Confidence 455555443 3333 3578899998762111 23334444443 8999999887766543 78999988554 34
Q ss_pred eec-ccccceeeEEecCCCcEEEEEeCC----CeEEEEeCCCccc
Q psy14906 539 KLS-GHMGQLTDADFSPDSRWLITASMD----CTIRVWDIPSSQL 578 (583)
Q Consensus 539 ~~~-~h~~~v~~l~~s~d~~~l~s~~~d----~~i~vw~~~~~~~ 578 (583)
.+. .+...+..+.++++++.|+....+ ++++.||+.+++.
T Consensus 364 ~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 364 EVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 443 244567788888888877655444 7899999988764
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.43 E-value=8.1e-11 Score=107.83 Aligned_cols=229 Identities=10% Similarity=0.103 Sum_probs=150.6
Q ss_pred ccceEEEEEecCCC-EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccc
Q psy14906 248 RKVVTGAHFLYNEP-LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 248 ~~~v~~~~~~~~~~-~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 326 (583)
........|+|+++ ++++...++.|..|+.+ +. ...+..+...+..+++.+ +++++++...++.|..|+..
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~---g~---~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~- 115 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED---GT---VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD- 115 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETT---SC---EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCC---CC---EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCC-
Confidence 34567889999998 56666678889888542 12 233444556788999997 78766665566789999875
Q ss_pred cccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccc
Q psy14906 327 ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPER 406 (583)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 406 (583)
++. ..+...
T Consensus 116 g~~-~~~~~~---------------------------------------------------------------------- 124 (305)
T 3dr2_A 116 GQA-HLLVGR---------------------------------------------------------------------- 124 (305)
T ss_dssp SCE-EEEECE----------------------------------------------------------------------
T ss_pred CCE-EEEEec----------------------------------------------------------------------
Confidence 321 111000
Q ss_pred ccccCCCCceEEEEccCCcEEEE----Eec-------------CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC
Q psy14906 407 CKQAKQSKPTCVYITHCGNFVLI----GYS-------------SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN 469 (583)
Q Consensus 407 ~~~~~~~~i~~~~~s~~~~~l~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 469 (583)
........+..++++|+|++.++ |.. .+.|+.+|..+++.... . .......++|+|
T Consensus 125 ~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~------~-~~~~p~gl~~sp 197 (305)
T 3dr2_A 125 YAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM------A-DLDHPNGLAFSP 197 (305)
T ss_dssp ETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE------E-EESSEEEEEECT
T ss_pred cCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE------e-cCCCCcceEEcC
Confidence 00000134677899999988776 332 35688888766654332 2 334567899999
Q ss_pred CCcEEEEeecC------CcEEEEEccCCCCCce--EEee--ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEe
Q psy14906 470 LNQIVISGGND------QTVKVWHFKQTGKPPL--RSIK--LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRK 539 (583)
Q Consensus 470 ~~~~l~s~~~d------g~i~iwd~~~~~~~~~--~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 539 (583)
|++.|+.+... +.|.+|++... ... ..+. ....+..+++.++|++.++ ..+ .|.+|+. +++.+..
T Consensus 198 dg~~lyv~~~~~~~~~~~~i~~~~~~~~--~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~-~g~~~~~ 272 (305)
T 3dr2_A 198 DEQTLYVSQTPEQGHGSVEITAFAWRDG--ALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGT-GVCVFDS-DGQLLGH 272 (305)
T ss_dssp TSSEEEEEECCC---CCCEEEEEEEETT--EEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSS-EEEEECT-TSCEEEE
T ss_pred CCCEEEEEecCCcCCCCCEEEEEEecCC--CccCCeEEEECCCCCCCeEEECCCCCEEEe-cCC-cEEEECC-CCCEEEE
Confidence 99977776654 68999998765 211 1111 1234667999999995444 444 4999998 5777777
Q ss_pred ecccccceeeEEecCCCcEEEEEeCCCeE
Q psy14906 540 LSGHMGQLTDADFSPDSRWLITASMDCTI 568 (583)
Q Consensus 540 ~~~h~~~v~~l~~s~d~~~l~s~~~d~~i 568 (583)
+..+. .+.+++|+++++.|..++.++..
T Consensus 273 ~~~~~-~~~~~~f~~d~~~L~it~~~~l~ 300 (305)
T 3dr2_A 273 IPTPG-TASNCTFDQAQQRLFITGGPCLW 300 (305)
T ss_dssp EECSS-CCCEEEECTTSCEEEEEETTEEE
T ss_pred EECCC-ceeEEEEeCCCCEEEEEcCCeEE
Confidence 76554 58999999999888887776533
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=99.43 E-value=5.8e-12 Score=129.24 Aligned_cols=198 Identities=11% Similarity=0.014 Sum_probs=124.4
Q ss_pred ccCccEEE--EccCCCEEEEEe-----CCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe
Q psy14906 109 GHTSPVHL--ILPFGPHLISVD-----EESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL 181 (583)
Q Consensus 109 ~h~~~v~~--is~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 181 (583)
+|...+.. +||||++||.+. ....|++||+.+|+.+.... .......++|+ |++.|+.++
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~------------~~~k~~~~~Ws-Dg~~l~y~~ 192 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL------------KDVKFSGISWL-GNEGFFYSS 192 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE------------EEEESCCCEEE-TTTEEEEEE
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc------------CCceeccEEEe-CCCEEEEEE
Confidence 34445554 499999998532 23579999999998654321 11123568899 999999988
Q ss_pred cCC-------------eEEEEEccCCce--eEEEe--c-cCCCeEEEEEecCCCCEEEEEcC---CCcEEEEeCCCCe-e
Q psy14906 182 SNK-------------KIILHNILTDES--LMEFI--Q-TWGPVTALSFRTDGPPMMVSGSN---TGHLTVWNLEDRQ-V 239 (583)
Q Consensus 182 ~d~-------------~i~iw~~~~~~~--~~~~~--~-~~~~v~~~~~~~~~~~~l~s~~~---dg~i~vwd~~~~~-~ 239 (583)
.+. .|++|++.++.. ...+. . +......+.|+|||++++++... +..|.++|+.++. .
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~ 272 (693)
T 3iuj_A 193 YDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAP 272 (693)
T ss_dssp SSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCC
T ss_pred ecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCc
Confidence 774 399999987643 22232 3 44457889999999955555443 3579999998763 3
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEe-CC---CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSS-PD---NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d---~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 315 (583)
...+ ..+....... +++++..|+..+ .+ +.|..++++. +.......+..|...+. .|++ +++.|+....
T Consensus 273 ~~~l-~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~--~~~~~~~~l~~~~~~~~--~~s~-~g~~lv~~~~ 345 (693)
T 3iuj_A 273 LLTV-QGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN--PGPAHWRDLIPERQQVL--TVHS-GSGYLFAEYM 345 (693)
T ss_dssp CEEE-ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS--CCGGGCEEEECCCSSCE--EEEE-ETTEEEEEEE
T ss_pred eEEE-eCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC--CCccccEEEecCCCCEE--EEEE-ECCEEEEEEE
Confidence 3334 3455555554 666666555444 33 5677775543 22222334555655555 7887 5777766554
Q ss_pred -CC--cEEEEEccc
Q psy14906 316 -DS--TLRIFNTKS 326 (583)
Q Consensus 316 -dg--~i~iwd~~~ 326 (583)
++ .|++||+..
T Consensus 346 ~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 346 VDATARVEQFDYEG 359 (693)
T ss_dssp ETTEEEEEEECTTS
T ss_pred ECCeeEEEEEECCC
Confidence 43 577787764
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=99.38 E-value=5.9e-11 Score=113.87 Aligned_cols=318 Identities=9% Similarity=0.027 Sum_probs=194.9
Q ss_pred EEEEeCCCcEEEEEcCCCcEEEEeec-cCCceEEec----------c-------------c----CCcceEEEeeCC---
Q psy14906 124 LISVDEESNVKVWDIKAEETYLELSF-DNDTFKIMG----------K-------------R----WNSCVNVLEPSP--- 172 (583)
Q Consensus 124 l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~----------~-------------~----~~~~i~~~~~s~--- 172 (583)
+.||+..|.++|+-+.+++.+..+.. .+....-.| . + ..+.....++|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 55778889999999999998888752 222111111 0 1 012223344554
Q ss_pred --CCCEEEEEec-CCeEEEEEccCCceeEEEecc-CCCeEEEEE-e-cCCCCEEEEE------------------cCCCc
Q psy14906 173 --VVDIIGVGLS-NKKIILHNILTDESLMEFIQT-WGPVTALSF-R-TDGPPMMVSG------------------SNTGH 228 (583)
Q Consensus 173 --~~~~l~~~~~-d~~i~iw~~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~~l~s~------------------~~dg~ 228 (583)
||++|.+... ++.|.+.|+.+.+....+.-. ......+++ + |+++ +++++ -.++.
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCc-EEEEecccccccCCCCcccccccccCce
Confidence 8888877655 457999999999988855422 245788888 5 8999 55555 23567
Q ss_pred EEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCC-CceeeEEeccCCCCCeeEEEeeCCC
Q psy14906 229 LTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG-NGRLLRIREGHSAPPNYIQFYGNSS 307 (583)
Q Consensus 229 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~ 307 (583)
+.+.|.++.+...++..+ +....++++|+|+++++.+.+..--.+ ++.... ....+..+... ....+.+ +|
T Consensus 177 vtvID~~t~~v~~qI~Vg--g~pd~~~~spdGk~~~vt~~~se~~~~-i~~~~~~~~d~v~V~~~~----~~~~~v~-~G 248 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVS--GNLDNCDADYEGKWAFSTSYNSEKGMT-LPEMTAAEMDHIVVFNIA----EIEKAIA-AG 248 (595)
T ss_dssp EEEEETTTTEEEEEEEES--SCCCCEEECSSSSEEEEEESCTTCCSS-HHHHTCCSEEEEEEEEHH----HHHHHHH-HT
T ss_pred EEEEECCCCeEEEEEEeC--CCccceEECCCCCEEEEEecCcccCcc-hhhccccccceEEEeecc----ceeEecc-CC
Confidence 999999999988887432 245667899999999998865411000 000000 00000000000 0001122 34
Q ss_pred CEEEEeeCCCcEEEEEccc--ccc-ceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCC
Q psy14906 308 DNILSAAGDSTLRIFNTKS--ETS-NKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGK 384 (583)
Q Consensus 308 ~~l~~~~~dg~i~iwd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (583)
++... +.+.+.|..+ ++. ...+..
T Consensus 249 k~~~i----~~V~VID~~~~~~~~~~~~Ipv------------------------------------------------- 275 (595)
T 1fwx_A 249 DYQEL----NGVKVVDGRKEASSLFTRYIPI------------------------------------------------- 275 (595)
T ss_dssp CSEEE----TTEEEEECSGGGCCSSEEEEEE-------------------------------------------------
T ss_pred CeeEE----CcEEEEeCcccCCceeEEEEec-------------------------------------------------
Confidence 33332 4477777765 221 111100
Q ss_pred ceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe-cCceEEEEEcccCcc------------ccccC
Q psy14906 385 NKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRFNIQSGAH------------RGSYG 451 (583)
Q Consensus 385 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~------------~~~~~ 451 (583)
. ....++.++|||+++++++ .+.+|.++|+.+.+. ...
T Consensus 276 ---------------------g------~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~-- 326 (595)
T 1fwx_A 276 ---------------------A------NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE-- 326 (595)
T ss_dssp ---------------------E------SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEEC--
T ss_pred ---------------------C------CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEE--
Confidence 0 3577899999999887765 578999999986531 111
Q ss_pred CCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC--------CCCceEEeeccCCe------eeEEeccCCcEE
Q psy14906 452 HDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT--------GKPPLRSIKLDNGI------SFFRTHQESSML 517 (583)
Q Consensus 452 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~v------~~~~~s~~~~~l 517 (583)
..-......++|+|+|...++.-.|++|.+||++.. ..+.+..+..+..+ ..+.++|||++|
T Consensus 327 ----v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l 402 (595)
T 1fwx_A 327 ----PELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWL 402 (595)
T ss_dssp ----CBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEE
T ss_pred ----cCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEE
Confidence 133456889999999955566778999999999871 11566666665443 233568999999
Q ss_pred EEEeC---Cce----------EEEEEccccce
Q psy14906 518 AVCLD---DFT----------VNIIDIDTCTI 536 (583)
Q Consensus 518 ~~~~~---dg~----------i~i~d~~~~~~ 536 (583)
++... |+- -.++|+..+++
T Consensus 403 ~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 403 VCLSKFSKDRFLNVGPLKPENDQLIDISGDKM 434 (595)
T ss_dssp EEEESCCTTSSCCCCSSCCEEEEEEECSSSSC
T ss_pred EEcCCCCccccccCCCCCCCcceEEEcCCCcE
Confidence 98764 321 28899965553
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.35 E-value=7.3e-10 Score=102.49 Aligned_cols=229 Identities=10% Similarity=0.057 Sum_probs=147.5
Q ss_pred cCCCEEEE-EeCCCeEEEEEccCCCCCceeeEEec-------cCCCCCeeEEEeeCCCCEEEEeeCC------CcEEEEE
Q psy14906 258 YNEPLLVT-SSPDNTLKLWIFDKADGNGRLLRIRE-------GHSAPPNYIQFYGNSSDNILSAAGD------STLRIFN 323 (583)
Q Consensus 258 ~~~~~l~s-~~~d~~i~~w~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~~~~d------g~i~iwd 323 (583)
+++++|+. +..++.|.++|+.......+..++++ ........+...| ++ .++++..+ |.|.++|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEE
Confidence 77776665 55678899997754444556666663 0111345567776 67 66665554 6788888
Q ss_pred ccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeee
Q psy14906 324 TKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLV 403 (583)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 403 (583)
..+.+.+........
T Consensus 171 ~~T~~v~~~~~~~~~----------------------------------------------------------------- 185 (462)
T 2ece_A 171 HYSFEPLGKWEIDRG----------------------------------------------------------------- 185 (462)
T ss_dssp TTTCCEEEECCSBCT-----------------------------------------------------------------
T ss_pred CCCCeEEEEEccCCC-----------------------------------------------------------------
Confidence 887766554321100
Q ss_pred cccccccCCCCceEEEEccCCcEEEEEe-------------------cCceEEEEEcccCccccccCCCCCCCcccCeeE
Q psy14906 404 PERCKQAKQSKPTCVYITHCGNFVLIGY-------------------SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRG 464 (583)
Q Consensus 404 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~-------------------~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~ 464 (583)
.......+-|+|+++.+++.. ...+|.+||+.+++...++... ........
T Consensus 186 -------~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg---~~g~~P~~ 255 (462)
T 2ece_A 186 -------DQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG---EENRMALE 255 (462)
T ss_dssp -------TCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC---TTEEEEEE
T ss_pred -------CccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC---CCCCccce
Confidence 001233577899999888874 3688999999988777776421 12234455
Q ss_pred EEE--eCCCcEEEEee------cCCcEEEEEccCCCCCceEEee--c-----------------cCCeeeEEeccCCcEE
Q psy14906 465 VVS--DNLNQIVISGG------NDQTVKVWHFKQTGKPPLRSIK--L-----------------DNGISFFRTHQESSML 517 (583)
Q Consensus 465 ~~~--s~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~--~-----------------~~~v~~~~~s~~~~~l 517 (583)
+.| +|++++++.++ .+++|.+|..+.+.....+.+. . ......+.+||||++|
T Consensus 256 i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfL 335 (462)
T 2ece_A 256 LRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFL 335 (462)
T ss_dssp EEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEE
T ss_pred eEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEE
Confidence 555 99999887766 4568887766543111111110 0 2457889999999998
Q ss_pred EEEeC-CceEEEEEccc---cceEEeecccc--------------cceeeEEecCCCcEEEEEe
Q psy14906 518 AVCLD-DFTVNIIDIDT---CTIIRKLSGHM--------------GQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 518 ~~~~~-dg~i~i~d~~~---~~~~~~~~~h~--------------~~v~~l~~s~d~~~l~s~~ 563 (583)
.++.. .+.|.+||+.. .+++..+.... ..-..++++|||++|+++.
T Consensus 336 YVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 336 YLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 88776 58999999853 34554443220 1368899999999999887
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.35 E-value=1.1e-14 Score=136.98 Aligned_cols=259 Identities=10% Similarity=0.008 Sum_probs=141.3
Q ss_pred CCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccc-cce
Q psy14906 173 VVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHR-KVV 251 (583)
Q Consensus 173 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-~~v 251 (583)
++..|++++.|+.|+.||..+|+.+.++.. +.+.+..+..++. ++++++.||.|+.||.++++.+..+ ..+. ..+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w~~-~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLTKL-PFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----C-CEEECTTTCCEEEC-----CCSEEC-SCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCC-EEEEeCCCCEEEEEECCCCceeeee-eccCcccc
Confidence 578899999999999999999999998876 4566666667776 6778889999999999988776544 2221 111
Q ss_pred E-EEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccc
Q psy14906 252 T-GAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330 (583)
Q Consensus 252 ~-~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 330 (583)
. +..+. ++..+++++.++.+..||.. +++.+..+..+. ...++| ++..+++++.|+.|+.||..+++..
T Consensus 84 ~~sp~~~-~~~~v~~g~~dg~v~a~D~~----tG~~~w~~~~~~----~~~~~p-~~~~v~~~~~dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 84 QASPCRS-SDGILYMGKKQDIWYVIDLL----TGEKQQTLSSAF----ADSLSP-STSLLYLGRTEYTITMYDTKTRELR 153 (369)
T ss_dssp TTCSCC------CCCCEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSSSCC
T ss_pred ccCceEe-cCCEEEEEeCCCEEEEEECC----CCcEEEEecCCC----cccccc-cCCEEEEEecCCEEEEEECCCCCEE
Confidence 0 01111 34467778889999999543 344444444332 234555 6788999999999999999888654
Q ss_pred eeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccccccc
Q psy14906 331 KNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQA 410 (583)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 410 (583)
-.+....
T Consensus 154 W~~~~~~------------------------------------------------------------------------- 160 (369)
T 2hz6_A 154 WNATYFD------------------------------------------------------------------------- 160 (369)
T ss_dssp CEEEEEE-------------------------------------------------------------------------
T ss_pred EeEeccc-------------------------------------------------------------------------
Confidence 3321000
Q ss_pred CCCCceEEEEccC---CcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCee-EEEEeCCCcEEEE--eecCCcEE
Q psy14906 411 KQSKPTCVYITHC---GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVR-GVVSDNLNQIVIS--GGNDQTVK 484 (583)
Q Consensus 411 ~~~~i~~~~~s~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s--~~~dg~i~ 484 (583)
.....++++ +..+++++.+|.|+.||..+|+.+..+. ...++. ...+++++...+. ...++.++
T Consensus 161 ----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~------~~~pv~~~~~~~~dg~~~v~~~~~~~~~l~ 230 (369)
T 2hz6_A 161 ----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN------YASPVVAFYVWQREGLRKVMHINVAVETLR 230 (369)
T ss_dssp ----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE------CSSCEEEEEECTTSSCEEECCEEEEHHHHH
T ss_pred ----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec------CCCceEEEEEecCCceEeccceeeccccee
Confidence 000111222 1456778889999999999998877652 233443 3344555543210 00134566
Q ss_pred EEEccCCCCC----ceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEcc
Q psy14906 485 VWHFKQTGKP----PLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 485 iwd~~~~~~~----~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 532 (583)
.+|..++ + .+..+.....+. ...-.+..|++++.+|.++.++..
T Consensus 231 ~ld~~tG--~~~~~~~W~~~~~~~~~--sp~~~~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 231 YLTFMSG--EVGRITKWKYPFPKETE--AKSKLTPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp HHHHHHH--HHHHHHTSCCCCCCHHH--HHHHSEEEECBEECSSCEECCEEE
T ss_pred eeehhcC--CcccceeeeeccCcccc--ccccccceEEEecccCCEEecCcc
Confidence 6666555 4 333333333221 111134578888889999998876
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.34 E-value=6.8e-10 Score=112.64 Aligned_cols=312 Identities=9% Similarity=0.091 Sum_probs=182.2
Q ss_pred CCEEEEEecCCeEEEEEccCCceeEEEeccCCC----------e-EEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhh
Q psy14906 174 VDIIGVGLSNKKIILHNILTDESLMEFIQTWGP----------V-TALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242 (583)
Q Consensus 174 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 242 (583)
+..|.+++.++.|.-+|..+|+.+.++...... + ..+++. +. .++.++.|+.|..+|..+|+.+.+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GD-KVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BT-EEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE--CC-EEEEEcCCCEEEEEECCCCCEeee
Confidence 567777888899999999999999988643211 0 122332 33 688888899999999999988776
Q ss_pred hhhccc---cceEE-EEEecCCCEEEEEeC------CCeEEEEEccCCCCCceeeEEeccC-------------------
Q psy14906 243 IKKAHR---KVVTG-AHFLYNEPLLVTSSP------DNTLKLWIFDKADGNGRLLRIREGH------------------- 293 (583)
Q Consensus 243 ~~~~~~---~~v~~-~~~~~~~~~l~s~~~------d~~i~~w~~~~~~~~~~~~~~~~~~------------------- 293 (583)
...... ..+.+ ... .++ .++.+.. ++.|..+|.. +++.+-.+...
T Consensus 143 ~~~~~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~----tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~ 216 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDAD----TGKLAWRFYTVPGDPALPYEHPELREAAKT 216 (668)
T ss_dssp EECSCTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETT----TCCEEEEEESSCCCTTSCCSSHHHHHHHTT
T ss_pred eccCCCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECC----CCcEEEEecccCCCCCcccccccccccccc
Confidence 622111 11111 111 144 4444432 5778888553 33444333210
Q ss_pred ------------CCCCeeEEEeeCCCCEEEEeeCCCc-------------------EEEEEccccccceeeccchhhhhh
Q psy14906 294 ------------SAPPNYIQFYGNSSDNILSAAGDST-------------------LRIFNTKSETSNKNLGIASANRNN 342 (583)
Q Consensus 294 ------------~~~v~~~~~~~~~~~~l~~~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~~~~~ 342 (583)
......+++.| +...++.+..++. |..+|..+++.
T Consensus 217 ~~g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~------------- 282 (668)
T 1kv9_A 217 WQGDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKL------------- 282 (668)
T ss_dssp CCSSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE-------------
T ss_pred CCccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCce-------------
Confidence 11112467775 4567777766653 33333333322
Q ss_pred hhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc
Q psy14906 343 LKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH 422 (583)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 422 (583)
+|......... .......+.....+..
T Consensus 283 ----------------------------------------------~W~~~~~~~~~-------wd~~~~~~~~~~d~~~ 309 (668)
T 1kv9_A 283 ----------------------------------------------AWHYQVTPGDS-------WDFTATQQITLAELNI 309 (668)
T ss_dssp ----------------------------------------------EEEEESSTTCC-------SCCCCCSCEEEEEEEE
T ss_pred ----------------------------------------------eeEeecCCCcc-------ccccCCCCcEEEEecc
Confidence 22222110000 0000001222233334
Q ss_pred CCc---EEEEEecCceEEEEEcccCccccccCCCCC------C-Cccc------------------------CeeEEEEe
Q psy14906 423 CGN---FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQ------P-GHVG------------------------GVRGVVSD 468 (583)
Q Consensus 423 ~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~------~-~h~~------------------------~v~~~~~s 468 (583)
+|+ .++.++.+|.++++|..+|+.+........ . .... .-..++++
T Consensus 310 ~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~d 389 (668)
T 1kv9_A 310 DGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFN 389 (668)
T ss_dssp TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEE
T ss_pred CCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceEC
Confidence 665 688899999999999999987733211000 0 0000 01126778
Q ss_pred CCCcEEEEe------------------------------------ecCCcEEEEEccCCCCCceEEeeccCCeeeEEecc
Q psy14906 469 NLNQIVISG------------------------------------GNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ 512 (583)
Q Consensus 469 ~~~~~l~s~------------------------------------~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~ 512 (583)
|+..+++.. ..+|.|..||+.++ +.+.......+.....+..
T Consensus 390 p~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG--~~~W~~~~~~~~~~~~~~t 467 (668)
T 1kv9_A 390 PGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQ--KAAWKVPYPTHWNGGTLST 467 (668)
T ss_dssp TTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTT--EEEEEEEESSSCCCCEEEE
T ss_pred CCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCC--cEEEEccCCCCCcCceeEe
Confidence 876655431 13478999999998 8887777766666666667
Q ss_pred CCcEEEEEeCCceEEEEEccccceEEeecccccce-eeEEecCCCc-EEEEEe
Q psy14906 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQL-TDADFSPDSR-WLITAS 563 (583)
Q Consensus 513 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v-~~l~~s~d~~-~l~s~~ 563 (583)
.+.++++++.|+.++.||.++++.+..++...... .-+.+..+|+ +++.++
T Consensus 468 ~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 468 AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred CCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 88899999999999999999999998887543221 2344556776 455443
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.7e-09 Score=99.92 Aligned_cols=213 Identities=9% Similarity=0.020 Sum_probs=135.8
Q ss_pred eEEEEE-cCCeEEEEeccceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEeccc
Q psy14906 84 FHIYTS-ANNIIYAWRRGIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKR 160 (583)
Q Consensus 84 ~~~~~~-~~~~i~vw~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 160 (583)
.++.++ .++.|..||..+.....+. +...+.++ +++|+++++. . ..|.+||..+++.......... .
T Consensus 62 ~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~~~~~-------~ 131 (326)
T 2ghs_A 62 TAWWFNILERELHELHLASGRKTVHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAELESD-------L 131 (326)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEECSSTT-------C
T ss_pred EEEEEECCCCEEEEEECCCCcEEEEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEeeCCCC-------C
Confidence 344443 5678999997654344333 24567776 7888877764 3 4499999988875433221100 1
Q ss_pred CCcceEEEeeCCCCCEEEEEec------CCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q psy14906 161 WNSCVNVLEPSPVVDIIGVGLS------NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL 234 (583)
Q Consensus 161 ~~~~i~~~~~s~~~~~l~~~~~------d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 234 (583)
....+..++++|+|+++++... .+.|..++ +++.. .+..+......++|+|+++.++++.+.++.|.+||+
T Consensus 132 ~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~ 208 (326)
T 2ghs_A 132 PGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPL 208 (326)
T ss_dssp TTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEB
T ss_pred CCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEc
Confidence 1346889999999997765543 23455555 45433 333333567899999999845566666789999998
Q ss_pred C--CC-ee-----hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC
Q psy14906 235 E--DR-QV-----ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306 (583)
Q Consensus 235 ~--~~-~~-----~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 306 (583)
. ++ +. ...+ ......+..+++.++|++.++...++.|..|+. .++.+..+..+...+.+++|..++
T Consensus 209 ~~~~Gl~~~~~~~~~~~-~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-----~g~~~~~i~~~~~~~~~~af~g~d 282 (326)
T 2ghs_A 209 DARTGLPTGKAEVFIDS-TGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-----DGNHIARYEVPGKQTTCPAFIGPD 282 (326)
T ss_dssp CTTTCCBSSCCEEEEEC-TTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-----TCCEEEEEECSCSBEEEEEEESTT
T ss_pred ccccCCcccCceEEEEC-CCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-----CCCEEEEEECCCCCcEEEEEecCC
Confidence 6 55 32 1112 123345678999999988777766788888843 234555555566678999998326
Q ss_pred CCEEEEeeC
Q psy14906 307 SDNILSAAG 315 (583)
Q Consensus 307 ~~~l~~~~~ 315 (583)
++.|+.++.
T Consensus 283 ~~~L~vt~~ 291 (326)
T 2ghs_A 283 ASRLLVTSA 291 (326)
T ss_dssp SCEEEEEEB
T ss_pred CCEEEEEec
Confidence 666655443
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.4e-09 Score=100.63 Aligned_cols=199 Identities=13% Similarity=0.127 Sum_probs=133.9
Q ss_pred cCCCEEEEE-eCCCcEEEEEcCCC----cEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC------CeEE
Q psy14906 119 PFGPHLISV-DEESNVKVWDIKAE----ETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN------KKII 187 (583)
Q Consensus 119 ~~~~~l~s~-~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------~~i~ 187 (583)
+++++|+.. ..+++|.+.|+.+. +...+++...-. . +.....-..+..+|+| +++++..+ +.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~-~---~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVK-K---VSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHH-H---HHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcc-c---ccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 677877764 45789999999765 555555200000 0 0112245667888999 77776665 7899
Q ss_pred EEEccCCceeEEEeccCC---CeEEEEEecCCCCEEEEEc-------------------CCCcEEEEeCCCCeehhhhhh
Q psy14906 188 LHNILTDESLMEFIQTWG---PVTALSFRTDGPPMMVSGS-------------------NTGHLTVWNLEDRQVENQIKK 245 (583)
Q Consensus 188 iw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~s~~-------------------~dg~i~vwd~~~~~~~~~~~~ 245 (583)
++|.++++.+.++..... .-+.+.|+|+++ .+++.. ...+|.+||+.+++.+.++..
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEECCCCeEEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 999999999998873322 244588899999 777764 367899999999888877743
Q ss_pred c-cccceEEEEE--ecCCCEEEEEe------CCCeEEEEEccCCCCCceeeEEe--ccC----------------CCCCe
Q psy14906 246 A-HRKVVTGAHF--LYNEPLLVTSS------PDNTLKLWIFDKADGNGRLLRIR--EGH----------------SAPPN 298 (583)
Q Consensus 246 ~-~~~~v~~~~~--~~~~~~l~s~~------~d~~i~~w~~~~~~~~~~~~~~~--~~~----------------~~~v~ 298 (583)
+ .......+.| +|++++++.+. .+++|.+|..+. +.......+ ... ...+.
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~--g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa 324 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED--GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVT 324 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET--TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCC
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC--CceeEEEEEeCCCccccccccccccccccCCCcee
Confidence 3 2234455656 99999887776 466888876653 222222221 110 24578
Q ss_pred eEEEeeCCCCEEEEeeC-CCcEEEEEccc
Q psy14906 299 YIQFYGNSSDNILSAAG-DSTLRIFNTKS 326 (583)
Q Consensus 299 ~~~~~~~~~~~l~~~~~-dg~i~iwd~~~ 326 (583)
.+.+++ |+++|+++.. .+.|.+||+..
T Consensus 325 ~I~lS~-DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 325 DIDISL-DDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp CEEECT-TSCEEEEEETTTTEEEEEECSS
T ss_pred EEEECC-CCCEEEEEeCCCCEEEEEEecC
Confidence 899997 7888887765 68999999864
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=3.7e-09 Score=104.98 Aligned_cols=384 Identities=11% Similarity=0.042 Sum_probs=190.5
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEE
Q psy14906 121 GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEF 200 (583)
Q Consensus 121 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 200 (583)
+..|+.++.++.|.-+|..+|+.+.+........... .....-..+++ .+..|++++.++.|..+|.++|+.+.++
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~--~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~ 143 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRP--CCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKK 143 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCC--SSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCccccc--ccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeee
Confidence 4455555554459999999999998886432110000 00000011122 3567888889999999999999999887
Q ss_pred eccCC----CeE-EEEEecC---CCCEEEEEc------CCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEE
Q psy14906 201 IQTWG----PVT-ALSFRTD---GPPMMVSGS------NTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266 (583)
Q Consensus 201 ~~~~~----~v~-~~~~~~~---~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 266 (583)
..... .+. ......+ ++..+++++ .++.|..+|..+++.+... +... ..+.|++......
T Consensus 144 ~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~---~~~~---~~~~p~~~~~~~~ 217 (582)
T 1flg_A 144 KFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR---PFVE---GHMGRLNGKDSTV 217 (582)
T ss_dssp ECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE---ESST---TCEEEETTEEEEE
T ss_pred cCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec---CCCc---cccccccCccccc
Confidence 64321 111 1111222 321455554 3789999999999887754 1111 1222333333333
Q ss_pred eCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhh
Q psy14906 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRK 346 (583)
Q Consensus 267 ~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 346 (583)
..+.....|..+......+......+....-..+++.| +..+++.+..+..- |+..... ..
T Consensus 218 ~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~-~~g~vyv~~gn~~~--~~~~~r~----~~------------ 278 (582)
T 1flg_A 218 TGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDA-ETNTIIVGAGNPGP--WNTWART----AK------------ 278 (582)
T ss_dssp SSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEET-TTTEEEEEECCBSS--SCGGGGS----CT------------
T ss_pred ccccccccCCCccccccccccccccCCccccCCceEcC-CCCEEEEeCCCCCc--ccCcccc----cC------------
Confidence 21222334422100001111000011111123566776 45566666543211 2110000 00
Q ss_pred cchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEc-cCC-
Q psy14906 347 NRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYIT-HCG- 424 (583)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~- 424 (583)
+ ..+.. . .......+.+.....+.+ +|......... ..........-+... .+|
T Consensus 279 g----------g~~~~---~---d~~~~~~v~AlD~~TG~~-~W~~q~~~~d~-------wd~~~~~~p~l~~~~~~~G~ 334 (582)
T 1flg_A 279 G----------GNPHD---Y---DSLYTSGQVGVDPSSGEV-KWFYQHTPNDA-------WDFSGNNELVLFDYKAKDGK 334 (582)
T ss_dssp T----------SCSTT---C---CCTTCSEEEEECTTTCCE-EEEEESSTTCC-------SCCCCCCCCEEEEEECSSSC
T ss_pred C----------Ccccc---c---CCcccceEEEEeCCCCCE-EEEEeCCCCCc-------ccccCCCCcEEEeeecCCCC
Confidence 0 00000 0 000001112222222222 13221110000 000000112222222 466
Q ss_pred --cEEEEEecCceEEEEEcccCccccccCCCC-C-------------------C---------Cccc-----------Ce
Q psy14906 425 --NFVLIGYSSGHVDRFNIQSGAHRGSYGHDN-Q-------------------P---------GHVG-----------GV 462 (583)
Q Consensus 425 --~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~-------------------~---------~h~~-----------~v 462 (583)
+.++.++.+|.++++|..+|+.+..+.... . . .... .-
T Consensus 335 ~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w 414 (582)
T 1flg_A 335 IVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNW 414 (582)
T ss_dssp EEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCS
T ss_pred EEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCC
Confidence 378889999999999999998775542210 0 0 0000 00
Q ss_pred eEEEEeCCCcEEEEee---------------------------------cCCcEEEEEccCCCCCceEEeeccCCeeeEE
Q psy14906 463 RGVVSDNLNQIVISGG---------------------------------NDQTVKVWHFKQTGKPPLRSIKLDNGISFFR 509 (583)
Q Consensus 463 ~~~~~s~~~~~l~s~~---------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~ 509 (583)
..++++|+..+++... .+|.|..||+.++ +.+.......+...-.
T Consensus 415 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG--~~~W~~~~~~~~~~g~ 492 (582)
T 1flg_A 415 NPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSG--KVVWEHKEHLPLWAGV 492 (582)
T ss_dssp SCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTC--CEEEEEEESSCCCSCC
T ss_pred CCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCC--CEEEEecCCCCCcccc
Confidence 1356677655554432 3578999999998 8877776655544433
Q ss_pred eccCCcEEEEEeCCceEEEEEccccceEEeecccccce-eeEEecCCCcEE
Q psy14906 510 THQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQL-TDADFSPDSRWL 559 (583)
Q Consensus 510 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v-~~l~~s~d~~~l 559 (583)
....+.++++++.|+.++.||.++|+.+.+++.....+ .-+.|..+|+..
T Consensus 493 ~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 493 LATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred eEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence 44457788889999999999999999998887543322 226677788743
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=5.9e-09 Score=90.68 Aligned_cols=210 Identities=10% Similarity=-0.025 Sum_probs=147.9
Q ss_pred eeeeeeeeee-c--CcccEEEEEeCCCceEEEEee--CCeEEEEecCCcEEEeecCC-CCCCeEEEEeeCeEE-EEE-cC
Q psy14906 20 LRHRALGYVS-N--HLPVVARFIRRRKETLFVTCV--GKAFHVYGCNHFKLLSVSPQ-HEDDITCLSSDFFHI-YTS-AN 91 (583)
Q Consensus 20 ~~~~~~g~~~-~--~~~~~~~~~p~~~~~~i~~~~--~~~i~v~d~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~~~-~~ 91 (583)
..++++..+. + ..|+-+.|+|+ ..++++.+. ++.|.++|+++++.+..+.- .......+++++..+ .+. .+
T Consensus 7 ~~~~vv~~~p~~~~~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~ 85 (266)
T 2iwa_A 7 YIVEVLNEFPHDPYAFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEEEEECCTTCCEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC
T ss_pred cCceEEEEEECCCCCCcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC
Confidence 3466777665 2 23578999876 344444432 68999999999999987642 112223566766433 333 57
Q ss_pred CeEEEEec-cceeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEee
Q psy14906 92 NIIYAWRR-GIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEP 170 (583)
Q Consensus 92 ~~i~vw~~-~~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 170 (583)
+.+.++|. ..+.+.++..-...=..+++||+.|+++..+++|.++|.++.+.+.++...... ..-..++.+.|
T Consensus 86 ~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~------~p~~~~nele~ 159 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNG------HRVIRLNELEY 159 (266)
T ss_dssp SEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETT------EECCCEEEEEE
T ss_pred CEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCC------cccccceeEEE
Confidence 89999996 456677775321122447889998888777899999999999988888743110 01124677888
Q ss_pred CCCCCEEEEEecCCeEEEEEccCCceeEEEecc-------------CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC
Q psy14906 171 SPVVDIIGVGLSNKKIILHNILTDESLMEFIQT-------------WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR 237 (583)
Q Consensus 171 s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 237 (583)
. ++...+....++.|.+.|..+++.+..+... ....+.|+|+|+++.+++++...+.+.+.++...
T Consensus 160 ~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 160 I-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp E-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred E-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 8 7766666656789999999999999888632 1356899999999878888888899998887643
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=3e-06 Score=84.81 Aligned_cols=504 Identities=10% Similarity=-0.016 Sum_probs=254.9
Q ss_pred ceEEEEeeCCeEEEEecCCcEEEeecC-CCCCCeEEEEeeC---eEEEEE-cCCeEEEEeccceeeeee-cccCccEEE-
Q psy14906 44 ETLFVTCVGKAFHVYGCNHFKLLSVSP-QHEDDITCLSSDF---FHIYTS-ANNIIYAWRRGIDIVGTY-KGHTSPVHL- 116 (583)
Q Consensus 44 ~~~i~~~~~~~i~v~d~~~~~~~~~~~-~h~~~v~~~~~~~---~~~~~~-~~~~i~vw~~~~~~~~~~-~~h~~~v~~- 116 (583)
+.+++++..+.|+..|+++......++ ..-..+..+++|. ++..+. .++.|..+++++.....+ .........
T Consensus 6 ~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~Gl 85 (628)
T 4a0p_A 6 EAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGM 85 (628)
T ss_dssp CCEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEE
T ss_pred CcEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceE
Confidence 345666789999999998754333332 2234577888864 444443 567899998866433322 211122223
Q ss_pred -EccCCCEEEEE-eCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec--CCeEEEEEcc
Q psy14906 117 -ILPFGPHLISV-DEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS--NKKIILHNIL 192 (583)
Q Consensus 117 -is~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--d~~i~iw~~~ 192 (583)
+.+.++.|+.+ ...+.|.+.+++.......+. ..-.....|++.|....|..... .+.|...++.
T Consensus 86 AvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~-----------~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d 154 (628)
T 4a0p_A 86 AVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW-----------KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD 154 (628)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC-----------SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe-----------CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCC
Confidence 45555655554 345788888887544322222 22345689999996666655542 5678888876
Q ss_pred CCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeE
Q psy14906 193 TDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTL 272 (583)
Q Consensus 193 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i 272 (583)
... ...+...-.....|++.+++..+.++-...+.|..+|+..... ..+ .........+++.. +.++++-...+.|
T Consensus 155 G~~-~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~-~~~l~~P~glav~~-~~ly~tD~~~~~I 230 (628)
T 4a0p_A 155 GSE-RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVI-ADDLPHPFGLTQYQ-DYIYWTDWSRRSI 230 (628)
T ss_dssp SCS-CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEE-EECCSCEEEEEEET-TEEEEEETTTTEE
T ss_pred CCc-eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEe-eccCCCceEEEEEC-CEEEEecCCCCEE
Confidence 433 3333334467899999998774556666678899999875433 223 23334556777765 4444444456766
Q ss_pred EEEEccCCCCCceeeEEeccCCCCCee------------------------EEEeeCCCCEEEEeeCCCcEEEEEccccc
Q psy14906 273 KLWIFDKADGNGRLLRIREGHSAPPNY------------------------IQFYGNSSDNILSAAGDSTLRIFNTKSET 328 (583)
Q Consensus 273 ~~w~~~~~~~~~~~~~~~~~~~~~v~~------------------------~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 328 (583)
...| ..++... ..+......+.. ++.....+. ..+.+.+|...-.|-.+-.
T Consensus 231 ~~~d--k~tg~~~--~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~-~~C~C~~g~~l~~d~~~C~ 305 (628)
T 4a0p_A 231 ERAN--KTSGQNR--TIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGG-FVCGCPAHYSLNADNRTCS 305 (628)
T ss_dssp EEEE--TTTCCSC--EEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTE-EEEECSTTCEECTTSSCEE
T ss_pred EEEE--CCCCCce--EEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCCCC-eeEEcCCCcEecccCCcCc
Confidence 6664 3222211 111111111222 222211111 1111222211100100000
Q ss_pred cceee---ccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecc
Q psy14906 329 SNKNL---GIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPE 405 (583)
Q Consensus 329 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 405 (583)
....+ ........... .........+..+... ...........+.+..+....+.|..++.............
T Consensus 306 ~~~~~Ll~s~~~~i~~i~l--~~~~~~~~~l~~~~~~-~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~- 381 (628)
T 4a0p_A 306 APTTFLLFSQKSAINRMVI--DEQQSPDIILPIHSLR-NVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSS- 381 (628)
T ss_dssp CCSSEEEEEETTEEEEECC--CTTCCCCEECCCTTCS-CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC---
T ss_pred cccceeeeeccceEEEEec--ccccCceEEEEehhcC-CceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcc-
Confidence 00000 00000000000 0000000000011100 01111112222345555555666666655432211111000
Q ss_pred cccccCCCCceEEEEccCCcEEE-EEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC-CCcEEEEeecCC--
Q psy14906 406 RCKQAKQSKPTCVYITHCGNFVL-IGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN-LNQIVISGGNDQ-- 481 (583)
Q Consensus 406 ~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg-- 481 (583)
.........+..+++...++.|+ +-+..+.|.+.++. |+....+. .......++|++.| +|.++++-....
T Consensus 382 ~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~-G~~~~~l~----~~~l~~Pr~iavdp~~g~ly~tD~g~~~~ 456 (628)
T 4a0p_A 382 VPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD-GRSVGVVL----KGEQDRPRAVVVNPEKGYMYFTNLQERSP 456 (628)
T ss_dssp ------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCEEEEEE----ECTTCCEEEEEEETTTTEEEEEEEETTEE
T ss_pred cccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC-CCeEEEEE----eCCCCceeeEEEecCCCeEEEeecCCCCC
Confidence 00000124678999999876555 55567889999886 44333331 23345689999999 555555543333
Q ss_pred cEEEEEccCCCCCceEEeec-cCCeeeEEeccCCcEEEEEeC-CceEEEEEccccceEEeec-ccccceeeEEecCCCcE
Q psy14906 482 TVKVWHFKQTGKPPLRSIKL-DNGISFFRTHQESSMLAVCLD-DFTVNIIDIDTCTIIRKLS-GHMGQLTDADFSPDSRW 558 (583)
Q Consensus 482 ~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~-~h~~~v~~l~~s~d~~~ 558 (583)
.|...+++.. ........ -...+.+++.++++.|..+.. .+.|..++++... ...+. ........|+... +..
T Consensus 457 ~I~r~~~dG~--~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~-r~~~~~~~~~~P~glav~~-~~l 532 (628)
T 4a0p_A 457 KIERAALDGT--EREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGAN-RIVLEDSNILQPVGLTVFE-NWL 532 (628)
T ss_dssp EEEEEETTSC--SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCEEEEEEET-TEE
T ss_pred eEEEEeCCCC--CcEEEEeccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCc-eEEEEcCCCCCcEEEEEEC-CEE
Confidence 4555555543 33323322 246789999998777776654 5789999986433 33332 3334567777754 444
Q ss_pred EEEEeCCCeEEEEeCCCccccc
Q psy14906 559 LITASMDCTIRVWDIPSSQLID 580 (583)
Q Consensus 559 l~s~~~d~~i~vw~~~~~~~~~ 580 (583)
..+=.....|...|..+|+...
T Consensus 533 y~tD~~~~~i~~~~k~~G~~~~ 554 (628)
T 4a0p_A 533 YWIDKQQQMIEKIDMTGREGRT 554 (628)
T ss_dssp EEEETTTTEEEEEETTSSSCCE
T ss_pred EEEECCCCeEEEEECcCCCCcE
Confidence 4555556788888887776543
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=3.1e-06 Score=84.57 Aligned_cols=476 Identities=9% Similarity=-0.005 Sum_probs=238.5
Q ss_pred eEEEEeeCCeEEEEecCCcE-EEeecCCCCCCeEEEEeeC---eEEEEE-cCCeEEEEecccee--eeeecccCccEEEE
Q psy14906 45 TLFVTCVGKAFHVYGCNHFK-LLSVSPQHEDDITCLSSDF---FHIYTS-ANNIIYAWRRGIDI--VGTYKGHTSPVHLI 117 (583)
Q Consensus 45 ~~i~~~~~~~i~v~d~~~~~-~~~~~~~h~~~v~~~~~~~---~~~~~~-~~~~i~vw~~~~~~--~~~~~~h~~~v~~i 117 (583)
.++..+..+.|+..|++... ....+...-....+++++. ++..+. ..+.|..+++++.. ...+...-.....+
T Consensus 10 ~~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~Gl 89 (619)
T 3s94_A 10 PLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGL 89 (619)
T ss_dssp CCEEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEE
T ss_pred ceEEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeE
Confidence 35667789999999998653 2222223344567888753 444444 45688888876542 22233222334444
Q ss_pred --ccCCCEEEEE-eCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec--CCeEEEEEcc
Q psy14906 118 --LPFGPHLISV-DEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS--NKKIILHNIL 192 (583)
Q Consensus 118 --s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--d~~i~iw~~~ 192 (583)
.+.++.|+.+ ...+.|.+.+++.......+. ..-.....|++.|.+..|..... .+.|...++.
T Consensus 90 AvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~-----------~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d 158 (619)
T 3s94_A 90 ACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW-----------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 158 (619)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-----------SSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEe-----------CCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC
Confidence 6656655555 446889999987644332222 23345678999997666655543 3577777775
Q ss_pred CCceeEEE-eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCe
Q psy14906 193 TDESLMEF-IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNT 271 (583)
Q Consensus 193 ~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 271 (583)
|.....+ ...-.....|++.+++..+.++-...+.|...|+......... .+.......+++..+ ..+++-...+.
T Consensus 159 -G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~-~~~~~~P~gi~~~~~-~ly~td~~~~~ 235 (619)
T 3s94_A 159 -GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV-KGSLPHPFALTLFED-ILYWTDWSTHS 235 (619)
T ss_dssp -SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC----------CCCEEESSS-EEEEECTTTCS
T ss_pred -CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEE-eCCCCCceEEEEeCC-EEEEecCCCCE
Confidence 4333333 3334578999999976646666666788999999754433332 222223346666554 34444444566
Q ss_pred EEEEEccCCCCCceeeEEeccCCCCCeeEEEe-------------------------eCCCCEEEEeeCCC---------
Q psy14906 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFY-------------------------GNSSDNILSAAGDS--------- 317 (583)
Q Consensus 272 i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~-------------------------~~~~~~l~~~~~dg--------- 317 (583)
|...|. .++ +....+.........+.+. .+.....-+.+.+|
T Consensus 236 V~~~d~--~tg--~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~ 311 (619)
T 3s94_A 236 ILACNK--YTG--EGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKT 311 (619)
T ss_dssp EEEEES--SSC--CCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSC
T ss_pred EEEEEC--CCC--cccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcc
Confidence 666643 221 1112221111112222221 00000011111111
Q ss_pred ---------------cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEec
Q psy14906 318 ---------------TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHT 382 (583)
Q Consensus 318 ---------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (583)
.|+..++...... ...+..+... ...........+.+..+..
T Consensus 312 C~~~~~~~Ll~~~~~~i~~i~l~~~~~~----------------------~~~~~~~~l~-~~~~ld~d~~~~~ly~sD~ 368 (619)
T 3s94_A 312 CKDGATELLLLARRTDLRRISLDTPDFT----------------------DIVLQLEDIR-HAIAIDYDPVEGYIYWTDD 368 (619)
T ss_dssp BCSSCSEEEEEEESSCEEEEESSSTTCC----------------------CEECCCSCCS-SEEEEEEETTTTEEEEEET
T ss_pred cCCCCceEEEEEcccceEEEecCCCccc----------------------eeEEeccccC-ccEEEEEEcCCCeEEEEeC
Confidence 1111111111000 0000000000 0111111122344555555
Q ss_pred CCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCc-EEEEEecCceEEEEEcccCccccccCCCCCCCcccC
Q psy14906 383 GKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGN-FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG 461 (583)
Q Consensus 383 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~ 461 (583)
..+.|..++......... .......+..+++...++ +..+-...+.|.+.++......... ...-..
T Consensus 369 ~~~~I~r~~~~g~~~~~v-------~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~-----~~~l~~ 436 (619)
T 3s94_A 369 EVRAIRRSFIDGSGSQFV-------VTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILI-----SEDLEE 436 (619)
T ss_dssp TTTEEEEEETTSCSCEEE-------ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-----CTTCCS
T ss_pred CCCeEEEEEcCCCccEEE-------EECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEE-----ECCCCC
Confidence 666777776654321111 111114577899997555 4455556788999998754332222 233456
Q ss_pred eeEEEEeCC-CcEEEEe-ecCCcEEEEEccCCCCCceEEee-ccCCeeeEEeccCCcEEEEEeC-CceEEEEEccccceE
Q psy14906 462 VRGVVSDNL-NQIVISG-GNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLD-DFTVNIIDIDTCTII 537 (583)
Q Consensus 462 v~~~~~s~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~ 537 (583)
..+|++.|. |.++++- +....|...+++.. ....... .-.....+++.+++..|..+.. .+.|..++++.....
T Consensus 437 P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~--~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~~ 514 (619)
T 3s94_A 437 PRAIVLDPMVGYMYWTDWGEIPKIERAALDGS--DRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRR 514 (619)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSC--SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE
T ss_pred eeeEEEEcCCCcEEEecCCCCCEEEEEccCCC--ccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCCCceE
Confidence 899999997 4444443 22356666666554 3322222 2346789999987776666654 578999998644332
Q ss_pred EeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCCc
Q psy14906 538 RKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576 (583)
Q Consensus 538 ~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~ 576 (583)
..+...-.....|+...+ ...++-...+.|..-+..+|
T Consensus 515 ~~~~~~l~~P~glav~~~-~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 515 VLVEDKIPHIFGFTLLGD-YVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp EEEECCCCSSCCEEEETT-EEEEECTTSSCEEEEESSSC
T ss_pred EEeccCCCCcEEEEEECC-EEEEeecCCCeEEEEEcCCC
Confidence 222222233456666433 33333334456766666665
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=8.1e-09 Score=104.76 Aligned_cols=344 Identities=10% Similarity=0.062 Sum_probs=189.5
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCC-cce-EEEeeCCCCCEEEEEecCCeEEEEEccCCcee
Q psy14906 120 FGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWN-SCV-NVLEPSPVVDIIGVGLSNKKIILHNILTDESL 197 (583)
Q Consensus 120 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~i-~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~ 197 (583)
.+..|+.++.++.|.-+|..+|+.+.+.......... .... ..+ ..+++ ++..|++++.++.|..+|.++|+.+
T Consensus 65 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~ 140 (668)
T 1kv9_A 65 HDGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKA--RTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAI 140 (668)
T ss_dssp ETTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGG--GGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEE
T ss_pred ECCEEEEECCCCeEEEEECCCChhceEECCCCCcccc--ccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEe
Confidence 3566777778899999999999999888643211000 0000 000 11122 3567888889999999999999999
Q ss_pred EEEeccC----CCeEEEEEecCCCCEEEEEcC------CCcEEEEeCCCCeehhhhhhc---------------------
Q psy14906 198 MEFIQTW----GPVTALSFRTDGPPMMVSGSN------TGHLTVWNLEDRQVENQIKKA--------------------- 246 (583)
Q Consensus 198 ~~~~~~~----~~v~~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~--------------------- 246 (583)
.++.... ..+.+--.-.++ .++.+.. +|.|..+|..+|+.+..+...
T Consensus 141 W~~~~~~~~~~~~~~~~P~v~~~--~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~ 218 (668)
T 1kv9_A 141 WSQQTTDPAKPYSITGAPRVVKG--KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQ 218 (668)
T ss_dssp EEEECSCTTSSCBCCSCCEEETT--EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCC
T ss_pred eeeccCCCCCcceecCCCEEECC--EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCC
Confidence 8876531 111111011244 4555543 588999999999877655210
Q ss_pred ---------cccceEEEEEecCCCEEEEEeCCCe-------------------EEEEEccCCCCCceeeEEec--cCC--
Q psy14906 247 ---------HRKVVTGAHFLYNEPLLVTSSPDNT-------------------LKLWIFDKADGNGRLLRIRE--GHS-- 294 (583)
Q Consensus 247 ---------~~~~v~~~~~~~~~~~l~s~~~d~~-------------------i~~w~~~~~~~~~~~~~~~~--~~~-- 294 (583)
+......+++.|+..+++.+..++. |..+ |..+ ++.+-.++ .|.
T Consensus 219 g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al--D~~t--G~~~W~~~~~~~~~w 294 (668)
T 1kv9_A 219 GDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI--RPDT--GKLAWHYQVTPGDSW 294 (668)
T ss_dssp SSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE--CTTT--CCEEEEEESSTTCCS
T ss_pred ccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE--cCCC--CceeeEeecCCCccc
Confidence 0111224688888888888876653 6666 5443 34443333 232
Q ss_pred -----CCCeeEEEeeCCCC---EEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeee
Q psy14906 295 -----APPNYIQFYGNSSD---NILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSF 366 (583)
Q Consensus 295 -----~~v~~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (583)
.+.....+.. +++ .++.++.+|.++++|..+++.+.........-.. . .+.....++ ..
T Consensus 295 d~~~~~~~~~~d~~~-~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~-----~----~d~~~g~p~---~~ 361 (668)
T 1kv9_A 295 DFTATQQITLAELNI-DGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAE-----K----VDLATGRPV---EA 361 (668)
T ss_dssp CCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEE-----E----ECTTTCCEE---EC
T ss_pred cccCCCCcEEEEecc-CCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccc-----c----cccccCCcc---cc
Confidence 1222222222 454 6889999999999999999876543221100000 0 000000000 00
Q ss_pred ecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEE-----------------
Q psy14906 367 GLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLI----------------- 429 (583)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~----------------- 429 (583)
. .........+.+....+ . ..-..++++|+..++++
T Consensus 362 ~-~~~~~~~~~~~~p~~~G------------------------~--~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~ 414 (668)
T 1kv9_A 362 P-GVRYEKEPIVMWPSPFG------------------------A--HNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFV 414 (668)
T ss_dssp T-TTTCSSSCEEESSCTTC------------------------S--SCSSCCEEETTTTEEEEEEEECCEEECCCGGGCC
T ss_pred c-cccccCCeeEECCCCcc------------------------c--cCCCcceECCCCCEEEEeccccceEeeeeccccc
Confidence 0 00000000011000000 0 01112344444333332
Q ss_pred -------------------EecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccC
Q psy14906 430 -------------------GYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQ 490 (583)
Q Consensus 430 -------------------~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 490 (583)
...+|.|..||+.+++...... +........+...+.+++.++.|+.++.||.++
T Consensus 415 ~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~------~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 415 TRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVP------YPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADK 488 (668)
T ss_dssp CCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEE------ESSSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred cccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEcc------CCCCCcCceeEeCCCEEEEECCcccchhhhhhc
Confidence 1235889999999999877652 222333334445677888899999999999999
Q ss_pred CCCCceEEeeccCCe--eeEEeccCCc-EEEEEe
Q psy14906 491 TGKPPLRSIKLDNGI--SFFRTHQESS-MLAVCL 521 (583)
Q Consensus 491 ~~~~~~~~~~~~~~v--~~~~~s~~~~-~l~~~~ 521 (583)
+ +.+..++....+ .-+.+..+|+ +++++.
T Consensus 489 G--~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 489 G--EALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp C--CEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred C--hhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 9 888888776543 2345556777 555554
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=99.23 E-value=2.3e-08 Score=89.42 Aligned_cols=188 Identities=15% Similarity=0.106 Sum_probs=115.2
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEE-----EEeeccCCceEEecccCCcceEEEeeCCCCCEEEEE-ecCCeEEEEEccCC
Q psy14906 121 GPHLISVDEESNVKVWDIKAEETY-----LELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG-LSNKKIILHNILTD 194 (583)
Q Consensus 121 ~~~l~s~~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~ 194 (583)
|++|+.+. .+.|+.+++...... ..+. .....+..+++++++..|..+ ..++.|..++....
T Consensus 1 ~~~l~~~~-~~~I~~~~~~g~~~~~~~~~~~~~-----------~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~ 68 (267)
T 1npe_A 1 GTHLLFAQ-TGKIERLPLERNTMKKTEAKAFLH-----------IPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG 68 (267)
T ss_dssp CEEEEEEE-EEEEEEEEESSSCBCGGGCEEEEE-----------EEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSC
T ss_pred CcEEEEEc-CCeEEEEEecCcccccccceeeec-----------CCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCC
Confidence 34555555 347888888764321 1111 113467899999976666554 45689999998765
Q ss_pred ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC---CCe
Q psy14906 195 ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP---DNT 271 (583)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~---d~~ 271 (583)
.....+.........+++.+++..++++-...+.|.+++++... ...+..........++++|++..|+.+.. .+.
T Consensus 69 ~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~ 147 (267)
T 1npe_A 69 EPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPK 147 (267)
T ss_dssp CCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCE
T ss_pred CcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcE
Confidence 44333333335789999999766466666677899999987432 22221112245789999997666555544 367
Q ss_pred EEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEE-EeeCCCcEEEEEccc
Q psy14906 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL-SAAGDSTLRIFNTKS 326 (583)
Q Consensus 272 i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg~i~iwd~~~ 326 (583)
|..++++.. ..+.+ ..........+++++ ++..|+ +-...+.|..+|+..
T Consensus 148 I~~~~~dg~--~~~~~--~~~~~~~P~gia~d~-~~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 148 IETSHMDGT--NRRIL--AQDNLGLPNGLTFDA-FSSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp EEEEETTSC--CCEEE--ECTTCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTE
T ss_pred EEEEecCCC--CcEEE--EECCCCCCcEEEEcC-CCCEEEEEECCCCEEEEEecCC
Confidence 777766532 11211 112234568899997 555555 444567888888764
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.2e-11 Score=114.36 Aligned_cols=225 Identities=12% Similarity=0.075 Sum_probs=121.3
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchh
Q psy14906 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 338 (583)
++..+++++.|+.+..||.. +++.+..+.. ..+.+..+.. ++..+++++.||.++.||..+++..........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~----tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKR----TGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETT----TCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECC----CCCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeeccCc
Confidence 56788999999999999654 4555555554 4455554553 566788888999999999988765433211100
Q ss_pred hhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEE
Q psy14906 339 NRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCV 418 (583)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 418 (583)
.. . . ..++
T Consensus 81 ~~------------------------------------------------------------------~-~--~sp~--- 88 (369)
T 2hz6_A 81 EL------------------------------------------------------------------V-Q--ASPC--- 88 (369)
T ss_dssp HH------------------------------------------------------------------H-T--TCSC---
T ss_pred cc------------------------------------------------------------------c-c--cCce---
Confidence 00 0 0 0011
Q ss_pred EEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEE
Q psy14906 419 YITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS 498 (583)
Q Consensus 419 ~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 498 (583)
+. ++..+++++.++.|+.||..+|+....+ ..+. ...++|++..+++++.|+.|+.||..++ +.+..
T Consensus 89 -~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~-----~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG--~~~W~ 155 (369)
T 2hz6_A 89 -RS-SDGILYMGKKQDIWYVIDLLTGEKQQTL-----SSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTR--ELRWN 155 (369)
T ss_dssp -C------CCCCEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSSS--SCCCE
T ss_pred -Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEe-----cCCC----cccccccCCEEEEEecCCEEEEEECCCC--CEEEe
Confidence 01 2446777888999999999999988776 2332 2345678888999999999999999988 66655
Q ss_pred eeccCCeeeEEeccCC---cEEEEEeCCceEEEEEccccceEEeeccccccee-eEEecCCCcEEEE--EeCCCeEEEEe
Q psy14906 499 IKLDNGISFFRTHQES---SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLT-DADFSPDSRWLIT--ASMDCTIRVWD 572 (583)
Q Consensus 499 ~~~~~~v~~~~~s~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~-~l~~s~d~~~l~s--~~~d~~i~vw~ 572 (583)
+.... .....+.++. ..+++++.+|.++.||..+|+.+..... ..++. ...+++++...+. ...++.++.+|
T Consensus 156 ~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~~~dg~~~v~~~~~~~~~l~~ld 233 (369)
T 2hz6_A 156 ATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVWQREGLRKVMHINVAVETLRYLT 233 (369)
T ss_dssp EEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEEEEECTTSSCEEECCEEEEHHHHHHHH
T ss_pred Eeccc-ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC-CCceEEEEEecCCceEeccceeecccceeeee
Confidence 54322 2233344432 5677889999999999999999887763 34443 3455666643210 00133455555
Q ss_pred CCCcc
Q psy14906 573 IPSSQ 577 (583)
Q Consensus 573 ~~~~~ 577 (583)
..+|+
T Consensus 234 ~~tG~ 238 (369)
T 2hz6_A 234 FMSGE 238 (369)
T ss_dssp HHHHH
T ss_pred hhcCC
Confidence 55554
|
| >3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=3.8e-06 Score=83.96 Aligned_cols=460 Identities=8% Similarity=-0.016 Sum_probs=237.7
Q ss_pred EEEEEcCCeEEEEecccee--eeeecccCccEEEE--ccCCCEEEEEeC-CCcEEEEEcCCCcEEEEeeccCCceEEecc
Q psy14906 85 HIYTSANNIIYAWRRGIDI--VGTYKGHTSPVHLI--LPFGPHLISVDE-ESNVKVWDIKAEETYLELSFDNDTFKIMGK 159 (583)
Q Consensus 85 ~~~~~~~~~i~vw~~~~~~--~~~~~~h~~~v~~i--s~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 159 (583)
++.-+..+.|+..++++.. ...+...-.....+ ++.+..|..+.. .+.|..++++.......+..
T Consensus 11 ~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~---------- 80 (619)
T 3s94_A 11 LLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV---------- 80 (619)
T ss_dssp CEEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEEC----------
T ss_pred eEEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEe----------
Confidence 3444567788888876531 22222222334444 676666665544 57788888876532122210
Q ss_pred cCCcceEEEeeCCCCCEEEEE-ecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEc-CCCcEEEEeCCCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVG-LSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS-NTGHLTVWNLEDR 237 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~vwd~~~~ 237 (583)
........+++.+.++.|..+ ...+.|.+.++........+...-.....|++.|.+..++++-. ..+.|...+++.
T Consensus 81 ~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG- 159 (619)
T 3s94_A 81 SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG- 159 (619)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-
T ss_pred CCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-
Confidence 223568899999966655554 55689999998744333333344466789999997653445442 246777777763
Q ss_pred eehhhhhhccccceEEEEEecCCCEEEEEeC-CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC
Q psy14906 238 QVENQIKKAHRKVVTGAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD 316 (583)
Q Consensus 238 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 316 (583)
.....+....-.....+++++++..|+.+.. .+.|...+++. ...+.+ ..+.......+++.. +...++-...
T Consensus 160 ~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG--~~~~~~--~~~~~~~P~gi~~~~--~~ly~td~~~ 233 (619)
T 3s94_A 160 SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG--TNRQAV--VKGSLPHPFALTLFE--DILYWTDWST 233 (619)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC--CEEC-----------CCCEEESS--SEEEEECTTT
T ss_pred CceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC--CccEEE--EeCCCCCceEEEEeC--CEEEEecCCC
Confidence 3222221223456789999997776666643 45666665432 111111 121222345777752 3444444567
Q ss_pred CcEEEEEccccccceeeccchhhhhh------hhhh-cchhc-----cccccC--CC---ccceeeeeccccc-c-----
Q psy14906 317 STLRIFNTKSETSNKNLGIASANRNN------LKRK-NRLEK-----MNEKFI--LP---PVSQFSFGLAREK-D----- 373 (583)
Q Consensus 317 g~i~iwd~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~-----~~~~~~--~~---~~~~~~~~~~~~~-~----- 373 (583)
+.|...|..+++....+......+.. ..+. +...- .-..+. .+ ...+.+....... +
T Consensus 234 ~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~ 313 (619)
T 3s94_A 234 HSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCK 313 (619)
T ss_dssp CSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBC
T ss_pred CEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccC
Confidence 88999998877655443221100000 0000 00000 000000 00 0111111110000 0
Q ss_pred --cccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEE-ecCceEEEEEcccCcccccc
Q psy14906 374 --WNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIG-YSSGHVDRFNIQSGAHRGSY 450 (583)
Q Consensus 374 --~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~ 450 (583)
...++... ....++..++............ ..-..+..+++++.+..|+.. ...+.|+.+++........+
T Consensus 314 ~~~~~~Ll~~-~~~~i~~i~l~~~~~~~~~~~~-----~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~ 387 (619)
T 3s94_A 314 DGATELLLLA-RRTDLRRISLDTPDFTDIVLQL-----EDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVV 387 (619)
T ss_dssp SSCSEEEEEE-ESSCEEEEESSSTTCCCEECCC-----SCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CCCceEEEEE-cccceEEEecCCCccceeEEec-----cccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEE
Confidence 11222222 2334555555433221111111 111457789999866555554 45788999988754433222
Q ss_pred CCCCCCCcccCeeEEEEeCC-CcEEEEeecCCcEEEEEccCCCCCceEEee-ccCCeeeEEeccCCcEEEEEeC--CceE
Q psy14906 451 GHDNQPGHVGGVRGVVSDNL-NQIVISGGNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLD--DFTV 526 (583)
Q Consensus 451 ~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~--dg~i 526 (583)
.........+++.+. +++.++-...+.|.+.+++.. ....... .-.....+++.|....|..... ...|
T Consensus 388 -----~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~--~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I 460 (619)
T 3s94_A 388 -----TAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGT--MRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKI 460 (619)
T ss_dssp -----CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEE
T ss_pred -----ECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCC--eEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEE
Confidence 223356778999874 455556566788999998765 3222222 2357899999997555555443 3577
Q ss_pred EEEEccccceEEeecccccceeeEEecCCCcEEEEEe-CCCeEEEEeCC
Q psy14906 527 NIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS-MDCTIRVWDIP 574 (583)
Q Consensus 527 ~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~-~d~~i~vw~~~ 574 (583)
...+++...........-...+.|++++++..|..+. ..+.|...+++
T Consensus 461 ~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~d 509 (619)
T 3s94_A 461 ERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTD 509 (619)
T ss_dssp EEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEESS
T ss_pred EEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEEEEecC
Confidence 7777653332222233345678899998776666554 44678888875
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=6.8e-08 Score=95.84 Aligned_cols=387 Identities=9% Similarity=-0.042 Sum_probs=201.5
Q ss_pred CCEEEEEeC-CCcEEEEEc-CCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeE
Q psy14906 121 GPHLISVDE-ESNVKVWDI-KAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLM 198 (583)
Q Consensus 121 ~~~l~s~~~-dg~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~ 198 (583)
+..|+.++. ++.|.-+|. .+|+.+.+..................-..++. ++..|++++.++.+..+|.++|+.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 556666676 789999999 89999988764321000000000000011122 35678888889999999999999998
Q ss_pred EEeccCC----CeEEEEEecCCCCEEEEEcC------CCcEEEEeCCCCeehhhhhhcccc-------------------
Q psy14906 199 EFIQTWG----PVTALSFRTDGPPMMVSGSN------TGHLTVWNLEDRQVENQIKKAHRK------------------- 249 (583)
Q Consensus 199 ~~~~~~~----~v~~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~------------------- 249 (583)
++..... .+.+--.-.++ .++.++. ++.|..+|.++++.+.++......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~~g--~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVAKD--TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEETT--EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EecCCCCCccceeccCCEEECC--EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 8763310 12111111244 4555554 789999999999876544211000
Q ss_pred ------------------ceEEEEEecCCCEEEEEeCC----------------CeEEEEEccCCCCCceeeEEeccCCC
Q psy14906 250 ------------------VVTGAHFLYNEPLLVTSSPD----------------NTLKLWIFDKADGNGRLLRIREGHSA 295 (583)
Q Consensus 250 ------------------~v~~~~~~~~~~~l~s~~~d----------------~~i~~w~~~~~~~~~~~~~~~~~~~~ 295 (583)
....+++.++...++.+..+ +.|..+ +..+++..-......|..
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Al--d~~tG~~~W~~~~~~~d~ 295 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGR--DLDTGMAKWGYQKTPHDE 295 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEE--ETTTCCEEEEEESSTTCS
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEE--ecCCCcEEEEecCCCCcc
Confidence 00235667766666665532 246666 444333222222222211
Q ss_pred ----CCeeEEEee--CCCC---EEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeee
Q psy14906 296 ----PPNYIQFYG--NSSD---NILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSF 366 (583)
Q Consensus 296 ----~v~~~~~~~--~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (583)
.+....... .+++ .++.++.+|.+.++|..+++.+-......... ...
T Consensus 296 ~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~-----------------------w~~ 352 (571)
T 2ad6_A 296 WDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVN-----------------------VFK 352 (571)
T ss_dssp SCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC-----------------------SEE
T ss_pred cccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcc-----------------------ccc
Confidence 111212211 1563 57788889999999999988765432211000 000
Q ss_pred ecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcc
Q psy14906 367 GLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446 (583)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 446 (583)
..... ....+... +................... ..-..++++|+..++++...+....++.....
T Consensus 353 ~~d~~--~g~p~~~~---------~~~~~~~~~~~~~~P~~~Gg--~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~-- 417 (571)
T 2ad6_A 353 KVDLK--TGTPVRDP---------EFATRMDHKGTNICPSAMGF--HNQGVDSYDPESRTLYAGLNHICMDWEPFMLP-- 417 (571)
T ss_dssp EECTT--TCSEEECG---------GGCCCTTCCEEEESSCTTCS--SCSCBCEEETTTTEEEEEEECEEEEEEECCCC--
T ss_pred ccccc--CCceeccc---------ccCCCCCCCceEECCCCccc--cCCCCceECCCCCEEEEEchhccccccccccc--
Confidence 00000 00000000 00000000000000000000 12246789999999999887766655543321
Q ss_pred ccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceE
Q psy14906 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTV 526 (583)
Q Consensus 447 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 526 (583)
+..- ...-+.-..+..+|.+. + ...+|.|..||+.++ +.+........+....+...+..+++++.|+.+
T Consensus 418 ---~~~g--~~~~g~~~~~~~~~~~~-~--~~~~g~l~a~D~~tG--~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l 487 (571)
T 2ad6_A 418 ---YRAG--QFFVGATLAMYPGPNGP-T--KKEMGQIRAFDLTTG--KAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYL 487 (571)
T ss_dssp ---CCTT--SCCCCEEEEEEECTTST-T--SCCCEEEEEECTTTC--CEEEEEEESSCCCSBCEEETTTEEEEECTTSEE
T ss_pred ---cccC--CccccccceeccCcccc-C--CCCCCeEEEEECCCC--CEEEEecCCCCccceeEEECCCEEEEEcCCCeE
Confidence 1000 00011111222233221 0 024688999999988 888777766555554455567778889999999
Q ss_pred EEEEccccceEEeecccccc-eeeEEecCCCcEEEE
Q psy14906 527 NIIDIDTCTIIRKLSGHMGQ-LTDADFSPDSRWLIT 561 (583)
Q Consensus 527 ~i~d~~~~~~~~~~~~h~~~-v~~l~~s~d~~~l~s 561 (583)
+.+|.++|+++.+++..... -.-+.+..+|+.++.
T Consensus 488 ~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 488 KALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp EEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred EEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 99999999999887743321 122445577875543
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=99.19 E-value=2.6e-08 Score=98.67 Aligned_cols=80 Identities=9% Similarity=-0.062 Sum_probs=56.4
Q ss_pred CCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccce-eeEEecCCCcE
Q psy14906 480 DQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQL-TDADFSPDSRW 558 (583)
Q Consensus 480 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v-~~l~~s~d~~~ 558 (583)
+|.|..||+.++ +.+.......+...-.+...+.++++++.|+.++.||.++|+++.+++.....+ .-+.|..+|+.
T Consensus 452 ~G~l~A~D~~tG--~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 452 LGQIKAYNAITG--DYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp CEEEEEECTTTC--CEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cCeEEEEECCCC--CEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEE
Confidence 478999999988 777777655444333344467788889999999999999999998876443222 23556678864
Q ss_pred -EEE
Q psy14906 559 -LIT 561 (583)
Q Consensus 559 -l~s 561 (583)
+++
T Consensus 530 yv~~ 533 (599)
T 1w6s_A 530 YVAI 533 (599)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 443
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=99.15 E-value=7e-08 Score=86.24 Aligned_cols=243 Identities=9% Similarity=0.064 Sum_probs=145.5
Q ss_pred CcEEEEeCCCCeehh----hhhhccccceEEEEEecCCCEEEEEe-CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEE
Q psy14906 227 GHLTVWNLEDRQVEN----QIKKAHRKVVTGAHFLYNEPLLVTSS-PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ 301 (583)
Q Consensus 227 g~i~vwd~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~ 301 (583)
+.|+.+++....... .+.......+..++|++++..|+.+. ..+.|..++.+.. . ..............++
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~--~--~~~~~~~~~~~p~~ia 85 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG--E--PTTIIRQDLGSPEGIA 85 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSC--C--CEEEECTTCCCEEEEE
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCC--C--cEEEEECCCCCccEEE
Confidence 478888887544321 11011234567999999766555544 5678888866422 1 1222222224668899
Q ss_pred EeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEe
Q psy14906 302 FYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIH 381 (583)
Q Consensus 302 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (583)
+.+..+...++-...+.|.++++..... ..+
T Consensus 86 ~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~------------------------------------------------ 116 (267)
T 1npe_A 86 LDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVL------------------------------------------------ 116 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSC-EEE------------------------------------------------
T ss_pred EEecCCeEEEEECCCCEEEEEEcCCCCE-EEE------------------------------------------------
Confidence 9873344444445567888888753211 000
Q ss_pred cCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec---CceEEEEEcccCccccccCCCCCCCc
Q psy14906 382 TGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS---SGHVDRFNIQSGAHRGSYGHDNQPGH 458 (583)
Q Consensus 382 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~h 458 (583)
.. ........++++|++..|+++.. .+.|..+++.... ...+. ...
T Consensus 117 --------~~------------------~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~----~~~ 165 (267)
T 1npe_A 117 --------FD------------------TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILA----QDN 165 (267)
T ss_dssp --------EC------------------SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEE----CTT
T ss_pred --------EE------------------CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEE----ECC
Confidence 00 00034678999997666655553 4688888875432 22221 122
Q ss_pred ccCeeEEEEeCCCcEE-EEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEe-CCceEEEEEccccce
Q psy14906 459 VGGVRGVVSDNLNQIV-ISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCL-DDFTVNIIDIDTCTI 536 (583)
Q Consensus 459 ~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~ 536 (583)
......+++++++..| ++-...+.|.++|+... ..............++. ++..|.++. ..+.|..+|..+++.
T Consensus 166 ~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~--~~~~~~~~~~~P~gi~~--d~~~lyva~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 166 LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP--GRRKVLEGLQYPFAVTS--YGKNLYYTDWKTNSVIAMDLAISKE 241 (267)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE--EEEEEEECCCSEEEEEE--ETTEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC--ceEEEecCCCCceEEEE--eCCEEEEEECCCCeEEEEeCCCCCc
Confidence 3467899999987655 44456678999998764 33333333334456655 345555544 568999999999998
Q ss_pred EEeecccc-cceeeEEecCCCc
Q psy14906 537 IRKLSGHM-GQLTDADFSPDSR 557 (583)
Q Consensus 537 ~~~~~~h~-~~v~~l~~s~d~~ 557 (583)
+..+.... .....+++.|++.
T Consensus 242 ~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 242 MDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEECCSSCCCCCCEEEECSCC
T ss_pred eEEEccccccccceeeecCccC
Confidence 88876433 2478888888865
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=99.15 E-value=8.4e-09 Score=88.25 Aligned_cols=196 Identities=9% Similarity=-0.022 Sum_probs=138.2
Q ss_pred ceeeeeeeeeee-cCcc--cEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeE--EEEeeCe--EEEEEc
Q psy14906 18 IFLRHRALGYVS-NHLP--VVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDIT--CLSSDFF--HIYTSA 90 (583)
Q Consensus 18 ~~~~~~~~g~~~-~~~~--~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~--~~~~~~~--~~~~~~ 90 (583)
+-.+.+++..+. ...+ +-+.| +++.++++.+.++.|+++|+++++.+..+ -..... .+++++. +++.-.
T Consensus 39 ~~~~~~Vv~~~phd~~~ftqGL~~--~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g~~Ly~ltw~ 114 (268)
T 3nok_A 39 VRRVAHIIREYPHATNAFTQGLVF--HQGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDGERLYQLTWT 114 (268)
T ss_dssp EEEEEEEEEEEECCTTCCEEEEEE--ETTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECSSCEEEEESS
T ss_pred cccceEEEEEEcCCCccccceEEE--ECCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeCCEEEEEEcc
Confidence 334456777664 3333 46677 46777777778888999999999888776 222332 3677663 333336
Q ss_pred CCeEEEEec-cceeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEe
Q psy14906 91 NNIIYAWRR-GIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLE 169 (583)
Q Consensus 91 ~~~i~vw~~-~~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 169 (583)
++.+.++|. +.+.+.++.--... ..+++|++.|+.+..++.|.++|.++.+.+.++...... ..-..++.+.
T Consensus 115 ~~~v~V~D~~Tl~~~~ti~~~~eG-wGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g------~~v~~lNeLe 187 (268)
T 3nok_A 115 EGLLFTWSGMPPQRERTTRYSGEG-WGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRG------QPVELINELE 187 (268)
T ss_dssp SCEEEEEETTTTEEEEEEECSSCC-CCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETT------EECCCEEEEE
T ss_pred CCEEEEEECCcCcEEEEEeCCCce-eEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCC------cccccccccE
Confidence 889999996 45777777643222 456789999888877899999999999999988754211 1123456677
Q ss_pred eCCCCCEEEEEecCCeEEEEEccCCceeEEEecc-------------CCCeEEEEEecCCCCEEEEEcC
Q psy14906 170 PSPVVDIIGVGLSNKKIILHNILTDESLMEFIQT-------------WGPVTALSFRTDGPPMMVSGSN 225 (583)
Q Consensus 170 ~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~l~s~~~ 225 (583)
|. +|+..|....+..|.+.|.++++.+..+... ....+.|+|+|+++.++++|-.
T Consensus 188 ~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 188 CA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp EE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred Ee-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 77 7776666666889999999999998887632 1356899999998878887754
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=9.5e-08 Score=94.60 Aligned_cols=208 Identities=9% Similarity=-0.022 Sum_probs=120.3
Q ss_pred CCEEEEEeC-CCcEEEEEc-CCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCE----EEEEecCCeEEEEEccCC
Q psy14906 121 GPHLISVDE-ESNVKVWDI-KAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDI----IGVGLSNKKIILHNILTD 194 (583)
Q Consensus 121 ~~~l~s~~~-dg~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~----l~~~~~d~~i~iw~~~~~ 194 (583)
+..|+.++. ++.|.-+|. .+|+.+.+.....................++++|.+.. |++++.|+.+..+|.++|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 556777777 889999999 89999988864321100000000000122445443444 888889999999999999
Q ss_pred ceeEEEeccCC----CeEE-EEEecCCCCEEEEEc------CCCcEEEEeCCCCeehhhhhhcccc--------------
Q psy14906 195 ESLMEFIQTWG----PVTA-LSFRTDGPPMMVSGS------NTGHLTVWNLEDRQVENQIKKAHRK-------------- 249 (583)
Q Consensus 195 ~~~~~~~~~~~----~v~~-~~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~~~~-------------- 249 (583)
+.+.+...... .+.+ ... .++ .++.++ .+|.|+.+|.++|+.+..+......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v-~~g--~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYV-VKD--KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEE-ETT--EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CEEEeecCCCCCccceeecCCEE-ECC--EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence 99988764310 1221 111 244 455554 3789999999999876544211100
Q ss_pred ----------------------ce-EEEEEecCCCEEEEEeCCC----------------eEEEEEccCCCCCceeeEEe
Q psy14906 250 ----------------------VV-TGAHFLYNEPLLVTSSPDN----------------TLKLWIFDKADGNGRLLRIR 290 (583)
Q Consensus 250 ----------------------~v-~~~~~~~~~~~l~s~~~d~----------------~i~~w~~~~~~~~~~~~~~~ 290 (583)
.+ ..+++.++..+++.+..++ .|..+ +..+++..-....
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Al--d~~TG~~~W~~q~ 296 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR--DADTGEAKFGYQK 296 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE--ETTTCCEEEEEES
T ss_pred cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEE--eCCCCceeeEeec
Confidence 00 1345667777777766543 56666 4443333333333
Q ss_pred ccCCC----CCee-EEEee--CCC---CEEEEeeCCCcEEEEEccccccceee
Q psy14906 291 EGHSA----PPNY-IQFYG--NSS---DNILSAAGDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 291 ~~~~~----~v~~-~~~~~--~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~ 333 (583)
..|.. .... +.+.. .++ ..++.++.+|.+.++|..+++.+-..
T Consensus 297 ~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 297 TPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp STTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 33321 1111 11211 246 46777889999999999999876554
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=4.3e-08 Score=97.30 Aligned_cols=162 Identities=11% Similarity=0.011 Sum_probs=107.7
Q ss_pred EEEEccCCcEEEEEecC----------------ceEEEEEcccCccccccCCCCC-----CCcccCeeEEEEeCCCc---
Q psy14906 417 CVYITHCGNFVLIGYSS----------------GHVDRFNIQSGAHRGSYGHDNQ-----PGHVGGVRGVVSDNLNQ--- 472 (583)
Q Consensus 417 ~~~~s~~~~~l~~~~~d----------------g~i~i~d~~~~~~~~~~~~~~~-----~~h~~~v~~~~~s~~~~--- 472 (583)
.+++.++...+++++.+ +.|..+|..+|+.+..+..... .....++. +...++|+
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~ 317 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTP 317 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEE
Confidence 35566666666666532 3589999999988776632100 01112221 22234674
Q ss_pred EEEEeecCCcEEEEEccCCCCCceEEeeccC--------------Ce--------------------------eeEEecc
Q psy14906 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDN--------------GI--------------------------SFFRTHQ 512 (583)
Q Consensus 473 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--------------~v--------------------------~~~~~s~ 512 (583)
.++.++.+|.+.++|..++ +.+...+... ++ ..++++|
T Consensus 318 ~v~~~~~~G~l~~lD~~tG--~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp 395 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENG--NLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDP 395 (571)
T ss_dssp EEEEECTTSEEEEEETTTC--CEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEET
T ss_pred EEEEeCCCcEEEEEECCCC--CEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECC
Confidence 5778888999999999988 7665554321 11 2457888
Q ss_pred CCcEEEEEe-------------------------------------CCceEEEEEccccceEEeecccccceeeEEecCC
Q psy14906 513 ESSMLAVCL-------------------------------------DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPD 555 (583)
Q Consensus 513 ~~~~l~~~~-------------------------------------~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d 555 (583)
+..++++.. .+|.|..||..+++.+.++.. ...+....+...
T Consensus 396 ~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~-~~~~~~~~~~t~ 474 (571)
T 2ad6_A 396 ESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWE-KFAAWGGTLYTK 474 (571)
T ss_dssp TTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEET
T ss_pred CCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecC-CCCccceeEEEC
Confidence 877776653 357899999999998877763 333444334445
Q ss_pred CcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 556 SRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 556 ~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
+..++.++.|+.|+.||.++|+++-++
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCEEEEE
Confidence 667777999999999999999988655
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=99.09 E-value=8.7e-08 Score=82.10 Aligned_cols=196 Identities=11% Similarity=-0.007 Sum_probs=134.3
Q ss_pred eeeeeeeeee-cCcc--cEEEEEeCCCceEEEEeeCC--eEEEEecCCcEEEeecCCCCCCe-EEEEeeCeEEEE--EcC
Q psy14906 20 LRHRALGYVS-NHLP--VVARFIRRRKETLFVTCVGK--AFHVYGCNHFKLLSVSPQHEDDI-TCLSSDFFHIYT--SAN 91 (583)
Q Consensus 20 ~~~~~~g~~~-~~~~--~~~~~~p~~~~~~i~~~~~~--~i~v~d~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~--~~~ 91 (583)
..++++..+. ...+ +-+.|+ + ..++++++..+ .|+++|+++++.+..+.-..... -.+++++..+.. -.+
T Consensus 29 ~~~~vv~~~phd~~~ftqGL~~~-~-~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 29 YDYQIVHSYPHDTKAFTEGFFYR-N-GYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEEEEECCTTCEEEEEEEE-T-TEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS
T ss_pred cceEEEEEecCCCCcccceEEEE-C-CEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC
Confidence 3467777654 3333 667786 3 46666666544 89999999999988775433221 246666643333 358
Q ss_pred CeEEEEec-cceeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEee
Q psy14906 92 NIIYAWRR-GIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEP 170 (583)
Q Consensus 92 ~~i~vw~~-~~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 170 (583)
+.+.++|. +.+.+.++.-.... ..+++|++.|+....++.|.++|.++.+.+.++...... ..-..++.+.|
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~~eG-~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g------~~~~~lNELe~ 179 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYDGEG-WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG------EELPELNELEW 179 (262)
T ss_dssp SEEEEEETTTCCEEEEEECSSCC-CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT------EECCCEEEEEE
T ss_pred CEEEEEECccCcEEEEEECCCCc-eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC------ccccccceeEE
Confidence 89999997 45667776643222 356788888887766788999999999999888753110 01134456777
Q ss_pred CCCCCEEEEEecCCeEEEEEccCCceeEEEecc------------CCCeEEEEEecCCCCEEEEEcC
Q psy14906 171 SPVVDIIGVGLSNKKIILHNILTDESLMEFIQT------------WGPVTALSFRTDGPPMMVSGSN 225 (583)
Q Consensus 171 s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~~l~s~~~ 225 (583)
. +|+..+....+..|.+.|.++++.+..+... ....+.|+|+|+++.++++|-.
T Consensus 180 ~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 180 V-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp E-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred E-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 6 7776666667889999999999998887632 1356899999998856666643
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=99.08 E-value=3.4e-07 Score=90.94 Aligned_cols=241 Identities=11% Similarity=0.030 Sum_probs=127.1
Q ss_pred eeCeEEEEEcCCeEEEEec-cceeeeeecccCcc--------E-EEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeecc
Q psy14906 81 SDFFHIYTSANNIIYAWRR-GIDIVGTYKGHTSP--------V-HLILPFGPHLISVDEESNVKVWDIKAEETYLELSFD 150 (583)
Q Consensus 81 ~~~~~~~~~~~~~i~vw~~-~~~~~~~~~~h~~~--------v-~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 150 (583)
.++++.+++.++.|.-+|. +++.+-.+...... + ..+...+..|+.++.|+.|.-+|.++|+.+.+....
T Consensus 67 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~ 146 (582)
T 1flg_A 67 SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFA 146 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECS
T ss_pred ECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCCEEEEEECCCCCEEeeecCC
Confidence 4666666666455777785 45554444332211 0 111235667888888999999999999999887643
Q ss_pred CCceEEecccCCcceEEEeeCCCCC-EEEEEec------CCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEE
Q psy14906 151 NDTFKIMGKRWNSCVNVLEPSPVVD-IIGVGLS------NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG 223 (583)
Q Consensus 151 ~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~------d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 223 (583)
...... .....++.. .=..+++ .++++.. ++.|..+|.++|+.+....... +.+.|++. .....
T Consensus 147 ~~~~~~--~~~~sP~v~-~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~-----~~~~p~~~-~~~~~ 217 (582)
T 1flg_A 147 DHGAGY--TMTGAPTIV-KDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVE-----GHMGRLNG-KDSTV 217 (582)
T ss_dssp CGGGTC--BCCSCCEEE-ECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESST-----TCEEEETT-EEEEE
T ss_pred CCCcCc--ccccCCEEe-CCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCc-----cccccccC-ccccc
Confidence 110000 000111110 0001233 5656543 7899999999999998754321 12234333 33333
Q ss_pred cCCCcEEEEeCC----CCeehhhhhhccccceEEEEEecCCCEEEEEeC--------------------C----CeEEEE
Q psy14906 224 SNTGHLTVWNLE----DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP--------------------D----NTLKLW 275 (583)
Q Consensus 224 ~~dg~i~vwd~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--------------------d----~~i~~w 275 (583)
..+.....|..+ +++...-. .+....-..+++.|+..+++.+.. | +.|..+
T Consensus 218 ~g~~g~~~w~~~~~~~~g~~~~~~-~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~Al 296 (582)
T 1flg_A 218 TGDVKAPSWPDDRNSPTGKVESWS-HGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGV 296 (582)
T ss_dssp SSCTTCTTSCBCTTSTTSBCGGGG-GCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEE
T ss_pred ccccccccCCCccccccccccccc-cCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEE
Confidence 222233444432 23321111 111122235677777777776553 2 466666
Q ss_pred EccCCCCCceeeEEeccCCC----CCee-EEEee--CCC---CEEEEeeCCCcEEEEEccccccceee
Q psy14906 276 IFDKADGNGRLLRIREGHSA----PPNY-IQFYG--NSS---DNILSAAGDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~----~v~~-~~~~~--~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~ 333 (583)
|..+++..-......|.. .+.. +.+.. .++ ..++.++.+|.++++|..+++.+-..
T Consensus 297 --D~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 362 (582)
T 1flg_A 297 --DPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAF 362 (582)
T ss_dssp --CTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred --eCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccc
Confidence 444333333232333321 1111 22221 256 37888999999999999999876554
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=7.7e-08 Score=83.69 Aligned_cols=160 Identities=8% Similarity=-0.102 Sum_probs=108.0
Q ss_pred ceEEEeeCCCCCEEEEEec--CCeEEEEEccCCceeEEEeccC-CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeeh
Q psy14906 164 CVNVLEPSPVVDIIGVGLS--NKKIILHNILTDESLMEFIQTW-GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE 240 (583)
Q Consensus 164 ~i~~~~~s~~~~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 240 (583)
....++|++|+.+.++.+. ++.|.++|+.+++.+..+.... .....+++. +..+.++.-.++.+.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 4678999998755554433 5799999999999998876332 223345554 4436666677899999999999998
Q ss_pred hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC--C---CCCeeEEEeeCCCCEEEEeeC
Q psy14906 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH--S---APPNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 241 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~--~---~~v~~~~~~~~~~~~l~~~~~ 315 (583)
.++..+ ... ...+++||+.++++..++.+.++| .. ..+....+.-. . ..++.+.|. ++...+....
T Consensus 100 ~~i~~g-~~~--g~glt~Dg~~l~vs~gs~~l~viD--~~--t~~v~~~I~Vg~~~~p~~~~nele~~--dg~lyvn~~~ 170 (266)
T 2iwa_A 100 KNFTHQ-MKD--GWGLATDGKILYGSDGTSILYEID--PH--TFKLIKKHNVKYNGHRVIRLNELEYI--NGEVWANIWQ 170 (266)
T ss_dssp EEEECC-SSS--CCEEEECSSSEEEECSSSEEEEEC--TT--TCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETT
T ss_pred EEEECC-CCC--eEEEEECCCEEEEECCCCeEEEEE--CC--CCcEEEEEEECCCCcccccceeEEEE--CCEEEEecCC
Confidence 888433 122 234667888777777788888884 43 33444443321 1 235677876 5654445546
Q ss_pred CCcEEEEEccccccceeec
Q psy14906 316 DSTLRIFNTKSETSNKNLG 334 (583)
Q Consensus 316 dg~i~iwd~~~~~~~~~~~ 334 (583)
++.|.+.|..+++....+.
T Consensus 171 ~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 171 TDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp SSEEEEEETTTCCEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEE
Confidence 7899999999998777664
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=99.03 E-value=5.5e-05 Score=80.98 Aligned_cols=471 Identities=11% Similarity=0.069 Sum_probs=235.7
Q ss_pred CCeEEEEecCCcEEEeecC-CCCCCeEEEEeeCeEEEEEcCCeEEEEeccceeeeee--cccCccEEEE--c--cC----
Q psy14906 52 GKAFHVYGCNHFKLLSVSP-QHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTY--KGHTSPVHLI--L--PF---- 120 (583)
Q Consensus 52 ~~~i~v~d~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~--~~h~~~v~~i--s--~~---- 120 (583)
.+.|++.+.+....+.... +....|.+.+.++..++.+.++.+.++.++...+... ..-...|.|+ . ++
T Consensus 491 ~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~~~vvva~g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~ 570 (1158)
T 3ei3_A 491 SASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGL 570 (1158)
T ss_dssp SSCEEEEESSSCCEEEEECCTTCCCCCEEEECSSEEEEEETTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTC
T ss_pred cCEEEEEECCCCeEEEEEECCCCCEEEEEEeCCCEEEEEECCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCccc
Confidence 4456777766555554444 3455687777755444444578888887642111111 1235678887 2 22
Q ss_pred CCEEEEEeC-CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEc--cCCcee
Q psy14906 121 GPHLISVDE-ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNI--LTDESL 197 (583)
Q Consensus 121 ~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~--~~~~~~ 197 (583)
++++|.|.. |++++|+++.+.+.+....+... .....+.-+.+ ....+|.+|..||.+.-+.+ .+|+..
T Consensus 571 s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~-------~~p~si~l~~~-~~~~~L~igl~dG~l~~~~~d~~tg~l~ 642 (1158)
T 3ei3_A 571 SPLCAIGLWTDISARILKLPSFELLHKEMLGGE-------IIPRSILMTTF-ESSHYLLCALGDGALFYFGLNIETGLLS 642 (1158)
T ss_dssp CSEEEEEETTTTEEEEEETTTCCEEEEEECCSS-------CCEEEEEEEEE-TTEEEEEEEETTSEEEEEEECTTTCCEE
T ss_pred ccEEEEEECCCCEEEEEECCCCCeEEEEECCCC-------CCCcEEEEEEe-CCCcEEEEEeCCCeEEEEEEcCCCCccc
Confidence 479999996 99999999998777765543210 01122333333 23457889999998766555 345443
Q ss_pred EE---EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccce-EEEEEecC--CCEEEEEeCCCe
Q psy14906 198 ME---FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVV-TGAHFLYN--EPLLVTSSPDNT 271 (583)
Q Consensus 198 ~~---~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v-~~~~~~~~--~~~l~s~~~d~~ 271 (583)
.. +-+ ..++.-..|...+..-+++.+ +.-..++.-+ ++....- -....+ ....|+.. ..-++..+ ++.
T Consensus 643 d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~-~~l~~s~--l~~~~v~~~~~F~se~~~~g~v~~~-~~~ 716 (1158)
T 3ei3_A 643 DRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSN-HKLVFSN--VNLKEVNYMCPLNSDGYPDSLALAN-NST 716 (1158)
T ss_dssp EEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESS-SSEEEEE--BSSSCCCEEEEECCSSSTTEEEEEC-SSC
T ss_pred cceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcC-CceEEec--cChHHhceEeccCcccCCCcEEEEc-CCc
Confidence 22 223 356655556555543344444 3344444433 3322111 111223 23345332 12344443 456
Q ss_pred EEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhc
Q psy14906 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEK 351 (583)
Q Consensus 272 i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (583)
++|..++.. ..-.++.+.- ...+..++++|. .+.++.+..+. ..++...... ..... ..............
T Consensus 717 LrI~~i~~~--~~~~~~~ipL-~~Tprri~y~~~-~~~~~v~~~~~--~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~ 787 (1158)
T 3ei3_A 717 LTIGTIDEI--QKLHIRTVPL-YESPRKICYQEV-SQCFGVLSSRI--EVQDTSGGTT--ALRPS-ASTQALSSSVSSSK 787 (1158)
T ss_dssp EEEEEECCS--SSEEEEEEEC-SSEEEEEEEEGG-GTEEEEEEEEE--EEECSSSSEE--ESSCC-HHHHCSEEEECCCC
T ss_pred eEEEEeccc--CCeeEEEEeC-CCCceEEEEcCC-CCEEEEEEEec--cccccccccc--hhhhh-hhhhhhhhcccccc
Confidence 999977543 2223333332 356789999984 55555443322 1222211000 00000 00000000000000
Q ss_pred cccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEE---EccC-CcEE
Q psy14906 352 MNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVY---ITHC-GNFV 427 (583)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~s~~-~~~l 427 (583)
........+... +... ...+.+++.|..+......... .....+.+++ |..+ ..++
T Consensus 788 ~~~~~~~~~~~~--~g~~------------~~~s~i~lidp~t~~~i~~~~l------~~nE~~~sv~~v~~~~~~~~~l 847 (1158)
T 3ei3_A 788 LFSSSTAPHETS--FGEE------------VEVHNLLIIDQHTFEVLHAHQF------LQNEYALSLVSCKLGKDPNTYF 847 (1158)
T ss_dssp CC------------CCCE------------EEEEEEEEEETTTCCEEEEEEC------CTTEEEEEEEEECCTTCCCCEE
T ss_pred cccccccCchhh--cCCc------------eeeEEEEEEeCCCCeEEEEEeC------CCCcceEEEEEEEEccCCCEEE
Confidence 000000000000 0000 0122345555443322111000 0012233433 3322 4688
Q ss_pred EEEe----------cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceE
Q psy14906 428 LIGY----------SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLR 497 (583)
Q Consensus 428 ~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 497 (583)
++|+ ..|.|++|++..++...... ....+.|++++-- +|++++.. ...|++|++... +.++
T Consensus 848 vVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~----~~v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~~--~~L~ 918 (1158)
T 3ei3_A 848 IVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAE----KEVKGAVYSMVEF-NGKLLASI--NSTVRLYEWTTE--KELR 918 (1158)
T ss_dssp EEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEE----EEESSCEEEEEEE-TTEEEEEE--TTEEEEEEECTT--SCEE
T ss_pred EEEeeecCCCCCCCCceEEEEEEEECCEEEEEEE----EEcCCcCEEEeee-CCEEEEEc--CCEEEEEECCCC--ceEE
Confidence 8887 35899999998543332221 2456788888754 45555544 368999999876 4444
Q ss_pred -EeeccCCeeeEEeccCCcEEEEEeCCceEEEEEcc--ccceEEee-cccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 498 -SIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID--TCTIIRKL-SGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 498 -~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~-~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
.......+..+.....+.++++|+.-..+.++..+ .++..... ..+...++++.|-.++ .++.+..+|.+.+...
T Consensus 919 ~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~ 997 (1158)
T 3ei3_A 919 TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQK 997 (1158)
T ss_dssp EEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEE
T ss_pred EEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEec
Confidence 11122234444444568899999988888776554 33333222 2245568888886554 5677899999999877
Q ss_pred CC
Q psy14906 574 PS 575 (583)
Q Consensus 574 ~~ 575 (583)
..
T Consensus 998 ~~ 999 (1158)
T 3ei3_A 998 DS 999 (1158)
T ss_dssp CT
T ss_pred CC
Confidence 54
|
| >4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=2.9e-05 Score=77.68 Aligned_cols=452 Identities=8% Similarity=-0.031 Sum_probs=239.1
Q ss_pred cccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEee---CeEEEEE-cCCeEEEEeccceeeeee
Q psy14906 32 LPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSD---FFHIYTS-ANNIIYAWRRGIDIVGTY 107 (583)
Q Consensus 32 ~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~---~~~~~~~-~~~~i~vw~~~~~~~~~~ 107 (583)
.|..+.|.+.....+++-...+.|..++++.......+.........+|+| +++..+. ..+.|.+.++++.....+
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l 117 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVL 117 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEE
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEE
Confidence 467888988777766665578899999987643333333222345567775 3454444 457899999876544333
Q ss_pred c-ccCccEEEE--ccCCCEEEEEeC--CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe-
Q psy14906 108 K-GHTSPVHLI--LPFGPHLISVDE--ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL- 181 (583)
Q Consensus 108 ~-~h~~~v~~i--s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~- 181 (583)
. ..-..-..| .|...+|..... .+.|...+++..... .+. ..-.....|+++++++.|..+.
T Consensus 118 ~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l~-----------~~~~~P~GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 118 VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TLV-----------PNVGRANGLTIDYAKRRLYWTDL 185 (628)
T ss_dssp ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEE-----------CSCSSEEEEEEETTTTEEEEEET
T ss_pred EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EEE-----------CCCCCcceEEEccccCEEEEEEC
Confidence 2 222223444 665556665542 467777777654332 222 2345678999999877776664
Q ss_pred cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhh----------ccc---
Q psy14906 182 SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKK----------AHR--- 248 (583)
Q Consensus 182 ~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~----------~~~--- 248 (583)
..+.|...|+..... ..+.........+++.. +. ++++-...+.|...|..+++....+.. .|.
T Consensus 186 ~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~-ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q 262 (628)
T 4a0p_A 186 DTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DY-IYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQ 262 (628)
T ss_dssp TTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TE-EEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGS
T ss_pred CCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CE-EEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeeccc
Confidence 457899999865433 33443334567888865 33 666666678888888766542221100 000
Q ss_pred ----------cceEEEEEe-c----------------CC-------CEEEEEeCCCeEEEEEccCCCCCceeeEEec-cC
Q psy14906 249 ----------KVVTGAHFL-Y----------------NE-------PLLVTSSPDNTLKLWIFDKADGNGRLLRIRE-GH 293 (583)
Q Consensus 249 ----------~~v~~~~~~-~----------------~~-------~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~-~~ 293 (583)
+....++.. | |+ .+|+.+. ...|+-..++... ... ..+. ..
T Consensus 263 ~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~-~~~i~~i~l~~~~-~~~--~~l~~~~ 338 (628)
T 4a0p_A 263 SGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQ-KSAINRMVIDEQQ-SPD--IILPIHS 338 (628)
T ss_dssp CCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEE-TTEEEEECCCTTC-CCC--EECCCTT
T ss_pred ccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeeec-cceEEEEeccccc-Cce--EEEEehh
Confidence 001011111 1 11 1222221 2233333222110 001 1111 11
Q ss_pred CCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccc
Q psy14906 294 SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKD 373 (583)
Q Consensus 294 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (583)
-..+..+.|.+.++..+++=...+.|+.+++........+.... ........ +...+....
T Consensus 339 ~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~---------------~~~~~~~~----p~glAvD~~ 399 (628)
T 4a0p_A 339 LRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSV---------------PSQNLEIQ----PYDLSIDIY 399 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-----------------------CCC----EEEEEEETT
T ss_pred cCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEccc---------------ccccccCC----cceEEeecc
Confidence 23467788887444444444456778777765432211110000 00000011 112222222
Q ss_pred cccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe-cCc--eEEEEEcccCcccccc
Q psy14906 374 WNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSG--HVDRFNIQSGAHRGSY 450 (583)
Q Consensus 374 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg--~i~i~d~~~~~~~~~~ 450 (583)
..++..+....+.|.+.+.......... .........+++.|...+|+... ... .|...++.........
T Consensus 400 ~~nLY~td~~~~~I~v~~~~G~~~~~l~-------~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~ 472 (628)
T 4a0p_A 400 SRYIYWTCEATNVINVTRLDGRSVGVVL-------KGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLF 472 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTSCEEEEEE-------ECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEE
T ss_pred CCeEEEEcCCCCEEEEEECCCCeEEEEE-------eCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEE
Confidence 3456666677778888777653221111 11125688999999544444433 222 6777776533332222
Q ss_pred CCCCCCCcccCeeEEEEeCCCcEEEEee-cCCcEEEEEccCCCCCceEEee--ccCCeeeEEeccCCcEEEEEeCCceEE
Q psy14906 451 GHDNQPGHVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQTGKPPLRSIK--LDNGISFFRTHQESSMLAVCLDDFTVN 527 (583)
Q Consensus 451 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~ 527 (583)
...-...+.|+++++++.|+.+. ..+.|...+++.. . .+.+. .......+++.. +.++.+-...+.|.
T Consensus 473 -----~~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~--~-r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~ 543 (628)
T 4a0p_A 473 -----FSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGA--N-RIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIE 543 (628)
T ss_dssp -----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--S-CEEEECSSCSCEEEEEEET-TEEEEEETTTTEEE
T ss_pred -----eccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCC--c-eEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEE
Confidence 22345678999999876666554 4578999998664 2 23332 223456677654 44444444567888
Q ss_pred EEEccccceE
Q psy14906 528 IIDIDTCTII 537 (583)
Q Consensus 528 i~d~~~~~~~ 537 (583)
..|..+|+..
T Consensus 544 ~~~k~~G~~~ 553 (628)
T 4a0p_A 544 KIDMTGREGR 553 (628)
T ss_dssp EEETTSSSCC
T ss_pred EEECcCCCCc
Confidence 8887766543
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=99.02 E-value=7.1e-08 Score=82.67 Aligned_cols=131 Identities=14% Similarity=0.181 Sum_probs=94.1
Q ss_pred CCcEEEE-EecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeec
Q psy14906 423 CGNFVLI-GYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL 501 (583)
Q Consensus 423 ~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 501 (583)
+++.|.. ...++.+.+||..+.+.+.++... + ....+++|++.|+.+..++.|.++|..+. +.+..+..
T Consensus 95 ~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~---~-----eG~glt~dg~~L~~SdGs~~i~~iDp~T~--~v~~~I~V 164 (262)
T 3nol_A 95 WKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYD---G-----EGWGLTHNDQYLIMSDGTPVLRFLDPESL--TPVRTITV 164 (262)
T ss_dssp ETTEEEEEESSSSEEEEEETTTCCEEEEEECS---S-----CCCCEEECSSCEEECCSSSEEEEECTTTC--SEEEEEEC
T ss_pred eCCEEEEEEeeCCEEEEEECccCcEEEEEECC---C-----CceEEecCCCEEEEECCCCeEEEEcCCCC--eEEEEEEe
Confidence 3444444 445889999999999999888532 1 22333457777777766788999999988 77777654
Q ss_pred c------CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeeccc------------ccceeeEEecCCCcEEEEEe
Q psy14906 502 D------NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGH------------MGQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 502 ~------~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h------------~~~v~~l~~s~d~~~l~s~~ 563 (583)
. ..++.+.|. +|+..|..-.++.|.+.|.++++.+..+... ....+.|+|+|+++.|...+
T Consensus 165 ~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 165 TAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 3 234457776 7876666667889999999999998776532 13458899999888877666
Q ss_pred C
Q psy14906 564 M 564 (583)
Q Consensus 564 ~ 564 (583)
.
T Consensus 244 K 244 (262)
T 3nol_A 244 K 244 (262)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.99 E-value=3.9e-07 Score=77.46 Aligned_cols=195 Identities=9% Similarity=-0.002 Sum_probs=132.3
Q ss_pred eeeeeeeee---cCcccEEEEEeCCCceEEEEeeC--CeEEEEecCCcEEEeecCCCCCCe-EEEEeeCe-EE-EEEcCC
Q psy14906 21 RHRALGYVS---NHLPVVARFIRRRKETLFVTCVG--KAFHVYGCNHFKLLSVSPQHEDDI-TCLSSDFF-HI-YTSANN 92 (583)
Q Consensus 21 ~~~~~g~~~---~~~~~~~~~~p~~~~~~i~~~~~--~~i~v~d~~~~~~~~~~~~h~~~v-~~~~~~~~-~~-~~~~~~ 92 (583)
.++++..+. ....+-+.|+ +..++..++.. +.|+++|+++++.+....-..... -.+++++. +. +.-.++
T Consensus 8 ~~~v~~~~phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~ 85 (243)
T 3mbr_X 8 GYRVVKRYPHDTTAFTEGLFYL--RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNH 85 (243)
T ss_dssp CEEEEEEEECCTTCCEEEEEEE--TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSS
T ss_pred ceEEEEEcCCCCccccccEEEE--CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCC
Confidence 356666553 2233466785 35655555543 589999999999988765332221 34566553 33 333688
Q ss_pred eEEEEec-cceeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeC
Q psy14906 93 IIYAWRR-GIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPS 171 (583)
Q Consensus 93 ~i~vw~~-~~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 171 (583)
.+.++|. +.+.+.++.-.... ..+.++++.|+.+..++.|.++|.++.+.+.++....... .-..++.+.+.
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~~G-wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~------~~~~lNeLe~~ 158 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPGEG-WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGR------PLDNLNELEWV 158 (243)
T ss_dssp EEEEEETTTTEEEEEEECSSCC-CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTE------ECCCEEEEEEE
T ss_pred EEEEEECCcCcEEEEEeCCCCc-eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCc------ccccceeeEEe
Confidence 9999997 45777777643332 4667888888877778999999999999998887532111 11345566665
Q ss_pred CCCCEEEEEecCCeEEEEEccCCceeEEEecc-------------CCCeEEEEEecCCCCEEEEEcC
Q psy14906 172 PVVDIIGVGLSNKKIILHNILTDESLMEFIQT-------------WGPVTALSFRTDGPPMMVSGSN 225 (583)
Q Consensus 172 ~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~l~s~~~ 225 (583)
+|+..|....+..|.+.|.++++.+..+... ....+.|+++|+++.++++|-.
T Consensus 159 -~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 159 -NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp -TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred -CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 6776666666789999999999998887622 1356899999998867777754
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=6.3e-07 Score=82.52 Aligned_cols=154 Identities=9% Similarity=0.044 Sum_probs=98.2
Q ss_pred CceEEEEcc-CCcEEEEEec-----------------CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEE
Q psy14906 414 KPTCVYITH-CGNFVLIGYS-----------------SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI 475 (583)
Q Consensus 414 ~i~~~~~s~-~~~~l~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 475 (583)
.+..+++.+ +|++.++... +|.|..||..+++..... ........++++|+++.|+
T Consensus 127 ~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~------~~~~~p~gia~~~dg~~ly 200 (322)
T 2fp8_A 127 WLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLL------KELHVPGGAEVSADSSFVL 200 (322)
T ss_dssp CEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEE------EEESCCCEEEECTTSSEEE
T ss_pred ccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEec------cCCccCcceEECCCCCEEE
Confidence 356677888 7765555322 367888887666543221 1123456799999998655
Q ss_pred Ee-ecCCcEEEEEccCCCCCceEEe-eccCCeeeEEeccCCcEEEEEeC----------CceEEEEEccccceEEeeccc
Q psy14906 476 SG-GNDQTVKVWHFKQTGKPPLRSI-KLDNGISFFRTHQESSMLAVCLD----------DFTVNIIDIDTCTIIRKLSGH 543 (583)
Q Consensus 476 s~-~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~h 543 (583)
.+ ..++.|.+|++..........+ ...+ ...+++.++|++.++... .+.|..+|.+ ++.+..+...
T Consensus 201 v~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~ 278 (322)
T 2fp8_A 201 VAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLP 278 (322)
T ss_dssp EEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECC
T ss_pred EEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECC
Confidence 44 5568899999875311122222 2223 788999999987666544 4678888874 7777666543
Q ss_pred c----cceeeEEecCCCcEEEEEeCCCeEEEEeCCCc
Q psy14906 544 M----GQLTDADFSPDSRWLITASMDCTIRVWDIPSS 576 (583)
Q Consensus 544 ~----~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~ 576 (583)
. ..++.+++ .++++.++....+.|..+++...
T Consensus 279 ~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 279 PPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp TTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred CCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 2 34677777 46776666667889999998643
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=98.96 E-value=9.7e-05 Score=79.10 Aligned_cols=494 Identities=11% Similarity=0.060 Sum_probs=243.6
Q ss_pred cCcccEEEEEeCCCceEEEEeeCCeEEEEecCCc--------EEEeecCCCCCCeEEEEe-e------CeEEEEE---cC
Q psy14906 30 NHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHF--------KLLSVSPQHEDDITCLSS-D------FFHIYTS---AN 91 (583)
Q Consensus 30 ~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~--------~~~~~~~~h~~~v~~~~~-~------~~~~~~~---~~ 91 (583)
...|.++++. +++.+++++.-+.=.+|-++.. +.+..+. .-++|..++. | +++++++ .+
T Consensus 326 ~~~~ssl~~l--~~g~lFvgS~~Gds~l~~~~~~~~~~~~~~~~~~~~~-N~~PI~D~~v~d~~~~~~~~i~~~sG~g~~ 402 (1158)
T 3ei3_A 326 TSIAECLTYL--DNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFT-NLGPIVDMCVVDLERQGQGQLVTCSGAFKE 402 (1158)
T ss_dssp CSCCSEEEEC--STTEEEEECSSSCEEEEEECSSCCTTSCCEEEEEEEC-CCCSEEEEEEECTTSSSCCEEEEEECCGGG
T ss_pred ccCccEEEEE--CCCEEEEEEecCCcEEEEEecCCCCccceEEeEeeec-CcCCceeEEEEccCCCCCCeEEEEECcCCC
Confidence 4466777774 5566777774443344443321 4455555 4467887775 2 3666665 45
Q ss_pred CeEEEEecc--ceeeeeec-ccCccEEEEc-----cCCCEEEEEeCCCcEEEEEcCCCcEEEEee---cc----------
Q psy14906 92 NIIYAWRRG--IDIVGTYK-GHTSPVHLIL-----PFGPHLISVDEESNVKVWDIKAEETYLELS---FD---------- 150 (583)
Q Consensus 92 ~~i~vw~~~--~~~~~~~~-~h~~~v~~is-----~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~---------- 150 (583)
|.+++...+ .+....++ ..-..++.+. ....||+.+..+.+ .|+.+.. +.+.... |.
T Consensus 403 gsL~~lr~Gi~~~~~~~~~l~gv~~iWtl~~~~~~~~~~yLvlS~~~~T-~Vl~i~~-e~veev~~~gf~~~~~TL~~~~ 480 (1158)
T 3ei3_A 403 GSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVLSFVGQT-RVLMLNG-EEVEETELMGFVDDQQTFFCGN 480 (1158)
T ss_dssp CEEEEEEESBCEEEEEEECCCSCCEEEEECCCSSCSSCCEEEEEETTEE-EEEEEET-TEEEEECCTTCCSSSCEEEEEE
T ss_pred CeEEEEecCCCEEEEEeecCCCccEEEEEeecCCCCCCCEEEEECCCCe-EEEEEeC-CcccccccccccCCCCcEEEEE
Confidence 689888742 22222221 1224555551 23456666554444 3444321 1111110 00
Q ss_pred ----------CCceEEec-----------ccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCcee--EEEeccCCCe
Q psy14906 151 ----------NDTFKIMG-----------KRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL--MEFIQTWGPV 207 (583)
Q Consensus 151 ----------~~~~~~~~-----------~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~--~~~~~~~~~v 207 (583)
+....... ......|.+.+.+ +.+++.++ ++.+.++.+..++.. ..... ...|
T Consensus 481 l~~~~ivQVt~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~~l-~~ev 556 (1158)
T 3ei3_A 481 VAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHTEM-EHEV 556 (1158)
T ss_dssp ETTTEEEEEESSCEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEEEC-SSCE
T ss_pred cCCCeEEEEecCEEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeecccCC-CCce
Confidence 00000000 0112234443333 34565554 577888887755322 22222 3689
Q ss_pred EEEEEecCC-----CCEEEEEcC-CCcEEEEeCCCCeehhhhhhccccceEEEEEe--cCCCEEEEEeCCCeEEEEEccC
Q psy14906 208 TALSFRTDG-----PPMMVSGSN-TGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL--YNEPLLVTSSPDNTLKLWIFDK 279 (583)
Q Consensus 208 ~~~~~~~~~-----~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~d~~i~~w~~~~ 279 (583)
.|+++.|.. ..+++.|.. |++++|+++.+.+.+.....+......++.+. ....+|..|-.||.+.-+.++.
T Consensus 557 scl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~ 636 (1158)
T 3ei3_A 557 ACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNI 636 (1158)
T ss_dssp EEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECT
T ss_pred EEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcC
Confidence 999998642 138888886 99999999987655433211112234444443 2345788898999998887776
Q ss_pred CCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCC
Q psy14906 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILP 359 (583)
Q Consensus 280 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (583)
.++.....+...-...++.-..+. ..+..-+.+..+....++.-.. +.. + ......
T Consensus 637 ~tg~l~d~r~~~LG~~pv~L~~~~-~~~~~~V~a~s~rp~liy~~~~-~l~--~--------------------s~l~~~ 692 (1158)
T 3ei3_A 637 ETGLLSDRKKVTLGTQPTVLRTFR-SLSTTNVFACSDRPTVIYSSNH-KLV--F--------------------SNVNLK 692 (1158)
T ss_dssp TTCCEEEEEEEECCSSCCEEEEEE-SSSCEEEEEESSSCEEEEESSS-SEE--E--------------------EEBSSS
T ss_pred CCCccccceeEEcCCCceEEEEEe-eCCceeEEEECCCCEEEEEcCC-ceE--E--------------------eccChH
Confidence 543333222222223455444443 2333333333344444444322 110 0 011111
Q ss_pred ccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC------
Q psy14906 360 PVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS------ 433 (583)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------ 433 (583)
++..++.-.. +...+.++. ..+ +.+++..+.... . +........ ..+..++++|+.+.++++..+
T Consensus 693 ~v~~~~~F~s-e~~~~g~v~-~~~-~~LrI~~i~~~~--~--~~~~~ipL~--~Tprri~y~~~~~~~~v~~~~~~~~~~ 763 (1158)
T 3ei3_A 693 EVNYMCPLNS-DGYPDSLAL-ANN-STLTIGTIDEIQ--K--LHIRTVPLY--ESPRKICYQEVSQCFGVLSSRIEVQDT 763 (1158)
T ss_dssp CCCEEEEECC-SSSTTEEEE-ECS-SCEEEEEECCSS--S--EEEEEEECS--SEEEEEEEEGGGTEEEEEEEEEEEECS
T ss_pred HhceEeccCc-ccCCCcEEE-EcC-CceEEEEecccC--C--eeEEEEeCC--CCceEEEEcCCCCEEEEEEEecccccc
Confidence 1111111111 111123333 332 336666654321 1 111111111 456777777776655544321
Q ss_pred -------------------------------------------ceEEEEEcccCccccccCCCCCCCcccCeeEEE---E
Q psy14906 434 -------------------------------------------GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVV---S 467 (583)
Q Consensus 434 -------------------------------------------g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~---~ 467 (583)
+.|+++|..+.+.+..+.. .....+.+++ |
T Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l----~~nE~~~sv~~v~~ 839 (1158)
T 3ei3_A 764 SGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQF----LQNEYALSLVSCKL 839 (1158)
T ss_dssp SSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEEC----CTTEEEEEEEEECC
T ss_pred ccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeC----CCCcceEEEEEEEE
Confidence 3466666666665544432 2233444444 3
Q ss_pred eCC-CcEEEEee----------cCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccce
Q psy14906 468 DNL-NQIVISGG----------NDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI 536 (583)
Q Consensus 468 s~~-~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~ 536 (583)
..+ ..+++.|. ..|.|.++++.....+.+...+..+++++++-- +|++|| |- .+.+++|++...+.
T Consensus 840 ~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla-~i-g~~l~vy~l~~~~~ 916 (1158)
T 3ei3_A 840 GKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLA-SI-NSTVRLYEWTTEKE 916 (1158)
T ss_dssp TTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEE-EE-TTEEEEEEECTTSC
T ss_pred ccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEE-Ec-CCEEEEEECCCCce
Confidence 322 36777765 347899999985422333444556788887644 454444 33 46899999986654
Q ss_pred EEeecccccceeeEEecCCCcEEEEEeCCCeEEEEe
Q psy14906 537 IRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 537 ~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~ 572 (583)
+..-..+-..|..+.....+++++.|..-..|.+..
T Consensus 917 L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~ 952 (1158)
T 3ei3_A 917 LRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLA 952 (1158)
T ss_dssp EEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEE
T ss_pred EEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEE
Confidence 431111112233333333567888888776666543
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.92 E-value=2.2e-07 Score=79.55 Aligned_cols=128 Identities=11% Similarity=0.102 Sum_probs=92.2
Q ss_pred cEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccC-
Q psy14906 425 NFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN- 503 (583)
Q Consensus 425 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~- 503 (583)
+..++...++.+.+||..+.+.+.++... ..-..++ +|++.|+.+..++.|.++|..+. +.+..+....
T Consensus 107 ~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~------~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~--~v~~~I~V~~~ 176 (268)
T 3nok_A 107 RLYQLTWTEGLLFTWSGMPPQRERTTRYS------GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGF--ALVGAVQVKLR 176 (268)
T ss_dssp CEEEEESSSCEEEEEETTTTEEEEEEECS------SCCCCEE--EETTEEEEECSSSEEEEECTTTC--CEEEEEECEET
T ss_pred EEEEEEccCCEEEEEECCcCcEEEEEeCC------CceeEEe--cCCCEEEEECCCCEEEEEcCCCC--eEEEEEEeCCC
Confidence 34444556889999999999999888531 1223444 56777777767889999999988 7777765432
Q ss_pred -----CeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeeccc-------------ccceeeEEecCCCcEEEEEe
Q psy14906 504 -----GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGH-------------MGQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 504 -----~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h-------------~~~v~~l~~s~d~~~l~s~~ 563 (583)
.++.+.|. +|+..|....+..|.+.|.++++.+..+... .+-.+.|+|+|+++.|...+
T Consensus 177 g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 177 GQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 34566776 7876666657889999999999998776532 13468899999876666555
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.87 E-value=3e-06 Score=77.20 Aligned_cols=232 Identities=8% Similarity=-0.013 Sum_probs=131.6
Q ss_pred cceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC--cEEEEEccc
Q psy14906 249 KVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS--TLRIFNTKS 326 (583)
Q Consensus 249 ~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~ 326 (583)
.....++|+++++++++-..++.|..|+. .. ....... ....+..+++.+ +++++++..... .|..+|..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~--~g---~~~~~~~-~~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITP--DG---NQQIHAT-VEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECT--TC---CEEEEEE-CSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECC--CC---ceEEEEe-CCCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCC
Confidence 45678999999997777667888877743 22 2222222 234578899986 677555543322 365666555
Q ss_pred cccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccc
Q psy14906 327 ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPER 406 (583)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 406 (583)
++..... +...
T Consensus 105 g~~~~~~---------------------------------------------------------~~~~------------ 115 (306)
T 2p4o_A 105 GTVETLL---------------------------------------------------------TLPD------------ 115 (306)
T ss_dssp SCEEEEE---------------------------------------------------------ECTT------------
T ss_pred CeEEEEE---------------------------------------------------------eCCC------------
Confidence 4321110 0000
Q ss_pred ccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCc--cc---cccCCCCCCCcccCeeEEEEeCCCcEEE-EeecC
Q psy14906 407 CKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGA--HR---GSYGHDNQPGHVGGVRGVVSDNLNQIVI-SGGND 480 (583)
Q Consensus 407 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~--~~---~~~~~~~~~~h~~~v~~~~~s~~~~~l~-s~~~d 480 (583)
......++..+++..+++...++.|+.+|..+++ .. ..+..............+ +|+++.|+ +-...
T Consensus 116 -----~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~ 188 (306)
T 2p4o_A 116 -----AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEK 188 (306)
T ss_dssp -----CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTT
T ss_pred -----ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCC
Confidence 0112233334444444444457788888876432 11 000000001122234555 78887554 44567
Q ss_pred CcEEEEEccC-CCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceE--EeecccccceeeEEec---C
Q psy14906 481 QTVKVWHFKQ-TGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTII--RKLSGHMGQLTDADFS---P 554 (583)
Q Consensus 481 g~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~h~~~v~~l~~s---~ 554 (583)
+.|..+++.. +.......+........+++.++|+++++....+.|.++|.. ++.. ..+.......++++|. |
T Consensus 189 ~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~ 267 (306)
T 2p4o_A 189 MLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEG 267 (306)
T ss_dssp TEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTT
T ss_pred CEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccC
Confidence 8899999875 211112223223467889999999887777778899999975 6553 2344333568999998 8
Q ss_pred CCcEEEEEeC
Q psy14906 555 DSRWLITASM 564 (583)
Q Consensus 555 d~~~l~s~~~ 564 (583)
|++.|..++.
T Consensus 268 d~~~LyVt~~ 277 (306)
T 2p4o_A 268 DCTAIYVVTN 277 (306)
T ss_dssp TTTEEEEEEC
T ss_pred CCCEEEEECC
Confidence 8777765543
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=98.82 E-value=3.9e-06 Score=76.47 Aligned_cols=230 Identities=15% Similarity=0.087 Sum_probs=132.2
Q ss_pred cceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCC--CcEEEEeCCCCeeh
Q psy14906 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT--GHLTVWNLEDRQVE 240 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d--g~i~vwd~~~~~~~ 240 (583)
.....++|+++++++++-..++.|..||... +....+.. ...+..+++.++|+ ++++.... ..|..+|..+++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATV-EGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEEC-SSEEEEEEECTTSC-EEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CCCceeEEEcCCCc-EEEEeccCCcceEEEEcCCCCeEE
Confidence 5677899999999777766789999999864 44433333 35789999999998 65555332 24777787777643
Q ss_pred hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEe--------ccCCCCCeeEEEeeCCCCEEEE
Q psy14906 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIR--------EGHSAPPNYIQFYGNSSDNILS 312 (583)
Q Consensus 241 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~~l~~ 312 (583)
.............++..+++..+++-..++.|..+ +...+..+..... ...-.....+ +| +++.|+.
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~--d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~-dg~~lyv 183 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLI--DVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR-FGNFLYV 183 (306)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEE--ETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE-ETTEEEE
T ss_pred EEEeCCCccccCcccccCCCcEEEEECCCCeEEEE--eCCCCcEeEEEECCccccccccCCCCcCCCc--Cc-CCCEEEE
Confidence 22211112233445555555445544457766666 4322111111100 0111123444 55 5655544
Q ss_pred -eeCCCcEEEEEccc-cccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEe
Q psy14906 313 -AAGDSTLRIFNTKS-ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLW 390 (583)
Q Consensus 313 -~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 390 (583)
-...+.|..+++.. +.... ..++
T Consensus 184 ~d~~~~~I~~~~~~~~g~~~~-------------------------------------------------------~~~~ 208 (306)
T 2p4o_A 184 SNTEKMLLLRIPVDSTDKPGE-------------------------------------------------------PEIF 208 (306)
T ss_dssp EETTTTEEEEEEBCTTSCBCC-------------------------------------------------------CEEE
T ss_pred EeCCCCEEEEEEeCCCCCCCc-------------------------------------------------------cEEE
Confidence 44567888888754 21100 0000
Q ss_pred ecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcccc--ccCCCCCCCcccCeeEEEEe
Q psy14906 391 SFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRG--SYGHDNQPGHVGGVRGVVSD 468 (583)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~h~~~v~~~~~s 468 (583)
- . ......++++++|++.++....+.|.+++.. ++... .+ .......++++|.
T Consensus 209 ~-----------------~--~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~-----~~~~~~p~~~a~~ 263 (306)
T 2p4o_A 209 V-----------------E--QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQA-----EQGVIGSTAVAFG 263 (306)
T ss_dssp E-----------------E--SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECG-----GGTCTTEEEEEEC
T ss_pred e-----------------c--cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeec-----ccccCCceEEEEe
Confidence 0 0 0235678999999887777778899999975 54422 22 1223568899998
Q ss_pred ---CCCcEEEEeecC
Q psy14906 469 ---NLNQIVISGGND 480 (583)
Q Consensus 469 ---~~~~~l~s~~~d 480 (583)
|+++.|+.+...
T Consensus 264 g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 264 QTEGDCTAIYVVTNG 278 (306)
T ss_dssp CSTTTTTEEEEEECT
T ss_pred cccCCCCEEEEECCC
Confidence 887766655543
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=2.5e-06 Score=78.50 Aligned_cols=110 Identities=13% Similarity=0.108 Sum_probs=70.9
Q ss_pred CceEEEEccCCcEEEEE-ecCceEEEEEcccCcc--ccccCCCCCCCcccCeeEEEEeCCCcEEEEeec----------C
Q psy14906 414 KPTCVYITHCGNFVLIG-YSSGHVDRFNIQSGAH--RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN----------D 480 (583)
Q Consensus 414 ~i~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~~--~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~----------d 480 (583)
....++++|+++.|+++ +.++.|.+|++..... ...+. ...+ ...++++++|++.++... .
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~-----~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~ 259 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV-----KIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVD 259 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE-----ECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEE
T ss_pred cCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE-----eCCC-CCCeEECCCCCEEEEecCcccccccCCCc
Confidence 46679999999877666 5568999999875321 11111 1112 778999999987766544 4
Q ss_pred CcEEEEEccCCCCCceEEeecc-----CCeeeEEeccCCcEEEEEeCCceEEEEEccc
Q psy14906 481 QTVKVWHFKQTGKPPLRSIKLD-----NGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533 (583)
Q Consensus 481 g~i~iwd~~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 533 (583)
+.|..+|.. + +.+..+... ..++.+++ .+++++++....+.|..+++..
T Consensus 260 ~~v~~~d~~-G--~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 260 PKGIKFDEF-G--NILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEEEEECTT-S--CEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred cEEEEECCC-C--CEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 567777764 3 556555543 24566666 4666666666678888888753
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=98.79 E-value=3.2e-06 Score=71.86 Aligned_cols=161 Identities=7% Similarity=-0.057 Sum_probs=107.3
Q ss_pred CcceEEEeeCCCCCEEEEEecC--CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLSN--KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~d--~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
......+.|++ +.+..+.+.+ ..|+.+|+++++.+.+.... .........+++..+....-.++.+.+||.++.+.
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEE
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcE
Confidence 45567889986 5555665554 48999999999999988755 33333333344453666667789999999999999
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEecc--CC---CCCeeEEEeeCCCCEEEEee
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREG--HS---APPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~--~~---~~v~~~~~~~~~~~~l~~~~ 314 (583)
+.++..+ ..-..+ .+++..|+.+..++.|.++ |.. ..+.+..+.- +. ..++.+.+. ++...+..-
T Consensus 98 ~~ti~~~--~~Gwgl--t~dg~~L~vSdgs~~l~~i--Dp~--t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~lyanvw 167 (243)
T 3mbr_X 98 RARFRYP--GEGWAL--TSDDSHLYMSDGTAVIRKL--DPD--TLQQVGSIKVTAGGRPLDNLNELEWV--NGELLANVW 167 (243)
T ss_dssp EEEEECS--SCCCEE--EECSSCEEEECSSSEEEEE--CTT--TCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEET
T ss_pred EEEEeCC--CCceEE--eeCCCEEEEECCCCeEEEE--eCC--CCeEEEEEEEccCCcccccceeeEEe--CCEEEEEEC
Confidence 9988322 222344 4577777777667888888 544 3344444332 21 234566765 666555554
Q ss_pred CCCcEEEEEccccccceeec
Q psy14906 315 GDSTLRIFNTKSETSNKNLG 334 (583)
Q Consensus 315 ~dg~i~iwd~~~~~~~~~~~ 334 (583)
.+..|.+.|..+++....+.
T Consensus 168 ~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 168 LTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp TTTEEEEECTTTCBEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEE
Confidence 67899999999998776653
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.77 E-value=2.1e-07 Score=94.70 Aligned_cols=116 Identities=11% Similarity=0.063 Sum_probs=69.7
Q ss_pred EEEEEec-CCCCEEEEEcCCC-----------cEEEEeCCCCeehhh--hhhccccceEEEEEecCCCEEEEEeC-CCeE
Q psy14906 208 TALSFRT-DGPPMMVSGSNTG-----------HLTVWNLEDRQVENQ--IKKAHRKVVTGAHFLYNEPLLVTSSP-DNTL 272 (583)
Q Consensus 208 ~~~~~~~-~~~~~l~s~~~dg-----------~i~vwd~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~i 272 (583)
..+++.+ +++ +++.|+.+. .+.+||..+++.... +...+.....++++..++++++.|+. +..+
T Consensus 189 ~~~av~~~~g~-l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 189 AAAAIEPTSGR-VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT 267 (656)
T ss_dssp SEEEEETTTTE-EEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred eeEEEEecCCE-EEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCce
Confidence 3667777 777 777776532 588999988764322 21122333345677889999999984 4578
Q ss_pred EEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee-CC-----CcEEEEEccccc
Q psy14906 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA-GD-----STLRIFNTKSET 328 (583)
Q Consensus 273 ~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~ 328 (583)
.+||... .....+..+.... .-.+++..+ +++.++.|+ .+ ..+.+||..+.+
T Consensus 268 ~~yd~~t--~~W~~~~~~~~~R-~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 268 SLYDSSS--DSWIPGPDMQVAR-GYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEEEGGG--TEEEECCCCSSCC-SSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred EEecCcC--CceeECCCCCccc-cccceEEec-CCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 8886542 2233222222111 112344444 788888888 34 467888877654
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.70 E-value=2.5e-05 Score=67.52 Aligned_cols=164 Identities=9% Similarity=0.045 Sum_probs=112.8
Q ss_pred cCCcceEEEeeCCCCCEE-EEEecCCeEEEEEccCCceeEEEec-cCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCC
Q psy14906 160 RWNSCVNVLEPSPVVDII-GVGLSNKKIILHNILTDESLMEFIQ-TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDR 237 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~ 237 (583)
+-...+..++|+|+++.| ++...++.|...|.. ++.+..+.. .......+++.+++. ++++.-.++.+.++++...
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~-~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ-FVISDERDYAIYVISLTPN 101 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE-EEEEETTTTEEEEEEECTT
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE-EEEEECCCCcEEEEEcCCC
Confidence 555679999999987655 456778889999997 888887752 226788999999887 6666666788999887654
Q ss_pred ee---hhhhh-----hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEe-------ccCCCCCeeEEE
Q psy14906 238 QV---ENQIK-----KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIR-------EGHSAPPNYIQF 302 (583)
Q Consensus 238 ~~---~~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~-------~~~~~~v~~~~~ 302 (583)
.. +.... .........++|+|+++.|+++.......+|.++... ....+... ..+...+.++++
T Consensus 102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~-~~~~l~i~~~~~~~~~~~~~d~S~l~~ 180 (255)
T 3qqz_A 102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLL-SSNELHISKDKALQRQFTLDDVSGAEF 180 (255)
T ss_dssp CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTT-CSSCCEEEECHHHHHTCCSSCCCEEEE
T ss_pred CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccc-cCCceeeecchhhccccccCCceeEEE
Confidence 32 11110 1234457899999999888877766666777665211 11112221 113346789999
Q ss_pred eeCCCCEEEEeeCCCcEEEEEccc
Q psy14906 303 YGNSSDNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 303 ~~~~~~~l~~~~~dg~i~iwd~~~ 326 (583)
.|..+.+++....++.+..+|...
T Consensus 181 dp~tg~lliLS~~s~~L~~~d~~g 204 (255)
T 3qqz_A 181 NQQKNTLLVLSHESRALQEVTLVG 204 (255)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTC
T ss_pred cCCCCeEEEEECCCCeEEEEcCCC
Confidence 998777777777788888888654
|
| >3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli} | Back alignment and structure |
|---|
Probab=98.67 E-value=3.4e-05 Score=66.68 Aligned_cols=209 Identities=9% Similarity=0.039 Sum_probs=130.7
Q ss_pred EeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeec
Q psy14906 289 IREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGL 368 (583)
Q Consensus 289 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (583)
.+.+-...+..++|.|.++.++++...++.|...|.. ++..+.+....
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g------------------------------- 68 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF------------------------------- 68 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS-------------------------------
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC-------------------------------
Confidence 4556667899999998444445556778888888886 54443321100
Q ss_pred ccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccc-
Q psy14906 369 AREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHR- 447 (583)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~- 447 (583)
......+++.+++.++++.-.++.+.++++.....+
T Consensus 69 -------------------------------------------~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 69 -------------------------------------------VKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVK 105 (255)
T ss_dssp -------------------------------------------CSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEE
T ss_pred -------------------------------------------CCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeee
Confidence 034567788888887777666778888887654421
Q ss_pred --cccCCC-CCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCC-CceEEeec--------cCCeeeEEeccCCc
Q psy14906 448 --GSYGHD-NQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK-PPLRSIKL--------DNGISFFRTHQESS 515 (583)
Q Consensus 448 --~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~--------~~~v~~~~~s~~~~ 515 (583)
...... ...........++|+|+++.|+++.......+|.+..... ..+..... -..+..+++.|...
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg 185 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKN 185 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTT
T ss_pred eeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCC
Confidence 111111 0123456689999999998777777666666776652100 11222211 13578899998654
Q ss_pred -EEEEEeCCceEEEEEccccceEEeecccc---------cceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 516 -MLAVCLDDFTVNIIDIDTCTIIRKLSGHM---------GQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 516 -~l~~~~~dg~i~i~d~~~~~~~~~~~~h~---------~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
+++.....+.+.++|.+ ++.+..+.-.. ..-..|+|.++|+..+ .++.+.++++.-.
T Consensus 186 ~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyI-vsE~n~~y~f~~~ 252 (255)
T 3qqz_A 186 TLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYI-VSEPNRFYRFTPQ 252 (255)
T ss_dssp EEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEE-EETTTEEEEEEC-
T ss_pred eEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEE-EcCCceEEEEEec
Confidence 56666677889999976 55554433211 2467899999998544 5778877777543
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.66 E-value=9.7e-05 Score=67.37 Aligned_cols=201 Identities=9% Similarity=-0.045 Sum_probs=115.1
Q ss_pred ccCCCEEEEEe-CCCcEEEEEcCCC---cEEEEeeccCCceEEecccCCcceEEEeeCCCCCEE-EEEecCCeEEEEEcc
Q psy14906 118 LPFGPHLISVD-EESNVKVWDIKAE---ETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDII-GVGLSNKKIILHNIL 192 (583)
Q Consensus 118 s~~~~~l~s~~-~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~d~~i~iw~~~ 192 (583)
.+.++.|+.+. .++.|..+++.+. .....+. . ..-.....+++.+.+..| ++-...+.|.+.++.
T Consensus 38 d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~-~---------~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 38 EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI-S---------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEEC--------CEEEE-C---------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEE-e---------CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 44444444443 3467777776641 1111111 0 122345678888755555 444567899999987
Q ss_pred CCceeEEEeccCCCeEEEEEecCCCCEEEEEcCC-CcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEe-CCC
Q psy14906 193 TDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT-GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS-PDN 270 (583)
Q Consensus 193 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~ 270 (583)
.......+.........+++.|.+..++++.... +.|...++.. +....+....-.....+++++++..|+.+. ..+
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~ 186 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 186 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEEEEEECCCC
Confidence 4433333333346789999999766355554433 6888888763 322222122234678999998877666555 456
Q ss_pred eEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceee
Q psy14906 271 TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 271 ~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 333 (583)
.|..++++.. ..+.+............+++. .+..+++-...+.|..++..+++....+
T Consensus 187 ~I~~~d~dg~--~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 187 SISSIDVNGG--NRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEEETTSC--SCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred eEEEEecCCC--ceEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 8888876532 223332222222345678875 4556666666788999998777655544
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=98.66 E-value=0.00069 Score=70.39 Aligned_cols=445 Identities=8% Similarity=0.044 Sum_probs=236.1
Q ss_pred eCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe-eCeEEEEEcCCeEEEEeccceeeeeec-----ccCcc
Q psy14906 40 RRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS-DFFHIYTSANNIIYAWRRGIDIVGTYK-----GHTSP 113 (583)
Q Consensus 40 p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~~~~~~i~vw~~~~~~~~~~~-----~h~~~ 113 (583)
.+.+..+-+++ .+-+..||..+.+...........|.++.. ++.+.+++.+ .+..+|........+. -....
T Consensus 70 ~d~~g~lWigT-~~Gl~~yd~~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~ 147 (758)
T 3ott_A 70 IIDNTYLYMGT-DNGILVYNYRADRYEQPETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNT 147 (758)
T ss_dssp EETTTEEEEEE-TTEEEEEETTTTEECCCSCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSC
T ss_pred EcCCCcEEEEe-CCCeEEEeCCCCEEECcccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCe
Confidence 35556555554 445789998887654322222345777654 5566666655 7888887544444441 12345
Q ss_pred EEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEc
Q psy14906 114 VHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNI 191 (583)
Q Consensus 114 v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~ 191 (583)
|.++ ..+|...+ +..+ -|..++..+++.. .+...... ......|.++...+++..|-+|+. +-+..+|.
T Consensus 148 i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~-~~~~~~~~-----~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~ 218 (758)
T 3ott_A 148 IYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFE-GIPLPVHS-----SQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFP 218 (758)
T ss_dssp EEEEEECTTCCEEE-EETT-EEEEEETTTTEEE-EECCCCCT-----TCSSCCEEEEEEETTTTEEEEEEE-EEEEEEET
T ss_pred EEEEEEcCCCCEEE-EeCC-CHhhCccCCCceE-EecCCCcc-----ccccceeEEEEEECCCCEEEEEEC-CCCeEEcC
Confidence 7777 34555444 4444 4778887776533 22211000 011335888888887776666665 45888998
Q ss_pred cCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhh------hccccceEEEEEecCCCEEEE
Q psy14906 192 LTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK------KAHRKVVTGAHFLYNEPLLVT 265 (583)
Q Consensus 192 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~s 265 (583)
.+++...........|.++...++|. |..|+.+ -+.+++..+++...... .-....|.++....+|.+- .
T Consensus 219 ~~~~~~~~~~l~~~~i~~i~~d~~g~--lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-i 294 (758)
T 3ott_A 219 STGQIKQTEAFHNNSIKSLALDGNGD--LLAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIW-L 294 (758)
T ss_dssp TTTEEEEEEEEEEEEEEEEEECTTCC--EEEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEE-E
T ss_pred CCCeEEeccCCCCCeEEEEEEcCCCC--EEEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEE-E
Confidence 76654322112224688888888887 4445544 58888887654321110 0123468888887777644 4
Q ss_pred EeCCCeEEEEEccCCCCCceeeEEec----cCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhh
Q psy14906 266 SSPDNTLKLWIFDKADGNGRLLRIRE----GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341 (583)
Q Consensus 266 ~~~d~~i~~w~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 341 (583)
|...| +.+... . ...+...... .....|.++.... ++ .|..|+.+| +..++..++.....
T Consensus 295 GT~~G-l~~~~~--~-~~~~~~~~~~~~~~~~~~~v~~i~~D~-~g-~lWiGt~~G-l~~~~~~~~~~~~~--------- 358 (758)
T 3ott_A 295 GTDYG-ISLSRY--N-SALQFIPISQITGTGDGNQFYSLFRDS-KG-FYWFGGANG-LIRFTDPAGERHDA--------- 358 (758)
T ss_dssp EESSS-EEEECC--C-C-CEEEEHHHHSCSCCCCBEEEEEECT-TC-CEEEEETTE-EEEESCTTSSCCCC---------
T ss_pred EeCCc-cccccc--C-CceeEEecccCCCCCCCceEEEEEEcC-CC-CEEEeeCCc-ceeeccccccccee---------
Confidence 55556 444421 1 1111111000 1123466665542 34 455555554 55565443211000
Q ss_pred hhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEc
Q psy14906 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYIT 421 (583)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 421 (583)
..+..... ........|.++.-.
T Consensus 359 ----------------------------------------------~~~~~~~~-----------~~~l~~~~v~~i~~d 381 (758)
T 3ott_A 359 ----------------------------------------------IWYRMGDK-----------TYPLSHNRIRHIYED 381 (758)
T ss_dssp ----------------------------------------------EEECTTCS-----------SSCCSCSCEEEEEEC
T ss_pred ----------------------------------------------EEeccCCc-----------CCCCCCCceEEEEEC
Confidence 00000000 000001457788877
Q ss_pred cCCcEEEEEecCceEEEEEcccCccccccC-CCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC---CCCce-
Q psy14906 422 HCGNFVLIGYSSGHVDRFNIQSGAHRGSYG-HDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT---GKPPL- 496 (583)
Q Consensus 422 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~---~~~~~- 496 (583)
++|++-+ |+. +.+..||..+++...... ..........|.++...+++++.+ |+..+-|.++|..+. .....
T Consensus 382 ~~g~lWi-gt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gT~~~Gl~~~~~~~~~~~~~~~~~ 458 (758)
T 3ott_A 382 KEQQLWI-ATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWI-STCLGGIFVVDKHKLMQSTSGQYI 458 (758)
T ss_dssp TTSCEEE-EET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEE-EESSSCEEEEEHHHHHHCCSSEEE
T ss_pred CCCCEEE-EeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEE-EECCCceEEEccccccccCCccee
Confidence 7776554 444 469999987765433210 000001235688888888777544 555556888886531 00111
Q ss_pred --EEeec-----cCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecc---cccceeeEEecCCCcEEEEEeCCC
Q psy14906 497 --RSIKL-----DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSG---HMGQLTDADFSPDSRWLITASMDC 566 (583)
Q Consensus 497 --~~~~~-----~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---h~~~v~~l~~s~d~~~l~s~~~d~ 566 (583)
..+.. ...|.++...++|.+.+.++..+-+..+|.++++....... ....+.++....+|.+.+. +..|
T Consensus 459 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~~G 537 (758)
T 3ott_A 459 AEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FHGG 537 (758)
T ss_dssp CSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ETTE
T ss_pred cccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ecCc
Confidence 11111 12488888888888776444445588899887654432111 1245778888888876654 4455
Q ss_pred eEEEEeCCCcc
Q psy14906 567 TIRVWDIPSSQ 577 (583)
Q Consensus 567 ~i~vw~~~~~~ 577 (583)
+..++..+++
T Consensus 538 -l~~~~~~~~~ 547 (758)
T 3ott_A 538 -VMRINPKDES 547 (758)
T ss_dssp -EEEECC--CC
T ss_pred -eEEEecCCCc
Confidence 7788876654
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.66 E-value=2.7e-05 Score=73.27 Aligned_cols=187 Identities=12% Similarity=0.017 Sum_probs=114.1
Q ss_pred CEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEE-ecCCeEEEEEccCCceeEEE
Q psy14906 122 PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG-LSNKKIILHNILTDESLMEF 200 (583)
Q Consensus 122 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~ 200 (583)
.+|+.+. ...|+..++..+.....+ ........++|++.+..|... ...+.|..+++........+
T Consensus 88 ~~l~~~~-~~~I~~i~~~~~~~~~~~------------~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 88 PVLLFAN-RIDIRQVLPHRSEYTLLL------------NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 154 (386)
T ss_dssp CEEEEEC-BSCEEEECTTSCCCEEEE------------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE
T ss_pred ceeEeec-CccceeeccCCCcEEEEe------------cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE
Confidence 4455443 467888888776544333 234557899999866655544 45688999998765544434
Q ss_pred eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC--CeEEEEEcc
Q psy14906 201 IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD--NTLKLWIFD 278 (583)
Q Consensus 201 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--~~i~~w~~~ 278 (583)
.........+++.+.+..++++-...+.|.+.+++.......+ ...-.....+++.|.+..|+..... +.|...+++
T Consensus 155 ~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~-~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 155 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp CSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE-CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee-cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 3333456789999866536667677788999988744322222 2333567899999877666655443 556655443
Q ss_pred CCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccc
Q psy14906 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 326 (583)
. ..... .....-.....++++|.++.+.++-...+.|..+|+..
T Consensus 234 G--~~~~~--~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 234 G--SGRRI--IADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp S--CSCEE--EECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred C--CCcEE--EEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 2 11111 12222345688999974444444445567788888654
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.65 E-value=9e-05 Score=68.57 Aligned_cols=242 Identities=8% Similarity=-0.021 Sum_probs=143.5
Q ss_pred CCeEEEEeeC-eEEEEEcCCeEEEEeccceeeeeecccCccEEEE--ccCCCEEEEEe-CCCcEEEEEcCCCcEEEEeec
Q psy14906 74 DDITCLSSDF-FHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLI--LPFGPHLISVD-EESNVKVWDIKAEETYLELSF 149 (583)
Q Consensus 74 ~~v~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~ 149 (583)
+..+|.+.++ -++..+....|+..++.+.....+.........+ .+.++.|..+. ..+.|..++...+.....+.
T Consensus 34 d~~~C~~~~~~~~ll~~~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~- 112 (349)
T 3v64_C 34 DRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS- 112 (349)
T ss_dssp TSSCEEESSSCCEEEEECBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-
T ss_pred CCCcccccccCceeEeecccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEe-
Confidence 3345655432 2444445566888887664443333223334555 55556665544 46788889988765433332
Q ss_pred cCCceEEecccCCcceEEEeeCCCCCEE-EEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCC-C
Q psy14906 150 DNDTFKIMGKRWNSCVNVLEPSPVVDII-GVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT-G 227 (583)
Q Consensus 150 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g 227 (583)
........+++.+.+..| ++-...+.|.+.++........+.........+++.|.+..++++-... +
T Consensus 113 ----------~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~ 182 (349)
T 3v64_C 113 ----------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTP 182 (349)
T ss_dssp ----------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSC
T ss_pred ----------CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCC
Confidence 223445678998765555 4445567899999874443333333446789999999766455565555 7
Q ss_pred cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEe-CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC
Q psy14906 228 HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS-PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306 (583)
Q Consensus 228 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 306 (583)
.|..+++.... ...+....-.....++++|++..|+.+. ..+.|..++++.. ..+. ...........+++. +
T Consensus 183 ~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~--~~~~--~~~~~~~~P~giav~--~ 255 (349)
T 3v64_C 183 RIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS--HRKA--VISQGLPHPFAITVF--E 255 (349)
T ss_dssp EEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEE--EECSSCSSEEEEEEE--T
T ss_pred EEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC--ceEE--EEeCCCCCceEEEEE--C
Confidence 89999887432 2222122234578999998776666554 4567887866531 1121 222223455778874 4
Q ss_pred CCEEEEeeCCCcEEEEEccccccceee
Q psy14906 307 SDNILSAAGDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 307 ~~~l~~~~~dg~i~iwd~~~~~~~~~~ 333 (583)
+...++-...+.|..++..+++....+
T Consensus 256 ~~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 256 DSLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CEEEEecCCCCeEEEEEccCCCccEEe
Confidence 555566666788888886666655444
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.64 E-value=1.5e-05 Score=76.18 Aligned_cols=148 Identities=11% Similarity=0.034 Sum_probs=94.8
Q ss_pred Ecc-CCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec-CC----eEEEEE
Q psy14906 117 ILP-FGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS-NK----KIILHN 190 (583)
Q Consensus 117 is~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d~----~i~iw~ 190 (583)
++| ++..|..+...+.|+.+|.+++...... ........++|++++++|.++.. ++ .+...+
T Consensus 144 vdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~------------~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 144 FDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY------------SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT 211 (430)
T ss_dssp EETTEEEEEEEEEBTEEEEEEETTTTEEEEEE------------CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE
T ss_pred ECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe------------cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe
Confidence 466 4566666665578888998876543332 33456789999999996666554 22 344344
Q ss_pred ccCCcee--EEEeccCCCeEEEEEec-CCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEE-E
Q psy14906 191 ILTDESL--MEFIQTWGPVTALSFRT-DGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVT-S 266 (583)
Q Consensus 191 ~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~ 266 (583)
. .+... ..+.. ......++++| ++. ++++-..++.|..++...+........+.......++|+|++++|+. -
T Consensus 212 ~-~g~~~~~~~l~~-~~~p~giavdp~~g~-lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d 288 (430)
T 3tc9_A 212 R-ESGFKVITELTK-GQNCNGAETHPINGE-LYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVV 288 (430)
T ss_dssp G-GGTSCSEEEEEE-CSSCCCEEECTTTCC-EEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred C-CCceeeeeeecc-CCCceEEEEeCCCCE-EEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEE
Confidence 3 33322 23332 24567889999 565 77777778899999998765422221122245678999999995544 4
Q ss_pred eCCCeEEEEEccC
Q psy14906 267 SPDNTLKLWIFDK 279 (583)
Q Consensus 267 ~~d~~i~~w~~~~ 279 (583)
...+.|..++.+.
T Consensus 289 ~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 289 VNQHYILRSDYDW 301 (430)
T ss_dssp TTTTEEEEEEEET
T ss_pred CCCCEEEEEeCCc
Confidence 4578888887764
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.64 E-value=6.7e-05 Score=69.44 Aligned_cols=186 Identities=12% Similarity=0.005 Sum_probs=113.4
Q ss_pred CEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEE-ecCCeEEEEEccCCceeEEE
Q psy14906 122 PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG-LSNKKIILHNILTDESLMEF 200 (583)
Q Consensus 122 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~ 200 (583)
.+|+.+. ...|+..++........+ ........++|++....|... ...+.|..+++........+
T Consensus 45 ~~ll~~~-~~~I~~i~~~g~~~~~~~------------~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 111 (349)
T 3v64_C 45 PVLLFAN-RIDIRQVLPHRSEYTLLL------------NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 111 (349)
T ss_dssp CEEEEEC-BSCEEEECTTSCCEEEEE------------CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred ceeEeec-ccceEEEeCCCCeeEEee------------cCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE
Confidence 3444433 456888887765443333 233457899999866666544 45688999998765544433
Q ss_pred eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC-C-CeEEEEEcc
Q psy14906 201 IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP-D-NTLKLWIFD 278 (583)
Q Consensus 201 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d-~~i~~w~~~ 278 (583)
.........+++.+.+..++++-...+.|.+.+++... ...+....-.....+++.|.+..|+.... . +.|...+++
T Consensus 112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 33335668899998655366777777899999987543 22221223356789999986665555543 3 566666544
Q ss_pred CCCCCceeeEEe-ccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccc
Q psy14906 279 KADGNGRLLRIR-EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 279 ~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 326 (583)
. .....+ ...-.....++++|.++.+.++-...+.|..+|+..
T Consensus 191 G-----~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 191 G-----SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp S-----CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred C-----CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 2 222222 222345688999974444444444567788888754
|
| >1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 | Back alignment and structure |
|---|
Probab=98.63 E-value=0.00015 Score=66.20 Aligned_cols=184 Identities=10% Similarity=-0.030 Sum_probs=112.3
Q ss_pred EEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEE-ecCCeEEEEEccC---CceeE
Q psy14906 123 HLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG-LSNKKIILHNILT---DESLM 198 (583)
Q Consensus 123 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~d~~i~iw~~~~---~~~~~ 198 (583)
+|+.+. ...|+..|+.+.+....+ ........++|+++++.|..+ ..++.|..+++.. +....
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~------------~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~ 69 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLI------------PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYD 69 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEE------------CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CE
T ss_pred EEEEEC-CCeEEEEECCCcceEehh------------cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccE
Confidence 444443 457899999887655544 234567899999876655554 4568899999875 12222
Q ss_pred -EEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC--CeEEEE
Q psy14906 199 -EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD--NTLKLW 275 (583)
Q Consensus 199 -~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--~~i~~w 275 (583)
.+.........+++.+.+..++++-...+.|.++++........+ .........+++.|.+..|+.+... +.|...
T Consensus 70 ~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~-~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~ 148 (316)
T 1ijq_A 70 TVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 148 (316)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE-ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred EEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEE-ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEE
Confidence 233222456899999765536666677889999998754322222 2233567899999876666555543 566666
Q ss_pred EccCCCCCceeeEEe-ccCCCCCeeEEEeeCCCCEEEEe-eCCCcEEEEEccc
Q psy14906 276 IFDKADGNGRLLRIR-EGHSAPPNYIQFYGNSSDNILSA-AGDSTLRIFNTKS 326 (583)
Q Consensus 276 ~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~ 326 (583)
+++. .....+ ...-.....+++++ ++..|+.+ ...+.|..+|+..
T Consensus 149 ~~dG-----~~~~~~~~~~~~~P~gla~d~-~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 149 GLNG-----VDIYSLVTENIQWPNGITLDL-LSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp ETTS-----CCEEEEECSSCSCEEEEEEET-TTTEEEEEETTTTEEEEEETTS
T ss_pred cCCC-----CCeEEEEECCCCCceEEEEec-cCCEEEEEECCCCeEEEEecCC
Confidence 5532 222222 22234568999997 45555544 4567888888764
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=98.62 E-value=2.3e-06 Score=87.08 Aligned_cols=114 Identities=14% Similarity=0.053 Sum_probs=72.9
Q ss_pred Ecc-CCCEEEEEeCCC-----------cEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec-C
Q psy14906 117 ILP-FGPHLISVDEES-----------NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS-N 183 (583)
Q Consensus 117 is~-~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-d 183 (583)
+.+ +++.++.|+.+. .+.+||..+++-....... ..+.....++++..+++++++|+. +
T Consensus 193 v~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~--------~~~~~~~~~~~~~~~g~lyv~GG~~~ 264 (656)
T 1k3i_A 193 IEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV--------TKHDMFCPGISMDGNGQIVVTGGNDA 264 (656)
T ss_dssp EETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEE--------CSCCCSSCEEEECTTSCEEEECSSST
T ss_pred EEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccC--------CCCCCccccccCCCCCCEEEeCCCCC
Confidence 456 888888887543 5889999887532211110 023334445777889999999884 4
Q ss_pred CeEEEEEccCCceeEEEeccCC-CeEEEEEecCCCCEEEEEc-CC-----CcEEEEeCCCCee
Q psy14906 184 KKIILHNILTDESLMEFIQTWG-PVTALSFRTDGPPMMVSGS-NT-----GHLTVWNLEDRQV 239 (583)
Q Consensus 184 ~~i~iw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~-~d-----g~i~vwd~~~~~~ 239 (583)
..+.+||..+++-...-..+.. .-.+++..++++ +++.|+ .+ ..+.+||..+++.
T Consensus 265 ~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 265 KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred CceEEecCcCCceeECCCCCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCCCcc
Confidence 5899999987654332221211 223456667888 888887 34 5699999987653
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.62 E-value=4.1e-06 Score=86.54 Aligned_cols=191 Identities=11% Similarity=0.053 Sum_probs=106.2
Q ss_pred EEc-cCCCEEEEEeC-CC----cEEEEEcCCC-cEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC-----
Q psy14906 116 LIL-PFGPHLISVDE-ES----NVKVWDIKAE-ETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN----- 183 (583)
Q Consensus 116 ~is-~~~~~l~s~~~-dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----- 183 (583)
.+| |||++||.+.. +| +|+++|+.++ +.+.. ........++|+|||+.|+....+
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-------------~~~~~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-------------KVSGTNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-------------CEEEECSCCEECSSTTEEEEEEECTTCCE
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-------------cccCceeeEEEecCCCEEEEEEECCCCCC
Confidence 359 99999886533 33 5999999998 63211 001123468899999988887765
Q ss_pred CeEEEEEccCCce--eEEEe-ccCCCeEEEEEecCCCCEEEEEcC--CCcEEEEeCCCCe-eh--hhhhhccccceEEEE
Q psy14906 184 KKIILHNILTDES--LMEFI-QTWGPVTALSFRTDGPPMMVSGSN--TGHLTVWNLEDRQ-VE--NQIKKAHRKVVTGAH 255 (583)
Q Consensus 184 ~~i~iw~~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~-~~--~~~~~~~~~~v~~~~ 255 (583)
..|.++++.+++. ...+. ........+.|+|||++++++... ...|.++|+.++. .. ..+.........++.
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~ 326 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQ 326 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEE
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEe
Confidence 3688888877642 23333 222456788999999955554432 3458888988652 12 223233444555666
Q ss_pred EecCCCEEEEEeCC--CeEEEEEccCCC-CCceeeEEeccCCC--CCeeEEEeeCCCCEEEEeeCCCcEEEEE
Q psy14906 256 FLYNEPLLVTSSPD--NTLKLWIFDKAD-GNGRLLRIREGHSA--PPNYIQFYGNSSDNILSAAGDSTLRIFN 323 (583)
Q Consensus 256 ~~~~~~~l~s~~~d--~~i~~w~~~~~~-~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~i~iwd 323 (583)
|+.++.+++....+ +..+||.++... ...+.. +..+.. .+..+.+. .+..+++...++..++|-
T Consensus 327 ~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~--li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 327 MHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHV--LVDHSEDVFMESIAVR--SNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp EETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCE--EECCCSSEEEEEEEEC--SSEEEEEEEETTEEEEEE
T ss_pred eeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceee--EECCCCCcEEEEEEEE--CCEEEEEEEeCCEEEEEE
Confidence 55444444444443 444555545432 121220 112222 23334432 344555666667554443
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.62 E-value=2.3e-05 Score=74.83 Aligned_cols=150 Identities=6% Similarity=-0.017 Sum_probs=90.5
Q ss_pred EccC--CCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC---C-eEEEEE
Q psy14906 117 ILPF--GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN---K-KIILHN 190 (583)
Q Consensus 117 is~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---~-~i~iw~ 190 (583)
+.|+ +..|..+...+.|+.+|..+++..... ........++++++|+++++.... . .+...+
T Consensus 146 vd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~------------~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 146 FDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT------------TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp ECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC------------CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEEC
T ss_pred EccccCCCEEEEEeCCCCEEEEECCCCEEEEee------------cCCCCccEEEECCCCCEEEEcCCCCcccceEEEEE
Confidence 3663 455666554488999998877655433 334568899999999944443321 1 233344
Q ss_pred ccCCcee-EEEeccCCCeEEEEEec-CCCCEEEEEcCCCcEEEEeCCCCeehhhh-hhccccceEEEEEecCCCEEEEE-
Q psy14906 191 ILTDESL-MEFIQTWGPVTALSFRT-DGPPMMVSGSNTGHLTVWNLEDRQVENQI-KKAHRKVVTGAHFLYNEPLLVTS- 266 (583)
Q Consensus 191 ~~~~~~~-~~~~~~~~~v~~~~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~- 266 (583)
...+... ..+. .......+++.| ++. ++++-..++.|+.+|..+++....+ ..+....-..++|+|+++.|+.+
T Consensus 214 ~~~~~~~~~~~~-~~~~P~giavd~~~G~-lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad 291 (433)
T 4hw6_A 214 RASGFTERLSLC-NARGAKTCAVHPQNGK-IYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIY 291 (433)
T ss_dssp GGGTTCCEEEEE-ECSSBCCCEECTTTCC-EEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEE
T ss_pred CCCCeecccccc-ccCCCCEEEEeCCCCe-EEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEe
Confidence 3322111 1222 224567789999 665 6666667788999999877552222 11122233469999999955544
Q ss_pred eCCCeEEEEEccCC
Q psy14906 267 SPDNTLKLWIFDKA 280 (583)
Q Consensus 267 ~~d~~i~~w~~~~~ 280 (583)
...+.|..++++..
T Consensus 292 ~~~~~I~~~~~d~~ 305 (433)
T 4hw6_A 292 NGKHCIYRVDYNRE 305 (433)
T ss_dssp TTTTEEEEEEBCTT
T ss_pred CCCCEEEEEeCCCC
Confidence 45678888876643
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.56 E-value=0.00018 Score=67.85 Aligned_cols=246 Identities=9% Similarity=0.006 Sum_probs=141.6
Q ss_pred EEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEe-CCCeEEEEEccCCCCCceeeEEeccCCCCC
Q psy14906 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS-PDNTLKLWIFDKADGNGRLLRIREGHSAPP 297 (583)
Q Consensus 219 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v 297 (583)
+|+.+. ...|+..++........+ .....+..++|++.+..|+.+. ..+.|..++++..................+
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~--~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEE--CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred eeEEec-cceeEEEccCCcceeEec--cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 344433 357888888765443333 3446788999998766555554 467777776543210011222233233456
Q ss_pred eeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccE
Q psy14906 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNI 377 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (583)
..+++.+..+.+.++-...+.|.+.++........+
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~-------------------------------------------- 197 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-------------------------------------------- 197 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEE--------------------------------------------
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEE--------------------------------------------
Confidence 788887644444455555677777776543211100
Q ss_pred EEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec--CceEEEEEcccCccccccCCCCC
Q psy14906 378 AAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS--SGHVDRFNIQSGAHRGSYGHDNQ 455 (583)
Q Consensus 378 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~ 455 (583)
. ........++++|.+.+|+.... .+.|...++.........
T Consensus 198 -------------~------------------~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~----- 241 (400)
T 3p5b_L 198 -------------R------------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV----- 241 (400)
T ss_dssp -------------E------------------CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE-----
T ss_pred -------------e------------------CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE-----
Confidence 0 00035778999997766666553 377888888654333322
Q ss_pred CCcccCeeEEEEeCCCcEEEEee-cCCcEEEEEccCCCCCceEEeec---cCCeeeEEeccCCcEEEEEeCCceEEEEEc
Q psy14906 456 PGHVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQTGKPPLRSIKL---DNGISFFRTHQESSMLAVCLDDFTVNIIDI 531 (583)
Q Consensus 456 ~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 531 (583)
...-.....|++++++..|+.+. ..+.|...|++.. ........ -.....+++ ..+.++.+-...+.|..+|.
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~--~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--CCEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSEEEEES
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC--ccEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeEEEEEc
Confidence 23335678999998777666554 5678999998765 33333332 134556666 23445555566788999997
Q ss_pred cccceEEeecccccceeeE
Q psy14906 532 DTCTIIRKLSGHMGQLTDA 550 (583)
Q Consensus 532 ~~~~~~~~~~~h~~~v~~l 550 (583)
.+|+.+..+.........+
T Consensus 319 ~~G~~~~~i~~~~~~p~~i 337 (400)
T 3p5b_L 319 LTGSDVNLLAENLLSPEDM 337 (400)
T ss_dssp SSCCCCEEEECSCSCEEEE
T ss_pred CCCCceEEEecCCCCCceE
Confidence 7776665554333333444
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=98.54 E-value=2.9e-05 Score=80.22 Aligned_cols=116 Identities=8% Similarity=0.050 Sum_probs=69.0
Q ss_pred CeEEEEEe-cCCCCEEEEEcCCC----cEEEEeCCCC-eehhhhhhccccceEEEEEecCCCEEEEEeCC-----CeEEE
Q psy14906 206 PVTALSFR-TDGPPMMVSGSNTG----HLTVWNLEDR-QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD-----NTLKL 274 (583)
Q Consensus 206 ~v~~~~~~-~~~~~~l~s~~~dg----~i~vwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~i~~ 274 (583)
.+...+|| |||+.++++...+| .|+++|+.++ +.+... -......++|+|||+.|+....+ ..|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~---~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK---VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC---EEEECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc---ccCceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57788999 99994444444433 4999999988 643211 11223568899999888777654 24555
Q ss_pred EEccCCCCCceeeEEec-cCCCCCeeEEEeeCCCCEEEEeeC---CCcEEEEEcccc
Q psy14906 275 WIFDKADGNGRLLRIRE-GHSAPPNYIQFYGNSSDNILSAAG---DSTLRIFNTKSE 327 (583)
Q Consensus 275 w~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~ 327 (583)
+++ .++.......+. ........+.|+| |+++|+..+. ...|.++|+.++
T Consensus 252 ~~l--gt~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 252 HVM--GKLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EET--TSCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEC--CCCchhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCC
Confidence 544 332222122222 2223456778997 7888776553 234666666543
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.53 E-value=0.00014 Score=66.12 Aligned_cols=246 Identities=9% Similarity=0.054 Sum_probs=139.4
Q ss_pred EEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEE-EEeCCCeEEEEEccCCCCCceeeEEeccCCCCC
Q psy14906 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV-TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP 297 (583)
Q Consensus 219 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v 297 (583)
+|+.+. ...|+..++........+.........+++|.+.+..|+ +-...+.|..++++.. .... ......-...
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~--~~~~-~~~~~~l~~p 81 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT--ESVQ-NVVVSGLLSP 81 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSS--SCCC-EEEEECCSCC
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCC--CceE-EEEcCCCCCc
Confidence 333333 357999999865321211122234567899998655554 4445677877765432 1111 1112222356
Q ss_pred eeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccE
Q psy14906 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNI 377 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (583)
..+++.+.++...++-...+.|.++++..... ..+.
T Consensus 82 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~------------------------------------------- 117 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLF------------------------------------------- 117 (318)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEE-------------------------------------------
T ss_pred cEEEEEcCCCeEEEEECCCCEEEEEECCCCcE-EEEE-------------------------------------------
Confidence 78888864455555555667888888754321 1100
Q ss_pred EEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec--CceEEEEEcccCccccccCCCCC
Q psy14906 378 AAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS--SGHVDRFNIQSGAHRGSYGHDNQ 455 (583)
Q Consensus 378 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~ 455 (583)
. ........++++|.+..|+.... .+.|..+++.........
T Consensus 118 -------------~------------------~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~----- 161 (318)
T 3sov_A 118 -------------W------------------QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII----- 161 (318)
T ss_dssp -------------C------------------SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE-----
T ss_pred -------------e------------------CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE-----
Confidence 0 00145678999987766666653 578888887643322222
Q ss_pred CCcccCeeEEEEeCCCcEEEEe-ecCCcEEEEEccCCCCCceEEee-ccCCeeeEEeccCCcEEEEEeCCceEEEEEccc
Q psy14906 456 PGHVGGVRGVVSDNLNQIVISG-GNDQTVKVWHFKQTGKPPLRSIK-LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT 533 (583)
Q Consensus 456 ~~h~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 533 (583)
...-.....++++|++..|+.+ ...+.|..+|++.. ....... .......+++. .+.++.+-...+.|..++..+
T Consensus 162 ~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~--~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~ 238 (318)
T 3sov_A 162 NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT--NRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYT 238 (318)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC--ceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCC
Confidence 1223456899999966655544 45678999998764 3322222 22456667774 344555555678999999887
Q ss_pred cceEEeecccccceeeEE
Q psy14906 534 CTIIRKLSGHMGQLTDAD 551 (583)
Q Consensus 534 ~~~~~~~~~h~~~v~~l~ 551 (583)
|+....+........+++
T Consensus 239 G~~~~~i~~~~~~P~~i~ 256 (318)
T 3sov_A 239 GEGLREIHSDIFSPMDIH 256 (318)
T ss_dssp CCSCEEEECCCSSCCCEE
T ss_pred CCceEEEeCCCCCCcEEE
Confidence 776555543323333443
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=98.53 E-value=0.0001 Score=69.34 Aligned_cols=240 Identities=8% Similarity=-0.037 Sum_probs=142.1
Q ss_pred eEEEEeeC-eEEEEEcCCeEEEEeccceeeeeecccCccEEEE--ccCCCEEEEE-eCCCcEEEEEcCCCcEEEEeeccC
Q psy14906 76 ITCLSSDF-FHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLI--LPFGPHLISV-DEESNVKVWDIKAEETYLELSFDN 151 (583)
Q Consensus 76 v~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~ 151 (583)
-+|.+.++ -++..+....|+..++.+.....+.........+ .+.++.|+.+ ...+.|..++.+.+.....+.
T Consensus 79 ~~C~~~~~~~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~--- 155 (386)
T 3v65_B 79 RSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS--- 155 (386)
T ss_dssp SCEEECSSCCEEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC---
T ss_pred CeECCccccceeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe---
Confidence 34555432 3455556677888887654433333333334555 5555555554 456789999988765433332
Q ss_pred CceEEecccCCcceEEEeeCCCCCEE-EEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCC-CcE
Q psy14906 152 DTFKIMGKRWNSCVNVLEPSPVVDII-GVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT-GHL 229 (583)
Q Consensus 152 ~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g~i 229 (583)
........+++.+.+..| ++-...+.|.+.++........+.........+++.|.+..++++-... +.|
T Consensus 156 --------~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I 227 (386)
T 3v65_B 156 --------TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRI 227 (386)
T ss_dssp --------SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred --------CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEE
Confidence 223345678888765555 4445567888888864443333333446789999999776455555445 788
Q ss_pred EEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEe-CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCC
Q psy14906 230 TVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS-PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSD 308 (583)
Q Consensus 230 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 308 (583)
..+++.... ...+....-.....++++|++..|+.+. ..+.|..++++.. ..+ ..+.........+++. .+.
T Consensus 228 ~r~~~dG~~-~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~--~~~--~~~~~~~~~P~giav~--~~~ 300 (386)
T 3v65_B 228 EASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS--HRK--AVISQGLPHPFAITVF--EDS 300 (386)
T ss_dssp EEEETTSCS-CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC--SCE--EEECSSCSSEEEEEEE--TTE
T ss_pred EEEeCCCCC-cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC--eeE--EEEECCCCCceEEEEE--CCE
Confidence 888886432 2222122234578999998766665554 4567777755421 112 1222223455778884 455
Q ss_pred EEEEeeCCCcEEEEEccccccceee
Q psy14906 309 NILSAAGDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 309 ~l~~~~~dg~i~iwd~~~~~~~~~~ 333 (583)
.+++-...+.|..++..+++....+
T Consensus 301 ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 301 LYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp EEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEeeCCCCeEEEEECCCCcceEEE
Confidence 6666667788988887676655544
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.52 E-value=6.3e-05 Score=71.76 Aligned_cols=157 Identities=9% Similarity=0.040 Sum_probs=93.2
Q ss_pred CCceEEEEcc-CCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEE-EEeecCCcEEEEEccC
Q psy14906 413 SKPTCVYITH-CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIV-ISGGNDQTVKVWHFKQ 490 (583)
Q Consensus 413 ~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~~ 490 (583)
.....++++| ++.++++-..++.|+.++...+....... .........++|+|++++| ++-...+.|..++.+.
T Consensus 226 ~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~----~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 226 QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFT----IQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEE----CSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEE----cCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 3467889999 66766666678899999988665422221 1223457799999999954 4555678899988764
Q ss_pred CCCCc--eEEeecc----------------CCee-eEEec--------cCCcEEEEEeCCceEEEEEccccceEEeec--
Q psy14906 491 TGKPP--LRSIKLD----------------NGIS-FFRTH--------QESSMLAVCLDDFTVNIIDIDTCTIIRKLS-- 541 (583)
Q Consensus 491 ~~~~~--~~~~~~~----------------~~v~-~~~~s--------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-- 541 (583)
..... ...+... .... .++.. ++|.++++-...+.|+.++ .+|+.....-
T Consensus 302 ~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~~g~g 380 (430)
T 3tc9_A 302 KTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTFAGRG 380 (430)
T ss_dssp TTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEEEECC
T ss_pred ccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEEEeCC
Confidence 21011 1111110 1122 34443 3355555555667888888 3454332221
Q ss_pred -----c--c--------ccceeeEEecCC-CcEEEEEeCCCeEEEEeCC
Q psy14906 542 -----G--H--------MGQLTDADFSPD-SRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 542 -----~--h--------~~~v~~l~~s~d-~~~l~s~~~d~~i~vw~~~ 574 (583)
+ . -.....|+++|+ +.++++-...+.|+..+++
T Consensus 381 ~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 381 SNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp TTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 1 0 124778999994 6655655566788887754
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=98.51 E-value=0.00026 Score=64.84 Aligned_cols=148 Identities=5% Similarity=-0.069 Sum_probs=87.9
Q ss_pred CCceEEEEccCCcEEEEEecCceEEE-EEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDR-FNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i-~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
..+..+.+.+++++++++.. |.++. .|- .+..-..+. ......+..+++.++++.++ ++.+|.+++.+.+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~-G~~~~S~d~-gG~tW~~~~----~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSSR-GSFYSTWEP-GQTAWEPHN----RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNS 235 (327)
T ss_dssp CCEEEEEECTTSCEEEEETT-SSEEEEECT-TCSSCEEEE----CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEE
T ss_pred cceEEEEEcCCCcEEEEECC-CcEEEEeCC-CCCceeECC----CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCC
Confidence 34678889998888877654 44433 331 122222221 23456788999999887654 455788777642212
Q ss_pred CCCceEEee-----ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeec---ccccceeeEEecCCCcEEEEEe
Q psy14906 492 GKPPLRSIK-----LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLS---GHMGQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 492 ~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~h~~~v~~l~~s~d~~~l~s~~ 563 (583)
+.-..+. ....+..+.+.+++.+++++. ++.+ .+..+.|+.-..+. .+...+.++.|.+++. ++.++
T Consensus 236 --~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G 310 (327)
T 2xbg_A 236 --ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILG 310 (327)
T ss_dssp --EEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEEC
T ss_pred --CeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEc
Confidence 1111111 123578888988887777654 6666 44555555444343 2345688899986665 55667
Q ss_pred CCCeEEEEe
Q psy14906 564 MDCTIRVWD 572 (583)
Q Consensus 564 ~d~~i~vw~ 572 (583)
.+|.|.-++
T Consensus 311 ~~G~i~~~~ 319 (327)
T 2xbg_A 311 QKGILLRYV 319 (327)
T ss_dssp STTEEEEEC
T ss_pred CCceEEEEc
Confidence 789877665
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=98.49 E-value=4.6e-05 Score=68.38 Aligned_cols=149 Identities=14% Similarity=0.301 Sum_probs=100.4
Q ss_pred CceEEEEEcc--cCccccccCCCCCC--CcccCeeEEEE--eCC-Cc-EEEEeecCCcEEEEEccCC-----CCCceEEe
Q psy14906 433 SGHVDRFNIQ--SGAHRGSYGHDNQP--GHVGGVRGVVS--DNL-NQ-IVISGGNDQTVKVWHFKQT-----GKPPLRSI 499 (583)
Q Consensus 433 dg~i~i~d~~--~~~~~~~~~~~~~~--~h~~~v~~~~~--s~~-~~-~l~s~~~dg~i~iwd~~~~-----~~~~~~~~ 499 (583)
+++|.+|++. ++. +..+...... .....+..+++ +|. ++ +++....+|.+..|++... ..++++.+
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 5789999773 333 3333110000 11156777887 774 43 6777888899999998432 11567888
Q ss_pred eccCCeeeEEeccCCcEEEEEeCCceEEEEEcc-----ccceEEeec-cc-ccceeeEEe--cCCCc-EEEEEe-CCCeE
Q psy14906 500 KLDNGISFFRTHQESSMLAVCLDDFTVNIIDID-----TCTIIRKLS-GH-MGQLTDADF--SPDSR-WLITAS-MDCTI 568 (583)
Q Consensus 500 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~-----~~~~~~~~~-~h-~~~v~~l~~--s~d~~-~l~s~~-~d~~i 568 (583)
...+.+..+...+....|+++-++.-|..++.+ +++.+..+. ++ ...+..|++ .++++ +|++++ .++++
T Consensus 177 ~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 177 KMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred cCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 888899999999999999999999777777754 345565542 22 236888887 45555 666555 56799
Q ss_pred EEEeCC-Cccccccc
Q psy14906 569 RVWDIP-SSQLIDCF 582 (583)
Q Consensus 569 ~vw~~~-~~~~~~~~ 582 (583)
.+||.+ +.+.+..|
T Consensus 257 ~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 257 AIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEESSTTCCEEEEE
T ss_pred EEEECCCCCcEEEEE
Confidence 999996 67777665
|
| >3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B | Back alignment and structure |
|---|
Probab=98.49 E-value=0.00014 Score=66.08 Aligned_cols=160 Identities=8% Similarity=-0.021 Sum_probs=101.4
Q ss_pred CceEEEEccCCc-EEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee--cCCcEEEEEccC
Q psy14906 414 KPTCVYITHCGN-FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG--NDQTVKVWHFKQ 490 (583)
Q Consensus 414 ~i~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~--~dg~i~iwd~~~ 490 (583)
.+..+++.+.+. +.++-...+.|.++++......... .........+++.|.+..|+.+. ..+.|...+++.
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~-----~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 154 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLF-----WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG 154 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-----CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEE-----eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC
Confidence 466788887554 4455556788999998654332222 23445678999998765555444 357788887765
Q ss_pred CCCCceEEee-ccCCeeeEEeccCCcEEEEEe-CCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeE
Q psy14906 491 TGKPPLRSIK-LDNGISFFRTHQESSMLAVCL-DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568 (583)
Q Consensus 491 ~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i 568 (583)
. ....... .-.....++++|++..|..+. ..+.|..+|++.......+.+.......+++. .+..+.+-...+.|
T Consensus 155 ~--~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V 231 (318)
T 3sov_A 155 S--SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSI 231 (318)
T ss_dssp C--SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEE
T ss_pred C--CeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeE
Confidence 4 2222222 224678999999777666554 46789999987443322233334456677775 34455566667889
Q ss_pred EEEeCCCcccccc
Q psy14906 569 RVWDIPSSQLIDC 581 (583)
Q Consensus 569 ~vw~~~~~~~~~~ 581 (583)
..++..+|+.++.
T Consensus 232 ~~~~~~~G~~~~~ 244 (318)
T 3sov_A 232 LACNKYTGEGLRE 244 (318)
T ss_dssp EEEETTTCCSCEE
T ss_pred EEEECCCCCceEE
Confidence 9999888876554
|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
Probab=98.49 E-value=0.00035 Score=65.95 Aligned_cols=233 Identities=8% Similarity=-0.056 Sum_probs=140.3
Q ss_pred EEEEEcCCeEEEEeccceeeeeecccCccEEEE--ccCCCEEEEEe-CCCcEEEEEcCCCc----EEEEeeccCCceEEe
Q psy14906 85 HIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLI--LPFGPHLISVD-EESNVKVWDIKAEE----TYLELSFDNDTFKIM 157 (583)
Q Consensus 85 ~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~-~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~ 157 (583)
++..+....|+..++.+.....+......+..+ .+.+..|..+. ..+.|+.+++.... ....+.
T Consensus 85 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~--------- 155 (400)
T 3p5b_L 85 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS--------- 155 (400)
T ss_dssp EEEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC---------
T ss_pred eeEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe---------
Confidence 555666788988888665443343344455555 56566665554 45778888876522 222221
Q ss_pred cccCCcceEEEeeCCCCCEE-EEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcC-CCcEEEEeCC
Q psy14906 158 GKRWNSCVNVLEPSPVVDII-GVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSN-TGHLTVWNLE 235 (583)
Q Consensus 158 ~~~~~~~i~~~~~s~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~-dg~i~vwd~~ 235 (583)
........+++.+.+..| ++-...+.|.+.++........+.........|++.|.+..++++-.. .+.|...++.
T Consensus 156 --~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 156 --RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp --SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred --CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 234567889999855544 444567889999987554444444444568999999976634444422 4789999987
Q ss_pred CCeehhhhhhccccceEEEEEecCCCEEEEEeC-CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee
Q psy14906 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 236 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 314 (583)
... ...+....-.....|++++++..|+.+.. .+.|..++++.. ..+.+......-.....+++. .+..+++-.
T Consensus 234 G~~-~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~--~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~ 308 (400)
T 3p5b_L 234 GVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILEDEKRLAHPFSLAVF--EDKVFWTDI 308 (400)
T ss_dssp SCS-CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--CCEEEEECSSTTSSEEEEEEE--TTEEEEEES
T ss_pred CCc-cEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC--ccEEEEeCCCCCCCCEEEEEe--CCEEEEecC
Confidence 433 22221223356789999988777766654 567777766432 233333222223345677764 455666666
Q ss_pred CCCcEEEEEccccccceee
Q psy14906 315 GDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 315 ~dg~i~iwd~~~~~~~~~~ 333 (583)
..+.|..+|..+++....+
T Consensus 309 ~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 309 INEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp SSCSEEEEESSSCCCCEEE
T ss_pred CCCeEEEEEcCCCCceEEE
Confidence 6788999997777665554
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=98.40 E-value=0.00021 Score=68.09 Aligned_cols=157 Identities=10% Similarity=0.039 Sum_probs=96.5
Q ss_pred CCceEEEEcc-CCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEE-EEeecCCcEEEEEccC
Q psy14906 413 SKPTCVYITH-CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIV-ISGGNDQTVKVWHFKQ 490 (583)
Q Consensus 413 ~~i~~~~~s~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~~ 490 (583)
.....++++| +|.+.++-..++.|+.++..++.....+.. .+....-..++|+|+++.| ++-...+.|+.+++..
T Consensus 228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~---~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVM---MDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEE---CSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEec---cCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 3466788999 566666666778899999887765222211 1122233479999999855 4445567899988763
Q ss_pred CCCCc--eEEeec----------------cCCeeeEEe---------ccCCcEEEEEeCCceEEEEEccccceEEeeccc
Q psy14906 491 TGKPP--LRSIKL----------------DNGISFFRT---------HQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGH 543 (583)
Q Consensus 491 ~~~~~--~~~~~~----------------~~~v~~~~~---------s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h 543 (583)
..... ...+.. -.....+++ .++|.++++-...+.|+.++. +|... .+.+.
T Consensus 305 ~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~-t~~G~ 382 (433)
T 4hw6_A 305 ETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT-TYAGR 382 (433)
T ss_dssp TTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE-EEECC
T ss_pred CCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE-EEEeC
Confidence 21121 111111 123566888 677777777667789999985 45433 22211
Q ss_pred ------------------ccceeeEEec-CCCcEEEEEeCCCeEEEEeCC
Q psy14906 544 ------------------MGQLTDADFS-PDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 544 ------------------~~~v~~l~~s-~d~~~l~s~~~d~~i~vw~~~ 574 (583)
-.....|+++ +++.++++=...+.|+..+++
T Consensus 383 g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 383 GNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 1236678998 667666665666788887764
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=98.39 E-value=7.2e-05 Score=67.13 Aligned_cols=198 Identities=10% Similarity=0.192 Sum_probs=122.4
Q ss_pred EEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecC----CC---EEEEEe-C--CCeEEEEEccCCCCCceeeE
Q psy14906 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN----EP---LLVTSS-P--DNTLKLWIFDKADGNGRLLR 288 (583)
Q Consensus 219 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~s~~-~--d~~i~~w~~~~~~~~~~~~~ 288 (583)
+++.....+-+.+||+ +++.++.+ . .+.++.+..-|+ |+ ++++.. . +++|.+|+++..... +.
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~~-~--~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~---l~ 114 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHSY-N--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT---LQ 114 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEEE-C--CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC---EE
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEEc-c--CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc---ee
Confidence 6666667788999999 68888777 2 255666666553 22 233333 3 589999988754332 33
Q ss_pred Eecc------CC-CCCeeEEE--eeCCCC-EEEEeeCCCcEEEEEccccc---cceeeccchhhhhhhhhhcchhccccc
Q psy14906 289 IREG------HS-APPNYIQF--YGNSSD-NILSAAGDSTLRIFNTKSET---SNKNLGIASANRNNLKRKNRLEKMNEK 355 (583)
Q Consensus 289 ~~~~------~~-~~v~~~~~--~~~~~~-~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (583)
.... .. ..+..+++ +|.++. +++....+|.+..|++.... ....
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~----------------------- 171 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGK----------------------- 171 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEE-----------------------
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccce-----------------------
Confidence 3311 11 56677887 553454 67888888999999884321 1000
Q ss_pred cCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCce
Q psy14906 356 FILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGH 435 (583)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 435 (583)
.++-+.+. ..+..+...+....|+++-++..
T Consensus 172 ------------------------------lVR~f~lg-------------------sq~EgcvvDd~~g~Lyv~eEd~G 202 (355)
T 3amr_A 172 ------------------------------KVRAFKMN-------------------SQTEGMAADDEYGRLYIAEEDEA 202 (355)
T ss_dssp ------------------------------EEEEEECS-------------------SCEEEEEEETTTTEEEEEETTTE
T ss_pred ------------------------------EEEEecCC-------------------CCcceEEEcCCCCeEEEecccce
Confidence 11111111 45778888998999999999877
Q ss_pred EEEEEcc-----cCccccccCCCCCCCcccCeeEEEEe--CCCc-EEEEee-cCCcEEEEEcc-CCCCCceEEee
Q psy14906 436 VDRFNIQ-----SGAHRGSYGHDNQPGHVGGVRGVVSD--NLNQ-IVISGG-NDQTVKVWHFK-QTGKPPLRSIK 500 (583)
Q Consensus 436 i~i~d~~-----~~~~~~~~~~~~~~~h~~~v~~~~~s--~~~~-~l~s~~-~dg~i~iwd~~-~~~~~~~~~~~ 500 (583)
|..|+.. +++.+..+.. ..-...+..|++- ++++ +|+.++ .+.++.+||.. +. +.+..+.
T Consensus 203 Iw~~da~p~~~~~~~~v~~~~~---g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~--~~vg~f~ 272 (355)
T 3amr_A 203 IWKFSAEPDGGSNGTVIDRADG---RHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKN--KYVADFR 272 (355)
T ss_dssp EEEEECSTTSCSCCEEEEEBSS---SSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTC--CEEEEEE
T ss_pred EEEEeCCcCCCCCceEEEEecC---CccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCC--cEEEEEE
Confidence 8888855 2333433311 1223468888884 4555 555544 67899999996 44 5666654
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=98.30 E-value=0.0021 Score=58.86 Aligned_cols=259 Identities=11% Similarity=0.041 Sum_probs=140.1
Q ss_pred CCCceEEEEeeCCeEEEEecCCc---EEEeec-CCCCCCeEEEEeeC-eEEEEEcCCeEEEEeccceeeeeec---ccCc
Q psy14906 41 RRKETLFVTCVGKAFHVYGCNHF---KLLSVS-PQHEDDITCLSSDF-FHIYTSANNIIYAWRRGIDIVGTYK---GHTS 112 (583)
Q Consensus 41 ~~~~~~i~~~~~~~i~v~d~~~~---~~~~~~-~~h~~~v~~~~~~~-~~~~~~~~~~i~vw~~~~~~~~~~~---~h~~ 112 (583)
......++.+..+.|.. ..+.+ +.+..- ......+.++++++ .+.+++..+.|..-.-.++.-.... .+.+
T Consensus 44 ~~~~~~~~~G~~g~i~~-s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~ 122 (327)
T 2xbg_A 44 IDRHHGWLVGVNATLME-TRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPG 122 (327)
T ss_dssp SSSSCEEEEETTTEEEE-ESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEETTEEEEESSTTSSCEECCCCTTCSS
T ss_pred CCCCcEEEEcCCCeEEE-eCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECCCeEEEECCCCCCceECccccCCCC
Confidence 33333444556665533 33323 444321 22345678888865 5555666776655332333222222 2334
Q ss_pred cEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEE
Q psy14906 113 PVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHN 190 (583)
Q Consensus 113 ~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~ 190 (583)
.+..+ .+++..++.+ .+|.|.. ..+.|+.-..... .....+..+++.+++.+++++...+..+-+|
T Consensus 123 ~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~----------~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d 190 (327)
T 2xbg_A 123 SPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQ----------EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWE 190 (327)
T ss_dssp CEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEEC----------SCCCCEEEEEECTTSCEEEEETTSSEEEEEC
T ss_pred CeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeec----------CCCcceEEEEEcCCCcEEEEECCCcEEEEeC
Confidence 45665 4555555554 4564422 2233544443331 3456788999999998887765443333333
Q ss_pred c--cCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhc---cccceEEEEEecCCCEEEE
Q psy14906 191 I--LTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA---HRKVVTGAHFLYNEPLLVT 265 (583)
Q Consensus 191 ~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s 265 (583)
- .+.+.+. ......+..+.+.+++. ++ ..+.+|.+++.+...++.-..+... +...+.++.+.+++..++.
T Consensus 191 ~gG~tW~~~~--~~~~~~~~~~~~~~~g~-~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 266 (327)
T 2xbg_A 191 PGQTAWEPHN--RTTSRRLHNMGFTPDGR-LW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLA 266 (327)
T ss_dssp TTCSSCEEEE--CCSSSCEEEEEECTTSC-EE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEE
T ss_pred CCCCceeECC--CCCCCccceeEECCCCC-EE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEE
Confidence 2 2223331 23346788999999987 44 4455788877753334332222111 2345889999988877666
Q ss_pred EeCCCeEEEEEccCCCCCceeeEEec---cCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEc
Q psy14906 266 SSPDNTLKLWIFDKADGNGRLLRIRE---GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324 (583)
Q Consensus 266 ~~~d~~i~~w~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 324 (583)
+. ++.+ .+..|. ++.-..+. .....+..+.|.+ +..++.++.+|.|.-++-
T Consensus 267 g~-~g~i-~~S~Dg----G~tW~~~~~~~~~~~~~~~v~~~~--~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 267 GG-AGAL-LCSQDG----GQTWQQDVDVKKVPSNFYKILFFS--PDQGFILGQKGILLRYVT 320 (327)
T ss_dssp ES-TTCE-EEESST----TSSCEECGGGTTSSSCCCEEEEEE--TTEEEEECSTTEEEEECC
T ss_pred eC-CCeE-EEeCCC----CcccEEcCccCCCCCCeEEEEEEC--CCceEEEcCCceEEEEcC
Confidence 54 6655 332231 22222222 2345678899874 445777778898776653
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.29 E-value=0.0012 Score=67.70 Aligned_cols=236 Identities=9% Similarity=0.015 Sum_probs=135.2
Q ss_pred EEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEE-EEeCCCeEEEEEccCCCCCceeeEEeccCCCCC
Q psy14906 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV-TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP 297 (583)
Q Consensus 219 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v 297 (583)
+|+... ...|+..++...+....+ .....+..++|.+.+..|+ +-...+.|+.++++...........+......+
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~--~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred cccccc-ccceeEeeccCCcceeee--cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 344333 356888888765433323 2345678999998655554 444567788786653211112223333344566
Q ss_pred eeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccE
Q psy14906 298 NYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNI 377 (583)
Q Consensus 298 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (583)
..|++.+..+++.++-...+.|.+.++..... ..+.
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~-~~l~------------------------------------------- 509 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLF------------------------------------------- 509 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEE-------------------------------------------
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCeE-EEEE-------------------------------------------
Confidence 78999864444555555677888888764321 1110
Q ss_pred EEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec--CceEEEEEcccCccccccCCCCC
Q psy14906 378 AAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS--SGHVDRFNIQSGAHRGSYGHDNQ 455 (583)
Q Consensus 378 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~ 455 (583)
. ........|+++|.+.+|+.... .+.|...++........+
T Consensus 510 -------------~------------------~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv----- 553 (791)
T 3m0c_C 510 -------------R------------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV----- 553 (791)
T ss_dssp -------------E------------------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE-----
T ss_pred -------------e------------------CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE-----
Confidence 0 00035778999998666666553 267888888654443333
Q ss_pred CCcccCeeEEEEeCCCcEEEEee-cCCcEEEEEccCCCCCceEEeecc---CCeeeEEeccCCcEEEEE-eCCceEEEEE
Q psy14906 456 PGHVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQTGKPPLRSIKLD---NGISFFRTHQESSMLAVC-LDDFTVNIID 530 (583)
Q Consensus 456 ~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~-~~dg~i~i~d 530 (583)
...-.....|++++.+..|+.+. ....|...++... .....+... .....|++. +..|+.. ...+.|...|
T Consensus 554 ~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~--~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 554 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSAN 629 (791)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC--ceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEe
Confidence 23345788999997766665554 4567888888765 333333321 234456653 3344444 4567888888
Q ss_pred ccccceEEeec
Q psy14906 531 IDTCTIIRKLS 541 (583)
Q Consensus 531 ~~~~~~~~~~~ 541 (583)
..+|+.+..+.
T Consensus 630 k~tG~~~~~l~ 640 (791)
T 3m0c_C 630 RLTGSDVNLLA 640 (791)
T ss_dssp TTTCCCCEEEE
T ss_pred CCCCcceEEee
Confidence 77776555543
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.29 E-value=0.0011 Score=63.16 Aligned_cols=161 Identities=11% Similarity=0.070 Sum_probs=95.6
Q ss_pred CceEEEEccCC-cEEEEEecCceEEEEEcc-------cCcc-----------ccccCCCCCCCcccCeeEEEEeCCCcEE
Q psy14906 414 KPTCVYITHCG-NFVLIGYSSGHVDRFNIQ-------SGAH-----------RGSYGHDNQPGHVGGVRGVVSDNLNQIV 474 (583)
Q Consensus 414 ~i~~~~~s~~~-~~l~~~~~dg~i~i~d~~-------~~~~-----------~~~~~~~~~~~h~~~v~~~~~s~~~~~l 474 (583)
....++++|++ .++++-..++.|+.+|+. ++.. ...+.. .+.......++|+|++++|
T Consensus 248 ~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~---~~~~~~p~~ia~~p~G~~l 324 (496)
T 3kya_A 248 QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFT---IADPSWEFQIFIHPTGKYA 324 (496)
T ss_dssp CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEE---CSSSSCCEEEEECTTSSEE
T ss_pred CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEe---cCCCCCceEEEEcCCCCEE
Confidence 45678899954 555566678889999998 5543 011100 1233456899999999954
Q ss_pred -EEeecCCcEEEEEccCCCCCc--eEEeecc----------------CCee-eEEec-------cCCcEEEEEeCCceEE
Q psy14906 475 -ISGGNDQTVKVWHFKQTGKPP--LRSIKLD----------------NGIS-FFRTH-------QESSMLAVCLDDFTVN 527 (583)
Q Consensus 475 -~s~~~dg~i~iwd~~~~~~~~--~~~~~~~----------------~~v~-~~~~s-------~~~~~l~~~~~dg~i~ 527 (583)
++-.....|+.++........ ...+... .... .++.. ++|.++++-...++|+
T Consensus 325 YvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr 404 (496)
T 3kya_A 325 YFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVR 404 (496)
T ss_dssp EEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEE
T ss_pred EEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEE
Confidence 444566788887765431111 0122111 1233 34443 4566666666678899
Q ss_pred EEEccccceEEeeccc------------------------ccceeeEEecCC-CcEEEEEeCCCeEEEEeCCCcccc
Q psy14906 528 IIDIDTCTIIRKLSGH------------------------MGQLTDADFSPD-SRWLITASMDCTIRVWDIPSSQLI 579 (583)
Q Consensus 528 i~d~~~~~~~~~~~~h------------------------~~~v~~l~~s~d-~~~l~s~~~d~~i~vw~~~~~~~~ 579 (583)
.++ .+|.. .++.+. -.....|+++++ +.+.++=.....|+.++++.....
T Consensus 405 ~i~-~~G~v-~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~ 479 (496)
T 3kya_A 405 KVT-PEGIV-STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENV 479 (496)
T ss_dssp EEC-TTCBE-EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC--
T ss_pred EEe-CCCCE-EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCccc
Confidence 998 45543 333221 123668999997 766666666789999998765544
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.22 E-value=0.0016 Score=62.11 Aligned_cols=233 Identities=12% Similarity=0.041 Sum_probs=134.8
Q ss_pred cccEEEEEe-CCCceEEEEeeCCeEEEEecCCcEEEeecCC---CCCCeEEEEe---------eCe-EEEEEcCC-----
Q psy14906 32 LPVVARFIR-RRKETLFVTCVGKAFHVYGCNHFKLLSVSPQ---HEDDITCLSS---------DFF-HIYTSANN----- 92 (583)
Q Consensus 32 ~~~~~~~~p-~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~---h~~~v~~~~~---------~~~-~~~~~~~~----- 92 (583)
.|..+++.| +...++++....+.|++.|++++.+...... .......+++ +++ ++++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899988 4556555555567899999999877765543 2234677777 455 55555443
Q ss_pred --eEEEEeccc--eee-----eeec--ccCccEEEEccCCCEEE-EEeCCCcEEEEEcC-------CCcE----------
Q psy14906 93 --IIYAWRRGI--DIV-----GTYK--GHTSPVHLILPFGPHLI-SVDEESNVKVWDIK-------AEET---------- 143 (583)
Q Consensus 93 --~i~vw~~~~--~~~-----~~~~--~h~~~v~~is~~~~~l~-s~~~dg~i~iwd~~-------~~~~---------- 143 (583)
.|.+.+... ... +.+. .|...+ +++|++.+|+ +-..++.|..+|++ ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~gi-avdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGA-TIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCE-EECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEE-EEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 366665432 221 1222 233333 4578555555 44567789999987 5543
Q ss_pred -EEEe-eccCCceEEecccCCcceEEEeeCCCCCEEEEE-ecCCeEEEEEccC--Cce--eEEEecc---C---------
Q psy14906 144 -YLEL-SFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG-LSNKKIILHNILT--DES--LMEFIQT---W--------- 204 (583)
Q Consensus 144 -~~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~d~~i~iw~~~~--~~~--~~~~~~~---~--------- 204 (583)
...+ .. ........|+|+|+|+.|.++ +..+.|+.++... +.. ...+.+. .
T Consensus 299 ~~~~l~~~----------~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~ 368 (496)
T 3kya_A 299 TFKQLFTI----------ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTE 368 (496)
T ss_dssp TEEEEEEC----------SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGG
T ss_pred ccceeEec----------CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccc
Confidence 1121 11 223456899999999965444 5567888866542 221 1222221 0
Q ss_pred ---CCeE-EEEEe-------cCCCCEEEEEcCCCcEEEEeCCCCeehhhhhh-------------c----------cccc
Q psy14906 205 ---GPVT-ALSFR-------TDGPPMMVSGSNTGHLTVWNLEDRQVENQIKK-------------A----------HRKV 250 (583)
Q Consensus 205 ---~~v~-~~~~~-------~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-------------~----------~~~~ 250 (583)
.... .+... +++. ++++-..+..|+.++. ++.. .++.. + .-..
T Consensus 369 a~f~~P~~gv~vd~~~~~~~~~g~-lyVaD~~N~rIr~i~~-~G~v-~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~ 445 (496)
T 3kya_A 369 ARMNNPCQGVFVKNPDYTGEEEYD-FYFVDRLNFCVRKVTP-EGIV-STYAGRGASTSLADGNQWGTDDGDLREVARFRD 445 (496)
T ss_dssp CBCSSEEEEEEEECTTCCSSCCEE-EEEEEGGGTEEEEECT-TCBE-EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSS
T ss_pred cccCCCeEEEEEccccccccCCCe-EEEEECCCCEEEEEeC-CCCE-EEEecccccccccCccccccCCCCchhhhhcCC
Confidence 1234 34444 4555 6666677888999984 4432 22200 1 1124
Q ss_pred eEEEEEecC-CCEEEEEeCCCeEEEEEcc
Q psy14906 251 VTGAHFLYN-EPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 251 v~~~~~~~~-~~~l~s~~~d~~i~~w~~~ 278 (583)
...|++.++ +.++++=...+.|+.++++
T Consensus 446 P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 446 VSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 678999986 6665555566788888664
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=98.22 E-value=2.4e-05 Score=79.58 Aligned_cols=243 Identities=9% Similarity=0.010 Sum_probs=133.9
Q ss_pred CCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEe-CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEee
Q psy14906 226 TGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS-PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304 (583)
Q Consensus 226 dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 304 (583)
...|+..++...+....+ . ....+..++|.+.+..|+.+. ..+.|+.++++...........+......+..+++.+
T Consensus 385 ~~~I~~id~~~~~~~~~~-~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLI-P-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp TTC-CEECTTSCCEECCS-C-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred ccceEEEeCCCCcceeee-c-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 357888888876554444 2 234567889998776666554 4577888866531000111111111122345677765
Q ss_pred CCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCC
Q psy14906 305 NSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGK 384 (583)
Q Consensus 305 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (583)
..+.++++-...+.|.++++........+.
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~-------------------------------------------------- 492 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFR-------------------------------------------------- 492 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEECC--------------------------------------------------
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEEe--------------------------------------------------
Confidence 344455554556778887765432111000
Q ss_pred ceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec--CceEEEEEcccCccccccCCCCCCCcccCe
Q psy14906 385 NKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS--SGHVDRFNIQSGAHRGSYGHDNQPGHVGGV 462 (583)
Q Consensus 385 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v 462 (583)
........++++|.+.+|+.... .+.|.++++......... ...-...
T Consensus 493 -------------------------~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~-----~~~l~~P 542 (699)
T 1n7d_A 493 -------------------------EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-----TENIQWP 542 (699)
T ss_dssp -------------------------CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEES-----CSSCSSC
T ss_pred -------------------------CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEE-----eCCCCCc
Confidence 00034567888887666665543 267887776533222211 1223456
Q ss_pred eEEEEeCCCcEE-EEeecCCcEEEEEccCCCCCceEEeec---cCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEE
Q psy14906 463 RGVVSDNLNQIV-ISGGNDQTVKVWHFKQTGKPPLRSIKL---DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIR 538 (583)
Q Consensus 463 ~~~~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~ 538 (583)
..|+++|++..| ++-...+.|..+++... .....+.. ......+++..+ .++++....+.|..++..+++.+.
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~--~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVN 619 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSSS--CCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEE
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCCC--ceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceE
Confidence 789999876544 44456678999998754 33322221 123445566443 444455566899999998888877
Q ss_pred eecccccceeeEEec
Q psy14906 539 KLSGHMGQLTDADFS 553 (583)
Q Consensus 539 ~~~~h~~~v~~l~~s 553 (583)
.+.........|++.
T Consensus 620 ~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 620 LLAENLLSPEDMVLF 634 (699)
T ss_dssp CCCTTCSSCCCCCBC
T ss_pred EeecCCCCCcEEEEe
Confidence 765433345555543
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=98.21 E-value=0.0027 Score=58.30 Aligned_cols=268 Identities=14% Similarity=0.177 Sum_probs=164.3
Q ss_pred CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEE
Q psy14906 130 ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTA 209 (583)
Q Consensus 130 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~ 209 (583)
+..|.|-|+.++..+.+.+.. . -+.-.+|..+.||.-. ..++.|+|+++.+.++.+.-. ..|.-
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~----------A----dsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~-e~Vvf 110 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPIS----------A----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTF 110 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECC----------C----SEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCE
T ss_pred CCeEEEEECCCCCcceecccc----------c----ceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC-CCceE
Confidence 447888888886655444321 1 2344678888777765 679999999999999988877 46777
Q ss_pred EEEecCCCCEEEEEcCCCcEEEEeCCCC-eehhhhhhcc----ccceEEEEEecCCCEEEEEeC-------CCeEEEEEc
Q psy14906 210 LSFRTDGPPMMVSGSNTGHLTVWNLEDR-QVENQIKKAH----RKVVTGAHFLYNEPLLVTSSP-------DNTLKLWIF 277 (583)
Q Consensus 210 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~-------d~~i~~w~~ 277 (583)
=.|-.+.. |+-.+ +..|.-|+++.. .+.+.+ .-| ...|..-..+++.++++..|- .|.+.+|..
T Consensus 111 WkWis~~~--l~lVT-~taVyHWsi~~~s~P~kvF-dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~ 186 (494)
T 1bpo_A 111 WKWISLNT--VALVT-DNAVYHWSMEGESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV 186 (494)
T ss_dssp EEEEETTE--EEEEC-SSEEEEEESSSSCCCEEEE-ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEES
T ss_pred EEecCCCe--EEEEc-CCeeEEecccCCCCchhhe-ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeec
Confidence 77877664 44444 357999999753 333333 222 356777788899998775542 377889966
Q ss_pred cCCCCCceeeEEeccCCCCCeeEEEee--CCCCEEEEeeC---CCcEEEEEccccc-cceeeccchhhhhhhhhhcchhc
Q psy14906 278 DKADGNGRLLRIREGHSAPPNYIQFYG--NSSDNILSAAG---DSTLRIFNTKSET-SNKNLGIASANRNNLKRKNRLEK 351 (583)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~---dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 351 (583)
+ .+..+.+.||.+....+.... .....+..+.. .+.+++.++.... ....+
T Consensus 187 e-----r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f------------------ 243 (494)
T 1bpo_A 187 D-----RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF------------------ 243 (494)
T ss_dssp T-----TCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCC------------------
T ss_pred c-----ccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCc------------------
Confidence 3 455677788865443333221 00123333332 2566666664320 00000
Q ss_pred cccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe
Q psy14906 352 MNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY 431 (583)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 431 (583)
..-.. +..+.+ .....-..++..++.-..++.-+
T Consensus 244 ----------~kk~v--------------------------------dv~fpp----e~~~DFPvamqvs~kygviyviT 277 (494)
T 1bpo_A 244 ----------PKKAV--------------------------------DVFFPP----EAQNDFPVAMQISEKHDVVFLIT 277 (494)
T ss_dssp ----------CCEEE--------------------------------ECCCCT----TSTTCCEEEEEEETTTTEEEEEE
T ss_pred ----------cceee--------------------------------eeeCCc----ccccCceeEEEecccCCEEEEEe
Confidence 00000 000000 01113466888999989999999
Q ss_pred cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC
Q psy14906 432 SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 432 ~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 491 (583)
.-|.|++||++++.++..- +-....|..-+......-++.....|.|.--.++..
T Consensus 278 K~G~i~lyDleTgt~i~~n-----rIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 278 KYGYIHLYDLETGTCIYMN-----RISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp TTSEEEEEETTTCCEEEEE-----ECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTT
T ss_pred cCceEEEEecccceeeeee-----cccCCceEEecccCCCCcEEEEccCceEEEEEEccc
Confidence 9999999999999988766 344555665555555555666667777766666554
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.20 E-value=0.0016 Score=66.81 Aligned_cols=233 Identities=8% Similarity=-0.061 Sum_probs=132.1
Q ss_pred EEEEEcCCeEEEEeccceeeeeecccCccEEEE--ccCCCEEEEE-eCCCcEEEEEcCCCc----EEEEeeccCCceEEe
Q psy14906 85 HIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLI--LPFGPHLISV-DEESNVKVWDIKAEE----TYLELSFDNDTFKIM 157 (583)
Q Consensus 85 ~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~-~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~ 157 (583)
++..+....|+..++.+.....+......+..| .+.+..|+.+ ...+.|+.+++.... ....+.
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~--------- 467 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS--------- 467 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC---------
T ss_pred ccccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe---------
Confidence 444555567777776543333333333444555 5544555544 445778888877531 122221
Q ss_pred cccCCcceEEEeeCCCCCEEEE-EecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCC-CcEEEEeCC
Q psy14906 158 GKRWNSCVNVLEPSPVVDIIGV-GLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT-GHLTVWNLE 235 (583)
Q Consensus 158 ~~~~~~~i~~~~~s~~~~~l~~-~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g~i~vwd~~ 235 (583)
........|++.+.++.|.. -...+.|.+.++........+.........|++.|.+.+++++-... +.|...++.
T Consensus 468 --~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 468 --RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp --SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred --cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 23455678999887765554 45568999999874443333334445689999999866344444333 679999987
Q ss_pred CCeehhhhhhccccceEEEEEecCCCEEEEEeC-CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee
Q psy14906 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 236 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 314 (583)
.... ..+....-.....|++.+.+..|+.+.. .+.|...+++.. ....+......-.....|++. .+.++++-.
T Consensus 546 G~~~-~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~--~~~~v~~~~~~l~~P~glav~--~~~lYwtD~ 620 (791)
T 3m0c_C 546 GVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILEDEKRLAHPFSLAVF--EDKVFWTDI 620 (791)
T ss_dssp SCCE-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEEECTTTTSSEEEEEEE--TTEEEEEET
T ss_pred CCce-EEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC--ceEEEecCCCccCCCCEEEEe--CCEEEEEEC
Confidence 4433 3331233357889999987776666653 456777755422 222222211122234566664 344444545
Q ss_pred CCCcEEEEEccccccceee
Q psy14906 315 GDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 315 ~dg~i~iwd~~~~~~~~~~ 333 (583)
..+.|...|..+++....+
T Consensus 621 ~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 621 INEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp TTTEEEEEETTTCCCCEEE
T ss_pred CCCEEEEEeCCCCcceEEe
Confidence 6678888887777655444
|
| >3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A | Back alignment and structure |
|---|
Probab=98.09 E-value=0.015 Score=60.41 Aligned_cols=461 Identities=10% Similarity=0.026 Sum_probs=237.4
Q ss_pred ccceeeeeeeee-eecCcccEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecC-CCCCCeEEEEee--CeEEEEEcC
Q psy14906 16 SKIFLRHRALGY-VSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSP-QHEDDITCLSSD--FFHIYTSAN 91 (583)
Q Consensus 16 ~~~~~~~~~~g~-~~~~~~~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~-~h~~~v~~~~~~--~~~~~~~~~ 91 (583)
.+-++.|+-+.. .++.... +...|.+..+-+++.++ +..||-.+.+...... .....|.++..| +.+-+++.
T Consensus 6 ~~~~~~f~~~~~gl~~n~V~--~I~qD~~G~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigT~- 81 (758)
T 3ott_A 6 KVNYQQFDNIYLGAEASVVS--CFLQDSEGLIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTYLYMGTD- 81 (758)
T ss_dssp ---CCCCEEECCCSSCCCEE--EEEECTTSCEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTTEEEEEET-
T ss_pred CcchhhhhccccccccceEE--EEEECCCCCEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCCcEEEEeC-
Confidence 344555554431 2233333 33447777766666555 6677854433222111 134568888764 45666654
Q ss_pred CeEEEEeccceeeeee-cccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEee
Q psy14906 92 NIIYAWRRGIDIVGTY-KGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEP 170 (583)
Q Consensus 92 ~~i~vw~~~~~~~~~~-~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 170 (583)
+.+..+|......... ......|.++..++..|..++.+ -|..+|..+++... +..... ......|.++..
T Consensus 82 ~Gl~~yd~~~~~f~~~~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~-~~~~~~------~l~~~~i~~i~~ 153 (758)
T 3ott_A 82 NGILVYNYRADRYEQPETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTS-FDTRRN------GLPNNTIYSIIR 153 (758)
T ss_dssp TEEEEEETTTTEECCCSCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEE-ECHHHH------CCSCSCEEEEEE
T ss_pred CCeEEEeCCCCEEECcccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEE-eccCCC------CcCCCeEEEEEE
Confidence 4578899654322221 11233576663233456666655 68888987765432 210000 012456888888
Q ss_pred CCCCCEEEEEecCCeEEEEEccCCceeEEEecc------CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhh
Q psy14906 171 SPVVDIIGVGLSNKKIILHNILTDESLMEFIQT------WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK 244 (583)
Q Consensus 171 s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 244 (583)
..++.+.+ |+.+ -+..++..+++.. .+... ...|.++...+++. .|..|+. +-+..+|..+++.....
T Consensus 154 d~~g~lWi-gt~~-Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~-~lWigt~-~Gl~~~~~~~~~~~~~~- 227 (758)
T 3ott_A 154 TKDNQIYV-GTYN-GLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQ-CVWIGTE-GYLFQYFPSTGQIKQTE- 227 (758)
T ss_dssp CTTCCEEE-EETT-EEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTT-EEEEEEE-EEEEEEETTTTEEEEEE-
T ss_pred cCCCCEEE-EeCC-CHhhCccCCCceE-EecCCCccccccceeEEEEEECCCC-EEEEEEC-CCCeEEcCCCCeEEecc-
Confidence 88887665 4444 4778887765432 22211 12488888877765 4455554 45888998776543211
Q ss_pred hccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEec-----cCCCCCeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE-----GHSAPPNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 245 ~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
.-....|.++....+|.+.+ |..+| +.++ +............. -....|.++.... ++ .|..|+..| +
T Consensus 228 ~l~~~~i~~i~~d~~g~lWi-gT~~G-l~~~--~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-~g-~lWiGT~~G-l 300 (758)
T 3ott_A 228 AFHNNSIKSLALDGNGDLLA-GTDNG-LYVY--HNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQ-EH-NIWLGTDYG-I 300 (758)
T ss_dssp EEEEEEEEEEEECTTCCEEE-EETTE-EEEE--CCTTSCCEEECCCTTCTTSCSCSCEEEEEECT-TC-CEEEEESSS-E
T ss_pred CCCCCeEEEEEEcCCCCEEE-EeCCc-eeEE--ecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcC-CC-CEEEEeCCc-c
Confidence 12234688888877777554 44444 6666 43222211111000 0123466665542 33 455555555 4
Q ss_pred EEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 320 RIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 320 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
.++... . ..+.+. ...
T Consensus 301 ~~~~~~-~-~~~~~~---------------------------------------------------------~~~----- 316 (758)
T 3ott_A 301 SLSRYN-S-ALQFIP---------------------------------------------------------ISQ----- 316 (758)
T ss_dssp EEECCC-C--CEEEE---------------------------------------------------------HHH-----
T ss_pred cccccC-C-ceeEEe---------------------------------------------------------ccc-----
Confidence 433221 1 000000 000
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcc--ccccCCC--CCCCcccCeeEEEEeCCCcEEE
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH--RGSYGHD--NQPGHVGGVRGVVSDNLNQIVI 475 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~--~~~~h~~~v~~~~~s~~~~~l~ 475 (583)
.........+.++....+|.+-+. +.+| +..++..++.. ...+... ........|.++.-.+++++.+
T Consensus 317 ------~~~~~~~~~v~~i~~D~~g~lWiG-t~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWi 388 (758)
T 3ott_A 317 ------ITGTGDGNQFYSLFRDSKGFYWFG-GANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWI 388 (758)
T ss_dssp ------HSCSCCCCBEEEEEECTTCCEEEE-ETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEE
T ss_pred ------CCCCCCCceEEEEEEcCCCCEEEe-eCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEE
Confidence 000000135777777777765554 4555 66676554321 1111100 0011234688998888887554
Q ss_pred EeecCCcEEEEEccCCCCCceEEe--e-----ccCCeeeEEeccCCcEEEEEeCCceEEEEEcccc-----ceE---Eee
Q psy14906 476 SGGNDQTVKVWHFKQTGKPPLRSI--K-----LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTC-----TII---RKL 540 (583)
Q Consensus 476 s~~~dg~i~iwd~~~~~~~~~~~~--~-----~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-----~~~---~~~ 540 (583)
|. ++-+..||..++ +..... . ....|.++...++|.+ .+|+..+-+..+|.++. ... ..+
T Consensus 389 -gt-~~GL~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l-WigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~ 463 (758)
T 3ott_A 389 -AT-DGSINRYDYATR--QFIHYNIVDNTGTYNTNWTYYIFEDTAGQL-WISTCLGGIFVVDKHKLMQSTSGQYIAEQNY 463 (758)
T ss_dssp -EE-TTEEEEEETTTT--EEEEEEEECCC--CBSSSEEEEEECTTSEE-EEEESSSCEEEEEHHHHHHCCSSEEECSEEE
T ss_pred -Ee-CCcHhhcCcCCC--cEEEeecCCCcCCCCCceEEEEEEcCCCCE-EEEECCCceEEEccccccccCCcceeccccc
Confidence 34 356888998765 332211 1 1234677777666654 44666666888886531 111 111
Q ss_pred c---c-cccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccc
Q psy14906 541 S---G-HMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578 (583)
Q Consensus 541 ~---~-h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~ 578 (583)
. + ....|.++...++|++.+.++..+-|..+|..+++.
T Consensus 464 ~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~ 505 (758)
T 3ott_A 464 SVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINPRTREV 505 (758)
T ss_dssp CGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEETTTTEE
T ss_pred ccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCce
Confidence 1 1 123588898888888766333334477888876654
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=98.03 E-value=0.0012 Score=58.66 Aligned_cols=157 Identities=10% Similarity=-0.002 Sum_probs=96.0
Q ss_pred ceEEEE---ccCCcEEEEEec-------------CceEEEEEcc---cCccccccCCCCC-CC-------cccCeeEEEE
Q psy14906 415 PTCVYI---THCGNFVLIGYS-------------SGHVDRFNIQ---SGAHRGSYGHDNQ-PG-------HVGGVRGVVS 467 (583)
Q Consensus 415 i~~~~~---s~~~~~l~~~~~-------------dg~i~i~d~~---~~~~~~~~~~~~~-~~-------h~~~v~~~~~ 467 (583)
+..+.+ .|+++++++... +..|..||+. +++.......... .+ -......++.
T Consensus 65 ~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvav 144 (334)
T 2p9w_A 65 MSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQ 144 (334)
T ss_dssp EEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEE
T ss_pred eeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEE
Confidence 467888 688777776442 5779999998 7776644321000 00 1134889999
Q ss_pred eCCCcEEEEeecC-CcEEEEEccCCCCCceEEe-ecc-----CCeeeEEeccCCcEEEEEeCCceEEEEEccccce--EE
Q psy14906 468 DNLNQIVISGGND-QTVKVWHFKQTGKPPLRSI-KLD-----NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI--IR 538 (583)
Q Consensus 468 s~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~-~~~-----~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~ 538 (583)
.++|+..++++.. +.|...+.+.. ...... ... ...+.++++|+|+.|++....|.+..+|+.+... +.
T Consensus 145 D~~GnaYVt~s~~~~~I~rV~pdG~--~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~ 222 (334)
T 2p9w_A 145 DRDGNSYVAFALGMPAIARVSADGK--TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEP 222 (334)
T ss_dssp CTTSCEEEEEEESSCEEEEECTTSC--CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEE
T ss_pred CCCCCEEEeCCCCCCeEEEEeCCCC--EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeec
Confidence 9999999988877 77666665543 222111 111 1367899999999888887799999999885432 21
Q ss_pred eec-ccc---cceeeE-EecCCCcE-EEEEeCCCeEEEEeC
Q psy14906 539 KLS-GHM---GQLTDA-DFSPDSRW-LITASMDCTIRVWDI 573 (583)
Q Consensus 539 ~~~-~h~---~~v~~l-~~s~d~~~-l~s~~~d~~i~vw~~ 573 (583)
.-. +.. .....| .--.+|+. |++.+..+.+.+.+-
T Consensus 223 ~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~ 263 (334)
T 2p9w_A 223 VKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSW 263 (334)
T ss_dssp CEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECS
T ss_pred ccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECC
Confidence 110 211 112332 33347777 555556666555543
|
| >2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis} | Back alignment and structure |
|---|
Probab=97.98 E-value=0.0013 Score=58.49 Aligned_cols=159 Identities=13% Similarity=0.218 Sum_probs=109.0
Q ss_pred CCceEEEEccCCcEEEEEe-cCceEEEEEcccCccccccCCCCCC--C-cccCeeEEEE---eCCCcEEEEee-------
Q psy14906 413 SKPTCVYITHCGNFVLIGY-SSGHVDRFNIQSGAHRGSYGHDNQP--G-HVGGVRGVVS---DNLNQIVISGG------- 478 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~--~-h~~~v~~~~~---s~~~~~l~s~~------- 478 (583)
....++.|++....+.+++ ..|.|..|+...+...... .+... + ....+..+.+ .|+++++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~-~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVV-IDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNF 91 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEEC-CTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEe-cCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccc
Confidence 4567889988655555555 7899999998755433221 11001 1 1224689999 68888877543
Q ss_pred ------cCCcEEEEEcc---CCCCCceEEeecc--------------CCeeeEEeccCCcEEEEEeCC-ceEEEEEcccc
Q psy14906 479 ------NDQTVKVWHFK---QTGKPPLRSIKLD--------------NGISFFRTHQESSMLAVCLDD-FTVNIIDIDTC 534 (583)
Q Consensus 479 ------~dg~i~iwd~~---~~~~~~~~~~~~~--------------~~v~~~~~s~~~~~l~~~~~d-g~i~i~d~~~~ 534 (583)
.+..|..+|+. ++ +.+...... .....++..++|+..++++.. +.|...+.+..
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg--~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENS--KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTC--CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred cccccCCCCEEEEEcCCcCCCC--CEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 26779999998 66 565554421 247889999999999988888 88777776643
Q ss_pred ceEEee--c----ccccceeeEEecCCCcEEEEEeCCCeEEEEeCCC
Q psy14906 535 TIIRKL--S----GHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575 (583)
Q Consensus 535 ~~~~~~--~----~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~ 575 (583)
. +..+ . ......+.|+++|||+.|+....++.|..+|+.+
T Consensus 170 ~-~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 170 T-VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp C-EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred E-EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 2 2221 1 1122367999999999988887799999999874
|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
Probab=97.98 E-value=0.00013 Score=74.21 Aligned_cols=160 Identities=9% Similarity=-0.005 Sum_probs=96.2
Q ss_pred ceEEEEccCCc-EEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec--CCcEEEEEccCC
Q psy14906 415 PTCVYITHCGN-FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN--DQTVKVWHFKQT 491 (583)
Q Consensus 415 i~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~--dg~i~iwd~~~~ 491 (583)
+..+++.+.+. ++++-...+.|.++++........+ .........++++|.+.+|+.+.. .+.|...++...
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~-----~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF-----REQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 529 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEEC-----CCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEE-----eCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC
Confidence 45677775544 4444455678988887654433332 222345678899997655554432 267887777654
Q ss_pred CCCceEEee-ccCCeeeEEeccCCcEEEEEe-CCceEEEEEccccceEEeec--ccccceeeEEecCCCcEEEEEeCCCe
Q psy14906 492 GKPPLRSIK-LDNGISFFRTHQESSMLAVCL-DDFTVNIIDIDTCTIIRKLS--GHMGQLTDADFSPDSRWLITASMDCT 567 (583)
Q Consensus 492 ~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~--~h~~~v~~l~~s~d~~~l~s~~~d~~ 567 (583)
....... .-.....|+++|++..|+.+. ..+.|..+++........+. ........|++..+ .++++....+.
T Consensus 530 --~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~ 606 (699)
T 1n7d_A 530 --DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEA 606 (699)
T ss_dssp --CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTC
T ss_pred --CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCe
Confidence 2222221 224577899999876555554 56789999987543322222 12233456666544 45555566789
Q ss_pred EEEEeCCCccccccc
Q psy14906 568 IRVWDIPSSQLIDCF 582 (583)
Q Consensus 568 i~vw~~~~~~~~~~~ 582 (583)
|..++..+|+.+..+
T Consensus 607 V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 607 IFSANRLTGSDVNLL 621 (699)
T ss_dssp EEEEETTTEEEEECC
T ss_pred EEEEEccCCCceEEe
Confidence 999998888776654
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.94 E-value=0.003 Score=58.39 Aligned_cols=102 Identities=13% Similarity=0.026 Sum_probs=61.9
Q ss_pred cceEEEeeCCCCCEEEEEecCCeEEEEEccCCce--eEEEe---ccCCCeEEEEEecC---CCCEEEEEcCC-----CcE
Q psy14906 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDES--LMEFI---QTWGPVTALSFRTD---GPPMMVSGSNT-----GHL 229 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~~l~s~~~d-----g~i 229 (583)
.....|+|.|+|+++++ ...|.|.+++ +++. +..+. ........|+|+|+ +..+.++-... +.|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 45679999999985554 5669999998 4432 22111 12356889999998 44244444332 568
Q ss_pred EEEeCCCCe-----e-hhhhh--hccccceEEEEEecCCCEEEEEe
Q psy14906 230 TVWNLEDRQ-----V-ENQIK--KAHRKVVTGAHFLYNEPLLVTSS 267 (583)
Q Consensus 230 ~vwd~~~~~-----~-~~~~~--~~~~~~v~~~~~~~~~~~l~s~~ 267 (583)
..|+...++ . +..+. .+.......++|.|||.+.++.+
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 888876431 1 11121 01112336899999998777654
|
| >2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.93 E-value=0.007 Score=55.88 Aligned_cols=61 Identities=11% Similarity=0.115 Sum_probs=39.9
Q ss_pred cCCeeeEEeccCCcEEEEEeCCceEEEEEccccce------EEeecccccceeeEEecCCCcEEEEEe
Q psy14906 502 DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI------IRKLSGHMGQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 502 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~h~~~v~~l~~s~d~~~l~s~~ 563 (583)
+.....++| .+|.++++....+.|...+++.... ...+-.-...+..+++.|||.++++..
T Consensus 267 ~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 267 GFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp CCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 345667777 5677777666677888888764431 122212235789999999998776654
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=97.90 E-value=0.014 Score=53.63 Aligned_cols=225 Identities=8% Similarity=0.083 Sum_probs=149.1
Q ss_pred EEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe-eCeEEEEEcCCeEEEEeccc--eeeeeecccC--
Q psy14906 37 RFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS-DFFHIYTSANNIIYAWRRGI--DIVGTYKGHT-- 111 (583)
Q Consensus 37 ~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~~~~~~i~vw~~~~--~~~~~~~~h~-- 111 (583)
-.+|.. .+|+.-.+..+.|+|+++.+.++...-. +.|.--.+ +.+.+.--.+..|+-|++.+ .+.+.+..|.
T Consensus 72 IMnP~~--~iiALrag~~lQiFnle~K~klks~~~~-e~VvfWkWis~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L 148 (494)
T 1bpo_A 72 IMNPAS--KVIALKAGKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSL 148 (494)
T ss_dssp EECSSS--SCEEEEETTEEEEEETTTTEEEEEEECS-SCCCEEEEEETTEEEEECSSEEEEEESSSSCCCEEEEECCGGG
T ss_pred eeCCCC--cEEEEecCCeEEEEchHHhhhhcceecC-CCceEEEecCCCeEEEEcCCeeEEecccCCCCchhheecchhc
Confidence 355554 3466667999999999999998776643 35555555 78888888899999999853 6777777653
Q ss_pred --ccEEEE--ccCCCEEEEEeC-------CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCC---CCEE
Q psy14906 112 --SPVHLI--LPFGPHLISVDE-------ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV---VDII 177 (583)
Q Consensus 112 --~~v~~i--s~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l 177 (583)
..|... +++.++++..|- .|.+.+|+.+.+. -+.++ +|......+.+..+ .+++
T Consensus 149 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ie-----------Ghaa~F~~~~~~g~~~~~~lf 216 (494)
T 1bpo_A 149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIE-----------GHAASFAQFKMEGNAEESTLF 216 (494)
T ss_dssp TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEEC-----------CSEEEEEEEECTTCSSEEEEE
T ss_pred ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchhe-----------eeeeeeEEEecCCCCCCceEE
Confidence 334443 889998885432 3678899887643 33444 66555544444322 1244
Q ss_pred EEEecC---CeEEEEEccCC--------ceeEEEe----ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhh
Q psy14906 178 GVGLSN---KKIILHNILTD--------ESLMEFI----QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242 (583)
Q Consensus 178 ~~~~~d---~~i~iw~~~~~--------~~~~~~~----~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 242 (583)
+.+... +.++|.++... +....+. ...+-..++..++.-. +++.-+.-|.+++||++++.++..
T Consensus 217 ~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 217 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYM 295 (494)
T ss_dssp EEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceEEEEecccceeeee
Confidence 444432 68899888532 1111111 1234566788888776 888899999999999999998876
Q ss_pred hhhccccceEEEEEecCCCEEEEEeCCCeEEEEEcc
Q psy14906 243 IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 243 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 278 (583)
- +-..+.|...+......-++.....|.|.--.++
T Consensus 296 n-rIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 296 N-RISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp E-ECCSSCEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred e-cccCCceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 6 4556667666665555566666677776666554
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.0017 Score=59.24 Aligned_cols=111 Identities=10% Similarity=0.091 Sum_probs=69.4
Q ss_pred CCceEEEEccCCcEEEEEe-----------------cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEE
Q psy14906 413 SKPTCVYITHCGNFVLIGY-----------------SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI 475 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~-----------------~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 475 (583)
.....+.+.++|++.++.. ..|.|+.+|. ++. ..+ ...-...+.++|+||++.|+
T Consensus 165 ~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~-~~~-----~~~l~~pNGia~spDg~~lY 236 (355)
T 3sre_A 165 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDV-RVV-----AEGFDFANGINISPDGKYVY 236 (355)
T ss_dssp SSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCC-EEE-----EEEESSEEEEEECTTSSEEE
T ss_pred CCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeE-EEe-----ecCCcccCcceECCCCCEEE
Confidence 4577888888888777653 1255666654 222 122 23345578999999998776
Q ss_pred Eee-cCCcEEEEEccCCC-CCceEEeeccCCeeeEEecc-CCcEEEEEeCC-ceEEEEEc
Q psy14906 476 SGG-NDQTVKVWHFKQTG-KPPLRSIKLDNGISFFRTHQ-ESSMLAVCLDD-FTVNIIDI 531 (583)
Q Consensus 476 s~~-~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~d-g~i~i~d~ 531 (583)
.+. ..+.|..|++.... ....+.+......-.+++.+ +|++.+++..+ +.|..|+.
T Consensus 237 vadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 237 IAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp EEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCT
T ss_pred EEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEEEECC
Confidence 554 56889999987431 11223444456677889998 59887766544 34444443
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=0.014 Score=53.84 Aligned_cols=104 Identities=11% Similarity=0.011 Sum_probs=62.1
Q ss_pred CcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc-eeEEEe---ccCCCeEEEEEecC---CCCEEEEEcC---C----C
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE-SLMEFI---QTWGPVTALSFRTD---GPPMMVSGSN---T----G 227 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~~l~s~~~---d----g 227 (583)
-.....|+|.|+|++++ +..+|.|++++ .+++ .+..+. ........|+|+|+ +..+.++-.. + .
T Consensus 28 l~~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 34568899999998555 45669999997 3454 222221 12256889999997 4424444332 3 5
Q ss_pred cEEEEeCCCC-------eeh-hhhhhccccceEEEEEecCCCEEEEEe
Q psy14906 228 HLTVWNLEDR-------QVE-NQIKKAHRKVVTGAHFLYNEPLLVTSS 267 (583)
Q Consensus 228 ~i~vwd~~~~-------~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~ 267 (583)
.|..|+.... +.+ ..+..........++|.|||.++++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 6777877643 111 112111112346799999998777754
|
| >3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=0.027 Score=51.97 Aligned_cols=62 Identities=18% Similarity=0.193 Sum_probs=42.3
Q ss_pred cCCeeeEEec-------cCCcEEEEEeCCceEEEEEcccc-ceE--Ee-ecccccceeeEEecCCCcEEEEEe
Q psy14906 502 DNGISFFRTH-------QESSMLAVCLDDFTVNIIDIDTC-TII--RK-LSGHMGQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 502 ~~~v~~~~~s-------~~~~~l~~~~~dg~i~i~d~~~~-~~~--~~-~~~h~~~v~~l~~s~d~~~l~s~~ 563 (583)
+.....++|. .+|.++++....+.|...+++.. +.. .. +.+....+..+++.|||.+.++..
T Consensus 258 ~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 258 TWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 3457777773 56777777777788999888753 322 22 223345789999999998776654
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.0051 Score=55.53 Aligned_cols=146 Identities=10% Similarity=0.028 Sum_probs=70.4
Q ss_pred CCCEEEEEe-cC-----CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCC-----CcEEEEeCCCCe---
Q psy14906 173 VVDIIGVGL-SN-----KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT-----GHLTVWNLEDRQ--- 238 (583)
Q Consensus 173 ~~~~l~~~~-~d-----~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~--- 238 (583)
++.+++.|+ .+ ..+.+||+.+.+-...-..............++. +++.|+.+ ..+.+||..+++
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~-l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDR-IYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTE-EEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEECCE-EEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 455666666 32 3688999877643221111111111112223555 77777754 468999988765
Q ss_pred e--hhhhhhccccceEEEEEecCCCEEEEEeCCC-----eEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEE
Q psy14906 239 V--ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN-----TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL 311 (583)
Q Consensus 239 ~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 311 (583)
- +..+.. .......+. .++++++.|+.++ .+.+| +..+.....+..+...... .+++.. +++.++
T Consensus 93 W~~~~~~p~-~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~--d~~~~~W~~~~~~p~~r~~-~~~~~~--~~~iyv 164 (301)
T 2vpj_A 93 WYSVAPMNV-RRGLAGATT--LGDMIYVSGGFDGSRRHTSMERY--DPNIDQWSMLGDMQTAREG-AGLVVA--SGVIYC 164 (301)
T ss_dssp CEEECCCSS-CCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEE--ETTTTEEEEEEECSSCCBS-CEEEEE--TTEEEE
T ss_pred eEECCCCCC-CccceeEEE--ECCEEEEEcccCCCcccceEEEE--cCCCCeEEECCCCCCCccc-ceEEEE--CCEEEE
Confidence 2 222211 111111222 2677777776543 45566 4444344444443322111 222222 566666
Q ss_pred EeeCC-----CcEEEEEcccc
Q psy14906 312 SAAGD-----STLRIFNTKSE 327 (583)
Q Consensus 312 ~~~~d-----g~i~iwd~~~~ 327 (583)
.|+.+ ..+.+||+.+.
T Consensus 165 ~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 165 LGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp ECCBCSSCBCCCEEEEETTTT
T ss_pred ECCCCCCcccceEEEEeCCCC
Confidence 66654 23555555443
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0036 Score=56.72 Aligned_cols=147 Identities=12% Similarity=0.015 Sum_probs=78.1
Q ss_pred CCcEEEEEecC------ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec---------CCcEEEEE
Q psy14906 423 CGNFVLIGYSS------GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN---------DQTVKVWH 487 (583)
Q Consensus 423 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---------dg~i~iwd 487 (583)
+++.++.|+.+ ..+.+||..+.+-...-.. ......-..+. -++++++.|+. -..+.+||
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd 175 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSM---LTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYD 175 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCC---SSCCBSCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEE
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCC---cCCcceeEEEE--ECCEEEEECCCCCCCCcccccceEEEeC
Confidence 56666776654 4588899887654332211 11111112222 26677777764 34588888
Q ss_pred ccCCCCCceEEeeccC-CeeeEEeccCCcEEEEEeCC-----ceEEEEEccccceE--EeecccccceeeEEecCCCcEE
Q psy14906 488 FKQTGKPPLRSIKLDN-GISFFRTHQESSMLAVCLDD-----FTVNIIDIDTCTII--RKLSGHMGQLTDADFSPDSRWL 559 (583)
Q Consensus 488 ~~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~--~~~~~h~~~v~~l~~s~d~~~l 559 (583)
+.+. +-...-.... .....+..-++++++.|+.+ ..+.+||..+.+-. ..+.........+.+ +++++
T Consensus 176 ~~~~--~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~ 251 (306)
T 3ii7_A 176 PATE--TWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVY 251 (306)
T ss_dssp TTTT--EEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEE
T ss_pred CCCC--eEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEE
Confidence 8775 2222211111 11111222267777777653 46889998876432 222221222222233 67788
Q ss_pred EEEeCC-----CeEEEEeCCCccc
Q psy14906 560 ITASMD-----CTIRVWDIPSSQL 578 (583)
Q Consensus 560 ~s~~~d-----~~i~vw~~~~~~~ 578 (583)
+.|+.+ ..+.+||+.+.+.
T Consensus 252 v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 252 VLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp EEECBCSSSBCCEEEEEETTTTEE
T ss_pred EEeCcCCCeeeeeEEEEcCCCCeE
Confidence 888754 5688999887654
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0036 Score=51.68 Aligned_cols=142 Identities=10% Similarity=0.032 Sum_probs=85.9
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccC--------eeEEEEeCCCcEEEEeecCCcEE
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG--------VRGVVSDNLNQIVISGGNDQTVK 484 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~--------v~~~~~s~~~~~l~s~~~dg~i~ 484 (583)
..+..++|+|+|.+.++ .+|.++-.+..+.....-+ +.... -.++.|.|+|.+.++ .||.|+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~------~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iy 110 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWM------GRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLY 110 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHH------HHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEE
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCccccc------ccccEecccccccceEEEECCCCCEEEe--CCCEEE
Confidence 46789999999997777 7787777776543221111 11222 378999999987777 569888
Q ss_pred EEEccCCCCCc-e---EEeec--cCCeeeEEeccCCcEEEEEeCCceEEEEEccccce------EEeec-ccccceeeEE
Q psy14906 485 VWHFKQTGKPP-L---RSIKL--DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI------IRKLS-GHMGQLTDAD 551 (583)
Q Consensus 485 iwd~~~~~~~~-~---~~~~~--~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~-~h~~~v~~l~ 551 (583)
-++..+..... + ..+.. -..+..+.+.|+|.+.|+. |+.++-....++.. ...+- ..-..-+.+.
T Consensus 111 r~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~ 188 (236)
T 1tl2_A 111 KASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLF 188 (236)
T ss_dssp EESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEE
T ss_pred EeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEE
Confidence 77764431111 1 11111 1468999999999988887 77654433321110 01111 2223345577
Q ss_pred ecCCCcEEEEEeCCCeE
Q psy14906 552 FSPDSRWLITASMDCTI 568 (583)
Q Consensus 552 ~s~d~~~l~s~~~d~~i 568 (583)
|++++.+.+.. ++.+
T Consensus 189 f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 189 FSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp ECTTSCEEEEE--TTEE
T ss_pred ECCCCcEEEEe--CCeE
Confidence 99999877765 6733
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.036 Score=49.60 Aligned_cols=210 Identities=9% Similarity=0.004 Sum_probs=117.4
Q ss_pred EeeCeEEEEE---cCCeEEEEeccceeeeeecccCccEEEEccCCCEEEEEeCC--------------CcEEEEEcCCCc
Q psy14906 80 SSDFFHIYTS---ANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEE--------------SNVKVWDIKAEE 142 (583)
Q Consensus 80 ~~~~~~~~~~---~~~~i~vw~~~~~~~~~~~~h~~~v~~is~~~~~l~s~~~d--------------g~i~iwd~~~~~ 142 (583)
++++..|.-+ .++.|...+.++...+.+... .+..|+++|++|+-+... ..|+..+++.++
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~--~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~ 99 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND--TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG 99 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE--EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCC
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCCCEEccCC--ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc
Confidence 3455444443 256777777766545555432 345679999998876543 357777777665
Q ss_pred EEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe----cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCC
Q psy14906 143 TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL----SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPP 218 (583)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 218 (583)
...... .. +..|+++++.|+... .+..|...++. +.....+..+.. .+|+++++.
T Consensus 100 ~~~l~~--------------~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~lt~~~~----~~~~~~g~~ 158 (302)
T 3s25_A 100 STVLDP--------------DP--CIYASLIGNYIYYLHYDTQTATSLYRIRID-GEEKKKIKNHYL----FTCNTSDRY 158 (302)
T ss_dssp CEEEEC--------------SC--EEEEEEETTEEEEEEESSSSCEEEEEEETT-SCCCEEEESSCC----CCSEEETTE
T ss_pred ceEeec--------------CC--ccEEEEeCCEEEEEeecCCCCceEEEEECC-CCCeEEEeCCCc----eEeeEECCE
Confidence 332221 11 236778999998776 23456666665 444455554422 457888885
Q ss_pred EEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCe
Q psy14906 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPN 298 (583)
Q Consensus 219 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~ 298 (583)
+..+......|.+-++..+.....+ . +... ..+.|++.+|+-......-+|+.++...... ..+.. ..+
T Consensus 159 iy~t~~g~~~Iy~~~l~g~~~~~l~-~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~---~~Lt~--~~~- 227 (302)
T 3s25_A 159 FYYNNPKNGQLYRYDTASQSEALFY-D---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP---VVLTE--ANI- 227 (302)
T ss_dssp EEEECTTTCCEEEEETTTTEEEEEE-C---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC---EECSC--SCE-
T ss_pred EEEEeCCCceEEEEECCCCCEEEEe-C---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe---EEEeC--CCc-
Confidence 5555554678888888766543323 2 2222 3456888888876544324566555433222 22321 222
Q ss_pred eEEEeeCCCCEEEEeeC--CCcEEEEEcc
Q psy14906 299 YIQFYGNSSDNILSAAG--DSTLRIFNTK 325 (583)
Q Consensus 299 ~~~~~~~~~~~l~~~~~--dg~i~iwd~~ 325 (583)
..+.| ++++|+.+.. .+.|..-++.
T Consensus 228 -~~~~~-~g~~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 228 -EHYNV-YGSLIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp -EEEEE-ETTEEEEEECSSSCEEEEEETT
T ss_pred -ceEEE-CCCEEEEEECCCCcEEEEEECC
Confidence 33666 5667765532 2344444443
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.048 Score=50.28 Aligned_cols=70 Identities=11% Similarity=0.200 Sum_probs=45.8
Q ss_pred cCCeeeEEecc-------CCcEEEEEeCCceEEEEEccccceEEe---ecccccceeeEEecCCCcEEEEEe-CCCeEEE
Q psy14906 502 DNGISFFRTHQ-------ESSMLAVCLDDFTVNIIDIDTCTIIRK---LSGHMGQLTDADFSPDSRWLITAS-MDCTIRV 570 (583)
Q Consensus 502 ~~~v~~~~~s~-------~~~~l~~~~~dg~i~i~d~~~~~~~~~---~~~h~~~v~~l~~s~d~~~l~s~~-~d~~i~v 570 (583)
+..+..++|.. +|.++++....+.|...+++.++.... +......+..+++.|||.+.++.. .+| +|
T Consensus 270 ~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g--~I 347 (353)
T 2g8s_A 270 SPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSG--EL 347 (353)
T ss_dssp CCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTE--EE
T ss_pred CcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCC--EE
Confidence 34566777753 577777777788888888886654322 222335789999999998766543 345 44
Q ss_pred EeC
Q psy14906 571 WDI 573 (583)
Q Consensus 571 w~~ 573 (583)
|.+
T Consensus 348 ~ri 350 (353)
T 2g8s_A 348 LKV 350 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
|
| >3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.022 Score=52.04 Aligned_cols=180 Identities=9% Similarity=0.028 Sum_probs=102.6
Q ss_pred CCceEEEeecCcccccceeeecccc-cccCCCCceEEEEcc--CCc--EEEEEec--CceEEEEEcccCccccccCCCCC
Q psy14906 383 GKNKVSLWSFYKSKMDDMFLVPERC-KQAKQSKPTCVYITH--CGN--FVLIGYS--SGHVDRFNIQSGAHRGSYGHDNQ 455 (583)
Q Consensus 383 ~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~s~--~~~--~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~ 455 (583)
.++.|.++|..........+..... ..........+.+.+ +++ ++++-.. +..|.+|++..+.....+.....
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 6888999998743222222222211 111224667777766 353 4444333 56788888765432211110000
Q ss_pred CCcccCeeEEEEeCCCcEEEEeec---C------------CcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEE
Q psy14906 456 PGHVGGVRGVVSDNLNQIVISGGN---D------------QTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVC 520 (583)
Q Consensus 456 ~~h~~~v~~~~~s~~~~~l~s~~~---d------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 520 (583)
...-...+.+.+.++|.+.++... | ..=++|.+..+ +.......-...+.++|+||++.|+++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYva 238 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIA 238 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEE
Confidence 122346889999999998877541 1 22344444433 443344444678899999999977776
Q ss_pred e-CCceEEEEEccc-cce--EEeecccccceeeEEecC-CCcEEEEEeCC
Q psy14906 521 L-DDFTVNIIDIDT-CTI--IRKLSGHMGQLTDADFSP-DSRWLITASMD 565 (583)
Q Consensus 521 ~-~dg~i~i~d~~~-~~~--~~~~~~h~~~v~~l~~s~-d~~~l~s~~~d 565 (583)
. ..+.|+.|+++. ++. ...+. .....-.+++.+ +|++.+++..+
T Consensus 239 dt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 239 ELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESC
T ss_pred eCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecCC
Confidence 5 468999999863 332 12332 235567788888 58877766544
|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.025 Score=51.05 Aligned_cols=223 Identities=9% Similarity=-0.018 Sum_probs=113.6
Q ss_pred CCeEEEEecCCcEEE--eecCCCCCCeEEEEeeCeEE-EEEcC----CeEEEEeccceeeeee---cccCccEEEEccCC
Q psy14906 52 GKAFHVYGCNHFKLL--SVSPQHEDDITCLSSDFFHI-YTSAN----NIIYAWRRGIDIVGTY---KGHTSPVHLILPFG 121 (583)
Q Consensus 52 ~~~i~v~d~~~~~~~--~~~~~h~~~v~~~~~~~~~~-~~~~~----~~i~vw~~~~~~~~~~---~~h~~~v~~is~~~ 121 (583)
.+.+.+||..+.+=. ..++.....-.++..+++++ .++.+ ..+.++|........+ ......-.....++
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~ 102 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEG 102 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETT
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEECC
Confidence 568999999885533 33333333334445667654 44433 5788899754332222 21111122224467
Q ss_pred CEEEEEeCC------CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec---------CCeE
Q psy14906 122 PHLISVDEE------SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS---------NKKI 186 (583)
Q Consensus 122 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---------d~~i 186 (583)
+.++.|+.+ ..+.+||..+.+-...-... .....-.++.+ ++++++.|+. ...+
T Consensus 103 ~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p---------~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 171 (306)
T 3ii7_A 103 KIYTSGGSEVGNSALYLFECYDTRTESWHTKPSML---------TQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSC 171 (306)
T ss_dssp EEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCS---------SCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCE
T ss_pred EEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCc---------CCcceeEEEEE--CCEEEEECCCCCCCCcccccceE
Confidence 777777655 46889998887543322211 11111122222 5667777654 3458
Q ss_pred EEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCC-----CcEEEEeCCCCeeh--hhhhhccccceEEEEEecC
Q psy14906 187 ILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT-----GHLTVWNLEDRQVE--NQIKKAHRKVVTGAHFLYN 259 (583)
Q Consensus 187 ~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~ 259 (583)
.+||+.+.+-...-..........+..-+++ +++.|+.+ ..+.+||+.+.+-. ..+. .......++.+ +
T Consensus 172 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~-i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~~--~ 247 (306)
T 3ii7_A 172 EVYDPATETWTELCPMIEARKNHGLVFVKDK-IFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMP-WKGVTVKCAAV--G 247 (306)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEEETTE-EEEECCEETTEEBCCEEEEETTTTEEEECCCCS-CCBSCCEEEEE--T
T ss_pred EEeCCCCCeEEECCCccchhhcceEEEECCE-EEEEeCCCCCCCCceEEEeeCCCCcEEECCCCC-CCccceeEEEE--C
Confidence 8999887643322111111111111222555 77777653 35889999876432 2221 11112222222 6
Q ss_pred CCEEEEEeCC-----CeEEEEEccCCCCCceeeEEec
Q psy14906 260 EPLLVTSSPD-----NTLKLWIFDKADGNGRLLRIRE 291 (583)
Q Consensus 260 ~~~l~s~~~d-----~~i~~w~~~~~~~~~~~~~~~~ 291 (583)
+.+++.|+.+ ..+.+| +........+..+.
T Consensus 248 ~~i~v~GG~~~~~~~~~~~~y--d~~~~~W~~~~~~~ 282 (306)
T 3ii7_A 248 SIVYVLAGFQGVGRLGHILEY--NTETDKWVANSKVR 282 (306)
T ss_dssp TEEEEEECBCSSSBCCEEEEE--ETTTTEEEEEEEEE
T ss_pred CEEEEEeCcCCCeeeeeEEEE--cCCCCeEEeCCCcc
Confidence 7778888754 455666 44443455554443
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.011 Score=53.30 Aligned_cols=147 Identities=14% Similarity=0.068 Sum_probs=77.2
Q ss_pred CCcEEEEEecC-----ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecC-------CcEEEEEccC
Q psy14906 423 CGNFVLIGYSS-----GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGND-------QTVKVWHFKQ 490 (583)
Q Consensus 423 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-------g~i~iwd~~~ 490 (583)
+++.++.|+.+ ..+.+||..+.+-...-.. .........+. -++++++.|+.+ ..+.+||+.+
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPM---NTRRSSVGVGV--VGGLLYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCC---SSCCBSCEEEE--ETTEEEEECCEETTTTEECCCEEEEETTT
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCC---CCcccCceEEE--ECCEEEEEeCCCCCCCccccEEEEEeCCC
Confidence 55666666644 3578888876654332211 11111112222 267777777643 3488888876
Q ss_pred CCCCceEEeeccCC-eeeEEeccCCcEEEEEeCC-----ceEEEEEccccceEE--eecccccceeeEEecCCCcEEEEE
Q psy14906 491 TGKPPLRSIKLDNG-ISFFRTHQESSMLAVCLDD-----FTVNIIDIDTCTIIR--KLSGHMGQLTDADFSPDSRWLITA 562 (583)
Q Consensus 491 ~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~h~~~v~~l~~s~d~~~l~s~ 562 (583)
. +-...-....+ ....+..-++++++.|+.+ ..+.+||..+.+-.. .+..... ..-....++++++.|
T Consensus 183 ~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~--~~~~~~~~~~i~v~G 258 (302)
T 2xn4_A 183 N--EWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRR--NAGVCAVNGLLYVVG 258 (302)
T ss_dssp T--EEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCB--SCEEEEETTEEEEEC
T ss_pred C--cEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccc--cCeEEEECCEEEEEC
Confidence 5 22221111111 1111222367788887764 478999998764322 2221111 111222367788888
Q ss_pred eCCC-----eEEEEeCCCccc
Q psy14906 563 SMDC-----TIRVWDIPSSQL 578 (583)
Q Consensus 563 ~~d~-----~i~vw~~~~~~~ 578 (583)
+.++ .+.+||+.+.+.
T Consensus 259 G~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 259 GDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp CBCSSSBCCCEEEEETTTTEE
T ss_pred CcCCCcccccEEEEcCCCCeE
Confidence 7653 489999887654
|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.046 Score=49.13 Aligned_cols=202 Identities=8% Similarity=-0.055 Sum_probs=102.0
Q ss_pred CeEEEEecCCcEEEe--ecCCCCCCeEEEEeeCeEE-EEEcC-----CeEEEEecccee---eeee---cccCccEEEEc
Q psy14906 53 KAFHVYGCNHFKLLS--VSPQHEDDITCLSSDFFHI-YTSAN-----NIIYAWRRGIDI---VGTY---KGHTSPVHLIL 118 (583)
Q Consensus 53 ~~i~v~d~~~~~~~~--~~~~h~~~v~~~~~~~~~~-~~~~~-----~~i~vw~~~~~~---~~~~---~~h~~~v~~is 118 (583)
+.+.+||+.+.+-.. .++.....-.++..+++++ .++.+ +.+.+||..... ...+ ......-.++.
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~ 110 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT 110 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE
Confidence 478999988765433 2332222333444566544 44433 368889864332 2222 22112222234
Q ss_pred cCCCEEEEEeCC-----CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC-----CeEEE
Q psy14906 119 PFGPHLISVDEE-----SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN-----KKIIL 188 (583)
Q Consensus 119 ~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----~~i~i 188 (583)
.+++.++.|+.+ ..+.++|..+.+-...-... .....-.++.+ ++++++.|+.+ ..+.+
T Consensus 111 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p---------~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~ 179 (301)
T 2vpj_A 111 LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQ---------TAREGAGLVVA--SGVIYCLGGYDGLNILNSVEK 179 (301)
T ss_dssp ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECS---------SCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEE
T ss_pred ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCC---------CCcccceEEEE--CCEEEEECCCCCCcccceEEE
Confidence 466666676643 36888998876543322211 11111122222 67777777654 46889
Q ss_pred EEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCC-----CcEEEEeCCCCeehh--hhhhccccceEEEEEecCCC
Q psy14906 189 HNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT-----GHLTVWNLEDRQVEN--QIKKAHRKVVTGAHFLYNEP 261 (583)
Q Consensus 189 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~ 261 (583)
||+.+.+-...-..........+..-++. +++.|+.+ ..+.+||+.+.+-.. .+... ......+ .-+++
T Consensus 180 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~~~~--~~~~~ 255 (301)
T 2vpj_A 180 YDPHTGHWTNVTPMATKRSGAGVALLNDH-IYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP-RCYVGAT--VLRGR 255 (301)
T ss_dssp EETTTTEEEEECCCSSCCBSCEEEEETTE-EEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC-CBSCEEE--EETTE
T ss_pred EeCCCCcEEeCCCCCcccccceEEEECCE-EEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc-ccceeEE--EECCE
Confidence 99877644332111111111111222555 77777764 468999998775322 22111 1111222 23677
Q ss_pred EEEEEeCC
Q psy14906 262 LLVTSSPD 269 (583)
Q Consensus 262 ~l~s~~~d 269 (583)
+++.|+.+
T Consensus 256 i~v~GG~~ 263 (301)
T 2vpj_A 256 LYAIAGYD 263 (301)
T ss_dssp EEEECCBC
T ss_pred EEEEcCcC
Confidence 77777765
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=97.45 E-value=0.023 Score=60.71 Aligned_cols=267 Identities=15% Similarity=0.178 Sum_probs=156.2
Q ss_pred CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEE
Q psy14906 130 ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTA 209 (583)
Q Consensus 130 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~ 209 (583)
+.+|.|-|+.++..+.+.+. .--+.-.+|..+.||.-. ..++.|+|+++.+.++.+... .+|.-
T Consensus 47 ~~~vvIidl~~~~~~~rrpi--------------~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~-e~Vvf 110 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPI--------------SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTF 110 (1630)
T ss_pred CceEEEEECCCCCCcccccc--------------cchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccC-CCceE
Confidence 44788888888665533322 122344678888777664 678999999999888888776 56777
Q ss_pred EEEecCCCCEEEEEcCCCcEEEEeCCCC-eehhhhhhcc----ccceEEEEEecCCCEEEEEe-------CCCeEEEEEc
Q psy14906 210 LSFRTDGPPMMVSGSNTGHLTVWNLEDR-QVENQIKKAH----RKVVTGAHFLYNEPLLVTSS-------PDNTLKLWIF 277 (583)
Q Consensus 210 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~-------~d~~i~~w~~ 277 (583)
=.|-.+.. |+-.+ +..|..|++... .+.+.+ .-| ...|..-..+++.++++..| -.|.+.+|..
T Consensus 111 WkWis~~~--l~lVT-~~aVyHW~~~~~s~P~k~f-dR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~ 186 (1630)
T 1xi4_A 111 WKWISLNT--VALVT-DNAVYHWSMEGESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV 186 (1630)
T ss_pred EEecCCCe--eEEEc-CCeEEEeccCCCCccHHHH-hcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeec
Confidence 77876665 33333 347999999743 455544 344 45677777888888877544 3488899966
Q ss_pred cCCCCCceeeEEeccCCCCCeeEEEee--CCCCEEEEeeC---CCcEEEEEcccc-ccceeeccchhhhhhhhhhcchhc
Q psy14906 278 DKADGNGRLLRIREGHSAPPNYIQFYG--NSSDNILSAAG---DSTLRIFNTKSE-TSNKNLGIASANRNNLKRKNRLEK 351 (583)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~---dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 351 (583)
+ .+..+.+.||.+....+.... .....+..+.. .+.+++-++... .....+...
T Consensus 187 e-----r~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk--------------- 246 (1630)
T 1xi4_A 187 D-----RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKK--------------- 246 (1630)
T ss_pred c-----cccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccc---------------
Confidence 3 344556677766554444321 11122222221 256777666432 000000000
Q ss_pred cccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe
Q psy14906 352 MNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY 431 (583)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 431 (583)
.....+| ++ ....-..++..++.-..+..-+
T Consensus 247 -~~~~~~~--------------------------------------------~~----~~~Dfpv~~~vs~k~g~iy~it 277 (1630)
T 1xi4_A 247 -AVDVFFP--------------------------------------------PE----AQNDFPVAMQISEKHDVVFLIT 277 (1630)
T ss_pred -cccccCC--------------------------------------------cc----cccCcceEEEeccccCEEEEEe
Confidence 0000000 00 0013456788888888888999
Q ss_pred cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccC
Q psy14906 432 SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQ 490 (583)
Q Consensus 432 ~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 490 (583)
.-|.|++||+.++.++..- +-....|...+......-++.....|.|.--.+..
T Consensus 278 k~G~~~~~d~~t~~~i~~~-----ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 278 KYGYIHLYDLETGTCIYMN-----RISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred cCceEEEEecccchhhhhc-----cccCCceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence 9999999999999987665 33344444444433333344444555554444443
|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.02 Score=51.53 Aligned_cols=64 Identities=13% Similarity=0.134 Sum_probs=35.9
Q ss_pred CCcEEEEEecC-----ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCC-----cEEEEEccCC
Q psy14906 423 CGNFVLIGYSS-----GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ-----TVKVWHFKQT 491 (583)
Q Consensus 423 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~ 491 (583)
+++.++.|+.+ ..+.+||..+.+-...-..+ ........+. -++++++.|+.++ .+.+||+.+.
T Consensus 204 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~---~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 204 NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMN---MCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCS---SCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCC---CccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCC
Confidence 56677777654 36889998776543322111 1111111222 2677888887654 4788887765
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.022 Score=52.47 Aligned_cols=114 Identities=11% Similarity=0.168 Sum_probs=78.7
Q ss_pred CceEEEEccCCcEEEEEecCceEEEEEcccCcccc------------ccCCCC-CCCcccCeeEEEEeCCC---cEEEEe
Q psy14906 414 KPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRG------------SYGHDN-QPGHVGGVRGVVSDNLN---QIVISG 477 (583)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~------------~~~~~~-~~~h~~~v~~~~~s~~~---~~l~s~ 477 (583)
.+..+..+|+|++||+.+.. .|.|..+..+.... .+.... ......+|..+.|+|-+ ..|++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 57789999999999998655 58888887332111 111000 01135789999999954 589999
Q ss_pred ecCCcEEEEEccCCCCCceEEeec----------cCCeeeEEeccCCcEEEEEe--CCceEEEE
Q psy14906 478 GNDQTVKVWHFKQTGKPPLRSIKL----------DNGISFFRTHQESSMLAVCL--DDFTVNII 529 (583)
Q Consensus 478 ~~dg~i~iwd~~~~~~~~~~~~~~----------~~~v~~~~~s~~~~~l~~~~--~dg~i~i~ 529 (583)
..|+.|++||+.....++. .++. ...+.+++|.+++-.|.+.+ +.|.|+-.
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 9999999999987433444 2221 14688999999888777755 77887654
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=97.30 E-value=0.13 Score=49.11 Aligned_cols=104 Identities=15% Similarity=0.135 Sum_probs=70.8
Q ss_pred cCeeEEEEeCCCcEEEEee-cCCcEEEEEccCCC----CCc-------eEEeeccCCeeeEEeccCCcEEEEEeCCceEE
Q psy14906 460 GGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQTG----KPP-------LRSIKLDNGISFFRTHQESSMLAVCLDDFTVN 527 (583)
Q Consensus 460 ~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~----~~~-------~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 527 (583)
.....+..+|||++++.++ .+.++.++|++... .+. ....+..-.....+|.++|....+-.-|..|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEE
Confidence 4455788999999887665 67899999998420 011 23344455788899999996666677899999
Q ss_pred EEEcccc----------ceEEeecccccceeeE-----EecCCCcEEEEEe
Q psy14906 528 IIDIDTC----------TIIRKLSGHMGQLTDA-----DFSPDSRWLITAS 563 (583)
Q Consensus 528 i~d~~~~----------~~~~~~~~h~~~v~~l-----~~s~d~~~l~s~~ 563 (583)
.|++... ..+.++.-|-.+-.-. .-.+||++|++..
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 9999764 3555565554322211 1257889988874
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=97.28 E-value=0.023 Score=51.31 Aligned_cols=148 Identities=14% Similarity=0.084 Sum_probs=77.4
Q ss_pred CCcEEEEEecC-----ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecC-----CcEEEEEccCCC
Q psy14906 423 CGNFVLIGYSS-----GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGND-----QTVKVWHFKQTG 492 (583)
Q Consensus 423 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~ 492 (583)
+++.++.|+.+ ..+.+||..+.+-...-.. ......-..+.+ ++++++.|+.+ ..+.+||+.+..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 195 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPM---LTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNE 195 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCC---SSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCC---CccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCe
Confidence 55666666543 3588888876654332211 111111122222 67777777754 358888887652
Q ss_pred CCceEEeeccCCeeeEEeccCCcEEEEEeCC-----ceEEEEEccccceEE--eecccccceeeEEecCCCcEEEEEeCC
Q psy14906 493 KPPLRSIKLDNGISFFRTHQESSMLAVCLDD-----FTVNIIDIDTCTIIR--KLSGHMGQLTDADFSPDSRWLITASMD 565 (583)
Q Consensus 493 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~h~~~v~~l~~s~d~~~l~s~~~d 565 (583)
-..+..+.....-.+++. -++++++.|+.+ ..+.+||+.+.+-.. .+......-..+. -++++++.|+.+
T Consensus 196 W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~ 272 (308)
T 1zgk_A 196 WRMITAMNTIRSGAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV--HQGRIYVLGGYD 272 (308)
T ss_dssp EEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBC
T ss_pred EeeCCCCCCccccceEEE-ECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE--ECCEEEEEcCcC
Confidence 111111111111112222 267777777664 568999998764332 1221111112222 367777887754
Q ss_pred -----CeEEEEeCCCccc
Q psy14906 566 -----CTIRVWDIPSSQL 578 (583)
Q Consensus 566 -----~~i~vw~~~~~~~ 578 (583)
..+.+||+.+.+.
T Consensus 273 ~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 273 GHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp SSCBCCEEEEEETTTTEE
T ss_pred CCcccceEEEEcCCCCEE
Confidence 4688999887654
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.043 Score=49.76 Aligned_cols=107 Identities=8% Similarity=-0.013 Sum_probs=55.6
Q ss_pred cCCcEEEEEec------CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCC-----cEEEEEccC
Q psy14906 422 HCGNFVLIGYS------SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ-----TVKVWHFKQ 490 (583)
Q Consensus 422 ~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~ 490 (583)
-+++.++.|+. -..+.+||..+.+-...-.. ......-.++.+ ++++++.|+.++ .+.+||+.+
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPM---QTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCC---SSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCC---CCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCC
Confidence 35566666665 24688899877653332211 111111122222 677888887654 477888876
Q ss_pred CCCCceEEeeccC-CeeeEEeccCCcEEEEEeCC--------------ceEEEEEccccc
Q psy14906 491 TGKPPLRSIKLDN-GISFFRTHQESSMLAVCLDD--------------FTVNIIDIDTCT 535 (583)
Q Consensus 491 ~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~d--------------g~i~i~d~~~~~ 535 (583)
. +-...-.... .....+..-++++++.|+.+ ..+.+||+++.+
T Consensus 222 ~--~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 222 N--KWAPFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp T--EEEEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred C--eEEECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 5 2222211111 11111222367777777653 247788887654
|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.074 Score=48.16 Aligned_cols=147 Identities=11% Similarity=0.055 Sum_probs=76.1
Q ss_pred CCcEEEEEecC--------ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec-C-----CcEEEEEc
Q psy14906 423 CGNFVLIGYSS--------GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN-D-----QTVKVWHF 488 (583)
Q Consensus 423 ~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-d-----g~i~iwd~ 488 (583)
+++.++.|+.+ ..+.+||..+.+-...-.. ......-..+. -++++++.|+. + ..+.+||+
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~ 172 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPL---PYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDP 172 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCC---SSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEET
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCC---CCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeC
Confidence 45566666532 4588899877653322111 11111111222 36677777776 2 35888888
Q ss_pred cCCCCCceEEeeccC-CeeeEEeccCCcEEEEEeCCc-----eEEEEEccccceEE--eecccccceeeEEecCCCcEEE
Q psy14906 489 KQTGKPPLRSIKLDN-GISFFRTHQESSMLAVCLDDF-----TVNIIDIDTCTIIR--KLSGHMGQLTDADFSPDSRWLI 560 (583)
Q Consensus 489 ~~~~~~~~~~~~~~~-~v~~~~~s~~~~~l~~~~~dg-----~i~i~d~~~~~~~~--~~~~h~~~v~~l~~s~d~~~l~ 560 (583)
.+. +-...-..+. .....+..-++++++.|+.++ .+.+||..+.+-.. .+......-..+. -++++++
T Consensus 173 ~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v 248 (315)
T 4asc_A 173 KKF--EWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVS--LVGTLYA 248 (315)
T ss_dssp TTT--EEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEE
T ss_pred CCC--eEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEE--ECCEEEE
Confidence 765 2211111111 111122223678888877653 68899988764322 2221111112222 3677777
Q ss_pred EEeCC--------------CeEEEEeCCCccc
Q psy14906 561 TASMD--------------CTIRVWDIPSSQL 578 (583)
Q Consensus 561 s~~~d--------------~~i~vw~~~~~~~ 578 (583)
.|+.+ ..+.+||+.+.+.
T Consensus 249 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 249 IGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred ECCccccCcCCccccccccCcEEEecCCCChh
Confidence 77764 2477889887654
|
| >2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.16 Score=46.80 Aligned_cols=65 Identities=15% Similarity=0.104 Sum_probs=41.8
Q ss_pred cCeeEEEEeC-------CCcEEEEeecCCcEEEEEccCCCCCceEEee----ccCCeeeEEeccCCcEEEEEe-CCceE
Q psy14906 460 GGVRGVVSDN-------LNQIVISGGNDQTVKVWHFKQTGKPPLRSIK----LDNGISFFRTHQESSMLAVCL-DDFTV 526 (583)
Q Consensus 460 ~~v~~~~~s~-------~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~-~dg~i 526 (583)
.....++|.. +++++++.-..+.|...+++.+ ....... ....+..+++.|||.++++.. .+|.|
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGD--KVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGEL 347 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETT--EEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCC--eEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEE
Confidence 4577788864 4677777667788888888754 3332211 124788999999998666543 34433
|
| >3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.15 Score=45.64 Aligned_cols=138 Identities=10% Similarity=0.033 Sum_probs=75.9
Q ss_pred CCCCCEEEEEe--cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCC-------------CcEEEEeCC
Q psy14906 171 SPVVDIIGVGL--SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT-------------GHLTVWNLE 235 (583)
Q Consensus 171 s~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-------------g~i~vwd~~ 235 (583)
++++..|.... .++.|...+.. |.....+... .+--+++++.++..+...+ ..|+..++.
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNID-GSNIHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETT-SCSCEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EEeCCEEEEEeCCCCceEEEEcCC-CCCCEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 34677776654 24566666654 4344444433 2345688898555555443 357777777
Q ss_pred CCeehhhhhhccccceEEEEEecCCCEEEEEe--CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEe
Q psy14906 236 DRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS--PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSA 313 (583)
Q Consensus 236 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 313 (583)
..+.. .+ .... +..|+++++.|+-.. .++.-.|+.++...... ..+..+.. ..+++ +++.|+-.
T Consensus 97 g~~~~-~l---~~~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~---~~lt~~~~----~~~~~-~g~~iy~t 162 (302)
T 3s25_A 97 GHGST-VL---DPDP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEK---KKIKNHYL----FTCNT-SDRYFYYN 162 (302)
T ss_dssp SCCCE-EE---ECSC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCC---EEEESSCC----CCSEE-ETTEEEEE
T ss_pred CCcce-Ee---ecCC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCe---EEEeCCCc----eEeeE-ECCEEEEE
Confidence 65422 22 1111 236788999888776 45666777666543222 23333322 23455 56666655
Q ss_pred eC-CCcEEEEEcccc
Q psy14906 314 AG-DSTLRIFNTKSE 327 (583)
Q Consensus 314 ~~-dg~i~iwd~~~~ 327 (583)
+. ...|...++..+
T Consensus 163 ~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 163 NPKNGQLYRYDTASQ 177 (302)
T ss_dssp CTTTCCEEEEETTTT
T ss_pred eCCCceEEEEECCCC
Confidence 44 566766666543
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.044 Score=50.76 Aligned_cols=89 Identities=10% Similarity=0.026 Sum_probs=46.7
Q ss_pred CCceEEEEe-eCCeEEEEecCC----cEEEeecC-CCCCCeEEEEeeCeEE-EEEc-C---------CeEEEEeccceee
Q psy14906 42 RKETLFVTC-VGKAFHVYGCNH----FKLLSVSP-QHEDDITCLSSDFFHI-YTSA-N---------NIIYAWRRGIDIV 104 (583)
Q Consensus 42 ~~~~~i~~~-~~~~i~v~d~~~----~~~~~~~~-~h~~~v~~~~~~~~~~-~~~~-~---------~~i~vw~~~~~~~ 104 (583)
+...+++.+ .++.+.+||+.+ .+.+..++ .....-.+...++++. .++. + +.+.+||.....-
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W 98 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSW 98 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcE
Confidence 344555544 567899999863 44444444 2222333444567644 4444 2 3688888754333
Q ss_pred eeecc----cCccEEEEccCCCEEEEEeCC
Q psy14906 105 GTYKG----HTSPVHLILPFGPHLISVDEE 130 (583)
Q Consensus 105 ~~~~~----h~~~v~~is~~~~~l~s~~~d 130 (583)
..+.. ....-.++..+++.++.|+.+
T Consensus 99 ~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 99 VKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred EECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 33221 112222335677777777754
|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
Probab=97.03 E-value=0.1 Score=47.11 Aligned_cols=208 Identities=9% Similarity=0.008 Sum_probs=103.5
Q ss_pred CeEEEEecCCcEEEee--cCCCCCCeEEEEeeCeEEE-EEc----C-----CeEEEEeccceeeeeec---ccCccEEEE
Q psy14906 53 KAFHVYGCNHFKLLSV--SPQHEDDITCLSSDFFHIY-TSA----N-----NIIYAWRRGIDIVGTYK---GHTSPVHLI 117 (583)
Q Consensus 53 ~~i~v~d~~~~~~~~~--~~~h~~~v~~~~~~~~~~~-~~~----~-----~~i~vw~~~~~~~~~~~---~h~~~v~~i 117 (583)
+.+.+||+.+.+-... ++.....-.++..++++++ ++. + +.+.+||........+. .....-...
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 118 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVG 118 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEE
Confidence 5789999887654432 2222222233445665444 443 2 36888887543333322 111111222
Q ss_pred ccCCCEEEEEeCC-----CcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC-----CeEE
Q psy14906 118 LPFGPHLISVDEE-----SNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN-----KKII 187 (583)
Q Consensus 118 s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----~~i~ 187 (583)
..+++.++.|+.+ ..+.++|..+.+-...-... .....-.++.+ ++++++.|+.+ ..+.
T Consensus 119 ~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p---------~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 187 (308)
T 1zgk_A 119 VIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPML---------TRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAE 187 (308)
T ss_dssp EETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCS---------SCCBSCEEEEE--TTEEEEECCBCSSCBCCCEE
T ss_pred EECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCC---------ccccceEEEEE--CCEEEEEeCCCCCCcCceEE
Confidence 3466666666543 46888898876533222211 11112222222 56777777654 4688
Q ss_pred EEEccCCceeEE--EeccCCCeEEEEEecCCCCEEEEEcCC-----CcEEEEeCCCCeehh--hhhhccccceEEEEEec
Q psy14906 188 LHNILTDESLME--FIQTWGPVTALSFRTDGPPMMVSGSNT-----GHLTVWNLEDRQVEN--QIKKAHRKVVTGAHFLY 258 (583)
Q Consensus 188 iw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~--~~~~~~~~~v~~~~~~~ 258 (583)
+||+.+.+-... +........++.+ ++. +++.|+.+ ..+.+||+.+.+-.. .+... .... +++. -
T Consensus 188 ~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-r~~~-~~~~-~ 261 (308)
T 1zgk_A 188 CYYPERNEWRMITAMNTIRSGAGVCVL--HNC-IYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHR-RSAL-GITV-H 261 (308)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSC-CBSC-EEEE-E
T ss_pred EEeCCCCeEeeCCCCCCccccceEEEE--CCE-EEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCC-ccce-EEEE-E
Confidence 999876643221 1111111222222 555 77777654 469999998765332 22111 1111 2222 2
Q ss_pred CCCEEEEEeCC-----CeEEEEEc
Q psy14906 259 NEPLLVTSSPD-----NTLKLWIF 277 (583)
Q Consensus 259 ~~~~l~s~~~d-----~~i~~w~~ 277 (583)
++++++.|+.+ ..+.+||+
T Consensus 262 ~~~i~v~GG~~~~~~~~~v~~yd~ 285 (308)
T 1zgk_A 262 QGRIYVLGGYDGHTFLDSVECYDP 285 (308)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEET
T ss_pred CCEEEEEcCcCCCcccceEEEEcC
Confidence 67777777754 34555643
|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.036 Score=51.33 Aligned_cols=140 Identities=10% Similarity=0.015 Sum_probs=67.9
Q ss_pred ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec------CCcEEEEEc--cCCCCCceEE--eeccC
Q psy14906 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN------DQTVKVWHF--KQTGKPPLRS--IKLDN 503 (583)
Q Consensus 434 g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~------dg~i~iwd~--~~~~~~~~~~--~~~~~ 503 (583)
..+.+||..+.+-...-..+ ...... .+++.. ++++++.|+. ...+.+||+ .+. .-... +....
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p--~~~~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~--~W~~~~~~~~~~ 241 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESP--WYGTAG-AAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNL--KWNKLAPVSSPD 241 (357)
T ss_dssp CEEEEEETTTTEEEEEEECS--SCCCBS-CEEEEE-TTEEEEECCEEETTEECCCEEEEECC---C--EEEECCCSSTTT
T ss_pred ccEEEEeCCCCcEEECCCCC--CCCccc-ccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCC--cEEecCCCCCCc
Confidence 46888998766543321111 011111 122222 6677777764 235677776 332 11111 11111
Q ss_pred -CeeeEEeccCCcEEEEEeCC----------------------ceEEEEEccccc--eEEeecccccceeeEEecCCCcE
Q psy14906 504 -GISFFRTHQESSMLAVCLDD----------------------FTVNIIDIDTCT--IIRKLSGHMGQLTDADFSPDSRW 558 (583)
Q Consensus 504 -~v~~~~~s~~~~~l~~~~~d----------------------g~i~i~d~~~~~--~~~~~~~h~~~v~~l~~s~d~~~ 558 (583)
.....+...++++++.|+.+ ..+.+||+.+.+ .+..+...... ..+...++++
T Consensus 242 ~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i 319 (357)
T 2uvk_A 242 GVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSL 319 (357)
T ss_dssp CCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBS--SEEEEETTEE
T ss_pred ccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEE
Confidence 11222334467777777632 257889987653 33333322222 2233347888
Q ss_pred EEEEeCCC------eEEEEeCCCcccccc
Q psy14906 559 LITASMDC------TIRVWDIPSSQLIDC 581 (583)
Q Consensus 559 l~s~~~d~------~i~vw~~~~~~~~~~ 581 (583)
++.|+.++ .|.+.++++++.+..
T Consensus 320 ~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 320 LIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred EEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 88888653 466679888877653
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.085 Score=48.61 Aligned_cols=150 Identities=11% Similarity=0.044 Sum_probs=96.5
Q ss_pred eCCCCCEEEEEecCCeEEEEEccCCceeEEEecc----CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee-h----
Q psy14906 170 PSPVVDIIGVGLSNKKIILHNILTDESLMEFIQT----WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV-E---- 240 (583)
Q Consensus 170 ~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-~---- 240 (583)
.+.+|..++++ .++.||.-++......+.+... -..+..+..+|+|+ +||..+ +..|.|-.+..+.. .
T Consensus 28 ~~~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~-lLAl~g-~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 28 SSQNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGD-LLCLFN-DNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp EETTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSS-EEEEEC-SSEEEEEECCTTCSCCCCHH
T ss_pred EEcCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCC-EEEEec-CCeEEEEEecCccccCcccc
Confidence 34566666665 3468888888755445555543 23688999999999 777665 45899988873321 0
Q ss_pred -------hhhhhc-----cccceEEEEEecC---CCEEEEEeCCCeEEEEEccCCCCCceee------EEeccCCCCCee
Q psy14906 241 -------NQIKKA-----HRKVVTGAHFLYN---EPLLVTSSPDNTLKLWIFDKADGNGRLL------RIREGHSAPPNY 299 (583)
Q Consensus 241 -------~~~~~~-----~~~~v~~~~~~~~---~~~l~s~~~d~~i~~w~~~~~~~~~~~~------~~~~~~~~~v~~ 299 (583)
+.+..+ ...+|..+.|+|- +..|++-..|+.|++||+.........+ ..+......|.+
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEE
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEE
Confidence 011111 2467999999985 4589999999999999887532222211 111223357888
Q ss_pred EEEeeCCCCEEEEee--CCCcEEEEE
Q psy14906 300 IQFYGNSSDNILSAA--GDSTLRIFN 323 (583)
Q Consensus 300 ~~~~~~~~~~l~~~~--~dg~i~iwd 323 (583)
++|.+ ++-.|+..+ .+|.|+-.-
T Consensus 185 ~~Fg~-~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 185 LEFSK-DGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EEECT-TSSCEEEEECTTSCEEEEES
T ss_pred EEEcC-CCcEEEEEecCCCCCEEEEC
Confidence 99986 676677644 677776543
|
| >1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A | Back alignment and structure |
|---|
Probab=96.98 E-value=0.051 Score=58.19 Aligned_cols=224 Identities=8% Similarity=0.090 Sum_probs=137.1
Q ss_pred EEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe-eCeEEEEEcCCeEEEEeccc--eeeeeeccc----
Q psy14906 38 FIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS-DFFHIYTSANNIIYAWRRGI--DIVGTYKGH---- 110 (583)
Q Consensus 38 ~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~~~~~~i~vw~~~~--~~~~~~~~h---- 110 (583)
.+|. ..+|+.-.+..+.|+|+++.+.++...- ..+|.--.| +++.+.--.+..|..|++.+ .+.+.|..|
T Consensus 73 MnP~--~~iiALrag~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~ 149 (1630)
T 1xi4_A 73 MNPA--SKVIALKAGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA 149 (1630)
T ss_pred cCCC--cceEEEecCCeEEEeehHHhhhhccccc-CCCceEEEecCCCeeEEEcCCeEEEeccCCCCccHHHHhcchhcc
Confidence 4444 3456666799999999999888876653 445655555 77778777899999999853 566667666
Q ss_pred CccEEEE--ccCCCEEEEEeC-------CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeC--C-CCCEEE
Q psy14906 111 TSPVHLI--LPFGPHLISVDE-------ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPS--P-VVDIIG 178 (583)
Q Consensus 111 ~~~v~~i--s~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s--~-~~~~l~ 178 (583)
...|... +++.+|++..|- .|.+.+++.+.+. .+.+. +|.+....+... + ....++
T Consensus 150 ~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~ie-----------gha~~F~~~~~~~~~~~~~l~~ 217 (1630)
T 1xi4_A 150 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIE-----------GHAASFAQFKMEGNAEESTLFC 217 (1630)
T ss_pred cCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhh-----------HhHhhhheeccCCCCCCceEEE
Confidence 3445443 888998885432 4788888877542 22222 444433333332 1 122333
Q ss_pred EEec---CCeEEEEEccCC---ceeE-----E-E-e--ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhh
Q psy14906 179 VGLS---NKKIILHNILTD---ESLM-----E-F-I--QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI 243 (583)
Q Consensus 179 ~~~~---d~~i~iw~~~~~---~~~~-----~-~-~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 243 (583)
.+.. .+.++|.++... .... . + . ...+-..++..++.-. +++.-+.-|.+.++|++++.++..-
T Consensus 218 f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~d~~t~~~i~~~ 296 (1630)
T 1xi4_A 218 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYMN 296 (1630)
T ss_pred EEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEEecccchhhhhc
Confidence 3222 267888887532 1111 0 0 1 1123345666677655 7888888999999999999988766
Q ss_pred hhccccceEEEEEecCCCEEEEEeCCCeEEEEEcc
Q psy14906 244 KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 244 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~ 278 (583)
+-....|...+......-++.....|.|.--.++
T Consensus 297 -ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 297 -RISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (1630)
T ss_pred -cccCCceEEeccCCCCCceEEEcCCceEEEEEEc
Confidence 4455555555544443345555566766555444
|
| >1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.049 Score=45.08 Aligned_cols=103 Identities=19% Similarity=0.104 Sum_probs=64.5
Q ss_pred cceEEEeeCCCCCEEEEEecCCeEEEEEccCCcee------EEEe--ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q psy14906 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL------MEFI--QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL 234 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~------~~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 234 (583)
..+..++|+|+|.+.++ .+|.+.-.+..+.+.. ..+- +- ..-.++.|.|+|. +.++ .||.|.-++.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw-~~F~a~~fD~~G~-LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGW-NQFQFLFFDPNGY-LYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCG-GGCSEEEECTTSC-EEEE--ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccc-ccceEEEECCCCC-EEEe--CCCEEEEeCC
Confidence 47779999999997777 7777666665442111 1111 11 1247899999997 4444 5699988876
Q ss_pred CCCeehhhhhhcc------ccceEEEEEecCCCEEEEEeCCCeEE
Q psy14906 235 EDRQVENQIKKAH------RKVVTGAHFLYNEPLLVTSSPDNTLK 273 (583)
Q Consensus 235 ~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~~~d~~i~ 273 (583)
.+...-.-+..+- -..+..|.|.|+|.+.+.. |+.+.
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 4432222111111 1478999999999877666 77643
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.28 Score=44.41 Aligned_cols=146 Identities=11% Similarity=0.057 Sum_probs=75.7
Q ss_pred CCcEEEEEecC-------ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecC------CcEEEEEcc
Q psy14906 423 CGNFVLIGYSS-------GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGND------QTVKVWHFK 489 (583)
Q Consensus 423 ~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d------g~i~iwd~~ 489 (583)
+++.++.|+.+ ..+.+||..+.+-...-.. ......- +++. .++++++.|+.+ ..+.+||+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~ 183 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNL---PIKVYGH-NVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPK 183 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCC---SSCEESC-EEEE-ETTEEEEECCEESSSCBCCCEEEEETT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCC---CCccccc-EEEE-ECCEEEEEcCCCCCCCccceEEEEcCC
Confidence 56666666643 3588888876654332111 1111111 1222 467777777642 358889987
Q ss_pred CCCCCceEEeeccC--CeeeEEeccCCcEEEEEeCC-----ceEEEEEccccceEE--eecccccceeeEEecCCCcEEE
Q psy14906 490 QTGKPPLRSIKLDN--GISFFRTHQESSMLAVCLDD-----FTVNIIDIDTCTIIR--KLSGHMGQLTDADFSPDSRWLI 560 (583)
Q Consensus 490 ~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~--~~~~h~~~v~~l~~s~d~~~l~ 560 (583)
+. +-...-.... .-.+++ .-++++++.|+.+ ..+.+||+.+.+-.. .+......-.. ...++++++
T Consensus 184 ~~--~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v 258 (318)
T 2woz_A 184 KG--DWKDLAPMKTPRSMFGVA-IHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISL--VSLAGSLYA 258 (318)
T ss_dssp TT--EEEEECCCSSCCBSCEEE-EETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEE--EEETTEEEE
T ss_pred CC--EEEECCCCCCCcccceEE-EECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEE--EEECCEEEE
Confidence 75 2222111111 111222 2367777777643 467889987764322 22211111122 223677777
Q ss_pred EEeCC--------------CeEEEEeCCCccc
Q psy14906 561 TASMD--------------CTIRVWDIPSSQL 578 (583)
Q Consensus 561 s~~~d--------------~~i~vw~~~~~~~ 578 (583)
.|+.+ ..+.+||+.+.+.
T Consensus 259 ~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 259 IGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp ECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred ECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 77654 3578899887654
|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.35 Score=43.71 Aligned_cols=151 Identities=5% Similarity=0.012 Sum_probs=74.0
Q ss_pred CCCEEEEEecC-------CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcC------CCcEEEEeCCCCee
Q psy14906 173 VVDIIGVGLSN-------KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSN------TGHLTVWNLEDRQV 239 (583)
Q Consensus 173 ~~~~l~~~~~d-------~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~ 239 (583)
++++++.|+.+ ..+.+||..+.+-...-..........+...++. +++.|+. -..+.+||+.+.+-
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGM-IYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTE-EEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCE-EEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 56777777754 3578888876643322111111111111224565 6677764 24589999987653
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCC-----eEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDN-----TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-----~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 314 (583)
...-.......-.+++. -++++++.|+.++ .+.+| +..+.....+..+...... .++... +++.++.|+
T Consensus 188 ~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~y--d~~~~~W~~~~~~p~~r~~-~~~~~~--~~~i~v~GG 261 (318)
T 2woz_A 188 KDLAPMKTPRSMFGVAI-HKGKIVIAGGVTEDGLSASVEAF--DLKTNKWEVMTEFPQERSS-ISLVSL--AGSLYAIGG 261 (318)
T ss_dssp EEECCCSSCCBSCEEEE-ETTEEEEEEEEETTEEEEEEEEE--ETTTCCEEECCCCSSCCBS-CEEEEE--TTEEEEECC
T ss_pred EECCCCCCCcccceEEE-ECCEEEEEcCcCCCCccceEEEE--ECCCCeEEECCCCCCcccc-eEEEEE--CCEEEEECC
Confidence 22110011111112222 3667777776532 34455 4444344444333221111 223332 567777776
Q ss_pred CC--------------CcEEEEEccccccc
Q psy14906 315 GD--------------STLRIFNTKSETSN 330 (583)
Q Consensus 315 ~d--------------g~i~iwd~~~~~~~ 330 (583)
.+ ..+.+||+.+.+-.
T Consensus 262 ~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 291 (318)
T 2woz_A 262 FAMIQLESKEFAPTEVNDIWKYEDDKKEWA 291 (318)
T ss_dssp BCCBC----CCBCCBCCCEEEEETTTTEEE
T ss_pred eeccCCCCceeccceeeeEEEEeCCCCEeh
Confidence 53 35777888776543
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.39 Score=43.63 Aligned_cols=145 Identities=17% Similarity=0.138 Sum_probs=78.7
Q ss_pred CCceEEEEccCCcEEEEEec-------------CceEEEEEcccCcc-------ccccCCCCCCCcccCeeEEEEeCCCc
Q psy14906 413 SKPTCVYITHCGNFVLIGYS-------------SGHVDRFNIQSGAH-------RGSYGHDNQPGHVGGVRGVVSDNLNQ 472 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~-------------dg~i~i~d~~~~~~-------~~~~~~~~~~~h~~~v~~~~~s~~~~ 472 (583)
.....+.|.|||.+.++.+. .|.|.-++....-. ...+. .+|. ....++|+|++.
T Consensus 140 H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a----~G~R-Np~Gla~dp~G~ 214 (347)
T 3das_A 140 HNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYS----YGHR-NVQGLAWDDKQR 214 (347)
T ss_dssp CCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEE----BCCS-BCCEEEECTTCC
T ss_pred ccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEe----eCCC-CcceEEECCCCC
Confidence 34567899999976665332 35565555542200 00110 2332 356899999887
Q ss_pred EEEEe-ecCCcEEEEEccCCC----------------CCceEEeecc-CCeeeEEeccCCcEEEEEeCCceEEEEEcccc
Q psy14906 473 IVISG-GNDQTVKVWHFKQTG----------------KPPLRSIKLD-NGISFFRTHQESSMLAVCLDDFTVNIIDIDTC 534 (583)
Q Consensus 473 ~l~s~-~~dg~i~iwd~~~~~----------------~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~ 534 (583)
+.++= +.|+.=.|--+..+. ..++..+... .....++|. +|.++...-..+.|....++..
T Consensus 215 L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~ 293 (347)
T 3das_A 215 LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGT 293 (347)
T ss_dssp EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETT
T ss_pred EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCC
Confidence 55543 233322232222221 0122222222 245566666 4666666666667777777654
Q ss_pred ce----EEeecccccceeeEEecCCCcEEEEEe
Q psy14906 535 TI----IRKLSGHMGQLTDADFSPDSRWLITAS 563 (583)
Q Consensus 535 ~~----~~~~~~h~~~v~~l~~s~d~~~l~s~~ 563 (583)
.. ...+.+...++.+|+..|||.++++.+
T Consensus 294 ~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 294 AAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred ceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 32 233444457899999999998776654
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0082 Score=54.23 Aligned_cols=105 Identities=10% Similarity=0.054 Sum_probs=60.8
Q ss_pred CCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCee--------eEEec-----cCCcEEEEEeCCceEEEEEccccce
Q psy14906 470 LNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS--------FFRTH-----QESSMLAVCLDDFTVNIIDIDTCTI 536 (583)
Q Consensus 470 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~--------~~~~s-----~~~~~l~~~~~dg~i~i~d~~~~~~ 536 (583)
.+..+++++.+|.+...|+.++ +.+..+....+.. |.... ..+..++.+..+..+.+.+ ++|+
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG--~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~- 185 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNG--EIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGA- 185 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTC--CEEEEESTTCBCC--------------------CCEEEEEEEEEECEECC-TTSC-
T ss_pred cCCEEEEEecCCEEEEEECCCC--cEEEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCC-
Confidence 4567889999999999999999 8888876553211 11111 1235677777777777766 4453
Q ss_pred EEeec-----cccc--ce-eeEEecCCCcEEEEEeCCCeEEEEeCCCcccc
Q psy14906 537 IRKLS-----GHMG--QL-TDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579 (583)
Q Consensus 537 ~~~~~-----~h~~--~v-~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~ 579 (583)
+..++ .+.- .+ ..-..+.|+.++ .++.||.|.-.|..+|+.+
T Consensus 186 ~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~-~~~~dg~v~A~d~~~G~~~ 235 (339)
T 2be1_A 186 SYNVTYSTWQQNVLDVPLALQNTFSKDGMCI-APFRDKSLLASDLDFRIAR 235 (339)
T ss_dssp CCCCEEEEEECCTTTHHHHTTCSSCSSSCCE-EEETTTEEEEECSTTCCEE
T ss_pred eEEEecccccccccccccccccccccCCcEE-EECCCCEEEEEECCCCcEE
Confidence 22211 1000 00 001112356654 4677888888888877764
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=96.07 E-value=0.26 Score=47.07 Aligned_cols=109 Identities=15% Similarity=0.178 Sum_probs=62.3
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCcccc--ccCCCCC-CCcccCeeEEEEeCC---CcEE-EEeec------
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRG--SYGHDNQ-PGHVGGVRGVVSDNL---NQIV-ISGGN------ 479 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~-~~h~~~v~~~~~s~~---~~~l-~s~~~------ 479 (583)
.....++|.|+|+++++-...+.|++++..++.... .+..... .........|+|+|+ +..| ++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 457899999999977765544578888765554322 2211100 113567889999995 4444 44332
Q ss_pred ------CCcEEEEEccCCCCC------ceEEeec--cCCeeeEEeccCCcEEEEEe
Q psy14906 480 ------DQTVKVWHFKQTGKP------PLRSIKL--DNGISFFRTHQESSMLAVCL 521 (583)
Q Consensus 480 ------dg~i~iwd~~~~~~~------~~~~~~~--~~~v~~~~~s~~~~~l~~~~ 521 (583)
...|.-+++...... .+..+.. ......++|.|||.+.++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234666665432101 1111211 13478899999998666644
|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B | Back alignment and structure |
|---|
Probab=95.83 E-value=0.81 Score=40.34 Aligned_cols=206 Identities=11% Similarity=0.049 Sum_probs=110.1
Q ss_pred eEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeC-eEEEEEcCCeEEEEeccce-eeeeecccCccEEEEccCCC
Q psy14906 45 TLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDF-FHIYTSANNIIYAWRRGID-IVGTYKGHTSPVHLILPFGP 122 (583)
Q Consensus 45 ~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~i~vw~~~~~-~~~~~~~h~~~v~~is~~~~ 122 (583)
..++.. ++.|+.|-....-++..-......|..++... ..++.. |+.|..|-.+.. .+-....-...|..++.-..
T Consensus 35 h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~ 112 (282)
T 3qhy_B 35 HGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW 112 (282)
T ss_dssp EEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT
T ss_pred eEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC
Confidence 334444 89999998665322221112344678888743 333344 999999975311 11111111346888866666
Q ss_pred EEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEec
Q psy14906 123 HLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQ 202 (583)
Q Consensus 123 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~ 202 (583)
..+... ||.|..|-.....++.... .....|..++...+- .++ -. +|.+..|-......+..-..
T Consensus 113 hs~al~-~G~v~~wG~n~~gqlg~~~-----------~~~~~i~~i~~G~~~-~~~-l~-~G~v~~wG~n~~gqlg~p~~ 177 (282)
T 3qhy_B 113 ASYALK-DGKVIAWGDDSDGQTTVPA-----------EAQSGVTALDGGVYT-ALA-VK-NGGVIAWGDNYFGQTTVPAE 177 (282)
T ss_dssp EEEEEE-TTEEEEEECCTTSTTSCCG-----------GGGSSEEEEEECSSE-EEE-EE-TTEEEEEECCTTSTTSCCGG
T ss_pred EEEEEe-CCeEEEecCCCCCcCCCCc-----------cCCCCeEEEEcccCE-EEE-EE-CCEEEEecCCCCCCCCCcee
Confidence 666667 9999999865522211000 223456666554332 222 23 78888887543222211111
Q ss_pred cCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy14906 203 TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275 (583)
Q Consensus 203 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w 275 (583)
....|..++...+.. ++. .||.|..|-....-.+..- ......|..++...... ++ -. ||.+..|
T Consensus 178 ~~~~v~~i~~G~~hs--~al--~~G~v~~wG~n~~gqlg~p-~~~~~~v~~i~~G~~h~-~a-l~-~g~v~~w 242 (282)
T 3qhy_B 178 AQSGVDDVAGGIFHS--LAL--KDGKVIAWGDNRYKQTTVP-TEALSGVSAIASGEWYS-LA-LK-NGKVIAW 242 (282)
T ss_dssp GGSSEEEEEECSSEE--EEE--ETTEEEEEECCTTSTTCCC-GGGGSSCCEEEECSSCE-EE-EE-TTEEEEE
T ss_pred cCCCeEEEEecCCEE--EEE--ECCeEEEEECCCCCCCCCC-cccCCCceEEEcCCCEE-EE-EE-CCEEEEe
Confidence 124677776655532 333 5899999976543222111 11224566776544333 33 33 8999999
|
| >2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.77 E-value=0.034 Score=50.21 Aligned_cols=113 Identities=10% Similarity=0.036 Sum_probs=72.2
Q ss_pred CcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEE---eCCCcEEEEe-ecCCcEEEEEccCCCCCceEEe
Q psy14906 424 GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVS---DNLNQIVISG-GNDQTVKVWHFKQTGKPPLRSI 499 (583)
Q Consensus 424 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~---s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~ 499 (583)
+..+++++.||.|+-+|..+|+....+.. ....++....- ..++..++.. ..||.|..++..++ .....+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~----~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G--~~~~~~ 83 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEP----ENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG--LQKLPL 83 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECG----GGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE--EEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecC----CccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC--cEEeee
Confidence 35789999999999999999998887732 11112211110 0133344443 57999999998776 444333
Q ss_pred eccCCee--eEEec-----------cCCcEEEEEeCCceEEEEEccccceEEeecc
Q psy14906 500 KLDNGIS--FFRTH-----------QESSMLAVCLDDFTVNIIDIDTCTIIRKLSG 542 (583)
Q Consensus 500 ~~~~~v~--~~~~s-----------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 542 (583)
.....+. -+... ..+..+++|+.+|.+...|+.+|+.+.++..
T Consensus 84 ~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 84 SIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp EHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 3322111 12211 1466888999999999999999999988763
|
| >3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=95.47 E-value=1.4 Score=39.92 Aligned_cols=114 Identities=12% Similarity=0.097 Sum_probs=64.3
Q ss_pred EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee--hhh---hhhccccceEEEEEecC----CCEEEEEe--C
Q psy14906 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV--ENQ---IKKAHRKVVTGAHFLYN----EPLLVTSS--P 268 (583)
Q Consensus 200 ~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~~~---~~~~~~~~v~~~~~~~~----~~~l~s~~--~ 268 (583)
+...-...+.|+|.|||. ++++--..|.|++++..+++. +.. +..........|+++|+ +.+.++-+ .
T Consensus 27 va~gL~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EECCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred eecCCCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 333336778999999998 777766589999998765543 111 11223567889999995 43333322 3
Q ss_pred CCeEEEEEccCCC------CCcee-eEEec-cCCCCCeeEEEeeCCCCEEEEeeC
Q psy14906 269 DNTLKLWIFDKAD------GNGRL-LRIRE-GHSAPPNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 269 d~~i~~w~~~~~~------~~~~~-~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~ 315 (583)
++.|.-|.++... ...+. +..+. ........+.|.| |+.+.++.+.
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd 159 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGE 159 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBC
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECC
Confidence 3444445443211 01122 22222 1122346789987 7776666554
|
| >1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A | Back alignment and structure |
|---|
Probab=95.40 E-value=1.9 Score=41.02 Aligned_cols=109 Identities=14% Similarity=0.157 Sum_probs=59.6
Q ss_pred CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee--hhhhhh-----ccccceEEEEEecC---CCEEEEEeC------
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV--ENQIKK-----AHRKVVTGAHFLYN---EPLLVTSSP------ 268 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~-----~~~~~v~~~~~~~~---~~~l~s~~~------ 268 (583)
.....|+|.|+|+ ++++-...+.|++++..+++. +..+.. ........|+|+|+ +..|..+..
T Consensus 27 ~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGPDNQ-IWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcCCCc-EEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 5678999999998 666655445788888655432 222211 12456789999995 444444432
Q ss_pred -------CCeEEEEEccCCCCC---ceee-EEecc-CCCCCeeEEEeeCCCCEEEEeeC
Q psy14906 269 -------DNTLKLWIFDKADGN---GRLL-RIREG-HSAPPNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 269 -------d~~i~~w~~~~~~~~---~~~~-~~~~~-~~~~v~~~~~~~~~~~~l~~~~~ 315 (583)
...|.-++++..... .+.+ ..+.. .......++|.| |+.+.++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECC
Confidence 123444443322111 1111 11221 123457899987 7776666554
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=94.49 E-value=4.4 Score=41.17 Aligned_cols=202 Identities=11% Similarity=0.086 Sum_probs=100.9
Q ss_pred cCCCEEEEEeCC----CcEEEEEcCCCcEEEEe-eccCCceEEecccCCcceEEEeeCCCCCEEEEEecC------CeEE
Q psy14906 119 PFGPHLISVDEE----SNVKVWDIKAEETYLEL-SFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN------KKII 187 (583)
Q Consensus 119 ~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------~~i~ 187 (583)
.++..++.||.+ ..+.++|..+++-...- ....... +.....-.++.+..++++++.|+.+ ..+.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~----p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~ 471 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEV----PVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNW 471 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCC----CCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCC----CccccceEEEEEccCCEEEEEcCCCCCCCccccEE
Confidence 456666666643 46888888876543322 1100000 0112222333333267778887654 3578
Q ss_pred EEEccCCceeEE--EeccCCCeEEEEEecCCCCEEEEEcCCC--cEEEEeCCCCeehhhhh----hccccceEEEEEecC
Q psy14906 188 LHNILTDESLME--FIQTWGPVTALSFRTDGPPMMVSGSNTG--HLTVWNLEDRQVENQIK----KAHRKVVTGAHFLYN 259 (583)
Q Consensus 188 iw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~----~~~~~~v~~~~~~~~ 259 (583)
+||..+.+-... +...... .+++...++. +++.|+.++ .+.+||..+.+-...-. ........++.+..+
T Consensus 472 ~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~ 549 (695)
T 2zwa_A 472 IFDMKTREWSMIKSLSHTRFR-HSACSLPDGN-VLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPV 549 (695)
T ss_dssp EEETTTTEEEECCCCSBCCBS-CEEEECTTSC-EEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETT
T ss_pred EEeCCCCcEEECCCCCCCccc-ceEEEEcCCE-EEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCC
Confidence 899877533221 2111111 1222223666 788887654 69999998765322110 111112233555555
Q ss_pred -CCEEEEEeC--C-----CeEEEEEccCCCCC------ceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC--------CC
Q psy14906 260 -EPLLVTSSP--D-----NTLKLWIFDKADGN------GRLLRIREGHSAPPNYIQFYGNSSDNILSAAG--------DS 317 (583)
Q Consensus 260 -~~~l~s~~~--d-----~~i~~w~~~~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--------dg 317 (583)
+++++.|+. + ..+..||+.. .. ...+.........-.++.... ++..++.|+. ..
T Consensus 550 ~~~iyv~GG~~~~~~~~~~~v~~yd~~~--~~w~~~~~W~~~~~~p~~~R~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~ 626 (695)
T 2zwa_A 550 SKQGIILGGGFMDQTTVSDKAIIFKYDA--ENATEPITVIKKLQHPLFQRYGSQIKYIT-PRKLLIVGGTSPSGLFDRTN 626 (695)
T ss_dssp TTEEEEECCBCTTSSCBCCEEEEEEECT--TCSSCCEEEEEEEECGGGCCBSCEEEEEE-TTEEEEECCBCSSCCCCTTT
T ss_pred CCEEEEECCcCCCCCeeeCcEEEEEccC--CccccceEEEEcCCCCCCCcccceEEEeC-CCEEEEECCccCCCCCCCCC
Confidence 667777765 2 3466775543 23 233333211111112233331 3777777774 34
Q ss_pred cEEEEEcccccc
Q psy14906 318 TLRIFNTKSETS 329 (583)
Q Consensus 318 ~i~iwd~~~~~~ 329 (583)
.+.+||+.+...
T Consensus 627 ~v~~yd~~t~~W 638 (695)
T 2zwa_A 627 SIISLDPLSETL 638 (695)
T ss_dssp SEEEEETTTTEE
T ss_pred eEEEEECCCCeE
Confidence 588899887654
|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
Probab=94.01 E-value=1.5 Score=44.69 Aligned_cols=150 Identities=12% Similarity=0.050 Sum_probs=82.3
Q ss_pred CCcEEEEEecC------ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCC--cEEEEEccCCCCC
Q psy14906 423 CGNFVLIGYSS------GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ--TVKVWHFKQTGKP 494 (583)
Q Consensus 423 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg--~i~iwd~~~~~~~ 494 (583)
+++.++.|+.+ ..+.+||..+..-...-.. .. ...-.+++...++++++.|+.++ .+.+||..+. .
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~---p~-~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~--~ 524 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSL---SH-TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE--I 524 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCC---SB-CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTT--E
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCC---CC-CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCC--c
Confidence 77888887754 3588899887543332111 11 11112233324788888888655 6889998875 2
Q ss_pred ceEEee---c--c-CCeeeEEeccC-CcEEEEEeC--C-----ceEEEEEccccce-----EEeecc--cccce-eeEEe
Q psy14906 495 PLRSIK---L--D-NGISFFRTHQE-SSMLAVCLD--D-----FTVNIIDIDTCTI-----IRKLSG--HMGQL-TDADF 552 (583)
Q Consensus 495 ~~~~~~---~--~-~~v~~~~~s~~-~~~l~~~~~--d-----g~i~i~d~~~~~~-----~~~~~~--h~~~v-~~l~~ 552 (583)
-..... . . ....++.+..+ +++++.|+. + +.+.+||+.+.+- ...+.. ..... .++..
T Consensus 525 W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~ 604 (695)
T 2zwa_A 525 FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKY 604 (695)
T ss_dssp EEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEE
T ss_pred eEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEE
Confidence 211111 1 1 12233555554 677777765 2 4689999987761 111211 11111 12223
Q ss_pred cCCCcEEEEEeCC--------CeEEEEeCCCccc
Q psy14906 553 SPDSRWLITASMD--------CTIRVWDIPSSQL 578 (583)
Q Consensus 553 s~d~~~l~s~~~d--------~~i~vw~~~~~~~ 578 (583)
..++++++.|+.+ ..+.+||+.+++.
T Consensus 605 ~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 605 ITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp EETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred eCCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 3337777877743 4589999887654
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=92.88 E-value=9 Score=38.85 Aligned_cols=94 Identities=10% Similarity=0.074 Sum_probs=55.2
Q ss_pred cCceEEEEEcccCc-------cccc-cCCCCCCCcccCeeEEEEeCCCcEEEEeecCCc--EEEEEccCCCCC-ceEE-e
Q psy14906 432 SSGHVDRFNIQSGA-------HRGS-YGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQT--VKVWHFKQTGKP-PLRS-I 499 (583)
Q Consensus 432 ~dg~i~i~d~~~~~-------~~~~-~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~--i~iwd~~~~~~~-~~~~-~ 499 (583)
..+.|...++.++. .... +. ......+..+.+..+ .++++...++. +.++++.++ . .... +
T Consensus 318 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g--~~~~~~~i 390 (711)
T 4hvt_A 318 KAGSLVALHFTDLLKTESDKTSLKILFT----PTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENE--QWTKPVVL 390 (711)
T ss_dssp CTTCEEEEEGGGGGSCGGGCTTCEEEEC----CCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETT--EECCCEEE
T ss_pred CCCeEEEEECCcccccccccccceEEEC----CCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCC--ceEEEecc
Confidence 46678888887642 1111 21 234556788888875 56677777765 667776654 2 1222 3
Q ss_pred ec--cCCeeeEEeccCCcEEEE-EeC---CceEEEEEcc
Q psy14906 500 KL--DNGISFFRTHQESSMLAV-CLD---DFTVNIIDID 532 (583)
Q Consensus 500 ~~--~~~v~~~~~s~~~~~l~~-~~~---dg~i~i~d~~ 532 (583)
.. .+.+.....++++..++. .+. -+.+..+|+.
T Consensus 391 ~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 391 KLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp CCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 33 245666666777764443 332 3678888876
|
| >3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=91.51 E-value=8.8 Score=35.67 Aligned_cols=136 Identities=9% Similarity=0.012 Sum_probs=62.2
Q ss_pred CceEEEEccC-CcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCC-CcEEEEeec-----------C
Q psy14906 414 KPTCVYITHC-GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNL-NQIVISGGN-----------D 480 (583)
Q Consensus 414 ~i~~~~~s~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~-----------d 480 (583)
.+.++.++|+ ...++++...+ |...+- .++.-..+...........+.+++++|. ...|..+.. +
T Consensus 233 ~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~ 310 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPG 310 (394)
T ss_dssp CEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCC
T ss_pred ceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCC
Confidence 4678888886 45666666555 444332 2222222210000111134567888763 333333321 3
Q ss_pred CcEEEEEccCCCCCceEEeec--cC-------CeeeEEeccCC-cEEEEEeCCceEEEEEccccceEEeecccccceeeE
Q psy14906 481 QTVKVWHFKQTGKPPLRSIKL--DN-------GISFFRTHQES-SMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDA 550 (583)
Q Consensus 481 g~i~iwd~~~~~~~~~~~~~~--~~-------~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l 550 (583)
+...+|....+. +.-..+.. .. ....++++|.. ..|++++.++.|..- .+.++.-..+..+-..+.++
T Consensus 311 ~~~~~~~S~DgG-~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S-~D~G~tW~~~~~~lp~~~~v 388 (394)
T 3b7f_A 311 GKPAVYVTRDAG-ESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWAS-ADEGEHWQCIASHLPHIYAV 388 (394)
T ss_dssp SSCCEEEESSTT-SCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEE-SSTTSBCEEEECSCSCEEEE
T ss_pred CceeEEEECCCC-CCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEE-CCCCCCceEcccCCCCeeEE
Confidence 334566555432 22222211 11 01357888743 456666656554432 23344333444344456676
Q ss_pred Eec
Q psy14906 551 DFS 553 (583)
Q Consensus 551 ~~s 553 (583)
+|.
T Consensus 389 ~~~ 391 (394)
T 3b7f_A 389 QSA 391 (394)
T ss_dssp EEE
T ss_pred EEe
Confidence 663
|
| >3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A | Back alignment and structure |
|---|
Probab=91.37 E-value=11 Score=36.44 Aligned_cols=81 Identities=12% Similarity=0.093 Sum_probs=58.6
Q ss_pred ceEEeeccCCeeeEEeccCCcEEEEEeC-CceEEEEEccccce-------------EEeecccccceeeEEecCCCcEEE
Q psy14906 495 PLRSIKLDNGISFFRTHQESSMLAVCLD-DFTVNIIDIDTCTI-------------IRKLSGHMGQLTDADFSPDSRWLI 560 (583)
Q Consensus 495 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~-------------~~~~~~h~~~v~~l~~s~d~~~l~ 560 (583)
.++.+........+.++|||+++++++. +.++.++|++.... ..+.+ -.-.....+|.++|.-..
T Consensus 315 ~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYT 393 (638)
T 3sbq_A 315 FTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYT 393 (638)
T ss_dssp SEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEE
T ss_pred eEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEe
Confidence 3444555567778999999998887665 67999999874211 22233 234567889999996666
Q ss_pred EEeCCCeEEEEeCCCc
Q psy14906 561 TASMDCTIRVWDIPSS 576 (583)
Q Consensus 561 s~~~d~~i~vw~~~~~ 576 (583)
|.-.|..|.-|++...
T Consensus 394 tlfidSqvvkWni~~a 409 (638)
T 3sbq_A 394 TLFIDSQVVKWNMEEA 409 (638)
T ss_dssp EETTTTEEEEEEHHHH
T ss_pred eeeecceEEEEeccHH
Confidence 7779999999999653
|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B | Back alignment and structure |
|---|
Probab=90.92 E-value=7.8 Score=33.98 Aligned_cols=67 Identities=7% Similarity=-0.072 Sum_probs=35.5
Q ss_pred cceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccc
Q psy14906 249 KVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326 (583)
Q Consensus 249 ~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 326 (583)
..|..++.... +.+.-. ||.+..|-.+.....+.+ ......|..++.. ....++. . ||.++.|-...
T Consensus 24 ~~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~p----~~~~~~i~~ia~G--~~hs~~l-~-~G~v~~wG~n~ 90 (282)
T 3qhy_B 24 SGVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTMP----AATQSGVDAIAAG--NYHSLAL-K-DGEVIAWGGNE 90 (282)
T ss_dssp SSCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSCC----GGGGSCCCEEEEC--SSEEEEE-E-TTEEEEEECCT
T ss_pred CCCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCCC----ccCCCCEEEEEeC--CCEEEEE-E-CCEEEEeeCCC
Confidence 36777766433 333335 899999954322111111 1122357777764 2333343 4 89999997654
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=88.39 E-value=10 Score=40.19 Aligned_cols=33 Identities=15% Similarity=0.220 Sum_probs=29.4
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeecc
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEETYLELSFD 150 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 150 (583)
.++..++++.+.|+++|+|++.+++++.+..+.
T Consensus 244 ~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~ 276 (950)
T 4gq2_M 244 LSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 276 (950)
T ss_dssp ETTTTEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred cCCCcEEEEEECCCEEEEEECCCCCeEeeeccc
Confidence 667789999999999999999999999987653
|
| >3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=84.95 E-value=24 Score=32.62 Aligned_cols=156 Identities=7% Similarity=0.008 Sum_probs=72.3
Q ss_pred cceEEEeeCCC-CCEEEEEecCCeEEEEEccCCceeEEEecc-------------CCCeEEEEEecCCCCEEEEEcCCCc
Q psy14906 163 SCVNVLEPSPV-VDIIGVGLSNKKIILHNILTDESLMEFIQT-------------WGPVTALSFRTDGPPMMVSGSNTGH 228 (583)
Q Consensus 163 ~~i~~~~~s~~-~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~l~s~~~dg~ 228 (583)
..+.+|.++|. ...|.++..++.|...+ ..++.-..+... ...+.++.+.|+....++.+...+
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g- 254 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG- 254 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-
Confidence 46889999983 44555555545444332 223322222110 124889999987433566666544
Q ss_pred EEEEeCCCCeehhhhhhcc-c---cceEEEEEecC-CCEEEEEeC-----------CCeEEEEEccCCCCCceeeEE-ec
Q psy14906 229 LTVWNLEDRQVENQIKKAH-R---KVVTGAHFLYN-EPLLVTSSP-----------DNTLKLWIFDKADGNGRLLRI-RE 291 (583)
Q Consensus 229 i~vwd~~~~~~~~~~~~~~-~---~~v~~~~~~~~-~~~l~s~~~-----------d~~i~~w~~~~~~~~~~~~~~-~~ 291 (583)
|...+-. ++.-..+.... . ..+.++++.|. ...+..+.. ++...+|.-.......+.+.. +.
T Consensus 255 l~~s~D~-G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp 333 (394)
T 3b7f_A 255 IYRMDRR-EGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLP 333 (394)
T ss_dssp EEEEETT-TTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSC
T ss_pred EEEeCCC-CCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCC
Confidence 4444322 22111111111 1 34567788763 333444421 233445532221112222211 11
Q ss_pred cCCC----CCeeEEEeeCCCCEEEEeeCCCcEEE
Q psy14906 292 GHSA----PPNYIQFYGNSSDNILSAAGDSTLRI 321 (583)
Q Consensus 292 ~~~~----~v~~~~~~~~~~~~l~~~~~dg~i~i 321 (583)
.... ....++++|.+...|+.++.++.|..
T Consensus 334 ~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~ 367 (394)
T 3b7f_A 334 TDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWA 367 (394)
T ss_dssp CSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEE
T ss_pred CccccceEEEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 1000 12457887755566777766665543
|
| >4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-} | Back alignment and structure |
|---|
Probab=83.77 E-value=22 Score=38.56 Aligned_cols=36 Identities=19% Similarity=0.362 Sum_probs=31.1
Q ss_pred ceeeEEecCCCcEEEEEeCCCeEEEEeCCCcccccc
Q psy14906 546 QLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDC 581 (583)
Q Consensus 546 ~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~ 581 (583)
.+.+++..++..+|++-+.|+++|+|++.+++++.+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 455666778889999999999999999999998875
|
| >4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi} | Back alignment and structure |
|---|
Probab=83.15 E-value=42 Score=34.01 Aligned_cols=224 Identities=15% Similarity=0.173 Sum_probs=117.3
Q ss_pred EEEeCCCceEEEEeeCC----eEEEEecCCcEEEee-cCC-CCC------CeEEEEe-eC-eEEEEE-----------cC
Q psy14906 37 RFIRRRKETLFVTCVGK----AFHVYGCNHFKLLSV-SPQ-HED------DITCLSS-DF-FHIYTS-----------AN 91 (583)
Q Consensus 37 ~~~p~~~~~~i~~~~~~----~i~v~d~~~~~~~~~-~~~-h~~------~v~~~~~-~~-~~~~~~-----------~~ 91 (583)
+++|+++..++..+.+| .++++|+++++.+.- +.+ -+. ....+++ |. .++++. ..
T Consensus 136 ~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 136 NCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp ECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSB
T ss_pred ecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCC
Confidence 37788888888877555 699999999998742 221 111 0122243 33 333332 22
Q ss_pred CeEEEEeccc---eeeeeecccCccE--EE-EccCCCE-----EEEEeCC---CcEEEEEcCC--CcEEEEeeccCCceE
Q psy14906 92 NIIYAWRRGI---DIVGTYKGHTSPV--HL-ILPFGPH-----LISVDEE---SNVKVWDIKA--EETYLELSFDNDTFK 155 (583)
Q Consensus 92 ~~i~vw~~~~---~~~~~~~~h~~~v--~~-is~~~~~-----l~s~~~d---g~i~iwd~~~--~~~~~~~~~~~~~~~ 155 (583)
..|+.|.++. +-...+++....+ .. +++++++ +++.+.+ ..+.+.+... ++ +..+...
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~----- 289 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMP----- 289 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSC-----
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecC-----
Confidence 4799999753 2344555544433 22 2667663 4443322 4466666553 32 3333321
Q ss_pred EecccCCcceEEEeeCCCCCEEEEE----------ecCCeEEEEEccCCc-------eeEE-Ee-ccCCCeEEEEEecCC
Q psy14906 156 IMGKRWNSCVNVLEPSPVVDIIGVG----------LSNKKIILHNILTDE-------SLME-FI-QTWGPVTALSFRTDG 216 (583)
Q Consensus 156 ~~~~~~~~~i~~~~~s~~~~~l~~~----------~~d~~i~iw~~~~~~-------~~~~-~~-~~~~~v~~~~~~~~~ 216 (583)
.... +..+.++.+++.. ...+.|...++.++. .... +. .....+..+.+..+.
T Consensus 290 -----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 361 (711)
T 4hvt_A 290 -----SDAT---LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDR 361 (711)
T ss_dssp -----TTCE---EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSC
T ss_pred -----Ccce---EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCE
Confidence 1111 2233455554422 246789999987642 2222 32 223466778887653
Q ss_pred CCEEEEEcCCCc--EEEEeCCCCe-ehhh-hhhccccceEEEEEecCCCE-EEEEeC---CCeEEEEE
Q psy14906 217 PPMMVSGSNTGH--LTVWNLEDRQ-VENQ-IKKAHRKVVTGAHFLYNEPL-LVTSSP---DNTLKLWI 276 (583)
Q Consensus 217 ~~~l~s~~~dg~--i~vwd~~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~-l~s~~~---d~~i~~w~ 276 (583)
++++...++. +.++|+.+++ .... +.....+.+......+++.. +++.+. -+.+..++
T Consensus 362 --l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d 427 (711)
T 4hvt_A 362 --VFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWV 427 (711)
T ss_dssp --EEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred --EEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEe
Confidence 7888777765 6677776664 2222 21111245665666666653 333332 24455553
|
| >3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A* | Back alignment and structure |
|---|
Probab=81.32 E-value=33 Score=31.47 Aligned_cols=141 Identities=6% Similarity=0.080 Sum_probs=82.7
Q ss_pred CcEEEEEcCCC--cEEEEeeccCCceEEecccCCcceEEEeeC---CC----CCEEEEEe-cCCeEEEEEccCCceeEEE
Q psy14906 131 SNVKVWDIKAE--ETYLELSFDNDTFKIMGKRWNSCVNVLEPS---PV----VDIIGVGL-SNKKIILHNILTDESLMEF 200 (583)
Q Consensus 131 g~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s---~~----~~~l~~~~-~d~~i~iw~~~~~~~~~~~ 200 (583)
-.|.+||+.++ +.++++.+..... .....+..+++. |+ +.++..+. ..+-|.|+|+.+++.-+.+
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~-----~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLV-----EKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVT 197 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGC-----CCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ceEEEEECCCCCceeEEEEECCHHhc-----ccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEc
Confidence 47889999999 9999998764433 224567888877 22 23333332 4578999999988665544
Q ss_pred e--------------cc----CCCeEEEEEecC----CCCEEEEEcCCCcEEEEeCCC-----Ceehhhhh-hccc---c
Q psy14906 201 I--------------QT----WGPVTALSFRTD----GPPMMVSGSNTGHLTVWNLED-----RQVENQIK-KAHR---K 249 (583)
Q Consensus 201 ~--------------~~----~~~v~~~~~~~~----~~~~l~s~~~dg~i~vwd~~~-----~~~~~~~~-~~~~---~ 249 (583)
. +. ...+..|+++|+ ++ .|+-....+ -++|.+.+ ......+. .+.. .
T Consensus 198 ~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~-~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s 275 (381)
T 3q6k_A 198 HPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNR-PAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYN 275 (381)
T ss_dssp CGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCC-EEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTC
T ss_pred cCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCe-EEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCC
Confidence 2 00 146788889987 55 344333322 23333321 11111110 1222 2
Q ss_pred ceEEEEEe-cCCCEEEEEeCCCeEEEEEcc
Q psy14906 250 VVTGAHFL-YNEPLLVTSSPDNTLKLWIFD 278 (583)
Q Consensus 250 ~v~~~~~~-~~~~~l~s~~~d~~i~~w~~~ 278 (583)
.-..+++. .+|.++++--....|..|+.+
T Consensus 276 ~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~ 305 (381)
T 3q6k_A 276 DAIALAYDPKTKVIFFAEANTKQVSCWNTQ 305 (381)
T ss_dssp CEEEEEECTTTCEEEEEESSSSEEEEEETT
T ss_pred CcceEEEeCCCCeEEEEeccCCeEEEEeCC
Confidence 23345665 577777777788899999654
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=80.98 E-value=39 Score=32.11 Aligned_cols=112 Identities=9% Similarity=0.046 Sum_probs=59.4
Q ss_pred CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe---ehhh----hhhc----cccceEEEEEecC----CCEEEEEeC-
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ---VENQ----IKKA----HRKVVTGAHFLYN----EPLLVTSSP- 268 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~---~~~~----~~~~----~~~~v~~~~~~~~----~~~l~s~~~- 268 (583)
...+.|+|.|++...|+++...|.|++++..... .+.. +..+ .......|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 5668999999984224455568999999754321 1111 1011 1457889999996 444343322
Q ss_pred -C----------CeEEEEEccCCC------CCceeeEEec--cCCCCCeeEEEeeCCCCEEEEeeCCC
Q psy14906 269 -D----------NTLKLWIFDKAD------GNGRLLRIRE--GHSAPPNYIQFYGNSSDNILSAAGDS 317 (583)
Q Consensus 269 -d----------~~i~~w~~~~~~------~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg 317 (583)
+ ..|.-|.++... ...+.+..+. .....-..|.|.| |+.+.++.+..+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCC
Confidence 1 133335443211 0122332222 1122457899997 787666665533
|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
Probab=80.84 E-value=39 Score=32.08 Aligned_cols=28 Identities=14% Similarity=0.105 Sum_probs=21.2
Q ss_pred cceEEEEEecCCC-EEEEEeCCCeEEEEE
Q psy14906 249 KVVTGAHFLYNEP-LLVTSSPDNTLKLWI 276 (583)
Q Consensus 249 ~~v~~~~~~~~~~-~l~s~~~d~~i~~w~ 276 (583)
.....|+|.|+|. .|+.+...|.|++++
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~ 42 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILT 42 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEe
Confidence 3457899999996 455566789888884
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=80.24 E-value=29 Score=36.70 Aligned_cols=39 Identities=5% Similarity=0.022 Sum_probs=34.2
Q ss_pred cceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEe
Q psy14906 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI 201 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 201 (583)
..+.+++..++..++.+-+.|+++++|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 467788888899999999999999999999999888754
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 583 | ||||
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 4e-22 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-13 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 8e-13 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 7e-08 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-04 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 7e-20 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-10 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 5e-08 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 3e-05 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-19 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-05 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 7e-15 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 1e-09 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 3e-09 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 4e-06 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 2e-05 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 8e-15 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 1e-06 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-14 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 3e-05 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 3e-12 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 9e-05 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 3e-12 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 4e-05 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 2e-04 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 7e-12 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 2e-06 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 3e-04 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 1e-11 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 3e-08 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 8e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 3e-11 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 8e-09 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-05 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 9e-11 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 1e-06 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-10 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 1e-04 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-04 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-04 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 0.003 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 8e-10 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 4e-05 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 1e-08 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 1e-05 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 2e-07 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 3e-07 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 2e-05 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 3e-05 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 6e-05 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 5e-04 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 5e-04 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 1e-06 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 1e-06 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 1e-04 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 0.002 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 5e-06 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 6e-06 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 8e-04 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 2e-05 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 1e-04 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 7e-04 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 0.004 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 0.002 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 0.002 |
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 95.2 bits (235), Expect = 4e-22
Identities = 59/336 (17%), Positives = 110/336 (32%), Gaps = 24/336 (7%)
Query: 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296
R E HR VT F ++V++S D T+K+W ++ G R +GH+
Sbjct: 6 RPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE----TGDFERTLKGHTDS 61
Query: 297 PNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKF 356
I F + S + + +
Sbjct: 62 VQDISFD----------------HSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS 105
Query: 357 ILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT 416
+ + ++ +D V ++ ++ + + + A S
Sbjct: 106 SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQ 165
Query: 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476
V + H S A SY + G S ++S
Sbjct: 166 TVRVWVVATKECKAELREHRHVVECISWAPESSYSSIS---EATGSETKKSGKPGPFLLS 222
Query: 477 GGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTI 536
G D+T+K+W TG + + DN + H + C DD T+ + D
Sbjct: 223 GSRDKTIKMWDVS-TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 281
Query: 537 IRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
++ L+ H +T DF + +++T S+D T++VW+
Sbjct: 282 MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 69.4 bits (168), Expect = 2e-13
Identities = 42/232 (18%), Positives = 77/232 (33%), Gaps = 13/232 (5%)
Query: 55 FHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPV 114
+ + D + I + V T+ GH V
Sbjct: 87 DFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWV 146
Query: 115 HL--ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS--------- 163
+ G + S + V+VW + +E EL + + S
Sbjct: 147 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEAT 206
Query: 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG 223
+ + G +K I + ++ T LM + V + F + G ++S
Sbjct: 207 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK-FILSC 265
Query: 224 SNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275
++ L VW+ ++++ + AH VT F P +VT S D T+K+W
Sbjct: 266 ADDKTLRVWDYKNKRCMKTLN-AHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 67.5 bits (163), Expect = 8e-13
Identities = 47/311 (15%), Positives = 98/311 (31%), Gaps = 25/311 (8%)
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKN 332
K WI GH +P + F+ S ++SA+ D+T+++++ ++ +
Sbjct: 1 KEWIPR-----PPEKYALSGHRSPVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFERT 54
Query: 333 LGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSF 392
L + + ++ + + + + + F + ++ S
Sbjct: 55 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF-------QGFECIRTMHGHDHNVSSV 107
Query: 393 YKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGH 452
D + R K K T G+ Q G S +
Sbjct: 108 SIMPNGDHIVSASRDKTIKM----WEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSN 163
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ 512
D VR V + V+ + SI G ++ +
Sbjct: 164 D------QTVRVWVVATKECKAELREHRHVVECISWAPESSYS--SISEATGSETKKSGK 215
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
L D T+ + D+ T + L GH + F +++++ + D T+RVWD
Sbjct: 216 PGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWD 275
Query: 573 IPSSQLIDCFQ 583
+ + +
Sbjct: 276 YKNKRCMKTLN 286
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 52.1 bits (123), Expect = 7e-08
Identities = 55/283 (19%), Positives = 91/283 (32%), Gaps = 60/283 (21%)
Query: 97 WRRGIDIVGTYKGHTSPVHLIL--PFGPHLISVDEESNVKVWDIKAEETYLELS------ 148
W GH SPV ++ P ++S E++ +KVWD + + L
Sbjct: 3 WIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSV 62
Query: 149 -------------------------FDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN 183
F + V+ + P D I +
Sbjct: 63 QDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD 122
Query: 184 KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI 243
K I + + T + F V + DG ++ S SN + VW + ++ + ++
Sbjct: 123 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAEL 181
Query: 244 KKAHRKVVTGAHFLYNEPLLVTS--------------------SPDNTLKLWIFDKADGN 283
+ HR VV + S S D T+K+W
Sbjct: 182 -REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS----T 236
Query: 284 GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
G L GH + F+ ILS A D TLR+++ K+
Sbjct: 237 GMCLMTLVGHDNWVRGVLFHSG-GKFILSCADDKTLRVWDYKN 278
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 41.3 bits (95), Expect = 2e-04
Identities = 16/133 (12%), Positives = 41/133 (30%), Gaps = 6/133 (4%)
Query: 11 TSSNSSKIFLRHRALGYVSNHLPVVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSP 70
+ + +S + + L K ++ + L
Sbjct: 185 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV 244
Query: 71 QHEDDITCL--SSDFFHIYT-SANNIIYAWR-RGIDIVGTYKGHTSPVHLI--LPFGPHL 124
H++ + + S I + + + + W + + T H V + P++
Sbjct: 245 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV 304
Query: 125 ISVDEESNVKVWD 137
++ + VKVW+
Sbjct: 305 VTGSVDQTVKVWE 317
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 89.0 bits (219), Expect = 7e-20
Identities = 38/301 (12%), Positives = 93/301 (30%), Gaps = 19/301 (6%)
Query: 285 RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL-----GIASAN 339
R R GH A + + G S ++SA+ D L I+++ + + + +
Sbjct: 46 RTRRTLRGHLAKIYAMHW-GTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCA 104
Query: 340 RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399
++ + + + ++ + + S D
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT 164
Query: 400 MFLVPERCKQAKQSKP-------TCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGH 452
+ + + + + + + G ++++ G R ++
Sbjct: 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTF-- 222
Query: 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKV-WHFKQTGKPPLRSIKLDNGISFFRTH 511
GH + + +G +D T ++ + GI+
Sbjct: 223 ---TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFS 279
Query: 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571
+ +L DDF N+ D L+GH +++ + D + T S D +++W
Sbjct: 280 KSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Query: 572 D 572
+
Sbjct: 340 N 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 60.5 bits (145), Expect = 2e-10
Identities = 34/281 (12%), Positives = 76/281 (27%), Gaps = 9/281 (3%)
Query: 44 ETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDI 103
L ++ + P + + I
Sbjct: 68 RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTC--AYAPSGNYVACGGLDNICSIYN 125
Query: 104 VGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNS 163
+ T +G+ + +L + ++ + T +
Sbjct: 126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTG 185
Query: 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG 223
V L +P + G + L ++ F + A+ F +G +G
Sbjct: 186 DVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN-AFATG 244
Query: 224 SNTGHLTVWNLEDRQVENQIKKAHRKV-VTGAHFLYNEPLLVTSSPDNTLKLWIFDKADG 282
S+ +++L Q + +T F + LL+ D +W K
Sbjct: 245 SDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK--- 301
Query: 283 NGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
+ GH + + + + + + DS L+I+N
Sbjct: 302 -ADRAGVLAGHDNRVSCLGV-TDDGMAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 52.8 bits (125), Expect = 5e-08
Identities = 15/99 (15%), Positives = 34/99 (34%)
Query: 485 VWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
+TG+ + ++ + D + + D+ + +GH
Sbjct: 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHE 226
Query: 545 GQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
+ F P+ T S D T R++D+ + Q + +
Sbjct: 227 SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS 265
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 44.0 bits (102), Expect = 3e-05
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 509 RTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
+ ++++ + + V I + T R L GH+ ++ + DSR L++AS D +
Sbjct: 23 KACADATLSQITNNIDPVGRIQMRT---RRTLRGHLAKIYAMHWGTDSRLLVSASQDGKL 79
Query: 569 RVWDIPSSQLIDCFQ 583
+WD ++ +
Sbjct: 80 IIWDSYTTNKVHAIP 94
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 87.9 bits (216), Expect = 3e-19
Identities = 66/395 (16%), Positives = 109/395 (27%), Gaps = 45/395 (11%)
Query: 202 QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLE---DRQVENQIKKAHRKVVTGAHFLY 258
P L + P + + ++N + VE H VV F
Sbjct: 13 SKPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSN 72
Query: 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN-ILSAAGDS 317
+ L T + T +++ RL + P N SSD I S
Sbjct: 73 DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP 131
Query: 318 TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNI 377
+ A+ + L R +E IL Q + L +
Sbjct: 132 DGKFL-------------ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDK- 177
Query: 378 AAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVD 437
D + T G ++ G V
Sbjct: 178 -------LVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVR 230
Query: 438 RFNIQSGAHRGSYGHDNQP--GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP- 494
++ ++G +N+ GH V VV Q V+SG D++VK+W+ +
Sbjct: 231 VWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKS 290
Query: 495 ----------PLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
+ I + + T Q + D V D + + L GH
Sbjct: 291 DSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHR 350
Query: 545 GQLT------DADFSPDSRWLITASMDCTIRVWDI 573
+ + P+ T S DC R+W
Sbjct: 351 NSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.8 bits (104), Expect = 2e-05
Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 1/95 (1%)
Query: 397 MDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQ 455
E + V T ++L G V ++ +SG GH N
Sbjct: 293 KTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNS 352
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQ 490
V G + +G D ++W +K+
Sbjct: 353 VISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.7 bits (179), Expect = 7e-15
Identities = 53/353 (15%), Positives = 102/353 (28%), Gaps = 22/353 (6%)
Query: 232 WNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE 291
W + + +K V+T F +V+ S DNTLK+W G+ LR
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQF--CGNRIVSGSDDNTLKVWSAV----TGKCLRTLV 54
Query: 292 GHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEK 351
GH+ Q N + + + + + +++
Sbjct: 55 GHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGS 114
Query: 352 MNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAK 411
+ + + + + +V ++ +
Sbjct: 115 RDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ 174
Query: 412 QSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLN 471
+ G V+ G + +++++G + GH G+ +
Sbjct: 175 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL-----TGHQSLTSGMELKD-- 227
Query: 472 QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531
I++SG D TVK+W K + + + + DD TV + D+
Sbjct: 228 NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDL 287
Query: 532 DTCTIIRKL-----SGHMGQLTDADFSPDSRWLITASMDCT----IRVWDIPS 575
T IR L G G + S S + T + V D
Sbjct: 288 KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.9 bits (138), Expect = 1e-09
Identities = 63/398 (15%), Positives = 126/398 (31%), Gaps = 66/398 (16%)
Query: 97 WRRG-IDIVGTYKGHTSPVHLILPF-GPHLISVDEESNVKVWDIKAEETYLELSFDNDTF 154
WRRG + KGH V L F G ++S +++ +KVW + L
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG- 59
Query: 155 KIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRT 214
V + + +S + E+ +G + +
Sbjct: 60 ----------VWSSQMRD-----NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMH 104
Query: 215 DGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKL 274
+VSGS L VW++E Q + + V Y+ +V+ + D +K+
Sbjct: 105 LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR---CVQYDGRRVVSGAYDFMVKV 161
Query: 275 WIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLG 334
W + L +GH+ +QF G +++S + D+++R+++ ++
Sbjct: 162 WDPE----TETCLHTLQGHTNRVYSLQFDGI---HVVSGSLDTSIRVWDVETGN------ 208
Query: 335 IASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYK 394
S +NI + V +W
Sbjct: 209 ---------------CIHTLTGHQSLTSGMEL-------KDNILVSGNADSTVKIWDIKT 246
Query: 395 SKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDN 454
+ + + + + NFV+ G V +++++G +
Sbjct: 247 GQCLQT------LQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE 300
Query: 455 QPGHVGGVRGVVSDNLNQIVISGGNDQT----VKVWHF 488
G G V + + N + G + T + V F
Sbjct: 301 SGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.4 bits (134), Expect = 3e-09
Identities = 48/304 (15%), Positives = 96/304 (31%), Gaps = 12/304 (3%)
Query: 282 GNGRLLRIREGHSAPPNY-IQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANR 340
G + ++ +GH +QF GN I+S + D+TL++++ + + L +
Sbjct: 4 GELKSPKVLKGHDDHVITCLQFCGNR---IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV 60
Query: 341 NNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDM 400
+ + ++ + V G + + + + D
Sbjct: 61 WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRDAT 118
Query: 401 FLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVG 460
V + F ++ GH
Sbjct: 119 LRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 178
Query: 461 GVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVC 520
V + D V+SG D +++VW + + S ++L
Sbjct: 179 RVYSLQFDG--IHVVSGSLDTSIRVWDVETG-NCIHTLTGHQSLTSGMELK--DNILVSG 233
Query: 521 LDDFTVNIIDIDTCTIIRKLSGHMG-QLTDADFSPDSRWLITASMDCTIRVWDIPSSQLI 579
D TV I DI T ++ L G Q + ++IT+S D T+++WD+ + + I
Sbjct: 234 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFI 293
Query: 580 DCFQ 583
Sbjct: 294 RNLV 297
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.1 bits (110), Expect = 4e-06
Identities = 8/54 (14%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Query: 530 DIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
+ L GH + +++ S D T++VW + + +
Sbjct: 2 RRGELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV 54
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (103), Expect = 2e-05
Identities = 42/292 (14%), Positives = 97/292 (33%), Gaps = 36/292 (12%)
Query: 56 HVYGCNHFKLLSVSPQHEDDITCL--SSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSP 113
V+ K L H + + ++ + + + T GHTS
Sbjct: 40 KVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTST 99
Query: 114 VHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDND-------------------TF 154
V + ++S ++ ++VWDI+ + L
Sbjct: 100 VRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMV 159
Query: 155 KIMGKRWNSCVNVLEPSPVV--------DIIGVGLSNKKIILHNILTDESLMEFIQTWGP 206
K+ +C++ L+ + G + I + ++ T +
Sbjct: 160 KVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSL 219
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+ + + ++VSG+ + +W+++ Q ++ ++ +N+ ++TS
Sbjct: 220 TSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS 276
Query: 267 SPDNTLKLWIFDKADGNGRLLRIR-EGHSAPPNYIQFYGNSSDNILSAAGDS 317
S D T+KLW + L+ + G I+ S+ ++ A G
Sbjct: 277 SDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRA---SNTKLVCAVGSR 325
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 73.7 bits (179), Expect = 8e-15
Identities = 42/351 (11%), Positives = 99/351 (28%), Gaps = 43/351 (12%)
Query: 242 QIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ 301
QI++A + ++ + ++ LL+ +S D +L ++ FD N LL+ + P
Sbjct: 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQ-SLRYKHPLLCCN 63
Query: 302 FYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPV 361
F N+ I + + S +
Sbjct: 64 FIDNTDLQIYVGTVQGEILKVDLIGSPSFQA--------------------------LTN 97
Query: 362 SQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYIT 421
++ + G+ R + + I + + ++ D + V + K +
Sbjct: 98 NEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMD 157
Query: 422 HCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ 481
+ +++G ++ V F + + + + D
Sbjct: 158 TNSSRLIVGMNNSQVQWFRLPLCEDDNGT-IEESGLKYQIRDVALLPKEQEGYACSSIDG 216
Query: 482 TVKVWHFKQTGKP----------PLRSIKLDNGISFFRT----HQESSMLAVCLDDFTVN 527
V V F G R D +++ L D ++
Sbjct: 217 RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIIS 276
Query: 528 IIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQL 578
++ T I+ + + + + L A+ D T + +
Sbjct: 277 CWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNAAIDQTI 326
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.3 bits (113), Expect = 1e-06
Identities = 7/42 (16%), Positives = 15/42 (35%)
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577
I++ ++D P L+ S D ++ V+
Sbjct: 3 IVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA 44
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 72.6 bits (176), Expect = 2e-14
Identities = 41/379 (10%), Positives = 93/379 (24%), Gaps = 32/379 (8%)
Query: 206 PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK-KAHRKVVTGAHFLYNEPLLV 264
P++ ++ D + N + ++ + + K H VTG + + +V
Sbjct: 9 PISCHAWNKDRT-QIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIV 67
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
T D +W L+ +R +A
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPN----------------EKKFA 111
Query: 325 KSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGK 384
S N+ ++K +L + L + I +
Sbjct: 112 VGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 171
Query: 385 NKVSLWSFYKSKMDDMFLVPERCKQAKQ--SKPTCVYITHCGNFVLIGYSSGHVDRFNIQ 442
K + E ++ V + G+ V V +
Sbjct: 172 IKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 231
Query: 443 SGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD 502
+ + P V+ +++ G+D ++ + + L
Sbjct: 232 KKMAVATLASETLPLLA------VTFITESSLVAAGHDCFPVLFTYD-SAAGKLSFGGRL 284
Query: 503 NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW---- 558
+ ++ D + S H ++ +
Sbjct: 285 DVPKQSSQRGLTARERFQNLDKKASSEGSAAAGA-GLDSLHKNSVSQISVLSGGKAKCSQ 343
Query: 559 LITASMDCTIRVWDIPSSQ 577
T MD + +WD+ S +
Sbjct: 344 FCTTGMDGGMSIWDVRSLE 362
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 44.5 bits (103), Expect = 3e-05
Identities = 26/173 (15%), Positives = 48/173 (27%), Gaps = 8/173 (4%)
Query: 416 TCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI 475
+C + I ++ V + + H G V GV + ++
Sbjct: 11 SCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVH---ELKEHNGQVTGVDWAPDSNRIV 67
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNII-----D 530
+ G D+ VW K P I N + + V I +
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 127
Query: 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
D + D+ P+S L S D R++ ++ +
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPA 180
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.6 bits (158), Expect = 3e-12
Identities = 38/380 (10%), Positives = 79/380 (20%), Gaps = 53/380 (13%)
Query: 200 FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN 259
F G A SF M + R H +VV
Sbjct: 3 FQGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNP 62
Query: 260 EPLLVTSSPDNTLKLW-IFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDST 318
+ T +K+W I + + + L G+++
Sbjct: 63 TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKL--LPDGCTLIVGGEAS 119
Query: 319 LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIA 378
+ + + +++ F + +
Sbjct: 120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQF 179
Query: 379 AIHTGKNKVSLWSFYKSKM-----DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433
HT S +K+ D+ + + + + + G
Sbjct: 180 QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWL 239
Query: 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK 493
+ H H V + + +S G D + W
Sbjct: 240 AVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAW------- 292
Query: 494 PPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFS 553
I + + D S
Sbjct: 293 ------------------------------------RTPYGASIFQS-KESSSVLSCDIS 315
Query: 554 PDSRWLITASMDCTIRVWDI 573
D ++++T S D V+++
Sbjct: 316 VDDKYIVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.5 bits (98), Expect = 9e-05
Identities = 15/78 (19%), Positives = 22/78 (28%), Gaps = 3/78 (3%)
Query: 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL 257
+ V +L F G VS L W Q K V
Sbjct: 259 YQLHLHESCVLSLKFAYCGK-WFVSTGKDNLLNAWRTPYGASIFQSK--ESSSVLSCDIS 315
Query: 258 YNEPLLVTSSPDNTLKLW 275
++ +VT S D ++
Sbjct: 316 VDDKYIVTGSGDKKATVY 333
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 65.0 bits (156), Expect = 3e-12
Identities = 32/300 (10%), Positives = 85/300 (28%), Gaps = 22/300 (7%)
Query: 282 GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341
G+ +L+ GH+ + + ++S + D + +++ S + + I S + +
Sbjct: 1 GHDEVLKTISGHNKGITALTV-----NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNS 55
Query: 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401
+ + + + + +A + G V +
Sbjct: 56 KAQEYSSISWDDTLKVNGITKHEFG-----SQPKVASANNDGFTAVLTNDDDLLILQSFT 110
Query: 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG 461
++ + ++ N+V +G G+ + S
Sbjct: 111 ---GDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSY 167
Query: 462 VRGVVSDNLNQIVISGGNDQTVKVWHFKQ-------TGKPPLRSIKLDNGISFFRTHQES 514
+ S+ G + + E
Sbjct: 168 ISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEE 227
Query: 515 SMLAVCLDDFTVNIIDIDT-CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
++A D + I + II+ L+ H + + + S L+++ D I+ W++
Sbjct: 228 DLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 286
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.4 bits (100), Expect = 4e-05
Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
Query: 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL 257
+ I + ++ +GS ++ +++++ + AH+ V +
Sbjct: 208 INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWE 267
Query: 258 YNEPLLVTSSPDNTLKLW 275
LV+S D +K W
Sbjct: 268 -TPSTLVSSGADACIKRW 284
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 41.1 bits (94), Expect = 2e-04
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Query: 537 IRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577
++ +SGH +T +P LI+ S D I W S
Sbjct: 6 LKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH 42
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 64.8 bits (156), Expect = 7e-12
Identities = 19/319 (5%), Positives = 68/319 (21%), Gaps = 8/319 (2%)
Query: 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321
++ + + L + D + P + +L
Sbjct: 3 YILAPARPDKLVVI--DTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVK 60
Query: 322 FNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIH 381
+ + + + +++ + K + S L + A++
Sbjct: 61 IDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALY 120
Query: 382 -TGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFN 440
++ + + K + V G L+
Sbjct: 121 DAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGT--LVEDKPIQSWEAE 178
Query: 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK 500
+ + + ++ V + + +
Sbjct: 179 TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238
Query: 501 LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLI 560
+D + + + D++ I+++ + S D +
Sbjct: 239 MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVW 295
Query: 561 TASMDCTIRVWDIPSSQLI 579
+ +D + +
Sbjct: 296 LGGALGDLAAYDAETLEKK 314
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 47.9 bits (112), Expect = 2e-06
Identities = 27/347 (7%), Positives = 85/347 (24%), Gaps = 25/347 (7%)
Query: 220 MVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDK 279
+++ + L V + E V+ I P++ +P +
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVIT---------IADAGPTPMVPMVAPGGR-IAYATVN 53
Query: 280 ADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAN 339
+ + + G + + ++ AA + L
Sbjct: 54 KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113
Query: 340 RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399
+ + + + + LA +D + + + + + + +
Sbjct: 114 PTRVALYD--AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKP 171
Query: 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHV 459
+ G Y++ + G D + G +
Sbjct: 172 IQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231
Query: 460 GGVR-------GVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQ 512
+ + G ++ + ++ ++ + L +
Sbjct: 232 AMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEKNA--SIKRVPLPHSYYSVNVST 289
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKL----SGHMGQLTDADFSPD 555
+ S + + + D +T ++ + M + F+ D
Sbjct: 290 DGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTRD 336
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 40.9 bits (94), Expect = 3e-04
Identities = 23/301 (7%), Positives = 60/301 (19%), Gaps = 17/301 (5%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
G + + + L +L + R ++
Sbjct: 36 PMVPMVAPGGRIAYATVNKSESLVKIDLVTGETL------GRIDLSTPEERVKSLFGAAL 89
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
SPD ++ A + + +K
Sbjct: 90 SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKL 149
Query: 327 ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNK 386
++L + L ++ + P + K+
Sbjct: 150 YGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDI 209
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPT---CVYITHCGNFVLIGYSSGHVDRFNIQS 443
+ ++ + + ++ F+++
Sbjct: 210 DPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGAYNVLESFDLEK 269
Query: 444 GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN 503
A + V VS + V GG + + + T + + L
Sbjct: 270 NASIKRVPLPHSYYSV-----NVSTD-GSTVWLGGALGDLAAYDAE-TLE-KKGQVDLPG 321
Query: 504 G 504
Sbjct: 322 N 322
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 63.9 bits (153), Expect = 1e-11
Identities = 25/298 (8%), Positives = 76/298 (25%), Gaps = 8/298 (2%)
Query: 284 GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNL 343
G + ++R GH+ + + + SA + + ++ + SN+ A
Sbjct: 2 GSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINSWDISTGISNRVFPDVHATMITG 60
Query: 344 KRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLV 403
+ + + G + +A + + S
Sbjct: 61 IKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYK 120
Query: 404 PERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGG-- 461
+ + + V + + ++ S ++ +
Sbjct: 121 HIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPA 180
Query: 462 ---VRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLA 518
++ + ++ ++ LA
Sbjct: 181 EITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLA 240
Query: 519 VCLDDFTVNIIDIDT--CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574
D +V + +++ I H ++ + +++A D I+ W++P
Sbjct: 241 TGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 53.1 bits (125), Expect = 3e-08
Identities = 40/287 (13%), Positives = 76/287 (26%), Gaps = 9/287 (3%)
Query: 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV 264
+TALS DG + S GH+ W++ H ++TG L
Sbjct: 13 KAITALSSSADGK-TLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFT 71
Query: 265 TSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324
S D+ + + + + + + G+ + T
Sbjct: 72 VSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLT 131
Query: 325 KSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGK 384
+ S + +A +N + + L S A
Sbjct: 132 EVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNG 191
Query: 385 NKVSLWSFY-----KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRF 439
+ S ++ L +K CV + + G V +
Sbjct: 192 AFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW 251
Query: 440 NIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
N+ + + V V+ N ++S G D +K W
Sbjct: 252 NMNKPSDHPII--IKGAHAMSSVNSVIWLN-ETTIVSAGQDSNIKFW 295
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 51.9 bits (122), Expect = 8e-08
Identities = 13/49 (26%), Positives = 20/49 (40%)
Query: 535 TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
+I + GH +T S D + L +A + I WDI + F
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFP 51
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 62.8 bits (151), Expect = 3e-11
Identities = 18/326 (5%), Positives = 67/326 (20%), Gaps = 11/326 (3%)
Query: 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLR-IREGHSAPPNYIQFYGNSSDNILSAAGDS 317
++ ++ N L + D A + + + P ++ +
Sbjct: 7 GHEYMIVTNYPNNLHVV--DVA--SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYG 62
Query: 318 TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNN- 376
+ + + + + ++S + + + + L
Sbjct: 63 DIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPP 122
Query: 377 ---IAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433
+ + G + +F + + + G + +
Sbjct: 123 RLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLR 182
Query: 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK 493
+ + + Q + K
Sbjct: 183 NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKT 242
Query: 494 PPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFS 553
L + + + + D+ +I+ + F
Sbjct: 243 HTQEFADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLKQRKLIKAAN-LDHTYYCVAFD 300
Query: 554 PDSRWLITASMDCTIRVWDIPSSQLI 579
L + V++ + + +
Sbjct: 301 KKGDKLYLGGTFNDLAVFNPDTLEKV 326
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 55.1 bits (131), Expect = 8e-09
Identities = 34/350 (9%), Positives = 89/350 (25%), Gaps = 12/350 (3%)
Query: 210 LSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN-EPLLVTSSP 268
+ + M+ + +L V ++ V + A + V ++
Sbjct: 2 PALKAGHE-YMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 269 DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSET 328
+ D + F + + A + T R+ +
Sbjct: 61 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 120
Query: 329 SNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVS 388
+ ++A+ K + +++ + L + TGK V+
Sbjct: 121 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMR--AADDGSLYVAGPDIYKMDVKTGKYTVA 178
Query: 389 LWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS--SGHVDRFNIQSGAH 446
L ++ + + + F + + +
Sbjct: 179 LPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 238
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
G + + I G + + + K K +++ LD+
Sbjct: 239 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLN-RLAKYDLK-QRKL-IKAANLDHTYY 295
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKL---SGHMGQLTDADFS 553
++ L + + + + DT ++ + G M T F
Sbjct: 296 CVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTPQVFI 345
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 45.1 bits (105), Expect = 1e-05
Identities = 23/304 (7%), Positives = 70/304 (23%), Gaps = 17/304 (5%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA-----HRKVVTGAHFLYNEP 261
D V ++ G + +L+ + + + + +
Sbjct: 42 PGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGK 101
Query: 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321
+ + + + +G A P + +
Sbjct: 102 EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT---FPMPRQVYLMRAADDGSL 158
Query: 322 FNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIH 381
+ + ++ R + + +L S +
Sbjct: 159 YVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKD 218
Query: 382 TGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRFN 440
++ + Y D+ ++ Y + +++
Sbjct: 219 DKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYD 278
Query: 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK 500
++ + D+ V + GG + V++ T + +++IK
Sbjct: 279 LKQRKLIKAANLDHTYYCV-----AFDKK-GDKLYLGGTFNDLAVFNPD-TLE-KVKNIK 330
Query: 501 LDNG 504
L G
Sbjct: 331 LPGG 334
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 61.4 bits (147), Expect = 9e-11
Identities = 36/366 (9%), Positives = 72/366 (19%), Gaps = 46/366 (12%)
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
++ S G + ++ V +K + + + L I+D
Sbjct: 17 LIAFVSR-GQAFIQDVSGTYV---LKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYD 72
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASA 338
E + A
Sbjct: 73 ---YRTGKAEKFEENL--------------------------GNVFAMGVDRNGKFAVVA 103
Query: 339 NRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKS-KM 397
N LE I + IA K+ + ++ +
Sbjct: 104 NDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHV 163
Query: 398 DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQ-- 455
DM + S + +
Sbjct: 164 YDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVI 223
Query: 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKL------DNGISFFR 509
P G + +G D P + S
Sbjct: 224 PLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPV 283
Query: 510 THQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIR 569
+ ++ + + D+ T RK++ LTD S D + ++ D I
Sbjct: 284 HGEFAAYYQGAPEKGVLLKYDVKT----RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIY 339
Query: 570 VWDIPS 575
+ +
Sbjct: 340 TFPLEK 345
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 48.3 bits (113), Expect = 1e-06
Identities = 20/199 (10%), Positives = 42/199 (21%), Gaps = 7/199 (3%)
Query: 83 FFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEE 142
Y +Y T + +L + S D
Sbjct: 152 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLN 211
Query: 143 TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQ 202
E+ ++ N V K + I
Sbjct: 212 FSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIP 271
Query: 203 TWGPVTALSFRTDGPP--MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNE 260
+ S G G L ++++ R+V + +T +
Sbjct: 272 LESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT-----EVKNNLTDLRLSADR 326
Query: 261 PLLVTSSPDNTLKLWIFDK 279
++ D + + +K
Sbjct: 327 KTVMVRKDDGKIYTFPLEK 345
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.1 bits (141), Expect = 3e-10
Identities = 37/303 (12%), Positives = 91/303 (30%), Gaps = 30/303 (9%)
Query: 285 RLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL----GIASANR 340
+ + R S +Q+ I+S D+T++I++ + + L G +
Sbjct: 6 QRIHCRSETSKGVYCLQYDDQK---IVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQ 62
Query: 341 NNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDM 400
+ + + + + + V+ + DM
Sbjct: 63 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDM 122
Query: 401 FLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS--GHVDRFNIQSGAHRGSYGHDNQPGH 458
+ + + I +S + +N + + +
Sbjct: 123 ASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 182
Query: 459 VGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLA 518
R ++V+SG +D T+++W + + + ++ +
Sbjct: 183 CLQYRD-------RLVVSGSSDNTIRLWDIEC---GACLRVLEGHEELVRCIRFDNKRIV 232
Query: 519 VCLDDFTVNIIDIDTC---------TIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIR 569
D + + D+ +R L H G++ F D ++++S D TI
Sbjct: 233 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTIL 290
Query: 570 VWD 572
+WD
Sbjct: 291 IWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.8 bits (96), Expect = 1e-04
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Query: 479 NDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIR 538
D+++ VW LR + + + + + + D T+ + + TC +R
Sbjct: 113 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVR 172
Query: 539 KLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
L+GH + + R +++ S D TIR+WDI + +
Sbjct: 173 TLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGACLRVLE 215
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.6 bits (93), Expect = 3e-04
Identities = 6/32 (18%), Positives = 14/32 (43%)
Query: 552 FSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
D + +++ D TI++WD + +
Sbjct: 21 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILT 52
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.6 bits (93), Expect = 3e-04
Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 26/189 (13%)
Query: 95 YAWRRGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTF 154
A I + GH + V+++ +++S + +KVW+ T
Sbjct: 122 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNT-------------STC 168
Query: 155 KIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRT 214
+ + + ++ G S+ I L +I L V
Sbjct: 169 EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR---CIR 225
Query: 215 DGPPMMVSGSNTGHLTVWNLEDRQVENQIK--------KAHRKVVTGAHFLYNEPLLVTS 266
+VSG+ G + VW+L H V F +E +V+S
Sbjct: 226 FDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSS 283
Query: 267 SPDNTLKLW 275
S D+T+ +W
Sbjct: 284 SHDDTILIW 292
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.5 bits (85), Expect = 0.003
Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT 535
S D+T+KVW+ T + GI+ + ++ D T+ + DI+
Sbjct: 153 SASGDRTIKVWNT-STCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA 209
Query: 536 IIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQ 577
+R L GH D++ +++ + D I+VWD+ ++
Sbjct: 210 CLRVLEGHEE--LVRCIRFDNKRIVSGAYDGKIKVWDLVAAL 249
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 58.5 bits (140), Expect = 8e-10
Identities = 20/334 (5%), Positives = 60/334 (17%), Gaps = 39/334 (11%)
Query: 264 VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPP-------NYIQFYGNSSDNILSAAGD 316
+ + T + W+ G L G + S
Sbjct: 38 LPAYFAGTTENWVSCAG--CGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRT 95
Query: 317 STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNN 376
+ +F+ + +E + G
Sbjct: 96 DYVEVFDPVT----------------FLPIADIELPDAPRFSVGPRVHIIGNCASSAC-- 137
Query: 377 IAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHV 436
+ G + + S + D + + T + + ++
Sbjct: 138 LLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPA 197
Query: 437 DRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPL 496
+ + V + + +
Sbjct: 198 AAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRK 257
Query: 497 RSIKLDNGISFFRTHQESSMLAVCLDDF---------TVNIIDIDTCTIIRKLSGHMGQL 547
G + + + + + + + +S
Sbjct: 258 ADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-HDS 316
Query: 548 TDADFSPDSRWLI--TASMDCTIRVWDIPSSQLI 579
+ D ++ + ++D S Q
Sbjct: 317 DAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQ 350
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 43.8 bits (102), Expect = 4e-05
Identities = 22/304 (7%), Positives = 69/304 (22%), Gaps = 33/304 (10%)
Query: 210 LSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHF-------LYNEPL 262
+ + G T ++ V++ I+ + + L
Sbjct: 79 FALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACL 138
Query: 263 LVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF 322
L + ++ + S + ++ + ++L
Sbjct: 139 LFFLFGSSAAAGL--SVPG--ASDDQLTKSASCFH----IHPGAAATHYLGSCPASLAAS 190
Query: 323 NTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDW--NNIAAI 380
+ + + + A + ++ + D
Sbjct: 191 DLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWA----VASSILQGDIPAAGATMK 246
Query: 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFN 440
S + +V AK + I + ++ +
Sbjct: 247 AAIDGNESGRKADNFRSAGFQMV------AKLKNTDGIMILTVEHSRSCLAAAENTSSVT 300
Query: 441 IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK 500
G G + + + D + + + + ++ + + S++
Sbjct: 301 ASVGQTSGPISNGHDSDAI----IAAQDGASDNYANSAGTEVLDIYDAA-SDQ-DQSSVE 354
Query: 501 LDNG 504
LD G
Sbjct: 355 LDKG 358
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 54.9 bits (130), Expect = 1e-08
Identities = 37/361 (10%), Positives = 80/361 (22%), Gaps = 59/361 (16%)
Query: 242 QIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREG--------H 293
KAH + V+ S D LK+W D + H
Sbjct: 8 NAGKAHDADIFSVSA--CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHH 65
Query: 294 SAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353
I+ + + + L + E K + +L+ ++
Sbjct: 66 VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKV-----------IFEKLDLLD 114
Query: 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCK----- 408
+G + ++ ++ K +W F+ + L
Sbjct: 115 SDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQ 174
Query: 409 ------QAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGV 462
T V I+ G + + + +
Sbjct: 175 GTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI 234
Query: 463 RGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLD 522
R V ++ + + +T +
Sbjct: 235 RSVKFSPQGSLLAIAHDSNSFGCITLYETE---------------------------FGE 267
Query: 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
+ + H + F+ L +A D +R WD+ + + I
Sbjct: 268 RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTL 327
Query: 583 Q 583
Sbjct: 328 N 328
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.2 bits (105), Expect = 1e-05
Identities = 43/422 (10%), Positives = 102/422 (24%), Gaps = 46/422 (10%)
Query: 101 IDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTF--KIMG 158
I K H + + + +S + +KVWD K + F K
Sbjct: 4 IATANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGL 63
Query: 159 KRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPP 218
+ + + + ++ + ++ + I ++ + I + +
Sbjct: 64 HHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKH--- 120
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFD 278
+ W L+ +++ HR V T + ++ +
Sbjct: 121 -----------SFWALKWGASNDRLLS-HRLVATDVKGTTYIWKFHPFADESNSLTLNWS 168
Query: 279 KADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL-SAAGDSTLRIFNTKSETSNKNLGIAS 337
+ S + S ++ + + T++I +
Sbjct: 169 PTLELQGTVESPMTPSQFATSVDI---SERGLIATGFNNGTVQISELSTL---------- 215
Query: 338 ANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKM 397
N I L +N T +
Sbjct: 216 -RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSV 274
Query: 398 DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY-GHDNQP 456
+ A S + G + G + +++++ + H +
Sbjct: 275 PTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDI 334
Query: 457 GHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPP--------LRSIKLDNGISFF 508
+ D + G V K+ + L + LD I +F
Sbjct: 335 EIE--EDILAVDEHGDSLAEPG---VFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF 389
Query: 509 RT 510
R
Sbjct: 390 RE 391
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 51.1 bits (120), Expect = 2e-07
Identities = 34/331 (10%), Positives = 93/331 (28%), Gaps = 25/331 (7%)
Query: 247 HRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306
R T + + + + D +++ S+ ++F
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK 75
Query: 307 SDNIL-SAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFS 365
L S + ++ + + ++ ++N K ++
Sbjct: 76 GSQYLCSGDESGKVIVWGWTFDKESNSV-----------------EVNVKSEFQVLAGPI 118
Query: 366 FGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGN 425
++ + + + + G++ ++ + S + + + +
Sbjct: 119 SDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRI----NACHLKQSRPMR 174
Query: 426 FVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKV 485
+ +G V H Q V V I + +
Sbjct: 175 SMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD 234
Query: 486 WHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMG 545
+ K + G F + +S A D T+ + D+ T ++K +
Sbjct: 235 GKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQ 294
Query: 546 QLTDADFS---PDSRWLITASMDCTIRVWDI 573
QL + + +I+ S+D T+ +++
Sbjct: 295 QLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.3 bits (118), Expect = 3e-07
Identities = 36/368 (9%), Positives = 100/368 (27%), Gaps = 32/368 (8%)
Query: 207 VTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266
+T L F + +++G++ + V++ +++ Q+ H V + + L+ S
Sbjct: 16 ITCLQFEDN---YVITGADDKMIRVYDSINKKFLLQLS-GHDGGVWALKYAHGGILVSGS 71
Query: 267 SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKS 326
+ I + +S + I++ + D+TL ++
Sbjct: 72 TDRTVRVWDIKKGCCTH----VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPK 127
Query: 327 ETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNK 386
E+S + G E+ P V
Sbjct: 128 ESSVPDHG-------------------EEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS 168
Query: 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH 446
D+ +V + + + +
Sbjct: 169 GHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIW 228
Query: 447 RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGIS 506
G + ++ ++S D +++ W + + I+
Sbjct: 229 DLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAIT 288
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRK-LSGHMGQLTDADFSPDSRWLITASMD 565
F + ++L ++ NI ++ + ++ + Q+ +F + + D
Sbjct: 289 TF--YVSDNILVSGSEN-QFNIYNLRSGKLVHANILKDADQIWSVNFKGKTL-VAAVEKD 344
Query: 566 CTIRVWDI 573
+ +
Sbjct: 345 GQSFLEIL 352
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.5 bits (103), Expect = 2e-05
Identities = 37/338 (10%), Positives = 98/338 (28%), Gaps = 27/338 (7%)
Query: 245 KAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYG 304
+ H V + + ++T + D ++++ N + L GH +++
Sbjct: 9 RGHMTSVITC-LQFEDNYVITGADDKMIRVYDSI----NKKFLLQLSGHDGGVWALKY-- 61
Query: 305 NSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQF 364
+ IL + + + + L+ + K I V+
Sbjct: 62 -AHGGILVSGSTDRTVRVWDIKKGCCTH-----VFEGHNSTVRCLDIVEYKNIKYIVTGS 115
Query: 365 SFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCG 424
+++ + + + ++ + V + ++ G
Sbjct: 116 RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR----GHMASVRTVSGHG 171
Query: 425 NFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVK 484
N V+ G + +++ + + D+ + IS D T++
Sbjct: 172 NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYS-----TIYDHERKRCISASMDTTIR 226
Query: 485 VWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM 544
+W + G + S + +I D RK S H
Sbjct: 227 IWDLENGELMYTL-----QGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHH 281
Query: 545 GQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582
L+ S ++ + + ++++ S +L+
Sbjct: 282 TNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHAN 319
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 44.1 bits (102), Expect = 3e-05
Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Query: 198 MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL 257
+F ++A++ ++VSGS ++NL ++ + + +F
Sbjct: 275 RKFSYHHTNLSAITTFYVSDNILVSGSE-NQFNIYNLRSGKLVHANILKDADQIWSVNFK 333
Query: 258 YNEPLLVTSSPDNTLKLWIFD 278
L+ D L I D
Sbjct: 334 GKT-LVAAVEKDGQSFLEILD 353
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.0 bits (99), Expect = 6e-05
Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Query: 540 LSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
L GHM + + ++IT + D IRV+D + + +
Sbjct: 8 LRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLS 50
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.3 bits (92), Expect = 5e-04
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 513 ESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572
E + + DD + + D + +LSGH G + ++ L++ S D T+RVWD
Sbjct: 22 EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWD 80
Query: 573 IPSSQLIDCFQ 583
I F+
Sbjct: 81 IKKGCCTHVFE 91
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.3 bits (92), Expect = 5e-04
Identities = 52/350 (14%), Positives = 115/350 (32%), Gaps = 37/350 (10%)
Query: 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221
S + L+ + + G +K I +++ + + L++ G V AL + G ++V
Sbjct: 13 TSVITCLQFED--NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG--ILV 68
Query: 222 SGSNTGHLTVWNLEDRQVENQIKKAHR-KVVTGAHFLYNEPLLVTSSPDNTLKLW----- 275
SGS + VW+++ + + + N +VT S DNTL +W
Sbjct: 69 SGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKE 128
Query: 276 --------------IFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321
+F + N + + GH A + +GN ++S + D+TL +
Sbjct: 129 SSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGN---IVVSGSYDNTLIV 185
Query: 322 FNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIH 381
++ L + + + ++ + + +
Sbjct: 186 WDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL 245
Query: 382 TGKNKVSLWSFYKSKMDDMF-----LVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHV 436
G ++S + D R + + + + + +L+ S
Sbjct: 246 VGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQF 305
Query: 437 DRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
+ +N++SG H N + V +V + D +
Sbjct: 306 NIYNLRSGKLV----HANILKDADQIWSVNFKG-KTLVAAVEKDGQSFLE 350
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 48.4 bits (113), Expect = 1e-06
Identities = 25/309 (8%), Positives = 63/309 (20%), Gaps = 33/309 (10%)
Query: 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTK 325
++ + I HS + S S +RI++T
Sbjct: 34 YCNGTSVYTVPVG----SLTDTEIYTEHSHQTTVAKTS-PSGYYCASGDVHGNVRIWDTT 88
Query: 326 SETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKN 385
T F P ++ G
Sbjct: 89 QTTHILK------------------TTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 130
Query: 386 KVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGA 445
+ + S + + I+ + + + +
Sbjct: 131 FL--FDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEH 188
Query: 446 HRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGI 505
+ + P + G V + +
Sbjct: 189 TKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS-------GSV 241
Query: 506 SFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMG-QLTDADFSPDSRWLITASM 564
+ + +A D T+ I ++ T + + + + + L++ S
Sbjct: 242 FGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISA 301
Query: 565 DCTIRVWDI 573
+ I +
Sbjct: 302 NGFINFVNP 310
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 48.4 bits (113), Expect = 1e-06
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Query: 514 SSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573
+ C +V + + + T + H Q T A SP + + + +R+WD
Sbjct: 29 GDKIQYCNGT-SVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDT 87
Query: 574 PSSQLIDCFQ 583
+ I
Sbjct: 88 TQTTHILKTT 97
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 41.8 bits (96), Expect = 1e-04
Identities = 31/291 (10%), Positives = 72/291 (24%), Gaps = 23/291 (7%)
Query: 45 TLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCL--SSDFFHIYTSANN----IIYAWR 98
C G + + + +H T S ++ + + I +
Sbjct: 30 DKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQ 89
Query: 99 RGIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMG 158
+ T + PV I + E FD T
Sbjct: 90 TTHILKTTIPVFSGPVKDISWDSES-------KRIAAVGEGRERFGHVFLFDTGTSNGNL 142
Query: 159 KRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPP 218
+N ++ P + S+ +
Sbjct: 143 TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS 202
Query: 219 MMVSGSNTGHLTVWNLEDRQVENQIKKA------HRKVVTGAHFLYNEPLLVTSSPDNTL 272
+ S G + ++N D + H V G + + + ++S D T+
Sbjct: 203 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTI 262
Query: 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFN 323
K+W ++ + + + + ++S + + + N
Sbjct: 263 KIWNVA----TLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVN 309
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 38.3 bits (87), Expect = 0.002
Identities = 12/50 (24%), Positives = 23/50 (46%)
Query: 534 CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCFQ 583
K H G + +SPD + +AS D TI++W++ + ++
Sbjct: 228 EDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIP 277
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 46.7 bits (110), Expect = 5e-06
Identities = 17/118 (14%), Positives = 34/118 (28%), Gaps = 8/118 (6%)
Query: 468 DNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVN 527
D N ++ + + + T + + + R L V D VN
Sbjct: 29 DLENLFSVTLRDAGQIALIDGS-TYEI-KTVLDTGYAVHISRLSASGRYLFVIGRDGKVN 86
Query: 528 IIDIDTCTI-----IRKLSGHMGQLTDADFSPDSRWLI-TASMDCTIRVWDIPSSQLI 579
+ID+ I+ S T + ++ I A + D + +
Sbjct: 87 MIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK 144
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 46.3 bits (108), Expect = 6e-06
Identities = 40/344 (11%), Positives = 90/344 (26%), Gaps = 31/344 (9%)
Query: 259 NEPL-LVTSSPDNTLKLWIFDKADGN------------GRLLRIREGHSAPP-------N 298
+EP L +PD ++++ D A GR++ + +G P +
Sbjct: 1 DEPRILEAPAPDAR-RVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGS 59
Query: 299 YIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFIL 358
+I I + +F+ + ++ + A R + + L
Sbjct: 60 FIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWM------TSL 113
Query: 359 PPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCV 418
P + GK + + V
Sbjct: 114 TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKV 173
Query: 419 YITHCGNFVLIGYSSGHVDRFN-IQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISG 477
G + H + I A+ G P + G + + + + +
Sbjct: 174 AFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPA 233
Query: 478 GNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTII 537
T + + + V ++D T +
Sbjct: 234 VEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL 293
Query: 538 RKLSGHMGQLTDADFSPDSRWLI--TASMDCTIRVWDIPSSQLI 579
K ++ + S D + L+ ++ D T+ + D S + +
Sbjct: 294 AKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL 336
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 39.4 bits (90), Expect = 8e-04
Identities = 46/359 (12%), Positives = 91/359 (25%), Gaps = 38/359 (10%)
Query: 205 GPVTALSFRTDGPPMMVS----GSNTGHLTVWNLEDRQVENQIKKAHRKVVT---GAHFL 257
P + D + V+ + V + E +V I F+
Sbjct: 2 EPRILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFI 61
Query: 258 Y----NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSA 313
+ + ++++ D P G
Sbjct: 62 AHASTVFSRIARGERTDYVEVF--DPVTL-----LPTADIELPDAPRFLVGTYPWMTSLT 114
Query: 314 AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKD 373
TL + + + + KR + F P + F +D
Sbjct: 115 PDGKTLLFYQFSPAPAVGVVDLEG---KAFKRMLDVPDCYHIFPTAPDTFFMHC----RD 167
Query: 374 WNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433
+ + + +D FL+ K V+ T+ G I SS
Sbjct: 168 GSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG--RLVWPTYTGKIHQIDLSS 225
Query: 434 GHVDRFNIQSGAHRGSYGHDNQP-------GHVGGVRGVVSDNLNQIVISGGNDQTVKVW 486
G +P H R + + + V V
Sbjct: 226 GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL 285
Query: 487 HFKQTGKPPLRSIKLDNGISF--FRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGH 543
K TG+ L ++ + I ++ + A+ D T+ I D ++ +R ++
Sbjct: 286 DAK-TGER-LAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 342
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 44.9 bits (105), Expect = 2e-05
Identities = 12/70 (17%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 510 THQESSMLAVCL-DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTI 568
++ +V L D + ++D D+ I++ + + + S R+L+ D I
Sbjct: 27 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARI 85
Query: 569 RVWDIPSSQL 578
+ D+ + +
Sbjct: 86 DMIDLWAKEP 95
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 42.2 bits (97), Expect = 1e-04
Identities = 8/63 (12%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 522 DDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPD-SRWLITASMDCTIRVWDIPSSQLID 580
+ +++ID+ + + + A SPD ++ + + + + D ++ +I
Sbjct: 10 ESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIA 68
Query: 581 CFQ 583
Sbjct: 69 TVP 71
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 39.5 bits (90), Expect = 7e-04
Identities = 22/274 (8%), Positives = 63/274 (22%), Gaps = 3/274 (1%)
Query: 221 VSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKA 280
++ S + +++V ++ +V I + + V ++ N + +
Sbjct: 6 IANSESDNISVIDVTSNKVTATIP-VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 281 DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANR 340
+ + + ++ S + A
Sbjct: 65 NVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALS 124
Query: 341 NNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDM 400
+ K+ ++ + + + T + + S +
Sbjct: 125 PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISV 184
Query: 401 FLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVG 460
Y + FN S G+ +
Sbjct: 185 IDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP 244
Query: 461 GVRGV-VSDNLNQIVISGGNDQTVKVWHFKQTGK 493
G+ V+ + ++ ++ TV V T
Sbjct: 245 DPAGIAVTPDGKKVYVALSFCNTVSVIDTA-TNT 277
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 37.2 bits (84), Expect = 0.004
Identities = 13/78 (16%), Positives = 28/78 (35%), Gaps = 2/78 (2%)
Query: 507 FFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWL-ITASMD 565
++ + V TV++ID T I ++ +PD + + + S
Sbjct: 207 VNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFC 265
Query: 566 CTIRVWDIPSSQLIDCFQ 583
T+ V D ++ +
Sbjct: 266 NTVSVIDTATNTITATMA 283
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 38.3 bits (87), Expect = 0.002
Identities = 14/104 (13%), Positives = 30/104 (28%), Gaps = 5/104 (4%)
Query: 473 IVISGGNDQTVKVWHFKQTGKP-PLRSIKLDNGISFFRTHQESSMLAVCL-DDFTVNIID 530
+ I+ Q + VW+ G + + + + + L V + +F V
Sbjct: 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65
Query: 531 IDTCTIIRKLSGHM---GQLTDADFSPDSRWLITASMDCTIRVW 571
I + G LT +++ S +
Sbjct: 66 IAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSV 109
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 37.9 bits (86), Expect = 0.002
Identities = 30/320 (9%), Positives = 73/320 (22%), Gaps = 22/320 (6%)
Query: 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDST 318
+ + + S + +W + +G L ++ + + + +
Sbjct: 3 KQTVYIASPESQQIHVWNLN-HEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFR 60
Query: 319 LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIA 378
+ + + ++ L QF F + ++
Sbjct: 61 VLAYRIAPDD----------GALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVT 110
Query: 379 AIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDR 438
+ G + + + I +
Sbjct: 111 RLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAE 170
Query: 439 FNIQSGAH-RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLR 497
GA R H N+ S ++ ++ GN + V+ R
Sbjct: 171 VTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTR 230
Query: 498 SIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHM---GQLTDADFSP 554
T + A + + + + G Q +
Sbjct: 231 -----WAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDH 285
Query: 555 DSRWLITASMDC-TIRVWDI 573
++LI A I V++I
Sbjct: 286 SGKYLIAAGQKSHHISVYEI 305
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 583 | |||
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 100.0 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 100.0 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 100.0 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 100.0 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 100.0 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 100.0 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 100.0 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 100.0 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.97 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.97 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.96 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.95 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.95 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.95 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.95 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.94 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.92 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.91 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.88 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.87 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.87 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.86 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.83 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.77 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.77 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.74 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.71 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.68 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.45 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 99.33 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 99.31 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 99.29 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.27 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 99.26 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.26 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.25 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 99.24 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 99.23 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 99.22 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 99.18 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 99.16 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 99.16 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 99.09 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 99.02 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.69 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.67 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.64 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 98.57 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 98.56 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 98.52 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 98.46 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 98.45 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 98.39 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 98.31 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 98.25 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 98.22 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 98.22 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 98.21 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 98.17 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 98.16 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 98.16 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 98.11 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 97.92 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 97.86 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 97.76 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.73 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 97.69 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 97.6 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 97.38 | |
| d1qfma1 | 430 | Prolyl oligopeptidase, N-terminal domain {Pig (Sus | 97.21 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 97.1 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 97.07 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 95.47 | |
| d1jtdb_ | 273 | beta-lactamase inhibitor protein-II, BLIP-II {Stre | 95.23 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 95.06 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 95.03 | |
| d2hu7a1 | 313 | Acylamino-acid-releasing enzyme, N-terminal donain | 94.96 | |
| d1jtdb_ | 273 | beta-lactamase inhibitor protein-II, BLIP-II {Stre | 94.39 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 94.25 | |
| d1crua_ | 450 | Soluble quinoprotein glucose dehydrogenase {Acinet | 92.2 | |
| d1v04a_ | 340 | Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory | 91.52 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 90.92 | |
| d2hu7a1 | 313 | Acylamino-acid-releasing enzyme, N-terminal donain | 86.04 |
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.8e-44 Score=332.71 Aligned_cols=318 Identities=12% Similarity=0.173 Sum_probs=261.2
Q ss_pred EEEeeCCCCCEEEEEecCCeEEEEE-ccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhh-
Q psy14906 166 NVLEPSPVVDIIGVGLSNKKIILHN-ILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI- 243 (583)
Q Consensus 166 ~~~~~s~~~~~l~~~~~d~~i~iw~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~- 243 (583)
..+..+++|+..........+..-. .+..+.+..+ .|...|.+++|+|+|+ +|++|+ ||.|+|||+.++.....+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~H~~~V~~v~fs~~g~-~latg~-dg~V~iWd~~~~~~~~~~~ 89 (337)
T d1gxra_ 13 YSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL-NHGEVVCAVTISNPTR-HVYTGG-KGCVKVWDISHPGNKSPVS 89 (337)
T ss_dssp CEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEE-CCSSCCCEEEECSSSS-EEEEEC-BSEEEEEETTSTTCCSCSE
T ss_pred ccccCCCCCCEEeeccCCcceecCCCCCCceEEEEC-CCCCcEEEEEECCCCC-EEEEEE-CCEEEEEEccCCcccceeE
Confidence 3455566665544433322211000 0112334444 6889999999999999 899987 799999999865432221
Q ss_pred ---hhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEE
Q psy14906 244 ---KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLR 320 (583)
Q Consensus 244 ---~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 320 (583)
..+|.+.|.+++|+|++++|++++.|+.|++||+... ..+....+..|...+..++|+| ++..+++++.|+.++
T Consensus 90 ~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~ 166 (337)
T d1gxra_ 90 QLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP--TPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIA 166 (337)
T ss_dssp EEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC----EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEE
T ss_pred EeeecCCCCcEEEEEEcCCCCEEEEeeccccccccccccc--cccccccccccccccccccccc-ccccccccccccccc
Confidence 1468899999999999999999999999999976543 5566778888999999999997 899999999999999
Q ss_pred EEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccce
Q psy14906 321 IFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDM 400 (583)
Q Consensus 321 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 400 (583)
+|++.+++.....
T Consensus 167 ~~~~~~~~~~~~~------------------------------------------------------------------- 179 (337)
T d1gxra_ 167 VWDLHNQTLVRQF------------------------------------------------------------------- 179 (337)
T ss_dssp EEETTTTEEEEEE-------------------------------------------------------------------
T ss_pred ccccccccccccc-------------------------------------------------------------------
Confidence 9999876543321
Q ss_pred eeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecC
Q psy14906 401 FLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGND 480 (583)
Q Consensus 401 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 480 (583)
..+...+.+++|++++..+++++.||.+++||+++++.+..+ .|...|.+++|+|++++|++++.|
T Consensus 180 --------~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~------~~~~~i~~l~~~~~~~~l~~~~~d 245 (337)
T d1gxra_ 180 --------QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQH------DFTSQIFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp --------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE------ECSSCEEEEEECTTSSEEEEEETT
T ss_pred --------cccccccccccccccccccccccccccccccccccceeeccc------ccccceEEEEEcccccccceeccc
Confidence 111257899999999999999999999999999999887775 688899999999999999999999
Q ss_pred CcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEE
Q psy14906 481 QTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLI 560 (583)
Q Consensus 481 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~ 560 (583)
+.+++||+... .......+...|.+++|+|++++|++++.||.|++||+.+++.+..+. |...|.+++|+||+++|+
T Consensus 246 ~~i~i~d~~~~--~~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~ 322 (337)
T d1gxra_ 246 SNVEVLHVNKP--DKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIV 322 (337)
T ss_dssp SCEEEEETTSS--CEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEE
T ss_pred ccccccccccc--ccccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEcc-CCCCEEEEEEeCCCCEEE
Confidence 99999999988 777777788899999999999999999999999999999999988766 788999999999999999
Q ss_pred EEeCCCeEEEEeC
Q psy14906 561 TASMDCTIRVWDI 573 (583)
Q Consensus 561 s~~~d~~i~vw~~ 573 (583)
+++.|++|+|||+
T Consensus 323 t~s~D~~I~vWdl 335 (337)
T d1gxra_ 323 TGSGDKKATVYEV 335 (337)
T ss_dssp EEETTSCEEEEEE
T ss_pred EEeCCCeEEEEEE
Confidence 9999999999997
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-43 Score=328.39 Aligned_cols=280 Identities=12% Similarity=0.215 Sum_probs=247.7
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCce---eE--EEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDES---LM--EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNL 234 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~---~~--~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~ 234 (583)
.|...|.+++|+|+|++||+|+ ||.|+|||+.+++. +. ...+|.+.|.+++|+|+++ +|++++.||.|++||+
T Consensus 49 ~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~-~l~s~~~dg~i~iwd~ 126 (337)
T d1gxra_ 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC-TLIVGGEASTLSIWDL 126 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS-EEEEEESSSEEEEEEC
T ss_pred CCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCC-EEEEeecccccccccc
Confidence 7899999999999999999987 78999999976532 22 2347888999999999998 8999999999999998
Q ss_pred CCC--eehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEE
Q psy14906 235 EDR--QVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILS 312 (583)
Q Consensus 235 ~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 312 (583)
... +....+ ..|...+..++|+|++.++++++.|+.+++|++. ..+......+|...+.+++|++ ++..+++
T Consensus 127 ~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~----~~~~~~~~~~~~~~v~~l~~s~-~~~~~~~ 200 (337)
T d1gxra_ 127 AAPTPRIKAEL-TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH----NQTLVRQFQGHTDGASCIDISN-DGTKLWT 200 (337)
T ss_dssp CCC--EEEEEE-ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECT-TSSEEEE
T ss_pred ccccccccccc-cccccccccccccccccccccccccccccccccc----cccccccccccccccccccccc-ccccccc
Confidence 754 445555 6789999999999999999999999999999765 4577788889999999999997 7899999
Q ss_pred eeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeec
Q psy14906 313 AAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSF 392 (583)
Q Consensus 313 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 392 (583)
++.|+.+++||+++++.+..+..
T Consensus 201 ~~~d~~v~i~d~~~~~~~~~~~~--------------------------------------------------------- 223 (337)
T d1gxra_ 201 GGLDNTVRSWDLREGRQLQQHDF--------------------------------------------------------- 223 (337)
T ss_dssp EETTSEEEEEETTTTEEEEEEEC---------------------------------------------------------
T ss_pred ccccccccccccccceeeccccc---------------------------------------------------------
Confidence 99999999999987764433211
Q ss_pred CcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc
Q psy14906 393 YKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ 472 (583)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 472 (583)
...+.+++|+|+++++++++.+|.+++||+.+++.... ..|...|++++|+|+++
T Consensus 224 -------------------~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~------~~~~~~i~~v~~s~~g~ 278 (337)
T d1gxra_ 224 -------------------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL------HLHESCVLSLKFAYCGK 278 (337)
T ss_dssp -------------------SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE------CCCSSCEEEEEECTTSS
T ss_pred -------------------ccceEEEEEcccccccceeccccccccccccccccccc------cccccccceEEECCCCC
Confidence 15689999999999999999999999999998887654 48999999999999999
Q ss_pred EEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEc
Q psy14906 473 IVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531 (583)
Q Consensus 473 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 531 (583)
+|++++.||.|++||+.++ +.+....+...|.+++|+|++++|++|+.||+|+|||+
T Consensus 279 ~l~s~s~Dg~i~iwd~~~~--~~~~~~~~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 279 WFVSTGKDNLLNAWRTPYG--ASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEEEETTSEEEEEETTTC--CEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCC--CEEEEccCCCCEEEEEEeCCCCEEEEEeCCCeEEEEEE
Confidence 9999999999999999998 88888999999999999999999999999999999996
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.8e-43 Score=327.71 Aligned_cols=313 Identities=18% Similarity=0.283 Sum_probs=274.2
Q ss_pred EEeccceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCC
Q psy14906 96 AWRRGIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV 173 (583)
Q Consensus 96 vw~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 173 (583)
.|........+|+||+++|+++ +|++++||||+.||+|+|||+.+++.+.++. +|...|.+++|+|+
T Consensus 2 ~w~p~~~~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~-----------~h~~~V~~~~~~~~ 70 (317)
T d1vyhc1 2 EWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK-----------GHTDSVQDISFDHS 70 (317)
T ss_dssp CCCCCSSCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC-----------CCSSCEEEEEECTT
T ss_pred ccCCCCCccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEe-----------CCCCcEEEEeeecc
Confidence 5766666677899999999998 8999999999999999999999999999987 89999999999999
Q ss_pred CCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEE
Q psy14906 174 VDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTG 253 (583)
Q Consensus 174 ~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~ 253 (583)
+.+++++..++.+.+|+....+....+..|...+.++.|+|+++ .+++++.|+.+++||+++++....+ .+|...+.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~ 148 (317)
T d1vyhc1 71 GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQTGYCVKTF-TGHREWVRM 148 (317)
T ss_dssp SSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEE
T ss_pred cccccccccccccccccccccccccccccccccceeeeccCCCc-eEEeeccCcceeEeecccceeeeEE-ccCCCccee
Confidence 99999999999999999999988888899999999999999999 8999999999999999999988888 789999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceee
Q psy14906 254 AHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 254 ~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 333 (583)
++|+|++++|++++.|+.+++|++. .......+.+|...+.++.++| +.........
T Consensus 149 ~~~~~~~~~l~~~~~d~~v~~~~~~----~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~------------------ 205 (317)
T d1vyhc1 149 VRPNQDGTLIASCSNDQTVRVWVVA----TKECKAELREHRHVVECISWAP-ESSYSSISEA------------------ 205 (317)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECC-SCGGGGGGGC------------------
T ss_pred eecccCCCEEEEEeCCCeEEEEeec----cceeeEEEecCCCCceEEEEee-ccccceeecc------------------
Confidence 9999999999999999999999765 4567778888999999999986 3322111111
Q ss_pred ccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCC
Q psy14906 334 GIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQS 413 (583)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (583)
.
T Consensus 206 -------------------------------------------------------------------------------~ 206 (317)
T d1vyhc1 206 -------------------------------------------------------------------------------T 206 (317)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred -------------------------------------------------------------------------------c
Confidence 1
Q ss_pred CceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCC
Q psy14906 414 KPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK 493 (583)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~ 493 (583)
.........++.++++++.|+.|++||+.+++.+..+ .+|...|.+++|+|++++|++++.||.|++||+.++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-- 279 (317)
T d1vyhc1 207 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL-----VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK-- 279 (317)
T ss_dssp SCC-------CCEEEEEETTSEEEEEETTTTEEEEEE-----ECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS--
T ss_pred cceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEE-----eCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCC--
Confidence 1223334456788999999999999999999998888 789999999999999999999999999999999988
Q ss_pred CceEEeec-cCCeeeEEeccCCcEEEEEeCCceEEEEE
Q psy14906 494 PPLRSIKL-DNGISFFRTHQESSMLAVCLDDFTVNIID 530 (583)
Q Consensus 494 ~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~i~d 530 (583)
+++..+.. ..+|++++|+|++++|++|+.||+|+|||
T Consensus 280 ~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 280 RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp CCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 78887764 57999999999999999999999999997
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.6e-42 Score=328.90 Aligned_cols=317 Identities=17% Similarity=0.271 Sum_probs=253.5
Q ss_pred EEEEeCCCcEEEEEcCCCcEEE----EeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEE
Q psy14906 124 LISVDEESNVKVWDIKAEETYL----ELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLME 199 (583)
Q Consensus 124 l~s~~~dg~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~ 199 (583)
.+....++...+|+....+... ... +|.+.|+|++|+|||++||+|+ |+.|+|||+.+++.+..
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~ 98 (388)
T d1erja_ 31 ALKKQTNDYYILYNPALPREIDVELHKSL-----------DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVAR 98 (388)
T ss_dssp TSEEECSSCEEEECTTSCCCEEEEEEEEE-----------ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEE
T ss_pred ccccCCCCcEEEeCCCCCcceeeeeEeeC-----------CCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEee
Confidence 4456778889999976654322 111 7999999999999999999986 88999999999988776
Q ss_pred Ee------------------ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCC
Q psy14906 200 FI------------------QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEP 261 (583)
Q Consensus 200 ~~------------------~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 261 (583)
+. .|...|++++|+|+++ +|++|+.||.|++||...++.+... .+|...|.++++++++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~-~l~s~~~dg~v~i~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~ 176 (388)
T d1erja_ 99 LSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK-FLATGAEDRLIRIWDIENRKIVMIL-QGHEQDIYSLDYFPSGD 176 (388)
T ss_dssp ECC-----------------CCCCBEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEECTTSS
T ss_pred ecccccccccccccccccccCCCCCEEEEEECCCCC-cceeccccccccccccccccccccc-ccccccccccccccccc
Confidence 64 3456699999999999 9999999999999999999998888 78999999999999999
Q ss_pred EEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhh
Q psy14906 262 LLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRN 341 (583)
Q Consensus 262 ~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 341 (583)
.+++++.++.+++|++. ......... +......+.+.+.++.+|++++.||.|++||..++.....+...
T Consensus 177 ~~~~~~~~~~i~~~d~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~----- 246 (388)
T d1erja_ 177 KLVSGSGDRTVRIWDLR----TGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSE----- 246 (388)
T ss_dssp EEEEEETTSEEEEEETT----TTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-------
T ss_pred cccccccceeeeeeecc----ccccccccc-cccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccc-----
Confidence 99999999999999764 334444444 34456677787778899999999999999998776543222000
Q ss_pred hhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEc
Q psy14906 342 NLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYIT 421 (583)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 421 (583)
T Consensus 247 -------------------------------------------------------------------------------- 246 (388)
T d1erja_ 247 -------------------------------------------------------------------------------- 246 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCC--------
Q psy14906 422 HCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGK-------- 493 (583)
Q Consensus 422 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~-------- 493 (583)
.... .+|...|++++|+|++++|++++.||.|++||+.....
T Consensus 247 -------------------------~~~~-----~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 296 (388)
T d1erja_ 247 -------------------------NESG-----TGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 296 (388)
T ss_dssp ----------------------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------------
T ss_pred -------------------------cccc-----cCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCcccccccccc
Confidence 0001 46777788888888888888888888888888765421
Q ss_pred --C-ceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEE------ecCCCcEEEEEeC
Q psy14906 494 --P-PLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDAD------FSPDSRWLITASM 564 (583)
Q Consensus 494 --~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~------~s~d~~~l~s~~~ 564 (583)
. ......+...|.+++|+|++++|++|+.||.|++||+++++++.++++|.+.|++++ |+|++++||||+.
T Consensus 297 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~ 376 (388)
T d1erja_ 297 SGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSG 376 (388)
T ss_dssp --CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEET
T ss_pred ccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeC
Confidence 1 112223456899999999999999999999999999999999999999999999987 4679999999999
Q ss_pred CCeEEEEeCC
Q psy14906 565 DCTIRVWDIP 574 (583)
Q Consensus 565 d~~i~vw~~~ 574 (583)
||+|+||+++
T Consensus 377 Dg~I~iW~~~ 386 (388)
T d1erja_ 377 DCKARIWKYK 386 (388)
T ss_dssp TSEEEEEEEE
T ss_pred CCEEEEEeee
Confidence 9999999984
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.6e-42 Score=321.35 Aligned_cols=302 Identities=20% Similarity=0.330 Sum_probs=260.0
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
+|.++|++++|+|++++||+|+.||+|+|||+.+++.+.++.+|...|.+++|+|++. +++++..++.+.+|+....+.
T Consensus 15 GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 93 (317)
T d1vyhc1 15 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFEC 93 (317)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSS-EEEEEETTSCCCEEETTSSCE
T ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccc-ccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999 899999999999999998888
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
...+ .+|...+.++.|+|+++.+++++.|+.+++|++. .+.....+.+|...+.+++|+| ++.+|++++.|+.+
T Consensus 94 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v 167 (317)
T d1vyhc1 94 IRTM-HGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ----TGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTV 167 (317)
T ss_dssp EECC-CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCE
T ss_pred cccc-ccccccceeeeccCCCceEEeeccCcceeEeecc----cceeeeEEccCCCcceeeeccc-CCCEEEEEeCCCeE
Confidence 7777 7899999999999999999999999999999775 4567788899999999999997 89999999999999
Q ss_pred EEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 320 RIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 320 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
++|++.++.....+.
T Consensus 168 ~~~~~~~~~~~~~~~----------------------------------------------------------------- 182 (317)
T d1vyhc1 168 RVWVVATKECKAELR----------------------------------------------------------------- 182 (317)
T ss_dssp EEEETTTCCEEEEEC-----------------------------------------------------------------
T ss_pred EEEeeccceeeEEEe-----------------------------------------------------------------
Confidence 999998765543321
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN 479 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 479 (583)
.+...+.+++++|++...... .............+.++++++.
T Consensus 183 ----------~~~~~i~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~ 225 (317)
T d1vyhc1 183 ----------EHRHVVECISWAPESSYSSIS---------------------------EATGSETKKSGKPGPFLLSGSR 225 (317)
T ss_dssp ----------CCSSCEEEEEECCSCGGGGGG---------------------------GCCSCC-------CCEEEEEET
T ss_pred ----------cCCCCceEEEEeeccccceee---------------------------ccccceeeeeccCCceeEeccC
Confidence 011457777777765432211 1112223344456788999999
Q ss_pred CCcEEEEEccCCCCCceEEeec-cCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcE
Q psy14906 480 DQTVKVWHFKQTGKPPLRSIKL-DNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW 558 (583)
Q Consensus 480 dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~ 558 (583)
|+.|++||+.++ +++..+.. ...|.+++++|++++|++|+.||.|++||+.+++++..+.+|.+.|++++|+|++++
T Consensus 226 d~~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~ 303 (317)
T d1vyhc1 226 DKTIKMWDVSTG--MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPY 303 (317)
T ss_dssp TSEEEEEETTTT--EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSC
T ss_pred CCEEEEEECCCC--cEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 999999999988 77777654 578999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCeEEEEe
Q psy14906 559 LITASMDCTIRVWD 572 (583)
Q Consensus 559 l~s~~~d~~i~vw~ 572 (583)
|++|+.||+|+|||
T Consensus 304 l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 304 VVTGSVDQTVKVWE 317 (317)
T ss_dssp EEEEETTSEEEEEC
T ss_pred EEEEeCCCeEEEeC
Confidence 99999999999997
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=2e-41 Score=310.96 Aligned_cols=283 Identities=14% Similarity=0.144 Sum_probs=234.0
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
.+.+....++++|+|+.||.+. ++.|.+||+.+++....+.+|...|++++|+|+|+ +|++|+.||+|++||+.+++.
T Consensus 15 ~~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~sp~g~-~latg~~dg~i~iwd~~~~~~ 92 (311)
T d1nr0a1 15 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGY-YCASGDVHGNVRIWDTTQTTH 92 (311)
T ss_dssp CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEESSSTTC
T ss_pred CCCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEEeCCCC-eEeccccCceEeeeeeecccc
Confidence 4455677899999999999885 56799999999999999999999999999999999 899999999999999988764
Q ss_pred h--hhhhhccccceEEEEEecCCCEEEEEeC--CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCC-EEEEee
Q psy14906 240 E--NQIKKAHRKVVTGAHFLYNEPLLVTSSP--DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSD-NILSAA 314 (583)
Q Consensus 240 ~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~--d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~ 314 (583)
. ..+ ..|..+|.+++|+|++++|++++. +..+++|+++ ..+....+.+|...|.+++|+| +++ .|++++
T Consensus 93 ~~~~~~-~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~----~~~~~~~l~~h~~~v~~v~~~~-~~~~~l~sgs 166 (311)
T d1nr0a1 93 ILKTTI-PVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD----TGTSNGNLTGQARAMNSVDFKP-SRPFRIISGS 166 (311)
T ss_dssp CEEEEE-ECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT----TCCBCBCCCCCSSCEEEEEECS-SSSCEEEEEE
T ss_pred cccccc-ccccCccccccccccccccccccccccccccccccc----cccccccccccccccccccccc-cceeeecccc
Confidence 4 335 679999999999999999999986 4569999876 3455567788999999999987 455 577888
Q ss_pred CCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCc
Q psy14906 315 GDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYK 394 (583)
Q Consensus 315 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 394 (583)
.|+.|++||+++++.
T Consensus 167 ~d~~i~i~d~~~~~~----------------------------------------------------------------- 181 (311)
T d1nr0a1 167 DDNTVAIFEGPPFKF----------------------------------------------------------------- 181 (311)
T ss_dssp TTSCEEEEETTTBEE-----------------------------------------------------------------
T ss_pred ccccccccccccccc-----------------------------------------------------------------
Confidence 888888888765321
Q ss_pred ccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEE
Q psy14906 395 SKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIV 474 (583)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 474 (583)
...+ ..|...|+++.|+|+++++
T Consensus 182 ----------------------------------------------------~~~~-----~~~~~~i~~v~~~p~~~~l 204 (311)
T d1nr0a1 182 ----------------------------------------------------KSTF-----GEHTKFVHSVRYNPDGSLF 204 (311)
T ss_dssp ----------------------------------------------------EEEE-----CCCSSCEEEEEECTTSSEE
T ss_pred ----------------------------------------------------cccc-----ccccccccccccCcccccc
Confidence 1112 4688889999999999999
Q ss_pred EEeecCCcEEEEEccCCCCCceEEee--------ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeeccccc-
Q psy14906 475 ISGGNDQTVKVWHFKQTGKPPLRSIK--------LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMG- 545 (583)
Q Consensus 475 ~s~~~dg~i~iwd~~~~~~~~~~~~~--------~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~- 545 (583)
++++.|+.|++||...+ .....++ |...|.+++|+|++++|++|+.||.|+|||+++++++..+..|..
T Consensus 205 ~~~~~d~~v~~~d~~~~--~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~ 282 (311)
T d1nr0a1 205 ASTGGDGTIVLYNGVDG--TKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 282 (311)
T ss_dssp EEEETTSCEEEEETTTC--CEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred ccccccccccccccccc--cccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCc
Confidence 99999999999998876 5554443 456899999999999999999999999999999999998887654
Q ss_pred ceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 546 QLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 546 ~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
....+.+.+++++|++++.||.|++||.+
T Consensus 283 ~~~~~~~~~~~~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 283 EDQQLGIIWTKQALVSISANGFINFVNPE 311 (311)
T ss_dssp GGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred cceEEEEEecCCEEEEEECCCEEEEEeCC
Confidence 23334455566789999999999999974
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.6e-40 Score=313.21 Aligned_cols=344 Identities=15% Similarity=0.175 Sum_probs=261.9
Q ss_pred eeeeecccCccE-EEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe
Q psy14906 103 IVGTYKGHTSPV-HLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL 181 (583)
Q Consensus 103 ~~~~~~~h~~~v-~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 181 (583)
...+|+||...| +|+++++++||+|+.||+|+|||+.+++++.++. +|.++|.+++|+|+ .+|++|+
T Consensus 4 ~~~tL~GH~~~vitc~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~-----------~H~~~V~~l~~s~~-~~l~s~s 71 (355)
T d1nexb2 4 QRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLS-----------GHDGGVWALKYAHG-GILVSGS 71 (355)
T ss_dssp EEEEEECCSSSCEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEE-----------CCSSCEEEEEEETT-TEEEEEE
T ss_pred CcEEECCcCCCcEEEEEECCCEEEEEeCCCeEEEEECCCCcEEEEEE-----------CCCCCEEEEEEcCC-CEEEEEe
Confidence 356799998875 7789999999999999999999999999999998 99999999999985 5899999
Q ss_pred cCCeEEEEEccCCceeEEEeccCC--CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecC
Q psy14906 182 SNKKIILHNILTDESLMEFIQTWG--PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN 259 (583)
Q Consensus 182 ~d~~i~iw~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 259 (583)
.|+.|++|+....+.......... ......+.+++. ++++++.|+.|++||+.+..........+. .......+.
T Consensus 72 ~D~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~--~~~~~~~~~ 148 (355)
T d1nexb2 72 TDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIK-YIVTGSRDNTLHVWKLPKESSVPDHGEEHD--YPLVFHTPE 148 (355)
T ss_dssp TTCCEEEEETTTTEEEEEECCCSSCEEEEEEEEETTEE-EEEEEETTSEEEEEECCC-----------C--CCEEESCTT
T ss_pred cccccccccccccccccccccccccccccccccccccc-eeeeecCCCcEEEEEccCCceeccccccce--eccceeccc
Confidence 999999999998887776654433 345567788887 899999999999999988766554411111 111111111
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhh
Q psy14906 260 EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAN 339 (583)
Q Consensus 260 ~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 339 (583)
...........|...+... .+ +++.++++..|+.+++||+.+++......
T Consensus 149 ----------------------~~~~~~~~~~~~~~~v~~~--~~-~~~~~~~~~~d~~i~~~d~~~~~~~~~~~----- 198 (355)
T d1nexb2 149 ----------------------ENPYFVGVLRGHMASVRTV--SG-HGNIVVSGSYDNTLIVWDVAQMKCLYILS----- 198 (355)
T ss_dssp ----------------------TCTTEEEEEECCSSCEEEE--EE-ETTEEEEEETTSCEEEEETTTTEEEEEEC-----
T ss_pred ----------------------cccceeeeeeecccccccc--cc-ccceeeeecccceeeeeecccccceeeee-----
Confidence 1222233334454444433 33 67899999999999999998765433221
Q ss_pred hhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEE
Q psy14906 340 RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVY 419 (583)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 419 (583)
.+...+.++.
T Consensus 199 ----------------------------------------------------------------------~~~~~~~~~~ 208 (355)
T d1nexb2 199 ----------------------------------------------------------------------GHTDRIYSTI 208 (355)
T ss_dssp ----------------------------------------------------------------------CCSSCEEEEE
T ss_pred ----------------------------------------------------------------------cccccccccc
Confidence 0114678899
Q ss_pred EccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEe
Q psy14906 420 ITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI 499 (583)
Q Consensus 420 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 499 (583)
++|+++++++++.|+.|++||..++.....+ .+|...|.++++++ ++|++++.||.|++||+.+. ......
T Consensus 209 ~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~-----~~h~~~v~~~~~~~--~~l~~~~~dg~i~iwd~~~~--~~~~~~ 279 (355)
T d1nexb2 209 YDHERKRCISASMDTTIRIWDLENGELMYTL-----QGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDY--SRKFSY 279 (355)
T ss_dssp EETTTTEEEEEETTSCEEEEETTTCCEEEEE-----CCCSSCCCEEEECS--SEEEEECTTSEEEEEETTTC--CEEEEE
T ss_pred ccccceeeecccccceEEeeecccccccccc-----cccccccccccccc--ceeeeeeccccccccccccc--ceeccc
Confidence 9999999999999999999999999999888 79999999999964 68999999999999999876 444443
Q ss_pred eccCCeee-EEeccCCcEEEEEeCCceEEEEEccccceEE-eecccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 500 KLDNGISF-FRTHQESSMLAVCLDDFTVNIIDIDTCTIIR-KLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 500 ~~~~~v~~-~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
. ...+.+ ..++++++++++| .|+.|++||+++++++. .+.+|.++|.+++|+|+ .++++++.||+++||-+
T Consensus 280 ~-~~~~~~~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~~ 352 (355)
T d1nexb2 280 H-HTNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDGQSFLEIL 352 (355)
T ss_dssp E-CTTCCCCCEEEECSSEEEEE-ETTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETT-EEEEEEESSSCEEEEEE
T ss_pred c-cCCceEEEEEcCCCCEEEEE-eCCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCC-eEEEEEECCCcEEEEEE
Confidence 3 344444 4567777777766 48899999999999885 57789999999999987 57888999998776643
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5.5e-41 Score=314.43 Aligned_cols=292 Identities=17% Similarity=0.319 Sum_probs=255.2
Q ss_pred ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEE
Q psy14906 195 ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKL 274 (583)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~ 274 (583)
+..+++++|.+.|++++|+|+++ +|++|+.||+|++||+.+++.+..+ ..|...|.+++|+|+++++++++.|+.+++
T Consensus 46 ~~~~tL~GH~~~I~~l~~s~~~~-~l~sgs~Dg~v~iWd~~~~~~~~~~-~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~ 123 (340)
T d1tbga_ 46 RTRRTLRGHLAKIYAMHWGTDSR-LLVSASQDGKLIIWDSYTTNKVHAI-PLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSS-EEEEEETTTEEEEEETTTTEEEEEE-ECSCSCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred eeeEEECCCCCCEEEEEECCCCC-EEEEEECCCceeeeecccceeEEEE-ecccccEEeeEeeccceeeeeecccceeec
Confidence 45677999999999999999999 9999999999999999999999988 789999999999999999999999999999
Q ss_pred EEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcccc
Q psy14906 275 WIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNE 354 (583)
Q Consensus 275 w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (583)
|+.............+.+|.......... .+..+.....+.....+...........
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 180 (340)
T d1tbga_ 124 YNLKTREGNVRVSRELAGHTGYLSCCRFL--DDNQIVTSSGDTTCALWDIETGQQTTTF--------------------- 180 (340)
T ss_dssp EESSSSCSCCCEEEEECCCSSCEEEEEEE--ETTEEEEEETTTEEEEEETTTTEEEEEE---------------------
T ss_pred ccccccccccccceecccccccccccccc--cccccccccccccccccccccccccccc---------------------
Confidence 98776655666777788887766665554 4667888888888888877654322111
Q ss_pred ccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCc
Q psy14906 355 KFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434 (583)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 434 (583)
......+....+.+.+.+++++..|+
T Consensus 181 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~d~ 206 (340)
T d1tbga_ 181 ------------------------------------------------------TGHTGDVMSLSLAPDTRLFVSGACDA 206 (340)
T ss_dssp ------------------------------------------------------ECCSSCEEEEEECTTSSEEEEEETTT
T ss_pred ------------------------------------------------------cccceeEeeeccccccceeEEeecCc
Confidence 00114677888999999999999999
Q ss_pred eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEee---ccCCeeeEEec
Q psy14906 435 HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIK---LDNGISFFRTH 511 (583)
Q Consensus 435 ~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~~~v~~~~~s 511 (583)
.|++||+.+++....+ .+|...|++++|+|++++|++++.||.|++|++... .....+. +...+.+++|+
T Consensus 207 ~v~i~d~~~~~~~~~~-----~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~--~~~~~~~~~~~~~~i~~~~~s 279 (340)
T d1tbga_ 207 SAKLWDVREGMCRQTF-----TGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD--QELMTYSHDNIICGITSVSFS 279 (340)
T ss_dssp EEEEEETTTTEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEEEECCTTCCSCEEEEEEC
T ss_pred eEEEEECCCCcEEEEE-----eCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccc--ccccccccccccCceEEEEEC
Confidence 9999999999999888 789999999999999999999999999999999887 5555543 33579999999
Q ss_pred cCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEe
Q psy14906 512 QESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 512 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~ 572 (583)
|++++|++|+.||.|++||+.+++++..+.+|.++|++++|+||+++|+||+.||+|+|||
T Consensus 280 ~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 280 KSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999999999997
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=9.5e-41 Score=306.49 Aligned_cols=283 Identities=11% Similarity=0.109 Sum_probs=237.5
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc
Q psy14906 116 LILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE 195 (583)
Q Consensus 116 ~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~ 195 (583)
+.+|+|+.||.++ ++.|.+||+++++....+. +|...|++++|+|+|++||+|+.||+|++||+.+++
T Consensus 24 a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~~-----------~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~ 91 (311)
T d1nr0a1 24 GNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYT-----------EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT 91 (311)
T ss_dssp EECTTSSEEEEEE-TTEEEEEETTCSSCCEEEC-----------CCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT
T ss_pred EEcCCCCEEEEEe-CCEEEEEECCCCceeEEEc-----------CCCCCEEEEEEeCCCCeEeccccCceEeeeeeeccc
Confidence 4599999999975 6789999999998888887 999999999999999999999999999999998876
Q ss_pred ee--EEEeccCCCeEEEEEecCCCCEEEEEcC--CCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCE-EEEEeCCC
Q psy14906 196 SL--MEFIQTWGPVTALSFRTDGPPMMVSGSN--TGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPL-LVTSSPDN 270 (583)
Q Consensus 196 ~~--~~~~~~~~~v~~~~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~ 270 (583)
.. ..+..|..+|.+++|+|+++ ++++++. +..+++|++++++....+ .+|...|.+++|+|++++ |++|+.|+
T Consensus 92 ~~~~~~~~~~~~~v~~v~~s~d~~-~l~~~~~~~~~~~~v~~~~~~~~~~~l-~~h~~~v~~v~~~~~~~~~l~sgs~d~ 169 (311)
T d1nr0a1 92 HILKTTIPVFSGPVKDISWDSESK-RIAAVGEGRERFGHVFLFDTGTSNGNL-TGQARAMNSVDFKPSRPFRIISGSDDN 169 (311)
T ss_dssp CCEEEEEECSSSCEEEEEECTTSC-EEEEEECCSSCSEEEEETTTCCBCBCC-CCCSSCEEEEEECSSSSCEEEEEETTS
T ss_pred cccccccccccCcccccccccccc-ccccccccccccccccccccccccccc-cccccccccccccccceeeeccccccc
Confidence 54 45778989999999999999 7777765 466999999999998888 899999999999999885 88899999
Q ss_pred eEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchh
Q psy14906 271 TLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLE 350 (583)
Q Consensus 271 ~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (583)
.|++||++ ..+....+..|..+|.++.|+| +++++++++.|+.+++||+.++.....+...
T Consensus 170 ~i~i~d~~----~~~~~~~~~~~~~~i~~v~~~p-~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~-------------- 230 (311)
T d1nr0a1 170 TVAIFEGP----PFKFKSTFGEHTKFVHSVRYNP-DGSLFASTGGDGTIVLYNGVDGTKTGVFEDD-------------- 230 (311)
T ss_dssp CEEEEETT----TBEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEECBCT--------------
T ss_pred cccccccc----ccccccccccccccccccccCc-ccccccccccccccccccccccccccccccc--------------
Confidence 99999765 5678888899999999999998 8999999999999999999877654433111
Q ss_pred ccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEE
Q psy14906 351 KMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIG 430 (583)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 430 (583)
......|...|++++|+|++++|++|
T Consensus 231 ------------------------------------------------------~~~~~~h~~~V~~~~~s~~~~~l~tg 256 (311)
T d1nr0a1 231 ------------------------------------------------------SLKNVAHSGSVFGLTWSPDGTKIASA 256 (311)
T ss_dssp ------------------------------------------------------TSSSCSSSSCEEEEEECTTSSEEEEE
T ss_pred ------------------------------------------------------ccccccccccccccccCCCCCEEEEE
Confidence 01112234679999999999999999
Q ss_pred ecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEcc
Q psy14906 431 YSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFK 489 (583)
Q Consensus 431 ~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 489 (583)
+.||.|++||+.+++++..+... ..+...+.++.| +++.|++++.||.|++||++
T Consensus 257 s~Dg~v~iwd~~t~~~~~~l~~~--~~~~~~~~~~~~--~~~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 257 SADKTIKIWNVATLKVEKTIPVG--TRIEDQQLGIIW--TKQALVSISANGFINFVNPE 311 (311)
T ss_dssp ETTSEEEEEETTTTEEEEEEECC--SSGGGCEEEEEE--CSSCEEEEETTCCEEEEETT
T ss_pred eCCCeEEEEECCCCcEEEEEECC--CCccceEEEEEe--cCCEEEEEECCCEEEEEeCC
Confidence 99999999999999988877321 122234444444 56679999999999999974
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.3e-41 Score=320.19 Aligned_cols=331 Identities=17% Similarity=0.217 Sum_probs=253.8
Q ss_pred eEEEEEcCCeEEEEeccc-----eeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCce--
Q psy14906 84 FHIYTSANNIIYAWRRGI-----DIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTF-- 154 (583)
Q Consensus 84 ~~~~~~~~~~i~vw~~~~-----~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-- 154 (583)
..+....++.+.+|+... ..+....+|++.|+++ +|||++||+|+ |++|+|||+.+++.+.++.......
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~ 108 (388)
T d1erja_ 30 DALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKD 108 (388)
T ss_dssp TTSEEECSSCEEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-------
T ss_pred cccccCCCCcEEEeCCCCCcceeeeeEeeCCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeeccccccccc
Confidence 356667778888888531 1122233699999997 99999999986 8999999999998887765322110
Q ss_pred -----EEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcE
Q psy14906 155 -----KIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHL 229 (583)
Q Consensus 155 -----~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i 229 (583)
......|...|.+++|+|++++|++|+.||.|++||..+++.+..+.+|...|.+++|++++. .+++++.++.+
T Consensus 109 ~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~~~~~~~~i 187 (388)
T d1erja_ 109 PENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD-KLVSGSGDRTV 187 (388)
T ss_dssp ----------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSEE
T ss_pred ccccccccccCCCCCEEEEEECCCCCcceecccccccccccccccccccccccccccccccccccccc-cccccccceee
Confidence 011136788899999999999999999999999999999999999999999999999999998 89999999999
Q ss_pred EEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeE-------EeccCCCCCeeEEE
Q psy14906 230 TVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLR-------IREGHSAPPNYIQF 302 (583)
Q Consensus 230 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~-------~~~~~~~~v~~~~~ 302 (583)
++||..+....... ..+...+....+.+++++|++++.|+.+++|++.. ..... ...+|...|.+++|
T Consensus 188 ~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~----~~~~~~~~~~~~~~~~h~~~v~~l~~ 262 (388)
T d1erja_ 188 RIWDLRTGQCSLTL-SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET----GFLVERLDSENESGTGHKDSVYSVVF 262 (388)
T ss_dssp EEEETTTTEEEEEE-ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTT----CCEEEEEC------CCCSSCEEEEEE
T ss_pred eeeecccccccccc-ccccccccccccCCCCCeEEEEcCCCeEEEeeccc----CccceeeccccccccCCCCCEEEEEE
Confidence 99999988877766 44444444444445889999999999999997653 22222 23568889999999
Q ss_pred eeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEec
Q psy14906 303 YGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHT 382 (583)
Q Consensus 303 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (583)
+| ++++|++++.||.|++||+.+............
T Consensus 263 s~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-------------------------------------------- 297 (388)
T d1erja_ 263 TR-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNS-------------------------------------------- 297 (388)
T ss_dssp CT-TSSEEEEEETTSEEEEEEC----------------------------------------------------------
T ss_pred CC-CCCEEEEEECCCcEEEEeccCCccccccccccc--------------------------------------------
Confidence 97 899999999999999999987654332210000
Q ss_pred CCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCe
Q psy14906 383 GKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGV 462 (583)
Q Consensus 383 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v 462 (583)
.... .....+...+.+++|+|++++|++|+.||.|++||+.+++++..+ .+|.+.|
T Consensus 298 -~~~~------------------~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l-----~~H~~~V 353 (388)
T d1erja_ 298 -GTCE------------------VTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML-----QGHRNSV 353 (388)
T ss_dssp --CEE------------------EEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEE-----ECCSSCE
T ss_pred -ccee------------------eecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEE-----eCCCCCE
Confidence 0000 011122367999999999999999999999999999999999988 7999999
Q ss_pred eEEEE------eCCCcEEEEeecCCcEEEEEccC
Q psy14906 463 RGVVS------DNLNQIVISGGNDQTVKVWHFKQ 490 (583)
Q Consensus 463 ~~~~~------s~~~~~l~s~~~dg~i~iwd~~~ 490 (583)
.++++ +|++++|++|+.||+|+||+++.
T Consensus 354 ~~~~~~~~~~~spd~~~l~s~s~Dg~I~iW~~~k 387 (388)
T d1erja_ 354 ISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387 (388)
T ss_dssp EEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEEEEecCcccCCCCCEEEEEeCCCEEEEEeeee
Confidence 99975 67899999999999999999863
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5.2e-41 Score=317.67 Aligned_cols=304 Identities=15% Similarity=0.143 Sum_probs=240.9
Q ss_pred CcceEEEeeCCCCCEEEEEecCCeEEEEEccCCc--eeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDE--SLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
..+|+|++|+||+++||+|+.|+.|++||..+++ .+..+.+|.++|++++|+|+++ +|++++.|++|++||+.+++.
T Consensus 7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~-~l~s~s~D~~i~vWd~~~~~~ 85 (371)
T d1k8kc_ 7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSN-RIVTCGTDRNAYVWTLKGRTW 85 (371)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTT-EEEEEETTSCEEEEEEETTEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCC-EEEEEECCCeEEEEeeccccc
Confidence 5789999999999999999999999999998775 5677889999999999999998 899999999999999987754
Q ss_pred h--hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC
Q psy14906 240 E--NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS 317 (583)
Q Consensus 240 ~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 317 (583)
. ..+ .+|...|.+++|+|+++.|++++.|+.+++|+++..............|...|.+++|+| ++++|++++.|+
T Consensus 86 ~~~~~~-~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p-~~~~l~s~s~D~ 163 (371)
T d1k8kc_ 86 KPTLVI-LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP-NSVLLAAGSCDF 163 (371)
T ss_dssp EEEEEC-CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT-TSSEEEEEETTS
T ss_pred cccccc-ccccccccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccc-cccceeccccCc
Confidence 3 334 578899999999999999999999999999988765443444556778999999999998 899999999999
Q ss_pred cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccc
Q psy14906 318 TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKM 397 (583)
Q Consensus 318 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 397 (583)
++++|+.............
T Consensus 164 ~v~v~~~~~~~~~~~~~~~------------------------------------------------------------- 182 (371)
T d1k8kc_ 164 KCRIFSAYIKEVEERPAPT------------------------------------------------------------- 182 (371)
T ss_dssp CEEEEECCCTTTSCCCCCB-------------------------------------------------------------
T ss_pred EEEEEeeccCccccccccc-------------------------------------------------------------
Confidence 9999998765432111000
Q ss_pred cceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEe
Q psy14906 398 DDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISG 477 (583)
Q Consensus 398 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 477 (583)
+.+ .+...+...... ..|...|.+++|+|++++|+++
T Consensus 183 ------------------------~~~--------------~~~~~~~~~~~~-----~~~~~~v~~~~~s~~g~~l~s~ 219 (371)
T d1k8kc_ 183 ------------------------PWG--------------SKMPFGELMFES-----SSSCGWVHGVCFSANGSRVAWV 219 (371)
T ss_dssp ------------------------TTB--------------SCCCTTCEEEEC-----CCCSSCEEEEEECSSSSEEEEE
T ss_pred ------------------------ccc--------------ccccceeeeeec-----cCccCcEEEEEeeccccccccc
Confidence 000 000111222223 5789999999999999999999
Q ss_pred ecCCcEEEEEccCCCCCceEEeecc-CCeeeEEeccCCcEEEEEeCCceEEEEEcccc--ceEE----------------
Q psy14906 478 GNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQESSMLAVCLDDFTVNIIDIDTC--TIIR---------------- 538 (583)
Q Consensus 478 ~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~--~~~~---------------- 538 (583)
+.|+.|++||+..+ +.+..+..+ .+|.+++|+|++++|++|. |+.+++|..+.. ....
T Consensus 220 ~~d~~i~iwd~~~~--~~~~~~~~~~~~v~s~~fs~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (371)
T d1k8kc_ 220 SHDSTVCLADADKK--MAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLT 296 (371)
T ss_dssp ETTTEEEEEEGGGT--TEEEEEECSSCCEEEEEEEETTEEEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------C
T ss_pred ccCCcceEEeeecc--cceeeeecccccceeeeecCCCCEEEEEc-CCceEEEEeeCCCceEEEeeeecCcccccccccc
Confidence 99999999999988 777776654 5899999999999888765 666666654321 1100
Q ss_pred -----------------------eecccccceeeEEecCCC----cEEEEEeCCCeEEEEeCCC
Q psy14906 539 -----------------------KLSGHMGQLTDADFSPDS----RWLITASMDCTIRVWDIPS 575 (583)
Q Consensus 539 -----------------------~~~~h~~~v~~l~~s~d~----~~l~s~~~d~~i~vw~~~~ 575 (583)
....|.+.|+++++.+.+ ..++|++.||.|++||+++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~ 360 (371)
T d1k8kc_ 297 ARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360 (371)
T ss_dssp HHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred ceeeEecccceeEEeccccccceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCc
Confidence 001388899999998754 3689999999999999966
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.1e-39 Score=299.69 Aligned_cols=323 Identities=22% Similarity=0.308 Sum_probs=254.2
Q ss_pred ceeeeeecccCccEE-EEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEE
Q psy14906 101 IDIVGTYKGHTSPVH-LILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV 179 (583)
Q Consensus 101 ~~~~~~~~~h~~~v~-~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 179 (583)
.+..++|+||++.|. +++++|++||||+.||+|+|||+.+++++.++. +|...|.+++|+|+ +|++
T Consensus 6 ~~~~~~l~GH~~~V~s~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~-----------~h~~~V~~v~~~~~--~l~s 72 (342)
T d2ovrb2 6 LKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV-----------GHTGGVWSSQMRDN--IIIS 72 (342)
T ss_dssp CCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECC-----------CCSSCEEEEEEETT--EEEE
T ss_pred CCcCEEECCcCCceEEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEe-----------CCCCCEEEEEeCCC--cccc
Confidence 356778999999875 579999999999999999999999999999987 99999999999874 9999
Q ss_pred EecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecC
Q psy14906 180 GLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYN 259 (583)
Q Consensus 180 ~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 259 (583)
|+.|+.+++|+............+...+....+.+. .++.+..|+.+.+|+..+++....+ ..+... ...+.+.
T Consensus 73 ~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~i~~~~~~~~~~~~~~-~~~~~~--~~~~~~~ 146 (342)
T d2ovrb2 73 GSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVL-MGHVAA--VRCVQYD 146 (342)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT---EEEEEETTSEEEEEESSSCCEEEEE-ECCSSC--EEEEEEC
T ss_pred ceecccccccccccccceecccccceeEeeeecccc---cccccccceeEEEeecccccceeee-eccccc--ceeeccc
Confidence 999999999999988877777777666666655543 6788889999999999988877666 233322 2344556
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhh
Q psy14906 260 EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAN 339 (583)
Q Consensus 260 ~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 339 (583)
...+++++.|+.+++|+.. ....+..+.+|...+..+.+ ++.++++++.||.|++||++.++
T Consensus 147 ~~~~~~~~~d~~i~~~d~~----~~~~~~~~~~~~~~~~~~~~---~~~~l~s~~~dg~i~~~d~~~~~----------- 208 (342)
T d2ovrb2 147 GRRVVSGAYDFMVKVWDPE----TETCLHTLQGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGN----------- 208 (342)
T ss_dssp SSCEEEEETTSCEEEEEGG----GTEEEEEECCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCC-----------
T ss_pred cceeeeecCCCeEEEeecc----cceeeEEEcCcccccccccC---CCCEEEEEeCCCeEEEeecccce-----------
Confidence 7788999999999999765 45666777777655444433 56677787777777777765432
Q ss_pred hhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEE
Q psy14906 340 RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVY 419 (583)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 419 (583)
T Consensus 209 -------------------------------------------------------------------------------- 208 (342)
T d2ovrb2 209 -------------------------------------------------------------------------------- 208 (342)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEe
Q psy14906 420 ITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI 499 (583)
Q Consensus 420 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 499 (583)
.+..+ .+|...+.++++++ ++|++++.|+.|++||+... +....+
T Consensus 209 --------------------------~~~~~-----~~~~~~v~~~~~~~--~~l~s~s~d~~i~iwd~~~~--~~~~~~ 253 (342)
T d2ovrb2 209 --------------------------CIHTL-----TGHQSLTSGMELKD--NILVSGNADSTVKIWDIKTG--QCLQTL 253 (342)
T ss_dssp --------------------------EEEEE-----CCCCSCEEEEEEET--TEEEEEETTSCEEEEETTTC--CEEEEE
T ss_pred --------------------------eeeEe-----cccccceeEEecCC--CEEEEEcCCCEEEEEecccc--cccccc
Confidence 22222 56777888887754 68999999999999999887 666555
Q ss_pred eccC--CeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeec-----ccccceeeEEecCCCcEEEEEeCCCe----E
Q psy14906 500 KLDN--GISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLS-----GHMGQLTDADFSPDSRWLITASMDCT----I 568 (583)
Q Consensus 500 ~~~~--~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----~h~~~v~~l~~s~d~~~l~s~~~d~~----i 568 (583)
.... .....+++++++++++|+.||.|++||+++++.+..+. +|.+.|++++|+|++.+||+|+.||+ |
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l 333 (342)
T d2ovrb2 254 QGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKL 333 (342)
T ss_dssp CSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEE
T ss_pred cccceeeeceeecccCCCeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEE
Confidence 4321 22333444567899999999999999999999887764 57788999999999999999999985 9
Q ss_pred EEEeCCC
Q psy14906 569 RVWDIPS 575 (583)
Q Consensus 569 ~vw~~~~ 575 (583)
++||++.
T Consensus 334 ~~~Df~~ 340 (342)
T d2ovrb2 334 LVLDFDV 340 (342)
T ss_dssp EEEECCC
T ss_pred EEEeCCC
Confidence 9999863
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=1.3e-38 Score=298.17 Aligned_cols=289 Identities=19% Similarity=0.296 Sum_probs=252.8
Q ss_pred eeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEE
Q psy14906 102 DIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGV 179 (583)
Q Consensus 102 ~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 179 (583)
+..++|+||.++|+++ +|++++||+|+.||+|+|||+.+++.+..+. .|...|.+++|+|+++++++
T Consensus 46 ~~~~tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~-----------~~~~~v~~v~~~~~~~~l~~ 114 (340)
T d1tbga_ 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIP-----------LRSSWVMTCAYAPSGNYVAC 114 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEE-----------CSCSCEEEEEECTTSSEEEE
T ss_pred eeeEEECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEe-----------cccccEEeeEeeccceeeee
Confidence 5677899999999997 8999999999999999999999999999998 89999999999999999999
Q ss_pred EecCCeEEEEEccCC----ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEE
Q psy14906 180 GLSNKKIILHNILTD----ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAH 255 (583)
Q Consensus 180 ~~~d~~i~iw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 255 (583)
|+.|+.+.+|+.... .....+.+|...........+. .+.....+.....++.......... ..+...+....
T Consensus 115 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 191 (340)
T d1tbga_ 115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTF-TGHTGDVMSLS 191 (340)
T ss_dssp EETTCCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETT--EEEEEETTTEEEEEETTTTEEEEEE-ECCSSCEEEEE
T ss_pred ecccceeecccccccccccccceeccccccccccccccccc--ccccccccccccccccccccccccc-cccceeEeeec
Confidence 999999999997654 3455667886666666666554 5788888999999998887766666 57788899999
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeecc
Q psy14906 256 FLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGI 335 (583)
Q Consensus 256 ~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 335 (583)
+.+.+.++++++.|+.+++||+. ..+.+..+.+|...|.+++|+| ++++|++++.||.+++||+........+..
T Consensus 192 ~~~~~~~~~~~~~d~~v~i~d~~----~~~~~~~~~~h~~~i~~v~~~p-~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~ 266 (340)
T d1tbga_ 192 LAPDTRLFVSGACDASAKLWDVR----EGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSH 266 (340)
T ss_dssp ECTTSSEEEEEETTTEEEEEETT----TTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred cccccceeEEeecCceEEEEECC----CCcEEEEEeCCCCCeEEEEECC-CCCEEEEEeCCCeEEEEeeccccccccccc
Confidence 99999999999999999999765 5678888999999999999997 899999999999999999987654332210
Q ss_pred chhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCc
Q psy14906 336 ASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKP 415 (583)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i 415 (583)
..+...+
T Consensus 267 -------------------------------------------------------------------------~~~~~~i 273 (340)
T d1tbga_ 267 -------------------------------------------------------------------------DNIICGI 273 (340)
T ss_dssp -------------------------------------------------------------------------TTCCSCE
T ss_pred -------------------------------------------------------------------------ccccCce
Confidence 0111568
Q ss_pred eEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE
Q psy14906 416 TCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487 (583)
Q Consensus 416 ~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 487 (583)
.+++|+|++++|++|+.||.|++||+.+++.+..+ .+|...|++++|+|++++|++|+.||.|+|||
T Consensus 274 ~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~-----~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 274 TSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVL-----AGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEE-----cCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 99999999999999999999999999999999988 79999999999999999999999999999997
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=9.7e-40 Score=299.78 Aligned_cols=290 Identities=17% Similarity=0.204 Sum_probs=229.7
Q ss_pred CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEE
Q psy14906 194 DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLK 273 (583)
Q Consensus 194 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~ 273 (583)
|+..+.+.+|.+.|++++|+|+++ +|++|+.||+|++||+++++.+..+..+|...|++++|+|++++ ++++.|+.++
T Consensus 2 g~~~~~~~GH~~~V~~l~~s~dg~-~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-~~~~~d~~v~ 79 (299)
T d1nr0a2 2 GSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDL-FTVSWDDHLK 79 (299)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCE-EEEETTTEEE
T ss_pred CccceEcCCCCCCcEEEEECCCCC-EEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeecccee-ecccceeeEE
Confidence 567788999999999999999999 89999999999999999999888886689999999999999975 5566799999
Q ss_pred EEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 274 LWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 274 ~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
+|+...... .........+...+.+++++| +++.+++++ ++.+.+|+........
T Consensus 80 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~-~g~~~~~~~-~~~i~~~~~~~~~~~~---------------------- 134 (299)
T d1nr0a2 80 VVPAGGSGV-DSSKAVANKLSSQPLGLAVSA-DGDIAVAAC-YKHIAIYSHGKLTEVP---------------------- 134 (299)
T ss_dssp EECSSSSSS-CTTSCCEEECSSCEEEEEECT-TSSCEEEEE-SSEEEEEETTEEEEEE----------------------
T ss_pred EeccCCccc-ccccccccccccccccccccc-ccccccccc-cccccccccccccccc----------------------
Confidence 997643221 111222334667888999997 777766655 4689999853211000
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 433 (583)
....+.+++++|+++++++|+.|
T Consensus 135 ---------------------------------------------------------~~~~~~~~~~s~~~~~l~~g~~d 157 (299)
T d1nr0a2 135 ---------------------------------------------------------ISYNSSCVALSNDKQFVAVGGQD 157 (299)
T ss_dssp ---------------------------------------------------------CSSCEEEEEECTTSCEEEEEETT
T ss_pred ---------------------------------------------------------ccccccccccccccccccccccc
Confidence 00457789999999999999999
Q ss_pred ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceE---Ee-eccCCeeeEE
Q psy14906 434 GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLR---SI-KLDNGISFFR 509 (583)
Q Consensus 434 g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~-~~~~~v~~~~ 509 (583)
|.|++||+.+++...... ..|...|++++|+|++++|++++.|+.|++||+.++ .... .+ .+..+|.+++
T Consensus 158 g~i~~~d~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~--~~~~~~~~~~~h~~~v~~l~ 231 (299)
T d1nr0a2 158 SKVHVYKLSGASVSEVKT----IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN--FELAHTNSWTFHTAKVACVS 231 (299)
T ss_dssp SEEEEEEEETTEEEEEEE----EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGT--TEESCCCCCCCCSSCEEEEE
T ss_pred cccccccccccccccccc----cccccccccccccccccccccccccccccccccccc--cccccccccccccccccccc
Confidence 999999998876543221 478899999999999999999999999999999876 4332 22 2457899999
Q ss_pred eccCCcEEEEEeCCceEEEEEccccceE--Eeeccc-ccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 510 THQESSMLAVCLDDFTVNIIDIDTCTII--RKLSGH-MGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 510 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~h-~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
|+|++++|++|+.||.|++||++++... .....| ...|.++.| +++++|++++.|++|++||+.
T Consensus 232 ~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 232 WSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEECC
T ss_pred ccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEE-CCCCEEEEEeCCCEEEEEecc
Confidence 9999999999999999999999876533 233334 455666655 567899999999999999984
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.3e-38 Score=297.14 Aligned_cols=320 Identities=17% Similarity=0.245 Sum_probs=253.5
Q ss_pred EeecCCCCCCe-EEEEeeCe-EEEEEcCCeEEEEec-cceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCC
Q psy14906 66 LSVSPQHEDDI-TCLSSDFF-HIYTSANNIIYAWRR-GIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKA 140 (583)
Q Consensus 66 ~~~~~~h~~~v-~~~~~~~~-~~~~~~~~~i~vw~~-~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~ 140 (583)
..+|+||...| +|++++++ +++++.|++|+|||. +++.+.++++|.++|+++ +| +.+|++++.|++|++|+...
T Consensus 5 ~~tL~GH~~~vitc~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~-~~~l~s~s~D~~i~iw~~~~ 83 (355)
T d1nexb2 5 RTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAH-GGILVSGSTDRTVRVWDIKK 83 (355)
T ss_dssp EEEEECCSSSCEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEET-TTEEEEEETTCCEEEEETTT
T ss_pred cEEECCcCCCcEEEEEECCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEcC-CCEEEEEecccccccccccc
Confidence 45688998875 79999885 667789999999996 578899999999999998 55 56899999999999999999
Q ss_pred CcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEE--------------------
Q psy14906 141 EETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEF-------------------- 200 (583)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~-------------------- 200 (583)
.+........ .+........++++++.+++++.|+.|++||+.+.......
T Consensus 84 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (355)
T d1nexb2 84 GCCTHVFEGH---------NSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFV 154 (355)
T ss_dssp TEEEEEECCC---------SSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEE
T ss_pred cccccccccc---------cccccccccccccccceeeeecCCCcEEEEEccCCceeccccccceeccceecccccccee
Confidence 8877766532 44455677788899999999999999999999876543322
Q ss_pred ---eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEc
Q psy14906 201 ---IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIF 277 (583)
Q Consensus 201 ---~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~ 277 (583)
..|...+ ..+.++++ +++++..|+.+++||+.+++.+... .++...+.++.|+|+++++++++.|+.+++|++
T Consensus 155 ~~~~~~~~~v--~~~~~~~~-~~~~~~~d~~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~ 230 (355)
T d1nexb2 155 GVLRGHMASV--RTVSGHGN-IVVSGSYDNTLIVWDVAQMKCLYIL-SGHTDRIYSTIYDHERKRCISASMDTTIRIWDL 230 (355)
T ss_dssp EEEECCSSCE--EEEEEETT-EEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred eeeeeccccc--cccccccc-eeeeecccceeeeeecccccceeee-eccccccccccccccceeeecccccceEEeeec
Confidence 1222233 34556676 8999999999999999999988887 788899999999999999999999999999976
Q ss_pred cCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccC
Q psy14906 278 DKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFI 357 (583)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (583)
. .+..+..+.+|...|.+++++ +++|++++.||.|++||+.+........
T Consensus 231 ~----~~~~~~~~~~h~~~v~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~----------------------- 280 (355)
T d1nexb2 231 E----NGELMYTLQGHTALVGLLRLS---DKFLVSAAADGSIRGWDANDYSRKFSYH----------------------- 280 (355)
T ss_dssp T----TCCEEEEECCCSSCCCEEEEC---SSEEEEECTTSEEEEEETTTCCEEEEEE-----------------------
T ss_pred c----ccccccccccccccccccccc---cceeeeeecccccccccccccceecccc-----------------------
Confidence 5 567788899999999999985 4699999999999999987654221110
Q ss_pred CCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceE-EEEccCCcEEEEEecCceE
Q psy14906 358 LPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTC-VYITHCGNFVLIGYSSGHV 436 (583)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~i 436 (583)
...+.+ ..++++++++++| .||.|
T Consensus 281 ------------------------------------------------------~~~~~~~~~~~~~~~~l~~g-~d~~i 305 (355)
T d1nexb2 281 ------------------------------------------------------HTNLSAITTFYVSDNILVSG-SENQF 305 (355)
T ss_dssp ------------------------------------------------------CTTCCCCCEEEECSSEEEEE-ETTEE
T ss_pred ------------------------------------------------------cCCceEEEEEcCCCCEEEEE-eCCEE
Confidence 022333 3566777777766 58999
Q ss_pred EEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEcc
Q psy14906 437 DRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFK 489 (583)
Q Consensus 437 ~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 489 (583)
++||+++++.+.... .+|...|.+++|+|+ .++++++.||+++||.++
T Consensus 306 ~vwd~~tg~~~~~~~----~~~~~~V~~v~~~~~-~~~~~~s~dg~~~l~~~d 353 (355)
T d1nexb2 306 NIYNLRSGKLVHANI----LKDADQIWSVNFKGK-TLVAAVEKDGQSFLEILD 353 (355)
T ss_dssp EEEETTTCCBCCSCT----TTTCSEEEEEEEETT-EEEEEEESSSCEEEEEEE
T ss_pred EEEECCCCCEEEEEe----cCCCCCEEEEEEcCC-eEEEEEECCCcEEEEEEe
Confidence 999999999875432 689999999999986 578889999997776543
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=5.6e-38 Score=287.95 Aligned_cols=284 Identities=14% Similarity=0.145 Sum_probs=225.4
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEe-ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI-QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ 238 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 238 (583)
+|...|++++|+|++++|++|+.||+|++||+++++.+..+. .|...|++++|+|+++ +++++.|+.+++|+.....
T Consensus 10 GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~--~~~~~~d~~v~~~~~~~~~ 87 (299)
T d1nr0a2 10 GHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGD--LFTVSWDDHLKVVPAGGSG 87 (299)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC--EEEEETTTEEEEECSSSSS
T ss_pred CCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccce--eecccceeeEEEeccCCcc
Confidence 999999999999999999999999999999999999888875 6889999999999997 5566678999999987543
Q ss_pred eh--hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC
Q psy14906 239 VE--NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD 316 (583)
Q Consensus 239 ~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 316 (583)
.. ......+...+.+++|+|+++++++++ ++.+++|+. .+...... ...+.+++|+| +++++++++.|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~-~~~i~~~~~------~~~~~~~~--~~~~~~~~~s~-~~~~l~~g~~d 157 (299)
T d1nr0a2 88 VDSSKAVANKLSSQPLGLAVSADGDIAVAAC-YKHIAIYSH------GKLTEVPI--SYNSSCVALSN-DKQFVAVGGQD 157 (299)
T ss_dssp SCTTSCCEEECSSCEEEEEECTTSSCEEEEE-SSEEEEEET------TEEEEEEC--SSCEEEEEECT-TSCEEEEEETT
T ss_pred ccccccccccccccccccccccccccccccc-ccccccccc------cccccccc--ccccccccccc-ccccccccccc
Confidence 22 222245678899999999999877665 568999953 23333332 34568899997 89999999999
Q ss_pred CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccc
Q psy14906 317 STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSK 396 (583)
Q Consensus 317 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 396 (583)
|.+++||+.+++.....
T Consensus 158 g~i~~~d~~~~~~~~~~--------------------------------------------------------------- 174 (299)
T d1nr0a2 158 SKVHVYKLSGASVSEVK--------------------------------------------------------------- 174 (299)
T ss_dssp SEEEEEEEETTEEEEEE---------------------------------------------------------------
T ss_pred ccccccccccccccccc---------------------------------------------------------------
Confidence 99999999765432211
Q ss_pred ccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEE
Q psy14906 397 MDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS 476 (583)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s 476 (583)
...+...+++++|+|+++++++++.+|.|++||+.++......... ..|...|++++|+|++++|++
T Consensus 175 -----------~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~s~~~~~l~s 241 (299)
T d1nr0a2 175 -----------TIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSW--TFHTAKVACVSWSPDNVRLAT 241 (299)
T ss_dssp -----------EEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCC--CCCSSCEEEEEECTTSSEEEE
T ss_pred -----------cccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccceEE
Confidence 0011257999999999999999999999999999987766544332 679999999999999999999
Q ss_pred eecCCcEEEEEccCCCCCceEEee-cc-CCeeeEEeccCCcEEEEEeCCceEEEEEcc
Q psy14906 477 GGNDQTVKVWHFKQTGKPPLRSIK-LD-NGISFFRTHQESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 477 ~~~dg~i~iwd~~~~~~~~~~~~~-~~-~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 532 (583)
++.||.|++||+.+.......... +. ..+.++. ++++++|++++.|+.|++||+.
T Consensus 242 gs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 242 GSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVI-WLNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp EETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEE-EEETTEEEEEETTSCEEEEECC
T ss_pred EcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEE-ECCCCEEEEEeCCCEEEEEecc
Confidence 999999999999887323332222 22 3455554 5667899999999999999974
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-38 Score=292.24 Aligned_cols=333 Identities=21% Similarity=0.313 Sum_probs=265.8
Q ss_pred EecCCcEEEeecCCCCCCe-EEEEeeCe-EEEEEcCCeEEEEec-cceeeeeecccCccEEEEccCCCEEEEEeCCCcEE
Q psy14906 58 YGCNHFKLLSVSPQHEDDI-TCLSSDFF-HIYTSANNIIYAWRR-GIDIVGTYKGHTSPVHLILPFGPHLISVDEESNVK 134 (583)
Q Consensus 58 ~d~~~~~~~~~~~~h~~~v-~~~~~~~~-~~~~~~~~~i~vw~~-~~~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~ 134 (583)
|+..+.+..++++||.+.| +|++++|+ +++++.|++|+|||+ ++++++++.+|.+.|.++...+.+|++++.|+.++
T Consensus 1 W~~~~~~~~~~l~GH~~~V~s~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~~l~s~s~D~~~~ 80 (342)
T d2ovrb2 1 WRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLK 80 (342)
T ss_dssp HHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEE
T ss_pred CCCCCCCcCEEECCcCCceEEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCCccccceeccccc
Confidence 5666777788899999987 57889885 667789999999997 57889999999999999966677999999999999
Q ss_pred EEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEec
Q psy14906 135 VWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRT 214 (583)
Q Consensus 135 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~ 214 (583)
+|+........... .+...+...... ...++.+..|+.+.+|+..+++....+..+..... .+.+
T Consensus 81 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~ 145 (342)
T d2ovrb2 81 VWNAETGECIHTLY-----------GHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR--CVQY 145 (342)
T ss_dssp EEETTTTEEEEEEC-----------CCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEE--EEEE
T ss_pred ccccccccceeccc-----------ccceeEeeeecc--cccccccccceeEEEeecccccceeeeecccccce--eecc
Confidence 99999887776665 455555555444 56778889999999999999988887776644333 3344
Q ss_pred CCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCC
Q psy14906 215 DGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS 294 (583)
Q Consensus 215 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~ 294 (583)
... .+++++.|+.+++||....+.+..+ .+|...+..+ .+++.++++++.|+.|++|+++ ..+.+..+.+|.
T Consensus 146 ~~~-~~~~~~~d~~i~~~d~~~~~~~~~~-~~~~~~~~~~--~~~~~~l~s~~~dg~i~~~d~~----~~~~~~~~~~~~ 217 (342)
T d2ovrb2 146 DGR-RVVSGAYDFMVKVWDPETETCLHTL-QGHTNRVYSL--QFDGIHVVSGSLDTSIRVWDVE----TGNCIHTLTGHQ 217 (342)
T ss_dssp CSS-CEEEEETTSCEEEEEGGGTEEEEEE-CCCSSCEEEE--EECSSEEEEEETTSCEEEEETT----TCCEEEEECCCC
T ss_pred ccc-eeeeecCCCeEEEeecccceeeEEE-cCcccccccc--cCCCCEEEEEeCCCeEEEeecc----cceeeeEecccc
Confidence 445 6889999999999999999888888 6787766554 5578899999999999999765 557788899999
Q ss_pred CCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccccccc
Q psy14906 295 APPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDW 374 (583)
Q Consensus 295 ~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (583)
..+.++.++ +++|++++.|+.|++||+...+....+...
T Consensus 218 ~~v~~~~~~---~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~-------------------------------------- 256 (342)
T d2ovrb2 218 SLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGP-------------------------------------- 256 (342)
T ss_dssp SCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECST--------------------------------------
T ss_pred cceeEEecC---CCEEEEEcCCCEEEEEeccccccccccccc--------------------------------------
Confidence 999888775 469999999999999999876544332110
Q ss_pred ccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCC
Q psy14906 375 NNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDN 454 (583)
Q Consensus 375 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 454 (583)
..+...+.++ .++++++++|+.||.|++||+++++.+..+....
T Consensus 257 ----------------------------------~~~~~~~~~~--~~~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~ 300 (342)
T d2ovrb2 257 ----------------------------------NKHQSAVTCL--QFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE 300 (342)
T ss_dssp ----------------------------------TSCSSCEEEE--EECSSEEEEEETTSEEEEEETTTCCEEEEEEECT
T ss_pred ----------------------------------ceeeeceeec--ccCCCeeEEEcCCCEEEEEECCCCCEEEEEeccc
Confidence 0011234444 4456799999999999999999999887764433
Q ss_pred CCCcccCeeEEEEeCCCcEEEEeecCCc----EEEEEccC
Q psy14906 455 QPGHVGGVRGVVSDNLNQIVISGGNDQT----VKVWHFKQ 490 (583)
Q Consensus 455 ~~~h~~~v~~~~~s~~~~~l~s~~~dg~----i~iwd~~~ 490 (583)
..+|...|++++|+|++.+|++|+.||+ |++||++.
T Consensus 301 ~~~~~~~v~~v~~s~~~~~la~g~~dGt~~~~l~~~Df~~ 340 (342)
T d2ovrb2 301 SGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340 (342)
T ss_dssp TGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CCCCCCCEEEEEECCCCCEEEEEeCCCCCeeEEEEEeCCC
Confidence 3578889999999999999999999985 99999874
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=4.1e-38 Score=297.65 Aligned_cols=329 Identities=13% Similarity=0.083 Sum_probs=235.3
Q ss_pred CccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCc--EEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeE
Q psy14906 111 TSPVHLI--LPFGPHLISVDEESNVKVWDIKAEE--TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKI 186 (583)
Q Consensus 111 ~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i 186 (583)
..+|+|+ +|||++||+++.||.|+|||..+++ ++..+. +|.++|.+++|+|++++|++|+.|++|
T Consensus 7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~-----------gH~~~V~~l~fsp~~~~l~s~s~D~~i 75 (371)
T d1k8kc_ 7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK-----------EHNGQVTGVDWAPDSNRIVTCGTDRNA 75 (371)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE-----------CCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEec-----------CCCCCEEEEEECCCCCEEEEEECCCeE
Confidence 4678886 8999999999999999999998876 445555 899999999999999999999999999
Q ss_pred EEEEccCCcee--EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee---hhhhhhccccceEEEEEecCCC
Q psy14906 187 ILHNILTDESL--MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV---ENQIKKAHRKVVTGAHFLYNEP 261 (583)
Q Consensus 187 ~iw~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~ 261 (583)
++||+.+++.. ..+.+|...|.+++|+|+++ .|++++.|+.+++|+++.... .......|...|.+++|+|+++
T Consensus 76 ~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~-~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~ 154 (371)
T d1k8kc_ 76 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV 154 (371)
T ss_dssp EEEEEETTEEEEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS
T ss_pred EEEeecccccccccccccccccccccccccccc-cceeecccCcceeeeeeccccccccccccccccccccccccccccc
Confidence 99999877644 44567888999999999999 899999999999999876532 1222257889999999999999
Q ss_pred EEEEEeCCCeEEEEEccCCC--------------CCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEcccc
Q psy14906 262 LLVTSSPDNTLKLWIFDKAD--------------GNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSE 327 (583)
Q Consensus 262 ~l~s~~~d~~i~~w~~~~~~--------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 327 (583)
+|++++.|+.+++|+..... .....+.....|...|.+++|+| ++++|++++.|+.|++||+.++
T Consensus 155 ~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~s~~~d~~i~iwd~~~~ 233 (371)
T d1k8kc_ 155 LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA-NGSRVAWVSHDSTVCLADADKK 233 (371)
T ss_dssp EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS-SSSEEEEEETTTEEEEEEGGGT
T ss_pred ceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeec-ccccccccccCCcceEEeeecc
Confidence 99999999999999864321 12345667788999999999998 8999999999999999999876
Q ss_pred ccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccc
Q psy14906 328 TSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERC 407 (583)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 407 (583)
.....+.
T Consensus 234 ~~~~~~~------------------------------------------------------------------------- 240 (371)
T d1k8kc_ 234 MAVATLA------------------------------------------------------------------------- 240 (371)
T ss_dssp TEEEEEE-------------------------------------------------------------------------
T ss_pred cceeeee-------------------------------------------------------------------------
Confidence 6544321
Q ss_pred cccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE
Q psy14906 408 KQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487 (583)
Q Consensus 408 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 487 (583)
.+..++.+++|+|+++++++|. |+.+.+|..........+... ............+.... + ...|.......
T Consensus 241 --~~~~~v~s~~fs~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~ 312 (371)
T d1k8kc_ 241 --SETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGR--LDVPKQSSQRGLTARER-F--QNLDKKASSEG 312 (371)
T ss_dssp --CSSCCEEEEEEEETTEEEEEET-TSSCEEEEEETTTTEEEECCC--CCCC--------CHHHH-H--HHCCCCC----
T ss_pred --cccccceeeeecCCCCEEEEEc-CCceEEEEeeCCCceEEEeee--ecCccccccccccceee-E--ecccceeEEec
Confidence 1125789999999999888765 676777766544333322100 00000000000000000 0 00111111111
Q ss_pred ccCCCCCceEEeeccCCeeeEEeccCCc----EEEEEeCCceEEEEEccccc
Q psy14906 488 FKQTGKPPLRSIKLDNGISFFRTHQESS----MLAVCLDDFTVNIIDIDTCT 535 (583)
Q Consensus 488 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~----~l~~~~~dg~i~i~d~~~~~ 535 (583)
.... .......|.+.|+++++.+.+. .+++++.||.|++||+++.+
T Consensus 313 ~~~~--~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~~~ 362 (371)
T d1k8kc_ 313 SAAA--GAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 362 (371)
T ss_dssp -------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred cccc--cceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCCcCh
Confidence 1111 1111113667899999988653 68999999999999997643
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1e-34 Score=268.58 Aligned_cols=286 Identities=16% Similarity=0.182 Sum_probs=222.3
Q ss_pred CcceEEEeeCCCCCEEEEEecCC-eEEEEEccCC--ceeEEEecc-CCCeEEEEEecC--CCCEEEEEcCCCcEEEEeCC
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLSNK-KIILHNILTD--ESLMEFIQT-WGPVTALSFRTD--GPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~d~-~i~iw~~~~~--~~~~~~~~~-~~~v~~~~~~~~--~~~~l~s~~~dg~i~vwd~~ 235 (583)
...+++++|+|+++.|++++.+. .|+.|+.... ..+..+.+| ...|++++|+|+ +. +|++|+.||+|++||+.
T Consensus 17 ~~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~-~lasgs~Dg~i~iWd~~ 95 (325)
T d1pgua1 17 RNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ-YLCSGDESGKVIVWGWT 95 (325)
T ss_dssp TTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCC-EEEEEETTSEEEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCC-EEEEEeCCCCEEEeeec
Confidence 45678899999999999886554 3455664433 446677777 467999999984 55 89999999999999997
Q ss_pred CCeehhhhh-------hccccceEEEEEecCCCEEEEEeC--CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC
Q psy14906 236 DRQVENQIK-------KAHRKVVTGAHFLYNEPLLVTSSP--DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306 (583)
Q Consensus 236 ~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~s~~~--d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 306 (583)
.++....+. ..|.++|.+++|+++++++++++. ++.+++|+++ .++.+..+.+|...|.+++|+|..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~ 171 (325)
T d1pgua1 96 FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD----SGNSLGEVSGHSQRINACHLKQSR 171 (325)
T ss_dssp EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT----TCCEEEECCSCSSCEEEEEECSSS
T ss_pred CCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeec----ccccceeeeecccccccccccccc
Confidence 655443321 357789999999999999887764 6789999776 467888899999999999999854
Q ss_pred CCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCce
Q psy14906 307 SDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNK 386 (583)
Q Consensus 307 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (583)
..++++++.|+.+++||....+.....
T Consensus 172 ~~~~~~~~~d~~v~~~d~~~~~~~~~~----------------------------------------------------- 198 (325)
T d1pgua1 172 PMRSMTVGDDGSVVFYQGPPFKFSASD----------------------------------------------------- 198 (325)
T ss_dssp SCEEEEEETTTEEEEEETTTBEEEEEE-----------------------------------------------------
T ss_pred cceEEEeecccccccccccccccceec-----------------------------------------------------
Confidence 456788999999999997643211100
Q ss_pred EEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEE
Q psy14906 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVV 466 (583)
Q Consensus 387 i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 466 (583)
... ..|...|++++
T Consensus 199 -------------------------------------------------------------~~~-----~~~~~~v~~v~ 212 (325)
T d1pgua1 199 -------------------------------------------------------------RTH-----HKQGSFVRDVE 212 (325)
T ss_dssp -------------------------------------------------------------CSS-----SCTTCCEEEEE
T ss_pred -------------------------------------------------------------ccc-----cCCCCccEEee
Confidence 001 47888899999
Q ss_pred EeCC-CcEEEEeecCCcEEEEEccCCCCCceEEeecc-CCeeeEEec---cCCcEEEEEeCCceEEEEEccccceEEeec
Q psy14906 467 SDNL-NQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTH---QESSMLAVCLDDFTVNIIDIDTCTIIRKLS 541 (583)
Q Consensus 467 ~s~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~s---~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 541 (583)
|+|+ +.+|++++.|+.|++||++++ +.+..+..+ .++..+.|+ |+|++|++++.|+.|+|||+++++++..+.
T Consensus 213 ~~pd~~~~l~s~~~d~~i~iwd~~~~--~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~ 290 (325)
T d1pgua1 213 FSPDSGEFVITVGSDRKISCFDGKSG--EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWT 290 (325)
T ss_dssp ECSTTCCEEEEEETTCCEEEEETTTC--CEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eccccceeccccccccceeeeeeccc--cccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEEE
Confidence 9996 688999999999999999988 777777644 466666665 789999999999999999999999998877
Q ss_pred ccccc--eeeEEecCC-CcEEEEEeCCCeEEEEeC
Q psy14906 542 GHMGQ--LTDADFSPD-SRWLITASMDCTIRVWDI 573 (583)
Q Consensus 542 ~h~~~--v~~l~~s~d-~~~l~s~~~d~~i~vw~~ 573 (583)
.|... +..+++.+. +.+|++++.||+|++||+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 291 LDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp CCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred ecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence 66654 444454433 347899999999999996
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.2e-33 Score=258.46 Aligned_cols=275 Identities=11% Similarity=0.108 Sum_probs=216.9
Q ss_pred cccEEEEEeCCCceEEEEeeCCeE--EEEecCC--cEEEeecCCC-CCCeEEEEee----CeE-EEEEcCCeEEEEeccc
Q psy14906 32 LPVVARFIRRRKETLFVTCVGKAF--HVYGCNH--FKLLSVSPQH-EDDITCLSSD----FFH-IYTSANNIIYAWRRGI 101 (583)
Q Consensus 32 ~~~~~~~~p~~~~~~i~~~~~~~i--~v~d~~~--~~~~~~~~~h-~~~v~~~~~~----~~~-~~~~~~~~i~vw~~~~ 101 (583)
.+.++.|+|+++. ++++.++.+ +.||... ......+.+| ...|++++|. +++ ++++.||+|+|||...
T Consensus 19 ~~t~l~~~~~~~~--la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~ 96 (325)
T d1pgua1 19 FTTHLSYDPTTNA--IAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTF 96 (325)
T ss_dssp CCCCCEEETTTTE--EEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred CeEEEEECCCCCE--EEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecC
Confidence 4567899999877 445555554 4455433 2335566777 4679999984 344 4677999999999631
Q ss_pred ---------eeeeeecccCccEEEE--ccCCCEEEEEeC--CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEE
Q psy14906 102 ---------DIVGTYKGHTSPVHLI--LPFGPHLISVDE--ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVL 168 (583)
Q Consensus 102 ---------~~~~~~~~h~~~v~~i--s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 168 (583)
.....+..|.++|.++ ++++++|++++. ++.+++|++++++.+..+. +|...|.++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~h~~~v~~~ 165 (325)
T d1pgua1 97 DKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVS-----------GHSQRINAC 165 (325)
T ss_dssp EGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECC-----------SCSSCEEEE
T ss_pred CcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeee-----------ecccccccc
Confidence 2233456799999987 899999988764 6789999999999999987 899999999
Q ss_pred eeCCCCCE-EEEEecCCeEEEEEccCCceeEEEe---ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhh
Q psy14906 169 EPSPVVDI-IGVGLSNKKIILHNILTDESLMEFI---QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK 244 (583)
Q Consensus 169 ~~s~~~~~-l~~~~~d~~i~iw~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 244 (583)
+|+|++.+ +++++.|+.+++||..+++....+. .|...|.+++|+|++..++++++.|+.|++||+++++.+..+
T Consensus 166 ~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l- 244 (325)
T d1pgua1 166 HLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYI- 244 (325)
T ss_dssp EECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEEC-
T ss_pred cccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccccccc-
Confidence 99999875 6788999999999998877766654 566789999999986559999999999999999999999988
Q ss_pred hccccceEEEEEe---cCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCC--CeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 245 KAHRKVVTGAHFL---YNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAP--PNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 245 ~~~~~~v~~~~~~---~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
.+|...+..+.|+ |++++|++++.|+.|+|||+. .++.+..+..|... +..+++.+..+.+|++++.||.|
T Consensus 245 ~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i 320 (325)
T d1pgua1 245 EDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVT----TSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTL 320 (325)
T ss_dssp CBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETT----TTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCE
T ss_pred cccccccccceeeeeccCCCEEEEEeCCCeEEEEECC----CCCEEEEEEecCCcccCeEEEEEECCCCEEEEEECCCEE
Confidence 7888877666665 789999999999999999775 45677766665544 44555554345689999999999
Q ss_pred EEEEc
Q psy14906 320 RIFNT 324 (583)
Q Consensus 320 ~iwd~ 324 (583)
++||+
T Consensus 321 ~vwdl 325 (325)
T d1pgua1 321 NFYEL 325 (325)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 99996
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.1e-33 Score=255.47 Aligned_cols=280 Identities=14% Similarity=0.157 Sum_probs=219.6
Q ss_pred cEEEeecCCCCCCeEEEEeeCeEEEEEcCCeEEEEeccceeeeeecccCccEEEE-ccCCCEEEEEeCCCcEEEEEcCCC
Q psy14906 63 FKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLI-LPFGPHLISVDEESNVKVWDIKAE 141 (583)
Q Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~i-s~~~~~l~s~~~dg~i~iwd~~~~ 141 (583)
.++++++.||..+|+++++++ +++++.||+|++||.... .++|...|.++ ..++..+++++.|++|++|++...
T Consensus 3 ~~~i~~l~gH~~~I~~l~~s~-l~sgs~Dg~v~~Wd~~~~----~~~h~~~V~~~~~~~~~~~~s~s~D~~v~~w~~~~~ 77 (287)
T d1pgua2 3 DEVLKTISGHNKGITALTVNP-LISGSYDGRIMEWSSSSM----HQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKH 77 (287)
T ss_dssp EEEEEEECCCSSCEEEEETTT-TEEEETTSCEEETTTTEE----ECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEE
T ss_pred cceeEEECCCCCceEEEEECc-EEEEeCCCeEEEEECCCC----CCCCCCCEEEEEecCCCeEEEEeecccccccccccc
Confidence 578899999999999999987 899999999999997643 46899999998 445667899999999999997542
Q ss_pred cEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEE
Q psy14906 142 ETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221 (583)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 221 (583)
.....+.++++++++..++++. ++.+.+|+..+++.+..+..+ ..+ .++++++. .++
T Consensus 78 ------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~-~~~ 134 (287)
T d1pgua2 78 ------------------EFGSQPKVASANNDGFTAVLTN-DDDLLILQSFTGDIIKSVRLN-SPG--SAVSLSQN-YVA 134 (287)
T ss_dssp ------------------ECSSCEEEEEECSSSEEEEEET-TSEEEEEETTTCCEEEEEECS-SCE--EEEEECSS-EEE
T ss_pred ------------------ccccceeeeeeccCCceEEEee-cccceeeeccceeeeeecccc-cee--eeeeccCc-cee
Confidence 2245577888999887777664 557899999999988887765 343 45677777 555
Q ss_pred EEcCC-CcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCcee-eEEeccCCCCCee
Q psy14906 222 SGSNT-GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRL-LRIREGHSAPPNY 299 (583)
Q Consensus 222 s~~~d-g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~-~~~~~~~~~~v~~ 299 (583)
+++.+ +.+++|++...+....+...|...+++++|+|++.+|++++.||.|++||+. .... ...+.+|..+|.+
T Consensus 135 v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~----~~~~~~~~~~~h~~~v~~ 210 (287)
T d1pgua2 135 VGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQ----SREVKTSRWAFRTSKINA 210 (287)
T ss_dssp EEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT----TTEEEECCSCCCSSCEEE
T ss_pred eeccccceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeec----ccccccccccccccccce
Confidence 55555 5799999987776666645688899999999999999999999999999764 2333 3346788999999
Q ss_pred EEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEE
Q psy14906 300 IQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAA 379 (583)
Q Consensus 300 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (583)
++|+| .+...
T Consensus 211 ~~~~p-~~~~~--------------------------------------------------------------------- 220 (287)
T d1pgua2 211 ISWKP-AEKGA--------------------------------------------------------------------- 220 (287)
T ss_dssp EEECC-CC------------------------------------------------------------------------
T ss_pred eeecc-ccccc---------------------------------------------------------------------
Confidence 99987 33211
Q ss_pred EecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccC-ccccccCCCCCCCc
Q psy14906 380 IHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSG-AHRGSYGHDNQPGH 458 (583)
Q Consensus 380 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~h 458 (583)
..+.+++.++++|+.|+.|++||++++ +....+ .+|
T Consensus 221 --------------------------------------~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~-----~~h 257 (287)
T d1pgua2 221 --------------------------------------NEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKAL-----NAH 257 (287)
T ss_dssp -----------------------------------------CCSCCEEEEEETTSCEEEEESSCTTCCEEET-----TSS
T ss_pred --------------------------------------ccccCCCCeeEeecCCCeEEEEECCCCCeEEEEe-----CCC
Confidence 122345678888888999999998764 344444 689
Q ss_pred ccCeeEEEEeCCCcEEEEeecCCcEEEEEc
Q psy14906 459 VGGVRGVVSDNLNQIVISGGNDQTVKVWHF 488 (583)
Q Consensus 459 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~ 488 (583)
...|++++|+|++ .|++++.|+.|++|++
T Consensus 258 ~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 258 KDGVNNLLWETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp TTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred CCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence 9999999999986 5889999999999986
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.1e-33 Score=257.44 Aligned_cols=270 Identities=16% Similarity=0.204 Sum_probs=214.1
Q ss_pred CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEE
Q psy14906 194 DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLK 273 (583)
Q Consensus 194 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~ 273 (583)
.++++++.+|..+|++++|+| |++|+.||+|++||+.++. .+|...|.++++++++ .+++++.|++++
T Consensus 3 ~~~i~~l~gH~~~I~~l~~s~-----l~sgs~Dg~v~~Wd~~~~~------~~h~~~V~~~~~~~~~-~~~s~s~D~~v~ 70 (287)
T d1pgua2 3 DEVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSSMH------QDHSNLIVSLDNSKAQ-EYSSISWDDTLK 70 (287)
T ss_dssp EEEEEEECCCSSCEEEEETTT-----TEEEETTSCEEETTTTEEE------CCCCSCEEEEECCSTT-CCEEEETTTEEE
T ss_pred cceeEEECCCCCceEEEEECc-----EEEEeCCCeEEEEECCCCC------CCCCCCEEEEEecCCC-eEEEEeeccccc
Confidence 478889999999999999976 8999999999999987643 5799999999998765 578999999999
Q ss_pred EEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 274 LWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 274 ~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
+|++... .....+..+.+.+ ++..++ .+.++.+.+|+..+++....+.
T Consensus 71 ~w~~~~~-----------~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------------------- 118 (287)
T d1pgua2 71 VNGITKH-----------EFGSQPKVASANN-DGFTAV-LTNDDDLLILQSFTGDIIKSVR------------------- 118 (287)
T ss_dssp ETTEEEE-----------ECSSCEEEEEECS-SSEEEE-EETTSEEEEEETTTCCEEEEEE-------------------
T ss_pred ccccccc-----------ccccceeeeeecc-CCceEE-Eeecccceeeeccceeeeeecc-------------------
Confidence 9955311 1233456777774 555554 4556678889887765443321
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecC
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSS 433 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 433 (583)
......+++++++.+++++.+
T Consensus 119 -----------------------------------------------------------~~~~~~~~~~~~~~~~v~~~~ 139 (287)
T d1pgua2 119 -----------------------------------------------------------LNSPGSAVSLSQNYVAVGLEE 139 (287)
T ss_dssp -----------------------------------------------------------CSSCEEEEEECSSEEEEEETT
T ss_pred -----------------------------------------------------------ccceeeeeeccCcceeeeccc
Confidence 123345677888888888877
Q ss_pred c-eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEE--eeccCCeeeEEe
Q psy14906 434 G-HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRS--IKLDNGISFFRT 510 (583)
Q Consensus 434 g-~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~ 510 (583)
+ .+++|++...+....+. ..|...+++++|+|++++|++++.||.|++||+.+. ..... ..|..+|.+++|
T Consensus 140 ~~~v~~~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~--~~~~~~~~~h~~~v~~~~~ 213 (287)
T d1pgua2 140 GNTIQVFKLSDLEVSFDLK----TPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSR--EVKTSRWAFRTSKINAISW 213 (287)
T ss_dssp TSCEEEEETTEEEEEEECS----SCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEECCSCCCSSCEEEEEE
T ss_pred cceeeeeeccccceeeeee----eccCCceeEEEeccCccccccccccccccceeeccc--ccccccccccccccceeee
Confidence 5 69999998766555543 467889999999999999999999999999999876 44322 234578999999
Q ss_pred ccC----------CcEEEEEeCCceEEEEEccc-cceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeC
Q psy14906 511 HQE----------SSMLAVCLDDFTVNIIDIDT-CTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDI 573 (583)
Q Consensus 511 s~~----------~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~ 573 (583)
+|+ +.++++|+.|++|++||+++ ++.+..+.+|...|++++|+|++ .|++++.|++|++|++
T Consensus 214 ~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp CCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred cccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCC-EEEEEECCCeEEEEEE
Confidence 874 56899999999999999976 56777888999999999999987 5889999999999996
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-32 Score=248.70 Aligned_cols=275 Identities=20% Similarity=0.300 Sum_probs=219.8
Q ss_pred eeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec
Q psy14906 103 IVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS 182 (583)
Q Consensus 103 ~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 182 (583)
.++.+.+|...|+|+++||++||||+.||+|+|||+.+++++.++. +|...|.+++| ++++|++|+.
T Consensus 7 ~i~~~~~~~~~V~c~~~d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~-----------~H~~~V~~v~~--~~~~l~s~s~ 73 (293)
T d1p22a2 7 RIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT-----------GHTGSVLCLQY--DERVIITGSS 73 (293)
T ss_dssp CEECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEEC-----------CCSSCEEEEEC--CSSEEEEEET
T ss_pred EEeccCCCCCCEEEEEEcCCEEEEEeCCCeEEEEECCCCcEEEEEe-----------cCCCCEeeeec--ccceeecccc
Confidence 3455678899999999999999999999999999999999999998 99999999987 5789999999
Q ss_pred CCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee---hhhhhhccccceEEEEEecC
Q psy14906 183 NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV---ENQIKKAHRKVVTGAHFLYN 259 (583)
Q Consensus 183 d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~---~~~~~~~~~~~v~~~~~~~~ 259 (583)
|+.|++|++..+........+.... ..+.+... .++++..++.+.+|+...... ...+ ..|...+..+.+.
T Consensus 74 D~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~-- 147 (293)
T d1p22a2 74 DSTVRVWDVNTGEMLNTLIHHCEAV--LHLRFNNG-MMVTCSKDRSIAVWDMASPTDITLRRVL-VGHRAAVNVVDFD-- 147 (293)
T ss_dssp TSCEEEEESSSCCEEEEECCCCSCE--EEEECCTT-EEEEEETTSCEEEEECSSSSCCEEEEEE-CCCSSCEEEEEEE--
T ss_pred ccccccccccccccccccccccccc--cccccccc-ceeecccccceeEeeccccccccccccc-cccccccccceec--
Confidence 9999999999988877776653333 33444444 789999999999999987543 2233 5677888877765
Q ss_pred CCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhh
Q psy14906 260 EPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASAN 339 (583)
Q Consensus 260 ~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 339 (583)
...+++++.|+.+++|++. ..+.+..+.++...+..+.+. +..+++++.||.|++||+.+.........
T Consensus 148 ~~~~~~~s~d~~i~~~d~~----~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---- 216 (293)
T d1p22a2 148 DKYIVSASGDRTIKVWNTS----TCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGACLRVLEG---- 216 (293)
T ss_dssp TTEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEEEEECC----
T ss_pred ccccccccCCCceeeecCC----CCcEEEEEcccccccccccCC---CCeEEEecCCCEEEEEecccceeeeeecc----
Confidence 4568899999999999765 456778888888888777764 56899999999999999987654432210
Q ss_pred hhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEE
Q psy14906 340 RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVY 419 (583)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 419 (583)
.......
T Consensus 217 -------------------------------------------------------------------------~~~~v~~ 223 (293)
T d1p22a2 217 -------------------------------------------------------------------------HEELVRC 223 (293)
T ss_dssp -------------------------------------------------------------------------CSSCEEE
T ss_pred -------------------------------------------------------------------------cceeeee
Confidence 1112234
Q ss_pred EccCCcEEEEEecCceEEEEEcccCcc---------ccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEE
Q psy14906 420 ITHCGNFVLIGYSSGHVDRFNIQSGAH---------RGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWH 487 (583)
Q Consensus 420 ~s~~~~~l~~~~~dg~i~i~d~~~~~~---------~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 487 (583)
+++++.+|++|+.||.|++||+..... ...+ .+|.+.|++++| ++++|++++.||+|++||
T Consensus 224 ~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-----~~H~~~V~~v~~--d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 224 IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTL-----VEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEE-----CCCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred ccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEe-----cCCCCCEEEEEE--cCCEEEEEecCCEEEEeC
Confidence 677889999999999999999875432 2333 689999999999 457899999999999997
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1e-32 Score=257.67 Aligned_cols=311 Identities=8% Similarity=0.045 Sum_probs=231.8
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEE---EeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCC
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLME---FIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLED 236 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~ 236 (583)
+|...|++|+|+|++++||+|+.||+|+|||+.++..... ..+|..+|.+++|+|++..+|++|+.||.|++|++..
T Consensus 9 ~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~ 88 (342)
T d1yfqa_ 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeeeccc
Confidence 8999999999999999999999999999999987654333 3368899999999998765899999999999999998
Q ss_pred CeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCC--CCCeeEEEeeCCCCEEEEee
Q psy14906 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHS--APPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 237 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~l~~~~ 314 (583)
+.........+........+.++...+++++.++.+++||+...............+. .......+.+ .+..+++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 167 (342)
T d1yfqa_ 89 SPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT-NSSRLIVGM 167 (342)
T ss_dssp SSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE-CSSEEEEEE
T ss_pred ccccccccccccccccccccccccccccccccccccceeeccccccceeeecccccccccceeeeeeeec-cCCceeeec
Confidence 7766665334445556667778889999999999999998764433334444444332 2334555665 688999999
Q ss_pred CCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCc
Q psy14906 315 GDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYK 394 (583)
Q Consensus 315 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 394 (583)
.|+.+++||+............
T Consensus 168 ~d~~i~~~~~~~~~~~~~~~~~---------------------------------------------------------- 189 (342)
T d1yfqa_ 168 NNSQVQWFRLPLCEDDNGTIEE---------------------------------------------------------- 189 (342)
T ss_dssp STTEEEEEESSCCTTCCCEEEE----------------------------------------------------------
T ss_pred CCCcEEEEecccCcccceeeee----------------------------------------------------------
Confidence 9999999999876543321100
Q ss_pred ccccceeeecccccccCCCCceEEEE-ccCCcEEEEEecCceEEEEEcccCccccccC----------CCCCCCcccCee
Q psy14906 395 SKMDDMFLVPERCKQAKQSKPTCVYI-THCGNFVLIGYSSGHVDRFNIQSGAHRGSYG----------HDNQPGHVGGVR 463 (583)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~----------~~~~~~h~~~v~ 463 (583)
........+..+ ..++..+++++.+|.+.+|+........... ......|...|+
T Consensus 190 --------------~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 255 (342)
T d1yfqa_ 190 --------------SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVN 255 (342)
T ss_dssp --------------CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEE
T ss_pred --------------cccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccce
Confidence 000022334444 4567889999999999999976543322110 111246788899
Q ss_pred EEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeeccc
Q psy14906 464 GVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGH 543 (583)
Q Consensus 464 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h 543 (583)
+++|+|++++|++|+.||.|++||+.+. +.+..+........++|+|++++|++++.|+.+++|..... .+..|
T Consensus 256 ~l~~sp~~~~lasg~~Dg~v~vWD~~~~--~~l~~~~~~~~~~~~~~s~~~~~l~~a~sdd~~~~~~~~~~----~~~~~ 329 (342)
T d1yfqa_ 256 SIEFSPRHKFLYTAGSDGIISCWNLQTR--KKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQ----TIELN 329 (342)
T ss_dssp EEEECTTTCCEEEEETTSCEEEEETTTT--EEEEECCCCSSSEEEEEEECSSEEEEEEECTHHHHCSSSCT----TSCCC
T ss_pred eEEecCCccEEEEECCCCEEEEEECCCC--cEEEEecCCCCCEEEEEEeCCCEEEEEEcCCcEEEeeeeCC----CccCC
Confidence 9999999999999999999999999988 78887777777888999999999999999988777754321 23445
Q ss_pred ccceee
Q psy14906 544 MGQLTD 549 (583)
Q Consensus 544 ~~~v~~ 549 (583)
...|..
T Consensus 330 ~~~i~~ 335 (342)
T d1yfqa_ 330 ASSIYI 335 (342)
T ss_dssp CCEEEE
T ss_pred CCeEEE
Confidence 555553
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-32 Score=245.74 Aligned_cols=272 Identities=24% Similarity=0.395 Sum_probs=197.7
Q ss_pred cCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCee
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQV 239 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 239 (583)
.|...|+|++| |+++||+|+.||+|+|||+.+++++.++.+|.+.|++++| +++ +|++|+.|+.|++|++..+..
T Consensus 13 ~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~--~~~-~l~s~s~D~~i~~~~~~~~~~ 87 (293)
T d1p22a2 13 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DER-VIITGSSDSTVRVWDVNTGEM 87 (293)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEESSSCCE
T ss_pred CCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec--ccc-eeecccccccccccccccccc
Confidence 77889998765 7999999999999999999999999999999999999987 455 899999999999999998877
Q ss_pred hhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 240 ENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 240 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
.... ..+... ...+.+....++++..++.+.+|+..... .......+..|...+..+.+. ...+++++.|+.+
T Consensus 88 ~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~---~~~~~~~s~d~~i 160 (293)
T d1p22a2 88 LNTL-IHHCEA--VLHLRFNNGMMVTCSKDRSIAVWDMASPT-DITLRRVLVGHRAAVNVVDFD---DKYIVSASGDRTI 160 (293)
T ss_dssp EEEE-CCCCSC--EEEEECCTTEEEEEETTSCEEEEECSSSS-CCEEEEEECCCSSCEEEEEEE---TTEEEEEETTSEE
T ss_pred cccc-cccccc--cccccccccceeecccccceeEeeccccc-cccccccccccccccccceec---ccccccccCCCce
Confidence 6655 233332 33455667789999999999999765432 234445566677777666654 4467777788888
Q ss_pred EEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccc
Q psy14906 320 RIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDD 399 (583)
Q Consensus 320 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 399 (583)
++||+.+++...
T Consensus 161 ~~~d~~~~~~~~-------------------------------------------------------------------- 172 (293)
T d1p22a2 161 KVWNTSTCEFVR-------------------------------------------------------------------- 172 (293)
T ss_dssp EEEETTTCCEEE--------------------------------------------------------------------
T ss_pred eeecCCCCcEEE--------------------------------------------------------------------
Confidence 888876543322
Q ss_pred eeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec
Q psy14906 400 MFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN 479 (583)
Q Consensus 400 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~ 479 (583)
.+ .+|...+..+.++ +.++++++.
T Consensus 173 -------------------------------------------------~~-----~~~~~~v~~~~~~--~~~l~~~~~ 196 (293)
T d1p22a2 173 -------------------------------------------------TL-----NGHKRGIACLQYR--DRLVVSGSS 196 (293)
T ss_dssp -------------------------------------------------EE-----ECCSSCEEEEEEE--TTEEEEEET
T ss_pred -------------------------------------------------EE-----cccccccccccCC--CCeEEEecC
Confidence 11 2344445555443 345666677
Q ss_pred CCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccc---------cceEEeecccccceeeE
Q psy14906 480 DQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDT---------CTIIRKLSGHMGQLTDA 550 (583)
Q Consensus 480 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~h~~~v~~l 550 (583)
||.|++||+.+. ..+.......... ..+++++.+|++++.||.|++||+.+ ...+..+.+|.+.|+++
T Consensus 197 dg~i~i~d~~~~--~~~~~~~~~~~~v-~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v 273 (293)
T d1p22a2 197 DNTIRLWDIECG--ACLRVLEGHEELV-RCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRL 273 (293)
T ss_dssp TSCEEEEETTTC--CEEEEECCCSSCE-EEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCE
T ss_pred CCEEEEEecccc--eeeeeecccceee-eeccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEE
Confidence 777777776665 5555444332221 23455666777777777777777643 34567888999999999
Q ss_pred EecCCCcEEEEEeCCCeEEEEe
Q psy14906 551 DFSPDSRWLITASMDCTIRVWD 572 (583)
Q Consensus 551 ~~s~d~~~l~s~~~d~~i~vw~ 572 (583)
+| |+++|+|++.||+|++||
T Consensus 274 ~~--d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 274 QF--DEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp EE--CSSCEEECCSSSEEEEEC
T ss_pred EE--cCCEEEEEecCCEEEEeC
Confidence 99 467899999999999997
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=8.1e-32 Score=256.33 Aligned_cols=299 Identities=13% Similarity=0.119 Sum_probs=206.5
Q ss_pred EEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhh-----hccccceEEEEE---ec----CCCEEEEE
Q psy14906 199 EFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK-----KAHRKVVTGAHF---LY----NEPLLVTS 266 (583)
Q Consensus 199 ~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-----~~~~~~v~~~~~---~~----~~~~l~s~ 266 (583)
..++|.+.|.++++++ + ++++++.|++|++||..+.+...... ..|...+..+.. .+ ++.+++++
T Consensus 9 ~~~~H~~~I~~v~~~~--~-~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 85 (393)
T d1sq9a_ 9 AGKAHDADIFSVSACN--S-FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 85 (393)
T ss_dssp ESSCSSSCEEEEEECS--S-EEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred cCCcccCccEEEEEeC--C-EEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEE
Confidence 3469999999999875 3 79999999999999976543211110 123333322222 11 23578899
Q ss_pred eCCCeEEEEEccCCCCCceeeEE-e-----ccCCCCCeeEEEeeC----CCCEEEEeeCCCcEEEEEccccccceeeccc
Q psy14906 267 SPDNTLKLWIFDKADGNGRLLRI-R-----EGHSAPPNYIQFYGN----SSDNILSAAGDSTLRIFNTKSETSNKNLGIA 336 (583)
Q Consensus 267 ~~d~~i~~w~~~~~~~~~~~~~~-~-----~~~~~~v~~~~~~~~----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 336 (583)
+.||.+++|++............ . ..+...+..+++.+. .+.++++++.||++++|++...........
T Consensus 86 ~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~- 164 (393)
T d1sq9a_ 86 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLT- 164 (393)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTT-
T ss_pred eCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceee-
Confidence 99999999987644322222211 1 123445667777752 246889999999999999865432111000
Q ss_pred hhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCce
Q psy14906 337 SANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPT 416 (583)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 416 (583)
..... ...+ .........+...+.
T Consensus 165 -------------------~~~~~-------------------------~~~~------------~~~~~~~~~~~~~~~ 188 (393)
T d1sq9a_ 165 -------------------LNWSP-------------------------TLEL------------QGTVESPMTPSQFAT 188 (393)
T ss_dssp -------------------TCCCC-------------------------EEEE------------EEEECCSSSSCCCCC
T ss_pred -------------------eeecc-------------------------ceec------------ccceecccCCCCcEE
Confidence 00000 0000 000011111225688
Q ss_pred EEEEccCCcEEEEEecCceEEEEEcccCccccccCC-CCCCCcccCeeEEEEeCCCcEEEEeecCCc---EEEEEccCCC
Q psy14906 417 CVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGH-DNQPGHVGGVRGVVSDNLNQIVISGGNDQT---VKVWHFKQTG 492 (583)
Q Consensus 417 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~---i~iwd~~~~~ 492 (583)
+++|+|++ ++++|+.||.|++||+.+++.+..+.. ..+.+|..+|++++|+|++++|++|+.|++ |++||++++
T Consensus 189 ~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g- 266 (393)
T d1sq9a_ 189 SVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG- 266 (393)
T ss_dssp EEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC-
T ss_pred EEEECCCC-EEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccc-
Confidence 99999998 889999999999999999887665532 223689999999999999999999999874 899999988
Q ss_pred CCceEEee--------------ccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeeccccccee----eEEecC
Q psy14906 493 KPPLRSIK--------------LDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLT----DADFSP 554 (583)
Q Consensus 493 ~~~~~~~~--------------~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~----~l~~s~ 554 (583)
+++..+. |.+.|++++|+|++++|++++.|++|++||+++++++.++++|.+.|. .++|+|
T Consensus 267 -~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~ 345 (393)
T d1sq9a_ 267 -ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDE 345 (393)
T ss_dssp -CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCT
T ss_pred -eeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCCcccCCccEEEECC
Confidence 6666553 557899999999999999999999999999999999999999987765 356666
Q ss_pred CCcEEE
Q psy14906 555 DSRWLI 560 (583)
Q Consensus 555 d~~~l~ 560 (583)
++..++
T Consensus 346 ~~~~~~ 351 (393)
T d1sq9a_ 346 HGDSLA 351 (393)
T ss_dssp TSCBCS
T ss_pred CCCEEE
Confidence 655443
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=1.3e-33 Score=266.13 Aligned_cols=323 Identities=11% Similarity=0.007 Sum_probs=235.9
Q ss_pred EEeeCC-CCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEc-CCC-cEEEEeCCCCeehhhh
Q psy14906 167 VLEPSP-VVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS-NTG-HLTVWNLEDRQVENQI 243 (583)
Q Consensus 167 ~~~~s~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-~dg-~i~vwd~~~~~~~~~~ 243 (583)
...||| ||+++|+++ +|.|++||+.+++.++ + .|...|.+++|+|||+ +|++++ .++ .|++||.++++... +
T Consensus 7 ~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~-~-~~~~~v~~~~~spDg~-~l~~~~~~~g~~v~v~d~~~~~~~~-~ 81 (360)
T d1k32a3 7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-V-PEPLRIRYVRRGGDTK-VAFIHGTREGDFLGIYDYRTGKAEK-F 81 (360)
T ss_dssp EEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-C-SCCSCEEEEEECSSSE-EEEEEEETTEEEEEEEETTTCCEEE-C
T ss_pred cccccCCCCCEEEEEE-CCeEEEEECCCCcEEE-c-cCCCCEEEEEECCCCC-EEEEEEcCCCCEEEEEECCCCcEEE-e
Confidence 467999 999999876 5799999998777655 3 6889999999999999 555544 443 79999999877654 4
Q ss_pred hhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC--------
Q psy14906 244 KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-------- 315 (583)
Q Consensus 244 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-------- 315 (583)
..|...+.+++|+|++++|++++.++.+++|+++ ..+....+..|...+.+++|+| ++++|+.+..
T Consensus 82 -~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~sp-dg~~la~~~~~~~~~~~~ 155 (360)
T d1k32a3 82 -EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLE----TGKPTVIERSREAMITDFTISD-NSRFIAYGFPLKHGETDG 155 (360)
T ss_dssp -CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETT----TCCEEEEEECSSSCCCCEEECT-TSCEEEEEEEECSSTTCS
T ss_pred -eCCCceEEeeeecccccccceecccccccccccc----ccceeeeeecccccccchhhcc-ceeeeeeeccccccceee
Confidence 4799999999999999999999999999999765 4566677788889999999997 8988886542
Q ss_pred --CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecC
Q psy14906 316 --DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFY 393 (583)
Q Consensus 316 --dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 393 (583)
++.+++||+.+++.....
T Consensus 156 ~~~~~~~v~d~~~~~~~~~~------------------------------------------------------------ 175 (360)
T d1k32a3 156 YVMQAIHVYDMEGRKIFAAT------------------------------------------------------------ 175 (360)
T ss_dssp CCEEEEEEEETTTTEEEECS------------------------------------------------------------
T ss_pred ccccceeeeccccCceeeec------------------------------------------------------------
Confidence 344666666554322111
Q ss_pred cccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCC--CCCCCcccCeeEEEEeCCC
Q psy14906 394 KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGH--DNQPGHVGGVRGVVSDNLN 471 (583)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~h~~~v~~~~~s~~~ 471 (583)
.+...+..++|+|||++|++++.++.+.+|+............ .....|...+..+.|++++
T Consensus 176 ----------------~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 239 (360)
T d1k32a3 176 ----------------TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRS 239 (360)
T ss_dssp ----------------CSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGG
T ss_pred ----------------ccccccccccccCCCCEEEEEeCCCceEcccccccceeeccccceEEEecccCccccceECCCc
Confidence 1114577899999999999999999999999765433211000 0002344445556677777
Q ss_pred cEEEEeecCCc-----EEEEEccCCCCCceEEeeccCCeeeEEeccC---CcEEEEEeCCceEEEEEccccceEEeeccc
Q psy14906 472 QIVISGGNDQT-----VKVWHFKQTGKPPLRSIKLDNGISFFRTHQE---SSMLAVCLDDFTVNIIDIDTCTIIRKLSGH 543 (583)
Q Consensus 472 ~~l~s~~~dg~-----i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h 543 (583)
..++++..+.. +..++...+ ...........+..+.+.+. +.+++.++.++.+++||+++++.. .|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~~ 313 (360)
T d1k32a3 240 MTSEAGEYDLNDMYKRSSPINVDPG--DYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT----EV 313 (360)
T ss_dssp GSCCCCCCCCTTGGGGCEECSCCCB--CEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE----EE
T ss_pred CcccccceeecccccceeecccCcC--ceeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeEE----Ee
Confidence 76665544322 333333333 33333444455555555544 447788889999999999987643 35
Q ss_pred ccceeeEEecCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 544 MGQLTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 544 ~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
.+.|.+++|||||++|++++.||.|++||+++++...++
T Consensus 314 ~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~ 352 (360)
T d1k32a3 314 KNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352 (360)
T ss_dssp EEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEEC
T ss_pred cCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcceEE
Confidence 567999999999999999999999999999999887765
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=2.6e-33 Score=264.16 Aligned_cols=332 Identities=10% Similarity=0.040 Sum_probs=239.8
Q ss_pred EEEEcc-CCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCC--eEEEEE
Q psy14906 114 VHLILP-FGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNK--KIILHN 190 (583)
Q Consensus 114 v~~is~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~--~i~iw~ 190 (583)
...+|| ||+++|+++ +|.|++||+.+++.++ + .|...|.+++|+|||++|++++.+. .|++||
T Consensus 7 ~~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~-~------------~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d 72 (360)
T d1k32a3 7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-V------------PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYD 72 (360)
T ss_dssp EEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-C------------SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEE
T ss_pred cccccCCCCCEEEEEE-CCeEEEEECCCCcEEE-c------------cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEE
Confidence 466899 999999987 5799999999887653 2 6788999999999999998877654 799999
Q ss_pred ccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEe---
Q psy14906 191 ILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS--- 267 (583)
Q Consensus 191 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--- 267 (583)
+++++. ..+..|...|.+++|+|+++ +|++++.++.+++|++.+++....+ ..|...+.+++|+|+|++|+.+.
T Consensus 73 ~~~~~~-~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~la~~~~~~ 149 (360)
T d1k32a3 73 YRTGKA-EKFEENLGNVFAMGVDRNGK-FAVVANDRFEIMTVDLETGKPTVIE-RSREAMITDFTISDNSRFIAYGFPLK 149 (360)
T ss_dssp TTTCCE-EECCCCCCSEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEE-ECSSSCCCCEEECTTSCEEEEEEEEC
T ss_pred CCCCcE-EEeeCCCceEEeeeeccccc-ccceeccccccccccccccceeeee-ecccccccchhhccceeeeeeecccc
Confidence 987655 45677889999999999999 8999999999999999999888777 78889999999999999998653
Q ss_pred -------CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhh
Q psy14906 268 -------PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANR 340 (583)
Q Consensus 268 -------~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 340 (583)
.++.+++|++. . .....+..+...+..++|+| ++++|++++.++.+.+||...........
T Consensus 150 ~~~~~~~~~~~~~v~d~~----~-~~~~~~~~~~~~~~~~~~sp-dg~~l~~~s~~~~~~~~d~~~~~~~~~~~------ 217 (360)
T d1k32a3 150 HGETDGYVMQAIHVYDME----G-RKIFAATTENSHDYAPAFDA-DSKNLYYLSYRSLDPSPDRVVLNFSFEVV------ 217 (360)
T ss_dssp SSTTCSCCEEEEEEEETT----T-TEEEECSCSSSBEEEEEECT-TSCEEEEEESCCCCCEECSSSSCEECCSC------
T ss_pred ccceeeccccceeeeccc----c-CceeeecccccccccccccC-CCCEEEEEeCCCceEcccccccceeeccc------
Confidence 44578999664 2 23344555677788999997 89999999999999999976543211000
Q ss_pred hhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEE
Q psy14906 341 NNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYI 420 (583)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 420 (583)
..+..... +......+.+
T Consensus 218 --------------------------------------------~~~~~~~~------------------~~~~~~~~~~ 235 (360)
T d1k32a3 218 --------------------------------------------SKPFVIPL------------------IPGSPNPTKL 235 (360)
T ss_dssp --------------------------------------------BEEEEEES------------------STTCCCGGGC
T ss_pred --------------------------------------------cceEEEec------------------ccCccccceE
Confidence 00000000 0012223344
Q ss_pred ccCCcEEEEEecC-----ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC---CCcEEEEeecCCcEEEEEccCCC
Q psy14906 421 THCGNFVLIGYSS-----GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN---LNQIVISGGNDQTVKVWHFKQTG 492 (583)
Q Consensus 421 s~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~---~~~~l~s~~~dg~i~iwd~~~~~ 492 (583)
++++..++.+..+ ..+..++...+..... ..+.+.+..+.+.+ +..++++++.++.+++||+.+.
T Consensus 236 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~- 308 (360)
T d1k32a3 236 VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMI------IPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTR- 308 (360)
T ss_dssp CCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEE------EECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTC-
T ss_pred CCCcCcccccceeecccccceeecccCcCceeEe------eecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCC-
Confidence 5555544433221 1233333333332221 13334444444444 3446788889999999999886
Q ss_pred CCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccce
Q psy14906 493 KPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQL 547 (583)
Q Consensus 493 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v 547 (583)
+.. .+.+.+.+++|||||++|++++.||.|++||+++++...++..+..++
T Consensus 309 -~~~---~~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~~d~~~~ 359 (360)
T d1k32a3 309 -KVT---EVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRPL 359 (360)
T ss_dssp -CEE---EEEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEECCCCSSCE
T ss_pred -eEE---EecCCcCEEEECCCCCEEEEEECCCeEEEEECCCCCcceEEEeccccc
Confidence 432 233568999999999999999999999999999998887777665554
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3e-32 Score=254.52 Aligned_cols=303 Identities=11% Similarity=0.077 Sum_probs=221.7
Q ss_pred ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhh--hhccccceEEEEEecCC-CEEEEEeCCCe
Q psy14906 195 ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI--KKAHRKVVTGAHFLYNE-PLLVTSSPDNT 271 (583)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~~~v~~~~~~~~~-~~l~s~~~d~~ 271 (583)
+.+...++|.+.|++|+|+|+++ +|++|+.||+|+|||++++.....+ ..+|..+|.+++|+|++ .+|++|+.|+.
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~~-~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~ 80 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSKS-LLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGE 80 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGT-EEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSC
T ss_pred CeEEcCCCCCCCEEEEEEeCCCC-EEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccc
Confidence 34555679999999999999999 9999999999999999765432222 13699999999999874 58999999999
Q ss_pred EEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhc
Q psy14906 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEK 351 (583)
Q Consensus 272 i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (583)
+++|++.. .........+........+.+.+...+++++.++.+++||++............
T Consensus 81 v~~w~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~-------------- 142 (342)
T d1yfqa_ 81 ILKVDLIG----SPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNL-------------- 142 (342)
T ss_dssp EEEECSSS----SSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEES--------------
T ss_pred eeeeeccc----ccccccccccccccccccccccccccccccccccccceeeccccccceeeeccc--------------
Confidence 99996653 233344444444444444443478899999999999999987654432221000
Q ss_pred cccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe
Q psy14906 352 MNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY 431 (583)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 431 (583)
...........+.+.+++..+++++
T Consensus 143 -------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (342)
T d1yfqa_ 143 -------------------------------------------------------NSNNTKVKNKIFTMDTNSSRLIVGM 167 (342)
T ss_dssp -------------------------------------------------------CSSSSSSCCCEEEEEECSSEEEEEE
T ss_pred -------------------------------------------------------ccccccceeeeeeeeccCCceeeec
Confidence 0000013455677888899999999
Q ss_pred cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeC-CCcEEEEeecCCcEEEEEccCCCCCc----eEE--------
Q psy14906 432 SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDN-LNQIVISGGNDQTVKVWHFKQTGKPP----LRS-------- 498 (583)
Q Consensus 432 ~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~----~~~-------- 498 (583)
.|+.|++|++............ ..+...+.+..+.+ ++..+++++.||.+.+|++....... ...
T Consensus 168 ~d~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (342)
T d1yfqa_ 168 NNSQVQWFRLPLCEDDNGTIEE--SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNL 245 (342)
T ss_dssp STTEEEEEESSCCTTCCCEEEE--CSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCT
T ss_pred CCCcEEEEecccCcccceeeee--cccccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeecc
Confidence 9999999999877654433211 34445566665544 66789999999999999987542111 011
Q ss_pred --eeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCC
Q psy14906 499 --IKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIP 574 (583)
Q Consensus 499 --~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~ 574 (583)
..+...+++++|+|++++||+|+.||.|++||+++++.+..+..+ ..+..++|+|++++|++++.|+.+++|...
T Consensus 246 ~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~-~~~~~~~~s~~~~~l~~a~sdd~~~~~~~~ 322 (342)
T d1yfqa_ 246 KDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp TCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC-SSSEEEEEEECSSEEEEEEECTHHHHCSSS
T ss_pred CCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCC-CCCEEEEEEeCCCEEEEEEcCCcEEEeeee
Confidence 112346889999999999999999999999999999999888643 345667888999999999999988888754
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.4e-32 Score=255.87 Aligned_cols=328 Identities=12% Similarity=0.113 Sum_probs=228.7
Q ss_pred eeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcE------EEEeeccCCceEEecccCCcceE------EEeeC
Q psy14906 104 VGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEET------YLELSFDNDTFKIMGKRWNSCVN------VLEPS 171 (583)
Q Consensus 104 ~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~------~~~~s 171 (583)
....++|.+.|.+++..+++|+|++.|++|+|||..+.+. ..... .|...+. .+..+
T Consensus 7 ~~~~~~H~~~I~~v~~~~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 75 (393)
T d1sq9a_ 7 ANAGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF-----------VHKSGLHHVDVLQAIERD 75 (393)
T ss_dssp EEESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE-----------CCTTCEEEEEEEEEEETT
T ss_pred eecCCcccCccEEEEEeCCEEEEEECCCeEEEEECCCCCCCcccceeEeee-----------eccCCceEeeeEeeeccC
Confidence 4566899999999988889999999999999999876431 11211 3333322 22222
Q ss_pred C-CCCEEEEEecCCeEEEEEccCCceeEEE----------eccCCCeEEEEEecCCC----CEEEEEcCCCcEEEEeCCC
Q psy14906 172 P-VVDIIGVGLSNKKIILHNILTDESLMEF----------IQTWGPVTALSFRTDGP----PMMVSGSNTGHLTVWNLED 236 (583)
Q Consensus 172 ~-~~~~l~~~~~d~~i~iw~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~----~~l~s~~~dg~i~vwd~~~ 236 (583)
. ++.++++++.||.|++|++........+ ..+...+..++|.+++. .++++++.||.+++|++..
T Consensus 76 ~~~~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~ 155 (393)
T d1sq9a_ 76 AFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHP 155 (393)
T ss_dssp TEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEES
T ss_pred CCCCcEEEEEeCCCcEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeec
Confidence 2 3457788999999999998755332221 12445678888887642 2788999999999999853
Q ss_pred Ceehhh-----------------hhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeE------EeccC
Q psy14906 237 RQVENQ-----------------IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLR------IREGH 293 (583)
Q Consensus 237 ~~~~~~-----------------~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~------~~~~~ 293 (583)
...... ....+...+.+++|+|++ +|++|+.|++|++||+. ..+.+. .+.+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~----~~~~~~~~~~~~~l~~h 230 (393)
T d1sq9a_ 156 FADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS----TLRPLYNFESQHSMINN 230 (393)
T ss_dssp SSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT----TTEEEEEEECCC---CC
T ss_pred CCcccceeeeeeccceecccceecccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeec----ccccccccccccccccc
Confidence 321110 002344568899999998 89999999999999775 233333 35679
Q ss_pred CCCCeeEEEeeCCCCEEEEeeCCCc---EEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccc
Q psy14906 294 SAPPNYIQFYGNSSDNILSAAGDST---LRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAR 370 (583)
Q Consensus 294 ~~~v~~~~~~~~~~~~l~~~~~dg~---i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (583)
..+|.+++|+| ++++|++++.|++ |++||+++++....+......
T Consensus 231 ~~~V~~l~~sp-dg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~------------------------------- 278 (393)
T d1sq9a_ 231 SNSIRSVKFSP-QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHS------------------------------- 278 (393)
T ss_dssp CCCEEEEEECS-STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC----------------------------------
T ss_pred cceEEEccccc-ccceeeeecCCCCcceeeecccccceeeeeecccccc-------------------------------
Confidence 99999999998 8999999998874 899999988776655221110
Q ss_pred ccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcccccc
Q psy14906 371 EKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY 450 (583)
Q Consensus 371 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 450 (583)
.........|...|++++|+|++++|++++.|+.|++||+.+++++..+
T Consensus 279 -------------------------------~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l 327 (393)
T d1sq9a_ 279 -------------------------------SQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTL 327 (393)
T ss_dssp ------------------------------------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred -------------------------------ccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEE
Confidence 0011122335578999999999999999999999999999999999998
Q ss_pred CCCCCCCcccCee----EEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceE
Q psy14906 451 GHDNQPGHVGGVR----GVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTV 526 (583)
Q Consensus 451 ~~~~~~~h~~~v~----~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 526 (583)
.+|...|. .++|+|++..+++++. ..++.+... ... .......+.+++++.|+.|
T Consensus 328 -----~gH~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~-----------~~~~~~~~~~~~~~~d~~i 386 (393)
T d1sq9a_ 328 -----NMHCDDIEIEEDILAVDEHGDSLAEPGV---FDVKFLKKG--WRS-----------GMGADLNESLCCVCLDRSI 386 (393)
T ss_dssp -----ECCGGGCSSGGGCCCBCTTSCBCSSCCE---EEEEEECTT--TSB-----------STTCTTSCEEEEEETTTEE
T ss_pred -----CCcCCcccCCccEEEECCCCCEEEEccc---ceEEECccC--cee-----------ccccCCCCEEEEEEcCCeE
Confidence 79998886 4889999988775542 223323222 100 0001224568889999999
Q ss_pred EEEEc
Q psy14906 527 NIIDI 531 (583)
Q Consensus 527 ~i~d~ 531 (583)
++|.-
T Consensus 387 r~~~~ 391 (393)
T d1sq9a_ 387 RWFRE 391 (393)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 99963
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=100.00 E-value=9.4e-32 Score=257.23 Aligned_cols=359 Identities=10% Similarity=-0.005 Sum_probs=260.2
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCcee
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESL 197 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~ 197 (583)
+++.-++++.+.+|+|.|||.++++.+.++. .+ ..+..++|||||++|++++.|+.+++||+.+++..
T Consensus 29 ~~~~~~~v~~~d~g~v~v~D~~t~~v~~~~~-----------~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~ 96 (432)
T d1qksa2 29 DLENLFSVTLRDAGQIALIDGSTYEIKTVLD-----------TG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT 96 (432)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEE-----------CS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC
T ss_pred CCCcEEEEEEcCCCEEEEEECCCCcEEEEEe-----------CC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCce
Confidence 3333456888999999999999999999997 44 46899999999999999999999999999887643
Q ss_pred --EEEe---ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhh----------hccccceEEEEEecCCCE
Q psy14906 198 --MEFI---QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK----------KAHRKVVTGAHFLYNEPL 262 (583)
Q Consensus 198 --~~~~---~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~----------~~~~~~v~~~~~~~~~~~ 262 (583)
.++. .|.+.+.+..|+|||+++++++..++.+++||..+++++..+. ..+......+.++|++..
T Consensus 97 ~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~ 176 (432)
T d1qksa2 97 TVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPE 176 (432)
T ss_dssp EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSE
T ss_pred EEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCE
Confidence 3332 4556667778889999666888899999999999988776551 123456678899999987
Q ss_pred E-EEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC-CCcEEEEEccccccceeeccchhhh
Q psy14906 263 L-VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFNTKSETSNKNLGIASANR 340 (583)
Q Consensus 263 l-~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~ 340 (583)
+ ++...++.+.+|+.. +.....+..+ .+...+..++|+| +++++++++. ++.+.++|..+.+....+.....
T Consensus 177 ~~vs~~~~~~i~~~d~~--~~~~~~~~~i-~~g~~~~~~~~sp-dg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~-- 250 (432)
T d1qksa2 177 FIVNVKETGKILLVDYT--DLNNLKTTEI-SAERFLHDGGLDG-SHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQ-- 250 (432)
T ss_dssp EEEEETTTTEEEEEETT--CSSEEEEEEE-ECCSSEEEEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS--
T ss_pred EEEEEccCCeEEEEEcc--CCCcceEEEE-cccCccccceECC-CCCEEEEeccccceEEEeecccceEEEEeccCcc--
Confidence 5 455667999999654 2222222333 2445678999998 7887777665 56788889887665443321110
Q ss_pred hhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEE
Q psy14906 341 NNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYI 420 (583)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 420 (583)
..+........+
T Consensus 251 --------------------------------------------------------------------~~~~~~~~~~~~ 262 (432)
T d1qksa2 251 --------------------------------------------------------------------TPHPGRGANFVH 262 (432)
T ss_dssp --------------------------------------------------------------------SBCCTTCEEEEE
T ss_pred --------------------------------------------------------------------ccccCcccceec
Confidence 000022233333
Q ss_pred ccCCcEEEEEe-cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEe
Q psy14906 421 THCGNFVLIGY-SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSI 499 (583)
Q Consensus 421 s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 499 (583)
...+...+... .++.|.+|+...... ..|...+....++|++..+++++.+...++|+.... ..
T Consensus 263 ~~~g~~~~~~~lg~~~v~~~~~~~~~~---------~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~--~~---- 327 (432)
T d1qksa2 263 PTFGPVWATSHMGDDSVALIGTDPEGH---------PDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATL--NP---- 327 (432)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTC---------TTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTT--CS----
T ss_pred CCCCceecccccCCceEEecccccccc---------cccccEEEEEEEcCCCCeEEEEecCCccceeecccC--CC----
Confidence 43444444332 377888887654322 467788999999999999999999999999987654 21
Q ss_pred eccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEe-----CCCeEEEEeCC
Q psy14906 500 KLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITAS-----MDCTIRVWDIP 574 (583)
Q Consensus 500 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~-----~d~~i~vw~~~ 574 (583)
+......+++ ||++.+++++.|+.+++|++.++..+ ..|...|.+++|||||++|+.+. .++.|+|||..
T Consensus 328 -~~~~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~~l---~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~ 402 (432)
T d1qksa2 328 -EAEISGSVAV-FDIKAMTGDGSDPEFKTLPIAEWAGI---TEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDK 402 (432)
T ss_dssp -SHHHHTCEEE-EEGGGCCCSSSCCCEEEECHHHHHTC---CSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETT
T ss_pred -CCCeeeEEEE-EechhhcccccCCceEeccccccccc---CCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECC
Confidence 1122334554 99999999999999999999776433 45778899999999999886553 46899999999
Q ss_pred Cccccccc
Q psy14906 575 SSQLIDCF 582 (583)
Q Consensus 575 ~~~~~~~~ 582 (583)
|+++.+.+
T Consensus 403 T~k~~~~i 410 (432)
T d1qksa2 403 TLELKHVI 410 (432)
T ss_dssp TTEEEEEE
T ss_pred CceEEeEe
Confidence 99987654
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=100.00 E-value=3.5e-31 Score=253.26 Aligned_cols=350 Identities=11% Similarity=0.055 Sum_probs=253.6
Q ss_pred EEEEEcCCeEEEEec-cceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcE--EEEeeccCCceEEecc
Q psy14906 85 HIYTSANNIIYAWRR-GIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEET--YLELSFDNDTFKIMGK 159 (583)
Q Consensus 85 ~~~~~~~~~i~vw~~-~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~ 159 (583)
+++.+.+++|.|||. .++++..+..|. .+..+ ||||++|++++.|++|++||+.+++. ..++... .
T Consensus 35 ~v~~~d~g~v~v~D~~t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~--------~ 105 (432)
T d1qksa2 35 SVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG--------S 105 (432)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC--------S
T ss_pred EEEEcCCCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecC--------C
Confidence 456678889999996 467888887764 45654 99999999999999999999988763 3343311 1
Q ss_pred cCCcceEEEeeCCCCCEE-EEEecCCeEEEEEccCCceeEEEecc-----------CCCeEEEEEecCCCCEEEEEcCCC
Q psy14906 160 RWNSCVNVLEPSPVVDII-GVGLSNKKIILHNILTDESLMEFIQT-----------WGPVTALSFRTDGPPMMVSGSNTG 227 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~~l~s~~~dg 227 (583)
.|.+.+.+.+|+|||++| ++++.++.|++||..+++.+..+..+ ......+.++|+++.++++...++
T Consensus 106 ~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~ 185 (432)
T d1qksa2 106 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 185 (432)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCC
Confidence 455677778899999986 67788999999999999998877643 345678899999986677888899
Q ss_pred cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeC-CCeEEEEEccCCCCCceeeEEecc-----CCCCCeeEE
Q psy14906 228 HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNGRLLRIREG-----HSAPPNYIQ 301 (583)
Q Consensus 228 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~~~~~~~~~-----~~~~v~~~~ 301 (583)
.|.+||..+.+........+...+..++|+|+|+++++++. ++.+.+++.+ ..+....... |........
T Consensus 186 ~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~----~~~~~~~~~~g~~~~~~~~~~~~~ 261 (432)
T d1qksa2 186 KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTK----EGKLVAIEDTGGQTPHPGRGANFV 261 (432)
T ss_dssp EEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETT----TTEEEEEEECSSSSBCCTTCEEEE
T ss_pred eEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecc----cceEEEEeccCccccccCccccee
Confidence 99999998876544332245677899999999998777765 4577888654 3344433321 223333333
Q ss_pred EeeCCCCEEEEee-CCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEE
Q psy14906 302 FYGNSSDNILSAA-GDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAI 380 (583)
Q Consensus 302 ~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (583)
+. ..+....+.. .++.+.+|+.......
T Consensus 262 ~~-~~g~~~~~~~lg~~~v~~~~~~~~~~~-------------------------------------------------- 290 (432)
T d1qksa2 262 HP-TFGPVWATSHMGDDSVALIGTDPEGHP-------------------------------------------------- 290 (432)
T ss_dssp ET-TTEEEEEEEBSSSSEEEEEECCTTTCT--------------------------------------------------
T ss_pred cC-CCCceecccccCCceEEeccccccccc--------------------------------------------------
Confidence 32 2333333332 3667777765432210
Q ss_pred ecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCccc
Q psy14906 381 HTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVG 460 (583)
Q Consensus 381 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~ 460 (583)
.+...+....++|++..+++++.+...++|+..+. ..|..
T Consensus 291 -----------------------------~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~-----------~~~~~ 330 (432)
T d1qksa2 291 -----------------------------DNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATL-----------NPEAE 330 (432)
T ss_dssp -----------------------------TTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTT-----------CSSHH
T ss_pred -----------------------------ccccEEEEEEEcCCCCeEEEEecCCccceeecccC-----------CCCCC
Confidence 01145778889999999999999999999986543 34444
Q ss_pred CeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEe-----CCceEEEEEccccc
Q psy14906 461 GVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCL-----DDFTVNIIDIDTCT 535 (583)
Q Consensus 461 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-----~dg~i~i~d~~~~~ 535 (583)
...++++ ||++.+++++.|+.+++|++.+. ..+ .+++..+.+++|||||++++++. .+|.|.|||.++++
T Consensus 331 ~~~sv~v-pDg~~la~~s~d~~~k~w~~~~~--~~l--~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k 405 (432)
T d1qksa2 331 ISGSVAV-FDIKAMTGDGSDPEFKTLPIAEW--AGI--TEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 405 (432)
T ss_dssp HHTCEEE-EEGGGCCCSSSCCCEEEECHHHH--HTC--CSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred eeeEEEE-EechhhcccccCCceEecccccc--ccc--CCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCce
Confidence 4455665 89999999999999999998754 222 24566788999999999886654 46899999999999
Q ss_pred eEEeeccc
Q psy14906 536 IIRKLSGH 543 (583)
Q Consensus 536 ~~~~~~~h 543 (583)
+...+++.
T Consensus 406 ~~~~i~~~ 413 (432)
T d1qksa2 406 LKHVIKDE 413 (432)
T ss_dssp EEEEECCT
T ss_pred EEeEecCC
Confidence 98888753
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=4.7e-30 Score=246.47 Aligned_cols=335 Identities=9% Similarity=0.051 Sum_probs=229.4
Q ss_pred CEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEE-
Q psy14906 122 PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEF- 200 (583)
Q Consensus 122 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~- 200 (583)
-++++.+.||+|+|||+.+++.+.++. .+ ..+..++|||||++|++++.|++|++||+.+++.....
T Consensus 33 ~~~V~~~~dg~v~vwD~~t~~~~~~l~-----------~g-~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~ 100 (426)
T d1hzua2 33 LFSVTLRDAGQIALVDGDSKKIVKVID-----------TG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE 100 (426)
T ss_dssp EEEEEETTTTEEEEEETTTCSEEEEEE-----------CC-SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred EEEEEEcCCCEEEEEECCCCcEEEEEe-----------CC-CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEE
Confidence 356778889999999999999999997 44 45899999999999999999999999999988754432
Q ss_pred -e---ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhcccc-----------ceEEEEEecCCCEEEE
Q psy14906 201 -I---QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRK-----------VVTGAHFLYNEPLLVT 265 (583)
Q Consensus 201 -~---~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~l~s 265 (583)
. +|...+.+++|+|||+++++++..++.+++||..++++...+ ..|.. ....+.+++++..++.
T Consensus 101 i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~ 179 (426)
T d1hzua2 101 IKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIV-STRGMTVDTQTYHPEPRVAAIIASHEHPEFIV 179 (426)
T ss_dssp EECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEE-ECCEECSSSCCEESCCCEEEEEECSSSSEEEE
T ss_pred EeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEe-eccCCCccceeecCCCceeEEEECCCCCEEEE
Confidence 2 455667778888999955666778999999999998877665 44443 3445556666665554
Q ss_pred EeCC-CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEee-CCCcEEEEEccccccceeeccchhhhhhh
Q psy14906 266 SSPD-NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAA-GDSTLRIFNTKSETSNKNLGIASANRNNL 343 (583)
Q Consensus 266 ~~~d-~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 343 (583)
...+ +.+.+++. .... ........+...+..+.|+| ++++++++. .+..+.+++..+++...........
T Consensus 180 ~~~~~~~i~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~-~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 251 (426)
T d1hzua2 180 NVKETGKVLLVNY--KDID-NLTVTSIGAAPFLADGGWDS-SHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTP---- 251 (426)
T ss_dssp EETTTTEEEEEEC--SSSS-SCEEEEEECCSSEEEEEECT-TSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCC----
T ss_pred ecCCCCeEEEEEe--cccc-ceeeEEeccCCccEeeeECC-CCcEEEeeeecccceeeeecccccEEEEeccCCcc----
Confidence 4433 44444432 2111 11223345677788999998 677666655 5677889999887665443211000
Q ss_pred hhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC
Q psy14906 344 KRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC 423 (583)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 423 (583)
.......+.+.
T Consensus 252 ---------------------------------------------------------------------~~~~~~~~~~~ 262 (426)
T d1hzua2 252 ---------------------------------------------------------------------HPGRGANFVHP 262 (426)
T ss_dssp ---------------------------------------------------------------------CCSCCEEEEET
T ss_pred ---------------------------------------------------------------------cccceeeeecC
Confidence 00111111111
Q ss_pred C--cE-EEEEecCceEEEEEccc-------CccccccCCCCCCCcccCeeEEEEeCCCcEEEE-------eecCCcEEEE
Q psy14906 424 G--NF-VLIGYSSGHVDRFNIQS-------GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVIS-------GGNDQTVKVW 486 (583)
Q Consensus 424 ~--~~-l~~~~~dg~i~i~d~~~-------~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s-------~~~dg~i~iw 486 (583)
+ .. .+....++.+.+|+... ++....+ .+|...+..++|+||+++|++ ++.|++|++|
T Consensus 263 ~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l-----~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vw 337 (426)
T d1hzua2 263 KYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL-----QGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVF 337 (426)
T ss_dssp TTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEE-----ECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEE
T ss_pred CCCceEEeccCCCceEEEeeccccccccccceEeEEE-----ecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEE
Confidence 1 11 11222345555555433 3445555 689999999999999999994 5678899999
Q ss_pred EccCCCCCceEEe----------eccCCeeeEEeccCCcEEEEE-----eCCceEEEEEccccceEEeecccccceeeEE
Q psy14906 487 HFKQTGKPPLRSI----------KLDNGISFFRTHQESSMLAVC-----LDDFTVNIIDIDTCTIIRKLSGHMGQLTDAD 551 (583)
Q Consensus 487 d~~~~~~~~~~~~----------~~~~~v~~~~~s~~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~ 551 (583)
|+.++ +....+ .+...+.+++|||||+++++. +.++.|+|||.+++++...++++. .
T Consensus 338 d~~t~--~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~~~~------~ 409 (426)
T d1hzua2 338 DLKNL--DAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPR------L 409 (426)
T ss_dssp ETTCT--TSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEECCTT------C
T ss_pred ECCCC--CcCeEEeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEECCCC------c
Confidence 99988 554433 233468899999999977543 357899999999999999988764 3
Q ss_pred ecCCCcEE
Q psy14906 552 FSPDSRWL 559 (583)
Q Consensus 552 ~s~d~~~l 559 (583)
++|+|+|-
T Consensus 410 ~tp~Gk~~ 417 (426)
T d1hzua2 410 ITPTGKFN 417 (426)
T ss_dssp CSEEEEEE
T ss_pred cCCCceEe
Confidence 46777764
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=2e-29 Score=242.13 Aligned_cols=342 Identities=10% Similarity=0.021 Sum_probs=237.0
Q ss_pred eeCCCCC--EEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhh--h-
Q psy14906 169 EPSPVVD--IIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ--I- 243 (583)
Q Consensus 169 ~~s~~~~--~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--~- 243 (583)
.++.|.+ ++++.+.||+|++||+.+++.+.++..+ ..+..++|+|||+ +|++++.|+++++||+.+++.... +
T Consensus 25 ~~~~d~~~~~~V~~~~dg~v~vwD~~t~~~~~~l~~g-~~~~~vafSPDGk-~l~~~~~d~~v~vwd~~t~~~~~~~~i~ 102 (426)
T d1hzua2 25 LNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGR-YLLVIGRDARIDMIDLWAKEPTKVAEIK 102 (426)
T ss_dssp CSCCCGGGEEEEEETTTTEEEEEETTTCSEEEEEECC-SSEEEEEECTTSC-EEEEEETTSEEEEEETTSSSCEEEEEEE
T ss_pred cccCCCCeEEEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEECCCCC-EEEEEeCCCCEEEEEccCCceeEEEEEe
Confidence 3555533 5577888999999999999999999988 5799999999999 889999999999999998864322 2
Q ss_pred -hhccccceEEEEEecCCCEEEE-EeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEE
Q psy14906 244 -KKAHRKVVTGAHFLYNEPLLVT-SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRI 321 (583)
Q Consensus 244 -~~~~~~~v~~~~~~~~~~~l~s-~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 321 (583)
..+|...+.+++|+|||+++++ +..++.+++||.. ..........|...+....+.+......+..+.|+...+
T Consensus 103 ~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~ 178 (426)
T d1hzua2 103 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE----TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 178 (426)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT----TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred CCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCC----ccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEE
Confidence 1356677778888999998755 4578999999665 456677777777777777777633335566667777666
Q ss_pred EEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCccccccee
Q psy14906 322 FNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMF 401 (583)
Q Consensus 322 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 401 (583)
+....... +.+++..........
T Consensus 179 ~~~~~~~~---------------------------------------------------------i~~~~~~~~~~~~~~ 201 (426)
T d1hzua2 179 VNVKETGK---------------------------------------------------------VLLVNYKDIDNLTVT 201 (426)
T ss_dssp EEETTTTE---------------------------------------------------------EEEEECSSSSSCEEE
T ss_pred EecCCCCe---------------------------------------------------------EEEEEeccccceeeE
Confidence 65543221 111111111100000
Q ss_pred eecccccccCCCCceEEEEccCCcEEEEEe-cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc---EEEEe
Q psy14906 402 LVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ---IVISG 477 (583)
Q Consensus 402 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~---~l~s~ 477 (583)
.. .....+..+.++|++++++++. .+..+.+++..+++........ .+........+...+. ..+..
T Consensus 202 ~~------~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 272 (426)
T d1hzua2 202 SI------GAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVG---KTPHPGRGANFVHPKYGPVWSTSH 272 (426)
T ss_dssp EE------ECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECS---SCCCCSCCEEEEETTTEEEEEEEC
T ss_pred Ee------ccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccC---CcccccceeeeecCCCCceEEecc
Confidence 00 1115678899999999887776 4567899999998887665321 2222233344333332 22344
Q ss_pred ecCCcEEEEEccCCCC-----CceEEeec-cCCeeeEEeccCCcEEEE-------EeCCceEEEEEccccceEEee----
Q psy14906 478 GNDQTVKVWHFKQTGK-----PPLRSIKL-DNGISFFRTHQESSMLAV-------CLDDFTVNIIDIDTCTIIRKL---- 540 (583)
Q Consensus 478 ~~dg~i~iwd~~~~~~-----~~~~~~~~-~~~v~~~~~s~~~~~l~~-------~~~dg~i~i~d~~~~~~~~~~---- 540 (583)
+.|+.+.+|+...... +....+.. ...+..++|+||+++|++ +..+++|++||+++++...++
T Consensus 273 ~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~ 352 (426)
T d1hzua2 273 LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIA 352 (426)
T ss_dssp TTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHH
T ss_pred CCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccc
Confidence 5678888887654321 33445554 457999999999999995 445789999999998766543
Q ss_pred -----cccccceeeEEecCCCcEEE-EE----eCCCeEEEEeCCCccccccc
Q psy14906 541 -----SGHMGQLTDADFSPDSRWLI-TA----SMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 541 -----~~h~~~v~~l~~s~d~~~l~-s~----~~d~~i~vw~~~~~~~~~~~ 582 (583)
..|...|.+++|||||++++ ++ +.|+.|+|||..|+++++.+
T Consensus 353 ~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i 404 (426)
T d1hzua2 353 EWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVV 404 (426)
T ss_dssp HHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEE
T ss_pred hhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCeEEEEE
Confidence 24566799999999999774 32 46889999999999987654
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.96 E-value=1.6e-26 Score=211.35 Aligned_cols=272 Identities=15% Similarity=0.158 Sum_probs=215.5
Q ss_pred CEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEE-EEeCCCeEEEEEccCCCCCceeeEEeccCCCC
Q psy14906 218 PMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV-TSSPDNTLKLWIFDKADGNGRLLRIREGHSAP 296 (583)
Q Consensus 218 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~ 296 (583)
+.+++++.|++|.+||+++++.+.++. ....+..++|+|||++|+ +++.++.|++||+. ..+.+..+..+. .
T Consensus 3 ~~yV~~~~~~~v~v~D~~t~~~~~~i~--~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~----t~~~~~~~~~~~-~ 75 (301)
T d1l0qa2 3 FAYIANSESDNISVIDVTSNKVTATIP--VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTA----TNNVIATVPAGS-S 75 (301)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETT----TTEEEEEEECSS-S
T ss_pred EEEEEECCCCEEEEEECCCCeEEEEEE--CCCCceEEEEeCCCCEEEEEECCCCEEEEEECC----CCceeeeeeccc-c
Confidence 356678889999999999999998882 345678999999999874 66678999999765 566777777665 4
Q ss_pred CeeEEEeeCCCCE-EEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccc
Q psy14906 297 PNYIQFYGNSSDN-ILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWN 375 (583)
Q Consensus 297 v~~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (583)
+..+.+++ ++.. ++++..++.+.+|+..+++....+...
T Consensus 76 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------- 115 (301)
T d1l0qa2 76 PQGVAVSP-DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG--------------------------------------- 115 (301)
T ss_dssp EEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECS---------------------------------------
T ss_pred cccccccc-ccccccccccccceeeecccccceeeeecccc---------------------------------------
Confidence 58899997 5654 555667788999998877654433111
Q ss_pred cEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEE-EecCceEEEEEcccCccccccCCCC
Q psy14906 376 NIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLI-GYSSGHVDRFNIQSGAHRGSYGHDN 454 (583)
Q Consensus 376 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~ 454 (583)
....+++++|+++.+++ +..++.+.+|+..++.....+
T Consensus 116 -------------------------------------~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 154 (301)
T d1l0qa2 116 -------------------------------------KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV---- 154 (301)
T ss_dssp -------------------------------------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE----
T ss_pred -------------------------------------ccceEEEeecCCCeeeeeeccccceeeeeccccceeeec----
Confidence 45678999999987755 556788999999999888776
Q ss_pred CCCcccCeeEEEEeCCCcEEEEeecC-CcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeC---CceEEEEE
Q psy14906 455 QPGHVGGVRGVVSDNLNQIVISGGND-QTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLD---DFTVNIID 530 (583)
Q Consensus 455 ~~~h~~~v~~~~~s~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~i~d 530 (583)
.+...+..++++|+++.+++++.+ +.+.+|+.... ...........+..+++++++..++++.. ++.|++||
T Consensus 155 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D 230 (301)
T d1l0qa2 155 --SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN--SVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMID 230 (301)
T ss_dssp --ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--EEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEE
T ss_pred --ccCCCceEEEeeccccceeeecccccccccccccce--eeeecccccCCcceeeccccccccccccccceeeeeeeee
Confidence 344568899999999988777655 56777777766 66777777788899999999998876643 46899999
Q ss_pred ccccceEEeecccccceeeEEecCCCcEE-EEEeCCCeEEEEeCCCccccccc
Q psy14906 531 IDTCTIIRKLSGHMGQLTDADFSPDSRWL-ITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 531 ~~~~~~~~~~~~h~~~v~~l~~s~d~~~l-~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
+.+++.+..+..+ ..+.+++|+|||++| ++++.|++|++||++++++++++
T Consensus 231 ~~t~~~~~~~~~~-~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~ 282 (301)
T d1l0qa2 231 TGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282 (301)
T ss_dssp TTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCCCeEEEEEcCC-CCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence 9999998888754 568999999999987 57778999999999999998775
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.95 E-value=1.1e-26 Score=216.13 Aligned_cols=300 Identities=8% Similarity=-0.016 Sum_probs=219.7
Q ss_pred CEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEE-EEEecCCeEEEEEccCCceeEEE
Q psy14906 122 PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDII-GVGLSNKKIILHNILTDESLMEF 200 (583)
Q Consensus 122 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~d~~i~iw~~~~~~~~~~~ 200 (583)
+|+++++.|++|++||+++++.+.++... .+...+.+++|+|||++| ++++.++.|.+||+.+++.+..+
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~---------~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~ 72 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIA---------DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRI 72 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECT---------TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECC---------CCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEE
Confidence 58999999999999999999999998743 345667899999999987 46678899999999999999888
Q ss_pred eccC-----CCeEEEEEecCCCCEEEEEc------------CCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEE
Q psy14906 201 IQTW-----GPVTALSFRTDGPPMMVSGS------------NTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLL 263 (583)
Q Consensus 201 ~~~~-----~~v~~~~~~~~~~~~l~s~~------------~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 263 (583)
..+. ..+..++|+|+++ .++++. .+..+.+||..+++....+ .+...+..++|+|+|+++
T Consensus 73 ~~~~~~~~~~~~~~v~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~~~~~~~~s~dg~~l 149 (337)
T d1pbyb_ 73 DLSTPEERVKSLFGAALSPDGK-TLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF--EAPRQITMLAWARDGSKL 149 (337)
T ss_dssp ECCBTTEEEECTTCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE--ECCSSCCCEEECTTSSCE
T ss_pred ecCCCcccccceeeEEEcCCCc-EEEEeecCCcceeeeccccccceeeccccCCeEEEec--cccCCceEEEEcCCCCEE
Confidence 7553 2456789999999 565554 3578999999999988877 345678899999999999
Q ss_pred EEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEe-eCCCcEEEEEccccccceeeccchhhhhh
Q psy14906 264 VTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSA-AGDSTLRIFNTKSETSNKNLGIASANRNN 342 (583)
Q Consensus 264 ~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 342 (583)
++++.+ +.+||.. .......+..+... ....+.| ++..+... ...+....++...
T Consensus 150 ~~~~~~--~~~~d~~----~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------------- 205 (337)
T d1pbyb_ 150 YGLGRD--LHVMDPE----AGTLVEDKPIQSWE-AETYAQP-DVLAVWNQHESSGVMATPFYTA---------------- 205 (337)
T ss_dssp EEESSS--EEEEETT----TTEEEEEECSTTTT-TTTBCCC-BCCCCCCCCTTTTEEEEEEEEE----------------
T ss_pred EEEcCC--cceeeee----cCcEEEEeecCCcc-ccceecC-Ccceeeccccccceeeeeeeee----------------
Confidence 998754 6788654 34555555443322 2233333 33222222 2222222222110
Q ss_pred hhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc
Q psy14906 343 LKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH 422 (583)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 422 (583)
..
T Consensus 206 ------------------------------------------------------------------------------~~ 207 (337)
T d1pbyb_ 206 ------------------------------------------------------------------------------RK 207 (337)
T ss_dssp ------------------------------------------------------------------------------BT
T ss_pred ------------------------------------------------------------------------------ee
Confidence 11
Q ss_pred CCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeecc
Q psy14906 423 CGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLD 502 (583)
Q Consensus 423 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 502 (583)
+......+..++.+.+|+..++....... ..+...+..++++|++.+++.+ ++.+++||+.+. +.+..+...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~--~~~~~~~~~ 279 (337)
T d1pbyb_ 208 DIDPADPTAYRTGLLTMDLETGEMAMREV----RIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN--ASIKRVPLP 279 (337)
T ss_dssp TSCTTSGGGEEEEEEEEETTTCCEEEEEE----EECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT--EEEEEEECS
T ss_pred ccceeeecccCccEEEEEcCCCcEEEEEe----cCCCcceEEEEecccceEEEEc--cccEEEEECCCC--cEEEEEcCC
Confidence 11111222345567888887776544321 3567788899999999988766 578999999998 888888888
Q ss_pred CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeeccc
Q psy14906 503 NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGH 543 (583)
Q Consensus 503 ~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h 543 (583)
..+.+++|+|||++|++++.+++|++||.++++.+.+++-+
T Consensus 280 ~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~~ 320 (337)
T d1pbyb_ 280 HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEECC
Confidence 89999999999999999999999999999999999887643
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.95 E-value=1.8e-25 Score=204.16 Aligned_cols=273 Identities=12% Similarity=0.114 Sum_probs=211.9
Q ss_pred EEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEE-EEecCCeEEEEEccCCceeEEEeccC
Q psy14906 126 SVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIG-VGLSNKKIILHNILTDESLMEFIQTW 204 (583)
Q Consensus 126 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~d~~i~iw~~~~~~~~~~~~~~~ 204 (583)
+.+.|++|.+||+++++.+.+++. ...+..++|+|||++|+ ++..++.|++||+.+++.+..+..+
T Consensus 7 ~~~~~~~v~v~D~~t~~~~~~i~~------------g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~- 73 (301)
T d1l0qa2 7 ANSESDNISVIDVTSNKVTATIPV------------GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG- 73 (301)
T ss_dssp EETTTTEEEEEETTTTEEEEEEEC------------SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-
T ss_pred EECCCCEEEEEECCCCeEEEEEEC------------CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeecc-
Confidence 456789999999999999998862 34578999999999875 5667899999999999999999888
Q ss_pred CCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEE-EEeCCCeEEEEEccCCCCC
Q psy14906 205 GPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLV-TSSPDNTLKLWIFDKADGN 283 (583)
Q Consensus 205 ~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~i~~w~~~~~~~~ 283 (583)
..+..++|++++..+++++..++.+.+|+..+++....+ .+.....++.|+|++..++ ++..++.+.+|+.. .
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~----~ 147 (301)
T d1l0qa2 74 SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV--KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTV----T 147 (301)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE--ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETT----T
T ss_pred ccccccccccccccccccccccceeeecccccceeeeec--cccccceEEEeecCCCeeeeeeccccceeeeecc----c
Confidence 567899999999967777888899999999999888877 3556778899999998775 45567889999654 4
Q ss_pred ceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC-CcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccc
Q psy14906 284 GRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD-STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVS 362 (583)
Q Consensus 284 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (583)
......+..+ ..+..+.++| ++..++++..+ +.+.+|+............
T Consensus 148 ~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 198 (301)
T d1l0qa2 148 KAVINTVSVG-RSPKGIAVTP-DGTKVYVANFDSMSISVIDTVTNSVIDTVKV--------------------------- 198 (301)
T ss_dssp TEEEEEEECC-SSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEEC---------------------------
T ss_pred cceeeecccC-CCceEEEeec-cccceeeecccccccccccccceeeeecccc---------------------------
Confidence 4555555543 4568899997 67777766654 5566676655433222100
Q ss_pred eeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec---CceEEEE
Q psy14906 363 QFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS---SGHVDRF 439 (583)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~i~i~ 439 (583)
...+..++++++++.++++.. ++.|++|
T Consensus 199 -------------------------------------------------~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~ 229 (301)
T d1l0qa2 199 -------------------------------------------------EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (301)
T ss_dssp -------------------------------------------------SSEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred -------------------------------------------------cCCcceeeccccccccccccccceeeeeeee
Confidence 034667899999998876643 4689999
Q ss_pred EcccCccccccCCCCCCCcccCeeEEEEeCCCcEE-EEeecCCcEEEEEccCCCCCceEEeeccC
Q psy14906 440 NIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIV-ISGGNDQTVKVWHFKQTGKPPLRSIKLDN 503 (583)
Q Consensus 440 d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 503 (583)
|+.+++....+ .+...+.+++|+|||++| ++++.|+.|++||++++ +++..+....
T Consensus 230 D~~t~~~~~~~------~~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~--~~~~~~~vg~ 286 (301)
T d1l0qa2 230 DTGTNKITARI------PVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATN--TITATMAVGK 286 (301)
T ss_dssp ETTTTEEEEEE------ECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--EEEEEEECSS
T ss_pred ecCCCeEEEEE------cCCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCC--eEEEEEeCCC
Confidence 99999988776 234568999999999976 57778999999999998 7777776543
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.95 E-value=4.3e-27 Score=219.75 Aligned_cols=307 Identities=6% Similarity=-0.066 Sum_probs=213.5
Q ss_pred EeeCCCCCEEEEEecCCeEEEEEccCCceeEEEe-ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhh-
Q psy14906 168 LEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI-QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKK- 245 (583)
Q Consensus 168 ~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~- 245 (583)
++|++++++|++++.+++|.+||+++++.+.++. .+...+.+++|+|||+++++++..++.|.+||+.+++.+..+..
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~~~ 81 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 81 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeeccc
Confidence 5799999999999999999999999999999887 44567889999999996667788899999999999988765521
Q ss_pred ----ccccceEEEEEecCCCEEEEEe------------CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCE
Q psy14906 246 ----AHRKVVTGAHFLYNEPLLVTSS------------PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDN 309 (583)
Q Consensus 246 ----~~~~~v~~~~~~~~~~~l~s~~------------~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 309 (583)
.+...+..++|+|||+++++++ .+..+.+|+...... ...+... .....+..+.+++ ++..
T Consensus 82 ~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~-~~~~ 158 (346)
T d1jmxb_ 82 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE-AKPVRTF-PMPRQVYLMRAAD-DGSL 158 (346)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG-BCCSEEE-ECCSSCCCEEECT-TSCE
T ss_pred ccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEeccccee-eeEEEee-eccCceEEEEecC-CCEE
Confidence 1223466899999999988775 466778886543211 1111111 1223445555553 5544
Q ss_pred EEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEE
Q psy14906 310 ILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSL 389 (583)
Q Consensus 310 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 389 (583)
+++ + +.+.+|++.+++....+...
T Consensus 159 ~~~-~--~~~~~~~~~~~~~~~~~~~~----------------------------------------------------- 182 (346)
T d1jmxb_ 159 YVA-G--PDIYKMDVKTGKYTVALPLR----------------------------------------------------- 182 (346)
T ss_dssp EEE-S--SSEEEECTTTCCEEEEECST-----------------------------------------------------
T ss_pred EEe-C--CcceEEEccCCCEEEEEecC-----------------------------------------------------
Confidence 443 2 45788888776554433111
Q ss_pred eecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe-cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEe
Q psy14906 390 WSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSD 468 (583)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s 468 (583)
.....+.++|++..++... .++.+.+++.. ..+.
T Consensus 183 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~ 217 (346)
T d1jmxb_ 183 -----------------------NWNRKGYSAPDVLYFWPHQSPRHEFSMLYTI----------------------ARFK 217 (346)
T ss_dssp -----------------------TCCCTTBCCCBCCCCCCCCCTTCEEEEEEEE----------------------EEC-
T ss_pred -----------------------CCccceEEeccccEEEEEecCCCceEeeeee----------------------eeec
Confidence 1233344566665544332 33334433321 1222
Q ss_pred CCCcEEEEeecCCcEEEEEccCCCCCceE--EeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccc
Q psy14906 469 NLNQIVISGGNDQTVKVWHFKQTGKPPLR--SIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ 546 (583)
Q Consensus 469 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~ 546 (583)
+....++++..++.+.+|+..+. .... ...+...+..+.+++++.+++.... +.|.+||..+++.+..+. +...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~-~~~~ 293 (346)
T d1jmxb_ 218 DDKQDPATADLLYGYLSVDLKTG--KTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAAN-LDHT 293 (346)
T ss_dssp ------CCCEEEEEEEEEETTTC--CEEEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEE-CSSC
T ss_pred cCceeEeeccCCceEEEEECCCC--ceEEEEeecccceeEEEEEeCCCCEEEEecC-CeEEEEECCCCcEEEEEc-CCCC
Confidence 33445666677788999999887 4433 3345567888999999998887665 579999999999988776 4567
Q ss_pred eeeEEecCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 547 LTDADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 547 v~~l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
+.+++|+|||++|++++.|+.|++||+++++.++++
T Consensus 294 ~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i 329 (346)
T d1jmxb_ 294 YYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI 329 (346)
T ss_dssp CCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEE
Confidence 999999999999999999999999999999998875
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.95 E-value=4e-26 Score=213.15 Aligned_cols=309 Identities=9% Similarity=-0.020 Sum_probs=227.0
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEE-EEecCCeEEEEEccCCc
Q psy14906 117 ILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIG-VGLSNKKIILHNILTDE 195 (583)
Q Consensus 117 is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~d~~i~iw~~~~~~ 195 (583)
++++++||++++.+++|.+||+.+++.+.++.+ .+...+.+++|+|||++++ ++..++.|.+||+.+++
T Consensus 4 ~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~----------~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~ 73 (346)
T d1jmxb_ 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM----------PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 73 (346)
T ss_dssp CCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC----------SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred CCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEc----------CCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCe
Confidence 478999999999999999999999999998874 4456778999999999874 55678999999999999
Q ss_pred eeEEEeccC------CCeEEEEEecCCCCEEEEEc------------CCCcEEEEeCCCCeehhhhhhcc--ccceEEEE
Q psy14906 196 SLMEFIQTW------GPVTALSFRTDGPPMMVSGS------------NTGHLTVWNLEDRQVENQIKKAH--RKVVTGAH 255 (583)
Q Consensus 196 ~~~~~~~~~------~~v~~~~~~~~~~~~l~s~~------------~dg~i~vwd~~~~~~~~~~~~~~--~~~v~~~~ 255 (583)
.+..+.... ..+..++|+|||+ ++++++ .++.+.+|+..+++....+ ..+ ...+..+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~s~DG~-~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 151 (346)
T d1jmxb_ 74 NTFHANLSSVPGEVGRSMYSFAISPDGK-EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV-RTFPMPRQVYLMR 151 (346)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS-EEEECCSSCCCEE
T ss_pred eeeeecccccccccCCceEEEEEecCCC-EEEEEecCCcceeeeeccCcceEEEEecccceeeeEE-EeeeccCceEEEE
Confidence 988776432 2466899999999 555543 4678999999887766555 222 34566677
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEE-EEeeCCCcEEEEEccccccceeec
Q psy14906 256 FLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNI-LSAAGDSTLRIFNTKSETSNKNLG 334 (583)
Q Consensus 256 ~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~ 334 (583)
+++++.+++++ +.+.+|++. ..+.+..+..+. ....+.++| ++..+ +....++.+.+++...
T Consensus 152 ~~~~~~~~~~~---~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------- 214 (346)
T d1jmxb_ 152 AADDGSLYVAG---PDIYKMDVK----TGKYTVALPLRN-WNRKGYSAP-DVLYFWPHQSPRHEFSMLYTIA-------- 214 (346)
T ss_dssp ECTTSCEEEES---SSEEEECTT----TCCEEEEECSTT-CCCTTBCCC-BCCCCCCCCCTTCEEEEEEEEE--------
T ss_pred ecCCCEEEEeC---CcceEEEcc----CCCEEEEEecCC-CccceEEec-cccEEEEEecCCCceEeeeeee--------
Confidence 77777766543 457889553 455566665443 345666776 44444 3334445555544321
Q ss_pred cchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCC
Q psy14906 335 IASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSK 414 (583)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (583)
T Consensus 215 -------------------------------------------------------------------------------- 214 (346)
T d1jmxb_ 215 -------------------------------------------------------------------------------- 214 (346)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCC
Q psy14906 415 PTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP 494 (583)
Q Consensus 415 i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 494 (583)
.+.+....++.+..++.+.+|+..++....... ..|...+..+.+++++.+++.... +.+.+||..++ +
T Consensus 215 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~--~ 283 (346)
T d1jmxb_ 215 ----RFKDDKQDPATADLLYGYLSVDLKTGKTHTQEF----ADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQR--K 283 (346)
T ss_dssp ----EC-------CCCEEEEEEEEEETTTCCEEEEEE----EECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTT--E
T ss_pred ----eeccCceeEeeccCCceEEEEECCCCceEEEEe----ecccceeEEEEEeCCCCEEEEecC-CeEEEEECCCC--c
Confidence 111222334445556778899988877655432 467788999999999888877664 57999999998 8
Q ss_pred ceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeeccccc
Q psy14906 495 PLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMG 545 (583)
Q Consensus 495 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~ 545 (583)
.+..+.....+.+++|+|||++|++++.|+.|++||+++++.+.+++.+.+
T Consensus 284 ~~~~~~~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~~i~~p~g 334 (346)
T d1jmxb_ 284 LIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGG 334 (346)
T ss_dssp EEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSSS
T ss_pred EEEEEcCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEEEEECCCC
Confidence 888888888999999999999999999999999999999999988885443
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.94 E-value=6e-26 Score=211.05 Aligned_cols=294 Identities=10% Similarity=-0.018 Sum_probs=209.8
Q ss_pred CEEEEEecCCeEEEEEccCCceeEEEecc--CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhcc-----
Q psy14906 175 DIIGVGLSNKKIILHNILTDESLMEFIQT--WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAH----- 247 (583)
Q Consensus 175 ~~l~~~~~d~~i~iw~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~----- 247 (583)
+++++++.|++|.+||+++++.+.++..+ ...+.+++|+|||++++++++.++.|.+||+.+++.+..+ ..+
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~-~~~~~~~~ 80 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRI-DLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEE-ECCBTTEE
T ss_pred eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEE-ecCCCccc
Confidence 57999999999999999999999988743 3567899999999955577888999999999999888766 333
Q ss_pred ccceEEEEEecCCCEEEEEe------------CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC
Q psy14906 248 RKVVTGAHFLYNEPLLVTSS------------PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 248 ~~~v~~~~~~~~~~~l~s~~------------~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 315 (583)
...+..++|+|++++++++. .+..+.+|+.. .......+.. ...+..++|+| +++++++++.
T Consensus 81 ~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~~~ 154 (337)
T d1pbyb_ 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE----TLSRRKAFEA-PRQITMLAWAR-DGSKLYGLGR 154 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETT----TTEEEEEEEC-CSSCCCEEECT-TSSCEEEESS
T ss_pred ccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeecccc----CCeEEEeccc-cCCceEEEEcC-CCCEEEEEcC
Confidence 23456799999999998876 35677788554 3455555553 45678999997 8999988865
Q ss_pred CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcc
Q psy14906 316 DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKS 395 (583)
Q Consensus 316 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 395 (583)
.+.+||..+++....+.....
T Consensus 155 --~~~~~d~~~~~~~~~~~~~~~--------------------------------------------------------- 175 (337)
T d1pbyb_ 155 --DLHVMDPEAGTLVEDKPIQSW--------------------------------------------------------- 175 (337)
T ss_dssp --SEEEEETTTTEEEEEECSTTT---------------------------------------------------------
T ss_pred --CcceeeeecCcEEEEeecCCc---------------------------------------------------------
Confidence 477899887765544322110
Q ss_pred cccceeeecccccccCCCCceEEEEccCCcEEEEEe-cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEE
Q psy14906 396 KMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY-SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIV 474 (583)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l 474 (583)
.....+.|++..+.... ..+... ........+....
T Consensus 176 -------------------~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~ 212 (337)
T d1pbyb_ 176 -------------------EAETYAQPDVLAVWNQHESSGVMA------------------------TPFYTARKDIDPA 212 (337)
T ss_dssp -------------------TTTTBCCCBCCCCCCCCTTTTEEE------------------------EEEEEEBTTSCTT
T ss_pred -------------------cccceecCCcceeeccccccceee------------------------eeeeeeeecccee
Confidence 00111222222111111 111111 1111222223333
Q ss_pred EEeecCCcEEEEEccCCCCCceE--EeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEe
Q psy14906 475 ISGGNDQTVKVWHFKQTGKPPLR--SIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADF 552 (583)
Q Consensus 475 ~s~~~dg~i~iwd~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~ 552 (583)
.....++.+.+|+...+ .... ...+...+..+.++|++.+++.+ ++.|++||+.+++.+..+. +...+.+++|
T Consensus 213 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~ 287 (337)
T d1pbyb_ 213 DPTAYRTGLLTMDLETG--EMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNV 287 (337)
T ss_dssp SGGGEEEEEEEEETTTC--CEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEE
T ss_pred eecccCccEEEEEcCCC--cEEEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEEc-CCCCEEEEEE
Confidence 34455677999999887 4332 33445678889999999998876 4789999999999998876 6678999999
Q ss_pred cCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 553 SPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 553 s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
+|||++|++++.|++|++||+++++.++++
T Consensus 288 s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i 317 (337)
T d1pbyb_ 288 STDGSTVWLGGALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp CTTSCEEEEESBSSEEEEEETTTCCEEEEE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 999999999999999999999999998875
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.92 E-value=1e-21 Score=185.01 Aligned_cols=322 Identities=7% Similarity=-0.114 Sum_probs=219.6
Q ss_pred cccCccEEEE--ccCCCEEEEEe-----CCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEE
Q psy14906 108 KGHTSPVHLI--LPFGPHLISVD-----EESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG 180 (583)
Q Consensus 108 ~~h~~~v~~i--s~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 180 (583)
..+.+++..+ +|||+.++... .++.|.+||.++++.+.++. .+..+ .++|+|||++|+++
T Consensus 17 ~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~-----------~~~~~--~~a~SpDG~~l~va 83 (373)
T d2madh_ 17 GAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVN-----------GGFLP--NPVAAHSGSEFALA 83 (373)
T ss_pred ccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEe-----------CCCCc--cEEEcCCCCEEEEE
Confidence 3566677665 99999987642 34679999999999999886 33333 69999999999987
Q ss_pred e----------cCCeEEEEEccCCceeEEEeccCCCe-------EEEEEecCCCCEEEE-EcCCCcEEEEeCCCCeehhh
Q psy14906 181 L----------SNKKIILHNILTDESLMEFIQTWGPV-------TALSFRTDGPPMMVS-GSNTGHLTVWNLEDRQVENQ 242 (583)
Q Consensus 181 ~----------~d~~i~iw~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~~l~s-~~~dg~i~vwd~~~~~~~~~ 242 (583)
. .++.|.+||..+++.+..+..+.... ..+.|+++++.+++. ...++.+.+|+....+....
T Consensus 84 ~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~ 163 (373)
T d2madh_ 84 STSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQL 163 (373)
T ss_pred eecCCcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEE
Confidence 5 35789999999999998887664433 457899999844333 24467899999887765433
Q ss_pred hhhccccceEEEEEecCCCEE-EEEeCCCeEEEEEccCCCCCceeeEEecc------CCCCCeeEEEeeCCCCEEEEeeC
Q psy14906 243 IKKAHRKVVTGAHFLYNEPLL-VTSSPDNTLKLWIFDKADGNGRLLRIREG------HSAPPNYIQFYGNSSDNILSAAG 315 (583)
Q Consensus 243 ~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~i~~w~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~~ 315 (583)
.....++.++|+++.+ ++.+.|+.+.+|+... ......... +......+.+. .+..++..+.
T Consensus 164 -----~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 232 (373)
T d2madh_ 164 -----LSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAG----GAAGAGLVGAMLTAAQNLLTQPAQAN--KSGRIVWPVY 232 (373)
T ss_pred -----eccceeEEEecCCCcEEEEEcCCCeEEEEEcCC----ceeeEEEeeeccccCccceeeeEEEC--CCceEEEecC
Confidence 3446688999998754 6788899999997653 222222221 11112233333 3445666778
Q ss_pred CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcc
Q psy14906 316 DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKS 395 (583)
Q Consensus 316 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 395 (583)
++.+.+|+.......... .++...
T Consensus 233 ~~~v~~~~~~~~~~~~~~-------------------------------------------------------~~~~~~- 256 (373)
T d2madh_ 233 SGKILQADISAAGATNKA-------------------------------------------------------PIDALS- 256 (373)
T ss_pred CceEEEEEcCCCeEEEEE-------------------------------------------------------eecccc-
Confidence 889999998765432111 000000
Q ss_pred cccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEE
Q psy14906 396 KMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVI 475 (583)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~ 475 (583)
.......+.|.+...+..+.++.. ...+.+++..++
T Consensus 257 -----------------~~~~~~~~~~~~~~~~~~~~d~~~---------------------------~~~~~~~~~~~~ 292 (373)
T d2madh_ 257 -----------------GGRKADTWRPGGWQQVAYLKSSDG---------------------------IYLLTSEQSAWK 292 (373)
T ss_pred -----------------CcEEeeeeccCcceeeEEecCCCe---------------------------EEEecCCCceEE
Confidence 112222233333222222222211 111223455677
Q ss_pred EeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCc--EEEEEeCCceEEEEEccccceEEeecccccceeeEEec
Q psy14906 476 SGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS--MLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFS 553 (583)
Q Consensus 476 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s 553 (583)
+...++.+.+||..++ +.+..+.....+..++|+|||+ ++++++.|+.|++||+.+++.+.++..+....+.|++.
T Consensus 293 ~~~~~~~v~~~d~~t~--~~~~~~~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~~ 370 (373)
T d2madh_ 293 LHAAAKEVTSVTGLVG--QTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVM 370 (373)
T ss_pred eecCCCeEEEEECCCC--cEEEEecCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEEe
Confidence 7788889999999998 8888888888999999999998 44678899999999999999999999888888888876
Q ss_pred CC
Q psy14906 554 PD 555 (583)
Q Consensus 554 ~d 555 (583)
++
T Consensus 371 ~~ 372 (373)
T d2madh_ 371 NE 372 (373)
T ss_pred cC
Confidence 54
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.91 E-value=2.5e-21 Score=182.25 Aligned_cols=314 Identities=10% Similarity=-0.037 Sum_probs=216.8
Q ss_pred cCCcceEEEeeCCCCCEEEEEe-----cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEc----------
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVGL-----SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGS---------- 224 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~~-----~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~---------- 224 (583)
.+..++..++++|||+.+++.. ..+.+.+||..+++.+.++..+..+ .++|+|||+ .|++++
T Consensus 18 ~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~SpDG~-~l~va~~~~~~~~~~~ 94 (373)
T d2madh_ 18 AADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGS-EFALASTSFSRIAKGK 94 (373)
T ss_pred cCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEEcCCCC-EEEEEeecCCcccccc
Confidence 6788899999999999987652 3467999999999999998876433 799999999 565543
Q ss_pred CCCcEEEEeCCCCeehhhhhhccccc-------eEEEEEecCCCEEEEEe--CCCeEEEEEccCCCCCceeeEEeccCCC
Q psy14906 225 NTGHLTVWNLEDRQVENQIKKAHRKV-------VTGAHFLYNEPLLVTSS--PDNTLKLWIFDKADGNGRLLRIREGHSA 295 (583)
Q Consensus 225 ~dg~i~vwd~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~l~s~~--~d~~i~~w~~~~~~~~~~~~~~~~~~~~ 295 (583)
.++.|.+||..+++.+..+ ..+... ...+.|+++++.++... .++.+.+|+.. ..+... +..
T Consensus 95 ~~~~v~v~D~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~----~~~~~~----~~~ 165 (373)
T d2madh_ 95 RTDYVEVFDPVTFLPIADI-ELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQG----GSSDDQ----LLS 165 (373)
T ss_pred cceEEEEEECCCCcEEEEE-ecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeecc----CCeEEE----Eec
Confidence 4578999999999988776 344332 24578889988766554 45677888543 222222 233
Q ss_pred CCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccc
Q psy14906 296 PPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWN 375 (583)
Q Consensus 296 ~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (583)
...++.++|.....+++.+.|+.+.+|+...+...........
T Consensus 166 ~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~------------------------------------- 208 (373)
T d2madh_ 166 SPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAML------------------------------------- 208 (373)
T ss_pred cceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeeecc-------------------------------------
Confidence 4578889984445567888999999999887665443211000
Q ss_pred cEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCC
Q psy14906 376 NIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQ 455 (583)
Q Consensus 376 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 455 (583)
............+++++.++ ....++.+.+|+...+........
T Consensus 209 --------------------------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~--- 252 (373)
T d2madh_ 209 --------------------------------TAAQNLLTQPAQANKSGRIV-WPVYSGKILQADISAAGATNKAPI--- 252 (373)
T ss_pred --------------------------------ccCccceeeeEEECCCceEE-EecCCceEEEEEcCCCeEEEEEee---
Confidence 00000123344555555444 445678899998877654332211
Q ss_pred CCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccc
Q psy14906 456 PGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCT 535 (583)
Q Consensus 456 ~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 535 (583)
..+........+.|.....+..+.|+....+ +.+++..++....++.+.+||..+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-----------------------~~~~~~~~~~~~~~~~v~~~d~~t~~ 309 (373)
T d2madh_ 253 DALSGGRKADTWRPGGWQQVAYLKSSDGIYL-----------------------LTSEQSAWKLHAAAKEVTSVTGLVGQ 309 (373)
T ss_pred ccccCcEEeeeeccCcceeeEEecCCCeEEE-----------------------ecCCCceEEeecCCCeEEEEECCCCc
Confidence 3444555566666665555555555543222 23345667777888999999999999
Q ss_pred eEEeecccccceeeEEecCCCcE--EEEEeCCCeEEEEeCCCccccccc
Q psy14906 536 IIRKLSGHMGQLTDADFSPDSRW--LITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 536 ~~~~~~~h~~~v~~l~~s~d~~~--l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
.+..+. +...+..++|+|||+. +++++.|++|++||+.+|++++++
T Consensus 310 ~~~~~~-~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~ 357 (373)
T d2madh_ 310 TSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EEEEec-CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEE
Confidence 998876 6677999999999984 468899999999999999998876
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.88 E-value=1.8e-21 Score=181.90 Aligned_cols=310 Identities=12% Similarity=0.054 Sum_probs=206.1
Q ss_pred eEEEeeCCCCCEEEEEe-----cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEE---------EcCCCcEE
Q psy14906 165 VNVLEPSPVVDIIGVGL-----SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVS---------GSNTGHLT 230 (583)
Q Consensus 165 i~~~~~s~~~~~l~~~~-----~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s---------~~~dg~i~ 230 (583)
+.-.+.+||++.+++.. .+.+|.+||..+++.+.++..+.. ..++|+|||+.++++ +..++.|+
T Consensus 4 ~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~--~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~ 81 (355)
T d2bbkh_ 4 RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL--PNPVVADDGSFIAHASTVFSRIARGERTDYVE 81 (355)
T ss_dssp CBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS--CEEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred cEeEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCC--CceEEcCCCCEEEEEeCCCccccccCCCCEEE
Confidence 33446789999987753 345799999999999998876633 379999999954443 23478999
Q ss_pred EEeCCCCeehhhhhhccc-------cceEEEEEecCCCEEEEEe--CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEE
Q psy14906 231 VWNLEDRQVENQIKKAHR-------KVVTGAHFLYNEPLLVTSS--PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQ 301 (583)
Q Consensus 231 vwd~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~s~~--~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~ 301 (583)
+||+.+++.+..+ ..+. .....++|+|++++++.++ .+..+.+|+.. ..+.+..+..+.. ...
T Consensus 82 v~D~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---~~~ 153 (355)
T d2bbkh_ 82 VFDPVTLLPTADI-ELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLE----GKAFKRMLDVPDC---YHI 153 (355)
T ss_dssp EECTTTCCEEEEE-EETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETT----TTEEEEEEECCSE---EEE
T ss_pred EEECCCCCEEEEE-ecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecC----CCcEeeEEecCCc---ceE
Confidence 9999999877665 2222 2335689999999887765 45778889654 4555555543321 111
Q ss_pred EeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEe
Q psy14906 302 FYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIH 381 (583)
Q Consensus 302 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (583)
+ +......+..+.|+...++...........
T Consensus 154 ~-~~~~~~~~~~~~dg~~~~v~~~~~~~~~~~------------------------------------------------ 184 (355)
T d2bbkh_ 154 F-PTAPDTFFMHCRDGSLAKVAFGTEGTPEIT------------------------------------------------ 184 (355)
T ss_dssp E-EEETTEEEEEETTSCEEEEECCSSSCCEEE------------------------------------------------
T ss_pred e-ecCCcceEEEcCCCCEEEEEecCCCeEEEE------------------------------------------------
Confidence 1 113344555556666655554433221111
Q ss_pred cCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCC-------C
Q psy14906 382 TGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHD-------N 454 (583)
Q Consensus 382 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-------~ 454 (583)
+..... ..+...+....+.+++..++.++.++.+++|++..+.....-... .
T Consensus 185 ---------~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 243 (355)
T d2bbkh_ 185 ---------HTEVFH------------PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERA 243 (355)
T ss_dssp ---------ECCCCS------------CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHH
T ss_pred ---------eccccc------------ceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEe
Confidence 100000 000123445567778888888899999999998876543211000 0
Q ss_pred CCCcccCeeEEEEeCCCcEEEEeecC----------CcEEEEEccCCCCCceEEeeccCCeeeEEeccCCc--EEEEEeC
Q psy14906 455 QPGHVGGVRGVVSDNLNQIVISGGND----------QTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS--MLAVCLD 522 (583)
Q Consensus 455 ~~~h~~~v~~~~~s~~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~~~ 522 (583)
..........+++++++..++....+ ..|.+||..++ +.+..+.....+.+++|+|||+ +++++..
T Consensus 244 ~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~--~~~~~~~~~~~~~~~a~spDG~~~l~v~~~~ 321 (355)
T d2bbkh_ 244 DGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG--ERLAKFEMGHEIDSINVSQDEKPLLYALSTG 321 (355)
T ss_dssp TTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC--CEEEEEEEEEEECEEEECCSSSCEEEEEETT
T ss_pred eeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCC--cEEEEecCCCCEEEEEEcCCCCeEEEEEECC
Confidence 00112234568899999887765443 36999999998 8888888888899999999998 4556777
Q ss_pred CceEEEEEccccceEEeecccccceeeEEecCCC
Q psy14906 523 DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDS 556 (583)
Q Consensus 523 dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~ 556 (583)
|+.|++||+++++.+.++.++......+.+.++|
T Consensus 322 d~~i~v~D~~tg~~~~~i~~~G~~p~~i~~~d~~ 355 (355)
T d2bbkh_ 322 DKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355 (355)
T ss_dssp TTEEEEEETTTCCEEEEECCCCSSCCEEECCCCC
T ss_pred CCEEEEEECCCCCEEEEEeCcCCCccEEEeCCCC
Confidence 9999999999999999998776666666665543
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.87 E-value=1.1e-20 Score=176.53 Aligned_cols=320 Identities=10% Similarity=0.039 Sum_probs=208.6
Q ss_pred eEEEEeeCeEEEEE------cCCeEEEEec-cceeeeeecccCccEEEEccCCCEEEEEe----------CCCcEEEEEc
Q psy14906 76 ITCLSSDFFHIYTS------ANNIIYAWRR-GIDIVGTYKGHTSPVHLILPFGPHLISVD----------EESNVKVWDI 138 (583)
Q Consensus 76 v~~~~~~~~~~~~~------~~~~i~vw~~-~~~~~~~~~~h~~~v~~is~~~~~l~s~~----------~dg~i~iwd~ 138 (583)
+.+.++|++.++.. .++.|.+||. .++.+.++..+..+-.++||||++|++++ .|+.|++||.
T Consensus 6 ~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~ 85 (355)
T d2bbkh_ 6 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 85 (355)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred eEeeCCCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEEC
Confidence 34556688655543 3457999996 56778888877777667899999888653 4789999999
Q ss_pred CCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe--cCCeEEEEEccCCceeEEEeccC-------CCeEE
Q psy14906 139 KAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL--SNKKIILHNILTDESLMEFIQTW-------GPVTA 209 (583)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~d~~i~iw~~~~~~~~~~~~~~~-------~~v~~ 209 (583)
.+++.+..+........ ........++|+|++++++++. .+..+.+|+..+++.+..+..+. .....
T Consensus 86 ~t~~~~~~~~~~~~~~~----~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (355)
T d2bbkh_ 86 VTLLPTADIELPDAPRF----LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTF 161 (355)
T ss_dssp TTCCEEEEEEETTCCCC----CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEE
T ss_pred CCCCEEEEEecCCccee----ecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcce
Confidence 99999888764322111 1122345689999999988775 45689999999999888776542 23345
Q ss_pred EEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEE
Q psy14906 210 LSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289 (583)
Q Consensus 210 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~ 289 (583)
+.+++|++.+++....++.+.+++...... .+...+....+.+++..++.++.++.+.+|++... ....+..
T Consensus 162 ~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~ 233 (355)
T d2bbkh_ 162 FMHCRDGSLAKVAFGTEGTPEITHTEVFHP------EDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSG--DAKFLPA 233 (355)
T ss_dssp EEEETTSCEEEEECCSSSCCEEEECCCCSC------TTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTS--SCEECCC
T ss_pred EEEcCCCCEEEEEecCCCeEEEEecccccc------eecceeeeccccCCCCeEEEecCCCeEEEEecCCC--cEEEEec
Confidence 667777774444455556666666554432 23334555678888889999999999999976532 2233333
Q ss_pred eccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecc
Q psy14906 290 REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLA 369 (583)
Q Consensus 290 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (583)
...+........+.| ++...+..+.|+...++....+...
T Consensus 234 ~~~~~~~~~~~~~~p-~~~~~~~~~~d~~~~~~~~~~~~~~--------------------------------------- 273 (355)
T d2bbkh_ 234 VEALTEAERADGWRP-GGWQQVAYHRALDRIYLLVDQRDEW--------------------------------------- 273 (355)
T ss_dssp EESSCHHHHHTTEEE-CSSSCEEEETTTTEEEEEEEECCTT---------------------------------------
T ss_pred cCCcccceEeeeeec-cceEEEEEeCCCCeEEEEeccCCce---------------------------------------
Confidence 333333333333444 3444444444544444332211100
Q ss_pred cccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccc
Q psy14906 370 REKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGS 449 (583)
Q Consensus 370 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 449 (583)
+.......|.+||..+++.+..
T Consensus 274 ----------------------------------------------------------~~~~~~~~v~v~d~~t~~~~~~ 295 (355)
T d2bbkh_ 274 ----------------------------------------------------------RHKTASRFVVVLDAKTGERLAK 295 (355)
T ss_dssp ----------------------------------------------------------CTTSCEEEEEEEETTTCCEEEE
T ss_pred ----------------------------------------------------------eecCCCCeEEEEeCCCCcEEEE
Confidence 0001234688999999888877
Q ss_pred cCCCCCCCcccCeeEEEEeCCCc--EEEEeecCCcEEEEEccCCCCCceEEeecc-CCeeeEEeccC
Q psy14906 450 YGHDNQPGHVGGVRGVVSDNLNQ--IVISGGNDQTVKVWHFKQTGKPPLRSIKLD-NGISFFRTHQE 513 (583)
Q Consensus 450 ~~~~~~~~h~~~v~~~~~s~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~s~~ 513 (583)
+ .+...+.+++|+|||+ ++++++.|+.|++||++++ +.++.+... .....+.+.++
T Consensus 296 ~------~~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg--~~~~~i~~~G~~p~~i~~~d~ 354 (355)
T d2bbkh_ 296 F------EMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG--EELRSVNQLGHGPQVITTADM 354 (355)
T ss_dssp E------EEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTC--CEEEEECCCCSSCCEEECCCC
T ss_pred e------cCCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCC--CEEEEEeCcCCCccEEEeCCC
Confidence 6 3556689999999997 4567778999999999999 888888644 44455554443
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=5.5e-20 Score=169.97 Aligned_cols=309 Identities=16% Similarity=0.164 Sum_probs=191.5
Q ss_pred EEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe-cCCeEEEEEccCCceeEEEe-
Q psy14906 124 LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL-SNKKIILHNILTDESLMEFI- 201 (583)
Q Consensus 124 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~- 201 (583)
+++++.|++|++|++.+...+..+... .+.+.+..|+|+|||++|+++. .++.|.+|++.......++.
T Consensus 7 ~v~~~~~~~I~v~~~~~~~~l~~~~~~---------~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~ 77 (333)
T d1ri6a_ 7 YIASPESQQIHVWNLNHEGALTLTQVV---------DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAA 77 (333)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEE---------ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred EEECCCCCcEEEEEEcCCCCeEEEEEE---------cCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEee
Confidence 456678999999999765433322211 6778899999999999986554 58999999998665443332
Q ss_pred --ccCCCeEEEEEecCCCCEEEEEc-CCCcEEEEeCCCCeehhhhh-hccccceEEEEEecCCCEEEEEeC-CCeEEEEE
Q psy14906 202 --QTWGPVTALSFRTDGPPMMVSGS-NTGHLTVWNLEDRQVENQIK-KAHRKVVTGAHFLYNEPLLVTSSP-DNTLKLWI 276 (583)
Q Consensus 202 --~~~~~v~~~~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~-d~~i~~w~ 276 (583)
.+...+..++|+|||+ +|++++ .++.+.+|+........... ..+...+.++.++|++++++.++. +..+.+|+
T Consensus 78 ~~~~~~~p~~l~~spDg~-~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~ 156 (333)
T d1ri6a_ 78 ESALPGSLTHISTDHQGQ-FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFT 156 (333)
T ss_dssp EEECSSCCSEEEECTTSS-EEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEE
T ss_pred ecccCCCceEEEEcCCCC-EEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeeccccccceeeEEE
Confidence 3335678899999999 555554 57789999887665433321 345667888999999998887764 46788897
Q ss_pred ccCCCCCceee--EEeccCCCCCeeEEEeeCCCCEEEEe-eCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccc
Q psy14906 277 FDKADGNGRLL--RIREGHSAPPNYIQFYGNSSDNILSA-AGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMN 353 (583)
Q Consensus 277 ~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (583)
........... .........+..++|++ ++..++.. ...+...+|+............
T Consensus 157 ~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------------------ 217 (333)
T d1ri6a_ 157 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHP-NEQYAYCVNELNSSVDVWELKDPHGNIECVQ------------------ 217 (333)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEESSCTTSCCEEEE------------------
T ss_pred eccCCcceeeeceeeeeecCCCccEEEEec-cceeEEeeccccCceEEEeecccccceeeee------------------
Confidence 65332111111 11222344567899987 56665544 4566777777644321110000
Q ss_pred cccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEE-ec
Q psy14906 354 EKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIG-YS 432 (583)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~ 432 (583)
.+.... . ..........++++++++++++. ..
T Consensus 218 ----------------------------------~~~~~~-----------~--~~~~~~~~~~~~~s~d~~~~~~~~~~ 250 (333)
T d1ri6a_ 218 ----------------------------------TLDMMP-----------E--NFSDTRWAADIHITPDGRHLYACDRT 250 (333)
T ss_dssp ----------------------------------EEECSC-----------T--TCCSCCCEEEEEECTTSSEEEEEETT
T ss_pred ----------------------------------eeeeee-----------c--CCCccccceeEEEecccCceeeeccc
Confidence 000000 0 00011346678899999876655 55
Q ss_pred CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee-cCCcEEEEEccCCCCCc--eEEeeccCCeeeEE
Q psy14906 433 SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQTGKPP--LRSIKLDNGISFFR 509 (583)
Q Consensus 433 dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~--~~~~~~~~~v~~~~ 509 (583)
++.+.+|++............ ..+...+..++|+|||++|++++ .++.|++|+++.....+ +..+.......++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l~~~~~~~~g~~p~~v~ 328 (333)
T d1ri6a_ 251 ASLITVFSVSEDGSVLSKEGF--QPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVV 328 (333)
T ss_dssp TTEEEEEEECTTSCCEEEEEE--EECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECSSSCCEEE
T ss_pred CCeEEEEEEcCCCCEEEEEEE--eCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCcEEEEEeccCCCCCcEEE
Confidence 788999998765443332100 12345678899999999877665 56899999765431122 33344444444444
Q ss_pred e
Q psy14906 510 T 510 (583)
Q Consensus 510 ~ 510 (583)
+
T Consensus 329 ~ 329 (333)
T d1ri6a_ 329 V 329 (333)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=8e-19 Score=162.02 Aligned_cols=289 Identities=7% Similarity=0.017 Sum_probs=189.9
Q ss_pred EEEEEecCCeEEEEEccCCceeEEE--eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhh--hhccccce
Q psy14906 176 IIGVGLSNKKIILHNILTDESLMEF--IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQI--KKAHRKVV 251 (583)
Q Consensus 176 ~l~~~~~d~~i~iw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~~~v 251 (583)
.+++++.+++|++|++.+...+..+ ..+.+.+..++|+|||+++++++..|+.|++|++........+ ...+...+
T Consensus 6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p 85 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSL 85 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCc
Confidence 3467779999999999765443333 3566899999999999955566677899999999865433222 12344567
Q ss_pred EEEEEecCCCEEEEEeC-CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeC-CCcEEEEEcccccc
Q psy14906 252 TGAHFLYNEPLLVTSSP-DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFNTKSETS 329 (583)
Q Consensus 252 ~~~~~~~~~~~l~s~~~-d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~ 329 (583)
..++|+|||++|++++. ++.+.+|+.+.. ..........+...+.++.++| ++++++.++. +..+.+|+......
T Consensus 86 ~~l~~spDg~~l~v~~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~~~v~~s~-d~~~~~~~~~~~~~i~~~~~~~~~~ 162 (333)
T d1ri6a_ 86 THISTDHQGQFVFVGSYNAGNVSVTRLEDG--LPVGVVDVVEGLDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGH 162 (333)
T ss_dssp SEEEECTTSSEEEEEETTTTEEEEEEEETT--EEEEEEEEECCCTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred eEEEEcCCCCEEeecccCCCceeeeccccc--cceecccccCCCccceEEEeee-cceeeeccccccceeeEEEeccCCc
Confidence 78999999999998875 678999976532 2333344455677788999997 7877777664 55688898765433
Q ss_pred ceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccc
Q psy14906 330 NKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQ 409 (583)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 409 (583)
....... ....
T Consensus 163 ~~~~~~~---------------------------------------------------------------------~~~~ 173 (333)
T d1ri6a_ 163 LVAQDPA---------------------------------------------------------------------EVTT 173 (333)
T ss_dssp EEEEEEE---------------------------------------------------------------------EEEC
T ss_pred ceeeece---------------------------------------------------------------------eeee
Confidence 2211000 0000
Q ss_pred cCCCCceEEEEccCCcEEEEEe-cCceEEEEEcccCcccc----cc-CCCCCCCcccCeeEEEEeCCCcEEEE-eecCCc
Q psy14906 410 AKQSKPTCVYITHCGNFVLIGY-SSGHVDRFNIQSGAHRG----SY-GHDNQPGHVGGVRGVVSDNLNQIVIS-GGNDQT 482 (583)
Q Consensus 410 ~~~~~i~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~----~~-~~~~~~~h~~~v~~~~~s~~~~~l~s-~~~dg~ 482 (583)
........++|++++.+++... ..+...+++........ .. ..............+++++++++++. +..++.
T Consensus 174 ~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~ 253 (333)
T d1ri6a_ 174 VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASL 253 (333)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTE
T ss_pred ecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCe
Confidence 0114467899999998876654 55677787765332211 11 00100234456778899999986655 456788
Q ss_pred EEEEEccCCCCCce--EEeeccCCeeeEEeccCCcEEEEEeC-CceEEEEEc--cccce
Q psy14906 483 VKVWHFKQTGKPPL--RSIKLDNGISFFRTHQESSMLAVCLD-DFTVNIIDI--DTCTI 536 (583)
Q Consensus 483 i~iwd~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~--~~~~~ 536 (583)
+.+|++........ ........+..++|+|||++|++++. ++.|.+|++ ++|++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~~tG~l 312 (333)
T d1ri6a_ 254 ITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 312 (333)
T ss_dssp EEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred EEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEEEEECCCCcE
Confidence 99999876631211 12223356789999999998887754 589999955 56654
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.83 E-value=1.6e-18 Score=167.95 Aligned_cols=378 Identities=11% Similarity=0.004 Sum_probs=213.9
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec---------CCeEEE
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS---------NKKIIL 188 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---------d~~i~i 188 (583)
.++++++.. .|+.+.+||+.+++....+... .+ ..+...|.++.|||||++|+.++. ++.+.+
T Consensus 25 ~~d~~~~~~--~~~~~~~~~~~t~~~~~~~~~~--~~----~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l 96 (470)
T d2bgra1 25 ISDHEYLYK--QENNILVFNAEYGNSSVFLENS--TF----DEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (470)
T ss_dssp CSSSEEEEE--SSSCEEEEETTTCCEEEEECTT--TT----TTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred CCCCEEEEE--cCCcEEEEECCCCCEEEEEchh--hh----hhccCccceeEECCCCCEEEEEECCcceeeeccCceEEE
Confidence 577777754 5788999999999876555311 11 155678999999999999998753 567899
Q ss_pred EEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhc-----------------cccce
Q psy14906 189 HNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKA-----------------HRKVV 251 (583)
Q Consensus 189 w~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-----------------~~~~v 251 (583)
||+.+++. ..+..+...+..+.|||||+ .+|.. .++.+.+|+..+++..+....+ ..+..
T Consensus 97 ~d~~~~~~-~~l~~~~~~~~~~~~SPDG~-~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~ 173 (470)
T d2bgra1 97 YDLNKRQL-ITEERIPNNTQWVTWSPVGH-KLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (470)
T ss_dssp EETTTTEE-CCSSCCCTTEEEEEECSSTT-CEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EECCCCcc-cccccCCccccccccccCcc-eeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCc
Confidence 99998764 45777888999999999999 55554 4678999999887655433111 12334
Q ss_pred EEEEEecCCCEEEEEeCCCe-EEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccc
Q psy14906 252 TGAHFLYNEPLLVTSSPDNT-LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSN 330 (583)
Q Consensus 252 ~~~~~~~~~~~l~s~~~d~~-i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 330 (583)
..+.|+|||++|+....|.. +..|.+....... ........+.+. ..+. ...+..+.+|++..+...
T Consensus 174 ~~~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~~~-------~~~~~~~~~~~~-~~g~----~~~~~~~~v~~~~~~~~~ 241 (470)
T d2bgra1 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES-------LQYPKTVRVPYP-KAGA----VNPTVKFFVVNTDSLSSV 241 (470)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT-------CSSCEEEEEECC-BTTS----CCCEEEEEEEEGGGCCSS
T ss_pred cccEECCCCCccceeEecCCcCceEEEEeeccCC-------CCCCeeeeeccc-cccc----cCCcceEEEEECCCccee
Confidence 56889999999999876533 5555332110000 000011111111 1111 123346788888776543
Q ss_pred eeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeeccccccc
Q psy14906 331 KNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQA 410 (583)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 410 (583)
.......... ......
T Consensus 242 ~~~~~~~~~~----------------------------------------------------------------~~~~~~ 257 (470)
T d2bgra1 242 TNATSIQITA----------------------------------------------------------------PASMLI 257 (470)
T ss_dssp SCCCEEEECC----------------------------------------------------------------CHHHHT
T ss_pred eeccccccCC----------------------------------------------------------------ccccCC
Confidence 3221100000 000000
Q ss_pred CCCCceEEEEccCCcEEEEEec---C-ceEEE--EEcccCccccccC--------CCCCCCcccCeeEEEEeCCCcEEEE
Q psy14906 411 KQSKPTCVYITHCGNFVLIGYS---S-GHVDR--FNIQSGAHRGSYG--------HDNQPGHVGGVRGVVSDNLNQIVIS 476 (583)
Q Consensus 411 ~~~~i~~~~~s~~~~~l~~~~~---d-g~i~i--~d~~~~~~~~~~~--------~~~~~~h~~~v~~~~~s~~~~~l~s 476 (583)
....+..+.|.++++.++.... + ..+.+ +|..++....... ..-...|........+.+++.+++.
T Consensus 258 ~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~tg~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 337 (470)
T d2bgra1 258 GDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKII 337 (470)
T ss_dssp SCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEE
T ss_pred CCceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCCCCcEEEEEEEeeeeeeccceeecccCCCceeeecCCCcEEEE
Confidence 0123455666666665544321 1 12333 3333443322110 0000122222223333333445666
Q ss_pred eecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEE-EEEeCCc------eEEEEEccccceEEe----eccccc
Q psy14906 477 GGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSML-AVCLDDF------TVNIIDIDTCTIIRK----LSGHMG 545 (583)
Q Consensus 477 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg------~i~i~d~~~~~~~~~----~~~h~~ 545 (583)
...||...||..............+...+..+ ++++++.+ +++..++ .|+-.++..+..... +.+|..
T Consensus 338 s~~dg~~~ly~~~~~g~~~~~lt~g~~~v~~~-~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~~~lt~~~~~~~~ 416 (470)
T d2bgra1 338 SNEEGYRHICYFQIDKKDCTFITKGTWEVIGI-EALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCELNPERC 416 (470)
T ss_dssp ECTTSCEEEEEEETTCSCCEESCCSSSCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEETTCTTCEEESSTTTSTTTB
T ss_pred eccCcCceeEEEeccCCceeeeccCCeeEEEE-EEECCCEEEEEEecCCCCcceEEEEEEECCCCCceeEecccccCCCC
Confidence 77788766665543332554444555567766 44455543 4443322 244445554444333 346888
Q ss_pred ceeeEEecCCCcEEEE---EeCCCeEEEEeCCCcccccccC
Q psy14906 546 QLTDADFSPDSRWLIT---ASMDCTIRVWDIPSSQLIDCFQ 583 (583)
Q Consensus 546 ~v~~l~~s~d~~~l~s---~~~d~~i~vw~~~~~~~~~~~~ 583 (583)
.+..++|||||++++. +...-.+.+|+..+|+.++.|+
T Consensus 417 ~~~s~~fSpdgky~~~~~s~~~~P~~~l~~~~~g~~v~~le 457 (470)
T d2bgra1 417 QYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLE 457 (470)
T ss_dssp CBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEEE
T ss_pred CEEEEEECCCCCEEEEEecCCCCCeEEEEECCCCCEEEEEe
Confidence 8999999999999772 3333468999999999888763
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.77 E-value=1.2e-19 Score=166.78 Aligned_cols=343 Identities=13% Similarity=0.079 Sum_probs=215.0
Q ss_pred EEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEecc
Q psy14906 124 LISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQT 203 (583)
Q Consensus 124 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~ 203 (583)
++|++.+|.|++|++.+++.+.++. .|+|++... .|..+.+.+++. ++........|
T Consensus 14 f~Sgg~sG~V~V~dlpS~r~l~~Ip--------------------Vfspd~~~g-~g~~~es~~vl~--~~~~~~~gd~h 70 (441)
T d1qnia2 14 FWSGGHQGEVRVLGVPSMRELMRIP--------------------VFNVDSATG-WGITNESKEILG--GDQQYLNGDCH 70 (441)
T ss_dssp EEECBTTCCEEEEEETTTEEEEEEC--------------------SSSBCTTTC-TTTSHHHHHHHC--SSSCCSCCCBC
T ss_pred EEeCCCCCcEEEEeCCCCcEEEEEE--------------------eEcCCCCEE-EEECCccceEEe--cccccccCccc
Confidence 4567889999999999999998885 267766532 222221222211 11111112234
Q ss_pred CCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCC--EEEEEeCCCe----------
Q psy14906 204 WGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEP--LLVTSSPDNT---------- 271 (583)
Q Consensus 204 ~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~d~~---------- 271 (583)
........++|||++++++...+..|.++|+.+++....+...+...+..++|+|+++ +++..+.+..
T Consensus 71 hP~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~ 150 (441)
T d1qnia2 71 HPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFS 150 (441)
T ss_dssp CCEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCC
T ss_pred CCCcceecccCCCCEEEEEcCCCCEEEEEECCCCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccc
Confidence 3455566678999966677778899999999999887766345677899999999998 4544443321
Q ss_pred -------EEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC-cEEEEEccccccceeeccchhhhhhh
Q psy14906 272 -------LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS-TLRIFNTKSETSNKNLGIASANRNNL 343 (583)
Q Consensus 272 -------i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~ 343 (583)
+..+ +.. .......... ...+..+.++| +|+++++.+.+. .+..++..+......
T Consensus 151 ~~~~~~~~~~i--D~~--t~~v~~qI~v-~~~p~~v~~sp-dGk~a~vt~~nse~~~~id~~t~~~~d~----------- 213 (441)
T d1qnia2 151 LDNSYTMFTAI--DAE--TMDVAWQVIV-DGNLDNTDADY-TGKYATSTCYNSERAVDLAGTMRNDRDW----------- 213 (441)
T ss_dssp GGGEEEEEEEE--ETT--TCSEEEEEEE-SSCCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCSSBCE-----------
T ss_pred cccccceEEee--cCc--cceeeEEEec-CCCccceEECC-CCCEEEEEecCCCceEEEeccCcceEEE-----------
Confidence 1223 322 2233333332 23568899997 888888877653 232233322221111
Q ss_pred hhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccC
Q psy14906 344 KRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHC 423 (583)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 423 (583)
+.+.+ ....+.++|+
T Consensus 214 -------------------------------------------i~v~n----------------------~p~~~~~~~d 228 (441)
T d1qnia2 214 -------------------------------------------VVVFN----------------------VERIAAAVKA 228 (441)
T ss_dssp -------------------------------------------EEEEE----------------------HHHHHHHHHT
T ss_pred -------------------------------------------EEeCC----------------------ccceEEEecC
Confidence 11111 1122345678
Q ss_pred CcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEE-EEeecCCcEEEEEccCCCC------Cce
Q psy14906 424 GNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIV-ISGGNDQTVKVWHFKQTGK------PPL 496 (583)
Q Consensus 424 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l-~s~~~dg~i~iwd~~~~~~------~~~ 496 (583)
|+++.++. ++.+.+++......+..+ ... .....+.++|||+++ +++..+++|.+||+++... ...
T Consensus 229 Gk~~~v~~-~~v~vvd~~~~~~v~~~I-----Pvg-ksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~ 301 (441)
T d1qnia2 229 GNFKTIGD-SKVPVVDGRGESEFTRYI-----PVP-KNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELR 301 (441)
T ss_dssp TCCBCCTT-CCCCEEECSSSCSSEEEE-----CCB-SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGG
T ss_pred CCEEEeCC-CCcEEEEcccCCceEEEE-----eCC-CCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcc
Confidence 88776643 566777776666666666 232 335789999999976 4567899999999875310 111
Q ss_pred EEe----eccCCeeeEEeccCCcEEEEEeCCceEEEEEcccc----------ceEEee-----cccccceeeEEecCCCc
Q psy14906 497 RSI----KLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTC----------TIIRKL-----SGHMGQLTDADFSPDSR 557 (583)
Q Consensus 497 ~~~----~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~----------~~~~~~-----~~h~~~v~~l~~s~d~~ 557 (583)
..+ +..-.....+|.++|..+.+.+-|.+|..|++... ..+..+ .||...+.+.+++|||+
T Consensus 302 ~~~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk 381 (441)
T d1qnia2 302 DTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGK 381 (441)
T ss_dssp GGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCC
T ss_pred eEEEeecccccCcccceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCc
Confidence 111 11123455689999999999999999999998521 233333 58888899999999999
Q ss_pred EEEEE---eCCC----------eEEEEeCCCcccc
Q psy14906 558 WLITA---SMDC----------TIRVWDIPSSQLI 579 (583)
Q Consensus 558 ~l~s~---~~d~----------~i~vw~~~~~~~~ 579 (583)
||+++ +.|. .-.+.|+. |+.+
T Consensus 382 ~l~s~~k~s~dr~~~~g~~~~~~~q~~~i~-~~~~ 415 (441)
T d1qnia2 382 WLVVLSKFSKDRFLPVGPLHPENDQLIDIS-GEEM 415 (441)
T ss_dssp EEEEEESCCGGGSCCCSSSCCEEEEEEECS-SSSC
T ss_pred EEEecCccccccCcCCCCCCCccceeEEec-CCeE
Confidence 99999 5554 34677775 4433
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.77 E-value=6.4e-17 Score=151.07 Aligned_cols=303 Identities=7% Similarity=-0.049 Sum_probs=193.4
Q ss_pred ccCCCEE--EE-EeCCC--cEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEe----------c
Q psy14906 118 LPFGPHL--IS-VDEES--NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGL----------S 182 (583)
Q Consensus 118 s~~~~~l--~s-~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----------~ 182 (583)
.++++.. +. ...++ .|.+||..+++.+.++. .+... .++|+|||+.|++.+ .
T Consensus 28 ~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~-----------~~~~~--~~a~spDg~~i~~~~~~~~~~~~g~~ 94 (368)
T d1mdah_ 28 GAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSL-----------GAFLS--LAVAGHSGSDFALASTSFARSAKGKR 94 (368)
T ss_dssp CCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEE-----------ECTTC--EEEECTTSSCEEEEEEEETTTTSSSE
T ss_pred CCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEe-----------CCCCC--cceECCCCCEEEEEcccCcccccccc
Confidence 6777753 22 23344 47777999999988887 44333 589999999998764 3
Q ss_pred CCeEEEEEccCCceeEEEeccCC-------CeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEE
Q psy14906 183 NKKIILHNILTDESLMEFIQTWG-------PVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAH 255 (583)
Q Consensus 183 d~~i~iw~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~ 255 (583)
++.|.+||..+++.+..+..+.. ....++|+|||++++++...++.+.+||+.+++....+ ..+.....
T Consensus 95 d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~--- 170 (368)
T d1mdah_ 95 TDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLT-KSASCFHI--- 170 (368)
T ss_dssp EEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEE-ECSSCCCC---
T ss_pred CCeEEEEECCCCcEeeeecCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEe-eccCcceE---
Confidence 67899999999999988764422 23468999999965555567899999999999888776 33332211
Q ss_pred EecCCCEEEEEeCCCeEEEEEccCCCCCceee--EEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceee
Q psy14906 256 FLYNEPLLVTSSPDNTLKLWIFDKADGNGRLL--RIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 256 ~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 333 (583)
+......++..+.||.+.++++.......... .....+...+....+.+ ++..+.+. .+.+.+++...+......
T Consensus 171 ~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~--~~~v~~~~~~~~~~~~~~ 247 (368)
T d1mdah_ 171 HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANY-PGMLVWAV--ASSILQGDIPAAGATMKA 247 (368)
T ss_dssp EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETT-TTEEEECB--SSCCEEEECCSSCCEEEC
T ss_pred ccCCCceEEEEcCCCCEEEEEecCCceeeeeeecccccccccceeeccccc-CcEEEEec--CCCEEEEeecCCceEEEe
Confidence 11223456666778887777654332111100 11223344455666654 45444433 456677776554332111
Q ss_pred ccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCC
Q psy14906 334 GIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQS 413 (583)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (583)
.... ....... ... ...
T Consensus 248 ~~~~-------------------------------------------------------~~~~~~~-----~~~---~~~ 264 (368)
T d1mdah_ 248 AIDG-------------------------------------------------------NESGRKA-----DNF---RSA 264 (368)
T ss_dssp CCCS-------------------------------------------------------SCTHHHH-----TTE---EEC
T ss_pred eccc-------------------------------------------------------ccceeee-----eee---cCC
Confidence 0000 0000000 000 002
Q ss_pred CceEEEEccCCcEEEEEecC---------ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCc--EEEEeecCCc
Q psy14906 414 KPTCVYITHCGNFVLIGYSS---------GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQ--IVISGGNDQT 482 (583)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~--~l~s~~~dg~ 482 (583)
....+++++++..+++...+ ..|.+||..+++.+..+ .+...+.+++|+|||+ +++++..|+.
T Consensus 265 g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~------~~~~~~~~~a~spDG~~~ly~s~~~~~~ 338 (368)
T d1mdah_ 265 GFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPI------SNGHDSDAIIAAQDGASDNYANSAGTEV 338 (368)
T ss_dssp SSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECC------EEEEEECEEEECCSSSCEEEEEETTTTE
T ss_pred CceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEe------cCCCceeEEEECCCCCEEEEEEeCCCCe
Confidence 23457788888877665432 46999999999988776 4556799999999997 3466778899
Q ss_pred EEEEEccCCCCCceEEeeccCCeeeEEec
Q psy14906 483 VKVWHFKQTGKPPLRSIKLDNGISFFRTH 511 (583)
Q Consensus 483 i~iwd~~~~~~~~~~~~~~~~~v~~~~~s 511 (583)
|++||..++ +.+..++.......|++-
T Consensus 339 v~v~D~~tg--k~~~~i~~g~~P~~l~~~ 365 (368)
T d1mdah_ 339 LDIYDAASD--QDQSSVELDKGPESLSVQ 365 (368)
T ss_dssp EEEEESSSC--EEEEECCCCSCCCEEECC
T ss_pred EEEEECCCC--CEEEEEECCCCCCEEEEe
Confidence 999999999 888888877767766653
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.74 E-value=4.6e-16 Score=145.21 Aligned_cols=307 Identities=8% Similarity=-0.046 Sum_probs=196.1
Q ss_pred cCCcceEEEeeCCCCCEEEEE---ecC--CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEE----------c
Q psy14906 160 RWNSCVNVLEPSPVVDIIGVG---LSN--KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG----------S 224 (583)
Q Consensus 160 ~~~~~i~~~~~s~~~~~l~~~---~~d--~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~----------~ 224 (583)
.+.++...++..++++..... ..+ ..+.+||..+++.+..+..+... .++|+|||+ .+++. .
T Consensus 17 ~~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~~~~~~~~~~~--~~a~spDg~-~i~~~~~~~~~~~~g~ 93 (368)
T d1mdah_ 17 ASDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGS-DFALASTSFARSAKGK 93 (368)
T ss_dssp CCCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSS-CEEEEEEEETTTTSSS
T ss_pred ccCCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCCcEEEEEeCCCCC--cceECCCCC-EEEEEcccCccccccc
Confidence 445566667778888864332 233 35777899999999988877544 689999999 45543 3
Q ss_pred CCCcEEEEeCCCCeehhhhhhccc-------cceEEEEEecCCCEEEEEe-CCCeEEEEEccCCCCCceeeEEeccCCCC
Q psy14906 225 NTGHLTVWNLEDRQVENQIKKAHR-------KVVTGAHFLYNEPLLVTSS-PDNTLKLWIFDKADGNGRLLRIREGHSAP 296 (583)
Q Consensus 225 ~dg~i~vwd~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~ 296 (583)
.|+.|++||..+++++..+ ..+. .....++|+|||++|+++. .++.+.+||+. ..+....+..+...
T Consensus 94 ~d~~v~v~D~~t~~~~~~i-~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~----~~~~~~~~~~~~~~ 168 (368)
T d1mdah_ 94 RTDYVEVFDPVTFLPIADI-ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVP----GASDDQLTKSASCF 168 (368)
T ss_dssp EEEEEEEECTTTCCEEEEE-EETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEET----TTEEEEEEECSSCC
T ss_pred cCCeEEEEECCCCcEeeee-cCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECC----CCcEeEEeeccCcc
Confidence 4678999999999887766 2222 2234689999999988776 57999999775 45666666554433
Q ss_pred CeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccccccccc
Q psy14906 297 PNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNN 376 (583)
Q Consensus 297 v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (583)
. +.|.....++..+.||.+.++++.............
T Consensus 169 ~----~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~--------------------------------------- 205 (368)
T d1mdah_ 169 H----IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQ--------------------------------------- 205 (368)
T ss_dssp C----CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCC---------------------------------------
T ss_pred e----EccCCCceEEEEcCCCCEEEEEecCCceeeeeeecc---------------------------------------
Confidence 2 222345677788889999999876654322110000
Q ss_pred EEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCC-
Q psy14906 377 IAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQ- 455 (583)
Q Consensus 377 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~- 455 (583)
....+...+....+.+++..+.. ..+.+++++...+...........
T Consensus 206 ------------------------------~~~~~~~~~~~~~~~~~g~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~ 253 (368)
T d1mdah_ 206 ------------------------------CTGAQNCSSQAAQANYPGMLVWA--VASSILQGDIPAAGATMKAAIDGNE 253 (368)
T ss_dssp ------------------------------SCTTSCBCSCCEEETTTTEEEEC--BSSCCEEEECCSSCCEEECCCCSSC
T ss_pred ------------------------------cccccccceeecccccCcEEEEe--cCCCEEEEeecCCceEEEeeccccc
Confidence 00000022334455555544443 234455555544433221110000
Q ss_pred ------CCcccCeeEEEEeCCCcEEEEeecC---------CcEEEEEccCCCCCceEEeeccCCeeeEEeccCCc--EEE
Q psy14906 456 ------PGHVGGVRGVVSDNLNQIVISGGND---------QTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESS--MLA 518 (583)
Q Consensus 456 ------~~h~~~v~~~~~s~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~ 518 (583)
.........+++++++..++....+ ..|.+||..++ +.+..+.....+..++|+|||+ +++
T Consensus 254 ~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~--~~~~~~~~~~~~~~~a~spDG~~~ly~ 331 (368)
T d1mdah_ 254 SGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG--QTSGPISNGHDSDAIIAAQDGASDNYA 331 (368)
T ss_dssp THHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC--CEEECCEEEEEECEEEECCSSSCEEEE
T ss_pred ceeeeeeecCCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCC--cEeEEecCCCceeEEEECCCCCEEEEE
Confidence 0112233458889988876554322 35899999998 8888888888899999999997 345
Q ss_pred EEeCCceEEEEEccccceEEeecccccceeeEEe
Q psy14906 519 VCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADF 552 (583)
Q Consensus 519 ~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~ 552 (583)
++..++.|++||..+++.+..++.... .+.|++
T Consensus 332 s~~~~~~v~v~D~~tgk~~~~i~~g~~-P~~l~~ 364 (368)
T d1mdah_ 332 NSAGTEVLDIYDAASDQDQSSVELDKG-PESLSV 364 (368)
T ss_dssp EETTTTEEEEEESSSCEEEEECCCCSC-CCEEEC
T ss_pred EeCCCCeEEEEECCCCCEEEEEECCCC-CCEEEE
Confidence 667789999999999999998875433 444444
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.71 E-value=1.4e-15 Score=146.90 Aligned_cols=236 Identities=11% Similarity=0.027 Sum_probs=145.6
Q ss_pred cEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeec-----CCCCCCeEEEEe--eCeEEEEEc----------CCeEEE
Q psy14906 34 VVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVS-----PQHEDDITCLSS--DFFHIYTSA----------NNIIYA 96 (583)
Q Consensus 34 ~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~-----~~h~~~v~~~~~--~~~~~~~~~----------~~~i~v 96 (583)
..++|++++. +++..++.+.+||+++++....+ ..|...|.++++ |++.|+... ++.+.+
T Consensus 20 ~~~~W~~d~~---~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l 96 (470)
T d2bgra1 20 YSLRWISDHE---YLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (470)
T ss_dssp CCCEECSSSE---EEEESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred cCCEeCCCCE---EEEEcCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEE
Confidence 4567887764 34567899999999998776544 445677888766 776555432 457899
Q ss_pred EeccceeeeeecccCccEEEE--ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEec-------ccCCcceEE
Q psy14906 97 WRRGIDIVGTYKGHTSPVHLI--LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMG-------KRWNSCVNV 167 (583)
Q Consensus 97 w~~~~~~~~~~~~h~~~v~~i--s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~~ 167 (583)
||+....+..+..|...+... ||||++||... ++.+.+|+..+++...............+ ....+....
T Consensus 97 ~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~ 175 (470)
T d2bgra1 97 YDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSA 175 (470)
T ss_dssp EETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred EECCCCcccccccCCccccccccccCcceeeEee-cccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccc
Confidence 999887788899999888875 99999999965 78999999999876654432211111111 012334566
Q ss_pred EeeCCCCCEEEEEecCCe-EEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhh--
Q psy14906 168 LEPSPVVDIIGVGLSNKK-IILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK-- 244 (583)
Q Consensus 168 ~~~s~~~~~l~~~~~d~~-i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-- 244 (583)
+.|||||+.||....|.+ +..|.+...... .........+.+...+. ...+..+.+|++..++......
T Consensus 176 ~~wSPDGk~ia~~~~d~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~g~-----~~~~~~~~v~~~~~~~~~~~~~~~ 247 (470)
T d2bgra1 176 LWWSPNGTFLAYAQFNDTEVPLIEYSFYSDE---SLQYPKTVRVPYPKAGA-----VNPTVKFFVVNTDSLSSVTNATSI 247 (470)
T ss_dssp EEECTTSSEEEEEEEECTTCCEEEEEECCST---TCSSCEEEEEECCBTTS-----CCCEEEEEEEEGGGCCSSSCCCEE
T ss_pred cEECCCCCccceeEecCCcCceEEEEeeccC---CCCCCeeeeeccccccc-----cCCcceEEEEECCCcceeeecccc
Confidence 889999999999876543 544443211000 00111222222222222 1223457888887665433220
Q ss_pred --------hccccceEEEEEecCCCEEEEEe-CC---CeEEEEEccCCC
Q psy14906 245 --------KAHRKVVTGAHFLYNEPLLVTSS-PD---NTLKLWIFDKAD 281 (583)
Q Consensus 245 --------~~~~~~v~~~~~~~~~~~l~s~~-~d---~~i~~w~~~~~~ 281 (583)
......+..+.|.+++..++... .. ..+.+++++...
T Consensus 248 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~r~~~~~~~~~~~~d~~t 296 (470)
T d2bgra1 248 QITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (470)
T ss_dssp EECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred ccCCccccCCCCceEEEEEEcCCCceeEEEeeccCCceEEEEEEecCCC
Confidence 12334567889999987665432 22 245667666543
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.68 E-value=2.6e-17 Score=151.24 Aligned_cols=342 Identities=11% Similarity=-0.015 Sum_probs=206.5
Q ss_pred ceEEEEe--eCCeEEEEecCCcEEEeecCCCCCCeEEEEeeCeEEEEEcCCeEEEEeccceeeeeecccCccEEEE--cc
Q psy14906 44 ETLFVTC--VGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHLI--LP 119 (583)
Q Consensus 44 ~~~i~~~--~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~i--s~ 119 (583)
+++++.+ .++.|.+||+.+++.+++++- +++++....+..+.+.+++... ........|....... +|
T Consensus 10 e~y~f~Sgg~sG~V~V~dlpS~r~l~~IpV-------fspd~~~g~g~~~es~~vl~~~-~~~~~gd~hhP~~s~t~gtp 81 (441)
T d1qnia2 10 EYYGFWSGGHQGEVRVLGVPSMRELMRIPV-------FNVDSATGWGITNESKEILGGD-QQYLNGDCHHPHISMTDGRY 81 (441)
T ss_dssp SEEEEEECBTTCCEEEEEETTTEEEEEECS-------SSBCTTTCTTTSHHHHHHHCSS-SCCSCCCBCCCEEEEETTEE
T ss_pred CEEEEEeCCCCCcEEEEeCCCCcEEEEEEe-------EcCCCCEEEEECCccceEEecc-cccccCcccCCCcceecccC
Confidence 3444433 688999999999999988752 2223322222111111111111 1111123344444444 89
Q ss_pred CCCEEEEEe-CCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCC--EEEEEecCC------------
Q psy14906 120 FGPHLISVD-EESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVD--IIGVGLSNK------------ 184 (583)
Q Consensus 120 ~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~~d~------------ 184 (583)
||++|++.. .+++|.++|+++++....+.. .....+..++|+|+++ +++..+.+.
T Consensus 82 DGr~lfV~d~~~~rVavIDl~t~k~~~ii~i----------P~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~ 151 (441)
T d1qnia2 82 DGKYLFINDKANTRVARIRLDIMKTDKITHI----------PNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSL 151 (441)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEEC----------TTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCG
T ss_pred CCCEEEEEcCCCCEEEEEECCCCcEeeEEec----------CCCCCccceEEeccCCEEEEEeccCCcccccCccccccc
Confidence 999997765 578999999999998887763 4567899999999999 444444332
Q ss_pred -----eEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCC-CcEEEEeCCCCeehhhhhhccccceEEEEEec
Q psy14906 185 -----KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNT-GHLTVWNLEDRQVENQIKKAHRKVVTGAHFLY 258 (583)
Q Consensus 185 -----~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-g~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~ 258 (583)
.+..+|..+.+...++... +....+.|+|+|+ ++++.+.+ ..+..++..+.+....+ .. ......++++|
T Consensus 152 ~~~~~~~~~iD~~t~~v~~qI~v~-~~p~~v~~spdGk-~a~vt~~nse~~~~id~~t~~~~d~i-~v-~n~p~~~~~~~ 227 (441)
T d1qnia2 152 DNSYTMFTAIDAETMDVAWQVIVD-GNLDNTDADYTGK-YATSTCYNSERAVDLAGTMRNDRDWV-VV-FNVERIAAAVK 227 (441)
T ss_dssp GGEEEEEEEEETTTCSEEEEEEES-SCCCCEEECSSSS-EEEEEESCTTCCSSHHHHTCSSBCEE-EE-EEHHHHHHHHH
T ss_pred ccccceEEeecCccceeeEEEecC-CCccceEECCCCC-EEEEEecCCCceEEEeccCcceEEEE-Ee-CCccceEEEec
Confidence 2355888888888877766 5688999999999 55555443 33433333333222221 00 01112234568
Q ss_pred CCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEE-EeeCCCcEEEEEccccccceeeccch
Q psy14906 259 NEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNIL-SAAGDSTLRIFNTKSETSNKNLGIAS 337 (583)
Q Consensus 259 ~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~ 337 (583)
+|+++..+ .++.+.++... ....+..+..... ...+.++| ||++++ ++..++++.+||+++.... +..
T Consensus 228 dGk~~~v~-~~~v~vvd~~~----~~~v~~~IPvgks-PhGv~vSP-DGkyl~~~~~~~~tvsv~d~~k~~~~--~~~-- 296 (441)
T d1qnia2 228 AGNFKTIG-DSKVPVVDGRG----ESEFTRYIPVPKN-PHGLNTSP-DGKYFIANGKLSPTVSVIAIDKLDDL--FED-- 296 (441)
T ss_dssp TTCCBCCT-TCCCCEEECSS----SCSSEEEECCBSS-CCCEEECT-TSCEEEEECTTSSBEEEEEGGGHHHH--TTT--
T ss_pred CCCEEEeC-CCCcEEEEccc----CCceEEEEeCCCC-ccCceECC-CCCEEEEeCCcCCcEEEEEeehhhhH--hhc--
Confidence 89877654 46777777322 3345556655544 57899998 788765 5667999999998753211 000
Q ss_pred hhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceE
Q psy14906 338 ANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTC 417 (583)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 417 (583)
.+.....+.... + ..-....
T Consensus 297 -------------------~~~~~~~~~~~~------------------------------------~-----~glgplh 316 (441)
T d1qnia2 297 -------------------KIELRDTIVAEP------------------------------------E-----LGLGPLH 316 (441)
T ss_dssp -------------------SSCGGGGEEECC------------------------------------B-----CCSCEEE
T ss_pred -------------------cCCcceEEEeec------------------------------------c-----cccCccc
Confidence 000000000000 0 0012345
Q ss_pred EEEccCCcEEEEEecCceEEEEEcccC------c----cccccCCCCCCCcccCeeEEEEeCCCcEEEEee
Q psy14906 418 VYITHCGNFVLIGYSSGHVDRFNIQSG------A----HRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG 478 (583)
Q Consensus 418 ~~~s~~~~~l~~~~~dg~i~i~d~~~~------~----~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 478 (583)
.+|+++|..+.+...|..|..|++... . ....+...-..+|...+.+.+++|||++|++++
T Consensus 317 ~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~ 387 (441)
T d1qnia2 317 TTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLS 387 (441)
T ss_dssp EEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEE
T ss_pred ceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecC
Confidence 679999998888899999999997521 1 111221111258888888999999999999994
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.45 E-value=4.3e-11 Score=109.98 Aligned_cols=164 Identities=7% Similarity=0.043 Sum_probs=106.2
Q ss_pred CCceEEEEccCCcEEEEEec-CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEee-cCCcEEEEEccC
Q psy14906 413 SKPTCVYITHCGNFVLIGYS-SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGG-NDQTVKVWHFKQ 490 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~ 490 (583)
..+.++.|+|||+++++... ...|.+|+......+...............+.++|+|++++++... .+++|.+|++..
T Consensus 145 ~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~ 224 (365)
T d1jofa_ 145 TGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDP 224 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecC
Confidence 45789999999998888764 4578888865432221110000023456789999999999875554 678999999987
Q ss_pred CCCCceEEeec------------------cCCeeeEEeccCCcEEEEEeC------CceEEEEEccccceEEe------e
Q psy14906 491 TGKPPLRSIKL------------------DNGISFFRTHQESSMLAVCLD------DFTVNIIDIDTCTIIRK------L 540 (583)
Q Consensus 491 ~~~~~~~~~~~------------------~~~v~~~~~s~~~~~l~~~~~------dg~i~i~d~~~~~~~~~------~ 540 (583)
........... ......+.++|||++|+++.. ...|..|++.....+.. .
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~ 304 (365)
T d1jofa_ 225 ATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT 304 (365)
T ss_dssp TTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC
T ss_pred CCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEE
Confidence 63222222110 112457899999999888743 23477777754322211 1
Q ss_pred cccccceeeEEecC-CCcEEEEE-eCCCeEEEEeCCCc
Q psy14906 541 SGHMGQLTDADFSP-DSRWLITA-SMDCTIRVWDIPSS 576 (583)
Q Consensus 541 ~~h~~~v~~l~~s~-d~~~l~s~-~~d~~i~vw~~~~~ 576 (583)
........+++++| +|++|+.+ ..++.|.+|+++..
T Consensus 305 ~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~ 342 (365)
T d1jofa_ 305 PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEeCC
Confidence 12334567899998 89988766 46789999987644
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.33 E-value=1.1e-09 Score=103.58 Aligned_cols=369 Identities=11% Similarity=0.022 Sum_probs=200.9
Q ss_pred EeeCCCCCEEEEEecCCeEEEEEccCCceeEEEecc---CCCeEEEEEecCCCCEEEEE--------cCCCcEEEEeCCC
Q psy14906 168 LEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQT---WGPVTALSFRTDGPPMMVSG--------SNTGHLTVWNLED 236 (583)
Q Consensus 168 ~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~s~--------~~dg~i~vwd~~~ 236 (583)
..|.+++.++. -..+|.|.+||+.+++....+... .-.+....||||++++|+.. +..+.+.++|+.+
T Consensus 22 ~~W~~~~~~~~-~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~ 100 (465)
T d1xfda1 22 AKWISDTEFIY-REQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH 100 (465)
T ss_dssp CCBSSSSCBCC-CCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred CEEeCCCcEEE-EeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccC
Confidence 46888887654 356788999999988775555432 23677888999999544443 3357789999998
Q ss_pred Ceehhhh-hhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCC-----------------CCe
Q psy14906 237 RQVENQI-KKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSA-----------------PPN 298 (583)
Q Consensus 237 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~-----------------~v~ 298 (583)
++..... .......+....|||||+.+|... ++.+.+.+. ..+....+ +..+... .-.
T Consensus 101 ~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~--~~~~~~~l-t~~g~~~~i~nG~~d~vyeee~~~~~~ 176 (465)
T d1xfda1 101 GDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAH--VGKQAIRV-VSTGKEGVIYNGLSDWLYEEEILKTHI 176 (465)
T ss_dssp CCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESS--SSSCCEEE-ECCCBTTTEEEEECCHHHHHTTSSSSE
T ss_pred CceeeccCccCCccccceeeeccCCceEEEEe-cceEEEEec--CCCceEEE-ecccCcceeeccccchhhhhhhccccc
Confidence 7643321 023344566788999999998876 566666643 32222211 1111111 124
Q ss_pred eEEEeeCCCCEEEEeeC-CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccE
Q psy14906 299 YIQFYGNSSDNILSAAG-DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNI 377 (583)
Q Consensus 299 ~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (583)
.+-|+| ||++|+.... +..+..+.+..... ...+....+........
T Consensus 177 a~~WSP-Dgk~iaf~~~D~s~V~~~~~~~~~~--------------------------~~~p~~~~~~Yp~~G~~----- 224 (465)
T d1xfda1 177 AHWWSP-DGTRLAYAAINDSRVPIMELPTYTG--------------------------SIYPTVKPYHYPKAGSE----- 224 (465)
T ss_dssp EEEECT-TSSEEEEEEEECTTSCEEEECCCSS--------------------------SSSCCCEEEECCBTTSC-----
T ss_pred eEEECC-CCCeEEEEEecccccceeecccccc--------------------------cccceeeeeeccccCCC-----
Confidence 677897 8988887653 34444444322100 00001111111111000
Q ss_pred EEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec----CceEEEEEcccCccccccCCC
Q psy14906 378 AAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS----SGHVDRFNIQSGAHRGSYGHD 453 (583)
Q Consensus 378 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~ 453 (583)
.....+.++++...........+. ........+..+.|+|++++++.... ...+.++|..+++....+.
T Consensus 225 ----np~~~l~v~d~~~~~~~~~~~~~~-~~~~~~~y~~~~~W~~d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~-- 297 (465)
T d1xfda1 225 ----NPSISLHVIGLNGPTHDLEMMPPD-DPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHE-- 297 (465)
T ss_dssp ----CCEEEEEEEESSSSCCCEECCCCC-CGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEE--
T ss_pred ----CCceeEEEEecCCCcEEEEEeccC-cCccccceeeeeEEcCCCeEEEEEEccccccceEEEEcCCCCcEEEEEE--
Confidence 001245666665543322211111 11112235778899999987766443 2368889999887765542
Q ss_pred CCCCcccC----eeEEEEeCCCcEEEE---eecCC--cEEEEEccCC----CCCceEEe-eccCCeeeE-EeccCCcEEE
Q psy14906 454 NQPGHVGG----VRGVVSDNLNQIVIS---GGNDQ--TVKVWHFKQT----GKPPLRSI-KLDNGISFF-RTHQESSMLA 518 (583)
Q Consensus 454 ~~~~h~~~----v~~~~~s~~~~~l~s---~~~dg--~i~iwd~~~~----~~~~~~~~-~~~~~v~~~-~~s~~~~~l~ 518 (583)
...... -....|+|||+.++. .-.+| .+....+... .......+ .+.-.|..+ .|.++++.+.
T Consensus 298 --e~~~~wv~~~~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vy 375 (465)
T d1xfda1 298 --DESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIY 375 (465)
T ss_dssp --EECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEE
T ss_pred --EcCCceEeccCCceeEccCCCeeEEEEeeeecccCceEEEEeccccccCCCceeEEeccCCceEEEEEEEcCCCCEEE
Confidence 111222 234678999984432 22233 3444333211 00222222 233355554 6888877554
Q ss_pred -EEeCC--ceEEEE--EccccceEEeec---ccccceeeEEecCCCcEEEEEeCC---CeEEEEeCCCccccccc
Q psy14906 519 -VCLDD--FTVNII--DIDTCTIIRKLS---GHMGQLTDADFSPDSRWLITASMD---CTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 519 -~~~~d--g~i~i~--d~~~~~~~~~~~---~h~~~v~~l~~s~d~~~l~s~~~d---~~i~vw~~~~~~~~~~~ 582 (583)
++..+ +.-++| ++..+.....+. ........+.|||++++++..... -.+.+++..+++.+..|
T Consensus 376 F~a~~~~p~~~hly~v~l~g~~~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~~~~~~~~~L 450 (465)
T d1xfda1 376 FLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDL 450 (465)
T ss_dssp EEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCEEEEE
T ss_pred EEEeCCCCCceEEEEEECCCCCcceeeccccCCCCCEEEEEECCCCCEEEEEeecCCCCeEEEEECCCCCEEEEE
Confidence 44433 233344 444333222222 244567899999999998844332 36788898888888766
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=99.31 E-value=5.5e-09 Score=93.07 Aligned_cols=250 Identities=15% Similarity=0.111 Sum_probs=155.7
Q ss_pred ceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEE
Q psy14906 195 ESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKL 274 (583)
Q Consensus 195 ~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~ 274 (583)
+.+..+... ..+..+++.|||+ ++++...+++|..|+...... .+ ......+.+++|+++|+++++...++.+..
T Consensus 19 ~v~~~~p~~-~~~e~iAv~pdG~-l~vt~~~~~~I~~i~p~g~~~--~~-~~~~~~~~gla~~~dG~l~v~~~~~~~~~~ 93 (302)
T d2p4oa1 19 KIITSFPVN-TFLENLASAPDGT-IFVTNHEVGEIVSITPDGNQQ--IH-ATVEGKVSGLAFTSNGDLVATGWNADSIPV 93 (302)
T ss_dssp EEEEEECTT-CCEEEEEECTTSC-EEEEETTTTEEEEECTTCCEE--EE-EECSSEEEEEEECTTSCEEEEEECTTSCEE
T ss_pred cEEEECCCC-CCcCCEEECCCCC-EEEEeCCCCEEEEEeCCCCEE--EE-EcCCCCcceEEEcCCCCeEEEecCCceEEE
Confidence 344445433 4688999999999 899999999999998664322 22 345678999999999999998888888888
Q ss_pred EEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhcccc
Q psy14906 275 WIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNE 354 (583)
Q Consensus 275 w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (583)
++.....+....+.... .......+.+.+ +++++++.+.++.+..+|...+.
T Consensus 94 ~~~~~~~~~~~~~~~~~-~~~~~n~i~~~~-~g~~~v~~~~~~~i~~~~~~~~~-------------------------- 145 (302)
T d2p4oa1 94 VSLVKSDGTVETLLTLP-DAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPS-------------------------- 145 (302)
T ss_dssp EEEECTTSCEEEEEECT-TCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTE--------------------------
T ss_pred EEecccccceeeccccC-CccccceeEEcc-CCCEEeeccccccceeeeccCCc--------------------------
Confidence 86654433333322222 234456777775 66666666666666666654321
Q ss_pred ccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCc
Q psy14906 355 KFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSG 434 (583)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 434 (583)
T Consensus 146 -------------------------------------------------------------------------------- 145 (302)
T d2p4oa1 146 -------------------------------------------------------------------------------- 145 (302)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCC-ceEEeeccCCeeeEEeccC
Q psy14906 435 HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKP-PLRSIKLDNGISFFRTHQE 513 (583)
Q Consensus 435 ~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~v~~~~~s~~ 513 (583)
..+|-.......... .........+.++. +.++++....+.|..++....... .............+++.++
T Consensus 146 -~~~~~~~~~~~~~~~-----~~~~~~~ngi~~~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~d 218 (302)
T d2p4oa1 146 -GSIWLEHPMLARSNS-----ESVFPAANGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVE 218 (302)
T ss_dssp -EEEEEECGGGSCSST-----TCCSCSEEEEEEET-TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTT
T ss_pred -ceeEecCCccceeec-----cCcccccccccccC-CceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCC
Confidence 111110000000000 12233455666654 345555667788888887654211 1223334456788999999
Q ss_pred CcEEEEEeCCceEEEEEccccc-eEEeecccccceeeEEe---cCCCcEEEEEeC
Q psy14906 514 SSMLAVCLDDFTVNIIDIDTCT-IIRKLSGHMGQLTDADF---SPDSRWLITASM 564 (583)
Q Consensus 514 ~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~h~~~v~~l~~---s~d~~~l~s~~~ 564 (583)
|+++++...+++|..++..... .+......-...++++| ++|++.|..++.
T Consensus 219 G~l~va~~~~~~V~~i~p~G~~~~~~~~~~~~~~pt~vafg~~~~D~~~Lyvtt~ 273 (302)
T d2p4oa1 219 GNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 273 (302)
T ss_dssp CCEEEECBTTCCEEEECTTCCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred CCEEEEEcCCCcEEEECCCCCEEEEEecCCCCCCceEEEEcCCCCCCCEEEEECC
Confidence 9988888888999999876432 23333434456889999 678888765543
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.29 E-value=4.5e-09 Score=92.35 Aligned_cols=159 Identities=20% Similarity=0.271 Sum_probs=118.5
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCC
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG 492 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 492 (583)
.....+++.++|+++++....+.+.+++.. ++.+..+.. ..+......+++.++++.+++....+.|++||...
T Consensus 114 ~~p~~~avd~~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~---~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G-- 187 (279)
T d1q7fa_ 114 QHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGC---SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-- 187 (279)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC---TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC--
T ss_pred cccceeccccCCcEEEEeeccceeeEeccC-Cceeecccc---cccccccceeeeccceeEEeeeccccceeeeecCC--
Confidence 456788899999988888888888888754 444444422 35667788999999999988888889999999765
Q ss_pred CCceEEeecc---CCeeeEEeccCCcEEEEEeC-CceEEEEEccccceEEeeccc--ccceeeEEecCCCcEEEEEeCCC
Q psy14906 493 KPPLRSIKLD---NGISFFRTHQESSMLAVCLD-DFTVNIIDIDTCTIIRKLSGH--MGQLTDADFSPDSRWLITASMDC 566 (583)
Q Consensus 493 ~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~h--~~~v~~l~~s~d~~~l~s~~~d~ 566 (583)
+.+..+... .....+++.++|+++++-.. ++.|.+|+. +|+.+..+... ......|++.|||.+++ ++.++
T Consensus 188 -~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~~~~~~~p~~vav~~dG~l~V-~~~n~ 264 (279)
T d1q7fa_ 188 -QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVL-ASKDY 264 (279)
T ss_dssp -CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEE-EETTT
T ss_pred -ceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeCCCCCCCEeEEEEeCCCcEEE-EeCCC
Confidence 556555432 35788999999997776544 457999984 57777666432 24578899999997655 55789
Q ss_pred eEEEEeCCCccccc
Q psy14906 567 TIRVWDIPSSQLID 580 (583)
Q Consensus 567 ~i~vw~~~~~~~~~ 580 (583)
.|++|......++.
T Consensus 265 ~v~~fr~~~~~~~~ 278 (279)
T d1q7fa_ 265 RLYIYRYVQLAPVG 278 (279)
T ss_dssp EEEEEECSCCCCTT
T ss_pred eEEEEEeeeecCCC
Confidence 99999998776653
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.27 E-value=1.4e-09 Score=95.41 Aligned_cols=237 Identities=12% Similarity=0.156 Sum_probs=138.7
Q ss_pred eEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCC--cEEEEeCCCCeehhhhhhccccceEEEEEecCCCE
Q psy14906 185 KIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTG--HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPL 262 (583)
Q Consensus 185 ~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 262 (583)
.|.|.|.. |.....+..+...+...+|||||+++.++....+ .+.+.+...+..... ..+........|+|+|+.
T Consensus 20 ~l~i~d~d-G~~~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~spdg~~ 96 (269)
T d2hqsa1 20 ELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV--ASFPRHNGAPAFSPDGSK 96 (269)
T ss_dssp EEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEE--ECCSSCEEEEEECTTSSE
T ss_pred EEEEEcCC-CCCcEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEE--eeeecccccceecCCCCe
Confidence 58888876 5444455544588899999999995545554444 366666665554333 356778889999999998
Q ss_pred EEEEeC-CCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEE--Eccccccceeeccchhh
Q psy14906 263 LVTSSP-DNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLRIF--NTKSETSNKNLGIASAN 339 (583)
Q Consensus 263 l~s~~~-d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~~ 339 (583)
++.... ++...++..... ... ...............+++.....+++...+|...+| ++..+......
T Consensus 97 i~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~------ 167 (269)
T d2hqsa1 97 LAFALSKTGSLNLYVMDLA--SGQ-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT------ 167 (269)
T ss_dssp EEEEECTTSSCEEEEEETT--TCC-EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECC------
T ss_pred eeEeeecCCccceeecccc--ccc-ceeeeeccccccccccccccccceecccccCCceEeeeecccccceeee------
Confidence 887654 333333322221 111 222222333334445554333344444445544444 33332111100
Q ss_pred hhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEE
Q psy14906 340 RNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVY 419 (583)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 419 (583)
..........
T Consensus 168 ----------------------------------------------------------------------~~~~~~~~~~ 177 (269)
T d2hqsa1 168 ----------------------------------------------------------------------WEGSQNQDAD 177 (269)
T ss_dssp ----------------------------------------------------------------------CSSSEEEEEE
T ss_pred ----------------------------------------------------------------------cccccccccc
Confidence 0013455678
Q ss_pred EccCCcEEEEEecCc---eEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec---CCcEEEEEccCCCC
Q psy14906 420 ITHCGNFVLIGYSSG---HVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN---DQTVKVWHFKQTGK 493 (583)
Q Consensus 420 ~s~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---dg~i~iwd~~~~~~ 493 (583)
++|+++.++..+.++ .+.+.+...+.. .. ..+........|+|||+.|+..+. ...|.+++++..
T Consensus 178 ~spdg~~~~~~~~~~~~~~i~~~~~~~~~~--~~-----~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~-- 248 (269)
T d2hqsa1 178 VSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QV-----LSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR-- 248 (269)
T ss_dssp ECTTSSEEEEEEECSSCEEEEEEETTTCCE--EE-----CCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC--
T ss_pred cccccceeEEEeecCCceeeeEeecccccc--eE-----eecCccccceEECCCCCEEEEEEcCCCCcEEEEEECCCC--
Confidence 999999888766543 344455544443 22 234556778899999998875553 346889999876
Q ss_pred CceEEeeccCCeeeEEecc
Q psy14906 494 PPLRSIKLDNGISFFRTHQ 512 (583)
Q Consensus 494 ~~~~~~~~~~~v~~~~~s~ 512 (583)
...+.......+...+|||
T Consensus 249 ~~~~lt~~~g~~~~p~WSP 267 (269)
T d2hqsa1 249 FKARLPATDGQVKFPAWSP 267 (269)
T ss_dssp CEEECCCSSSEEEEEEECC
T ss_pred CEEEEeCCCCcEEeEEeCC
Confidence 5555555556777888988
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.26 E-value=1.7e-09 Score=94.01 Aligned_cols=154 Identities=8% Similarity=-0.013 Sum_probs=108.3
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCC
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTG 492 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 492 (583)
..+..++++++++++++-..+..+..++.......... ........+++++++++++++...++.|..++.+..
T Consensus 98 ~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~-----~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~- 171 (260)
T d1rwia_ 98 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP-----FTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN- 171 (260)
T ss_dssp CSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECC-----CCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTC-
T ss_pred eecccccccccceeEeeccccccccccccccceeeeee-----ecccCCcceeeecCCCCEeeeccccccccccccccc-
Confidence 45678999999998888777777888876554432221 122345678999999998888888889999997764
Q ss_pred CCceEE-eeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccceeeEEecCCCcEEEEEeCCCeEEEE
Q psy14906 493 KPPLRS-IKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQLTDADFSPDSRWLITASMDCTIRVW 571 (583)
Q Consensus 493 ~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw 571 (583)
..... .........+++.++|+++++....+.|..++.............-.....|+++++|.++++-..+++|+..
T Consensus 172 -~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i 250 (260)
T d1rwia_ 172 -NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKL 250 (260)
T ss_dssp -CEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEE
T ss_pred -eeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEEEccCCCCCeEEEEEeCCCCEEEEECCCCEEEEE
Confidence 22222 1223567889999999988888888899988876543322222233457899999999988876777766655
Q ss_pred eC
Q psy14906 572 DI 573 (583)
Q Consensus 572 ~~ 573 (583)
+.
T Consensus 251 ~~ 252 (260)
T d1rwia_ 251 TS 252 (260)
T ss_dssp CC
T ss_pred eC
Confidence 53
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.26 E-value=1.7e-08 Score=92.32 Aligned_cols=278 Identities=10% Similarity=-0.001 Sum_probs=156.4
Q ss_pred eCCeE--EEEecCCcEEE--ee-cCCCCCCeEEEEe--eCeEEEEEcCCeEEEEecc--ceeeeee--cccCccE-EEEc
Q psy14906 51 VGKAF--HVYGCNHFKLL--SV-SPQHEDDITCLSS--DFFHIYTSANNIIYAWRRG--IDIVGTY--KGHTSPV-HLIL 118 (583)
Q Consensus 51 ~~~~i--~v~d~~~~~~~--~~-~~~h~~~v~~~~~--~~~~~~~~~~~~i~vw~~~--~~~~~~~--~~h~~~v-~~is 118 (583)
.++.| ..+|.+++++- .. .......+.-|++ +++++.+...+.+..|.++ +...... .....+. ..++
T Consensus 12 ~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~s~d~~~ly~~~~~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~ 91 (365)
T d1jofa_ 12 PPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDAD 91 (365)
T ss_dssp SSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTT
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEEcCCCCEEEEEeCCcEEEEEEeCCCCeEEEeeecCCCCcEEEEEC
Confidence 34455 45566666543 22 1234444555665 6788877777888888763 2222211 1111221 1238
Q ss_pred cCCCE--EEEEe-CCCcEEEEEcCC-CcEEEEeeccCCce--EE---ecccCCcceEEEeeCCCCCEEEEEec-CCeEEE
Q psy14906 119 PFGPH--LISVD-EESNVKVWDIKA-EETYLELSFDNDTF--KI---MGKRWNSCVNVLEPSPVVDIIGVGLS-NKKIIL 188 (583)
Q Consensus 119 ~~~~~--l~s~~-~dg~i~iwd~~~-~~~~~~~~~~~~~~--~~---~~~~~~~~i~~~~~s~~~~~l~~~~~-d~~i~i 188 (583)
++++. ++++. ..+.+..+.+.. +............. .. ........+.+++|+|||++|+++.. ...|.+
T Consensus 92 ~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~ 171 (365)
T d1jofa_ 92 TNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWT 171 (365)
T ss_dssp SCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCCEEEEEEecCCCCEEEEeEccCCCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEE
Confidence 88874 44432 245666655432 11111111110000 00 00123445789999999998887754 457888
Q ss_pred EEccCCceeE---EEe--ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhh------------------h
Q psy14906 189 HNILTDESLM---EFI--QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK------------------K 245 (583)
Q Consensus 189 w~~~~~~~~~---~~~--~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~------------------~ 245 (583)
|+......+. ... ........++|+|+++.+.++...+++|.+|++..++...... .
T Consensus 172 ~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (365)
T d1jofa_ 172 HRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETG 251 (365)
T ss_dssp EEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTS
T ss_pred EEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccc
Confidence 8765432221 111 2345789999999999555667778999999987653221110 1
Q ss_pred ccccceEEEEEecCCCEEEEEeC------CCeEEEEEccCCCCCceee--EEeccCCCCCeeEEEeeCCCCEEEEe-eCC
Q psy14906 246 AHRKVVTGAHFLYNEPLLVTSSP------DNTLKLWIFDKADGNGRLL--RIREGHSAPPNYIQFYGNSSDNILSA-AGD 316 (583)
Q Consensus 246 ~~~~~v~~~~~~~~~~~l~s~~~------d~~i~~w~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~l~~~-~~d 316 (583)
.+......+.++|||++|+++.. ...|..|+++......+.. ............++++|.+|++|+++ ..+
T Consensus 252 ~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s 331 (365)
T d1jofa_ 252 KGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQE 331 (365)
T ss_dssp SBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSS
T ss_pred cccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCC
Confidence 12234567899999999888743 2347777665422111111 11122334567899987678877666 467
Q ss_pred CcEEEEEccccc
Q psy14906 317 STLRIFNTKSET 328 (583)
Q Consensus 317 g~i~iwd~~~~~ 328 (583)
+.|.+|++....
T Consensus 332 ~~v~v~~~~~~~ 343 (365)
T d1jofa_ 332 GWLEIYRWKDEF 343 (365)
T ss_dssp CEEEEEEEETTE
T ss_pred CeEEEEEEeCCc
Confidence 999999886543
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.25 E-value=7.9e-09 Score=90.55 Aligned_cols=238 Identities=11% Similarity=0.083 Sum_probs=143.0
Q ss_pred cEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCC---eEEEEEccCCceeEEEeccCCCeE
Q psy14906 132 NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNK---KIILHNILTDESLMEFIQTWGPVT 208 (583)
Q Consensus 132 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~---~i~iw~~~~~~~~~~~~~~~~~v~ 208 (583)
.|.|-|.+........ .....+...+|||||+.||...... .+.+.+...+... .+..+.....
T Consensus 20 ~l~i~d~dG~~~~~l~------------~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 86 (269)
T d2hqsa1 20 ELRVSDYDGYNQFVVH------------RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNG 86 (269)
T ss_dssp EEEEEETTSCSCEEEE------------EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEE
T ss_pred EEEEEcCCCCCcEEEe------------cCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCcee-EEeeeecccc
Confidence 5777777654433333 4466788999999999999875543 4777777655544 4455558889
Q ss_pred EEEEecCCCCEEEEEcCCCcEEEEeC--CCCeehhhhhhccccceEEEEEecCCCEEEE-EeCCCeEEEEEccCCCCCce
Q psy14906 209 ALSFRTDGPPMMVSGSNTGHLTVWNL--EDRQVENQIKKAHRKVVTGAHFLYNEPLLVT-SSPDNTLKLWIFDKADGNGR 285 (583)
Q Consensus 209 ~~~~~~~~~~~l~s~~~dg~i~vwd~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~d~~i~~w~~~~~~~~~~ 285 (583)
...|+|+|+.+++....++...++.. ......... ..........+++++..++. ...++...+|..+....
T Consensus 87 ~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~--- 161 (269)
T d2hqsa1 87 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVT--DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG--- 161 (269)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECC--CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS---
T ss_pred cceecCCCCeeeEeeecCCccceeecccccccceeee--eccccccccccccccccceecccccCCceEeeeecccc---
Confidence 99999999955555544544433333 222222222 33444455667777765444 44566666665554432
Q ss_pred eeEEeccCCCCCeeEEEeeCCCCEEEEeeC-CCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCcccee
Q psy14906 286 LLRIREGHSAPPNYIQFYGNSSDNILSAAG-DSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQF 364 (583)
Q Consensus 286 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (583)
.......+........|+| +++.++..+. .+...+|..........+.
T Consensus 162 ~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------------------------ 210 (269)
T d2hqsa1 162 APQRITWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQVL------------------------------ 210 (269)
T ss_dssp CCEECCCSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCCEEEC------------------------------
T ss_pred cceeeeccccccccccccc-ccceeEEEeecCCceeeeEeecccccceEe------------------------------
Confidence 2233344455566778887 6777666554 4444444433221111100
Q ss_pred eeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEec---CceEEEEEc
Q psy14906 365 SFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS---SGHVDRFNI 441 (583)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~---dg~i~i~d~ 441 (583)
..........|+|||+.|+..+. ...|+++++
T Consensus 211 ---------------------------------------------~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~ 245 (269)
T d2hqsa1 211 ---------------------------------------------SSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST 245 (269)
T ss_dssp ---------------------------------------------CCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred ---------------------------------------------ecCccccceEECCCCCEEEEEEcCCCCcEEEEEEC
Confidence 00134567789999999886554 357889999
Q ss_pred ccCccccccCCCCCCCcccCeeEEEEeC
Q psy14906 442 QSGAHRGSYGHDNQPGHVGGVRGVVSDN 469 (583)
Q Consensus 442 ~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 469 (583)
..+.... + ....+.+...+|+|
T Consensus 246 dg~~~~~-l-----t~~~g~~~~p~WSP 267 (269)
T d2hqsa1 246 DGRFKAR-L-----PATDGQVKFPAWSP 267 (269)
T ss_dssp TSCCEEE-C-----CCSSSEEEEEEECC
T ss_pred CCCCEEE-E-----eCCCCcEEeEEeCC
Confidence 8766543 4 35567788899998
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.24 E-value=2.1e-09 Score=93.39 Aligned_cols=239 Identities=9% Similarity=0.031 Sum_probs=150.7
Q ss_pred CcceEEEeeCCCCCEEEEE-ecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeeh
Q psy14906 162 NSCVNVLEPSPVVDIIGVG-LSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE 240 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 240 (583)
.-....++++++|+..++. ...+.+..++...................+++++++. ++++....+.+++++..+...+
T Consensus 13 ~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~~g~-i~v~d~~~~~i~~~~~~~~~~~ 91 (260)
T d1rwia_ 13 RLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDFNNRVVTLAAGSNNQTV 91 (260)
T ss_dssp CCCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECTTCC-EEEEETTTEEEEECTTCSCCEE
T ss_pred cCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEEcCCCC-EEEeeeeeceeeeeeeccceee
Confidence 3455899999999976665 4456777776543322222122224567899999998 7777777777777766555544
Q ss_pred hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcEE
Q psy14906 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTLR 320 (583)
Q Consensus 241 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 320 (583)
... .......++++.++++++++-.....+..+ +.... ....... ........+++.+ +++.+++...++.|.
T Consensus 92 ~~~--~~~~~p~~iavd~~g~i~v~d~~~~~~~~~--~~~~~-~~~~~~~-~~~~~p~~i~~~~-~g~~~v~~~~~~~i~ 164 (260)
T d1rwia_ 92 LPF--DGLNYPEGLAVDTQGAVYVADRGNNRVVKL--AAGSK-TQTVLPF-TGLNDPDGVAVDN-SGNVYVTDTDNNRVV 164 (260)
T ss_dssp CCC--CSCCSEEEEEECTTCCEEEEEGGGTEEEEE--CTTCS-SCEECCC-CSCCSCCEEEECT-TCCEEEEEGGGTEEE
T ss_pred eee--eeeeecccccccccceeEeecccccccccc--ccccc-eeeeeee-cccCCcceeeecC-CCCEeeecccccccc
Confidence 333 233567899999999988776666666666 33221 1111111 2234557889986 677777777778888
Q ss_pred EEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccce
Q psy14906 321 IFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDM 400 (583)
Q Consensus 321 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 400 (583)
.++........ + ..
T Consensus 165 ~~d~~~~~~~~-~---------------------------------------------------------~~-------- 178 (260)
T d1rwia_ 165 KLEAESNNQVV-L---------------------------------------------------------PF-------- 178 (260)
T ss_dssp EECTTTCCEEE-C---------------------------------------------------------CC--------
T ss_pred ccccccceeee-e---------------------------------------------------------ec--------
Confidence 88865432110 0 00
Q ss_pred eeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecC
Q psy14906 401 FLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGND 480 (583)
Q Consensus 401 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 480 (583)
........++++++|+++++...++.|..++....... .+. ...-.....|+++++|+++++-..+
T Consensus 179 ---------~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~-~~~----~~~~~~P~~i~~d~~g~l~vad~~~ 244 (260)
T d1rwia_ 179 ---------TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST-VLP----FTGLNTPLAVAVDSDRTVYVADRGN 244 (260)
T ss_dssp ---------SSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCE-ECC----CCSCCCEEEEEECTTCCEEEEEGGG
T ss_pred ---------cccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEE-EEc----cCCCCCeEEEEEeCCCCEEEEECCC
Confidence 00145678999999998888888888988876544322 221 2333567899999999887776666
Q ss_pred CcEEEEEc
Q psy14906 481 QTVKVWHF 488 (583)
Q Consensus 481 g~i~iwd~ 488 (583)
++|+..+.
T Consensus 245 ~rI~~i~~ 252 (260)
T d1rwia_ 245 DRVVKLTS 252 (260)
T ss_dssp TEEEEECC
T ss_pred CEEEEEeC
Confidence 76665543
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=99.23 E-value=1e-08 Score=91.44 Aligned_cols=250 Identities=12% Similarity=0.115 Sum_probs=155.7
Q ss_pred cceEEEeeCCCCCEEEEEec-------CCeEEEEEccCCceeEEEecc----CCCeEEEEEecCCCCEEEEEcCCCcEEE
Q psy14906 163 SCVNVLEPSPVVDIIGVGLS-------NKKIILHNILTDESLMEFIQT----WGPVTALSFRTDGPPMMVSGSNTGHLTV 231 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~~~-------d~~i~iw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~s~~~dg~i~v 231 (583)
.....++|.++|++.++... +++|..||..+++........ .+....++|.+++. +++++.....+..
T Consensus 18 ~g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~~~dg~-~l~vad~~~~i~~ 96 (314)
T d1pjxa_ 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDAN-QLFVADMRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSS-EEEEEETTTEEEE
T ss_pred CCCeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEEeCCCC-EEEEEECCCeEEE
Confidence 44567899999998776432 467999998877654433221 23467899999998 6777766677888
Q ss_pred EeCCCCeehhhhh--hcc-ccceEEEEEecCCCEEEEEeC-------------CCeEEEEEccCCCCCceeeEEeccCCC
Q psy14906 232 WNLEDRQVENQIK--KAH-RKVVTGAHFLYNEPLLVTSSP-------------DNTLKLWIFDKADGNGRLLRIREGHSA 295 (583)
Q Consensus 232 wd~~~~~~~~~~~--~~~-~~~v~~~~~~~~~~~l~s~~~-------------d~~i~~w~~~~~~~~~~~~~~~~~~~~ 295 (583)
++.+.+....... .+. -...+.+++.++|++.++-.. ...-++|.++.. ++...... .-.
T Consensus 97 ~~~~g~~~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d---g~~~~~~~-~~~ 172 (314)
T d1pjxa_ 97 VQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD---GQMIQVDT-AFQ 172 (314)
T ss_dssp EETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT---SCEEEEEE-EES
T ss_pred EeCCCcEEEEEeccccccccCCCcEEEECCCCCEEEecCccCcccccccceeccCCceEEEEeec---CceeEeeC-Ccc
Confidence 8987654322110 111 113578999999998776421 112245544432 22222222 222
Q ss_pred CCeeEEEeeCCCC-----EEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccc
Q psy14906 296 PPNYIQFYGNSSD-----NILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAR 370 (583)
Q Consensus 296 ~v~~~~~~~~~~~-----~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (583)
..+.++|+| +++ +.++-+..+.|..||+.....+...
T Consensus 173 ~pNGi~~~~-d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~------------------------------------- 214 (314)
T d1pjxa_ 173 FPNGIAVRH-MNDGRPYQLIVAETPTKKLWSYDIKGPAKIENK------------------------------------- 214 (314)
T ss_dssp SEEEEEEEE-CTTSCEEEEEEEETTTTEEEEEEEEETTEEEEE-------------------------------------
T ss_pred eeeeeEECC-CCCcceeEEEEEeecccceEEeeccCcccccee-------------------------------------
Confidence 346888987 443 3444456777888876543211100
Q ss_pred ccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcccccc
Q psy14906 371 EKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSY 450 (583)
Q Consensus 371 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 450 (583)
-...+.. .........+++.++|++.++....+.|.+||...++....+
T Consensus 215 ----------------~~~~~~~---------------~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i 263 (314)
T d1pjxa_ 215 ----------------KVWGHIP---------------GTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRI 263 (314)
T ss_dssp ----------------EEEEECC---------------CCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEE
T ss_pred ----------------eEEEEcc---------------ccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEE
Confidence 0000000 000123567899999998888888899999998888776665
Q ss_pred CCCCCCCcccCeeEEEEeCCCc-EEEEeecCCcEEEEEccCC
Q psy14906 451 GHDNQPGHVGGVRGVVSDNLNQ-IVISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 451 ~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~ 491 (583)
..+....++++|.|+++ ++++.+.+|.|...++...
T Consensus 264 -----~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~ 300 (314)
T d1pjxa_ 264 -----RCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp -----ECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred -----ECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCC
Confidence 34456789999999986 5567777888888887654
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.22 E-value=1e-08 Score=96.82 Aligned_cols=142 Identities=11% Similarity=0.025 Sum_probs=85.7
Q ss_pred eEEEEEcCCeEEEEeccceeeee-ec-----ccCccEEEEccCCCEEEEEeC---------CCcEEEEEcCCCcEEEEee
Q psy14906 84 FHIYTSANNIIYAWRRGIDIVGT-YK-----GHTSPVHLILPFGPHLISVDE---------ESNVKVWDIKAEETYLELS 148 (583)
Q Consensus 84 ~~~~~~~~~~i~vw~~~~~~~~~-~~-----~h~~~v~~is~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~ 148 (583)
.++.-..+|.|.+||......+. +. .....-..+|||+++|+.... .+.+.++|+.++.......
T Consensus 29 ~~~~~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~~l~~ 108 (465)
T d1xfda1 29 EFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDP 108 (465)
T ss_dssp CBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCC
T ss_pred cEEEEeCCCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCceeeccC
Confidence 34444455667777753221111 11 122233356999999887642 4678999999887543222
Q ss_pred ccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEe-ccCCC-----------------eEEE
Q psy14906 149 FDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI-QTWGP-----------------VTAL 210 (583)
Q Consensus 149 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~-~~~~~-----------------v~~~ 210 (583)
.. .....+....|||||+.||... ++.|.+.+..+++.++... +..+. -.++
T Consensus 109 ~~---------~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~ 178 (465)
T d1xfda1 109 PE---------VSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAH 178 (465)
T ss_dssp TT---------CCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEE
T ss_pred cc---------CCccccceeeeccCCceEEEEe-cceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceE
Confidence 11 2345566789999999999875 5689998887776655443 22111 2477
Q ss_pred EEecCCCCEEEEEcCCCcEEEEeCC
Q psy14906 211 SFRTDGPPMMVSGSNTGHLTVWNLE 235 (583)
Q Consensus 211 ~~~~~~~~~l~s~~~dg~i~vwd~~ 235 (583)
.|||||+++++.--.+..+..+.+.
T Consensus 179 ~WSPDgk~iaf~~~D~s~V~~~~~~ 203 (465)
T d1xfda1 179 WWSPDGTRLAYAAINDSRVPIMELP 203 (465)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEC
T ss_pred EECCCCCeEEEEEecccccceeecc
Confidence 8999999444444445556655543
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.18 E-value=2.1e-08 Score=88.02 Aligned_cols=241 Identities=14% Similarity=0.161 Sum_probs=161.0
Q ss_pred ceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEecc------CCCeEEEEEecCCCCEEEE-EcCCCcEEEEeCCC
Q psy14906 164 CVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQT------WGPVTALSFRTDGPPMMVS-GSNTGHLTVWNLED 236 (583)
Q Consensus 164 ~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~l~s-~~~dg~i~vwd~~~ 236 (583)
....++++++++++++-..++.|++||.+ |+.+..+... ......+++.++....+++ .+.++.|..++..
T Consensus 24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~- 101 (279)
T d1q7fa_ 24 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY- 101 (279)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-
T ss_pred CccEEEEcCCCCEEEEECCCCEEEEEeCC-CCEEEEecccCCCcccccccccccccccccccceeccCCcccccccccc-
Confidence 46899999999988887788999999975 7777766421 1234566766664423433 3455678888764
Q ss_pred CeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEe--ccCCCCCeeEEEeeCCCCEEEEee
Q psy14906 237 RQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIR--EGHSAPPNYIQFYGNSSDNILSAA 314 (583)
Q Consensus 237 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~l~~~~ 314 (583)
++....+..........+++.++++++++....+.+.++ +. .+..+..+ ..+......+++.+ ++..+++..
T Consensus 102 g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~--~~---~g~~~~~~g~~~~~~~~~~i~~d~-~g~i~v~d~ 175 (279)
T d1q7fa_ 102 GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIF--DQ---NGNVLHKFGCSKHLEFPNGVVVND-KQEIFISDN 175 (279)
T ss_dssp SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEE--CT---TSCEEEEEECTTTCSSEEEEEECS-SSEEEEEEG
T ss_pred ccceeecCCCcccccceeccccCCcEEEEeeccceeeEe--cc---CCceeecccccccccccceeeecc-ceeEEeeec
Confidence 555555433445667889999999988887777777777 33 34444443 33455667788875 677777777
Q ss_pred CCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCc
Q psy14906 315 GDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYK 394 (583)
Q Consensus 315 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 394 (583)
..+.|++||.... ....+...
T Consensus 176 ~~~~V~~~d~~G~-~~~~~g~~---------------------------------------------------------- 196 (279)
T d1q7fa_ 176 RAHCVKVFNYEGQ-YLRQIGGE---------------------------------------------------------- 196 (279)
T ss_dssp GGTEEEEEETTCC-EEEEESCT----------------------------------------------------------
T ss_pred cccceeeeecCCc-eeeeeccc----------------------------------------------------------
Confidence 7888988886432 21111000
Q ss_pred ccccceeeecccccccCCCCceEEEEccCCcEEEEEec-CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcE
Q psy14906 395 SKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYS-SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQI 473 (583)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 473 (583)
.....+..++++++|+.+++-.. ++.|.+|+. +|+.+..+.. .........+++.|+|.+
T Consensus 197 ---------------g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~-~G~~~~~~~~---~~~~~~p~~vav~~dG~l 257 (279)
T d1q7fa_ 197 ---------------GITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALES---KVKHAQCFDVALMDDGSV 257 (279)
T ss_dssp ---------------TTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEE---SSCCSCEEEEEEETTTEE
T ss_pred ---------------ccccCCcccccccCCeEEEEECCCCcEEEEECC-CCCEEEEEeC---CCCCCCEeEEEEeCCCcE
Confidence 00145678999999997776543 457999984 5766655522 123346789999999986
Q ss_pred EEEeecCCcEEEEEccCC
Q psy14906 474 VISGGNDQTVKVWHFKQT 491 (583)
Q Consensus 474 l~s~~~dg~i~iwd~~~~ 491 (583)
++ ++.+..|++|.....
T Consensus 258 ~V-~~~n~~v~~fr~~~~ 274 (279)
T d1q7fa_ 258 VL-ASKDYRLYIYRYVQL 274 (279)
T ss_dssp EE-EETTTEEEEEECSCC
T ss_pred EE-EeCCCeEEEEEeeee
Confidence 55 457899999998765
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=99.16 E-value=1e-08 Score=91.21 Aligned_cols=232 Identities=15% Similarity=0.100 Sum_probs=147.1
Q ss_pred cceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe--eh
Q psy14906 163 SCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ--VE 240 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~ 240 (583)
..+..++++|||+++++...+++|..|+.. ++ ...+......+.+++|.++|+ ++++...++.+..|+..... ..
T Consensus 28 ~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~-g~-~~~~~~~~~~~~gla~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~ 104 (302)
T d2p4oa1 28 TFLENLASAPDGTIFVTNHEVGEIVSITPD-GN-QQIHATVEGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKSDGTVE 104 (302)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEEECSSEEEEEEECTTSC-EEEEEECTTSCEEEEEECTTSCEE
T ss_pred CCcCCEEECCCCCEEEEeCCCCEEEEEeCC-CC-EEEEEcCCCCcceEEEcCCCC-eEEEecCCceEEEEEeccccccee
Confidence 468899999999999999999999888865 43 334445557899999999999 88888788888888765432 11
Q ss_pred hhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEec--------cCCCCCeeEEEeeCCCCEEEE
Q psy14906 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIRE--------GHSAPPNYIQFYGNSSDNILS 312 (583)
Q Consensus 241 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~l~~ 312 (583)
.............+++.++++++++.+.++.+..+ +...+.......-. ........+.+. .+..+++
T Consensus 105 ~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~--~~~l~~~ 180 (302)
T d2p4oa1 105 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLI--DVVQPSGSIWLEHPMLARSNSESVFPAANGLKRF--GNFLYVS 180 (302)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEE--ETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEE--TTEEEEE
T ss_pred eccccCCccccceeEEccCCCEEeeccccccceee--eccCCcceeEecCCccceeeccCccccccccccc--CCceeee
Confidence 11111234567899999999988887777766555 43322222211110 111223455554 3445556
Q ss_pred eeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEeec
Q psy14906 313 AAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSF 392 (583)
Q Consensus 313 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 392 (583)
.+..+.|..++........... .+
T Consensus 181 ~~~~~~i~~~~~~~~~~~~~~~------------------------------------------------------~~-- 204 (302)
T d2p4oa1 181 NTEKMLLLRIPVDSTDKPGEPE------------------------------------------------------IF-- 204 (302)
T ss_dssp ETTTTEEEEEEBCTTSCBCCCE------------------------------------------------------EE--
T ss_pred cCCCCeEEeccccccccccccc------------------------------------------------------cc--
Confidence 6667777777765432211100 00
Q ss_pred CcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCcc-ccccCCCCCCCcccCeeEEEE---e
Q psy14906 393 YKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAH-RGSYGHDNQPGHVGGVRGVVS---D 468 (583)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~h~~~v~~~~~---s 468 (583)
. .......++++++|++.++...++.|..++...... +... ...-...++++| +
T Consensus 205 ---------------~--~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~-----~~~~~~pt~vafg~~~ 262 (302)
T d2p4oa1 205 ---------------V--EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQA-----EQGVIGSTAVAFGQTE 262 (302)
T ss_dssp ---------------E--ESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECG-----GGTCTTEEEEEECCST
T ss_pred ---------------c--CCCCCcceEECCCCCEEEEEcCCCcEEEECCCCCEEEEEec-----CCCCCCceEEEEcCCC
Confidence 0 003456799999999888888889999997653321 2222 223456889999 6
Q ss_pred CCCcEEEEeec
Q psy14906 469 NLNQIVISGGN 479 (583)
Q Consensus 469 ~~~~~l~s~~~ 479 (583)
+|++.|+.++.
T Consensus 263 ~D~~~Lyvtt~ 273 (302)
T d2p4oa1 263 GDCTAIYVVTN 273 (302)
T ss_dssp TTTTEEEEEEC
T ss_pred CCCCEEEEECC
Confidence 67777765543
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=99.16 E-value=1.6e-08 Score=90.14 Aligned_cols=113 Identities=8% Similarity=0.219 Sum_probs=83.3
Q ss_pred cCeeEEEEeCCCc-----EEEEeecCCcEEEEEccCCCCCceEE---e-ec----cCCeeeEEeccCCcEEEEEeCCceE
Q psy14906 460 GGVRGVVSDNLNQ-----IVISGGNDQTVKVWHFKQTGKPPLRS---I-KL----DNGISFFRTHQESSMLAVCLDDFTV 526 (583)
Q Consensus 460 ~~v~~~~~s~~~~-----~l~s~~~dg~i~iwd~~~~~~~~~~~---~-~~----~~~v~~~~~s~~~~~l~~~~~dg~i 526 (583)
...+.++|+|++. ++++-+..+.|..|++... ..+.. + .. ......+++.++|++.++....+.|
T Consensus 172 ~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~--g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I 249 (314)
T d1pjxa_ 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP--AKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI 249 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEET--TEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEE
T ss_pred ceeeeeEECCCCCcceeEEEEEeecccceEEeeccCc--cccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEE
Confidence 3456899998764 4455567788999988754 22221 1 11 1235678999999988888888999
Q ss_pred EEEEccccceEEeecccccceeeEEecCCCcE-EEEEeCCCeEEEEeCC
Q psy14906 527 NIIDIDTCTIIRKLSGHMGQLTDADFSPDSRW-LITASMDCTIRVWDIP 574 (583)
Q Consensus 527 ~i~d~~~~~~~~~~~~h~~~v~~l~~s~d~~~-l~s~~~d~~i~vw~~~ 574 (583)
.+||.+.++.+..+..+....++++|.||++. .++.+.++.|...++.
T Consensus 250 ~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred EEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence 99999988877777766678899999999975 4666778888887764
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.09 E-value=1.8e-07 Score=83.49 Aligned_cols=238 Identities=11% Similarity=0.108 Sum_probs=141.5
Q ss_pred cCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC--CeEEEEEccCC
Q psy14906 203 TWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD--NTLKLWIFDKA 280 (583)
Q Consensus 203 ~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--~~i~~w~~~~~ 280 (583)
....+..++|.++|+ +.++-...+.|..|+.++++....+ .........+++.++|+++++...+ ....++.++..
T Consensus 38 ~~~~lEG~~~D~~G~-Ly~~D~~~g~I~ri~p~g~~~~~~~-~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~ 115 (319)
T d2dg1a1 38 KGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEIKRPF-VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN 115 (319)
T ss_dssp SCCCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEE-ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred CCcCcEeCEECCCCC-EEEEECCCCEEEEEECCCCeEEEEE-eCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCC
Confidence 334567899999998 8888888899999998876655444 3455678899999999987765432 33445544543
Q ss_pred CCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC------CcEEEEEccccccceeeccchhhhhhhhhhcchhcccc
Q psy14906 281 DGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD------STLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNE 354 (583)
Q Consensus 281 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (583)
.........-..-...+..+.+.+ +|.+.++.... +.+..++...
T Consensus 116 ~~~~~~~~~~~~~~~~~nd~~~d~-~G~l~vtd~~~~~~~~~g~v~~~~~dg---------------------------- 166 (319)
T d2dg1a1 116 GDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDF---------------------------- 166 (319)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTS----------------------------
T ss_pred CceeeeeccCCCcccCCcceeEEe-ccceeecccccccccCcceeEEEeccc----------------------------
Confidence 222222111111122345677765 56544432211 1111111110
Q ss_pred ccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEE-ecC
Q psy14906 355 KFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIG-YSS 433 (583)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~d 433 (583)
+.+.... .. -.....++|+|+++.|+++ +..
T Consensus 167 ------------------------------~~~~~~~-------------~~-----~~~pnGia~s~dg~~lyvad~~~ 198 (319)
T d2dg1a1 167 ------------------------------RTVTPII-------------QN-----ISVANGIALSTDEKVLWVTETTA 198 (319)
T ss_dssp ------------------------------CCEEEEE-------------EE-----ESSEEEEEECTTSSEEEEEEGGG
T ss_pred ------------------------------ceeEEEe-------------ec-----cceeeeeeeccccceEEEecccC
Confidence 0111000 00 0345679999999876554 567
Q ss_pred ceEEEEEcccCcc-ccccCC--CCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccC-------
Q psy14906 434 GHVDRFNIQSGAH-RGSYGH--DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN------- 503 (583)
Q Consensus 434 g~i~i~d~~~~~~-~~~~~~--~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~------- 503 (583)
+.|+.|++..... ...... ............+++.++|++.++....+.|.++|.+ + +.+..+..+.
T Consensus 199 ~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p~-G--~~l~~i~~P~~~~~~~~ 275 (319)
T d2dg1a1 199 NRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-G--YPIGQILIPGRDEGHML 275 (319)
T ss_dssp TEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT-S--CEEEEEECTTGGGTCSC
T ss_pred CceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECCC-C--cEEEEEeCCCcCCCcCc
Confidence 8999999764321 111000 0001122335689999999988888889999999964 5 6777776542
Q ss_pred CeeeEEeccCCcEEEEEeC
Q psy14906 504 GISFFRTHQESSMLAVCLD 522 (583)
Q Consensus 504 ~v~~~~~s~~~~~l~~~~~ 522 (583)
.+++++|.+++..+++...
T Consensus 276 ~~~~~~~~~~~~~~~~t~~ 294 (319)
T d2dg1a1 276 RSTHPQFIPGTNQLIICSN 294 (319)
T ss_dssp BCCEEEECTTSCEEEEEEE
T ss_pred eeeeEEEeCCCCEEEEEcC
Confidence 4789999998877766554
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.02 E-value=2.5e-07 Score=82.51 Aligned_cols=245 Identities=14% Similarity=0.073 Sum_probs=152.0
Q ss_pred CcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcC----CCcEEEEeCCCC
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSN----TGHLTVWNLEDR 237 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~----dg~i~vwd~~~~ 237 (583)
...+..++|.++|++.++-...+.|..|+..+++....+.........++|.+||+ ++++... .+.+...+....
T Consensus 39 ~~~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~-l~va~~~~~~~~~~i~~~~~~~~ 117 (319)
T d2dg1a1 39 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGD 117 (319)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSC
T ss_pred CcCcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCC-EEEEecCCCccceeEEEEcCCCc
Confidence 34557899999999888777889999999887766666655557789999999998 6666533 234555555544
Q ss_pred eehhhhhh-ccccceEEEEEecCCCEEEEEeCC----CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEE-E
Q psy14906 238 QVENQIKK-AHRKVVTGAHFLYNEPLLVTSSPD----NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNI-L 311 (583)
Q Consensus 238 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d----~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~ 311 (583)
........ .-......+++.++|++.++.... ..-.+|.++.. ...+..+...-...+.++|+| +++.| +
T Consensus 118 ~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~d---g~~~~~~~~~~~~pnGia~s~-dg~~lyv 193 (319)
T d2dg1a1 118 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD---FRTVTPIIQNISVANGIALST-DEKVLWV 193 (319)
T ss_dssp SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT---SCCEEEEEEEESSEEEEEECT-TSSEEEE
T ss_pred eeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecc---cceeEEEeeccceeeeeeecc-ccceEEE
Confidence 43322211 113357789999999876664321 12245544543 222222222223457899997 67655 4
Q ss_pred EeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCceEEEee
Q psy14906 312 SAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWS 391 (583)
Q Consensus 312 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 391 (583)
+-+..+.|..|++............ .....
T Consensus 194 ad~~~~~I~~~d~~~~g~~~~~~~~--------------------------------------------------~~~~~ 223 (319)
T d2dg1a1 194 TETTANRLHRIALEDDGVTIQPFGA--------------------------------------------------TIPYY 223 (319)
T ss_dssp EEGGGTEEEEEEECTTSSSEEEEEE--------------------------------------------------EEEEE
T ss_pred ecccCCceEEEEEcCCCceeccccc--------------------------------------------------eeeec
Confidence 4456788998987643211100000 00000
Q ss_pred cCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCCC-CCCcccCeeEEEEeCC
Q psy14906 392 FYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHDN-QPGHVGGVRGVVSDNL 470 (583)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~~h~~~v~~~~~s~~ 470 (583)
. ........++++++|++.++....+.|.+||. .|+.+..+..+. ..++...+++++|.++
T Consensus 224 ~-----------------~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~ 285 (319)
T d2dg1a1 224 F-----------------TGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPG 285 (319)
T ss_dssp C-----------------CSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTT
T ss_pred c-----------------CCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCCcCceeeeEEEeCC
Confidence 0 00023567999999998888888999999995 687777664331 0244557889999998
Q ss_pred CcEEEEeec
Q psy14906 471 NQIVISGGN 479 (583)
Q Consensus 471 ~~~l~s~~~ 479 (583)
+..+++...
T Consensus 286 ~~~~~~t~~ 294 (319)
T d2dg1a1 286 TNQLIICSN 294 (319)
T ss_dssp SCEEEEEEE
T ss_pred CCEEEEEcC
Confidence 776665543
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.69 E-value=2.4e-05 Score=68.28 Aligned_cols=180 Identities=12% Similarity=0.103 Sum_probs=118.0
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC----CeEEEEEccC
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN----KKIILHNILT 193 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----~~i~iw~~~~ 193 (583)
.++|.++++ +.+ .|.++|..+++.......... .....++.+.+.|+|++.++.... +.-.+|.+..
T Consensus 67 ~~dg~l~va-~~~-gl~~~d~~tg~~~~l~~~~~~-------~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~ 137 (295)
T d2ghsa1 67 ISDSKQLIA-SDD-GLFLRDTATGVLTLHAELESD-------LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAK 137 (295)
T ss_dssp EETTEEEEE-ETT-EEEEEETTTCCEEEEECSSTT-------CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEET
T ss_pred ecCCCEEEE-EeC-ccEEeecccceeeEEeeeecC-------CCcccceeeEECCCCCEEEEeccccccccceeEeeecC
Confidence 456655554 433 478888888765433321110 223467889999999877765432 3456777777
Q ss_pred CceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCe--eh------hhhhhccccceEEEEEecCCCEEEE
Q psy14906 194 DESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQ--VE------NQIKKAHRKVVTGAHFLYNEPLLVT 265 (583)
Q Consensus 194 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~------~~~~~~~~~~v~~~~~~~~~~~l~s 265 (583)
++....+... ...+.++|+++++.++++-+..+.|..|++.... .. ... .+.......+++..+|++.++
T Consensus 138 g~~~~~~~~~-~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~-~~~~g~pdG~~vD~~GnlWva 215 (295)
T d2ghsa1 138 GKVTKLFADI-SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDS-TGIKGGMDGSVCDAEGHIWNA 215 (295)
T ss_dssp TEEEEEEEEE-SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEEC-TTSSSEEEEEEECTTSCEEEE
T ss_pred CcEEEEeecc-CCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEecc-CcccccccceEEcCCCCEEee
Confidence 7665555444 5678999999998667777888899999875321 11 111 223456778999999998877
Q ss_pred EeCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEe
Q psy14906 266 SSPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSA 313 (583)
Q Consensus 266 ~~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 313 (583)
.-..+.|..| +. .++.+..+.-....+++++|-.++.+.|+..
T Consensus 216 ~~~~g~V~~~--dp---~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvT 258 (295)
T d2ghsa1 216 RWGEGAVDRY--DT---DGNHIARYEVPGKQTTCPAFIGPDASRLLVT 258 (295)
T ss_dssp EETTTEEEEE--CT---TCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred eeCCCceEEe--cC---CCcEeeEecCCCCceEEEEEeCCCCCEEEEE
Confidence 7677888888 43 4566666655556789999975566666544
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.67 E-value=1.9e-05 Score=68.94 Aligned_cols=214 Identities=9% Similarity=0.016 Sum_probs=137.5
Q ss_pred cEEEEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe--eCeEEEEEcCCeEEEEeccceeeeeec---
Q psy14906 34 VVARFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS--DFFHIYTSANNIIYAWRRGIDIVGTYK--- 108 (583)
Q Consensus 34 ~~~~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~~~~i~vw~~~~~~~~~~~--- 108 (583)
....|.+....++.+=-..+.|.-||.++++..... .+..+.++++ ++.+++++. ..|.++|........+.
T Consensus 21 Egp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~~~~~--~~~~~~~i~~~~dg~l~va~~-~gl~~~d~~tg~~~~l~~~~ 97 (295)
T d2ghsa1 21 EGPTFDPASGTAWWFNILERELHELHLASGRKTVHA--LPFMGSALAKISDSKQLIASD-DGLFLRDTATGVLTLHAELE 97 (295)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE--CSSCEEEEEEEETTEEEEEET-TEEEEEETTTCCEEEEECSS
T ss_pred eCCeEECCCCEEEEEECCCCEEEEEECCCCeEEEEE--CCCCcEEEEEecCCCEEEEEe-CccEEeecccceeeEEeeee
Confidence 445687766665555447889999999998765332 2345677776 677888765 46888997543333332
Q ss_pred cc--CccEEEE--ccCCCEEEEEeC----CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEE
Q psy14906 109 GH--TSPVHLI--LPFGPHLISVDE----ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG 180 (583)
Q Consensus 109 ~h--~~~v~~i--s~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 180 (583)
.. ....+.+ .|+|++.++... .+.-.+|.+..++...... .-..-..++|+++++.+..+
T Consensus 98 ~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~------------~~~~~Ng~~~s~d~~~l~~~ 165 (295)
T d2ghsa1 98 SDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFA------------DISIPNSICFSPDGTTGYFV 165 (295)
T ss_dssp TTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEE------------EESSEEEEEECTTSCEEEEE
T ss_pred cCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEee------------ccCCcceeeecCCCceEEEe
Confidence 11 1234443 889987666432 2345677777765443332 22345789999999876544
Q ss_pred -ecCCeEEEEEccCC------cee--EEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccce
Q psy14906 181 -LSNKKIILHNILTD------ESL--MEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVV 251 (583)
Q Consensus 181 -~~d~~i~iw~~~~~------~~~--~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v 251 (583)
+..+.|..+++... +.. ..+.+..+....+++..+|. +.++.-..+.|..||. +++.+..+ .--...+
T Consensus 166 dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~Gn-lWva~~~~g~V~~~dp-~G~~~~~i-~lP~~~~ 242 (295)
T d2ghsa1 166 DTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDT-DGNHIARY-EVPGKQT 242 (295)
T ss_dssp ETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECT-TCCEEEEE-ECSCSBE
T ss_pred ecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCC-EEeeeeCCCceEEecC-CCcEeeEe-cCCCCce
Confidence 55778888887421 111 12223445688999999998 6666556788999996 57777777 3334578
Q ss_pred EEEEEe-cCCCEEEE
Q psy14906 252 TGAHFL-YNEPLLVT 265 (583)
Q Consensus 252 ~~~~~~-~~~~~l~s 265 (583)
++++|- +|.+.|+.
T Consensus 243 T~~~FGG~d~~~Lyv 257 (295)
T d2ghsa1 243 TCPAFIGPDASRLLV 257 (295)
T ss_dssp EEEEEESTTSCEEEE
T ss_pred EEEEEeCCCCCEEEE
Confidence 999996 56555443
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.64 E-value=3.5e-06 Score=73.63 Aligned_cols=153 Identities=7% Similarity=0.010 Sum_probs=80.7
Q ss_pred CceEEEEccCCcEEEEEecC------ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCC------
Q psy14906 414 KPTCVYITHCGNFVLIGYSS------GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ------ 481 (583)
Q Consensus 414 ~i~~~~~s~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg------ 481 (583)
......|+|+|+.++..... ..+...+...+..... +........+.+.+..++....+.
T Consensus 96 ~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (281)
T d1k32a2 96 FTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL--------NLGPATHILFADGRRVIGRNTFELPHWKGY 167 (281)
T ss_dssp CSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC--------CSCSCSEEEEETTEEEEEESCSCCTTSTTC
T ss_pred cccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEe--------cCCccceeeecCCCeEEEeeccccceeeee
Confidence 35678899999998875432 2355555555443322 222333444444444444433221
Q ss_pred -----cEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeC--CceEEEEEccccceEEeecccccceeeEEecC
Q psy14906 482 -----TVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLD--DFTVNIIDIDTCTIIRKLSGHMGQLTDADFSP 554 (583)
Q Consensus 482 -----~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~ 554 (583)
.......... ................++++. .+..... ...|+++|+++++... +..+. ......|+|
T Consensus 168 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~d~~g~~~~~-lt~~~-~~~~~~~Sp 242 (281)
T d1k32a2 168 RGGTRGKIWIEVNSG--AFKKIVDMSTHVSSPVIVGHR-IYFITDIDGFGQIYSTDLDGKDLRK-HTSFT-DYYPRHLNT 242 (281)
T ss_dssp CSTTCCEEEEEEETT--EEEEEECCSSCCEEEEEETTE-EEEEECTTSSCEEEEEETTSCSCEE-CCCCC-SSCEEEEEE
T ss_pred ccCCcceeeeecccc--ceeeccCCccccceeeeeccc-cceecccccccceEEEeCCCCceEE-eecCC-CcccccCcC
Confidence 1112222221 222222333344445555543 2222322 3468888887766443 33222 223346999
Q ss_pred CCcEEEEEeCCCeEEEEeCCCccccc
Q psy14906 555 DSRWLITASMDCTIRVWDIPSSQLID 580 (583)
Q Consensus 555 d~~~l~s~~~d~~i~vw~~~~~~~~~ 580 (583)
||+.|+.. .++.|+++|+.+++..+
T Consensus 243 DG~~I~f~-~~~~l~~~d~~~g~~~~ 267 (281)
T d1k32a2 243 DGRRILFS-KGGSIYIFNPDTEKIEK 267 (281)
T ss_dssp SSSCEEEE-ETTEEEEECTTTCCEEE
T ss_pred CCCEEEEE-eCCEEEEEECCCCCEEE
Confidence 99998864 46889999999887643
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=98.57 E-value=0.00038 Score=66.92 Aligned_cols=389 Identities=8% Similarity=-0.053 Sum_probs=189.8
Q ss_pred CCCEEEEEeCCCcEEEEEc-CCCcEEEEeeccCCceEEecccCCcceEEEeeCCC----CCEEEEEecCCeEEEEEccCC
Q psy14906 120 FGPHLISVDEESNVKVWDI-KAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPV----VDIIGVGLSNKKIILHNILTD 194 (583)
Q Consensus 120 ~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~----~~~l~~~~~d~~i~iw~~~~~ 194 (583)
+|...++.+.++.+...|. ++|+.+.++.................-+.+++.++ ..+++.++.|+.+.-.|.++|
T Consensus 62 ~g~ly~~t~~~~~v~a~d~~~tG~~~W~~~~~~~~~~~~~~~~~~~~RGv~~~~~~~~~~~~v~~~t~dg~l~Alda~tG 141 (596)
T d1w6sa_ 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (596)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEeeCCCCcEEEEeCCCCCCEEEEecCCCCcccccccccccccceeEEecCCCCCceEEEEEeCCCCeEeeccccC
Confidence 4443344444567777776 57888877653321100000000001123444332 347888999999999999999
Q ss_pred ceeEEEeccC----CCeEEEEEecCCCCEEEEEcC------CCcEEEEeCCCCeehhhhhhc------------------
Q psy14906 195 ESLMEFIQTW----GPVTALSFRTDGPPMMVSGSN------TGHLTVWNLEDRQVENQIKKA------------------ 246 (583)
Q Consensus 195 ~~~~~~~~~~----~~v~~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~------------------ 246 (583)
+.+..+.... ..++.--.--++ .++.+.. .|.|+-+|+.+|+++-++...
T Consensus 142 ~~~w~~~~~d~~~~~~~t~~P~v~~~--~vivg~~~~e~~~~G~v~A~Da~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~ 219 (596)
T d1w6sa_ 142 ETVWKVENSDIKVGSTLTIAPYVVKD--KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (596)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEETT--EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred ceeccccccccccccccccCCcEECC--eEEEeeccccccccCceEEEECCCCcEEEEeeccCCcccccccccccccccc
Confidence 9998875321 111111111133 4555543 488999999999877543100
Q ss_pred -------------------cccceEEEEEecCCCEEEEEeCC----------------CeEEEEEccCCCCCceeeEEec
Q psy14906 247 -------------------HRKVVTGAHFLYNEPLLVTSSPD----------------NTLKLWIFDKADGNGRLLRIRE 291 (583)
Q Consensus 247 -------------------~~~~v~~~~~~~~~~~l~s~~~d----------------~~i~~w~~~~~~~~~~~~~~~~ 291 (583)
-...-..+++.+...++..+..+ ..+.-. |..+++..-.....
T Consensus 220 ~g~~~~~~~tw~g~~~~~gg~~~W~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~sivAl--D~~TG~~~W~~Q~~ 297 (596)
T d1w6sa_ 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGR--DADTGEAKFGYQKT 297 (596)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEE--ETTTCCEEEEEESS
T ss_pred ccccccccccCCCCceecCCCccccccccccCCCeeeccccccccccccccccccccccccccc--ccccccccccccce
Confidence 00011234556666666555332 223333 44433333222222
Q ss_pred cCCC-------CCeeEEEeeCCC---CEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCcc
Q psy14906 292 GHSA-------PPNYIQFYGNSS---DNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPV 361 (583)
Q Consensus 292 ~~~~-------~v~~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (583)
.|.. .+.-+.....++ ..++....+|.+.++|..+++.+............. ..+.....+
T Consensus 298 ~~D~Wd~d~~~~~~l~d~~~~~G~~~~~v~~~~k~G~~~vlDr~tG~~i~~~~~~~~~~~~~--------~~d~~~~~p- 368 (596)
T d1w6sa_ 298 PHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFK--------SVDLKTGQP- 368 (596)
T ss_dssp TTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE--------EECTTTCCE-
T ss_pred eccccCCccccceeeeeccccccccccceeccccccceeeecCCCCceeeeccccccccccc--------ccccccccc-
Confidence 3321 111111111233 367778889999999999998764321110000000 000000000
Q ss_pred ceeeeecccccccccEEEEecCCceEEEeecCccc--ccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEE
Q psy14906 362 SQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSK--MDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRF 439 (583)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~ 439 (583)
+++..... .............. ..-...+++|+..++++...+.... |
T Consensus 369 ---------------------------~~~~~~~~~~~~~~~~i~pg~~Gg--~nw~~~a~dp~~~l~yvp~~~~~~~-~ 418 (596)
T d1w6sa_ 369 ---------------------------VRDPEYGTRMDHLAKDICPSAMGY--HNQGHDSYDPKRELFFMGINHICMD-W 418 (596)
T ss_dssp ---------------------------EECGGGCCCTTCCEEEESSCTTCS--SCSCBCEEETTTTEEEEEEECEEEE-E
T ss_pred ---------------------------ccCccccccCCccceeEecccccc--cccCccccCCCCceEEecccccccc-c
Confidence 00000000 00000000000000 2234568888888888876654332 2
Q ss_pred EcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEE
Q psy14906 440 NIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAV 519 (583)
Q Consensus 440 d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 519 (583)
.........- ....+.-......|.+.... --.-|.|.-||+.++ +.+.......+...-.++..|.++++
T Consensus 419 ~~~~~~~~~g------~~~~g~~~~~~~~~~g~~~~-~~~~G~l~A~D~~TG--~~~W~~~~~~~~~gg~lsTagglVF~ 489 (596)
T d1w6sa_ 419 EPFMLPYKAG------QFFVGATLNMYPGPKGDRQN-YEGLGQIKAYNAITG--DYKWEKMERFAVWGGTMATAGDLVFY 489 (596)
T ss_dssp EECCCCCCTT------SCCCCEEEEEEECTTSBTTT-TBCCEEEEEECTTTC--CEEEEEEESSCCCSBCEEETTTEEEE
T ss_pred cccccccccc------ccccccccccccCcccCccc-CCCcceEEEEeCCCC--ceecccCCCCCCccceeEecCCEEEE
Confidence 2111000000 00111111222233321100 011267889999988 77777766666555555667888889
Q ss_pred EeCCceEEEEEccccceEEeecccccc-eeeEEecCCCc-EEE
Q psy14906 520 CLDDFTVNIIDIDTCTIIRKLSGHMGQ-LTDADFSPDSR-WLI 560 (583)
Q Consensus 520 ~~~dg~i~i~d~~~~~~~~~~~~h~~~-v~~l~~s~d~~-~l~ 560 (583)
|+.||.++.+|.++|+.+.+++..... -.-+.|..||+ |++
T Consensus 490 G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGkQYva 532 (596)
T d1w6sa_ 490 GTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVA 532 (596)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred ECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCEEEEE
Confidence 999999999999999999887633221 11244556775 454
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.56 E-value=1.8e-05 Score=68.88 Aligned_cols=236 Identities=11% Similarity=0.016 Sum_probs=128.3
Q ss_pred EEEee--CeEEEEEcCCeEEEEeccceeeeeecccCccEEE--EccCCCEEEEEeC-C-----CcEEEEEcCCCcEEEEe
Q psy14906 78 CLSSD--FFHIYTSANNIIYAWRRGIDIVGTYKGHTSPVHL--ILPFGPHLISVDE-E-----SNVKVWDIKAEETYLEL 147 (583)
Q Consensus 78 ~~~~~--~~~~~~~~~~~i~vw~~~~~~~~~~~~h~~~v~~--is~~~~~l~s~~~-d-----g~i~iwd~~~~~~~~~~ 147 (583)
.+++| |+.++-..++.|.+.|+.+...+.|..+.+.+.. +||||++||.... + ..|.+.+..+++.....
T Consensus 5 ~~sPdi~G~~v~f~~~~dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt 84 (281)
T d1k32a2 5 LLNPDIHGDRIIFVCCDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRIT 84 (281)
T ss_dssp CEEEEEETTEEEEEETTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECC
T ss_pred ccCCCCCCCEEEEEeCCcEEEEECCCCCEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEee
Confidence 35677 8777777788899999877666777777777665 4999999996532 2 24777888777654322
Q ss_pred eccCCceEEecccCCcceEEEeeCCCCCEEEEEecC------CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEE
Q psy14906 148 SFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN------KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMV 221 (583)
Q Consensus 148 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 221 (583)
. ...... .........+|+|||+.|+..... ..+...+...++.... +...... .+.+++...++
T Consensus 85 ~-~~~~~~----~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~ 155 (281)
T d1k32a2 85 Y-FSGKST----GRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPL---NLGPATH-ILFADGRRVIG 155 (281)
T ss_dssp C-CCEEEE----TTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEEC---CSCSCSE-EEEETTEEEEE
T ss_pred e-cCCCcc----CccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEe---cCCccce-eeecCCCeEEE
Confidence 1 100000 223456778999999999876432 2355556554443222 2123333 34445442444
Q ss_pred EEcCCC-----------cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEe
Q psy14906 222 SGSNTG-----------HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIR 290 (583)
Q Consensus 222 s~~~dg-----------~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~ 290 (583)
....+. ................ ..........++++. .+.....++.-.||-++......+ .+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~d~~g~~~~---~l 229 (281)
T d1k32a2 156 RNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIV--DMSTHVSSPVIVGHR-IYFITDIDGFGQIYSTDLDGKDLR---KH 229 (281)
T ss_dssp ESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEE--CCSSCCEEEEEETTE-EEEEECTTSSCEEEEEETTSCSCE---EC
T ss_pred eeccccceeeeeccCCcceeeeeccccceeecc--CCccccceeeeeccc-cceecccccccceEEEeCCCCceE---Ee
Confidence 433221 1112222222222111 222334445555543 333344455555555555433333 23
Q ss_pred ccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEccccccce
Q psy14906 291 EGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNTKSETSNK 331 (583)
Q Consensus 291 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 331 (583)
..+. ......|+| ||+.|+... ++.|+++|+.+++..+
T Consensus 230 t~~~-~~~~~~~Sp-DG~~I~f~~-~~~l~~~d~~~g~~~~ 267 (281)
T d1k32a2 230 TSFT-DYYPRHLNT-DGRRILFSK-GGSIYIFNPDTEKIEK 267 (281)
T ss_dssp CCCC-SSCEEEEEE-SSSCEEEEE-TTEEEEECTTTCCEEE
T ss_pred ecCC-CcccccCcC-CCCEEEEEe-CCEEEEEECCCCCEEE
Confidence 2222 223346887 788877643 5789999998876543
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=98.52 E-value=0.00016 Score=69.51 Aligned_cols=405 Identities=10% Similarity=-0.012 Sum_probs=201.9
Q ss_pred CEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEe
Q psy14906 122 PHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFI 201 (583)
Q Consensus 122 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~ 201 (583)
..|+.++.++.|.-+|.++|+.+.++.................-..+++. ...+..++.++.+.-.|.++|+.+....
T Consensus 78 g~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~v~~~t~~g~l~alda~tG~~~W~~~ 155 (573)
T d1kb0a2 78 GIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW--KGKVYVGAWDGRLIALDAATGKEVWHQN 155 (573)
T ss_dssp TEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEE--CCcEEEEecccceeeeccccccceeccc
Confidence 35666677889999999999999887532111000000000000112222 3466778889999999999999987765
Q ss_pred ccC---CCe--EEEEEecCCCCEEEEEcC------CCcEEEEeCCCCeehhhhhhc------------------------
Q psy14906 202 QTW---GPV--TALSFRTDGPPMMVSGSN------TGHLTVWNLEDRQVENQIKKA------------------------ 246 (583)
Q Consensus 202 ~~~---~~v--~~~~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~------------------------ 246 (583)
... ..+ +..-.--++ .++.++. .|.|+-+|.++|+++..+...
T Consensus 156 ~~~~~~~~~~~~~~p~v~~~--~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~t~~~~~ 233 (573)
T d1kb0a2 156 TFEGQKGSLTITGAPRVFKG--KVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSG 233 (573)
T ss_dssp TTTTCCSSCBCCSCCEEETT--EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGG
T ss_pred CccCCcceEEeecceEEEec--cEEEeeccccccccceEEEEecCCccceeeeeeccccCCCCCCcccccccccccCCCC
Confidence 321 111 111111133 3555432 467999999999876543110
Q ss_pred ------cccce-EEEEEecCCCEEEEEeCC-----------------CeEEEEEccCCCCCceeeEEeccCC-------C
Q psy14906 247 ------HRKVV-TGAHFLYNEPLLVTSSPD-----------------NTLKLWIFDKADGNGRLLRIREGHS-------A 295 (583)
Q Consensus 247 ------~~~~v-~~~~~~~~~~~l~s~~~d-----------------~~i~~w~~~~~~~~~~~~~~~~~~~-------~ 295 (583)
....+ ...++.++..+++..... ..-.++-++..+++.+.......|. .
T Consensus 234 ~~~~~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svvAld~~tG~~~W~~q~~~~d~wd~d~~~ 313 (573)
T d1kb0a2 234 KWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQ 313 (573)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred ceeecCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEEEecccchheeecccccCcccccccccc
Confidence 00111 124555655555443211 1113444455443333322222221 1
Q ss_pred CCeeEEEeeCCC---CEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeeccccc
Q psy14906 296 PPNYIQFYGNSS---DNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREK 372 (583)
Q Consensus 296 ~v~~~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (583)
+........ ++ ..++.++.+|.+.++|..+++.+.......... ...+
T Consensus 314 ~~~l~~~~~-~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~~~~~~~~--------------------~~~~-------- 364 (573)
T d1kb0a2 314 PMILADIKI-AGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNW--------------------ASGY-------- 364 (573)
T ss_dssp CCEEEEEEE-TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSS--------------------EEEE--------
T ss_pred eeeecceec-CCCceeeeeeccccceeEEecccccccccccccccccc--------------------cccc--------
Confidence 111112221 23 457788889999999999998765432111000 0000
Q ss_pred ccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCC
Q psy14906 373 DWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGH 452 (583)
Q Consensus 373 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 452 (583)
. ..+. .+..................... ..-..++++|+...+++...+....+......+.......
T Consensus 365 --------~-~~~~-~~~~~~~~~~~~~~~~~pg~~Gg--~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~ 432 (573)
T d1kb0a2 365 --------D-KHGK-PIGIAAARDGSKPQDAVPGPYGA--HNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPG 432 (573)
T ss_dssp --------C-TTSC-EEECGGGGCTTSCEECSSCTTCS--SCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTT
T ss_pred --------c-cccc-eeeeeeccccccceEEeecccCC--ccccccccCCCcceEEeeccccceeeecccccccccCCCC
Confidence 0 0000 00000000000000000000000 1233568899988888888777666665544332221110
Q ss_pred CCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEcc
Q psy14906 453 DNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDID 532 (583)
Q Consensus 453 ~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 532 (583)
. ...........+. .+. -.....-|.+.-||+.++ +.+...+...+...=..+-.|.++++|+.||.++.+|.+
T Consensus 433 ~--~~~g~~~~~~~~~-~~~-p~~~~~~G~l~AiD~~tG--k~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~ 506 (573)
T d1kb0a2 433 K--PQSGTGWNTAKFF-NAE-PPKSKPFGRLLAWDPVAQ--KAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAA 506 (573)
T ss_dssp S--TTGGGTCCCCEEE-CSS-CCCSCCEEEEEEEETTTT--EEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred c--ccccccccccccc-ccC-CCCCCCcccEEEeCCCCC--ceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECC
Confidence 0 0000001111110 000 000011257888888888 777777766554444455578899999999999999999
Q ss_pred ccceEEeeccccccee-eEEecCCCc-EEEEEeC----------------CCeEEEEeCCCcc
Q psy14906 533 TCTIIRKLSGHMGQLT-DADFSPDSR-WLITASM----------------DCTIRVWDIPSSQ 577 (583)
Q Consensus 533 ~~~~~~~~~~h~~~v~-~l~~s~d~~-~l~s~~~----------------d~~i~vw~~~~~~ 577 (583)
+|+.+.+++......- -+.|..||+ |++..+. .+.|.+|.+....
T Consensus 507 TGe~LW~~~~~~~~~~~P~ty~~~GkQYv~v~~G~gg~~~~~~~~~~~~~~~~~~~F~l~g~~ 569 (573)
T d1kb0a2 507 TGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGGKA 569 (573)
T ss_dssp TCCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETCBC
T ss_pred CCcEeEEEECCCCccccCEEEEECCEEEEEEEeCCCcccccccccccCCCCCEEEEEEeCCcC
Confidence 9999988764322111 145666886 4443221 2368888876543
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=98.46 E-value=7.2e-05 Score=71.68 Aligned_cols=82 Identities=11% Similarity=0.095 Sum_probs=57.1
Q ss_pred CceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeee--EEe
Q psy14906 433 SGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISF--FRT 510 (583)
Q Consensus 433 dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~--~~~ 510 (583)
.|.|.-+|+.+++....... .....+-.++-.+.+++.++.||.++.+|.+++ +.+..++....+.. +.+
T Consensus 437 ~G~l~A~D~~tGk~~W~~~~------~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tG--e~LW~~~l~~~~~~~P~ty 508 (560)
T d1kv9a2 437 SGALLAWDPVKQKAAWKVPY------PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKG--EALWQFEAQSGIVAAPMTF 508 (560)
T ss_dssp EEEEEEEETTTTEEEEEEEE------SSSCCCCEEEETTTEEEEECTTSEEEEEETTTC--CEEEEEECSSCCCSCCEEE
T ss_pred ccceEEEeCCCCeEeeeccC------CCCCCCceeEECCCEEEEECCCCcEEEEECCCC--cEeEEEECCCCccccCEEE
Confidence 36788889999888776532 112222223335667888999999999999999 99998887765443 566
Q ss_pred ccCCc-EEEEEeC
Q psy14906 511 HQESS-MLAVCLD 522 (583)
Q Consensus 511 s~~~~-~l~~~~~ 522 (583)
..+|+ ||++...
T Consensus 509 ~~dGkqyv~v~aG 521 (560)
T d1kv9a2 509 ELAGRQYVAIMAG 521 (560)
T ss_dssp EETTEEEEEEEEC
T ss_pred EECCEEEEEEEeC
Confidence 67886 6665443
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=98.45 E-value=0.00014 Score=69.73 Aligned_cols=385 Identities=8% Similarity=-0.071 Sum_probs=188.3
Q ss_pred CCCEEEEEeCCCcEEEEEc-CCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeE
Q psy14906 120 FGPHLISVDEESNVKVWDI-KAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLM 198 (583)
Q Consensus 120 ~~~~l~s~~~dg~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~ 198 (583)
+|...++.+.++.|.-.|. ++|+.+.++.................-+.+++. +..|+.++.++.+.-.|.++|+.+.
T Consensus 62 ~g~vyv~t~~~~~v~Alda~~tG~~~W~~~~~~~~~~~~~~~~~~~~rg~a~~--~~~i~~~~~~g~l~alda~tG~~~w 139 (571)
T d2ad6a1 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--AGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEecCCCCeEEEEeCCCCCceEEEecCCCCcccccccccCcCCCcceee--CCeEEEEeCCCcEEeeehhhhhhhc
Confidence 3433333334678888887 468888877532111000000000000122332 4567788899999999999999987
Q ss_pred EEeccC----CCeEEEEEecCCCCEEEEEc------CCCcEEEEeCCCCeehhhhhhc----------------------
Q psy14906 199 EFIQTW----GPVTALSFRTDGPPMMVSGS------NTGHLTVWNLEDRQVENQIKKA---------------------- 246 (583)
Q Consensus 199 ~~~~~~----~~v~~~~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~---------------------- 246 (583)
...... ..++.--.-.++ .++.+. ..|.|+-+|+.+|+.+..+...
T Consensus 140 ~~~~~~~~~~~~~t~~p~v~~~--~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~ 217 (571)
T d2ad6a1 140 EVEVCDPKVGSTLTQAPFVAKD--TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEETT--EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred cccccccccccceeecCeEeCC--eEEEeeccccccccCcEEEEECCCCcEEEEEeccCCcccccccccccccccccCcc
Confidence 765221 122211122234 345544 3678999999999876543100
Q ss_pred --------------cccce-EEEEEecCCCEEEEEeCCC--------------eEEEEEccCCCCCceeeEEeccCCC--
Q psy14906 247 --------------HRKVV-TGAHFLYNEPLLVTSSPDN--------------TLKLWIFDKADGNGRLLRIREGHSA-- 295 (583)
Q Consensus 247 --------------~~~~v-~~~~~~~~~~~l~s~~~d~--------------~i~~w~~~~~~~~~~~~~~~~~~~~-- 295 (583)
....+ ...++.++..+++.+..+. .-.++-++..+ ++..-.++....
T Consensus 218 ~~~~~~~~~~~~~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~svvAld~~T--G~~~W~~q~~~~D~ 295 (571)
T d2ad6a1 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDT--GMAKWGYQKTPHDE 295 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTT--CCEEEEEESSTTCS
T ss_pred cccccccCCcccccCCCccccccccchhcCeeeeecccccCccccccccccccccceeeeeccc--hhheecccccCccc
Confidence 00111 2345666666655544321 11233334443 333333332211
Q ss_pred -------CCeeEEEeeCCCC---EEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceee
Q psy14906 296 -------PPNYIQFYGNSSD---NILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFS 365 (583)
Q Consensus 296 -------~v~~~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (583)
+........ +++ .++..+.+|.+.++|..+++.+............ .........
T Consensus 296 Wd~D~~~~~~l~~~~~-~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~~~~~~~~~~~-----------~~~~~~~~~--- 360 (571)
T d2ad6a1 296 WDFAGVNQMVLTDQPV-NGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF-----------KKVDLKTGT--- 360 (571)
T ss_dssp SCCCCCCCCEEEEEEE-TTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE-----------EEECTTTCS---
T ss_pred cccccccccceeeeec-cCccccceeeccccceEEEEecCCCcEeeeeccCCccccc-----------ccccccccc---
Confidence 111112221 343 4677888999999999999876432111000000 000000000
Q ss_pred eecccccccccEEEEecCCceEEEeecC--cccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEccc
Q psy14906 366 FGLAREKDWNNIAAIHTGKNKVSLWSFY--KSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQS 443 (583)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 443 (583)
.+.... ................. ..-...+++|+...+++...+..........
T Consensus 361 ----------------------~i~~~~~~~~~~~~g~~~~p~~~Gg--~~w~~~a~dP~~~~~yv~~~~~~~~~~~~~~ 416 (571)
T d2ad6a1 361 ----------------------PVRDPEFATRMDHKGTNICPSAMGF--HNQGVDSYDPESRTLYAGLNHICMDWEPFML 416 (571)
T ss_dssp ----------------------EEECGGGCCCTTCCEEEESSCTTCS--SCSCBCEEETTTTEEEEEEECEEEEEEECCC
T ss_pred ----------------------cccCcccccccccCceEEEeccccc--cccccceECCCCceEEEeccccccccccccc
Confidence 000000 00000000000000111 1123467889988888887765443332211
Q ss_pred CccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCC
Q psy14906 444 GAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDD 523 (583)
Q Consensus 444 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 523 (583)
... .+-......+...+... .......|.|.-+|+.++ +.+.......+..+-.++-.+.++++|+.|
T Consensus 417 ~~~---------~~~~~~~~~~~~~~~~~-~~~~~~~G~l~AiD~~TG--~~~W~~~~~~~~~~g~l~TagglVf~G~~d 484 (571)
T d2ad6a1 417 PYR---------AGQFFVGATLAMYPGPN-GPTKKEMGQIRAFDLTTG--KAKWTKWEKFAAWGGTLYTKGGLVWYATLD 484 (571)
T ss_dssp CCC---------TTSCCCCEEEEEEECTT-STTSCCCEEEEEECTTTC--CEEEEEEESSCCCSBCEEETTTEEEEECTT
T ss_pred ccc---------CCccccccceeeccccC-CcccCCcccEEEeccCCC--ceeeEcCCCCCCCcceeEecCCEEEEECCC
Confidence 110 01111111122221111 011223468999999998 888777666554443444457788889999
Q ss_pred ceEEEEEccccceEEeecccccc-eeeEEecCCCc-EEEE
Q psy14906 524 FTVNIIDIDTCTIIRKLSGHMGQ-LTDADFSPDSR-WLIT 561 (583)
Q Consensus 524 g~i~i~d~~~~~~~~~~~~h~~~-v~~l~~s~d~~-~l~s 561 (583)
|.++-+|.++|+.+.+++-.... -.-+.|..||+ |++.
T Consensus 485 g~l~A~Da~tGe~lW~~~l~~~~~a~P~ty~~dGkqYi~v 524 (571)
T d2ad6a1 485 GYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGS 524 (571)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CeEEEEECCCCcEEEEEECCCCceecceEEEECCEEEEEE
Confidence 99999999999999877632211 12256666886 5544
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=98.39 E-value=0.00032 Score=67.15 Aligned_cols=191 Identities=13% Similarity=0.036 Sum_probs=110.9
Q ss_pred eCCeEEEEec-CCcEEEeecCCC-CC---Ce-------EEEEe-eCeEEEEEcCCeEEEEec-cceeeeeecc---cC-c
Q psy14906 51 VGKAFHVYGC-NHFKLLSVSPQH-ED---DI-------TCLSS-DFFHIYTSANNIIYAWRR-GIDIVGTYKG---HT-S 112 (583)
Q Consensus 51 ~~~~i~v~d~-~~~~~~~~~~~h-~~---~v-------~~~~~-~~~~~~~~~~~~i~vw~~-~~~~~~~~~~---h~-~ 112 (583)
.++.|...|. ++|+++-.+... .. .. ..+++ +++++.++.++.+.--|. +++.+-...- +. .
T Consensus 71 ~~~~v~Alda~~tG~~~W~~~~~~~~~~~~~~~~~~~~rg~a~~~~~i~~~~~~g~l~alda~tG~~~w~~~~~~~~~~~ 150 (571)
T d2ad6a1 71 FPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGS 150 (571)
T ss_dssp TTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTC
T ss_pred CCCeEEEEeCCCCCceEEEecCCCCcccccccccCcCCCcceeeCCeEEEEeCCCcEEeeehhhhhhhcccccccccccc
Confidence 3678888887 469888665311 10 01 12344 568888888898887785 4554433321 11 1
Q ss_pred cEEE--EccCCCEEEEEe------CCCcEEEEEcCCCcEEEEeeccCCceEEe-----------------c---------
Q psy14906 113 PVHL--ILPFGPHLISVD------EESNVKVWDIKAEETYLELSFDNDTFKIM-----------------G--------- 158 (583)
Q Consensus 113 ~v~~--is~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-----------------~--------- 158 (583)
.++. +..+ ..++.+. ..|.|+-+|+.+|+.+.+....+...... +
T Consensus 151 ~~t~~p~v~~-~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (571)
T d2ad6a1 151 TLTQAPFVAK-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAW 229 (571)
T ss_dssp BCCSCCEEET-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGG
T ss_pred ceeecCeEeC-CeEEEeeccccccccCcEEEEECCCCcEEEEEeccCCcccccccccccccccccCcccccccccCCccc
Confidence 1111 1223 3444443 26789999999999998876432211000 0
Q ss_pred ccCCcce-EEEeeCCCCCEEEEEec----------------CCeEEEEEccCCceeEEEeccCCCe---------EEEEE
Q psy14906 159 KRWNSCV-NVLEPSPVVDIIGVGLS----------------NKKIILHNILTDESLMEFIQTWGPV---------TALSF 212 (583)
Q Consensus 159 ~~~~~~i-~~~~~s~~~~~l~~~~~----------------d~~i~iw~~~~~~~~~~~~~~~~~v---------~~~~~ 212 (583)
......+ ...++.++..++..+.. ...+.-.|.++|+.+..++.....+ .....
T Consensus 230 ~~~gg~vW~~~s~D~~~g~~y~~tg~~~p~~~~~r~g~n~~s~svvAld~~TG~~~W~~q~~~~D~Wd~D~~~~~~l~~~ 309 (571)
T d2ad6a1 230 KIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQ 309 (571)
T ss_dssp GGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEE
T ss_pred ccCCCccccccccchhcCeeeeecccccCccccccccccccccceeeeeccchhheecccccCccccccccccccceeee
Confidence 0001112 23455667766665543 3467888999999998887432222 22223
Q ss_pred ecCCC--CEEEEEcCCCcEEEEeCCCCeehhh
Q psy14906 213 RTDGP--PMMVSGSNTGHLTVWNLEDRQVENQ 242 (583)
Q Consensus 213 ~~~~~--~~l~s~~~dg~i~vwd~~~~~~~~~ 242 (583)
..+++ ..++.++.+|.+.++|.++++++..
T Consensus 310 ~~~g~~~~~v~~~~k~G~l~vlDr~tG~~i~~ 341 (571)
T d2ad6a1 310 PVNGKMTPLLSHIDRNGILYTLNRENGNLIVA 341 (571)
T ss_dssp EETTEEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred eccCccccceeeccccceEEEEecCCCcEeee
Confidence 33443 2567888999999999999987743
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=98.31 E-value=0.00044 Score=66.09 Aligned_cols=96 Identities=6% Similarity=0.074 Sum_probs=65.7
Q ss_pred CcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccce-eeEEecCCCc-E
Q psy14906 481 QTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQL-TDADFSPDSR-W 558 (583)
Q Consensus 481 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~v-~~l~~s~d~~-~ 558 (583)
|.+.-||+.++ +.+.......+...-.++-.+.++++|+.||.++.+|.++|+.+.+++...... .-+.|..||+ |
T Consensus 438 G~l~A~D~~tG--k~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqy 515 (560)
T d1kv9a2 438 GALLAWDPVKQ--KAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQY 515 (560)
T ss_dssp EEEEEEETTTT--EEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cceEEEeCCCC--eEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEE
Confidence 46778888888 777777766655544455567788899999999999999999998876432211 1245667885 5
Q ss_pred EEEEeC--------------------CCeEEEEeCCCccc
Q psy14906 559 LITASM--------------------DCTIRVWDIPSSQL 578 (583)
Q Consensus 559 l~s~~~--------------------d~~i~vw~~~~~~~ 578 (583)
|+..+. .+.|.+|.+.....
T Consensus 516 v~v~aG~g~~~~~~~~~~~~~~~~~~g~~l~~F~L~g~~~ 555 (560)
T d1kv9a2 516 VAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDGKAQ 555 (560)
T ss_dssp EEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETCCCC
T ss_pred EEEEeCCCcccccccccccccccCCCCCEEEEEEeCCCCC
Confidence 554332 23688888865443
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.25 E-value=0.00094 Score=56.53 Aligned_cols=162 Identities=15% Similarity=0.060 Sum_probs=101.5
Q ss_pred CcceEEEeeCCCCCEEEEEe-cCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeeh
Q psy14906 162 NSCVNVLEPSPVVDIIGVGL-SNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVE 240 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~-~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 240 (583)
...+..++|.+..+.|.... .++.|...++........+......+..+++..-+..+..+-...+.|.+.++......
T Consensus 35 ~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~ 114 (263)
T d1npea_ 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR 114 (263)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEE
Confidence 45678899998888776654 45778888887655544444444678999998766635556667789999998754432
Q ss_pred hhhhhccccceEEEEEecCCCEEEEEeCC-CeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEe-eCCCc
Q psy14906 241 NQIKKAHRKVVTGAHFLYNEPLLVTSSPD-NTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSA-AGDST 318 (583)
Q Consensus 241 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~ 318 (583)
..+ ......+..+++.|...+++-.... +..+|+..+........+ ....-..+..+++.+ .++.|+.+ ...+.
T Consensus 115 ~l~-~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i--~~~~~~~P~glaiD~-~~~~lYw~d~~~~~ 190 (263)
T d1npea_ 115 VLF-DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL--AQDNLGLPNGLTFDA-FSSQLCWVDAGTHR 190 (263)
T ss_dssp EEE-CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE--ECTTCSCEEEEEEET-TTTEEEEEETTTTE
T ss_pred EEe-cccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCCceee--eeecccccceEEEee-cCcEEEEEeCCCCE
Confidence 222 2334578899999987776654332 344566555432222222 222234557899987 45555444 45677
Q ss_pred EEEEEcccc
Q psy14906 319 LRIFNTKSE 327 (583)
Q Consensus 319 i~iwd~~~~ 327 (583)
|...++...
T Consensus 191 I~~~~~~g~ 199 (263)
T d1npea_ 191 AECLNPAQP 199 (263)
T ss_dssp EEEEETTEE
T ss_pred EEEEECCCC
Confidence 777777543
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=98.22 E-value=7.3e-05 Score=68.45 Aligned_cols=114 Identities=5% Similarity=-0.054 Sum_probs=71.5
Q ss_pred ceEEEeeCCCCCEEEEEecCC-----------eEEEEEccCCceeE--EEe-ccCCCeEEEEEecCCCCEEEEEcCC-Cc
Q psy14906 164 CVNVLEPSPVVDIIGVGLSNK-----------KIILHNILTDESLM--EFI-QTWGPVTALSFRTDGPPMMVSGSNT-GH 228 (583)
Q Consensus 164 ~i~~~~~s~~~~~l~~~~~d~-----------~i~iw~~~~~~~~~--~~~-~~~~~v~~~~~~~~~~~~l~s~~~d-g~ 228 (583)
++...+...+|+.++.|+.+. .+.+||..+++-.. ... .+.......++.+++. +++.|+.+ ..
T Consensus 21 ~~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~-i~v~Gg~~~~~ 99 (387)
T d1k3ia3 21 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQ-IVVTGGNDAKK 99 (387)
T ss_dssp CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSC-EEEECSSSTTC
T ss_pred ccEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCc-EEEeecCCCcc
Confidence 444455567889888887431 37799998875432 222 2223344667889998 77777654 57
Q ss_pred EEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCC------CeEEEEEcc
Q psy14906 229 LTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPD------NTLKLWIFD 278 (583)
Q Consensus 229 i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d------~~i~~w~~~ 278 (583)
+.+||..+..-...-.......-...+..+||++++.++.+ ..+.+||..
T Consensus 100 ~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~ 155 (387)
T d1k3ia3 100 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPS 155 (387)
T ss_dssp EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETT
T ss_pred eeEecCccCcccccccccccccccceeeecCCceeeeccccccccccceeeeecCC
Confidence 99999987654322111112223456778899999988753 357788543
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.22 E-value=0.00096 Score=55.54 Aligned_cols=221 Identities=8% Similarity=0.100 Sum_probs=145.3
Q ss_pred EEEeCCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEe-eCeEEEEEcCCeEEEEeccc--eeeeeecccCc-
Q psy14906 37 RFIRRRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSS-DFFHIYTSANNIIYAWRRGI--DIVGTYKGHTS- 112 (583)
Q Consensus 37 ~~~p~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~~~~~~i~vw~~~~--~~~~~~~~h~~- 112 (583)
-.+|.. .+|+.-.+..+.++|+++.+.++...- .++|.--.+ +.+.+.--.+..|+-|++++ .+.+.+..|..
T Consensus 69 IMhP~~--~IiALrag~~LQiFnletK~klks~~~-~e~VvfWkWis~~~L~lVT~taVYHW~~~g~s~P~k~fdR~~~L 145 (327)
T d1utca2 69 IMNPAS--KVIALKAGKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSL 145 (327)
T ss_dssp EECSSS--SEEEEEETTEEEEEETTTTEEEEEEEC-SSCCCEEEESSSSEEEEECSSEEEEEESSSSCCCEEEEECCGGG
T ss_pred hcCCCC--cEEEEecCCeEEEEehhHhhhhceEEc-CCCcEEEEecCCCEEEEEcCCceEEEcccCCCCchhhhhhcccc
Confidence 355554 446666799999999999999987763 345655555 77788777899999999844 56777776643
Q ss_pred ---cEEEE--ccCCCEEEEEe---C----CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCC---CEE
Q psy14906 113 ---PVHLI--LPFGPHLISVD---E----ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVV---DII 177 (583)
Q Consensus 113 ---~v~~i--s~~~~~l~s~~---~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l 177 (583)
.|... ++++++++..+ . .|.+.+|..+.+ .-+.++ +|......+.+..+. +++
T Consensus 146 ~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~-~sQ~ie-----------Ghaa~F~~~~~~g~~~~~~lf 213 (327)
T d1utca2 146 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIE-----------GHAASFAQFKMEGNAEESTLF 213 (327)
T ss_dssp TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEEC-----------CSEEEEEEECCTTCSSCEEEE
T ss_pred cCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccC-cCcccc-----------ceeeeeEEEEcCCCCCCceEE
Confidence 34443 88899887543 2 367889998764 334444 665555555443221 233
Q ss_pred EEEe---cCCeEEEEEccCCc---e-----eEEEe----ccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhh
Q psy14906 178 GVGL---SNKKIILHNILTDE---S-----LMEFI----QTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQ 242 (583)
Q Consensus 178 ~~~~---~d~~i~iw~~~~~~---~-----~~~~~----~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 242 (583)
+.+. ..+.+.|.++.... . ...+. ...+-.-++..++.-. +++.-+.-|.+++||++++.++..
T Consensus 214 ~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kyg-iiyviTK~G~i~lyDleTgt~i~~ 292 (327)
T d1utca2 214 CFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIYM 292 (327)
T ss_dssp EEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCC-EEEEEecCcEEEEEEcccccEEEE
Confidence 3332 23578888876421 1 11111 1234566788888766 888899999999999999998876
Q ss_pred hhhccccceEEEEEecCCCEEEEEeCCCeEEE
Q psy14906 243 IKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKL 274 (583)
Q Consensus 243 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~ 274 (583)
- +-..+.|...+-..+..-++....+|.|..
T Consensus 293 n-RIs~~~iF~~a~~~~~~Gi~~VNr~GqVl~ 323 (327)
T d1utca2 293 N-RISGETIFVTAPHEATAGIIGVNRKGQVLS 323 (327)
T ss_dssp E-ECCSSCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred e-ecCCCceEEeccCCCCceEEEECCCCeEEE
Confidence 6 445667765555555555666667776543
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.21 E-value=0.003 Score=60.55 Aligned_cols=80 Identities=9% Similarity=-0.030 Sum_probs=60.0
Q ss_pred CCcEEEEEccCCCCCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEeecccccc-eeeEEecCCCc-
Q psy14906 480 DQTVKVWHFKQTGKPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKLSGHMGQ-LTDADFSPDSR- 557 (583)
Q Consensus 480 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~h~~~-v~~l~~s~d~~- 557 (583)
.|.|.-+|+.++ +.+.......++..-.++..|.++++|+.||.++.+|.++|+++.+++-.... -.-+.|..||+
T Consensus 465 ~G~l~AiD~~TG--~i~W~~~~~~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~q 542 (582)
T d1flga_ 465 VGSLRAMDPVSG--KVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp SEEEEEECTTTC--CEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CCeEEEEcCCCC--cEEeecCCCCCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEE
Confidence 477888999998 88888777766665555667888889999999999999999999887743221 11256777885
Q ss_pred EEEE
Q psy14906 558 WLIT 561 (583)
Q Consensus 558 ~l~s 561 (583)
|++.
T Consensus 543 Yv~i 546 (582)
T d1flga_ 543 YLGV 546 (582)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=98.17 E-value=0.0012 Score=54.87 Aligned_cols=261 Identities=15% Similarity=0.184 Sum_probs=155.3
Q ss_pred CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEE
Q psy14906 130 ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTA 209 (583)
Q Consensus 130 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~ 209 (583)
...+.|-|+.++....+.+. . -.+.-.+|..+.||.-+ ..++.++|+++.+.++.+... .+|.-
T Consensus 44 ~~~VvIidl~n~~~~~Rrpi----------~----AdsAIMhP~~~IiALra-g~~LQiFnletK~klks~~~~-e~Vvf 107 (327)
T d1utca2 44 QAQVVIIDMNDPSNPIRRPI----------S----ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTF 107 (327)
T ss_dssp EEEEEEEETTSTTSCEEEEC----------C----CSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCE
T ss_pred CceEEEEECCCCCcceeccc----------c----hhhhhcCCCCcEEEEec-CCeEEEEehhHhhhhceEEcC-CCcEE
Confidence 35788888887654443332 1 12344678888888766 458999999999999998887 57777
Q ss_pred EEEecCCCCEEEEEcCCCcEEEEeCCCC-eehhhhhhcc----ccceEEEEEecCCCEEEEEe-------CCCeEEEEEc
Q psy14906 210 LSFRTDGPPMMVSGSNTGHLTVWNLEDR-QVENQIKKAH----RKVVTGAHFLYNEPLLVTSS-------PDNTLKLWIF 277 (583)
Q Consensus 210 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~-------~d~~i~~w~~ 277 (583)
-.|-.+.. |+-.+ +..|.-|+++.. ++.+.+ .-| ...|..-..++++++++..+ -.|.+.+|..
T Consensus 108 WkWis~~~--L~lVT-~taVYHW~~~g~s~P~k~f-dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~ 183 (327)
T d1utca2 108 WKWISLNT--VALVT-DNAVYHWSMEGESQPVKMF-DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSV 183 (327)
T ss_dssp EEESSSSE--EEEEC-SSEEEEEESSSSCCCEEEE-ECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEET
T ss_pred EEecCCCE--EEEEc-CCceEEEcccCCCCchhhh-hhcccccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEe
Confidence 78877764 55444 347999999643 333333 222 34677777888899877544 2377889966
Q ss_pred cCCCCCceeeEEeccCCCCCeeEEEeeC-C-CCEEEEee---CCCcEEEEEcccccc-ceeeccchhhhhhhhhhcchhc
Q psy14906 278 DKADGNGRLLRIREGHSAPPNYIQFYGN-S-SDNILSAA---GDSTLRIFNTKSETS-NKNLGIASANRNNLKRKNRLEK 351 (583)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~-~~~l~~~~---~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 351 (583)
+.+.-+.++||.+....+....+ . ...++.+. ..+.+.+.++..... ...+..
T Consensus 184 -----er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~k---------------- 242 (327)
T d1utca2 184 -----DRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPK---------------- 242 (327)
T ss_dssp -----TTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCC----------------
T ss_pred -----ccCcCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcc----------------
Confidence 34566777888654333332210 0 11222221 124555555443211 000000
Q ss_pred cccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe
Q psy14906 352 MNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY 431 (583)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 431 (583)
-. .+..+.++ ....-..++..++.-..++.-+
T Consensus 243 ------------k~--------------------------------vdi~fppe----a~~DFPvamqvs~kygiiyviT 274 (327)
T d1utca2 243 ------------KA--------------------------------VDVFFPPE----AQNDFPVAMQISEKHDVVFLIT 274 (327)
T ss_dssp ------------EE--------------------------------EECCCCTT----CTTCCEEEEEEETTTTEEEEEE
T ss_pred ------------ee--------------------------------EEEECCcc----ccCCcEEEEEeeccCCEEEEEe
Confidence 00 00000010 1113466888899888999999
Q ss_pred cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEE
Q psy14906 432 SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVK 484 (583)
Q Consensus 432 ~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~ 484 (583)
.-|.|++||++++.++..- +-....|...+-..+..-++....+|.|.
T Consensus 275 K~G~i~lyDleTgt~i~~n-----RIs~~~iF~~a~~~~~~Gi~~VNr~GqVl 322 (327)
T d1utca2 275 KYGYIHLYDLETGTCIYMN-----RISGETIFVTAPHEATAGIIGVNRKGQVL 322 (327)
T ss_dssp TTSEEEEEETTTCCEEEEE-----ECCSSCEEEEEEETTTTEEEEEETTSEEE
T ss_pred cCcEEEEEEcccccEEEEe-----ecCCCceEEeccCCCCceEEEECCCCeEE
Confidence 9999999999999988765 34455555444444444455555666553
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.16 E-value=0.0015 Score=55.38 Aligned_cols=238 Identities=10% Similarity=0.027 Sum_probs=134.6
Q ss_pred cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEe-CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCC
Q psy14906 228 HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS-PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNS 306 (583)
Q Consensus 228 ~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 306 (583)
.|+-.++.+.+....+ .....+.+++|.+.++.|+-.. ..+.|.-.+++..................+..+++.+..
T Consensus 11 ~I~~~~l~~~~~~~~~--~~~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~~ 88 (266)
T d1ijqa1 11 EVRKMTLDRSEYTSLI--PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (266)
T ss_dssp SEEEEETTSCCCEEEE--CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred eEEEEECCCCcceeee--CCCCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeecc
Confidence 5888899865433333 3455678999998887776654 456666665553322222223333334557788887644
Q ss_pred CCEEEEeeCCCcEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEecCCce
Q psy14906 307 SDNILSAAGDSTLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNK 386 (583)
Q Consensus 307 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (583)
++..++-...+.|.+.++........+.
T Consensus 89 ~~lY~~d~~~~~I~v~~~~g~~~~~~~~---------------------------------------------------- 116 (266)
T d1ijqa1 89 SNIYWTDSVLGTVSVADTKGVKRKTLFR---------------------------------------------------- 116 (266)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEE----------------------------------------------------
T ss_pred ceEEEEecCCCEEEeEecCCceEEEEEc----------------------------------------------------
Confidence 4444444556778888876543211110
Q ss_pred EEEeecCcccccceeeecccccccCCCCceEEEEccCCcEEEEEe--cCceEEEEEcccCccccccCCCCCCCcccCeeE
Q psy14906 387 VSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGY--SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRG 464 (583)
Q Consensus 387 i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~ 464 (583)
.....+..++++|...+++... ..+.|...++......... ...-....+
T Consensus 117 -----------------------~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~-----~~~~~~p~g 168 (266)
T d1ijqa1 117 -----------------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-----TENIQWPNG 168 (266)
T ss_dssp -----------------------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE-----CSSCSCEEE
T ss_pred -----------------------CCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCceeccc-----ccccceeeE
Confidence 0003567888888766665543 3456777776544333322 233456789
Q ss_pred EEEeCCCcEEEEe-ecCCcEEEEEccCCCCCceEEeecc---CCeeeEEeccCCcEEEEEeCCceEEEEEccccceEEee
Q psy14906 465 VVSDNLNQIVISG-GNDQTVKVWHFKQTGKPPLRSIKLD---NGISFFRTHQESSMLAVCLDDFTVNIIDIDTCTIIRKL 540 (583)
Q Consensus 465 ~~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 540 (583)
+++++.++.|+-+ ...+.|...++... ......... .....+++. ++.+..+-..++.|+..+..+++....+
T Consensus 169 l~iD~~~~~lYw~d~~~~~I~~~~~dG~--~~~~~~~~~~~~~~p~~lav~-~~~ly~td~~~~~I~~~~~~~g~~~~~~ 245 (266)
T d1ijqa1 169 ITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (266)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEeeccccEEEEecCCcCEEEEEECCCC--CEEEEEeCCCcccccEEEEEE-CCEEEEEECCCCeEEEEECCCCcceEEE
Confidence 9999877766555 55678888888765 333333222 234556665 2333344346678888887777665555
Q ss_pred cccccceeeE
Q psy14906 541 SGHMGQLTDA 550 (583)
Q Consensus 541 ~~h~~~v~~l 550 (583)
......+..+
T Consensus 246 ~~~~~~p~~i 255 (266)
T d1ijqa1 246 AENLLSPEDM 255 (266)
T ss_dssp ECSCSCCCCE
T ss_pred EcCCCCceEE
Confidence 5443434444
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=98.16 E-value=0.00067 Score=65.02 Aligned_cols=200 Identities=10% Similarity=0.057 Sum_probs=113.2
Q ss_pred ceEEEEeeCCeEEEEecCCcEEEeecCCCC----------CCe-EEEE-eeCeEEEEEcCCeEEEEec-cceeeeeecc-
Q psy14906 44 ETLFVTCVGKAFHVYGCNHFKLLSVSPQHE----------DDI-TCLS-SDFFHIYTSANNIIYAWRR-GIDIVGTYKG- 109 (583)
Q Consensus 44 ~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~----------~~v-~~~~-~~~~~~~~~~~~~i~vw~~-~~~~~~~~~~- 109 (583)
..+++++.++.|.-+|.++|+++-.+.... ..+ ..++ .+++++.+..++.+.-.|. +++.+-....
T Consensus 78 g~vyv~t~~~~v~AlDa~TG~~~W~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~t~~g~l~alda~tG~~~W~~~~~ 157 (573)
T d1kb0a2 78 GIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDGRLIALDAATGKEVWHQNTF 157 (573)
T ss_dssp TEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTSEEEEEETTTCCEEEEEETT
T ss_pred CEEEEECCCCeEEEEeCCCCCeEEEeCCCCCcccccccccccccccceEECCcEEEEecccceeeeccccccceecccCc
Confidence 445566678889999999999997653210 011 1222 3567777888888877774 4555433321
Q ss_pred -c-CccEEEE-cc--CCCEEEEEeC------CCcEEEEEcCCCcEEEEeeccCCceEEe--------c------------
Q psy14906 110 -H-TSPVHLI-LP--FGPHLISVDE------ESNVKVWDIKAEETYLELSFDNDTFKIM--------G------------ 158 (583)
Q Consensus 110 -h-~~~v~~i-s~--~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~--------~------------ 158 (583)
+ ...+... .| .+..++.++. .|.|+-+|..+|+.+.+....+...... +
T Consensus 158 ~~~~~~~~~~~~p~v~~~~vivg~~~~~~~~~G~v~a~D~~TG~~~W~~~t~~~~~~~~~~~~~~~~~~~t~~~~~~~~~ 237 (573)
T d1kb0a2 158 EGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWE 237 (573)
T ss_dssp TTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHH
T ss_pred cCCcceEEeecceEEEeccEEEeeccccccccceEEEEecCCccceeeeeeccccCCCCCCcccccccccccCCCCceee
Confidence 1 1112111 11 2344444432 4689999999999998875432111000 0
Q ss_pred ccCCcce-EEEeeCCCCCEEEEEec-------------------CCeEEEEEccCCceeEEEeccCC---------CeEE
Q psy14906 159 KRWNSCV-NVLEPSPVVDIIGVGLS-------------------NKKIILHNILTDESLMEFIQTWG---------PVTA 209 (583)
Q Consensus 159 ~~~~~~i-~~~~~s~~~~~l~~~~~-------------------d~~i~iw~~~~~~~~~~~~~~~~---------~v~~ 209 (583)
......+ ...++.++..++..+.. ...|.-.|.++++....++.... +...
T Consensus 238 ~~~G~~vW~~~s~D~~~g~~~~~~g~~~~~~~~~~~~~~g~~~~~~svvAld~~tG~~~W~~q~~~~d~wd~d~~~~~~l 317 (573)
T d1kb0a2 238 AGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMIL 317 (573)
T ss_dssp HCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEE
T ss_pred cCCCCcccccceEchhhCeeeeccCCCccccccccccccccccccceEEEecccchheeecccccCcccccccccceeee
Confidence 0000111 12445566655554321 13577788888888877653211 2222
Q ss_pred EEEecCCC--CEEEEEcCCCcEEEEeCCCCeehhhh
Q psy14906 210 LSFRTDGP--PMMVSGSNTGHLTVWNLEDRQVENQI 243 (583)
Q Consensus 210 ~~~~~~~~--~~l~s~~~dg~i~vwd~~~~~~~~~~ 243 (583)
.....++. ..++.++.+|.+.++|..+++.+...
T Consensus 318 ~~~~~~g~~~~~v~~~~k~G~l~~lDr~tGe~~~~~ 353 (573)
T d1kb0a2 318 ADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAK 353 (573)
T ss_dssp EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred cceecCCCceeeeeeccccceeEEeccccccccccc
Confidence 23333332 26778889999999999999987655
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=98.11 E-value=0.0025 Score=57.78 Aligned_cols=118 Identities=14% Similarity=0.092 Sum_probs=67.4
Q ss_pred CeEEEEEecCCCCEEEEEcCC-----C------cEEEEeCCCCeehhh--hhhccccceEEEEEecCCCEEEEEeCC-Ce
Q psy14906 206 PVTALSFRTDGPPMMVSGSNT-----G------HLTVWNLEDRQVENQ--IKKAHRKVVTGAHFLYNEPLLVTSSPD-NT 271 (583)
Q Consensus 206 ~v~~~~~~~~~~~~l~s~~~d-----g------~i~vwd~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~~~d-~~ 271 (583)
.+.......+|+ +++.|+.+ + .+.+||..+++-... ....|.......++.+++++++.|+.+ ..
T Consensus 21 ~~~~a~~~~~gk-v~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~ 99 (387)
T d1k3ia3 21 PAAAAIEPTSGR-VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKK 99 (387)
T ss_dssp CSEEEEETTTTE-EEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTC
T ss_pred ccEEEEEeeCCE-EEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcc
Confidence 333334445666 66666532 1 267899998764332 112233333456788999999988765 57
Q ss_pred EEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCC------CcEEEEEccccc
Q psy14906 272 LKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGD------STLRIFNTKSET 328 (583)
Q Consensus 272 i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~ 328 (583)
+.+||.... .......+.... .-...+..+ |++.++.++.+ ..+.+||..+.+
T Consensus 100 ~~~yd~~~~--~w~~~~~~~~~r-~~~~~~~~~-dG~v~v~GG~~~~~~~~~~v~~yd~~~~~ 158 (387)
T d1k3ia3 100 TSLYDSSSD--SWIPGPDMQVAR-GYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKT 158 (387)
T ss_dssp EEEEEGGGT--EEEECCCCSSCC-SSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred eeEecCccC--cccccccccccc-cccceeeec-CCceeeeccccccccccceeeeecCCCCc
Confidence 899965432 222222222211 123445554 78888888753 357888877654
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.92 E-value=0.0045 Score=54.57 Aligned_cols=254 Identities=12% Similarity=0.052 Sum_probs=148.5
Q ss_pred EEEEeeCCCcEEEEEccccccceeeccchhhh---------hhhh-hhcchhcccc--------ccCCCccceee-eecc
Q psy14906 309 NILSAAGDSTLRIFNTKSETSNKNLGIASANR---------NNLK-RKNRLEKMNE--------KFILPPVSQFS-FGLA 369 (583)
Q Consensus 309 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---------~~~~-~~~~~~~~~~--------~~~~~~~~~~~-~~~~ 369 (583)
.+.+|+..|.++++-+.+.+.++.+..-.... .... ..+......+ .........-. ....
T Consensus 15 ~f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~Td 94 (459)
T d1fwxa2 15 GFWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTE 94 (459)
T ss_dssp EEECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEET
T ss_pred EEeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccccC
Confidence 36678889999999999998877763211110 0000 0000000000 00000111111 1122
Q ss_pred cccccccEEEEecCCceEEEeecCcccccceeeecccccccCCCCceEEEEcc--CCcEEEEEecC--------------
Q psy14906 370 REKDWNNIAAIHTGKNKVSLWSFYKSKMDDMFLVPERCKQAKQSKPTCVYITH--CGNFVLIGYSS-------------- 433 (583)
Q Consensus 370 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~d-------------- 433 (583)
...+...+++....+.++.+.|+...+..+....+.. ..+..+...+ +-.+++.++..
T Consensus 95 GtyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~------~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~ 168 (459)
T d1fwxa2 95 GKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNA------KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV 168 (459)
T ss_dssp TEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSC------CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG
T ss_pred CccceeEEEEEcCCCceEEEEECcceeeeEEEecCCC------CCCceeecccCCCeEEEEccCccccccCCCCccccch
Confidence 2334556667777888999999887765554333222 3445555544 44566665542
Q ss_pred ----ceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeecCC----------------------------
Q psy14906 434 ----GHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQ---------------------------- 481 (583)
Q Consensus 434 ----g~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg---------------------------- 481 (583)
+.+.++|..+.+...+.. -.+....+.++++|+++++.+.+.
T Consensus 169 ~~y~~~~t~ID~~tm~V~~QV~------V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~a 242 (459)
T d1fwxa2 169 ANYVNVFTAVDADKWEVAWQVL------VSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKA 242 (459)
T ss_dssp G-EEEEEEEEETTTTEEEEEEE------ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHH
T ss_pred hhcceEEEEEecCCceEEEEee------eCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHh
Confidence 346778888877766653 233566889999999988876431
Q ss_pred ----------cEEEEEccCC-CCCceEEeeccCCeeeEEeccCCcEEEEEeC-CceEEEEEccccce------------E
Q psy14906 482 ----------TVKVWHFKQT-GKPPLRSIKLDNGISFFRTHQESSMLAVCLD-DFTVNIIDIDTCTI------------I 537 (583)
Q Consensus 482 ----------~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~~~------------~ 537 (583)
.+.+-|.... ....++.+........+.++|||+++++++. +.++.++|++.... .
T Consensus 243 v~~Gk~~eingV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~ 322 (459)
T d1fwxa2 243 IAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV 322 (459)
T ss_dssp HHHTCSEEETTEEEEECSGG--CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEE
T ss_pred hhcCCcEEeCCceeecccccCCcceeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEE
Confidence 1233333321 1134445666677888999999998887665 78999999964221 1
Q ss_pred EeecccccceeeEEecCCCcEEEEEeCCCeEEEEeCCC
Q psy14906 538 RKLSGHMGQLTDADFSPDSRWLITASMDCTIRVWDIPS 575 (583)
Q Consensus 538 ~~~~~h~~~v~~l~~s~d~~~l~s~~~d~~i~vw~~~~ 575 (583)
.+.+ ..-.-..-+|...|.-..|.--|..|.-|++..
T Consensus 323 ~e~e-lglgPLht~fd~~g~aytslfids~v~kw~~~~ 359 (459)
T d1fwxa2 323 AEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 359 (459)
T ss_dssp ECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred eecc-cCcCccccccCCCceEEEEeeccceEEEEecch
Confidence 1111 223456678988887666777999999999853
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.86 E-value=0.014 Score=55.82 Aligned_cols=200 Identities=12% Similarity=0.091 Sum_probs=114.5
Q ss_pred ceEEEEeeCCeEEEEecCCcEEEeecCCC-----C---CCe-EEEEe-eCeEEEEEcCCeEEEEec-cceeeee--eccc
Q psy14906 44 ETLFVTCVGKAFHVYGCNHFKLLSVSPQH-----E---DDI-TCLSS-DFFHIYTSANNIIYAWRR-GIDIVGT--YKGH 110 (583)
Q Consensus 44 ~~~i~~~~~~~i~v~d~~~~~~~~~~~~h-----~---~~v-~~~~~-~~~~~~~~~~~~i~vw~~-~~~~~~~--~~~h 110 (583)
..+++++.++.|.-.|.++|+++-.+... . ..+ ..+++ +++++.++.++.+.-.|. .++.+-. +..+
T Consensus 69 g~vy~~t~~~~v~AlDa~TG~~lW~~~~~~~~~~~~~~~~~~rg~a~~~~~i~~~t~~~~l~alda~tG~~~W~~~~~~~ 148 (582)
T d1flga_ 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDASVVALNKNTGKVVWKKKFADH 148 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTTEEEEEESSSCCEEEEEECSCG
T ss_pred CEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCCccccccccccCCceEeCCceEEecCCCeEEEecccccceeeeecccCC
Confidence 44556667889999999999999664211 0 111 12333 567888888888877785 3544322 2111
Q ss_pred -------CccEEEE-ccCCCEEEEEe-------CCCcEEEEEcCCCcEEEEeeccCCceEEec-----------------
Q psy14906 111 -------TSPVHLI-LPFGPHLISVD-------EESNVKVWDIKAEETYLELSFDNDTFKIMG----------------- 158 (583)
Q Consensus 111 -------~~~v~~i-s~~~~~l~s~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~----------------- 158 (583)
..++..- -..+..++..+ ..+.|.-.|..+|+.+.+....+.......
T Consensus 149 ~~~~~~~~~p~~~~~~~~~~~~~i~g~~~~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~d~~~~g~~~~~~~~~ 228 (582)
T d1flga_ 149 GAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPD 228 (582)
T ss_dssp GGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCB
T ss_pred CccceeecCceEecCCcEeEEEEEeCccccccccccceEEecCCCCcEEEEEeccCCccccccccccccccccccccCCC
Confidence 1111111 11234444332 246799999999999988765443221110
Q ss_pred ------------ccCCcce-EEEeeCCCCCEEEEEec------------------------CCeEEEEEccCCceeEEEe
Q psy14906 159 ------------KRWNSCV-NVLEPSPVVDIIGVGLS------------------------NKKIILHNILTDESLMEFI 201 (583)
Q Consensus 159 ------------~~~~~~i-~~~~~s~~~~~l~~~~~------------------------d~~i~iw~~~~~~~~~~~~ 201 (583)
......+ ..+++.+...++..+.. ...+.-.|.++++....++
T Consensus 229 ~~~~~~~~~~~~~~~gg~vW~~~s~D~~~~~vy~~tgn~~p~~~~~~~~~g~~~~~~dn~ys~SvvAld~~tG~~~W~~q 308 (582)
T d1flga_ 229 DRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQ 308 (582)
T ss_dssp CTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEE
T ss_pred ccccccCCccceecCCCcccccceeccccceEEeccCCcccccccccccCCCCcCcccccccceeEEecccchhhhhccc
Confidence 0001112 23567777777766541 2357788899999988876
Q ss_pred ccCCCe---------EEEEEe-cCCC--CEEEEEcCCCcEEEEeCCCCeehhhh
Q psy14906 202 QTWGPV---------TALSFR-TDGP--PMMVSGSNTGHLTVWNLEDRQVENQI 243 (583)
Q Consensus 202 ~~~~~v---------~~~~~~-~~~~--~~l~s~~~dg~i~vwd~~~~~~~~~~ 243 (583)
.....+ .-+.+. .+++ ..++..+.++.+.++|..+++++...
T Consensus 309 ~~~~D~wd~d~~~~p~l~d~~~~~g~~~~~v~~~~k~g~~~vldr~tG~~i~~~ 362 (582)
T d1flga_ 309 HTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAF 362 (582)
T ss_dssp SSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ccccccccccccccccccccccccccccceeEeecccccEEeecccCCcccccc
Confidence 322211 112222 1222 25667788999999999999876544
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=97.76 E-value=0.019 Score=54.69 Aligned_cols=161 Identities=9% Similarity=0.041 Sum_probs=99.6
Q ss_pred eEEEEccCCcEEEEEecC----------------ceEEEEEcccCccccccCCCCCCCccc-------CeeEEEE-eCCC
Q psy14906 416 TCVYITHCGNFVLIGYSS----------------GHVDRFNIQSGAHRGSYGHDNQPGHVG-------GVRGVVS-DNLN 471 (583)
Q Consensus 416 ~~~~~s~~~~~l~~~~~d----------------g~i~i~d~~~~~~~~~~~~~~~~~h~~-------~v~~~~~-s~~~ 471 (583)
..+++.+...+++.+..+ ..|...|+.+|+....+.. ..|.. ...-+.. ..++
T Consensus 244 ~~~s~D~~~~lvy~~tg~~~p~~~~~r~g~n~ys~sivAlD~~TG~~~W~~Q~---~~~D~Wd~d~~~~~~l~d~~~~~G 320 (596)
T d1w6sa_ 244 GWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQK---TPHDEWDYAGVNVMMLSEQKDKDG 320 (596)
T ss_dssp SCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEES---STTCSSCCCCCCCCEEEEEECTTS
T ss_pred cccccccCCCeeecccccccccccccccccccccccccccccccccccccccc---eeccccCCccccceeeeecccccc
Confidence 345677777777776543 3578889999998765532 12211 1111111 2344
Q ss_pred ---cEEEEeecCCcEEEEEccCCCCCceEEeeccC----------------------------------------CeeeE
Q psy14906 472 ---QIVISGGNDQTVKVWHFKQTGKPPLRSIKLDN----------------------------------------GISFF 508 (583)
Q Consensus 472 ---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------------------------------------~v~~~ 508 (583)
+.++....+|.+.++|..++ +++...+... .-...
T Consensus 321 ~~~~~v~~~~k~G~~~vlDr~tG--~~i~~~~~~~~~~~~~~~d~~~~~p~~~~~~~~~~~~~~~~i~pg~~Gg~nw~~~ 398 (596)
T d1w6sa_ 321 KARKLLTHPDRNGIVYTLDRTDG--ALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHD 398 (596)
T ss_dssp CEEEEEEEECTTSEEEEEETTTC--CEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBC
T ss_pred ccccceeccccccceeeecCCCC--ceeeeccccccccccccccccccccccCccccccCCccceeEecccccccccCcc
Confidence 36778888999999999888 5554322110 00123
Q ss_pred EeccCCcEEEEEeC---------------------------------------CceEEEEEccccceEEeecccccceee
Q psy14906 509 RTHQESSMLAVCLD---------------------------------------DFTVNIIDIDTCTIIRKLSGHMGQLTD 549 (583)
Q Consensus 509 ~~s~~~~~l~~~~~---------------------------------------dg~i~i~d~~~~~~~~~~~~h~~~v~~ 549 (583)
+++|+..++.+... -|.|.-||+.+++.+.+.. +..+...
T Consensus 399 a~dp~~~l~yvp~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~g~~~~~~~~G~l~A~D~~TG~~~W~~~-~~~~~~g 477 (596)
T d1w6sa_ 399 SYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKM-ERFAVWG 477 (596)
T ss_dssp EEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEE-ESSCCCS
T ss_pred ccCCCCceEEecccccccccccccccccccccccccccccccCcccCcccCCCcceEEEEeCCCCceecccC-CCCCCcc
Confidence 55666555544321 1568888888888876554 2333333
Q ss_pred EEecCCCcEEEEEeCCCeEEEEeCCCccccccc
Q psy14906 550 ADFSPDSRWLITASMDCTIRVWDIPSSQLIDCF 582 (583)
Q Consensus 550 l~~s~d~~~l~s~~~d~~i~vw~~~~~~~~~~~ 582 (583)
=.++..+.+++.|+.||.++.+|.+||+.+=++
T Consensus 478 g~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~ 510 (596)
T d1w6sa_ 478 GTMATAGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (596)
T ss_dssp BCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ceeEecCCEEEEECCCCeEEEEECCCCcEeeEE
Confidence 334446778888999999999999999998554
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.73 E-value=0.0094 Score=50.13 Aligned_cols=231 Identities=7% Similarity=-0.044 Sum_probs=132.5
Q ss_pred eEEEEEcCCeEEEEeccceee------eeecccCccEEEE--ccCCCEEEEEe-CCCcEEEEEcCCCcEEEEeeccCCce
Q psy14906 84 FHIYTSANNIIYAWRRGIDIV------GTYKGHTSPVHLI--LPFGPHLISVD-EESNVKVWDIKAEETYLELSFDNDTF 154 (583)
Q Consensus 84 ~~~~~~~~~~i~vw~~~~~~~------~~~~~h~~~v~~i--s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~ 154 (583)
.+|..+..+.|+-.++++... ..+..+...+.++ .+..+.|.-+. .++.|+..++..+.....+.
T Consensus 2 ~fLl~s~~~~I~~~~ld~~~~~~~~~~~~~~~~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~------ 75 (263)
T d1npea_ 2 THLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR------ 75 (263)
T ss_dssp EEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC------
T ss_pred CEEEEeCCCeEEEEECCCccccccccccccccCCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEE------
Confidence 345555556666666543221 1233333344444 44556565543 45678887877655444343
Q ss_pred EEecccCCcceEEEeeCCCCCEEEEE-ecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCc--EEE
Q psy14906 155 KIMGKRWNSCVNVLEPSPVVDIIGVG-LSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGH--LTV 231 (583)
Q Consensus 155 ~~~~~~~~~~i~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~--i~v 231 (583)
.....+..+++..-++.|..+ ...+.|.+.++........+......+..+++.|....++.+-...+. |.-
T Consensus 76 -----~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r 150 (263)
T d1npea_ 76 -----QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIET 150 (263)
T ss_dssp -----TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEE
T ss_pred -----eccccccEEEEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEE
Confidence 333567889998767666554 456789999987554433333434678999999987734444332233 444
Q ss_pred EeCCCCeehhhhhhccccceEEEEEecCCCEEEEEe-CCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEE
Q psy14906 232 WNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS-PDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNI 310 (583)
Q Consensus 232 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 310 (583)
-++......... ...-....++++.+.++.|.-+. ..+.|...+++.. .....+.+.. ...++++. ++...
T Consensus 151 ~~~dG~~~~~i~-~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~----~~~~v~~~~~-~P~~lav~--~~~lY 222 (263)
T d1npea_ 151 SHMDGTNRRILA-QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP----GRRKVLEGLQ-YPFAVTSY--GKNLY 222 (263)
T ss_dssp EETTSCCCEEEE-CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE----EEEEEEECCC-SEEEEEEE--TTEEE
T ss_pred ecCCCCCceeee-eecccccceEEEeecCcEEEEEeCCCCEEEEEECCCC----CeEEEECCCC-CcEEEEEE--CCEEE
Confidence 455533222222 22334668999998887776554 5677777765421 1112223322 34678875 34444
Q ss_pred EEeeCCCcEEEEEccccccceee
Q psy14906 311 LSAAGDSTLRIFNTKSETSNKNL 333 (583)
Q Consensus 311 ~~~~~dg~i~iwd~~~~~~~~~~ 333 (583)
.+-...+.|...|..+++....+
T Consensus 223 wtd~~~~~I~~~~~~~g~~~~~~ 245 (263)
T d1npea_ 223 YTDWKTNSVIAMDLAISKEMDTF 245 (263)
T ss_dssp EEETTTTEEEEEETTTTEEEEEE
T ss_pred EEECCCCEEEEEECCCCccceEE
Confidence 45456788999998887765544
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.69 E-value=0.014 Score=51.34 Aligned_cols=300 Identities=10% Similarity=0.018 Sum_probs=161.0
Q ss_pred EEEEecCCeEEEEEccCCceeEEEecc---------------------------------------CCCe--EEEEEec-
Q psy14906 177 IGVGLSNKKIILHNILTDESLMEFIQT---------------------------------------WGPV--TALSFRT- 214 (583)
Q Consensus 177 l~~~~~d~~i~iw~~~~~~~~~~~~~~---------------------------------------~~~v--~~~~~~~- 214 (583)
+.+|+..|+|+|+-+.+++.++.+.-. .+.. ..+++..
T Consensus 16 f~SgG~sG~v~v~G~PSmR~l~~ipvF~~~~~~G~G~~~es~~il~~~~~~~t~~~l~~~g~~~~~~GD~HHP~~S~TdG 95 (459)
T d1fwxa2 16 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 95 (459)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCC--------------CCCCCBCCEEEEEETT
T ss_pred EeeCCccceEEEEecCCcceEEEeeeecCCCCcccCcchhHHHHhhcccChhhhhhhhccCcccccCCCcCCCcccccCC
Confidence 456788889999988887776665200 0011 2455654
Q ss_pred --CCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEe--cCCCEEEEEeCCC------------------eE
Q psy14906 215 --DGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFL--YNEPLLVTSSPDN------------------TL 272 (583)
Q Consensus 215 --~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~~~d~------------------~i 272 (583)
||+++++.-..+..|.+-|+.+.+..+.+.......+..+... |+..+++..+.+. .+
T Consensus 96 tyDGrylFVNDkan~RVAvIdl~~fkt~kIi~iPn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~ 175 (459)
T d1fwxa2 96 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 175 (459)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEE
T ss_pred ccceeEEEEEcCCCceEEEEECcceeeeEEEecCCCCCCceeecccCCCeEEEEccCccccccCCCCccccchhhcceEE
Confidence 7887777777899999999999887664422344566666664 4556777766533 23
Q ss_pred EEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCC--cEEEEEccccccceeeccchhhhhhhhhhcchh
Q psy14906 273 KLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDS--TLRIFNTKSETSNKNLGIASANRNNLKRKNRLE 350 (583)
Q Consensus 273 ~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (583)
...|. . +.+....... ......+.+++ +|+++++.+.+. .+.+.++............-.......+.+...
T Consensus 176 t~ID~--~--tm~V~~QV~V-~g~ld~~~~s~-dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~ 249 (459)
T d1fwxa2 176 TAVDA--D--KWEVAWQVLV-SGNLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 249 (459)
T ss_dssp EEEET--T--TTEEEEEEEE-SSCCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred EEEec--C--CceEEEEeee-CCChhccccCC-CCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcE
Confidence 34433 3 2233322221 23456788887 788888877532 111222211111000000000000000000000
Q ss_pred ccccccCCCccceeeeecccccccccEEEEecCCceEEEeecCcccc-cceeeecccccccCCCCceEEEEccCCcEEEE
Q psy14906 351 KMNEKFILPPVSQFSFGLAREKDWNNIAAIHTGKNKVSLWSFYKSKM-DDMFLVPERCKQAKQSKPTCVYITHCGNFVLI 429 (583)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 429 (583)
. + +.+.+.|...... ......+.. .....+.++|||+++++
T Consensus 250 e---------i-----------------------ngV~VVD~~~~~~~~v~~yIPVp------KsPHGV~vSPDGKyi~V 291 (459)
T d1fwxa2 250 E---------L-----------------------NGVKVVDGRKEASSLFTRYIPIA------NNPHGCNMAPDKKHLCV 291 (459)
T ss_dssp E---------E-----------------------TTEEEEECSGG--CSSEEEEEEE------SSCCCEEECTTSSEEEE
T ss_pred E---------e-----------------------CCceeecccccCCcceeEEEecC------CCCCceEECCCCCEEEE
Confidence 0 0 1122333322111 111111111 45678999999999887
Q ss_pred Ee-cCceEEEEEcccCcccc--------ccCCCCCCCcccCeeEEEEeCCCcEEEEeecCCcEEEEEccCC--------C
Q psy14906 430 GY-SSGHVDRFNIQSGAHRG--------SYGHDNQPGHVGGVRGVVSDNLNQIVISGGNDQTVKVWHFKQT--------G 492 (583)
Q Consensus 430 ~~-~dg~i~i~d~~~~~~~~--------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~--------~ 492 (583)
++ -+.++.++|++.-.... .+... ....-.-..-+|+.+|....|.--|..|.-|++... .
T Consensus 292 aGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e--~elglgPLht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~ 369 (459)
T d1fwxa2 292 AGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE--PELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKV 369 (459)
T ss_dssp ECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEEC--CBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSC
T ss_pred eCCcCCcEEEEEehhhhhhhcccCCccccEEee--cccCcCccccccCCCceEEEEeeccceEEEEecchhhhhhccccC
Confidence 65 58899999986422111 00000 122334456688888876666678999999998532 1
Q ss_pred CCceEEeeccCCeeeEE------eccCCcEEEEEeC
Q psy14906 493 KPPLRSIKLDNGISFFR------THQESSMLAVCLD 522 (583)
Q Consensus 493 ~~~~~~~~~~~~v~~~~------~s~~~~~l~~~~~ 522 (583)
...+..+..+..+-.+. ..|||++|++...
T Consensus 370 ~~v~~k~~v~y~~gh~~~~~g~t~~~dgk~l~~~nk 405 (459)
T d1fwxa2 370 DPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 405 (459)
T ss_dssp CCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CcceeccccccCCCCCccCcCCcCCCCCCEEEEecc
Confidence 13345555555555543 3689999998763
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.60 E-value=0.015 Score=49.03 Aligned_cols=166 Identities=9% Similarity=-0.033 Sum_probs=101.8
Q ss_pred cceEEEeeCCCCCEEEEE-ecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEE-cCCCcEEEEeCCCCeeh
Q psy14906 163 SCVNVLEPSPVVDIIGVG-LSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSG-SNTGHLTVWNLEDRQVE 240 (583)
Q Consensus 163 ~~i~~~~~s~~~~~l~~~-~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~-~~dg~i~vwd~~~~~~~ 240 (583)
..+..|++.+.++.|..+ ...+.|.+.++........+.........++..|....++.+. +..+.|.-.++......
T Consensus 77 ~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~ 156 (266)
T d1ijqa1 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 156 (266)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred CCcceEEEeeccceEEEEecCCCEEEeEecCCceEEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCcee
Confidence 456678888766666554 4557899999876555555555556789999999766344443 23456777777643332
Q ss_pred hhhhhccccceEEEEEecCCCEEEEE-eCCCeEEEEEccCCCCCceeeEEeccCCCCCeeEEEeeCCCCEEEEeeCCCcE
Q psy14906 241 NQIKKAHRKVVTGAHFLYNEPLLVTS-SPDNTLKLWIFDKADGNGRLLRIREGHSAPPNYIQFYGNSSDNILSAAGDSTL 319 (583)
Q Consensus 241 ~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~i~~w~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 319 (583)
... ...-.....+++.+.++.|.-+ ...+.|...+++.. ....+...........++++. ++....+-..++.|
T Consensus 157 ~l~-~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~--~~~~~~~~~~~~~~p~~lav~--~~~ly~td~~~~~I 231 (266)
T d1ijqa1 157 SLV-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAI 231 (266)
T ss_dssp EEE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEE
T ss_pred ccc-ccccceeeEEEeeccccEEEEecCCcCEEEEEECCCC--CEEEEEeCCCcccccEEEEEE--CCEEEEEECCCCeE
Confidence 222 2233567899999887766665 44577777766432 223333333333345677775 34444444567888
Q ss_pred EEEEccccccceee
Q psy14906 320 RIFNTKSETSNKNL 333 (583)
Q Consensus 320 ~iwd~~~~~~~~~~ 333 (583)
...+..++.....+
T Consensus 232 ~~~~~~~g~~~~~~ 245 (266)
T d1ijqa1 232 FSANRLTGSDVNLL 245 (266)
T ss_dssp EEEETTTCCCCEEE
T ss_pred EEEECCCCcceEEE
Confidence 88887777655443
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.38 E-value=0.048 Score=49.67 Aligned_cols=60 Identities=10% Similarity=0.154 Sum_probs=40.1
Q ss_pred CeEEEEEecCCCCEEEEEcCCC----cEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEe
Q psy14906 206 PVTALSFRTDGPPMMVSGSNTG----HLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSS 267 (583)
Q Consensus 206 ~v~~~~~~~~~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 267 (583)
.+...+++|++++++++-+..| .++++|+.+++.+... . .......++|.+|++.|+...
T Consensus 126 ~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~-i-~~~~~~~~~W~~D~~~~~Y~~ 189 (430)
T d1qfma1 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-L-ERVKFSCMAWTHDGKGMFYNA 189 (430)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-E-EEECSCCEEECTTSSEEEEEE
T ss_pred eecceEecCCCCEEEEEeccccCchheeEEeccCcceecccc-c-ccccccceEEcCCCCEEEEEE
Confidence 3445678999995555544444 5999999999876432 1 112235688999999877544
|
| >d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Prolyl oligopeptidase, N-terminal domain domain: Prolyl oligopeptidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.21 E-value=0.074 Score=48.36 Aligned_cols=116 Identities=18% Similarity=0.205 Sum_probs=69.8
Q ss_pred CcceEEEeeCCCCCEEEEEec-C----CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcC-----------
Q psy14906 162 NSCVNVLEPSPVVDIIGVGLS-N----KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSN----------- 225 (583)
Q Consensus 162 ~~~i~~~~~s~~~~~l~~~~~-d----~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~----------- 225 (583)
.-.+....+|||++++|.+-. . ..+++.|+.+++.+...-.. .....++|.+|++.++.+.-.
T Consensus 124 ~~~~~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~-~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~ 202 (430)
T d1qfma1 124 TVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET 202 (430)
T ss_dssp CEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred cceecceEecCCCCEEEEEeccccCchheeEEeccCcceeccccccc-ccccceEEcCCCCEEEEEEeccccCccccccc
Confidence 334456678999999986533 2 37999999999876532221 223578999999944444321
Q ss_pred ----CCcEEEEeCCCCeehhhhh-hc--cccceEEEEEecCCCEEEEEe---CCCeEEEEEcc
Q psy14906 226 ----TGHLTVWNLEDRQVENQIK-KA--HRKVVTGAHFLYNEPLLVTSS---PDNTLKLWIFD 278 (583)
Q Consensus 226 ----dg~i~vwd~~~~~~~~~~~-~~--~~~~v~~~~~~~~~~~l~s~~---~d~~i~~w~~~ 278 (583)
...|..+.+.+......+. .. ....+..+..++++++++... .+....+|.++
T Consensus 203 ~~~~~~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~~~d 265 (430)
T d1qfma1 203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCD 265 (430)
T ss_dssp CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEE
T ss_pred ccCCcceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEEEee
Confidence 1257777776653221110 11 223466777889999876432 23445566444
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=97.10 E-value=0.04 Score=47.82 Aligned_cols=122 Identities=11% Similarity=0.215 Sum_probs=81.1
Q ss_pred CeeEEEE--eCC-Cc-EEEEeecCCcEEEEEccCCC-----CCceEEeeccCCeeeEEeccCCcEEEEEeCCceEEEEEc
Q psy14906 461 GVRGVVS--DNL-NQ-IVISGGNDQTVKVWHFKQTG-----KPPLRSIKLDNGISFFRTHQESSMLAVCLDDFTVNIIDI 531 (583)
Q Consensus 461 ~v~~~~~--s~~-~~-~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 531 (583)
.+..+++ ++. +. +++....+|.+..|.+.... .++++.+.....+..+.+.+....|.++-++.-|..++.
T Consensus 129 ~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f~~~~q~EGCVvDde~~~LyisEE~~Giw~~~a 208 (353)
T d1h6la_ 129 EVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAFKMNSQTEGMAADDEYGSLYIAEEDEAIWKFSA 208 (353)
T ss_dssp SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEES
T ss_pred cceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeeccCCCCccceEEEeCCCCcEEEecCccceEEEEe
Confidence 4677776 554 43 56667788999999875432 134566777788999999999999999999877777765
Q ss_pred cc-----cceEEeecc--cccceeeEEec--CC--CcEEEEEeCCCeEEEEeCCC-ccccccc
Q psy14906 532 DT-----CTIIRKLSG--HMGQLTDADFS--PD--SRWLITASMDCTIRVWDIPS-SQLIDCF 582 (583)
Q Consensus 532 ~~-----~~~~~~~~~--h~~~v~~l~~s--~d--~~~l~s~~~d~~i~vw~~~~-~~~~~~~ 582 (583)
+. +..+....+ ..+.+..|+.- .+ |-+|||.-.+++..|||..+ .+.+..|
T Consensus 209 ~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vydr~~~~~~~g~F 271 (353)
T d1h6la_ 209 EPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYERQGQNKYVADF 271 (353)
T ss_dssp STTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred ccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEecCCCccccceE
Confidence 41 233323222 34567777653 23 33455555678999999876 4666554
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=97.07 E-value=0.073 Score=46.12 Aligned_cols=194 Identities=13% Similarity=0.189 Sum_probs=116.1
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEee------CCCCCEEEEEecC----CeEE
Q psy14906 118 LPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEP------SPVVDIIGVGLSN----KKII 187 (583)
Q Consensus 118 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~------s~~~~~l~~~~~d----~~i~ 187 (583)
.|+..+++.....+-|.++|++ |+.+..+. .+.++.+.. .....-+++++.. .+|.
T Consensus 37 ~p~~SlI~gTdK~~Gl~vYdL~-G~~l~~~~-------------~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~ 102 (353)
T d1h6la_ 37 NPQNSKLITTNKKSGLAVYSLE-GKMLHSYH-------------TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIE 102 (353)
T ss_dssp CGGGCEEEEEETTSCCEEEETT-CCEEEECC-------------SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEE
T ss_pred CcCccEEEEEcCcCCEEEEcCC-CcEEEecc-------------cCCcCccccccccccCCcceEEEEEeCCcCcceeEE
Confidence 4556677777777779999986 77777765 234444432 2233345666532 3688
Q ss_pred EEEccC-CceeEEEecc-------CCCeEEEEE--ecC-CCCEEEEEcCCCcEEEEeCC---CC----eehhhhhhcccc
Q psy14906 188 LHNILT-DESLMEFIQT-------WGPVTALSF--RTD-GPPMMVSGSNTGHLTVWNLE---DR----QVENQIKKAHRK 249 (583)
Q Consensus 188 iw~~~~-~~~~~~~~~~-------~~~v~~~~~--~~~-~~~~l~s~~~dg~i~vwd~~---~~----~~~~~~~~~~~~ 249 (583)
+|.+.. ...+..+... ...++.+|+ ++. +..+++....+|.+..|.+. .+ ++++.+ .-..
T Consensus 103 ~~~id~~~~~l~~~~~~~~p~~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~~~~g~v~~~lvr~f--~~~~ 180 (353)
T d1h6la_ 103 IYAIDGKNGTLQSITDPNRPIASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNADKNGYISGKKVRAF--KMNS 180 (353)
T ss_dssp EEEEETTTTEEEECSCSSSCEECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSSEEEEEEEEE--ECSS
T ss_pred EEEecCcccccccccccccccccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEcCCCCceeeEeeecc--CCCC
Confidence 888753 2333333321 134677777 554 44356777788999888763 22 344444 3356
Q ss_pred ceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCC-ceeeEEecc--CCCCCeeEEEeeC---CCCEEEEeeCCCcEEEEE
Q psy14906 250 VVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGN-GRLLRIREG--HSAPPNYIQFYGN---SSDNILSAAGDSTLRIFN 323 (583)
Q Consensus 250 ~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~-~~~~~~~~~--~~~~v~~~~~~~~---~~~~l~~~~~dg~i~iwd 323 (583)
.+-.|.+.++...|+.+-++.-+..++.+..... ...+....+ ....+..++.... +|-+|++.-.+++..+||
T Consensus 181 q~EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~~GylivSsQG~n~f~vyd 260 (353)
T d1h6la_ 181 QTEGMAADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADGKGYLLASSQGNSSYAIYE 260 (353)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEE
T ss_pred ccceEEEeCCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCCCeEEEEEcCCCCeEEEEe
Confidence 7889999999889999887764444433333222 222323222 4567778876532 233444555678999999
Q ss_pred cccc
Q psy14906 324 TKSE 327 (583)
Q Consensus 324 ~~~~ 327 (583)
....
T Consensus 261 r~~~ 264 (353)
T d1h6la_ 261 RQGQ 264 (353)
T ss_dssp SSTT
T ss_pred cCCC
Confidence 8763
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=95.47 E-value=0.67 Score=39.96 Aligned_cols=129 Identities=8% Similarity=-0.008 Sum_probs=73.1
Q ss_pred cCceEEEEEcccCccccccCCCCCCCcccCeeEEEEeCCCcEEEEeec---------------CCcEEEEEccCCCCCce
Q psy14906 432 SSGHVDRFNIQSGAHRGSYGHDNQPGHVGGVRGVVSDNLNQIVISGGN---------------DQTVKVWHFKQTGKPPL 496 (583)
Q Consensus 432 ~dg~i~i~d~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---------------dg~i~iwd~~~~~~~~~ 496 (583)
...+|.+|++........+............+.+++..++.+++|-.. -+...+|..+.. ...
T Consensus 122 ~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~--~~~ 199 (340)
T d1v04a_ 122 SSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVR 199 (340)
T ss_dssp TCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSS--CEE
T ss_pred CCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCC--ceE
Confidence 345688888764432111100000233455789999999998888321 123455555554 433
Q ss_pred EEeeccCCeeeEEeccCCcEEEEEe-CCceEEEEEccccceEEeec--ccccceeeEEecC-CCcEEEEE
Q psy14906 497 RSIKLDNGISFFRTHQESSMLAVCL-DDFTVNIIDIDTCTIIRKLS--GHMGQLTDADFSP-DSRWLITA 562 (583)
Q Consensus 497 ~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~--~h~~~v~~l~~s~-d~~~l~s~ 562 (583)
.....-...+.++++||+++|+++. ..++|+.|+++....+.... .-....-.+.+.+ +|.+.+.+
T Consensus 200 ~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~~d~~~g~lwva~ 269 (340)
T d1v04a_ 200 VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC 269 (340)
T ss_dssp EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred EEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccEEecCCCEEEEEE
Confidence 3344446788999999998776654 56789999987543222111 1223455667765 44444433
|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: beta-lactamase inhibitor protein-II, BLIP-II domain: beta-lactamase inhibitor protein-II, BLIP-II species: Streptomyces exfoliatus [TaxId: 1905]
Probab=95.23 E-value=0.6 Score=38.86 Aligned_cols=242 Identities=12% Similarity=0.093 Sum_probs=114.7
Q ss_pred CCeEEEEecCC-cEEEeecCCCCCCeEEEEeeCeEEEEEcCCeEEEEeccc-eeeeeecccCccEEEEccCCCEEEEEeC
Q psy14906 52 GKAFHVYGCNH-FKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGI-DIVGTYKGHTSPVHLILPFGPHLISVDE 129 (583)
Q Consensus 52 ~~~i~v~d~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~i~vw~~~~-~~~~~~~~h~~~v~~is~~~~~l~s~~~ 129 (583)
..+|+.|--.. +............|..++......++-.||.|.-|-.+. .++-.-......|..|+.-..+.+.- .
T Consensus 3 ~~sv~~WG~~~~~~~~~~~~~~~~~i~~va~G~~h~~al~dG~v~~wG~N~~GQlG~~~~~~~~v~~v~~G~~~~~al-~ 81 (273)
T d1jtdb_ 3 ATSVVAWGGNNDWGEATVPAEAQSGVDAIAGGYFHGLALKGGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL-K 81 (273)
T ss_dssp CSEEEEESSCCSSSTTCCCGGGSSSEEEEEECSSEEEEEETTEEEEEECCTTSTTSCCGGGGSCCCEEEECSSEEEEE-E
T ss_pred CCEEEEECCCCCCCceeccccCCCCcEEEEccCCEEEEEECCEEEEEeCCCCCceeeeecccccceEEecCCCceeee-e
Confidence 34677775332 222212223455688888844333333489999997532 11112222344555664434433333 4
Q ss_pred CCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEE
Q psy14906 130 ESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTA 209 (583)
Q Consensus 130 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~ 209 (583)
|+.+..|......++.... .....+..++.... ..+ ...|+.+..|.................|..
T Consensus 82 dg~v~~wG~~~~gq~~~~~-----------~~~~~~~~i~~~~~--~~~-~~~dg~v~~~g~~~~~~~~~~~~~~~~v~~ 147 (273)
T d1jtdb_ 82 DGEVIAWGGNEDGQTTVPA-----------EARSGVDAIAAGAW--ASY-ALKDGKVIAWGDDSDGQTTVPAEAQSGVTA 147 (273)
T ss_dssp TTEEEEEECCTTSTTCCCG-----------GGGSSCCEEEEETT--EEE-EEETTEEEEEECCTTSTTSCCGGGGSSEEE
T ss_pred eeeeeccCCCcceeecccc-----------ccccceeEEeeecc--ccc-ccccccceecccCCCCceeeeccCCceEEE
Confidence 8999999864421111100 11223333333221 222 235788888875432222211122234544
Q ss_pred EEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEE
Q psy14906 210 LSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRI 289 (583)
Q Consensus 210 ~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~ 289 (583)
++-. .. .++ ...++.+..|-.......... ......|..++... ...+.-. ||.|.-|=... .+++- .
T Consensus 148 ~~~~--~~-~~~-~~~~g~~~~~G~~~~g~~~~~-~~~~~~v~~Is~G~--~h~~~l~-dG~v~~WG~n~---~Gql~-~ 215 (273)
T d1jtdb_ 148 LDGG--VY-TAL-AVKNGGVIAWGDNYFGQTTVP-AEAQSGVDDVAGGI--FHSLALK-DGKVIAWGDNR---YKQTT-V 215 (273)
T ss_dssp EEEC--SS-EEE-EEETTEEEEEECCTTSTTSCC-GGGSSSEEEEEECS--SEEEEEE-TTEEEEEECCT---TSTTC-C
T ss_pred Eecc--ce-eee-eecccceeEeecccCCccccc-ccccCCccceeccc--eeeEEEe-cCcEEEcCCCC---CCccC-C
Confidence 4332 11 222 334678888876543322222 23455677776543 3333333 79998883221 11111 1
Q ss_pred eccCCCCCeeEEEeeCCCCEEEEeeCCCcEEEEEc
Q psy14906 290 REGHSAPPNYIQFYGNSSDNILSAAGDSTLRIFNT 324 (583)
Q Consensus 290 ~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~ 324 (583)
.......|..|+-. +...++. .||.|..|-.
T Consensus 216 ~~~~~~~v~~I~~G--~~~~~~l--~~g~v~~WG~ 246 (273)
T d1jtdb_ 216 PTEALSGVSAIASG--EWYSLAL--KNGKVIAWGS 246 (273)
T ss_dssp CGGGGSSCCEEEEC--SSCEEEE--ETTEEEEEST
T ss_pred CccCCCCcEEEEeC--cceEEEE--ECCEEEEECC
Confidence 11122356666643 3333443 3799999953
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.06 E-value=0.76 Score=38.41 Aligned_cols=221 Identities=8% Similarity=-0.051 Sum_probs=97.7
Q ss_pred CeEEEEecCCcE--EEeecCCCCCCeEEEEeeCeEEE-EEc---------CCeEEEEeccceeeeeec---ccCccEEEE
Q psy14906 53 KAFHVYGCNHFK--LLSVSPQHEDDITCLSSDFFHIY-TSA---------NNIIYAWRRGIDIVGTYK---GHTSPVHLI 117 (583)
Q Consensus 53 ~~i~v~d~~~~~--~~~~~~~h~~~v~~~~~~~~~~~-~~~---------~~~i~vw~~~~~~~~~~~---~h~~~v~~i 117 (583)
+.+.+||+++.+ .+..++.....-.++..++++++ ++. -..+.+||........+. .-...-.+.
T Consensus 19 ~~~~~yd~~t~~W~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~w~~~~~~p~~r~~~~~~ 98 (288)
T d1zgka1 19 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVG 98 (288)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEE
T ss_pred ceEEEEECCCCeEEECCCCCCccceeEEEEECCEEEEEeCcccCCCCccccchhhhcccccccccccccccceecceecc
Confidence 368899999864 44334432323334444665444 332 125677886433333222 111111122
Q ss_pred ccCCCEEEEEeCCC-----cEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecC-----CeEE
Q psy14906 118 LPFGPHLISVDEES-----NVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSN-----KKII 187 (583)
Q Consensus 118 s~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----~~i~ 187 (583)
..+++.++.++.++ ....+|..+.......... ........+.. ++..++.|+.+ ..+.
T Consensus 99 ~~~~~i~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~r~~~~~~~~--~~~~~~~GG~~~~~~~~~~~ 167 (288)
T d1zgka1 99 VIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPML---------TRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAE 167 (288)
T ss_dssp EETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCS---------SCCBSCEEEEE--TTEEEEECCBCSSCBCCCEE
T ss_pred ccceeeEEecceecccccceeeeeccccCccccccccc---------cccccceeeee--eecceEecCcccccccceEE
Confidence 34555555554433 3445666665432211110 11111112222 34455555443 4577
Q ss_pred EEEccCCceeEEEeccCC-CeEEEEEecCCCCEEEEEcCC-----CcEEEEeCCCCeehhhhhhccccce-EEEEEecCC
Q psy14906 188 LHNILTDESLMEFIQTWG-PVTALSFRTDGPPMMVSGSNT-----GHLTVWNLEDRQVENQIKKAHRKVV-TGAHFLYNE 260 (583)
Q Consensus 188 iw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~v-~~~~~~~~~ 260 (583)
.||..+++....-..... .-.++.. .++. +++.|+.+ .....+|..+.+....- ....... .+++ ..++
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~-i~i~GG~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~~~~-~~~~ 243 (288)
T d1zgka1 168 CYYPERNEWRMITAMNTIRSGAGVCV-LHNC-IYAAGGYDGQDQLNSVERYDVETETWTFVA-PMKHRRSALGIT-VHQG 243 (288)
T ss_dssp EEETTTTEEEECCCCSSCCBSCEEEE-ETTE-EEEECCBCSSSBCCCEEEEETTTTEEEECC-CCSSCCBSCEEE-EETT
T ss_pred Eeeccccccccccccccccccccccc-eeee-EEEecCccccccccceeeeeecceeeeccc-CccCcccceEEE-EECC
Confidence 888776543322111111 1122222 2344 66666544 34677887765543321 1111111 1222 2367
Q ss_pred CEEEEEeCCC-----eEEEEEccCCCCCceeeEEe
Q psy14906 261 PLLVTSSPDN-----TLKLWIFDKADGNGRLLRIR 290 (583)
Q Consensus 261 ~~l~s~~~d~-----~i~~w~~~~~~~~~~~~~~~ 290 (583)
++++.|+.++ .+.+||+ .......+..+
T Consensus 244 ~l~v~GG~~~~~~~~~v~~yd~--~~~~W~~~~~~ 276 (288)
T d1zgka1 244 RIYVLGGYDGHTFLDSVECYDP--DTDTWSEVTRM 276 (288)
T ss_dssp EEEEECCBCSSCBCCEEEEEET--TTTEEEEEEEC
T ss_pred EEEEEecCCCCeecceEEEEEC--CCCEEEECCCC
Confidence 7888777543 3556644 33344554443
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.03 E-value=0.97 Score=39.35 Aligned_cols=140 Identities=9% Similarity=0.007 Sum_probs=82.5
Q ss_pred CeEEEEeeCeEEEEEcCCeEEEEeccc-eeeeeecccCccEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCc
Q psy14906 75 DITCLSSDFFHIYTSANNIIYAWRRGI-DIVGTYKGHTSPVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDT 153 (583)
Q Consensus 75 ~v~~~~~~~~~~~~~~~~~i~vw~~~~-~~~~~~~~h~~~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 153 (583)
.|..+++++..++...++.+..++... ........-..++..+.+....++....+|.+.++++..+....... ....
T Consensus 88 ~v~~vafs~d~l~v~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~~~l~~~~~~~~~~-~v~~ 166 (381)
T d1xipa_ 88 DVIFVCFHGDQVLVSTRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQLAQ-NVTS 166 (381)
T ss_dssp TEEEEEEETTEEEEEESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEE-SEEE
T ss_pred CeEEEEeeCCEEEEEeCCCEEEEEeeccccccccccccccccceecCCceeEEEecCCCEEEEEeccCccccccC-Ccce
Confidence 588999988888888888888888532 11222223355677776777778888889999999999876432211 0000
Q ss_pred eEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEE-EccCCceeEEEeccCCCeEEEEEecCCCCEEEE
Q psy14906 154 FKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILH-NILTDESLMEFIQTWGPVTALSFRTDGPPMMVS 222 (583)
Q Consensus 154 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s 222 (583)
....+.+.+++|++.|..++++..+ ...+- ++.....+.........|.+|.|..+.. ++++
T Consensus 167 -----~~~~~~~~~v~ws~kgkq~v~~~g~-~~q~k~~i~~~~~~~~p~~~~~~v~sI~WL~~~~-F~vv 229 (381)
T d1xipa_ 167 -----FDVTNSQLAVLLKDRSFQSFAWRNG-EMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD-FLAV 229 (381)
T ss_dssp -----EEECSSEEEEEETTSCEEEEEEETT-EEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE-EEEE
T ss_pred -----EEecCCceEEEEeCCcEEEEEeCCC-ceeeccCCCCccccCCCcCCCcceeEEEEecCce-EEEE
Confidence 0334667788888888777776332 12111 1111111100011235688999987765 4433
|
| >d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Acylamino-acid-releasing enzyme, N-terminal donain domain: Acylamino-acid-releasing enzyme, N-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=94.96 E-value=0.57 Score=36.22 Aligned_cols=228 Identities=13% Similarity=0.140 Sum_probs=119.5
Q ss_pred CCCEEEEEecCCeEEEEEccCCceeEEEeccCCCeEEEEEecCCC-CEEE-E-----EcCCCcEEEEeCCCCeehhhhhh
Q psy14906 173 VVDIIGVGLSNKKIILHNILTDESLMEFIQTWGPVTALSFRTDGP-PMMV-S-----GSNTGHLTVWNLEDRQVENQIKK 245 (583)
Q Consensus 173 ~~~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~-s-----~~~dg~i~vwd~~~~~~~~~~~~ 245 (583)
+.++|+++...|.+.++-+..++.+..-+ .+|.... .|... .++. . |-.-..+.+-++...-....+..
T Consensus 25 ~d~ll~~~~seG~vni~~l~g~~~vkLtk---ePI~~~~-~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~~i~s 100 (313)
T d2hu7a1 25 GDKLLVVGFSEGSVNAYLYDGGETVKLNR---EPINSVL-DPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEA 100 (313)
T ss_dssp TTEEEEEEEETTEEEEEEESSSSCEECCS---SCCSEEC-EECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCEEECTT
T ss_pred CCcEEEEEeccceEEEEEEeCCEEEEEec---ccccCcC-CCccCcceEEEEeehhcCcceeeEEEEccCCCCeeeEecC
Confidence 34477888889999999887666554322 2332221 12111 0111 1 11122344445442111222211
Q ss_pred ccccceEEEEEecCCCEEEEEeCCCeEEEEEccCCCCCceeeEEeccC-------CCCCeeEEEeeCCCCEEEEeeC-CC
Q psy14906 246 AHRKVVTGAHFLYNEPLLVTSSPDNTLKLWIFDKADGNGRLLRIREGH-------SAPPNYIQFYGNSSDNILSAAG-DS 317 (583)
Q Consensus 246 ~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~l~~~~~-dg 317 (583)
...-.|.++++. +.+..++|+......+|-++. +..+.+..+.+. ...|..+.+...+..-++++.- .|
T Consensus 101 pk~vRI~S~~yd-dk~vvF~Gased~~~LYvieg--GklrkL~~vPpFsFVtDI~~d~I~G~g~~~g~~~sfF~adl~SG 177 (313)
T d2hu7a1 101 VKPMRILSGVDT-GEAVVFTGATEDRVALYALDG--GGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSG 177 (313)
T ss_dssp SCSBEEEEEEEC-SSCEEEEEECSSCEEEEEEET--TEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTTE
T ss_pred CceEEEEEeeec-CceEEEecccCCceEEEEEeC--CceeeeccCCCcceEEeccCCeEEEEeeecCCcceEEEEecccC
Confidence 122356666653 456777888777788886653 233444443332 2345555555434444666665 88
Q ss_pred cEEEEEccccccceeeccchhhhhhhhhhcchhccccccCCCccceeeeecccccccccEEEEe---cCCceEEEeecCc
Q psy14906 318 TLRIFNTKSETSNKNLGIASANRNNLKRKNRLEKMNEKFILPPVSQFSFGLAREKDWNNIAAIH---TGKNKVSLWSFYK 394 (583)
Q Consensus 318 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~ 394 (583)
.+++++...+......-.. . +.+ +.. .+......+|+..
T Consensus 178 ~lri~tpkeGS~~~ay~~~-----------------------g--------------nKV-~sdyEt~gEsywit~D~~s 219 (313)
T d2hu7a1 178 GLRVFDSGEGSFSSASISP-----------------------G--------------MKV-TAGLETAREARLVTVDPRD 219 (313)
T ss_dssp EEEEECCSSEEEEEEEECT-----------------------T--------------SCE-EEEEEESSCEEEEEECTTT
T ss_pred CEEEecCCCCcccceeEcc-----------------------C--------------cee-eeccCCCCceEEEEEeccc
Confidence 9999988776543322100 0 011 111 1112222445555
Q ss_pred ccccceeeecccccccCCCCceEEEEccCCcEEEEEecCceEEEEEcccCccc
Q psy14906 395 SKMDDMFLVPERCKQAKQSKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHR 447 (583)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 447 (583)
+......+....+.......|+-+-+.|++++++++-.||.=.+|. +|+.+
T Consensus 220 ~~yerve~P~kd~~sy~p~~I~~~~Y~Pdd~L~iiakrdG~s~lF~--nGk~i 270 (313)
T d2hu7a1 220 GSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFI--DGERV 270 (313)
T ss_dssp CCEEECCCSSCHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEE--TTEEE
T ss_pred CceeeeecCcccceeecceEEEeeeeCCCCcEEEEEecCCchheee--cceEe
Confidence 5544444444444444345566677999999999999999988887 45554
|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: beta-lactamase inhibitor protein-II, BLIP-II domain: beta-lactamase inhibitor protein-II, BLIP-II species: Streptomyces exfoliatus [TaxId: 1905]
Probab=94.39 E-value=1.1 Score=37.25 Aligned_cols=210 Identities=12% Similarity=0.044 Sum_probs=102.0
Q ss_pred CCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEEeeCeEEEEEcCCeEEEEeccce-eeeeecccCccEEEEccC
Q psy14906 42 RKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLSSDFFHIYTSANNIIYAWRRGID-IVGTYKGHTSPVHLILPF 120 (583)
Q Consensus 42 ~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~i~vw~~~~~-~~~~~~~h~~~v~~is~~ 120 (583)
+..+.++.. ++.|..|-.+..-++..-......|..++.......+-.|+.+..|..... ...........+..+...
T Consensus 34 G~~h~~al~-dG~v~~wG~N~~GQlG~~~~~~~~v~~v~~G~~~~~al~dg~v~~wG~~~~gq~~~~~~~~~~~~~i~~~ 112 (273)
T d1jtdb_ 34 GYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLALKDGEVIAWGGNEDGQTTVPAEARSGVDAIAAG 112 (273)
T ss_dssp CSSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSCCCEEEECSSEEEEEETTEEEEEECCTTSTTCCCGGGGSSCCEEEEE
T ss_pred cCCEEEEEE-CCEEEEEeCCCCCceeeeecccccceEEecCCCceeeeeeeeeeccCCCcceeeccccccccceeEEeee
Confidence 334444444 789999987664333322334556777776333222335899999985321 111111112233344333
Q ss_pred CCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEccCCceeEEE
Q psy14906 121 GPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNILTDESLMEF 200 (583)
Q Consensus 121 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~~~~~~~~~ 200 (583)
....+.. .|+.+..|............ .....|..++-. ...++ ...++.+..|-..........
T Consensus 113 ~~~~~~~-~dg~v~~~g~~~~~~~~~~~-----------~~~~~v~~~~~~--~~~~~-~~~~g~~~~~G~~~~g~~~~~ 177 (273)
T d1jtdb_ 113 AWASYAL-KDGKVIAWGDDSDGQTTVPA-----------EAQSGVTALDGG--VYTAL-AVKNGGVIAWGDNYFGQTTVP 177 (273)
T ss_dssp TTEEEEE-ETTEEEEEECCTTSTTSCCG-----------GGGSSEEEEEEC--SSEEE-EEETTEEEEEECCTTSTTSCC
T ss_pred ccccccc-ccccceecccCCCCceeeec-----------cCCceEEEEecc--ceeee-eecccceeEeecccCCccccc
Confidence 3333333 48889999754322111000 112334443322 22222 345788888865433222222
Q ss_pred eccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhhhccccceEEEEEecCCCEEEEEeCCCeEEEE
Q psy14906 201 IQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTSSPDNTLKLW 275 (583)
Q Consensus 201 ~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~w 275 (583)
......|..++..... .+.-. ||.|..|=....-.+... ......|..++-... ..++. .|+.|..|
T Consensus 178 ~~~~~~v~~Is~G~~h---~~~l~-dG~v~~WG~n~~Gql~~~-~~~~~~v~~I~~G~~-~~~~l--~~g~v~~W 244 (273)
T d1jtdb_ 178 AEAQSGVDDVAGGIFH---SLALK-DGKVIAWGDNRYKQTTVP-TEALSGVSAIASGEW-YSLAL--KNGKVIAW 244 (273)
T ss_dssp GGGSSSEEEEEECSSE---EEEEE-TTEEEEEECCTTSTTCCC-GGGGSSCCEEEECSS-CEEEE--ETTEEEEE
T ss_pred ccccCCccceecccee---eEEEe-cCcEEEcCCCCCCccCCC-ccCCCCcEEEEeCcc-eEEEE--ECCEEEEE
Confidence 2333567777654332 22223 789999965432211111 122345666664332 23333 38999999
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.25 E-value=0.52 Score=39.52 Aligned_cols=22 Identities=23% Similarity=0.383 Sum_probs=15.9
Q ss_pred CCcEEEEeecCCc-----EEEEEccCC
Q psy14906 470 LNQIVISGGNDQT-----VKVWHFKQT 491 (583)
Q Consensus 470 ~~~~l~s~~~dg~-----i~iwd~~~~ 491 (583)
++++++.|+.++. +.+||+.+.
T Consensus 242 ~~~l~v~GG~~~~~~~~~v~~yd~~~~ 268 (288)
T d1zgka1 242 QGRIYVLGGYDGHTFLDSVECYDPDTD 268 (288)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCEEEEEecCCCCeecceEEEEECCCC
Confidence 6788888876543 677888765
|
| >d1crua_ b.68.2.1 (A:) Soluble quinoprotein glucose dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Soluble quinoprotein glucose dehydrogenase family: Soluble quinoprotein glucose dehydrogenase domain: Soluble quinoprotein glucose dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=92.20 E-value=3.8 Score=36.70 Aligned_cols=58 Identities=17% Similarity=0.206 Sum_probs=40.5
Q ss_pred CCceEEEEccCCcEEEEEecCceEEEEEcccCccccccCCC--C-CCCcccCeeEEEEeCC
Q psy14906 413 SKPTCVYITHCGNFVLIGYSSGHVDRFNIQSGAHRGSYGHD--N-QPGHVGGVRGVVSDNL 470 (583)
Q Consensus 413 ~~i~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~-~~~h~~~v~~~~~s~~ 470 (583)
....+|+|.|||+++++--..|.|++++..++......... . ...-+.....|+|+|+
T Consensus 27 ~~P~~la~~pdg~llVter~~G~i~~v~~~~g~~~~i~~~~~~~~~~~ge~GLLgia~~Pd 87 (450)
T d1crua_ 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (450)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEeCCCeEEEEEecCCEEEEEECCCCcEeecccCCccccccCCCCceeeEEeCCC
Confidence 56889999999998887656799999987776543222111 0 0223457889999985
|
| >d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: Serum paraoxonase/arylesterase 1, PON1 domain: Serum paraoxonase/arylesterase 1, PON1 species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=91.52 E-value=3.7 Score=35.10 Aligned_cols=140 Identities=11% Similarity=0.048 Sum_probs=80.4
Q ss_pred ccCCC-EEEEEe---CCCcEEEEEcCCCc--EEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEec---------
Q psy14906 118 LPFGP-HLISVD---EESNVKVWDIKAEE--TYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLS--------- 182 (583)
Q Consensus 118 s~~~~-~l~s~~---~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--------- 182 (583)
..+|+ +|++.. ...+|.++++.... ....-.... ......+.+++..++..+++-..
T Consensus 107 ~~dg~~~L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~--------~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~ 178 (340)
T d1v04a_ 107 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRH--------KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKS 178 (340)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECC--------TTCSSEEEEEEEETTEEEEEESCSCCSHHHHH
T ss_pred cCCCcEEEEEEeccCCCceeEEEEEeCCCCeEEEEeecCC--------ccccCccceEEecCCCEEEecCccCcChhhhh
Confidence 45666 455553 34678888876433 222211110 22355788888888988887310
Q ss_pred ------CCeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcCCCcEEEEeCCCCeehhhhh-hccccceEEEE
Q psy14906 183 ------NKKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSNTGHLTVWNLEDRQVENQIK-KAHRKVVTGAH 255 (583)
Q Consensus 183 ------d~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~v~~~~ 255 (583)
-+...+|....++......+- ...+.|+++||++.++++-+..+.|++|++.....+.... ..-....-.+.
T Consensus 179 ~e~~~~~~~g~v~~~~~~~~~~~~~~l-~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~~~~~l~~~~~~~l~~~pDNi~ 257 (340)
T d1v04a_ 179 WEMHLGLAWSFVTYYSPNDVRVVAEGF-DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNIS 257 (340)
T ss_dssp HHHHTTCCCEEEEEECSSCEEEEEEEE-SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEE
T ss_pred hhHhhcCCceeEEEEcCCceEEEcCCC-CccceeEECCCCCEEEEEeCCCCeEEEEEeCCCcccceEEEecCCCCCCccE
Confidence 123445555444433333333 6789999999998677777888999999987543221110 11233455667
Q ss_pred Eec-CCCEEEEE
Q psy14906 256 FLY-NEPLLVTS 266 (583)
Q Consensus 256 ~~~-~~~~l~s~ 266 (583)
+.+ +|.+.+.+
T Consensus 258 ~d~~~g~lwva~ 269 (340)
T d1v04a_ 258 VDPVTGDLWVGC 269 (340)
T ss_dssp ECTTTCCEEEEE
T ss_pred EecCCCEEEEEE
Confidence 765 44444443
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.92 E-value=4.5 Score=35.00 Aligned_cols=137 Identities=8% Similarity=0.019 Sum_probs=79.6
Q ss_pred cEEEEccCCCEEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEEecCCeEEEEEcc
Q psy14906 113 PVHLILPFGPHLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVGLSNKKIILHNIL 192 (583)
Q Consensus 113 ~v~~is~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d~~i~iw~~~ 192 (583)
.|..++-++..|+... ++.+..++...-....... ....++..+.++|. .++....++.+.++++.
T Consensus 88 ~v~~vafs~d~l~v~~-~~~l~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~p~--~~~l~~~~~~~~~~~l~ 153 (381)
T d1xipa_ 88 DVIFVCFHGDQVLVST-RNALYSLDLEELSEFRTVT-----------SFEKPVFQLKNVNN--TLVILNSVNDLSALDLR 153 (381)
T ss_dssp TEEEEEEETTEEEEEE-SSEEEEEESSSTTCEEEEE-----------ECSSCEEEEEECSS--EEEEEETTSEEEEEETT
T ss_pred CeEEEEeeCCEEEEEe-CCCEEEEEeeccccccccc-----------cccccccceecCCc--eeEEEecCCCEEEEEec
Confidence 4666655666666654 5667778877644444433 44567888888774 56667788999999998
Q ss_pred CCceeEEEe-----ccCCCeEEEEEecCCCCEEEEEcCCCcEEEE-eCCCCeehhhhhhccccceEEEEEecCCCEEEEE
Q psy14906 193 TDESLMEFI-----QTWGPVTALSFRTDGPPMMVSGSNTGHLTVW-NLEDRQVENQIKKAHRKVVTGAHFLYNEPLLVTS 266 (583)
Q Consensus 193 ~~~~~~~~~-----~~~~~v~~~~~~~~~~~~l~s~~~dg~i~vw-d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 266 (583)
.++...... .-.+.+.+++|++.|. .++++..+ ...+- ++.....+... ......|.++.|..+..++++-
T Consensus 154 ~~~~~~~~~~v~~~~~~~~~~~v~ws~kgk-q~v~~~g~-~~q~k~~i~~~~~~~~p-~~~~~~v~sI~WL~~~~F~vvy 230 (381)
T d1xipa_ 154 TKSTKQLAQNVTSFDVTNSQLAVLLKDRSF-QSFAWRNG-EMEKQFEFSLPSELEEL-PVEEYSPLSVTILSPQDFLAVF 230 (381)
T ss_dssp TCCEEEEEESEEEEEECSSEEEEEETTSCE-EEEEEETT-EEEEEEEECCCHHHHTS-CTTTSEEEEEEESSSSEEEEEE
T ss_pred cCccccccCCcceEEecCCceEEEEeCCcE-EEEEeCCC-ceeeccCCCCccccCCC-cCCCcceeEEEEecCceEEEEE
Confidence 775433221 1125677888887776 55665322 12211 12111111111 1234568899998776655544
|
| >d2hu7a1 b.69.7.2 (A:9-321) Acylamino-acid-releasing enzyme, N-terminal donain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Peptidase/esterase 'gauge' domain family: Acylamino-acid-releasing enzyme, N-terminal donain domain: Acylamino-acid-releasing enzyme, N-terminal donain species: Aeropyrum pernix [TaxId: 56636]
Probab=86.04 E-value=6.1 Score=30.45 Aligned_cols=215 Identities=12% Similarity=0.083 Sum_probs=115.3
Q ss_pred CCCceEEEEeeCCeEEEEecCCcEEEeecCCCCCCeEEEE-ee---CeEEEEE------cCCeEEEEecc--ceeeeeec
Q psy14906 41 RRKETLFVTCVGKAFHVYGCNHFKLLSVSPQHEDDITCLS-SD---FFHIYTS------ANNIIYAWRRG--IDIVGTYK 108 (583)
Q Consensus 41 ~~~~~~i~~~~~~~i~v~d~~~~~~~~~~~~h~~~v~~~~-~~---~~~~~~~------~~~~i~vw~~~--~~~~~~~~ 108 (583)
+++.+++++...+.+.++-+..++.++.- .++|.... +. ++++.+- ....|.+-++. ++..+.-.
T Consensus 24 ~~d~ll~~~~seG~vni~~l~g~~~vkLt---kePI~~~~~Pk~~ldfi~f~RDV~kGkE~Hai~~~Nlk~~GEE~~i~s 100 (313)
T d2hu7a1 24 DGDKLLVVGFSEGSVNAYLYDGGETVKLN---REPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEA 100 (313)
T ss_dssp TTTEEEEEEEETTEEEEEEESSSSCEECC---SSCCSEECEECTTBSEEEEEEECSTTSCCEEEEEEETTSTTCEEECTT
T ss_pred cCCcEEEEEeccceEEEEEEeCCEEEEEe---cccccCcCCCccCcceEEEEeehhcCcceeeEEEEccCCCCeeeEecC
Confidence 45555666668888888888877666532 33443322 21 1222221 11256666654 44333222
Q ss_pred ccCccEEEEccCCC-EEEEEeCCCcEEEEEcCCCcEEEEeeccCCceEEecccCCcceEEEeeCCCCCEEEEE----ecC
Q psy14906 109 GHTSPVHLILPFGP-HLISVDEESNVKVWDIKAEETYLELSFDNDTFKIMGKRWNSCVNVLEPSPVVDIIGVG----LSN 183 (583)
Q Consensus 109 ~h~~~v~~is~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~----~~d 183 (583)
...-+|.++..|++ ..++|+......+|-++.|+...-....+ -+-|+.+. +++++-- +..
T Consensus 101 pk~vRI~S~~yddk~vvF~Gased~~~LYviegGklrkL~~vPp----------FsFVtDI~----~d~I~G~g~~~g~~ 166 (313)
T d2hu7a1 101 VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG----------FGFVSDIR----GDLIAGLGFFGGGR 166 (313)
T ss_dssp SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS----------CEEEEEEE----TTEEEEEEEEETTE
T ss_pred CceEEEEEeeecCceEEEecccCCceEEEEEeCCceeeeccCCC----------cceEEecc----CCeEEEEeeecCCc
Confidence 23366777766665 55577778888999998887554433321 12222221 3333211 111
Q ss_pred CeEEEEEccCCceeEEEeccCCCeEEEEEecCCCCEEEEEcC----CCcEEEEeCCCCeeh------hhhhhccccceEE
Q psy14906 184 KKIILHNILTDESLMEFIQTWGPVTALSFRTDGPPMMVSGSN----TGHLTVWNLEDRQVE------NQIKKAHRKVVTG 253 (583)
Q Consensus 184 ~~i~iw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~----dg~i~vwd~~~~~~~------~~~~~~~~~~v~~ 253 (583)
....+-|+.+|. ++.|....+.++.....+..+ ++++-. ..-| -+|+++++.. +.+..-..-.|+.
T Consensus 167 ~sfF~adl~SG~-lri~tpkeGS~~~ay~~~gnK--V~sdyEt~gEsywi-t~D~~s~~yerve~P~kd~~sy~p~~I~~ 242 (313)
T d2hu7a1 167 VSLFTSNLSSGG-LRVFDSGEGSFSSASISPGMK--VTAGLETAREARLV-TVDPRDGSVEDLELPSKDFSSYRPTAITW 242 (313)
T ss_dssp EEEEEEETTTEE-EEEECCSSEEEEEEEECTTSC--EEEEEEESSCEEEE-EECTTTCCEEECCCSSCHHHHHCCSEEEE
T ss_pred ceEEEEecccCC-EEEecCCCCcccceeEccCce--eeeccCCCCceEEE-EEecccCceeeeecCcccceeecceEEEe
Confidence 123333443222 233444446666666777665 343321 2223 4477765422 2222223456777
Q ss_pred EEEecCCCEEEEEeCCCeEEEEE
Q psy14906 254 AHFLYNEPLLVTSSPDNTLKLWI 276 (583)
Q Consensus 254 ~~~~~~~~~l~s~~~d~~i~~w~ 276 (583)
+-+.|++++++.+-.||.-++|.
T Consensus 243 ~~Y~Pdd~L~iiakrdG~s~lF~ 265 (313)
T d2hu7a1 243 LGYLPDGRLAVVARREGRSAVFI 265 (313)
T ss_dssp EEECTTSCEEEEEEETTEEEEEE
T ss_pred eeeCCCCcEEEEEecCCchheee
Confidence 88999999989999999999993
|