Diaphorina citri psyllid: psy14915

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------
MSELTPDEIRQRRLAKLGAIANSARNDSSNSAQDMIGSSILFNSPSGRDDMIGSIGQKVNLGTSPMEIDKSVIKISEKPQAHGEPMEVEIEPVREIKIVKAPSMEITPQIIENTICKILSVTYSQVDASNTILYLPQVASVLTELKQNSVTITYQDLISQSLVELQDILLSKNNTCVLGHYTASYARVFEEERNNPKKCSIFPFKDVLYEVRTQLVRHSILVLQSTNSDPMSSPLVKPLINQTLPNGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYSKPLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFAEDDVKVGNHFFSSVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETMLGYLAALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLSFKNDTRLKMSSQEVEDWLASLSSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRRVRSLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNLMKKSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQYIPGIEDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFINESKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDDAADRMERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREKIEK
cccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccEEEcccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcHHHHccccccccccccHHHHHHccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccccHHHHHHHccccccccccccHHHHHHHHHcccccccccccccccccHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccHHHHHcHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHcccCEcccccEECHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHcc
****TPD*IRQR*********************************************************************************************ITPQIIENTICKILSVTYSQVDASNTILYLPQVASVLTELKQNSVTITYQDLISQSLVELQDILLSKNNTCVLGHYTASYARVFEEERNNPKKCSIFPFKDVLYEVRTQLVRHSILVLQSTNSDPMSSPLVKPLINQTLPNGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYSKPLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFAEDDVKVGNHFFSSVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETMLGYLAALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLSF*************EDWLASLSSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRRVRSLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNLMKKSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQYIPGIEDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFINESKTGNQFVKFVNMLMNDTTFLLDESLESLKRIH********************************QCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDDAADRMERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREK***
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MSELTPDEIRQRRLAKLGAIANSARNDSSNSAQDMIGSSILFNSPSGRDDMIGSIGQKVNLGTSPMEIDKSVIKISEKPQAHGEPMEVEIEPVREIKIVKAPSMEITPQIIENTICKILSVTYSQVDASNTILYLPQVASVLTELKQNSVTITYQDLISQSLVELQDILLSKNNTCVLGHYTASYARVFEEERNNPKKCSIFPFKDVLYEVRTQLVRHSILVLQSTNSDPMSSPLVKPLINQTLPNGFLSDFVCTLYEDEETFKQVMSPILQGVYKAMTEASIADPDYSKPLEALTDLLEIRIGSNVWPVCSALVSQVQFQPELNTKAVGREIAVTSYLGPFFSISVFAEDDVKVGNHFFSSVTDLNNKSIQATLQNGLQLTRGFLYRICHTMLRNNPTRETMLGYLAALVGHNEKRAQLQSEESTLAGDGFMLNLLAVFQALSDKIDLFKVDLMYPFHPNKSEMLSFKNDTRLKMSSQEVEDWLASLSSTAWREPKFSSTCWFLTLHCTHLSLLPALAKYQRRVRSLRDLQKLVDELSSTEETWRGTVIARRNKDFLKRWKHQIKKLSRSKACADAGLLDKNLMKKSAVFYMSVAEYLLRVMTGEENLCNITLPLPSTVRPEFAALPEWYVEDIAEFLLFALQYIPGIEDVVEDRCVTWLLVTMCSPQMIKNPYLLAKLIEVLFISNPDVQTRTSNLYDRIMAHKFSSQFLPSYLMKFYTDVETTGSSSEFYDKFTIRYHISLILKGMWESPIHRQAFINESKTGNQFVKFVNMLMNDTTFLLDESLESLKRIHETQELMRDEAAYAAIPAEQQLSRERQLAADERQCRSYLTLGRETVDMFHYLTVEIKEPFLRPELVYRLSAMLNFNLQQLCGPKCNHLKVSSPDKYGWDPRRLLNQLVDIYLHLDCDEFAAAIAQDERSFRKELFDDAADRMERRQILLPSSLDKFRALASRAHEISVANIKKEVDYNDAPDEFRDPLMDTLMEDPVTLPSGVVMDRSVIVRHLLNSSTDPFSRQPLFEDNLKPNEELKKKIEAWKREKIEK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable ubiquitin conjugation factor E4 Binds to the ubiquitin moieties of preformed conjugates and catalyzes ubiquitin chain assembly in conjunction with E1, E2, and E3.confidentQ09349
Ubiquitin conjugation factor E4 E4 ubiquitin chain-elongation enzyme specifically involved in polyubiquitin chain assembly. Binds to cdc48 and elongates mono- and diubiquitinated ERAD substrates presented by the ufd1-npl4-cdc48 (UNC) AAA ATPase complex to a chain length of 4 to 6 ubiquitin moieties. Delivers these polyubiquitinated substrates to downstream ERAD components, which target them to the proteasome. Enhances ubiquitination at 'Lys-48', but not at 'Lys-29' of the Ub moiety.confidentQ9HE05
Probable ubiquitin conjugation factor E4 confidentQ9LF41

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622
GO:0005634 [CC]nucleusprobableGO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0043229, GO:0044424, GO:0043227, GO:0043226
GO:0009411 [BP]response to UVprobableGO:0008150, GO:0009314, GO:0050896, GO:0009416, GO:0009628
GO:0006915 [BP]apoptotic processprobableGO:0010259, GO:0009987, GO:0012501, GO:0044763, GO:0008150, GO:0007569, GO:0044699
GO:0000151 [CC]ubiquitin ligase complexprobableGO:0043234, GO:0032991, GO:0044464, GO:0005623, GO:0005622, GO:0005575, GO:0044424
GO:0051865 [BP]protein autoubiquitinationprobableGO:0071704, GO:0044267, GO:0044238, GO:0044260, GO:0032446, GO:0019538, GO:0009987, GO:0070647, GO:0006464, GO:0043170, GO:0016567, GO:0043412, GO:0036211, GO:0008150, GO:0044237, GO:0008152
GO:0034450 [MF]ubiquitin-ubiquitin ligase activityprobableGO:0019787, GO:0016879, GO:0004842, GO:0016881, GO:0003824, GO:0003674, GO:0016874
GO:0000209 [BP]protein polyubiquitinationprobableGO:0071704, GO:0044267, GO:0044238, GO:0044260, GO:0032446, GO:0019538, GO:0009987, GO:0070647, GO:0006464, GO:0043170, GO:0016567, GO:0043412, GO:0036211, GO:0008150, GO:0044237, GO:0008152
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0042787 [BP]protein ubiquitination involved in ubiquitin-dependent protein catabolic processprobableGO:0044248, GO:0043632, GO:0044267, GO:1901575, GO:0044265, GO:0044260, GO:0071704, GO:0070647, GO:0032446, GO:0006508, GO:0044238, GO:0009987, GO:0019941, GO:0006464, GO:0043412, GO:0036211, GO:0008150, GO:0030163, GO:0008152, GO:0044257, GO:0009056, GO:0009057, GO:0051603, GO:0019538, GO:0044237, GO:0043170, GO:0016567, GO:0006511
GO:0048856 [BP]anatomical structure developmentprobableGO:0032502, GO:0008150

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3M62, chain A
Confidence level:very confident
Coverage over the Query: 110-1046
View the alignment between query and template
View the model in PyMOL