Diaphorina citri psyllid: psy15079


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70----
MTDAQVKTWFQNRRTKWRPFSFEGVSKSKHIVVRPLIDKVNLYVIEAVWTVLSALIDVNRWPVDQDFSNNQIDR
ccHHHHHHHHHHccccccccccccccccccEEcccEEcHHHHHHHHHHHHHHHHHHHccccccccccccccccc
***AQVKTWFQNRRTKWRPFSFEGVSKSKHIVVRPLIDKVNLYVIEAVWTVLSALIDVNRWPVDQDFS******
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MTDAQVKTWFQNRRTKWRPFSFEGVSKSKHIVVRPLIDKVNLYVIEAVWTVLSALIDVNRWPVDQDFSNNQIDR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
T-cell leukemia homeobox protein 2 Transcription activator that binds DNA elements with the consensus sequence 5'-CGGTAATTGG-3'. Binds DNA via its homeobox. Required for normal cell death of enteric neurons in the gastrointestinal tract. Required for normal development of the enteric nervous system, and for proper development of normal motility of the gastrointestinal tract.confidentQ61663
T-cell leukemia homeobox protein 2 Transcription activator that binds DNA elements with the consensus sequence 5'-CGGTAATTGG-3'. Binds DNA via its homeobox. Required for normal cell death of enteric neurons in the gastrointestinal tract. Required for normal development of the enteric nervous system, and for proper development of normal motility of the gastrointestinal tract.confidentO43763

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0050774 [BP]negative regulation of dendrite morphogenesisprobableGO:0022604, GO:0044707, GO:0051239, GO:0022603, GO:0030154, GO:0051129, GO:0051128, GO:0060284, GO:0031345, GO:0031344, GO:0044699, GO:0050767, GO:0048869, GO:0050768, GO:0050789, GO:0045664, GO:0010769, GO:0065007, GO:0010721, GO:0048519, GO:0032502, GO:0032501, GO:0050793, GO:0009987, GO:0050794, GO:0045596, GO:0045595, GO:0044763, GO:0010975, GO:0048731, GO:0022008, GO:0051093, GO:0048699, GO:0007399, GO:0050773, GO:0048856, GO:0051960, GO:2000026, GO:0048814, GO:0007275, GO:0008150, GO:0048523
GO:0005737 [CC]cytoplasmprobableGO:0044424, GO:0005575, GO:0044464, GO:0005623, GO:0005622

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3A01, chain A
Confidence level:very confident
Coverage over the Query: 1-17
View the alignment between query and template
View the model in PyMOL